Query 022620
Match_columns 294
No_of_seqs 230 out of 1881
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 04:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022620.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022620hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.1E-73 2.5E-78 486.1 15.9 264 31-294 39-303 (303)
2 KOG0373 Serine/threonine speci 100.0 2.3E-67 5E-72 441.3 16.7 283 12-294 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 3.6E-64 7.7E-69 456.4 28.3 278 14-294 25-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.6E-63 3.4E-68 449.6 27.4 262 14-278 24-285 (285)
5 PTZ00480 serine/threonine-prot 100.0 2.7E-63 5.8E-68 452.0 27.4 273 17-293 44-318 (320)
6 cd07420 MPP_RdgC Drosophila me 100.0 1.3E-62 2.8E-67 448.2 27.6 261 14-275 29-321 (321)
7 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.3E-61 2.7E-66 442.4 26.8 247 33-280 58-307 (316)
8 PTZ00244 serine/threonine-prot 100.0 1.4E-61 3E-66 438.1 26.3 259 14-276 34-293 (294)
9 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.3E-61 2.7E-66 438.8 25.7 260 14-277 32-292 (293)
10 smart00156 PP2Ac Protein phosp 100.0 2.2E-61 4.8E-66 433.9 26.4 263 11-277 7-270 (271)
11 KOG0371 Serine/threonine prote 100.0 7.9E-63 1.7E-67 422.4 15.9 294 1-294 7-319 (319)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 4.2E-61 9.1E-66 438.0 27.7 263 13-280 24-300 (305)
13 KOG0374 Serine/threonine speci 100.0 3.9E-61 8.5E-66 439.2 21.6 247 31-277 55-303 (331)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.7E-59 1.7E-63 424.8 26.6 260 14-276 30-311 (311)
15 cd07418 MPP_PP7 PP7, metalloph 100.0 6.3E-58 1.4E-62 423.2 26.9 266 15-280 45-370 (377)
16 KOG0375 Serine-threonine phosp 100.0 9.6E-55 2.1E-59 387.3 10.6 256 20-280 76-345 (517)
17 KOG0377 Protein serine/threoni 100.0 1.1E-48 2.3E-53 356.1 10.9 272 9-281 116-436 (631)
18 KOG0376 Serine-threonine phosp 100.0 2.2E-41 4.7E-46 314.3 13.8 250 31-281 210-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 3.7E-36 8E-41 263.4 22.8 214 38-262 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 2.9E-29 6.2E-34 223.1 20.4 192 35-267 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 3.2E-29 6.9E-34 217.5 15.0 177 38-248 1-197 (208)
22 PRK00166 apaH diadenosine tetr 100.0 2.8E-28 6.1E-33 219.3 18.0 220 35-267 1-262 (275)
23 cd07423 MPP_PrpE Bacillus subt 100.0 1.5E-27 3.3E-32 210.8 19.5 202 35-267 1-223 (234)
24 cd07413 MPP_PA3087 Pseudomonas 100.0 8.4E-28 1.8E-32 210.7 17.1 116 38-156 2-143 (222)
25 PHA02239 putative protein phos 100.0 2.1E-27 4.5E-32 209.4 17.5 175 35-250 1-221 (235)
26 TIGR00668 apaH bis(5'-nucleosy 100.0 8.9E-28 1.9E-32 214.4 14.7 133 35-171 1-139 (279)
27 PRK11439 pphA serine/threonine 100.0 2E-27 4.3E-32 207.9 16.6 180 33-250 15-208 (218)
28 cd07421 MPP_Rhilphs Rhilph pho 100.0 6.6E-27 1.4E-31 209.1 18.8 200 35-265 2-293 (304)
29 cd07422 MPP_ApaH Escherichia c 99.9 3.5E-27 7.5E-32 210.1 14.5 123 37-163 1-129 (257)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 1.9E-25 4E-30 193.9 19.7 190 35-260 1-204 (207)
31 PRK09968 serine/threonine-spec 99.9 4.2E-24 9.1E-29 186.8 18.5 181 33-250 13-208 (218)
32 PF00149 Metallophos: Calcineu 99.5 1.5E-13 3.4E-18 111.8 12.1 160 35-229 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.5 6.8E-13 1.5E-17 109.5 15.7 59 36-106 1-59 (155)
34 PRK09453 phosphodiesterase; Pr 99.5 6.3E-13 1.4E-17 113.0 15.7 69 35-107 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.5 1.1E-12 2.4E-17 108.8 13.9 63 35-106 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.4 3.7E-12 8E-17 104.5 13.1 136 35-246 1-136 (156)
37 cd07379 MPP_239FB Homo sapiens 99.4 5.7E-12 1.2E-16 101.8 10.2 118 36-234 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.3 1.1E-10 2.3E-15 102.8 14.1 157 36-230 2-208 (238)
39 cd07388 MPP_Tt1561 Thermus the 99.2 9.7E-10 2.1E-14 96.3 16.3 71 35-106 5-75 (224)
40 cd07392 MPP_PAE1087 Pyrobaculu 99.2 2.7E-10 5.9E-15 96.2 11.4 66 37-108 1-67 (188)
41 cd07394 MPP_Vps29 Homo sapiens 99.1 4E-09 8.7E-14 89.4 16.0 59 36-106 1-65 (178)
42 PRK05340 UDP-2,3-diacylglucosa 99.0 6.7E-09 1.5E-13 92.1 13.6 215 35-275 1-239 (241)
43 cd07399 MPP_YvnB Bacillus subt 99.0 1.5E-08 3.3E-13 88.3 14.9 193 36-276 2-213 (214)
44 cd00838 MPP_superfamily metall 99.0 5.6E-09 1.2E-13 81.8 10.9 117 38-234 1-119 (131)
45 cd07403 MPP_TTHA0053 Thermus t 98.9 1.4E-08 3.1E-13 81.5 10.9 107 38-234 1-107 (129)
46 cd07404 MPP_MS158 Microscilla 98.9 2.9E-09 6.4E-14 88.8 7.2 67 37-106 1-68 (166)
47 cd07400 MPP_YydB Bacillus subt 98.9 3.3E-08 7.2E-13 80.3 12.6 117 37-234 1-129 (144)
48 COG0622 Predicted phosphoester 98.9 1E-07 2.3E-12 80.1 15.3 159 35-277 2-166 (172)
49 COG2129 Predicted phosphoester 98.9 3E-07 6.4E-12 79.4 17.5 193 34-275 3-225 (226)
50 TIGR03729 acc_ester putative p 98.8 2.3E-08 4.9E-13 88.6 9.4 68 36-106 1-74 (239)
51 PRK11340 phosphodiesterase Yae 98.8 5.4E-08 1.2E-12 87.9 11.7 73 32-106 47-125 (271)
52 cd07395 MPP_CSTP1 Homo sapiens 98.7 1.6E-06 3.5E-11 77.6 18.5 70 35-106 5-99 (262)
53 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 4.3E-08 9.2E-13 86.5 7.3 68 37-106 1-81 (231)
54 cd07402 MPP_GpdQ Enterobacter 98.6 1.2E-07 2.6E-12 83.5 8.8 67 36-106 1-83 (240)
55 COG0639 ApaH Diadenosine tetra 98.6 1.1E-07 2.4E-12 76.4 7.3 141 110-251 5-154 (155)
56 cd07396 MPP_Nbla03831 Homo sap 98.6 2.4E-06 5.1E-11 77.0 15.1 72 36-107 2-87 (267)
57 PRK04036 DNA polymerase II sma 98.5 2.4E-06 5.3E-11 83.6 14.8 73 33-107 242-344 (504)
58 cd07383 MPP_Dcr2 Saccharomyces 98.5 1.7E-06 3.8E-11 74.3 12.1 70 35-104 3-87 (199)
59 cd07385 MPP_YkuE_C Bacillus su 98.5 2.3E-07 4.9E-12 80.8 6.4 71 35-107 2-77 (223)
60 cd07393 MPP_DR1119 Deinococcus 98.5 1.3E-06 2.9E-11 77.0 11.1 65 37-105 1-83 (232)
61 PRK11148 cyclic 3',5'-adenosin 98.5 1.7E-05 3.7E-10 71.6 18.0 72 33-106 13-98 (275)
62 cd07398 MPP_YbbF-LpxH Escheric 98.2 1.5E-06 3.2E-11 75.3 4.6 28 207-234 178-205 (217)
63 COG2908 Uncharacterized protei 98.2 9.7E-06 2.1E-10 70.7 9.4 201 38-269 1-230 (237)
64 TIGR00619 sbcd exonuclease Sbc 98.1 5.8E-06 1.2E-10 74.0 7.1 72 35-106 1-88 (253)
65 cd08165 MPP_MPPE1 human MPPE1 98.1 2.2E-05 4.7E-10 65.1 9.7 47 60-106 37-89 (156)
66 cd07401 MPP_TMEM62_N Homo sapi 98.1 2.9E-05 6.3E-10 69.5 10.6 70 37-106 2-89 (256)
67 PF06874 FBPase_2: Firmicute f 98.1 0.0001 2.2E-09 72.3 14.4 72 206-278 507-587 (640)
68 COG1409 Icc Predicted phosphoh 98.0 0.00055 1.2E-08 61.5 18.3 74 35-110 1-82 (301)
69 PHA02546 47 endonuclease subun 98.0 1.4E-05 3E-10 74.6 6.8 72 35-106 1-89 (340)
70 PF14582 Metallophos_3: Metall 97.9 3.6E-05 7.8E-10 66.7 6.9 73 34-107 5-103 (255)
71 cd00839 MPP_PAPs purple acid p 97.9 2.8E-05 6E-10 70.6 6.7 71 34-108 4-83 (294)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.9 2.6E-05 5.6E-10 67.6 6.1 72 36-108 1-91 (223)
73 cd07390 MPP_AQ1575 Aquifex aeo 97.9 2.9E-05 6.3E-10 65.0 6.0 67 37-108 1-84 (168)
74 cd07391 MPP_PF1019 Pyrococcus 97.9 4.9E-05 1.1E-09 63.9 7.2 57 50-107 30-89 (172)
75 TIGR00024 SbcD_rel_arch putati 97.8 6.3E-05 1.4E-09 66.1 7.2 69 35-107 15-103 (225)
76 TIGR00583 mre11 DNA repair pro 97.8 6.3E-05 1.4E-09 71.6 7.7 55 33-87 2-68 (405)
77 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.8 6.6E-05 1.4E-09 67.5 7.3 70 37-106 1-86 (262)
78 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00061 1.3E-08 56.1 9.7 119 38-229 1-121 (150)
79 PRK10966 exonuclease subunit S 97.5 0.00017 3.6E-09 68.9 6.3 72 35-107 1-88 (407)
80 cd07386 MPP_DNA_pol_II_small_a 97.5 0.00022 4.9E-09 63.2 5.9 68 38-107 2-95 (243)
81 cd08163 MPP_Cdc1 Saccharomyces 97.5 0.0099 2.1E-07 53.3 16.4 31 205-237 203-233 (257)
82 COG1408 Predicted phosphohydro 97.4 0.00032 7E-09 63.7 6.8 73 33-107 43-119 (284)
83 COG4186 Predicted phosphoester 97.2 0.0015 3.2E-08 53.5 6.9 67 36-106 5-86 (186)
84 COG3855 Fbp Uncharacterized pr 97.1 0.0033 7.2E-08 59.6 9.3 42 62-108 191-232 (648)
85 cd08166 MPP_Cdc1_like_1 unchar 97.0 0.0014 3E-08 56.2 5.4 48 59-106 40-93 (195)
86 cd00845 MPP_UshA_N_like Escher 97.0 0.0014 3.1E-08 58.1 5.7 66 36-106 2-82 (252)
87 cd07384 MPP_Cdc1_like Saccharo 96.9 0.002 4.3E-08 54.2 5.4 50 58-107 42-101 (171)
88 cd00842 MPP_ASMase acid sphing 96.8 0.0094 2E-07 54.2 10.2 72 37-108 40-124 (296)
89 COG0420 SbcD DNA repair exonuc 96.8 0.0034 7.3E-08 59.6 7.2 73 35-107 1-89 (390)
90 KOG2310 DNA repair exonuclease 96.6 0.071 1.5E-06 51.8 14.4 57 32-88 11-79 (646)
91 KOG1432 Predicted DNA repair e 96.6 0.2 4.3E-06 46.3 16.5 80 27-107 46-148 (379)
92 cd07410 MPP_CpdB_N Escherichia 96.4 0.0044 9.6E-08 55.9 5.0 65 36-105 2-94 (277)
93 KOG3325 Membrane coat complex 96.4 0.18 3.9E-06 41.1 13.3 116 37-235 3-124 (183)
94 PLN02533 probable purple acid 96.4 0.0043 9.3E-08 59.7 4.9 71 34-107 139-212 (427)
95 COG1768 Predicted phosphohydro 96.2 0.0097 2.1E-07 49.9 5.3 45 59-107 41-87 (230)
96 COG1407 Predicted ICC-like pho 96.2 0.015 3.2E-07 51.2 6.6 73 33-108 18-112 (235)
97 COG1311 HYS2 Archaeal DNA poly 96.1 0.32 7E-06 46.9 15.8 52 220-276 420-472 (481)
98 cd07408 MPP_SA0022_N Staphyloc 95.9 0.017 3.6E-07 51.7 5.7 65 36-105 2-81 (257)
99 cd08164 MPP_Ted1 Saccharomyces 95.8 0.022 4.8E-07 48.8 5.9 65 42-106 24-111 (193)
100 cd07378 MPP_ACP5 Homo sapiens 95.8 0.022 4.9E-07 51.1 6.3 69 36-106 2-83 (277)
101 cd07387 MPP_PolD2_C PolD2 (DNA 95.7 1 2.2E-05 40.4 16.2 50 220-274 205-257 (257)
102 cd07412 MPP_YhcR_N Bacillus su 95.4 0.026 5.7E-07 51.3 5.4 66 36-106 2-88 (288)
103 KOG2863 RNA lariat debranching 95.1 0.047 1E-06 50.5 5.9 76 35-110 1-92 (456)
104 cd07409 MPP_CD73_N CD73 ecto-5 94.8 0.071 1.5E-06 48.3 6.3 66 36-106 2-94 (281)
105 cd07411 MPP_SoxB_N Thermus the 94.7 0.057 1.2E-06 48.4 5.3 65 36-106 2-95 (264)
106 cd07406 MPP_CG11883_N Drosophi 94.1 0.11 2.4E-06 46.4 5.8 65 36-105 2-82 (257)
107 TIGR00282 metallophosphoestera 93.6 0.15 3.2E-06 46.0 5.6 67 35-106 1-71 (266)
108 PRK09419 bifunctional 2',3'-cy 93.6 0.099 2.2E-06 56.6 5.3 66 35-105 661-735 (1163)
109 cd07405 MPP_UshA_N Escherichia 92.6 0.16 3.4E-06 46.2 4.3 66 36-106 2-87 (285)
110 KOG1378 Purple acid phosphatas 92.2 1.2 2.6E-05 42.8 9.7 34 208-241 322-355 (452)
111 KOG3662 Cell division control 91.5 0.37 8.1E-06 45.8 5.5 74 33-106 47-144 (410)
112 cd07382 MPP_DR1281 Deinococcus 90.9 0.58 1.2E-05 41.9 5.9 66 36-106 1-70 (255)
113 cd08162 MPP_PhoA_N Synechococc 90.7 0.4 8.7E-06 44.2 4.9 65 36-105 2-90 (313)
114 COG0737 UshA 5'-nucleotidase/2 90.3 0.35 7.5E-06 47.7 4.4 69 33-106 25-115 (517)
115 PF04042 DNA_pol_E_B: DNA poly 90.3 0.43 9.4E-06 40.9 4.5 72 37-108 1-93 (209)
116 cd07407 MPP_YHR202W_N Saccharo 89.6 0.43 9.4E-06 43.3 4.1 67 35-106 6-97 (282)
117 PRK09420 cpdB bifunctional 2', 89.2 0.54 1.2E-05 47.8 4.8 69 32-105 23-121 (649)
118 TIGR01390 CycNucDiestase 2',3' 88.9 0.53 1.1E-05 47.7 4.5 66 35-105 3-98 (626)
119 KOG0376 Serine-threonine phosp 88.4 0.15 3.2E-06 49.0 0.2 107 14-122 20-132 (476)
120 PRK09419 bifunctional 2',3'-cy 87.9 0.72 1.6E-05 50.1 5.0 67 34-105 41-138 (1163)
121 KOG3339 Predicted glycosyltran 87.4 7 0.00015 33.2 9.5 85 63-153 40-140 (211)
122 PTZ00422 glideosome-associated 85.8 1.4 3E-05 41.9 5.1 77 29-105 21-108 (394)
123 PRK11907 bifunctional 2',3'-cy 85.0 1.3 2.9E-05 46.1 4.9 67 34-105 115-212 (814)
124 KOG2476 Uncharacterized conser 84.0 3.4 7.4E-05 39.8 6.7 70 33-103 4-75 (528)
125 TIGR01530 nadN NAD pyrophospha 83.6 2.4 5.3E-05 42.2 6.0 65 36-105 2-93 (550)
126 PRK09558 ushA bifunctional UDP 83.4 1.6 3.5E-05 43.4 4.7 69 33-106 33-121 (551)
127 KOG3947 Phosphoesterases [Gene 83.2 1.8 3.9E-05 39.0 4.3 67 34-107 61-127 (305)
128 PRK09418 bifunctional 2',3'-cy 78.9 2.8 6E-05 43.6 4.6 68 33-105 38-141 (780)
129 PTZ00235 DNA polymerase epsilo 78.7 5.7 0.00012 36.2 6.0 80 28-107 21-123 (291)
130 KOG2679 Purple (tartrate-resis 76.2 1.7 3.7E-05 39.1 1.9 69 34-106 43-126 (336)
131 COG4320 Uncharacterized protei 60.2 7.1 0.00015 36.0 2.5 54 29-90 51-108 (410)
132 PRK10773 murF UDP-N-acetylmura 59.0 39 0.00086 32.6 7.6 66 35-101 325-392 (453)
133 PF02875 Mur_ligase_C: Mur lig 54.8 33 0.00072 24.9 5.0 67 36-102 13-81 (91)
134 KOG0918 Selenium-binding prote 52.5 0.8 1.7E-05 43.2 -4.9 94 62-161 48-144 (476)
135 PF13258 DUF4049: Domain of un 50.8 38 0.00082 30.0 5.3 88 64-158 87-187 (318)
136 PF06874 FBPase_2: Firmicute f 44.3 32 0.00069 34.7 4.3 43 63-110 186-228 (640)
137 cd07381 MPP_CapA CapA and rela 41.5 54 0.0012 28.5 5.1 32 214-247 203-234 (239)
138 PF12641 Flavodoxin_3: Flavodo 40.5 1.3E+02 0.0029 24.7 6.9 53 38-90 2-67 (160)
139 PF02875 Mur_ligase_C: Mur lig 40.0 67 0.0015 23.2 4.7 64 8-78 21-87 (91)
140 PLN02965 Probable pheophorbida 38.1 1.1E+02 0.0024 26.4 6.6 21 208-228 59-81 (255)
141 TIGR01143 murF UDP-N-acetylmur 37.6 1.9E+02 0.0041 27.5 8.5 43 37-79 298-341 (417)
142 TIGR01143 murF UDP-N-acetylmur 37.5 1.5E+02 0.0032 28.2 7.8 52 9-71 307-365 (417)
143 cd07382 MPP_DR1281 Deinococcus 35.6 36 0.00078 30.5 3.0 40 64-106 1-40 (255)
144 PF10083 DUF2321: Uncharacteri 35.4 13 0.00027 30.7 0.0 47 205-257 22-77 (158)
145 PF06490 FleQ: Flagellar regul 35.0 84 0.0018 24.0 4.6 64 36-106 1-81 (109)
146 KOG2463 Predicted RNA-binding 34.8 1.3E+02 0.0028 28.1 6.3 72 202-274 208-286 (376)
147 KOG3425 Uncharacterized conser 33.8 1.4E+02 0.0031 23.6 5.6 60 47-106 12-79 (128)
148 PRK14093 UDP-N-acetylmuramoyla 33.1 2.7E+02 0.0059 27.1 8.9 66 35-101 337-408 (479)
149 TIGR01428 HAD_type_II 2-haloal 32.7 2.8E+02 0.006 22.9 8.0 68 34-104 108-175 (198)
150 PRK11929 putative bifunctional 32.7 1.7E+02 0.0038 31.2 8.0 71 35-105 834-906 (958)
151 TIGR00282 metallophosphoestera 31.4 52 0.0011 29.6 3.3 39 64-106 2-41 (266)
152 COG3855 Fbp Uncharacterized pr 30.7 24 0.00051 34.3 1.0 40 208-247 516-562 (648)
153 PF12982 DUF3866: Protein of u 28.2 2E+02 0.0044 26.6 6.5 56 32-91 86-141 (320)
154 COG1692 Calcineurin-like phosp 28.0 80 0.0017 28.2 3.8 66 35-105 1-70 (266)
155 PF09587 PGA_cap: Bacterial ca 27.6 99 0.0021 27.2 4.4 32 214-247 212-243 (250)
156 smart00854 PGA_cap Bacterial c 27.4 86 0.0019 27.3 4.0 30 216-247 203-232 (239)
157 TIGR01449 PGP_bact 2-phosphogl 26.0 3.8E+02 0.0082 22.2 8.0 67 34-104 101-168 (213)
158 COG1692 Calcineurin-like phosp 25.8 1.8E+02 0.004 26.0 5.6 38 64-102 2-39 (266)
159 KOG3770 Acid sphingomyelinase 25.7 1.4E+02 0.0031 29.9 5.4 63 48-110 195-267 (577)
160 TIGR03767 P_acnes_RR metalloph 25.6 2.3E+02 0.0051 27.9 6.8 58 206-265 367-431 (496)
161 PF04723 GRDA: Glycine reducta 25.6 2.5E+02 0.0054 22.8 5.8 70 33-106 4-79 (150)
162 PF09949 DUF2183: Uncharacteri 25.5 2.3E+02 0.0049 21.4 5.4 37 57-99 59-95 (100)
163 PRK14988 GMP/IMP nucleotidase; 24.7 3.6E+02 0.0077 23.1 7.4 64 34-99 109-172 (224)
164 cd07378 MPP_ACP5 Homo sapiens 24.1 1.3E+02 0.0029 26.5 4.7 25 207-231 190-214 (277)
165 PF04263 TPK_catalytic: Thiami 22.7 76 0.0016 25.0 2.4 55 35-89 36-112 (123)
166 PF09892 DUF2119: Uncharacteri 22.5 3.1E+02 0.0067 23.4 6.1 51 38-89 10-76 (193)
167 COG2897 SseA Rhodanese-related 22.5 2.5E+02 0.0054 25.6 6.1 57 47-108 75-131 (285)
168 TIGR02253 CTE7 HAD superfamily 21.8 4.7E+02 0.01 21.8 7.5 64 34-99 110-173 (221)
169 PF04056 Ssl1: Ssl1-like; Int 21.5 3.4E+02 0.0074 23.2 6.3 48 10-57 21-71 (193)
170 cd01445 TST_Repeats Thiosulfat 21.3 2.9E+02 0.0063 21.8 5.7 54 48-104 81-134 (138)
171 PLN02533 probable purple acid 20.3 96 0.0021 29.9 3.1 25 207-231 311-335 (427)
172 PLN02575 haloacid dehalogenase 20.3 6.4E+02 0.014 24.0 8.6 67 33-102 231-297 (381)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-73 Score=486.15 Aligned_cols=264 Identities=66% Similarity=1.248 Sum_probs=256.6
Q ss_pred CCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHh
Q 022620 31 QPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 110 (294)
Q Consensus 31 ~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~ 110 (294)
+.++.|+.|+|||||++.+|..+++..|..++..++|||||||||.+|+|++.+|..||.+||+++.+||||||...+..
T Consensus 39 ~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitq 118 (303)
T KOG0372|consen 39 QRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQ 118 (303)
T ss_pred eecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCC
Q 022620 111 VYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 190 (294)
Q Consensus 111 ~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~ 190 (294)
.|||++||.++||...+|+...+.|..||+++++++++||||||++|.+.+++||+.+.|.+++|.++.++|+|||||.+
T Consensus 119 vYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee 198 (303)
T KOG0372|consen 119 VYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEE 198 (303)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCceE
Q 022620 191 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHT 270 (294)
Q Consensus 191 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~ 270 (294)
..+|..++||.||.||++++++|++.||+.+|+|+||.+.+||++.++++++|||||||||++|+|.||+|+||++....
T Consensus 199 ~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~ 278 (303)
T KOG0372|consen 199 GPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKD 278 (303)
T ss_pred CCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCCCCC-CCCCC
Q 022620 271 FIQFEPAPRRGEPDVTRRT-PDYFL 294 (294)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (294)
|..|++++..++..-.+++ .+||+
T Consensus 279 F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 279 FRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred eEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999887666666 49985
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-67 Score=441.26 Aligned_cols=283 Identities=59% Similarity=1.119 Sum_probs=269.1
Q ss_pred hcHHHHHHHHhccCcCCCC-------------------CCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCee
Q 022620 12 TDLDEQISQLMQCKPLSEP-------------------QPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV 72 (294)
Q Consensus 12 ~~~~~~i~~~~~~~~~~~~-------------------~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~v 72 (294)
-++++.|+..++++-+.|. +|.+.|+.|+|||||++.+|.++++..|.-|+..++|+||+|
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 3567777777777766555 688999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEec
Q 022620 73 DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLH 152 (294)
Q Consensus 73 DrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vH 152 (294)
|||..|+|++.+++.||.+||.++.+||||||.+.+...|||++||..+||....|+...+.|..|+++++|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecc
Q 022620 153 GGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDG 232 (294)
Q Consensus 153 gGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G 232 (294)
||++|++.+++||+.+.|.+++|.++.++|++||||++.+.|.-++||.|+.||.+++.+|+..|++++|.|+||.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCe-EEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCCCC
Q 022620 233 FNWAHEQK-VVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 294 (294)
Q Consensus 233 ~~~~~~~~-~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (294)
|+.-++.| ++|+|||||||++|||.|++|.++++++++++.|.+.|..++..-.++...||+
T Consensus 244 ~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 99988777 999999999999999999999999999999999999998877777777778885
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=3.6e-64 Score=456.35 Aligned_cols=278 Identities=54% Similarity=1.048 Sum_probs=253.0
Q ss_pred HHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCC
Q 022620 14 LDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP 93 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p 93 (294)
++++.+.|+++..+ ++.+.+++|+|||||++.+|.++++..+..+.++++|||||||||++++|++.+++++|..+|
T Consensus 25 ~~~~~~il~~e~~~---~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p 101 (303)
T PTZ00239 25 CERAKEIFLEESNV---QPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSVETMEYLLCLKVKYP 101 (303)
T ss_pred HHHHHHHHHhCCCe---EecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHHHHHHHHHHhhhcCC
Confidence 44555555555555 345688999999999999999999999988889999999999999999999999999999999
Q ss_pred CcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhccccccc
Q 022620 94 QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQE 173 (294)
Q Consensus 94 ~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~ 173 (294)
.+++++|||||.+.++..++|..|+..+|+...+|..+.++|+.||++++++++++|||||++|...++++++.+.|+.+
T Consensus 102 ~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~~~~l~~i~~i~r~~~ 181 (303)
T PTZ00239 102 GNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHGGLSPDMRTIDQIRTIDRKIE 181 (303)
T ss_pred CcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcCccCcccccHhhhccccCCCC
Confidence 99999999999999999999999999999877889999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecC-CeEEEEEcCCCCCC
Q 022620 174 VPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHE-QKVVTIFSAPNYCY 252 (294)
Q Consensus 174 ~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~-~~~iti~Sa~~y~~ 252 (294)
.|.++.+.|++||||....+|.+++||.|+.||++++++||+++++++||||||++++||+..++ ++|+||||||+||+
T Consensus 182 ~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~ 261 (303)
T PTZ00239 182 IPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCY 261 (303)
T ss_pred CCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccC
Confidence 99999999999999998889999999999999999999999999999999999999999998765 45999999999999
Q ss_pred CCCCcEEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCCCC
Q 022620 253 RCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 294 (294)
Q Consensus 253 ~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (294)
..+|.||+|.++++..++|++|+|.+...+...++.++.||.
T Consensus 262 ~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 262 RCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred CCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 999999999999999999999999987644434445557873
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.6e-63 Score=449.63 Aligned_cols=262 Identities=71% Similarity=1.292 Sum_probs=245.8
Q ss_pred HHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCC
Q 022620 14 LDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP 93 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p 93 (294)
++++.+.++++..+ ++.+.+++|||||||++.+|.++|+..+.++.+++||||||||||++|+|++.++++++..+|
T Consensus 24 ~~~~~~il~~e~~~---~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p 100 (285)
T cd07415 24 CEKAKEILVKESNV---QRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSVETFLLLLALKVRYP 100 (285)
T ss_pred HHHHHHHHHhCCCE---EecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHHHHHHHHHHHhhcCC
Confidence 44555555555555 345689999999999999999999999998899999999999999999999999999999999
Q ss_pred CcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhccccccc
Q 022620 94 QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQE 173 (294)
Q Consensus 94 ~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~ 173 (294)
.+++++|||||.+.++..++|..|+..+|+...+|..+.++|+.||++++++++++|||||++|...++++++.++|+.+
T Consensus 101 ~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~~~~~~~i~~i~r~~~ 180 (285)
T cd07415 101 DRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPSIDTLDQIRAIDRFQE 180 (285)
T ss_pred CcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCCcccHHHhhcccCCCC
Confidence 99999999999999999999999999999877899999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCC
Q 022620 174 VPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYR 253 (294)
Q Consensus 174 ~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~ 253 (294)
.+.++.+.|++||||....+|.+++||.|+.||++++++||+++++++||||||++++||++.++++++||||||+||+.
T Consensus 181 ~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~y~~~ 260 (285)
T cd07415 181 VPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMFDDKLVTVWSAPNYCYR 260 (285)
T ss_pred CCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEEEecCCcEEEEecCCcccCC
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEeCCCceEEEEEecCC
Q 022620 254 CGNMASILEVDDCRSHTFIQFEPAP 278 (294)
Q Consensus 254 ~~n~~a~l~i~~~~~~~~~~~~~~~ 278 (294)
.+|.||+|.|+++..++|++|+|++
T Consensus 261 ~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 261 CGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred CCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999875
No 5
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.7e-63 Score=451.99 Aligned_cols=273 Identities=44% Similarity=0.890 Sum_probs=249.8
Q ss_pred HHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcE
Q 022620 17 QISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRI 96 (294)
Q Consensus 17 ~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v 96 (294)
+.+.|+++..+ ++.+.+++|||||||++.+|.++++..++++.+++||||||||||++++|++.+++.+|..+|.++
T Consensus 44 ~~~il~~ep~l---l~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v 120 (320)
T PTZ00480 44 ARDIFISQPIL---LELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENF 120 (320)
T ss_pred HHHHHHhCCce---EecCCCeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCce
Confidence 33334444443 345789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCC
Q 022620 97 TILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPH 176 (294)
Q Consensus 97 ~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~ 176 (294)
++||||||.+.++..++|..|+..+|+ ..+|..+.++|+.||++++++++++|||||++|...++++++.++|+.+.+.
T Consensus 121 ~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~ 199 (320)
T PTZ00480 121 FLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPD 199 (320)
T ss_pred EEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCc
Confidence 999999999999999999999999995 6799999999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCC
Q 022620 177 EGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCG 255 (294)
Q Consensus 177 ~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~ 255 (294)
++.+.|+|||||.. ..+|.+++||.|+.||++++++||+++++++||||||++++||++.++++|+||||||+||+..+
T Consensus 200 ~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~ 279 (320)
T PTZ00480 200 TGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFD 279 (320)
T ss_pred cchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCC
Confidence 99999999999986 67899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeCCCceEEEEEecCCCCCCCCCCCCCC-CCC
Q 022620 256 NMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTP-DYF 293 (294)
Q Consensus 256 n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (294)
|.||+|.|+++..++|++|+|.+....++.+-++. -.|
T Consensus 280 N~ga~l~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 318 (320)
T PTZ00480 280 NAGSMMTIDESLMCSFQILKPAEQGQGASQQNKPGSAKF 318 (320)
T ss_pred ccEEEEEECCCCcEeEEEecCCcccccccccccCCCCCC
Confidence 99999999999999999999988766555555553 444
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.3e-62 Score=448.15 Aligned_cols=261 Identities=34% Similarity=0.634 Sum_probs=226.8
Q ss_pred HHHHHHHHhccCcCCCC-CCCCCCEEEEccCCCCHHHHHHHHHhcCCCC-CCeEEEecCeecCCCCcHHHHHHHHHchhh
Q 022620 14 LDEQISQLMQCKPLSEP-QPVKSPVTICGDIHGQFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVR 91 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~-~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~l~~~ 91 (294)
+.++.+.|+++..+.+. .+..+|++|||||||++.+|.++|+..+.++ .++++|||||||||++|+||+.+|++||..
T Consensus 29 ~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~ 108 (321)
T cd07420 29 LREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLV 108 (321)
T ss_pred HHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhc
Confidence 33344444444443332 2345699999999999999999999999875 468999999999999999999999999999
Q ss_pred CCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--hhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhccc
Q 022620 92 YPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFD 169 (294)
Q Consensus 92 ~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~ 169 (294)
+|+++++||||||.+.++..+||..|+..+|+. ..+|..+.++|+.||++++++++++||||||++ ..++++++.++
T Consensus 109 ~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~ 187 (321)
T cd07420 109 YPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDNKILVVHGGISD-STDLDLLDKID 187 (321)
T ss_pred CCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhh
Confidence 999999999999999999999999999999974 679999999999999999999999999999986 45788888887
Q ss_pred cccc-----CCC----------------------CCccccccccCCCCCCC-CCcCCCCCccccCHHHHHHHHHhCCCeE
Q 022620 170 RVQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDISEQFNHTNNLKL 221 (294)
Q Consensus 170 r~~~-----~~~----------------------~~~~~~llW~dp~~~~~-~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 221 (294)
|... .|. ...+.|+|||||....+ |.+++||.|+.||++++++||+++++++
T Consensus 188 r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~ 267 (321)
T cd07420 188 RHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSL 267 (321)
T ss_pred ccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcE
Confidence 7421 111 03567999999987544 7777899999999999999999999999
Q ss_pred EEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEe
Q 022620 222 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 275 (294)
Q Consensus 222 iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 275 (294)
||||||++++||++.++++|+||||||+||+.++|.||+|.|+++..++|.+|.
T Consensus 268 IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 268 LIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred EEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 999999999999999999999999999999999999999999999999998874
No 7
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.3e-61 Score=442.44 Aligned_cols=247 Identities=40% Similarity=0.821 Sum_probs=231.4
Q ss_pred CCCCEEEEccCCCCHHHHHHHHHhcCCCCC-CeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhh
Q 022620 33 VKSPVTICGDIHGQFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 111 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~ 111 (294)
..++++||||||||+.+|.++|+..++++. ++++|||||||||++|+||+.+++++|..+|.++++||||||.+.++..
T Consensus 58 ~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~ 137 (316)
T cd07417 58 EGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKM 137 (316)
T ss_pred CCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHH
Confidence 346799999999999999999999998654 5799999999999999999999999999999999999999999999999
Q ss_pred hCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCC-CCCccchhhhhcccccccCCCCCccccccccCCCC
Q 022620 112 YGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 190 (294)
Q Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi-~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~ 190 (294)
++|..++..+|+ ..++..+.++|+.||++++++++++|||||+ ++...++++++.++|+.+.+.++.+.|+|||||..
T Consensus 138 ~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~ 216 (316)
T cd07417 138 YGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQP 216 (316)
T ss_pred hhhcchhhhccc-HHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCC
Confidence 999989988885 5788999999999999999998999999999 45678899999999998888889999999999998
Q ss_pred CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeC-CCce
Q 022620 191 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDD-CRSH 269 (294)
Q Consensus 191 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~-~~~~ 269 (294)
..+|.+++||.|+.||.+++++||+++++++||||||++++||++.++++++||||||+||+..+|.||+|.|++ +..+
T Consensus 217 ~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~ 296 (316)
T cd07417 217 QPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKP 296 (316)
T ss_pred CCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCcee
Confidence 888999999999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred EEEEEecCCCC
Q 022620 270 TFIQFEPAPRR 280 (294)
Q Consensus 270 ~~~~~~~~~~~ 280 (294)
+|++|++.+.+
T Consensus 297 ~~~~~~~~~~~ 307 (316)
T cd07417 297 KFTQFEAVPHP 307 (316)
T ss_pred eeEeccCCCCC
Confidence 99999998765
No 8
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.4e-61 Score=438.05 Aligned_cols=259 Identities=42% Similarity=0.826 Sum_probs=239.5
Q ss_pred HHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCC
Q 022620 14 LDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP 93 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p 93 (294)
++++.+.++++..+ ++.+.+++|||||||++.+|.++|+..+.++.++++|||||||||++|+|++.++..+|..+|
T Consensus 34 ~~~~~~il~~e~~l---l~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~evl~ll~~lk~~~p 110 (294)
T PTZ00244 34 LTEVREIFMSQPML---LEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSVETITLQFCYKIVYP 110 (294)
T ss_pred HHHHHHHHHhCCCe---EeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHHHHHHHHHHHhhccC
Confidence 33444445555544 345678999999999999999999999998888999999999999999999999999999999
Q ss_pred CcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhccccccc
Q 022620 94 QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQE 173 (294)
Q Consensus 94 ~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~ 173 (294)
.+++++|||||.+.++..++|..++..+|+ ..+|..+.++|+.||++++++++++|||||++|.+.++++++.++|+.+
T Consensus 111 ~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~ 189 (294)
T PTZ00244 111 ENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCD 189 (294)
T ss_pred CeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccC
Confidence 999999999999999999999999999995 6789999999999999999999999999999999999999999999998
Q ss_pred CCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCC
Q 022620 174 VPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCY 252 (294)
Q Consensus 174 ~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~ 252 (294)
.+..+.+.|++||||.. ..+|.+++||.|+.||++++++||+++++++||||||++++||++.++++++||||||+||+
T Consensus 190 ~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~ 269 (294)
T PTZ00244 190 VPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFASRQLVTVFSAPNYCG 269 (294)
T ss_pred CCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcCCCeEEEEeCCccccC
Confidence 88889999999999986 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEeCCCceEEEEEec
Q 022620 253 RCGNMASILEVDDCRSHTFIQFEP 276 (294)
Q Consensus 253 ~~~n~~a~l~i~~~~~~~~~~~~~ 276 (294)
..+|.||+|.|+++..++|++|.+
T Consensus 270 ~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 270 EFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999998764
No 9
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.3e-61 Score=438.82 Aligned_cols=260 Identities=46% Similarity=0.951 Sum_probs=241.4
Q ss_pred HHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCC
Q 022620 14 LDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP 93 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p 93 (294)
++++.+.|+++..+ ++.+.+++||||||||+.+|.++|+..+.++.+++||||||||||++++|++.++.++|..+|
T Consensus 32 ~~~~~~il~~ep~~---l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~e~i~ll~~lk~~~p 108 (293)
T cd07414 32 CLKSREIFLSQPIL---LELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYP 108 (293)
T ss_pred HHHHHHHHHhCCCe---EecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcHHHHHHHHHhhhhCC
Confidence 44444445555554 345689999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhccccccc
Q 022620 94 QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQE 173 (294)
Q Consensus 94 ~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~ 173 (294)
.++++||||||.+.++..++|..++..+|+ ..+|..+.++|+.||++++++++++|||||++|...++++++.++|+.+
T Consensus 109 ~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p~~~~l~~i~~i~r~~~ 187 (293)
T cd07414 109 ENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSPDLQSMEQIRRIMRPTD 187 (293)
T ss_pred CcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCcccCcHHHHhcccCCCC
Confidence 999999999999999999999999998884 6789999999999999999999999999999999999999999999998
Q ss_pred CCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCC
Q 022620 174 VPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCY 252 (294)
Q Consensus 174 ~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~ 252 (294)
.+..+.+.+++||||.. ..+|.+++||.|+.||.+++++||+++++++||||||++++||++..+++|+||||||+||+
T Consensus 188 ~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~iTvfSa~~Y~~ 267 (293)
T cd07414 188 VPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCG 267 (293)
T ss_pred CCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeCCCcEEEEecCCcccC
Confidence 88889999999999986 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEeCCCceEEEEEecC
Q 022620 253 RCGNMASILEVDDCRSHTFIQFEPA 277 (294)
Q Consensus 253 ~~~n~~a~l~i~~~~~~~~~~~~~~ 277 (294)
.++|.||+|.|+++..++|++|+|.
T Consensus 268 ~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 268 EFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999865
No 10
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.2e-61 Score=433.90 Aligned_cols=263 Identities=54% Similarity=0.977 Sum_probs=245.3
Q ss_pred hhcHHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchh
Q 022620 11 TTDLDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV 90 (294)
Q Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~ 90 (294)
.+.++++.+.|+++..+. +.+++++|||||||++++|.++|+..+..+.+++||||||||||++|+|++.+++++|.
T Consensus 7 ~~l~~~~~~il~~e~~~~---~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~lk~ 83 (271)
T smart00156 7 LELLREVKEIFRQEPNLV---EVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFALKI 83 (271)
T ss_pred HHHHHHHHHHHHhCCCeE---EeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHHHHh
Confidence 344666677777776664 45689999999999999999999999998899999999999999999999999999999
Q ss_pred hCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccc
Q 022620 91 RYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDR 170 (294)
Q Consensus 91 ~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r 170 (294)
.+|.+++++|||||.+.++..++|..++..+|+ ..+|..+.++|+.||++++++++++|||||++|...++++++.++|
T Consensus 84 ~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i~r 162 (271)
T smart00156 84 LYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKLKR 162 (271)
T ss_pred cCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcccC
Confidence 999999999999999999999999999999985 6899999999999999999998999999999999999999999999
Q ss_pred cccCCCCCccccccccCCCC-CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCC
Q 022620 171 VQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPN 249 (294)
Q Consensus 171 ~~~~~~~~~~~~llW~dp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~ 249 (294)
+.+.+.+..+.|++||||.. ..+|.+++||.++.||++++++||+++++++||||||++++||+..++++++||||||+
T Consensus 163 ~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~ 242 (271)
T smart00156 163 PQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSAPN 242 (271)
T ss_pred CCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECCcc
Confidence 98888889999999999964 78899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcEEEEEEeCCCceEEEEEecC
Q 022620 250 YCYRCGNMASILEVDDCRSHTFIQFEPA 277 (294)
Q Consensus 250 y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 277 (294)
||+.++|.||++.|+++..++|.+|+|.
T Consensus 243 y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 243 YCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9998999999999999999999999864
No 11
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-63 Score=422.41 Aligned_cols=294 Identities=79% Similarity=1.379 Sum_probs=282.6
Q ss_pred CCCCCCCCcChhcHHHHHHHHhccCcCCCC-------------------CCCCCCEEEEccCCCCHHHHHHHHHhcCCCC
Q 022620 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEP-------------------QPVKSPVTICGDIHGQFHDLAELFQIGGKCP 61 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------------~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~ 61 (294)
|.+..++.+...+++..|+.|.+++.+++. .+...++.|+||+||++++|.++++..|..+
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~p 86 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAP 86 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCC
Confidence 456677888889999999999999988877 5678899999999999999999999999999
Q ss_pred CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcE
Q 022620 62 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 141 (294)
Q Consensus 62 ~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~ 141 (294)
+..++|+|||||||++|.|++.++.++|.+||++|.+||||||...+...++|++||+++||....|..+.+.|..+|+.
T Consensus 87 dtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~t 166 (319)
T KOG0371|consen 87 DTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 166 (319)
T ss_pred CcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeE
Q 022620 142 ALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL 221 (294)
Q Consensus 142 ~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ 221 (294)
+.++++++|.|||++|.+.+++.++.+.|.+++|.++.++|+||+||+++-+|..++||.++.||.+..++|..++|+++
T Consensus 167 ali~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lsl 246 (319)
T KOG0371|consen 167 ALIESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSL 246 (319)
T ss_pred hhhccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEecCCCCCCCCCCCCCCCCCC
Q 022620 222 IARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 294 (294)
Q Consensus 222 iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (294)
+-|.|+.+++||.+.....++||||||+||++++|.+|++.+|+.....|.||+|+|++-...++++.||||+
T Consensus 247 isRahqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 247 ISRAHQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred hHHHHHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999998888888899999996
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=4.2e-61 Score=438.00 Aligned_cols=263 Identities=43% Similarity=0.784 Sum_probs=240.3
Q ss_pred cHHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhC
Q 022620 13 DLDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY 92 (294)
Q Consensus 13 ~~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~ 92 (294)
.++++.+.|+++..+. .++.+++||||||||+.+|.++|+..+.++.++++|||||||||++|+|++.+++++|..+
T Consensus 24 l~~~~~~il~~e~~l~---~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~Evi~lL~~lki~~ 100 (305)
T cd07416 24 IITEGAEILRQEPNLL---RIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILY 100 (305)
T ss_pred HHHHHHHHHHhCCCeE---ccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChHHHHHHHHHHHhhc
Confidence 3556666666666653 4568999999999999999999999999889999999999999999999999999999999
Q ss_pred CCcEEEEcCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccc
Q 022620 93 PQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQ 172 (294)
Q Consensus 93 p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~ 172 (294)
|.++++||||||.+.++..++|..++..+| ...++..+.++|+.||++++++++++|||||++|.+.++++++.++|+.
T Consensus 101 p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~~~~l~~i~~i~r~~ 179 (305)
T cd07416 101 PKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPELKTLDDIRKLDRFR 179 (305)
T ss_pred CCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcccccHHHhcccCCCC
Confidence 999999999999999999999999998888 4678899999999999999999999999999999999999999999999
Q ss_pred cCCCCCccccccccCCCCCC-------CCCc-CCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCC-----
Q 022620 173 EVPHEGPMCDLLWSDPDDRC-------GWGI-SPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQ----- 239 (294)
Q Consensus 173 ~~~~~~~~~~llW~dp~~~~-------~~~~-~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~----- 239 (294)
+.+..+.+.|++||||.... .|.+ ++||.|+.||++++++||+++++++||||||++++||++.+++
T Consensus 180 ~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~~~ 259 (305)
T cd07416 180 EPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYRKSQTTGF 259 (305)
T ss_pred CCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEecCCCcCCC
Confidence 88888999999999997522 3654 4899999999999999999999999999999999999998776
Q ss_pred -eEEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEecCCCC
Q 022620 240 -KVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 280 (294)
Q Consensus 240 -~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~ 280 (294)
+|+||||||+||+.++|.||+|.|+++. +.|.+|.+.|++
T Consensus 260 ~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 260 PSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred CcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 8999999999999999999999999884 799999999976
No 13
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.9e-61 Score=439.19 Aligned_cols=247 Identities=50% Similarity=0.979 Sum_probs=239.3
Q ss_pred CCCCCCEEEEccCCCCHHHHHHHHHhcC-CCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhH
Q 022620 31 QPVKSPVTICGDIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 109 (294)
Q Consensus 31 ~~~~~~i~viGDiHG~~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~ 109 (294)
+..+.||.|+|||||++.+|.+++...+ ++++.++||||||||||++|+|++.++.++|++||++++++|||||.+.++
T Consensus 55 ~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in 134 (331)
T KOG0374|consen 55 LELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASIN 134 (331)
T ss_pred eecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEecccccccccc
Confidence 3456699999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred hhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCC
Q 022620 110 QVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPD 189 (294)
Q Consensus 110 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~ 189 (294)
..|||++|+.++|+...+|..+.+.|+.||++++++++++|+|||++|.+.++++++.+.|+.+.+..+.++|++|+||.
T Consensus 135 ~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~ 214 (331)
T KOG0374|consen 135 RIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPD 214 (331)
T ss_pred ceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCC
Confidence 99999999999997778999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCc
Q 022620 190 D-RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRS 268 (294)
Q Consensus 190 ~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~ 268 (294)
. ..+|..+.||.++.||++++++||+++++++||||||++++||+++.+.+++||||||+||+.+.|.||+|.||+++.
T Consensus 215 ~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~ 294 (331)
T KOG0374|consen 215 DDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLK 294 (331)
T ss_pred CCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCe
Confidence 7 689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecC
Q 022620 269 HTFIQFEPA 277 (294)
Q Consensus 269 ~~~~~~~~~ 277 (294)
++|..++|.
T Consensus 295 ~sf~~l~p~ 303 (331)
T KOG0374|consen 295 CSFVILRPE 303 (331)
T ss_pred EEEEEeccc
Confidence 999999995
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.7e-59 Score=424.78 Aligned_cols=260 Identities=41% Similarity=0.751 Sum_probs=233.2
Q ss_pred HHHHHHHHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCC--------CeEEEecCeecCCCCcHHHHHHH
Q 022620 14 LDEQISQLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD--------TNYLFMGDYVDRGYYSVETVTLL 85 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~--------~~~vflGD~vDrG~~s~evl~~l 85 (294)
++++.+.|+++..+. +.+.+++||||||||+++|.++|+..+.++. .++||||||||||++|+||+.++
T Consensus 30 ~~~~~~il~~e~~~~---~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~evl~ll 106 (311)
T cd07419 30 CDAAEDIFKQEPMVL---RLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSLETICLL 106 (311)
T ss_pred HHHHHHHHHhCCCeE---eeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChHHHHHHH
Confidence 455555566666553 4567999999999999999999999887643 57999999999999999999999
Q ss_pred HHchhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC-----hhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCcc
Q 022620 86 VALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIE 160 (294)
Q Consensus 86 ~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~-----~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~ 160 (294)
++++..+|.++++||||||.+.++..++|..++..+++. ..++..+.++|+.||++++++++++|||||++|...
T Consensus 107 ~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHgGi~p~~~ 186 (311)
T cd07419 107 LALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHGGIGRSIN 186 (311)
T ss_pred HHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEccCCCCCCC
Confidence 999999999999999999999999999999998888865 368899999999999999888899999999999999
Q ss_pred chhhhhcccccc-cCCCCCccccccccCCCCC---CCCCcCC---CCCc--cccCHHHHHHHHHhCCCeEEEeeceeeec
Q 022620 161 TLDNIRNFDRVQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDISEQFNHTNNLKLIARAHQLVMD 231 (294)
Q Consensus 161 ~~~~i~~~~r~~-~~~~~~~~~~llW~dp~~~---~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~iIrGH~~~~~ 231 (294)
++++++.+.|+. ..+....+.|++||||... .+|.+++ ||.| +.||++++++||+++|+++||||||++++
T Consensus 187 ~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~ 266 (311)
T cd07419 187 HVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMD 266 (311)
T ss_pred cHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhC
Confidence 999999999986 4455678899999999863 4566655 8888 79999999999999999999999999999
Q ss_pred ceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEec
Q 022620 232 GFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEP 276 (294)
Q Consensus 232 G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~ 276 (294)
||...++++|+||||||+||+.++|.||++.|+++..+++++++|
T Consensus 267 G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 267 GFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999999999999999999999999999999999987
No 15
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=6.3e-58 Score=423.23 Aligned_cols=266 Identities=36% Similarity=0.606 Sum_probs=229.1
Q ss_pred HHHHHHHhccCcCCCC-CCCCCCEEEEccCCCCHHHHHHHHHhcCCCCC-CeEEEecCeecCCCCcHHHHHHHHHchhhC
Q 022620 15 DEQISQLMQCKPLSEP-QPVKSPVTICGDIHGQFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRY 92 (294)
Q Consensus 15 ~~~i~~~~~~~~~~~~-~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~ 92 (294)
.++.+.|+++..+.+. .+...+++|||||||++.+|.++|+..+.++. +.+||||||||||++|+||+.+++.++..+
T Consensus 45 ~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~ 124 (377)
T cd07418 45 LTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLL 124 (377)
T ss_pred HHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhcc
Confidence 4444555555555433 22337999999999999999999999998765 469999999999999999999999999999
Q ss_pred CCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--hhHHHHHHHHhhhCCcEEEEeceEEEecCCCCC-------------
Q 022620 93 PQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTALVESEIFCLHGGLSP------------- 157 (294)
Q Consensus 93 p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~------------- 157 (294)
|.++++||||||.+.++..++|..++..+|+. ..+++.+.+||++||++++++++++||||||++
T Consensus 125 p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~ 204 (377)
T cd07418 125 PDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGK 204 (377)
T ss_pred CCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHhCCcEEEECCCEEEECCCcCCccccccccccccc
Confidence 99999999999999999999999999999975 479999999999999999999899999999943
Q ss_pred --------------Cccchhhhhcccccc-cCCCCC---ccccccccCCCCCCCCCcC-CCCCccccCHHHHHHHHHhCC
Q 022620 158 --------------SIETLDNIRNFDRVQ-EVPHEG---PMCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHTNN 218 (294)
Q Consensus 158 --------------~~~~~~~i~~~~r~~-~~~~~~---~~~~llW~dp~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~ 218 (294)
.+.++++++.++|+. +.+..+ .+.|+|||||....+|.++ .||.|+.||++++++||++++
T Consensus 205 ~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~ 284 (377)
T cd07418 205 NRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNN 284 (377)
T ss_pred ccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcC
Confidence 456788888888863 444444 3689999999987777665 799999999999999999999
Q ss_pred CeEEEeecee------------eecceEEecC---CeEEEEEcCCCCC------CCCCCcEEEEEEeCC--CceEEEEEe
Q 022620 219 LKLIARAHQL------------VMDGFNWAHE---QKVVTIFSAPNYC------YRCGNMASILEVDDC--RSHTFIQFE 275 (294)
Q Consensus 219 ~~~iIrGH~~------------~~~G~~~~~~---~~~iti~Sa~~y~------~~~~n~~a~l~i~~~--~~~~~~~~~ 275 (294)
+++||||||+ +.+||++.++ ++|+||||||+|| +.++|.||++.++.+ ...+|+||+
T Consensus 285 l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~ 364 (377)
T cd07418 285 LKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFE 364 (377)
T ss_pred CcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEee
Confidence 9999999996 6799999886 9999999999999 578999999999665 479999999
Q ss_pred cC-CCC
Q 022620 276 PA-PRR 280 (294)
Q Consensus 276 ~~-~~~ 280 (294)
++ |++
T Consensus 365 ~~~~~~ 370 (377)
T cd07418 365 AVKPRP 370 (377)
T ss_pred ccCCCC
Confidence 98 544
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=9.6e-55 Score=387.30 Aligned_cols=256 Identities=45% Similarity=0.813 Sum_probs=235.2
Q ss_pred HHhccCcCCCCCCCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEE
Q 022620 20 QLMQCKPLSEPQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 20 ~~~~~~~~~~~~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 99 (294)
.|++++.+ +..+.||.|+|||||++.+|.++++..|.+...+++|||||||||..|+||+.+|.+||+.+|+.+++|
T Consensus 76 llr~Eknm---i~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLKi~yp~tl~lL 152 (517)
T KOG0375|consen 76 LLRQEKNM---IEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLKINYPKTLFLL 152 (517)
T ss_pred HHhcCCce---EeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHhcCCCCeEEEe
Confidence 34444444 567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCc
Q 022620 100 RGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 179 (294)
Q Consensus 100 ~GNHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~ 179 (294)
|||||.+.+...+.|..||..+| ..++++...+.|..||+++..++.++|||||++|.+.++++|+.++|..+.|..+.
T Consensus 153 RGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~l~RF~EpPa~Gp 231 (517)
T KOG0375|consen 153 RGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRKLDRFKEPPAFGP 231 (517)
T ss_pred cCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHhhhhccCCCccCc
Confidence 99999999999999999999999 67899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC-------CCC-CcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecC------CeEEEEE
Q 022620 180 MCDLLWSDPDDR-------CGW-GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHE------QKVVTIF 245 (294)
Q Consensus 180 ~~~llW~dp~~~-------~~~-~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~------~~~iti~ 245 (294)
++|+||+||.+. +-| .++.||.+|.|...++++||+++|+--|||+|+.++.||+.... +.+||||
T Consensus 232 mCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrksqttGFPSLiTiF 311 (517)
T KOG0375|consen 232 MCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIF 311 (517)
T ss_pred chhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcccccCCchheeee
Confidence 999999999651 113 34679999999999999999999999999999999999987653 4689999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCceEEEEEecCCCC
Q 022620 246 SAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRR 280 (294)
Q Consensus 246 Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~~ 280 (294)
|||||.+.++|+||||.-..+ .+.++||.++|++
T Consensus 312 SAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHP 345 (517)
T KOG0375|consen 312 SAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHP 345 (517)
T ss_pred cCCchhhhhccHHHHhhhhcc-cceeeccCCCCCC
Confidence 999999999999999987755 7889999999986
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=356.06 Aligned_cols=272 Identities=31% Similarity=0.610 Sum_probs=235.9
Q ss_pred cChhcHHHHHHHHhccCcCCCC-----------------------CCCCCCEEEEccCCCCHHHHHHHHHhcCCCCC-Ce
Q 022620 9 DTTTDLDEQISQLMQCKPLSEP-----------------------QPVKSPVTICGDIHGQFHDLAELFQIGGKCPD-TN 64 (294)
Q Consensus 9 ~~~~~~~~~i~~~~~~~~~~~~-----------------------~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~ 64 (294)
-...+++.+||.++..+.++.. ...+..+.|+||+||.+++|.-+|-+.|++.. ..
T Consensus 116 l~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~np 195 (631)
T KOG0377|consen 116 LRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNP 195 (631)
T ss_pred cCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCC
Confidence 4567899999999988887665 34567899999999999999999999999875 45
Q ss_pred EEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCC--hhHHHHHHHHhhhCCcEE
Q 022620 65 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTA 142 (294)
Q Consensus 65 ~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~lP~~~ 142 (294)
|||-||+||||.+|+|||..|+++-..+|..+++-|||||..+++..|||.+|...+|.. .++...+.++++.||++.
T Consensus 196 YvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~t 275 (631)
T KOG0377|consen 196 YVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGT 275 (631)
T ss_pred eeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhh
Confidence 999999999999999999999999999999999999999999999999999999999964 578899999999999999
Q ss_pred EEeceEEEecCCCCCCccchhhhhcccccc-----cCCC-----------------CCccccccccCCCCCCCCCcC-CC
Q 022620 143 LVESEIFCLHGGLSPSIETLDNIRNFDRVQ-----EVPH-----------------EGPMCDLLWSDPDDRCGWGIS-PR 199 (294)
Q Consensus 143 ~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~-----~~~~-----------------~~~~~~llW~dp~~~~~~~~~-~r 199 (294)
+++.++++||||++.. ..++-+..++|.. ..|. ...+.|++||||....++.++ -|
T Consensus 276 iid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~R 354 (631)
T KOG0377|consen 276 IIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLR 354 (631)
T ss_pred hcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCccccc
Confidence 9999999999999754 2444444444321 1111 112568999999987775554 69
Q ss_pred CCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCCceEEEEEecCCC
Q 022620 200 GAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPR 279 (294)
Q Consensus 200 g~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~~ 279 (294)
|.|.+||++++++||++++++++||+|++.++||++.++++|+|||||+||...+.|+||++++......+|+||.++..
T Consensus 355 GgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~ 434 (631)
T KOG0377|consen 355 GGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQ 434 (631)
T ss_pred CCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999997765
Q ss_pred CC
Q 022620 280 RG 281 (294)
Q Consensus 280 ~~ 281 (294)
+.
T Consensus 435 t~ 436 (631)
T KOG0377|consen 435 TK 436 (631)
T ss_pred hh
Confidence 43
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.2e-41 Score=314.27 Aligned_cols=250 Identities=41% Similarity=0.831 Sum_probs=232.3
Q ss_pred CCCCCCEEEEccCCCCHHHHHHHHHhcCCCCC-CeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhH
Q 022620 31 QPVKSPVTICGDIHGQFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 109 (294)
Q Consensus 31 ~~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~ 109 (294)
++...++.++||+||++.++.+++...+.++. ..++|-||++|||..+.|+...+...+..+|+++|++|||||...++
T Consensus 210 ~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~ 289 (476)
T KOG0376|consen 210 VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMN 289 (476)
T ss_pred cCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHH
Confidence 56778999999999999999999999988764 67999999999999999999999999999999999999999999999
Q ss_pred hhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCC-CCccchhhhhcccccccCCCCCccccccccCC
Q 022620 110 QVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLS-PSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 188 (294)
Q Consensus 110 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~-~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp 188 (294)
..++|..++..+|+. +.+..+.+.|..||++..++++++.+|||+. ++-..+++++++.|....+.++.+++++|++|
T Consensus 290 ~iy~f~~e~~~kyte-~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~p 368 (476)
T KOG0376|consen 290 KIYGFEGEVKAKYTE-EMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDP 368 (476)
T ss_pred HHhCCCcchhhhhHH-HHHHhhhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCC
Confidence 999999999998854 4445555999999999999999999999985 45567999999999988899999999999999
Q ss_pred CCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEe-CCC
Q 022620 189 DDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVD-DCR 267 (294)
Q Consensus 189 ~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~-~~~ 267 (294)
....+..++.||.|..||.+++.+||+.++++.|||||+..+.||++.++|+|+|+||||+||...+|.||++.++ ++.
T Consensus 369 q~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~ 448 (476)
T KOG0376|consen 369 QPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDL 448 (476)
T ss_pred ccccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCC
Confidence 9888889999999999999999999999999999999999999999999999999999999999999999999998 678
Q ss_pred ceEEEEEecCCCCC
Q 022620 268 SHTFIQFEPAPRRG 281 (294)
Q Consensus 268 ~~~~~~~~~~~~~~ 281 (294)
...+++|+|.|++.
T Consensus 449 ~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 449 TPNFYTFEAVPHPD 462 (476)
T ss_pred ccceeecccCCCCC
Confidence 99999999999874
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3.7e-36 Score=263.45 Aligned_cols=214 Identities=44% Similarity=0.757 Sum_probs=173.1
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHH
Q 022620 38 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 117 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e 117 (294)
+|||||||++++|.++|+..+..+.+.+|||||++|||+++.+++.++..++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999999876 7789999999999998776554432
Q ss_pred H--------HHHhCChhHHHHHHHHhhhCCcEEEEec-eEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCC
Q 022620 118 C--------LRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDP 188 (294)
Q Consensus 118 ~--------~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp 188 (294)
. ...+.....+..+.+|++.||++..++. +++|||||++|......+.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 1 2333345677888899999999998876 99999999999876555443 2233445688999999
Q ss_pred CCCCCCC-cCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEE
Q 022620 189 DDRCGWG-ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 262 (294)
Q Consensus 189 ~~~~~~~-~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~ 262 (294)
.....+. .+.++. ++++...|++.++.++||+|||++..++.....+++++|||++.|+...+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 7533322 222222 899999999999999999999999998876678899999999999776677666653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.97 E-value=2.9e-29 Score=223.14 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=133.2
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC---------CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~---------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
++++||||||||++.|.++|+++++. ..+++|||||||||||+|.+||++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999998874 45789999999999999999999999885 33579999999999
Q ss_pred hhhHhhhC-------ChHHHHHHhCC------hhHHHHHHHHhhhCCcEEEEe-ceEEEecCCCCCCcc--chhhhhccc
Q 022620 106 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIE--TLDNIRNFD 169 (294)
Q Consensus 106 ~~~~~~~~-------~~~e~~~~~~~------~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~~~~~--~~~~i~~~~ 169 (294)
++++...+ ...++...|.. ..+.+.+.+|++++|++..++ ++++|||||++|... ...++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 98876432 12344445532 235677889999999987663 579999999987631 11111
Q ss_pred ccccCCCCCccccccccCCCC---------CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCe
Q 022620 170 RVQEVPHEGPMCDLLWSDPDD---------RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQK 240 (294)
Q Consensus 170 r~~~~~~~~~~~~llW~dp~~---------~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~ 240 (294)
...++|++-.. ...|.... .+.+.+|.||||+...... +.
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~~---~~ 203 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRFV---NH 203 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccceec---CC
Confidence 12344542111 11222111 1446799999999765433 45
Q ss_pred EEEEEcCCCCCCCCCCcEEEEEEeCCC
Q 022620 241 VVTIFSAPNYCYRCGNMASILEVDDCR 267 (294)
Q Consensus 241 ~iti~Sa~~y~~~~~n~~a~l~i~~~~ 267 (294)
.+.|+|+..| .+.. +++.+++..
T Consensus 204 ~i~IDtGa~~---gG~L-tal~l~~~~ 226 (245)
T PRK13625 204 TVNIDTGCVF---GGRL-TALRYPEME 226 (245)
T ss_pred eEEEECcCcc---CCEE-EEEECCCCc
Confidence 7899987533 2333 445566543
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=3.2e-29 Score=217.52 Aligned_cols=177 Identities=21% Similarity=0.311 Sum_probs=131.2
Q ss_pred EEEccCCCCHHHHHHHHHhcCC--------CCCCeEEEecCeecCCCCcHHHHHHHHHchhh---CCCcEEEEcCCchhh
Q 022620 38 TICGDIHGQFHDLAELFQIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 106 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~~~~~--------~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~---~p~~v~~l~GNHE~~ 106 (294)
+||||||||+++|.++|+.+++ .+.+.+|++||+||||+++.+|++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 35688999999999999999999999999754 456799999999999
Q ss_pred hhHhhhCChH-HHHHHhC-----Ch---hHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCC
Q 022620 107 QITQVYGFYD-ECLRKYG-----NA---NIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHE 177 (294)
Q Consensus 107 ~~~~~~~~~~-e~~~~~~-----~~---~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~ 177 (294)
.+...+.+.. ....... .. .....+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443221 1111110 01 11235689999999988865 79999999843
Q ss_pred CccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCC
Q 022620 178 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 248 (294)
Q Consensus 178 ~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~ 248 (294)
+|.+.-... .... .-+...+.++++.++.+++|+|||+++.+....+++++++|+++.
T Consensus 140 ------~w~r~y~~~----~~~~---~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKE----TSDK---ECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhh----hhhc---cchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 343220000 0000 001246778999999999999999999887678899999999864
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.96 E-value=2.8e-28 Score=219.27 Aligned_cols=220 Identities=19% Similarity=0.301 Sum_probs=146.5
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhC
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 113 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 113 (294)
|+++||||||||+++|.++|+++++. ..+.++||||+|||||+|.+|+++++++. .++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 46789999999999999999999999873 46999999999998876555
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhhCCcEEEE-eceEEEecCCCCCCccchhhhhcccccccCCCCC----cccccc
Q 022620 114 FY----DECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG----PMCDLL 184 (294)
Q Consensus 114 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~----~~~~ll 184 (294)
.. .....++........+.+|++++|+...+ ++++++||||++|.+...+......+.+...... .+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 12333333334456788999999998775 5589999999999885444333333322221111 123344
Q ss_pred ccCCCCCCCCCcCCCCCc-cccCHHHHH--HHHHhC-----------------------------CCeEEEeeceeeecc
Q 022620 185 WSDPDDRCGWGISPRGAG-YTFGQDISE--QFNHTN-----------------------------NLKLIARAHQLVMDG 232 (294)
Q Consensus 185 W~dp~~~~~~~~~~rg~~-~~fg~~~~~--~fl~~~-----------------------------~~~~iIrGH~~~~~G 232 (294)
|++|. .|.+...+.. ..+.-.++. +||... .-..||.||.+...|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 44442 3444333322 111111111 122211 234799999999778
Q ss_pred eEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCCC
Q 022620 233 FNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR 267 (294)
Q Consensus 233 ~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~~ 267 (294)
... .+.++.++|+ |.. ++.=+.+++++..
T Consensus 234 ~~~--~~~~~~LDtG---cvw-gg~Lta~~l~~~~ 262 (275)
T PRK00166 234 LTT--PPNIIALDTG---CVW-GGKLTALRLEDKQ 262 (275)
T ss_pred ccC--CCCeEEeecc---ccc-CCeEEEEEeCCCc
Confidence 765 5679999987 422 3444566777543
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.96 E-value=1.5e-27 Score=210.79 Aligned_cols=202 Identities=19% Similarity=0.338 Sum_probs=131.8
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCCC----------CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKCP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~~----------~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
+||.||||||||+++|+++|+.+++.+ .+++|||||+||||++|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997653 468999999999999999999999998654 46999999999
Q ss_pred hhhhHhhhCC-------hHHHHHHhC--ChhHHHHHHHHhhhCCcEEEEe-ceEEEecCCCCCCccchhhhhcccccccC
Q 022620 105 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRVQEV 174 (294)
Q Consensus 105 ~~~~~~~~~~-------~~e~~~~~~--~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~~~~~~~~~i~~~~r~~~~ 174 (294)
.++++...+. ..++...+. ...+.....+||+.||+...++ ++++|||||+++....... .
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~-~-------- 149 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS-K-------- 149 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc-h--------
Confidence 9988754321 122333332 2456678899999999987664 4799999998765321110 0
Q ss_pred CCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCC
Q 022620 175 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYR 253 (294)
Q Consensus 175 ~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl-~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~ 253 (294)
......+|.+..... ...+. ..-..|. ...+.+.+|.|||++...... +..+.|++++-|
T Consensus 150 ---~~~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~~~~~vv~GHt~~~~~~~~---~~~i~IDtGav~--- 210 (234)
T cd07423 150 ---RVRSFALYGDTTGET----DEFGL------PVRRDWAKEYRGDALVVYGHTPVPEPRWL---NNTINIDTGCVF--- 210 (234)
T ss_pred ---hheeeeecccccCCc----CCCCC------ccchhhHhhCCCCeEEEECCCCCccceEe---CCEEEEECCCCC---
Confidence 001122443321100 00000 0000111 123557899999998755432 347889988655
Q ss_pred CCCcEEEEEEeCCC
Q 022620 254 CGNMASILEVDDCR 267 (294)
Q Consensus 254 ~~n~~a~l~i~~~~ 267 (294)
.|..+| +.+++..
T Consensus 211 gG~Lt~-l~~~~~~ 223 (234)
T cd07423 211 GGKLTA-LRYPERE 223 (234)
T ss_pred CCcceE-EECCCCc
Confidence 234444 4555543
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.96 E-value=8.4e-28 Score=210.67 Aligned_cols=116 Identities=23% Similarity=0.345 Sum_probs=93.0
Q ss_pred EEEccCCCCHHHHHHHHHhcCCC--------CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhH
Q 022620 38 TICGDIHGQFHDLAELFQIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 109 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~~~~~~--------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~ 109 (294)
+||||||||+++|.++|+++++. +.+++|||||||||||+|.+|+++++++... .++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~~--~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVDA--GHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhcC--CCEEEEEccCcHHHHH
Confidence 69999999999999999998764 4678999999999999999999999998643 4799999999999886
Q ss_pred hhhCC------h-----------HHHHHHhC-ChhHHHHHHHHhhhCCcEEEEeceEEEecCCCC
Q 022620 110 QVYGF------Y-----------DECLRKYG-NANIWKIFTDLFDYFPLTALVESEIFCLHGGLS 156 (294)
Q Consensus 110 ~~~~~------~-----------~e~~~~~~-~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~ 156 (294)
...+. . .++...++ ..+......+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 43221 0 12333332 234567789999999998875 58999999985
No 25
>PHA02239 putative protein phosphatase
Probab=99.95 E-value=2.1e-27 Score=209.37 Aligned_cols=175 Identities=21% Similarity=0.286 Sum_probs=127.4
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC--CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 112 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~ 112 (294)
|++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57999999999999999999987543 468899999999999999999999998753 345799999999999876432
Q ss_pred C----------C----hHHHHHHhCCh------------------------------hHHHHHHHHhhhCCcEEEEeceE
Q 022620 113 G----------F----YDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALVESEI 148 (294)
Q Consensus 113 ~----------~----~~e~~~~~~~~------------------------------~~~~~~~~~~~~lP~~~~i~~~~ 148 (294)
. + ..+++..|+.. .....+.+|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 1 0 12445566421 0224556699999998875 489
Q ss_pred EEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeecee
Q 022620 149 FCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQL 228 (294)
Q Consensus 149 ~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~ 228 (294)
+|||||+.|..+..+|. ..+++|.+. . . ++. .-+.||.||||
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-f----~--~~~-----------------~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-F----Q--PRK-----------------DGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-c----C--CCC-----------------CCcEEEECCCC
Confidence 99999998875433332 268999965 2 1 111 12689999999
Q ss_pred eecceEEecCCeEEEEEcCCCC
Q 022620 229 VMDGFNWAHEQKVVTIFSAPNY 250 (294)
Q Consensus 229 ~~~G~~~~~~~~~iti~Sa~~y 250 (294)
+..+.... .++.|.|+++..|
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc-cCCEEEeecCccc
Confidence 97654333 3457899987544
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.95 E-value=8.9e-28 Score=214.37 Aligned_cols=133 Identities=20% Similarity=0.283 Sum_probs=106.2
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhC
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 113 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 113 (294)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|++++.++. .++++|+||||.+++....+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57999999999999999999999876 46889999999999999999999999885 35889999999999987666
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhhCCcEEEEe-ceEEEecCCCCCCccchhhhhccccc
Q 022620 114 FY----DECLRKYGNANIWKIFTDLFDYFPLTALVE-SEIFCLHGGLSPSIETLDNIRNFDRV 171 (294)
Q Consensus 114 ~~----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~~~vHgGi~~~~~~~~~i~~~~r~ 171 (294)
+. .+....+.......++.+|++++|+..... .++++||||++|.++..+......+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~ev 139 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDV 139 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHH
Confidence 42 223333334456678999999999987543 36999999999999644444433443
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.95 E-value=2e-27 Score=207.86 Aligned_cols=180 Identities=17% Similarity=0.151 Sum_probs=122.9
Q ss_pred CCCCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhh
Q 022620 33 VKSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 111 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~ 111 (294)
..+|++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+||+++++. ++++|+||||.++++..
T Consensus 15 ~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~ 88 (218)
T PRK11439 15 QWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDAL 88 (218)
T ss_pred CCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHH
Confidence 4469999999999999999999999876 5688999999999999999999999763 57899999999998764
Q ss_pred hCChHHHHHHhC--------C--hhHHHHHHHHhhhCCcEEEEe---ceEEEecCCCCCCccchhhhhcccccccCCCCC
Q 022620 112 YGFYDECLRKYG--------N--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 178 (294)
Q Consensus 112 ~~~~~e~~~~~~--------~--~~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~ 178 (294)
.+.....+...+ . .+....+.+|+++||+...+. +++++||||++... ...+. . .
T Consensus 89 ~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~~~~~-----~------~ 156 (218)
T PRK11439 89 ASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-YEWQK-----D------V 156 (218)
T ss_pred HCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-hhhhc-----c------C
Confidence 321111111111 1 123456678999999987653 46999999974321 11000 0 0
Q ss_pred ccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCC
Q 022620 179 PMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 250 (294)
Q Consensus 179 ~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y 250 (294)
...+++|+++...+.+. .+ ...+.+.+|.||||++.... .+..+.|++++.|
T Consensus 157 ~~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 157 DLHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred CccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 12457898553211110 00 11245689999999976543 2447899988654
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=6.6e-27 Score=209.06 Aligned_cols=200 Identities=17% Similarity=0.263 Sum_probs=138.6
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC------CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCC-cEEEEcCCchhhh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQ 107 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~l~GNHE~~~ 107 (294)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 47999999999999999999865422 2457999999999999999999999999888775 6899999999887
Q ss_pred hHhhhC-----------------------------------------C----------------------hHHHHHHhCC
Q 022620 108 ITQVYG-----------------------------------------F----------------------YDECLRKYGN 124 (294)
Q Consensus 108 ~~~~~~-----------------------------------------~----------------------~~e~~~~~~~ 124 (294)
+..... | ..++..+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 654321 0 0134555553
Q ss_pred h--------hHHHHHHHHhhhCCcEEEEeceE-------------EEecCCCCCCccchhhhhccc-ccccCCCCCcccc
Q 022620 125 A--------NIWKIFTDLFDYFPLTALVESEI-------------FCLHGGLSPSIETLDNIRNFD-RVQEVPHEGPMCD 182 (294)
Q Consensus 125 ~--------~~~~~~~~~~~~lP~~~~i~~~~-------------~~vHgGi~~~~~~~~~i~~~~-r~~~~~~~~~~~~ 182 (294)
. .+.....+|++.||.....+ ++ +|||||+.|..+..+|.+.+. +....| -.+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccc
Confidence 2 23456788999999987643 56 999999999988777766433 111222 248
Q ss_pred ccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEE
Q 022620 183 LLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 262 (294)
Q Consensus 183 llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~ 262 (294)
++|.+... ...++... ..-++||.||+. .....+.-|.|+++..|. +...|++.
T Consensus 237 ~l~~R~~f----~~~~~~~~--------------~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~---~~l~aa~v 290 (304)
T cd07421 237 PLSGRKNV----WNIPQELA--------------DKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFD---DRPIAAIV 290 (304)
T ss_pred ccccchhh----hcCccccc--------------CCCeEEEECCCC-----CceecCCEEEEECCCCcC---CceeEEEE
Confidence 89996633 11222110 011789999993 234456678899885553 34456665
Q ss_pred EeC
Q 022620 263 VDD 265 (294)
Q Consensus 263 i~~ 265 (294)
+-.
T Consensus 291 lp~ 293 (304)
T cd07421 291 LPS 293 (304)
T ss_pred ecc
Confidence 543
No 29
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.95 E-value=3.5e-27 Score=210.10 Aligned_cols=123 Identities=24% Similarity=0.327 Sum_probs=101.1
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCCh
Q 022620 37 VTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 115 (294)
Q Consensus 37 i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 115 (294)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|+||++++++++ .++++|+||||.+++...++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 57889999999999999999999999986 4699999999999887655532
Q ss_pred ----HHHHHHhCChhHHHHHHHHhhhCCcEEEEec-eEEEecCCCCCCccchh
Q 022620 116 ----DECLRKYGNANIWKIFTDLFDYFPLTALVES-EIFCLHGGLSPSIETLD 163 (294)
Q Consensus 116 ----~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~~~vHgGi~~~~~~~~ 163 (294)
.+...++.......++.+|++++|+...+++ ++++||||++|.|...+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHH
Confidence 1233333333445678999999999987654 79999999999985444
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.94 E-value=1.9e-25 Score=193.90 Aligned_cols=190 Identities=20% Similarity=0.283 Sum_probs=128.0
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhC
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 113 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 113 (294)
+|+++||||||++.+|+++++.++.. ..+.++++||++|||+++.++++++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 58999999999999999999998764 467899999999999999999999876 25899999999998876543
Q ss_pred --ChHHHHHHhCC--------hhHHHHHHHHhhhCCcEEEEe---ceEEEecCCCCCCccchhhhhcccccccCCCCCcc
Q 022620 114 --FYDECLRKYGN--------ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPM 180 (294)
Q Consensus 114 --~~~e~~~~~~~--------~~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~ 180 (294)
...+.+...+. ....+...+||++||+...++ .++++||||+++... ...... +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 12223333322 124556888999999988764 369999999865431 111000 11112234
Q ss_pred ccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEE
Q 022620 181 CDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASI 260 (294)
Q Consensus 181 ~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~ 260 (294)
.+++|+++........ ...+.++||.|||+++..... +..+-|++++-| .+..+|+
T Consensus 149 ~~~~w~~~~~~~~~~~------------------~~~~~~~iV~GHTh~~~~~~~---~~~i~ID~Gsv~---gg~Lt~~ 204 (207)
T cd07424 149 EELLWSRTRIQKAQTQ------------------PIKGVDAVVHGHTPVKRPLRL---GNVLYIDTGAVF---DGNLTLL 204 (207)
T ss_pred eeeeeccchhhhcCcc------------------ccCCCCEEEECCCCCCcceEE---CCEEEEECCCCC---CCeEEEE
Confidence 6688986632111000 011347899999998765443 336778977533 3444544
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.92 E-value=4.2e-24 Score=186.78 Aligned_cols=181 Identities=17% Similarity=0.167 Sum_probs=118.2
Q ss_pred CCCCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhh
Q 022620 33 VKSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 111 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~ 111 (294)
..+|++||||||||+++|+++|+.+.+. ..+.++||||+|||||+|.++++++.+ .++++|+||||.++++..
T Consensus 13 ~~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~ 86 (218)
T PRK09968 13 HYRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAF 86 (218)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHH
Confidence 4469999999999999999999998854 467899999999999999999999865 258899999999998754
Q ss_pred hCChHHHHHHhC--------C--hhHHHHHHHHhhhCCcEEEEe---ceEEEecCCCCCCccchhhhhcccccccCCCCC
Q 022620 112 YGFYDECLRKYG--------N--ANIWKIFTDLFDYFPLTALVE---SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 178 (294)
Q Consensus 112 ~~~~~e~~~~~~--------~--~~~~~~~~~~~~~lP~~~~i~---~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~ 178 (294)
..-....+...+ . ........+|+++||+...+. .++++||||++... ..... ..
T Consensus 87 ~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~~----------~~ 154 (218)
T PRK09968 87 ETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFGK----------EI 154 (218)
T ss_pred hcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhcc----------cc
Confidence 211111111111 1 112334566999999887653 36899999973221 11000 00
Q ss_pred ccccccccCCCCCCCCCcCCCCCccccCHHHHHHHH-HhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCC
Q 022620 179 PMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN-HTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNY 250 (294)
Q Consensus 179 ~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl-~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y 250 (294)
...+++|.++.....+. .+. ...+.+++|+|||+++.-.. .++ .+-|++++.|
T Consensus 155 ~~~~~~w~r~~~~~~~~----------------~~~~~~~~~~~vv~GHTh~~~~~~--~~~-~i~IDtGs~~ 208 (218)
T PRK09968 155 AESELLWPVDRVQKSLN----------------GELQQINGADYFIFGHMMFDNIQT--FAN-QIYIDTGSPK 208 (218)
T ss_pred chhhceeCcHHHhhCcc----------------ccccccCCCCEEEECCCCcCccee--ECC-EEEEECCCCC
Confidence 12456887442211110 011 12356899999999864332 233 6788988644
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.52 E-value=1.5e-13 Score=111.78 Aligned_cols=160 Identities=19% Similarity=0.198 Sum_probs=99.4
Q ss_pred CCEEEEccCCCCHHHH----HHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHH--HHchhhCCCcEEEEcCCchhhhh
Q 022620 35 SPVTICGDIHGQFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQI 108 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l----~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l--~~l~~~~p~~v~~l~GNHE~~~~ 108 (294)
+||++|||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444445566788999999999999877766544 33334444579999999999876
Q ss_pred HhhhCChHHHHH---------------------------------HhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCC
Q 022620 109 TQVYGFYDECLR---------------------------------KYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGL 155 (294)
Q Consensus 109 ~~~~~~~~e~~~---------------------------------~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi 155 (294)
............ .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 543221111100 00001111222223323333333355799999988
Q ss_pred CCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceee
Q 022620 156 SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 229 (294)
Q Consensus 156 ~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 229 (294)
.+........ .......+.+..++++.++++++.||++.
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6553211110 11234567888999999999999999985
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.52 E-value=6.8e-13 Score=109.47 Aligned_cols=59 Identities=20% Similarity=0.380 Sum_probs=48.7
Q ss_pred CEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 36 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 36 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
|+.++||+||+.+.+.++++.+.. .+.++++||++++++.+. +... ..+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~~--~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LELK--APVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhcC--CcEEEEeCCCCCc
Confidence 589999999999999999998754 678999999999998655 1112 3599999999975
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.51 E-value=6.3e-13 Score=112.96 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=57.0
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCC--------cHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~--------s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
||+.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 6899999999999999999988766677899999999999873 456777776543 3599999999975
Q ss_pred h
Q 022620 107 Q 107 (294)
Q Consensus 107 ~ 107 (294)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.47 E-value=1.1e-12 Score=108.82 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=50.6
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCC-CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
||+.++||+||+..+++.+++..... +.+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 58999999999998888777766655 678899999998 457777776653 2499999999973
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.42 E-value=3.7e-12 Score=104.50 Aligned_cols=136 Identities=20% Similarity=0.285 Sum_probs=85.5
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCC
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 114 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~ 114 (294)
|||+++||+|++.+++.++++.+ ...+.++++||++++ .++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999988 346788899999993 7777777665 49999999997653322110
Q ss_pred hHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCC
Q 022620 115 YDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGW 194 (294)
Q Consensus 115 ~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~ 194 (294)
.. +....... ....+++++|+.+...
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11111111 1145899999965321
Q ss_pred CcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEc
Q 022620 195 GISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFS 246 (294)
Q Consensus 195 ~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~S 246 (294)
..+.+.+.+.+...++++++.||++.+.-.. ..+..+++.-|
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs 136 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGS 136 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-G
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCc
Confidence 0223455567778899999999999855443 23334444444
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.35 E-value=5.7e-12 Score=101.78 Aligned_cols=118 Identities=19% Similarity=0.195 Sum_probs=79.2
Q ss_pred CEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcH--HHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhC
Q 022620 36 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESRQITQVYG 113 (294)
Q Consensus 36 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~--evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 113 (294)
++.++||+||++. .....+.+.++++||+++++..+. +.++++.+++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5899999999987 123345678889999999886432 3455555443 11 36789999996411
Q ss_pred ChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCC
Q 022620 114 FYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCG 193 (294)
Q Consensus 114 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~ 193 (294)
.-+.+++++|+.+.+... ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~----------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLD----------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCcc----------------------cccc-------
Confidence 114478999995422110 0000
Q ss_pred CCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceE
Q 022620 194 WGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 234 (294)
Q Consensus 194 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 234 (294)
....|...+.+++++.+.++++.||++.+.|+.
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 113556778888899999999999999987775
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.27 E-value=1.1e-10 Score=102.81 Aligned_cols=157 Identities=19% Similarity=0.242 Sum_probs=96.9
Q ss_pred CEEEEccCCCCHHHHH-HHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhh---
Q 022620 36 PVTICGDIHGQFHDLA-ELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV--- 111 (294)
Q Consensus 36 ~i~viGDiHG~~~~l~-~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~--- 111 (294)
||+++|||||++.... +.++. ...+.++++||+++ .+.+++..+.++. + .+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999988643 23333 34578999999976 3567777776653 2 48999999998653200
Q ss_pred ----------h-----------------------CC--------hH-HHHHHhCChhHHHHHHHHhhhCCcEEEEeceEE
Q 022620 112 ----------Y-----------------------GF--------YD-ECLRKYGNANIWKIFTDLFDYFPLTALVESEIF 149 (294)
Q Consensus 112 ----------~-----------------------~~--------~~-e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~ 149 (294)
. +| .+ ++...|+.....+.+...++.++.+.....+++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 00 01 344555555666677777777753333344899
Q ss_pred EecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCC----CeEEEee
Q 022620 150 CLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNN----LKLIARA 225 (294)
Q Consensus 150 ~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~iIrG 225 (294)
+.|+++.-.....+.+ + .+.|.+. +-.+|...+.+.+++.. .++++.|
T Consensus 152 iaH~~~~G~g~~~~~~---------------c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAEDP---------------C---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCcccccc---------------c---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 9999975332111100 1 1233321 22366666665555443 7999999
Q ss_pred ceeee
Q 022620 226 HQLVM 230 (294)
Q Consensus 226 H~~~~ 230 (294)
|.+..
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 99875
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.20 E-value=9.7e-10 Score=96.31 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
++|.++||+||++.+++++++.+.....+.+|++||++++|+..-++..++..+.... ..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l~-~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEAH-LPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcC-CceEEEcCCCChH
Confidence 6899999999999999999987765667889999999999976766766666664332 2499999999975
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.17 E-value=2.7e-10 Score=96.23 Aligned_cols=66 Identities=23% Similarity=0.328 Sum_probs=47.1
Q ss_pred EEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCC-cHHHHHHHHHchhhCCCcEEEEcCCchhhhh
Q 022620 37 VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHESRQI 108 (294)
Q Consensus 37 i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~ 108 (294)
|+++||+||++..+.+ ..+...+.+.+|++||++++|.. ..+.+..+.++ +..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999998877 33333456788999999999875 33333444333 2349999999997543
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.12 E-value=4e-09 Score=89.38 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=42.6
Q ss_pred CEEEEccCC-CCHH-----HHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 36 PVTICGDIH-GQFH-----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 36 ~i~viGDiH-G~~~-----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .++++++..+. ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 589999999 5533 24444433 45678999999987 67788776653 2489999999963
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.01 E-value=6.7e-09 Score=92.12 Aligned_cols=215 Identities=14% Similarity=0.111 Sum_probs=106.3
Q ss_pred CCEEEEccCCCCH------HHHHHHHHhcCCCCCCeEEEecCeecC--C-----CCcHHHHHHHHHchhhCCCcEEEEcC
Q 022620 35 SPVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYPQRITILRG 101 (294)
Q Consensus 35 ~~i~viGDiHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDr--G-----~~s~evl~~l~~l~~~~p~~v~~l~G 101 (294)
|++++|||+|... .++.+.|+... ...+.++++||++|. | +...+++.++.++... +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999542 24455554322 345788999999985 2 2245677777777643 235999999
Q ss_pred CchhhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEE-eceEEEecCCCCCCccc-hhhhhcccccc---cCCC
Q 022620 102 NHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV-ESEIFCLHGGLSPSIET-LDNIRNFDRVQ---EVPH 176 (294)
Q Consensus 102 NHE~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~~~vHgGi~~~~~~-~~~i~~~~r~~---~~~~ 176 (294)
|||..... ......+. ..+.. |....+ +.+++++||-..+.-.. ......+-|-. ....
T Consensus 79 NHD~~~~~-------~~~~~~g~--------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 142 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM--------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFL 142 (241)
T ss_pred CCchhhhH-------HHHHhCCC--------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHH
Confidence 99974321 11111110 11111 222222 34699999976532111 11111111100 0000
Q ss_pred CCccccccccCCCCCCC-CCcCCCCCcc--ccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCC---eEEEEEcCCCC
Q 022620 177 EGPMCDLLWSDPDDRCG-WGISPRGAGY--TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQ---KVVTIFSAPNY 250 (294)
Q Consensus 177 ~~~~~~llW~dp~~~~~-~~~~~rg~~~--~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~---~~iti~Sa~~y 250 (294)
.......+|--+.-... -..+.+...+ -...+.+.+.+++.+++++|.||++.+.-.....++ +.+.+-+.
T Consensus 143 ~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgdw--- 219 (241)
T PRK05340 143 ALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGDW--- 219 (241)
T ss_pred hCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCCC---
Confidence 00000000000000000 0000001111 234567788888999999999999986444332232 23333322
Q ss_pred CCCCCCcEEEEEEeCCCceEEEEEe
Q 022620 251 CYRCGNMASILEVDDCRSHTFIQFE 275 (294)
Q Consensus 251 ~~~~~n~~a~l~i~~~~~~~~~~~~ 275 (294)
...+.+++++++ ...+++|.
T Consensus 220 ----~~~~~~~~~~~~-~~~~~~~~ 239 (241)
T PRK05340 220 ----HEQGSVLKVDAD-GVELIPFP 239 (241)
T ss_pred ----CCCCeEEEEECC-ceEEEeCC
Confidence 123788888876 45665553
No 43
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.99 E-value=1.5e-08 Score=88.33 Aligned_cols=193 Identities=16% Similarity=0.123 Sum_probs=103.2
Q ss_pred CEEEEccCCC----CHHHHH----HHHHhcCCCCCCeEEEecCeecCCCCcH---HHHHHHHHchhhCCCcEEEEcCCch
Q 022620 36 PVTICGDIHG----QFHDLA----ELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 36 ~i~viGDiHG----~~~~l~----~~l~~~~~~~~~~~vflGD~vDrG~~s~---evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
+++++||+|- ..+.+. .+++.+.....+.++++||+++.+.... .....+..+.. .+--++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 6899999995 333333 3444443344577889999999988432 22333344431 1123889999999
Q ss_pred hhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCcccccc
Q 022620 105 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 184 (294)
Q Consensus 105 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~ll 184 (294)
.... ..+. ...+-...+.+.|+..|- ..-++++|--+.+...
T Consensus 81 ~~~~-ld~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------ 122 (214)
T cd07399 81 LVLA-LEFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------ 122 (214)
T ss_pred chhh-CCCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------
Confidence 4321 1111 012334445555554431 1247888875432210
Q ss_pred ccCCCCCCCCCcCCCCCccccCHHHHHHHHHhC-CCeEEEeeceeeecceEEe----c-CCeEEEEEcCCCCCCCCCCcE
Q 022620 185 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN-NLKLIARAHQLVMDGFNWA----H-EQKVVTIFSAPNYCYRCGNMA 258 (294)
Q Consensus 185 W~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~iIrGH~~~~~G~~~~----~-~~~~iti~Sa~~y~~~~~n~~ 258 (294)
|.+. ...| ....-+.+.+.+.++++ ++++++.||.+... .... . ++.+..+.+........+|..
T Consensus 123 ~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~-~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 123 RPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAG-RTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred cCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCCc-eEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 1000 0001 01123445677888887 79999999998642 2222 1 334444544321111223322
Q ss_pred -EEEEEeCC-CceEEEEEec
Q 022620 259 -SILEVDDC-RSHTFIQFEP 276 (294)
Q Consensus 259 -a~l~i~~~-~~~~~~~~~~ 276 (294)
.+++++++ ..+.+.+|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 67777776 5788888876
No 44
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.99 E-value=5.6e-09 Score=81.75 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=80.7
Q ss_pred EEEccCCCCHHHHHHHH--HhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCCh
Q 022620 38 TICGDIHGQFHDLAELF--QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 115 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l--~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 115 (294)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33444556788899999999887766544422222233346999999999
Q ss_pred HHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCC
Q 022620 116 DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 195 (294)
Q Consensus 116 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~ 195 (294)
++++|+.+.+...... +.
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~--------- 87 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PD--------- 87 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------cc---------
Confidence 8899997654421000 00
Q ss_pred cCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceE
Q 022620 196 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 234 (294)
Q Consensus 196 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 234 (294)
...........+.+.+.+++|.||++....+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00145667778888899999999999876554
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.92 E-value=1.4e-08 Score=81.50 Aligned_cols=107 Identities=18% Similarity=0.101 Sum_probs=73.8
Q ss_pred EEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHH
Q 022620 38 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 117 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e 117 (294)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 3899999998877776654 35568899999973 34556665542 123889999999
Q ss_pred HHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCCcC
Q 022620 118 CLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGIS 197 (294)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~ 197 (294)
-+++++|+-+.+.. +..
T Consensus 57 ----------------------------~~Ilv~H~pp~~~~-------------------------~~~---------- 73 (129)
T cd07403 57 ----------------------------VDILLTHAPPAGIG-------------------------DGE---------- 73 (129)
T ss_pred ----------------------------cCEEEECCCCCcCc-------------------------Ccc----------
Confidence 37899998432110 000
Q ss_pred CCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceE
Q 022620 198 PRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 234 (294)
Q Consensus 198 ~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 234 (294)
+ ....|.+.+.+++++.+.++++.||++.+..+.
T Consensus 74 -~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 011345677888888899999999999877655
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.92 E-value=2.9e-09 Score=88.79 Aligned_cols=67 Identities=22% Similarity=0.148 Sum_probs=46.7
Q ss_pred EEEEccCCCCHHHHHHHH-HhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 37 VTICGDIHGQFHDLAELF-QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 37 i~viGDiHG~~~~l~~~l-~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
+.++||+|++.......+ +.......+.++++||+++++....... ++...+ .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 468999999988776655 3333445677889999999887654443 222222 234599999999986
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.90 E-value=3.3e-08 Score=80.27 Aligned_cols=117 Identities=21% Similarity=0.201 Sum_probs=75.6
Q ss_pred EEEEccCCCCHH------H----HHHHHHhcCCCCCCeEEEecCeecCCCCc--HHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 37 VTICGDIHGQFH------D----LAELFQIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 37 i~viGDiHG~~~------~----l~~~l~~~~~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
|+.++|+|=... . |.++++.+.....+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467999993222 1 12344445445568899999999988642 23445555554322 25999999999
Q ss_pred hhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCcccccc
Q 022620 105 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL 184 (294)
Q Consensus 105 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~ll 184 (294)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 6 78899865332100
Q ss_pred ccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceE
Q 022620 185 WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFN 234 (294)
Q Consensus 185 W~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 234 (294)
|. .. . -+.+.+.+++++.+++++++||++....+.
T Consensus 95 ~~---------~~-----~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 GR---------ER-----L-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred cc---------cc-----C-CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00 00 0 156678888999999999999999865544
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.88 E-value=1e-07 Score=80.07 Aligned_cols=159 Identities=17% Similarity=0.135 Sum_probs=95.1
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCC
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 114 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~ 114 (294)
++|.|+||.|+...+..+.++.....+.+.+|.+||++..... ..+..- + ..+++.++||+|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~--~~l~~~--~----~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL--DALEGG--L----AAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch--HHhhcc--c----ccceEEEEccCCCcccc-----
Confidence 6899999999999766666666666677888999999876542 222211 1 24699999999964321
Q ss_pred hHHHHHHhCChhHHHHHHHHhhhCCcE--EEE-eceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCC
Q 022620 115 YDECLRKYGNANIWKIFTDLFDYFPLT--ALV-ESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDR 191 (294)
Q Consensus 115 ~~e~~~~~~~~~~~~~~~~~~~~lP~~--~~i-~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~ 191 (294)
..+|.. ..+ +-+++++||....--
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~-------------------------------- 95 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVK-------------------------------- 95 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccc--------------------------------
Confidence 122322 222 358999999542110
Q ss_pred CCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEE--cCCCCCCCCCCcEEEEEEeCC-Cc
Q 022620 192 CGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIF--SAPNYCYRCGNMASILEVDDC-RS 268 (294)
Q Consensus 192 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~--Sa~~y~~~~~n~~a~l~i~~~-~~ 268 (294)
.....++.+.+..+++.+|.|||+.+.=.+. ++ ++.|. |.+.+ ++++..+++.++.+ ..
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~--~~-i~~vNPGS~s~p--r~~~~~sy~il~~~~~~ 157 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAEKV--GG-ILLVNPGSVSGP--RGGNPASYAILDVDNLE 157 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEEEE--CC-EEEEcCCCcCCC--CCCCCcEEEEEEcCCCE
Confidence 1123455566677889999999998643322 22 33333 33222 33455455555443 45
Q ss_pred eEEEEEecC
Q 022620 269 HTFIQFEPA 277 (294)
Q Consensus 269 ~~~~~~~~~ 277 (294)
+....++..
T Consensus 158 ~~~~~~~~~ 166 (172)
T COG0622 158 VEVLFLERD 166 (172)
T ss_pred EEEEEeecc
Confidence 666555443
No 49
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.86 E-value=3e-07 Score=79.38 Aligned_cols=193 Identities=18% Similarity=0.226 Sum_probs=118.5
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCee--cCCCCcHHHHHH--HHHchhhCCCcEEEEcCCchhhhhH
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV--DRGYYSVETVTL--LVALKVRYPQRITILRGNHESRQIT 109 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~v--DrG~~s~evl~~--l~~l~~~~p~~v~~l~GNHE~~~~~ 109 (294)
.+++.+++|+||..+.+.+++..++....+.+++.||+. +.|+.- .+.+. +..++.. ...++.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-VAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-HHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 578999999999999999999998877788899999999 888742 22222 3333321 13599999999987654
Q ss_pred hhhC-----------------Ch---------HHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchh
Q 022620 110 QVYG-----------------FY---------DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLD 163 (294)
Q Consensus 110 ~~~~-----------------~~---------~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~ 163 (294)
.... |. -.+..++..+.++......+...-- ..+++..|+-+-... .
T Consensus 81 ~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~----~~~Il~~HaPP~gt~--~- 153 (226)
T COG2129 81 DVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN----PVNILLTHAPPYGTL--L- 153 (226)
T ss_pred HHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC----cceEEEecCCCCCcc--c-
Confidence 3110 00 0111222223334444444333210 012666776322111 0
Q ss_pred hhhcccccccCCCCCccccccccCCCCCCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEE
Q 022620 164 NIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVT 243 (294)
Q Consensus 164 ~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~it 243 (294)
| .+.| -..-|+++++++.+..+-.+.++||-+...|.... |.-+-
T Consensus 154 ------------------d--------------~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i--G~Tiv 198 (226)
T COG2129 154 ------------------D--------------TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI--GNTIV 198 (226)
T ss_pred ------------------c--------------CCCC-ccccchHHHHHHHHHhCCceEEEeeeccccccccc--CCeEE
Confidence 0 0011 02367899999999999999999999998887653 23333
Q ss_pred EEcCCCCCCCCCCcEEEEEEeCCCceEEEEEe
Q 022620 244 IFSAPNYCYRCGNMASILEVDDCRSHTFIQFE 275 (294)
Q Consensus 244 i~Sa~~y~~~~~n~~a~l~i~~~~~~~~~~~~ 275 (294)
|.=+| .+..+.|++++++. .+...+|.
T Consensus 199 VNPG~----~~~g~yA~i~l~~~-~Vk~~~~~ 225 (226)
T COG2129 199 VNPGP----LGEGRYALIELEKE-VVKLEQFS 225 (226)
T ss_pred ECCCC----ccCceEEEEEecCc-EEEEEEec
Confidence 44443 12345789998877 66666653
No 50
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.81 E-value=2.3e-08 Score=88.59 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=49.2
Q ss_pred CEEEEccCCCCH------HHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 36 PVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 36 ~i~viGDiHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
||.+++|+|.++ ..+.++++.+...+.+.+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 589999999763 23566777665555788999999999876566666555543 223499999999964
No 51
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.80 E-value=5.4e-08 Score=87.88 Aligned_cols=73 Identities=19% Similarity=0.169 Sum_probs=54.7
Q ss_pred CCCCCEEEEccCCCC----HHHHHHHHHhcCCCCCCeEEEecCeecCC-C-CcHHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 32 PVKSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRG-Y-YSVETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 32 ~~~~~i~viGDiHG~----~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~-~s~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
..+.||+++||+|.. ...+.++++.......+.++++||++|++ + ...++...+..++...| ++.+.||||.
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~ 124 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDR 124 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCc
Confidence 345899999999986 55677777776655667888999999954 2 23346667777765544 9999999996
Q ss_pred h
Q 022620 106 R 106 (294)
Q Consensus 106 ~ 106 (294)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 52
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.72 E-value=1.6e-06 Score=77.64 Aligned_cols=70 Identities=16% Similarity=0.026 Sum_probs=44.5
Q ss_pred CCEEEEccCCCCH----------------HHHHHHHHhcCCC--CCCeEEEecCeecCCCCcH-------HHHHHHHHch
Q 022620 35 SPVTICGDIHGQF----------------HDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV-------ETVTLLVALK 89 (294)
Q Consensus 35 ~~i~viGDiHG~~----------------~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~-------evl~~l~~l~ 89 (294)
-+++++||+|-.. ..++++++.+... ..+.++++||+++.|...- +....+..+.
T Consensus 5 ~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T cd07395 5 FYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLD 84 (262)
T ss_pred EEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhcc
Confidence 4688899999774 1345566655432 4567889999999886531 1222222221
Q ss_pred hhCCCcEEEEcCCchhh
Q 022620 90 VRYPQRITILRGNHESR 106 (294)
Q Consensus 90 ~~~p~~v~~l~GNHE~~ 106 (294)
.+-.++.++||||..
T Consensus 85 --~~vp~~~i~GNHD~~ 99 (262)
T cd07395 85 --PDIPLVCVCGNHDVG 99 (262)
T ss_pred --CCCcEEEeCCCCCCC
Confidence 123499999999974
No 53
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.69 E-value=4.3e-08 Score=86.47 Aligned_cols=68 Identities=9% Similarity=0.105 Sum_probs=43.5
Q ss_pred EEEEccCCCCH------HHHHHHHHhcCCCCCCeEEEecCeecCC-----CC--cHHHHHHHHHchhhCCCcEEEEcCCc
Q 022620 37 VTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYPQRITILRGNH 103 (294)
Q Consensus 37 i~viGDiHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDrG-----~~--s~evl~~l~~l~~~~p~~v~~l~GNH 103 (294)
+++|||+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..++.. +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 233444433222 467888999999952 11 13456666666543 34699999999
Q ss_pred hhh
Q 022620 104 ESR 106 (294)
Q Consensus 104 E~~ 106 (294)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 54
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.64 E-value=1.2e-07 Score=83.53 Aligned_cols=67 Identities=27% Similarity=0.334 Sum_probs=46.9
Q ss_pred CEEEEccCCCC------------HHHHHHHHHhcCCC--CCCeEEEecCeecCCCCc-H-HHHHHHHHchhhCCCcEEEE
Q 022620 36 PVTICGDIHGQ------------FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYS-V-ETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 36 ~i~viGDiHG~------------~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s-~-evl~~l~~l~~~~p~~v~~l 99 (294)
|++++||+|=. ...++++++.+... +.+.+|++||+++.|... . .++..+..+ +..++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 68999999944 34677777766543 567888999999987521 1 233444444 2348999
Q ss_pred cCCchhh
Q 022620 100 RGNHESR 106 (294)
Q Consensus 100 ~GNHE~~ 106 (294)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 55
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.62 E-value=1.1e-07 Score=76.39 Aligned_cols=141 Identities=46% Similarity=0.778 Sum_probs=107.8
Q ss_pred hhhCChHHHHHHhCChhHHHH---HHHHhhhCCcEEEEec-eEEEecCCCCCCc-cchhhhhcccccc--cCCCCCcccc
Q 022620 110 QVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALVES-EIFCLHGGLSPSI-ETLDNIRNFDRVQ--EVPHEGPMCD 182 (294)
Q Consensus 110 ~~~~~~~e~~~~~~~~~~~~~---~~~~~~~lP~~~~i~~-~~~~vHgGi~~~~-~~~~~i~~~~r~~--~~~~~~~~~~ 182 (294)
..+++..++...+.....|.. ..++++.+|+.+..++ .+++.|+++++.. ..+.+++.+.+.. .....+...+
T Consensus 5 ~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~~ 84 (155)
T COG0639 5 ALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTHD 84 (155)
T ss_pred hhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccccc
Confidence 344455555555543323444 8999999999888777 8899999998865 5677777777765 6666677777
Q ss_pred ccccCCCC--CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCCCCC
Q 022620 183 LLWSDPDD--RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYC 251 (294)
Q Consensus 183 llW~dp~~--~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~ 251 (294)
.+|.++.. ...|.++++|....+ .+....|+..+..+.+.++|.....++........+|.+++++||
T Consensus 85 ~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 85 LLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 79998875 578888888888666 677888887777777999999999888877765789999999886
No 56
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.57 E-value=2.4e-06 Score=76.98 Aligned_cols=72 Identities=19% Similarity=0.235 Sum_probs=48.6
Q ss_pred CEEEEccCC--C-----------CHHHHHHHHHhcCCCCCCeEEEecCeecCCCC-cHHHHHHHHHchhhCCCcEEEEcC
Q 022620 36 PVTICGDIH--G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRG 101 (294)
Q Consensus 36 ~i~viGDiH--G-----------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~l~G 101 (294)
|+.+|||+| . ..+.++++++.+.....+.+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24567777877765556788999999998863 223333333322222234999999
Q ss_pred Cchhhh
Q 022620 102 NHESRQ 107 (294)
Q Consensus 102 NHE~~~ 107 (294)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999754
No 57
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.51 E-value=2.4e-06 Score=83.62 Aligned_cols=73 Identities=22% Similarity=0.331 Sum_probs=45.7
Q ss_pred CCCCEEEEccCC-CCH----HHHHHHHHhcC---------CCCCCeEEEecCeecC-CCCc---------------HHHH
Q 022620 33 VKSPVTICGDIH-GQF----HDLAELFQIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETV 82 (294)
Q Consensus 33 ~~~~i~viGDiH-G~~----~~l~~~l~~~~---------~~~~~~~vflGD~vDr-G~~s---------------~evl 82 (294)
.+.++++|||+| |.. ..+.++++.+. ....+.+|++||++|. |..+ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 456899999999 652 23444444332 1234678999999994 3211 1344
Q ss_pred HHHHHchhhCCCcEEEEcCCchhhh
Q 022620 83 TLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 83 ~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
.++..+... -.+++++||||...
T Consensus 322 ~~L~~L~~~--i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIPED--IKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhhcC--CeEEEecCCCcchh
Confidence 555555432 25999999999764
No 58
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.51 E-value=1.7e-06 Score=74.27 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=43.1
Q ss_pred CCEEEEccCCCCHH------------HHHHHHHhcCCCCCCeEEEecCeecCCCCc---HHHHHHHHHchhhCCCcEEEE
Q 022620 35 SPVTICGDIHGQFH------------DLAELFQIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 35 ~~i~viGDiHG~~~------------~l~~~l~~~~~~~~~~~vflGD~vDrG~~s---~evl~~l~~l~~~~p~~v~~l 99 (294)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999996332 122222223334557899999999976653 444444433222222348999
Q ss_pred cCCch
Q 022620 100 RGNHE 104 (294)
Q Consensus 100 ~GNHE 104 (294)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 59
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.50 E-value=2.3e-07 Score=80.83 Aligned_cols=71 Identities=21% Similarity=0.196 Sum_probs=54.0
Q ss_pred CCEEEEccCCCCHH----HHHHHHHhcCCCCCCeEEEecCeecCCCCcH-HHHHHHHHchhhCCCcEEEEcCCchhhh
Q 022620 35 SPVTICGDIHGQFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 35 ~~i~viGDiHG~~~----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
.++++++|+|.... .+.++++.+.....+.++++||++|.+.... ++..++..+.... .++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~~--~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAPL--GVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCCC--CEEEECCCccccc
Confidence 68999999998754 6777777666555678889999999887664 5666666654333 4999999999753
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.49 E-value=1.3e-06 Score=77.03 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=40.4
Q ss_pred EEEEccCCCCH--------------HHHHHHHHhcC--CCCCCeEEEecCeecCCCCc--HHHHHHHHHchhhCCCcEEE
Q 022620 37 VTICGDIHGQF--------------HDLAELFQIGG--KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITI 98 (294)
Q Consensus 37 i~viGDiHG~~--------------~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~ 98 (294)
|++++|||-.. +.+.++.+.+. .++.+.+++.||+++++... .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 57899999661 22233333322 13567788999999877532 2334444433 224899
Q ss_pred EcCCchh
Q 022620 99 LRGNHES 105 (294)
Q Consensus 99 l~GNHE~ 105 (294)
++||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 61
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.46 E-value=1.7e-05 Score=71.65 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=47.1
Q ss_pred CCCCEEEEccCC-C-----------CHHHHHHHHHhcCC--CCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEE
Q 022620 33 VKSPVTICGDIH-G-----------QFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 98 (294)
Q Consensus 33 ~~~~i~viGDiH-G-----------~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 98 (294)
...+++.|+|+| . ..+.|.++++.+.. ...+.+|+.||+++.|. .+-+..+.+.-...+..++.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 447899999999 1 24667788876533 23577889999999874 22222222221222335999
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
++||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 62
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.20 E-value=1.5e-06 Score=75.30 Aligned_cols=28 Identities=4% Similarity=0.023 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCCeEEEeeceeeecceE
Q 022620 207 QDISEQFNHTNNLKLIARAHQLVMDGFN 234 (294)
Q Consensus 207 ~~~~~~fl~~~~~~~iIrGH~~~~~G~~ 234 (294)
...+.+.++..+++++|.||++.+.-..
T Consensus 178 ~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 178 EEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 4456667788999999999999864443
No 63
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.20 E-value=9.7e-06 Score=70.74 Aligned_cols=201 Identities=16% Similarity=0.170 Sum_probs=99.7
Q ss_pred EEEccCCCC------HHHHHHHHHhcCCCCCCeEEEecCeecC--CCC-c----HHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 38 TICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDR--GYY-S----VETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 38 ~viGDiHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDr--G~~-s----~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
+.|||+|=. .+.|.+.|+... +..+.++++||++|- |.+ . .+|...|..+. +.+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 368999955 234445555432 245789999999863 433 2 23444444443 34468999999999
Q ss_pred hhhhHhhhCChHHHHHHhCChhHHHHHHHHhhhCCcEEEE---eceEEEecCCCCCCc-cchhhhhccccc-------cc
Q 022620 105 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALV---ESEIFCLHGGLSPSI-ETLDNIRNFDRV-------QE 173 (294)
Q Consensus 105 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~~~vHgGi~~~~-~~~~~i~~~~r~-------~~ 173 (294)
.. +...+ ....|. +.-+|-...+ +.+++++||..--.. ..-...+...+. ..
T Consensus 79 fl-l~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FL-LGKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HH-HHHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 44 32211 112221 1122322222 568999999652111 000011000000 00
Q ss_pred CCCC--CccccccccCCCCCCCCCcCCCCCc--c-ccCHHHHHHHHHhCCCeEEEeeceeeecceEEecCCeEEEEEcCC
Q 022620 174 VPHE--GPMCDLLWSDPDDRCGWGISPRGAG--Y-TFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAP 248 (294)
Q Consensus 174 ~~~~--~~~~~llW~dp~~~~~~~~~~rg~~--~-~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~ 248 (294)
.+.. ..+..-+|+.. .|........ + -..++.+.+-+++.+++.+|+||++.+..-.+.- ...|..+
T Consensus 142 l~l~~R~ri~~k~r~~s----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~---~~yi~lG- 213 (237)
T COG2908 142 LPLRVRRRIAYKIRSLS----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG---ITYINLG- 213 (237)
T ss_pred hHHHHHHHHHHHHHHhh----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC---ceEEecC-
Confidence 0000 00011234422 2222211111 1 1345666777889999999999999876554332 1122211
Q ss_pred CCCCCCCCcEEEEEEeCCCce
Q 022620 249 NYCYRCGNMASILEVDDCRSH 269 (294)
Q Consensus 249 ~y~~~~~n~~a~l~i~~~~~~ 269 (294)
.--..+++++++++...
T Consensus 214 ----dW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 214 ----DWVSEGSILEVDDGGLE 230 (237)
T ss_pred ----cchhcceEEEEecCcEE
Confidence 11256899999888543
No 64
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.14 E-value=5.8e-06 Score=73.98 Aligned_cols=72 Identities=22% Similarity=0.255 Sum_probs=49.7
Q ss_pred CCEEEEccCCC-C-----------HHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHH----HHHHHHchhhCCCcEEE
Q 022620 35 SPVTICGDIHG-Q-----------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 98 (294)
Q Consensus 35 ~~i~viGDiHG-~-----------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~l~~~~p~~v~~ 98 (294)
+|++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+. ..++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 58999999993 2 23455666655445568899999999987655443 34455555443345999
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 65
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.12 E-value=2.2e-05 Score=65.07 Aligned_cols=47 Identities=21% Similarity=0.292 Sum_probs=29.3
Q ss_pred CCCCeEEEecCeecCCCCc-HHHH-HHHHHchhh---C-CCcEEEEcCCchhh
Q 022620 60 CPDTNYLFMGDYVDRGYYS-VETV-TLLVALKVR---Y-PQRITILRGNHESR 106 (294)
Q Consensus 60 ~~~~~~vflGD~vDrG~~s-~evl-~~l~~l~~~---~-p~~v~~l~GNHE~~ 106 (294)
...+.++++||++|.+... .+.. ..+..++.. . +-.+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3467899999999987642 2222 222222221 1 23599999999974
No 66
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.09 E-value=2.9e-05 Score=69.53 Aligned_cols=70 Identities=19% Similarity=0.066 Sum_probs=42.9
Q ss_pred EEEEccCCCCHH------HH-HHHHHhcCCCCCCeEEEecCeecCCCCc-------H----HHHHHHHHchhhCCCcEEE
Q 022620 37 VTICGDIHGQFH------DL-AELFQIGGKCPDTNYLFMGDYVDRGYYS-------V----ETVTLLVALKVRYPQRITI 98 (294)
Q Consensus 37 i~viGDiHG~~~------~l-~~~l~~~~~~~~~~~vflGD~vDrG~~s-------~----evl~~l~~l~~~~p~~v~~ 98 (294)
++.++|+|-... .. ..+++.+.....+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 567999996322 12 3345555555567889999999976521 1 2223333322222346899
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999985
No 67
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.06 E-value=0.0001 Score=72.26 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=51.0
Q ss_pred CHHHHHHHHHhCCCe----EEEeeceeee--cceEE-ecCCeEEEEEcC--CCCCCCCCCcEEEEEEeCCCceEEEEEec
Q 022620 206 GQDISEQFNHTNNLK----LIARAHQLVM--DGFNW-AHEQKVVTIFSA--PNYCYRCGNMASILEVDDCRSHTFIQFEP 276 (294)
Q Consensus 206 g~~~~~~fl~~~~~~----~iIrGH~~~~--~G~~~-~~~~~~iti~Sa--~~y~~~~~n~~a~l~i~~~~~~~~~~~~~ 276 (294)
.++..+..|+.+|++ .||-||+||. .|-.. .++|+++.|+-+ ..|- ...+.|+.-.|...-...+.+-.|
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskAYq-k~TGIAGYTLiyNS~gl~L~~H~p 585 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKAYQ-KTTGIAGYTLIYNSYGLQLVAHQP 585 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhhhc-cccCccceEEEecCCcceeccCCC
Confidence 356667788889988 9999999996 56544 469999999974 2231 223446777787777777777666
Q ss_pred CC
Q 022620 277 AP 278 (294)
Q Consensus 277 ~~ 278 (294)
=.
T Consensus 586 F~ 587 (640)
T PF06874_consen 586 FE 587 (640)
T ss_pred CC
Confidence 44
No 68
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.05 E-value=0.00055 Score=61.46 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=51.6
Q ss_pred CCEEEEccCCCC------HHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchh--hCCCcEEEEcCCchhh
Q 022620 35 SPVTICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYPQRITILRGNHESR 106 (294)
Q Consensus 35 ~~i~viGDiHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~--~~p~~v~~l~GNHE~~ 106 (294)
++++.|+|+|-. .+.+.++++.+...+.+.+|+.||+.+.|. .+-...+.++-. ..+..++.++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 478999999987 345566777777666688999999999964 222222222222 4445699999999987
Q ss_pred hhHh
Q 022620 107 QITQ 110 (294)
Q Consensus 107 ~~~~ 110 (294)
....
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 6654
No 69
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.99 E-value=1.4e-05 Score=74.56 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=48.8
Q ss_pred CCEEEEccCC-C-----------CHHHHHHHHHhcCCCCCCeEEEecCeecCC-CCcHHHHHHHHH----chhhCCCcEE
Q 022620 35 SPVTICGDIH-G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYPQRIT 97 (294)
Q Consensus 35 ~~i~viGDiH-G-----------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~~s~evl~~l~~----l~~~~p~~v~ 97 (294)
||++.+||+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. .....+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6899999999 3 124556666666555668899999999985 445555444433 1112334699
Q ss_pred EEcCCchhh
Q 022620 98 ILRGNHESR 106 (294)
Q Consensus 98 ~l~GNHE~~ 106 (294)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 70
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.89 E-value=3.6e-05 Score=66.71 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=44.2
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHH--------------------------HHHHH
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVA 87 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl--------------------------~~l~~ 87 (294)
..+|.+++|.||+++.+.++.+.+.....|-++|+||++-....+-|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 4679999999999999999998887777889999999986544333322 23333
Q ss_pred chhhCCCcEEEEcCCchhhh
Q 022620 88 LKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 88 l~~~~p~~v~~l~GNHE~~~ 107 (294)
|.. .+--+++|+||||...
T Consensus 85 L~~-~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGE-LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHC-C-SEEEEE--TTS-SH
T ss_pred HHh-cCCcEEEecCCCCchH
Confidence 332 2335999999999844
No 71
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.89 E-value=2.8e-05 Score=70.64 Aligned_cols=71 Identities=20% Similarity=0.197 Sum_probs=43.1
Q ss_pred CCCEEEEccCCCC----HHHHHHHHHhcCCCCCCeEEEecCeecCCCCc-----HHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 34 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 34 ~~~i~viGDiHG~----~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
+-+++|+||.|.. .+.+.++.+. ....+.++++||+++.+... -..+..+..+....| ++.++||||
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD 79 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHE 79 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCcccc
Confidence 4579999999962 3333333332 23456788999999544322 123333333333444 899999999
Q ss_pred hhhh
Q 022620 105 SRQI 108 (294)
Q Consensus 105 ~~~~ 108 (294)
....
T Consensus 80 ~~~~ 83 (294)
T cd00839 80 ADYN 83 (294)
T ss_pred cccC
Confidence 8643
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.88 E-value=2.6e-05 Score=67.56 Aligned_cols=72 Identities=25% Similarity=0.263 Sum_probs=48.7
Q ss_pred CEEEEccCC-CCH--------------HHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHH----HHHHHHchhhCCCcE
Q 022620 36 PVTICGDIH-GQF--------------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRI 96 (294)
Q Consensus 36 ~i~viGDiH-G~~--------------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~l~~~~p~~v 96 (294)
|++.++|+| |.. ..|.++++.+.....+.+|+.||+++....+.+. ...+.+++. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 688999999 322 2466677666555667899999999987655443 333333321 12359
Q ss_pred EEEcCCchhhhh
Q 022620 97 TILRGNHESRQI 108 (294)
Q Consensus 97 ~~l~GNHE~~~~ 108 (294)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999997654
No 73
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.87 E-value=2.9e-05 Score=65.01 Aligned_cols=67 Identities=25% Similarity=0.381 Sum_probs=44.8
Q ss_pred EEEEccCCCCHHHH---------------HHHHHhcC--CCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEE
Q 022620 37 VTICGDIHGQFHDL---------------AELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 37 i~viGDiHG~~~~l---------------~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 99 (294)
+++|||+|=..... .++++.+. ..+.+.++++||+++++..+.. +..+.++. ..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~~----~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRLN----GRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhCC----CCeEEE
Confidence 47899999666532 22343332 2346889999999999886543 55554442 359999
Q ss_pred cCCchhhhh
Q 022620 100 RGNHESRQI 108 (294)
Q Consensus 100 ~GNHE~~~~ 108 (294)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997543
No 74
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.86 E-value=4.9e-05 Score=63.85 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCCCeEEEecCeecCCCCcH-HHHHHH--HHchhhCCCcEEEEcCCchhhh
Q 022620 50 LAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLL--VALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 50 l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l--~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
+.++++.+...+.+.+|++||+++...... +....+ ..+ ...+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 344555554455688999999998654322 222211 121 123346999999999753
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.80 E-value=6.3e-05 Score=66.11 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=44.4
Q ss_pred CCEEEEccCC-CCHHHH----------------HHHHHhcCCCCCCeEEEecCeecCCCC---cHHHHHHHHHchhhCCC
Q 022620 35 SPVTICGDIH-GQFHDL----------------AELFQIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYPQ 94 (294)
Q Consensus 35 ~~i~viGDiH-G~~~~l----------------~~~l~~~~~~~~~~~vflGD~vDrG~~---s~evl~~l~~l~~~~p~ 94 (294)
.++.+|+|+| |.-..+ .++.+.......+.++++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6899999999 543332 223333334456889999999976544 223334444433 3
Q ss_pred cEEEEcCCchhhh
Q 022620 95 RITILRGNHESRQ 107 (294)
Q Consensus 95 ~v~~l~GNHE~~~ 107 (294)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999653
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.80 E-value=6.3e-05 Score=71.59 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=43.8
Q ss_pred CCCCEEEEccCCCC------------HHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHH
Q 022620 33 VKSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 87 (294)
Q Consensus 33 ~~~~i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~ 87 (294)
..+||+.++|+|-. +..|.++++.+.....+-+|+.||++|+..-|.+++..+++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 46899999999943 55778888888766778899999999999888887655443
No 77
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.79 E-value=6.6e-05 Score=67.45 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=44.4
Q ss_pred EEEEccCCCCHHHHHHHHHhc---CCCCCCeEEEecCeecCCCC-cHHHH----------HHHHHc--hhhCCCcEEEEc
Q 022620 37 VTICGDIHGQFHDLAELFQIG---GKCPDTNYLFMGDYVDRGYY-SVETV----------TLLVAL--KVRYPQRITILR 100 (294)
Q Consensus 37 i~viGDiHG~~~~l~~~l~~~---~~~~~~~~vflGD~vDrG~~-s~evl----------~~l~~l--~~~~p~~v~~l~ 100 (294)
|+|+||+||+++.+-+.++.. ...+.+.+|++||+...+.. ..+.+ ++..-+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999887654433 23456788899999654432 22222 221111 122444479999
Q ss_pred CCchhh
Q 022620 101 GNHESR 106 (294)
Q Consensus 101 GNHE~~ 106 (294)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.59 E-value=0.00061 Score=56.06 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=78.1
Q ss_pred EEEccCCCCHHHHHHHHHhcC--CCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCCh
Q 022620 38 TICGDIHGQFHDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 115 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~ 115 (294)
.|+||+||+++.+-+-++.+. ..+-+-++++||+..-....-+ +.-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999877766532 2344778899999876555433 33333334456666899999998
Q ss_pred HHHHHHhCChhHHHHHHHHhhhCCcEEEEeceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCCCCCCC
Q 022620 116 DECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWG 195 (294)
Q Consensus 116 ~e~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~~~~~~ 195 (294)
.-+++++|.-+. .....++.. .
T Consensus 69 -----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~--------- 90 (150)
T cd07380 69 -----------------------------GVDILLTSEWPK-GISKLSKVP-------------------F--------- 90 (150)
T ss_pred -----------------------------CCCEEECCCCch-hhhhhCCCc-------------------c---------
Confidence 337888887321 110011100 0
Q ss_pred cCCCCCccccCHHHHHHHHHhCCCeEEEeeceee
Q 022620 196 ISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLV 229 (294)
Q Consensus 196 ~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~ 229 (294)
...+..-|...+.++++...-++.++||..+
T Consensus 91 ---~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 91 ---EETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ---cccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 0112235778999999999999999999864
No 79
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.53 E-value=0.00017 Score=68.94 Aligned_cols=72 Identities=21% Similarity=0.222 Sum_probs=47.3
Q ss_pred CCEEEEccCCCC--------HHH----HHHHHHhcCCCCCCeEEEecCeecCCCCcHHH----HHHHHHchhhCCCcEEE
Q 022620 35 SPVTICGDIHGQ--------FHD----LAELFQIGGKCPDTNYLFMGDYVDRGYYSVET----VTLLVALKVRYPQRITI 98 (294)
Q Consensus 35 ~~i~viGDiHG~--------~~~----l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ev----l~~l~~l~~~~p~~v~~ 98 (294)
+|++.++|+|-. .++ +.++++.+.....+.+++.||++|++..+... ..++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 589999999942 111 33455555555678899999999998655432 2344445432 235999
Q ss_pred EcCCchhhh
Q 022620 99 LRGNHESRQ 107 (294)
Q Consensus 99 l~GNHE~~~ 107 (294)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.46 E-value=0.00022 Score=63.19 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=40.2
Q ss_pred EEEccCC--CCH---HHHHHHHHhcCCC-----CCCeEEEecCeecCCCC------------c----HHHHHHHHHchhh
Q 022620 38 TICGDIH--GQF---HDLAELFQIGGKC-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 91 (294)
Q Consensus 38 ~viGDiH--G~~---~~l~~~l~~~~~~-----~~~~~vflGD~vDrG~~------------s----~evl~~l~~l~~~ 91 (294)
++|||+| +.. ..+..+++.+.-. ..+.+|++||++|+... . .++..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6799999 332 2233444433221 23778899999997310 0 1234444555432
Q ss_pred CCCcEEEEcCCchhhh
Q 022620 92 YPQRITILRGNHESRQ 107 (294)
Q Consensus 92 ~p~~v~~l~GNHE~~~ 107 (294)
-.|+++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 35999999999753
No 81
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.46 E-value=0.0099 Score=53.32 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=25.4
Q ss_pred cCHHHHHHHHHhCCCeEEEeeceeeecceEEec
Q 022620 205 FGQDISEQFNHTNNLKLIARAHQLVMDGFNWAH 237 (294)
Q Consensus 205 fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~ 237 (294)
-..+..+..|+..+-.+|+.||++ +++.+.+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 467888999999999999999998 4555544
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.45 E-value=0.00032 Score=63.73 Aligned_cols=73 Identities=19% Similarity=0.154 Sum_probs=51.7
Q ss_pred CCCCEEEEccCCCCHHH--HHHHHHhcCCCCCCeEEEecCeecC-C-CCcHHHHHHHHHchhhCCCcEEEEcCCchhhh
Q 022620 33 VKSPVTICGDIHGQFHD--LAELFQIGGKCPDTNYLFMGDYVDR-G-YYSVETVTLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~--l~~~l~~~~~~~~~~~vflGD~vDr-G-~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
...+|+-++|+|-.... ..+.+........+-+++.||++|+ . +....+...+..|+... .++++.||||...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 34579999999988766 2233333333333778899999995 4 44555777788887665 4999999998754
No 83
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.17 E-value=0.0015 Score=53.49 Aligned_cols=67 Identities=19% Similarity=0.204 Sum_probs=43.9
Q ss_pred CEEEEccCCC------------CHHHHHHH-HHhcC--CCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEc
Q 022620 36 PVTICGDIHG------------QFHDLAEL-FQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR 100 (294)
Q Consensus 36 ~i~viGDiHG------------~~~~l~~~-l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~ 100 (294)
.++.+||+|= +.+....+ |.... ..|++.+++|||+.-.--...+..+.+.+| |+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 4788999983 34444333 33222 356788999999976444444555555555 47799999
Q ss_pred CCchhh
Q 022620 101 GNHESR 106 (294)
Q Consensus 101 GNHE~~ 106 (294)
||||--
T Consensus 81 GNhDk~ 86 (186)
T COG4186 81 GNHDKC 86 (186)
T ss_pred CCCCCC
Confidence 999953
No 84
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.0033 Score=59.58 Aligned_cols=42 Identities=26% Similarity=0.427 Sum_probs=33.0
Q ss_pred CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhh
Q 022620 62 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 108 (294)
Q Consensus 62 ~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~ 108 (294)
.+++-++||+-||||++-.+++-|..+- .+=+-=||||...+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 3567789999999999999999988763 45566789996443
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.98 E-value=0.0014 Score=56.22 Aligned_cols=48 Identities=19% Similarity=0.313 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCeecCCCCc--HHHHHHHHHchhhCC----CcEEEEcCCchhh
Q 022620 59 KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP----QRITILRGNHESR 106 (294)
Q Consensus 59 ~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p----~~v~~l~GNHE~~ 106 (294)
....+.++||||++|.|+.+ .+..+.+.+++..++ ..++.|.||||.-
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 33567899999999999864 336666666654321 3588999999964
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.97 E-value=0.0014 Score=58.13 Aligned_cols=66 Identities=29% Similarity=0.331 Sum_probs=44.5
Q ss_pred CEEEEccCCCCH---------HHHHHHHHhcCCCCCC-eEEEecCeecCCCCcH-----HHHHHHHHchhhCCCcEEEEc
Q 022620 36 PVTICGDIHGQF---------HDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRITILR 100 (294)
Q Consensus 36 ~i~viGDiHG~~---------~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~s~-----evl~~l~~l~~~~p~~v~~l~ 100 (294)
+|+.++|+||.+ ..+..+++.......+ .++..||+++.++.+. .++..+..+.. .++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g~-----d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALGY-----DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcCC-----CEEee
Confidence 688999999876 5667777766544344 4566999999877543 45655555431 23556
Q ss_pred CCchhh
Q 022620 101 GNHESR 106 (294)
Q Consensus 101 GNHE~~ 106 (294)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 87
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.86 E-value=0.002 Score=54.17 Aligned_cols=50 Identities=22% Similarity=0.262 Sum_probs=31.6
Q ss_pred CCCCCCeEEEecCeecCCCCcH--H---HHHHHHHchh-hC----CCcEEEEcCCchhhh
Q 022620 58 GKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKV-RY----PQRITILRGNHESRQ 107 (294)
Q Consensus 58 ~~~~~~~~vflGD~vDrG~~s~--e---vl~~l~~l~~-~~----p~~v~~l~GNHE~~~ 107 (294)
.....+.+|++||++|.+.... + .+..+.++.. .. +..++.++||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3445678999999999876432 2 3333333221 11 345999999999763
No 88
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.85 E-value=0.0094 Score=54.24 Aligned_cols=72 Identities=22% Similarity=0.248 Sum_probs=42.5
Q ss_pred EEEEccCCCC--HHHHHHHHHhcCCC--CCCeEEEecCeecCCCCcH--H------HHHHHHHchhhCCC-cEEEEcCCc
Q 022620 37 VTICGDIHGQ--FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYPQ-RITILRGNH 103 (294)
Q Consensus 37 i~viGDiHG~--~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~--e------vl~~l~~l~~~~p~-~v~~l~GNH 103 (294)
..-.|+-.-+ ...+..+++.+... +.+.+|+.||+++.+.... + .-.+...++..+|. .++.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4445665422 34556666655433 5678889999998876421 1 12223334333332 599999999
Q ss_pred hhhhh
Q 022620 104 ESRQI 108 (294)
Q Consensus 104 E~~~~ 108 (294)
|....
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 98654
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.82 E-value=0.0034 Score=59.59 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=51.3
Q ss_pred CCEEEEccCCCC-------------HHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHH-chhhC--CCcEEE
Q 022620 35 SPVTICGDIHGQ-------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA-LKVRY--PQRITI 98 (294)
Q Consensus 35 ~~i~viGDiHG~-------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~-l~~~~--p~~v~~ 98 (294)
+|++-++|+|=. +.+|..+++.+.....+-+|+-||+.|+..-|.+++.++.. ++... .-.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999965 34556667776666668899999999998777665544333 22221 124999
Q ss_pred EcCCchhhh
Q 022620 99 LRGNHESRQ 107 (294)
Q Consensus 99 l~GNHE~~~ 107 (294)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999764
No 90
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.62 E-value=0.071 Score=51.80 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCCCCEEEEccCCC------------CHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHc
Q 022620 32 PVKSPVTICGDIHG------------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVAL 88 (294)
Q Consensus 32 ~~~~~i~viGDiHG------------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l 88 (294)
+...||.|-.|+|= .+..|..+|+.+.....+-++.-||+++-..-|.++|.....+
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 56789999999994 3557888999887777777888899998877777665554443
No 91
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=96.60 E-value=0.2 Score=46.26 Aligned_cols=80 Identities=18% Similarity=0.178 Sum_probs=44.6
Q ss_pred CCCCCCCCCCEEEEccCCCCHH-----------------HHH--HHHH-hcCCCCCCeEEEecCeecCCCCcHHHHHHHH
Q 022620 27 LSEPQPVKSPVTICGDIHGQFH-----------------DLA--ELFQ-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLV 86 (294)
Q Consensus 27 ~~~~~~~~~~i~viGDiHG~~~-----------------~l~--~~l~-~~~~~~~~~~vflGD~vDrG~~s~evl~~l~ 86 (294)
+..+..-+-+|+-+.|+|=... ++. ..++ .+.....+.+||+||.|+. .........++
T Consensus 46 lr~~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~ 124 (379)
T KOG1432|consen 46 LRFREDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLM 124 (379)
T ss_pred eeecCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHH
Confidence 3333444568999999995444 111 1121 1222345789999999995 44444433333
Q ss_pred Hch---hhCCCcEEEEcCCchhhh
Q 022620 87 ALK---VRYPQRITILRGNHESRQ 107 (294)
Q Consensus 87 ~l~---~~~p~~v~~l~GNHE~~~ 107 (294)
+-. +.+.=-..++.||||+..
T Consensus 125 kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 125 KAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred HHhhhHhhcCCCeEEEeccccccc
Confidence 322 111112568999999753
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.44 E-value=0.0044 Score=55.95 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=41.3
Q ss_pred CEEEEccCCCCH----------------HHHHHHHHhcCCCCCCeEEE-ecCeecCCCCc-----------HHHHHHHHH
Q 022620 36 PVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 87 (294)
Q Consensus 36 ~i~viGDiHG~~----------------~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----------~evl~~l~~ 87 (294)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 33566666654433444444 79999865421 235556655
Q ss_pred chhhCCCcEEEEcCCchh
Q 022620 88 LKVRYPQRITILRGNHES 105 (294)
Q Consensus 88 l~~~~p~~v~~l~GNHE~ 105 (294)
+.. -++..||||.
T Consensus 82 ~g~-----d~~~lGNHe~ 94 (277)
T cd07410 82 LGY-----DAGTLGNHEF 94 (277)
T ss_pred cCC-----CEEeecccCc
Confidence 542 2455699995
No 93
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.41 E-value=0.18 Score=41.12 Aligned_cols=116 Identities=23% Similarity=0.380 Sum_probs=76.9
Q ss_pred EEEEccCCC--CHHHHHHHHHhcCCCCC-CeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhC
Q 022620 37 VTICGDIHG--QFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 113 (294)
Q Consensus 37 i~viGDiHG--~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~ 113 (294)
+.|+||+|= ...+|-.-++++-.+++ +.++++|++. |.|.++++..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 678999984 23344334444334443 6788999976 458999998875 4699999987753
Q ss_pred ChHHHHHHhCChhHHHHHHHHhhhCCcEEEE--e-ceEEEecCCCCCCccchhhhhcccccccCCCCCccccccccCCCC
Q 022620 114 FYDECLRKYGNANIWKIFTDLFDYFPLTALV--E-SEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDD 190 (294)
Q Consensus 114 ~~~e~~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~~~vHgGi~~~~~~~~~i~~~~r~~~~~~~~~~~~llW~dp~~ 190 (294)
.+| |..-++ + =++-++||--- +=|+||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcEe--------------------------ecCCCH--
Confidence 112 322222 2 27889998311 236665
Q ss_pred CCCCCcCCCCCccccCHHHHHHHHHhCCCeEEEeeceeeecceEE
Q 022620 191 RCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNW 235 (294)
Q Consensus 191 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iIrGH~~~~~G~~~ 235 (294)
+++.-.-+..+++.++.|||+..+-|+.
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 4555666778999999999998777654
No 94
>PLN02533 probable purple acid phosphatase
Probab=96.41 E-value=0.0043 Score=59.72 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=42.9
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcH---HHHHHHHHchhhCCCcEEEEcCCchhhh
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~---evl~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
.-+++++||+|-. ......++.+.....+-++++||++.-+...- +-.+++..+....| ++.++||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 22223444444445677889999997543221 12233333333344 889999999753
No 95
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=96.22 E-value=0.0097 Score=49.95 Aligned_cols=45 Identities=27% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCCCeEEEecCeec--CCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhh
Q 022620 59 KCPDTNYLFMGDYVD--RGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 59 ~~~~~~~vflGD~vD--rG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
..+++.+++-||+-- |=+...+=+.+|-.| |+.-+++|||||++.
T Consensus 41 v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 41 VSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred CChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 345666777899842 344455556666665 577899999999874
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.19 E-value=0.015 Score=51.16 Aligned_cols=73 Identities=19% Similarity=0.258 Sum_probs=47.5
Q ss_pred CCCCEEEEccCCCCHHHHH----------------HHHH-hcCCCCCCeEEEecCeecCCCC-----cHHHHHHHHHchh
Q 022620 33 VKSPVTICGDIHGQFHDLA----------------ELFQ-IGGKCPDTNYLFMGDYVDRGYY-----SVETVTLLVALKV 90 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~----------------~~l~-~~~~~~~~~~vflGD~vDrG~~-----s~evl~~l~~l~~ 90 (294)
...++.||+|+|=-++... +.+. .+..-..+++|++||+-.-.+. ..++-.++..+..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3478999999997666443 2222 2223345789999999765433 3445555555544
Q ss_pred hCCCcEEEEcCCchhhhh
Q 022620 91 RYPQRITILRGNHESRQI 108 (294)
Q Consensus 91 ~~p~~v~~l~GNHE~~~~ 108 (294)
. .+++++||||...-
T Consensus 98 ~---evi~i~GNHD~~i~ 112 (235)
T COG1407 98 R---EVIIIRGNHDNGIE 112 (235)
T ss_pred C---cEEEEeccCCCccc
Confidence 3 49999999997543
No 97
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.13 E-value=0.32 Score=46.87 Aligned_cols=52 Identities=8% Similarity=0.112 Sum_probs=33.5
Q ss_pred eEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCcEEEEEEeCC-CceEEEEEec
Q 022620 220 KLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDC-RSHTFIQFEP 276 (294)
Q Consensus 220 ~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~~a~l~i~~~-~~~~~~~~~~ 276 (294)
+++.+||++. .|+....+.+++...|.+... -.+-++.|+.. ......++..
T Consensus 420 Dv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qT----efqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 420 DVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQT----EFQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred cEEEEccccc-cceeEEeccceEEeeeecchh----ccceEEEecCcccceeEEeccc
Confidence 7899999997 688777777888888876653 23344445443 3344444433
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.87 E-value=0.017 Score=51.70 Aligned_cols=65 Identities=23% Similarity=0.246 Sum_probs=41.1
Q ss_pred CEEEEccCCCCH----------HHHHHHHHhcCCCCCCeEEEecCeecCCCCc-----HHHHHHHHHchhhCCCcEEEEc
Q 022620 36 PVTICGDIHGQF----------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 100 (294)
Q Consensus 36 ~i~viGDiHG~~----------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l~ 100 (294)
+|+-++|+||++ ..+..+++.....+..-++..||.++..+.+ ..++..+..+... + +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~d----~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGYD----A-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCCc----E-Ecc
Confidence 578899999974 4456666655433444555699999875532 3445555554322 3 456
Q ss_pred CCchh
Q 022620 101 GNHES 105 (294)
Q Consensus 101 GNHE~ 105 (294)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 99
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.81 E-value=0.022 Score=48.78 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=40.2
Q ss_pred cCCCCHHHHHHHHHhcC-CCCCCeEEEecCeecCCCCcHH-HHHHHHHchhhC---------------------CCcEEE
Q 022620 42 DIHGQFHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------PQRITI 98 (294)
Q Consensus 42 DiHG~~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~e-vl~~l~~l~~~~---------------------p~~v~~ 98 (294)
|++|+=.=|.++++.+. ....+.++||||++|.|--+-+ =.....+.+..+ ...++.
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55676666677776543 2345778899999998753322 223333333221 135789
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
|+||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999973
No 100
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.80 E-value=0.022 Score=51.09 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=39.4
Q ss_pred CEEEEccCCCC--H--HHHHHHH-HhcCCCCCCeEEEecCee-cCCCCcH------HHHHHHHH-chhhCCCcEEEEcCC
Q 022620 36 PVTICGDIHGQ--F--HDLAELF-QIGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYPQRITILRGN 102 (294)
Q Consensus 36 ~i~viGDiHG~--~--~~l~~~l-~~~~~~~~~~~vflGD~v-DrG~~s~------evl~~l~~-l~~~~p~~v~~l~GN 102 (294)
+++++||.=.. . .++.+.+ +.+...+.+.+|++||++ +-|..+. +.+..+.. +.... -++.++||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~--P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQV--PWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcC--CeEEecCC
Confidence 57899998653 1 2333333 333334557788999997 5553221 22222222 21122 39999999
Q ss_pred chhh
Q 022620 103 HESR 106 (294)
Q Consensus 103 HE~~ 106 (294)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 101
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.66 E-value=1 Score=40.36 Aligned_cols=50 Identities=16% Similarity=0.198 Sum_probs=30.5
Q ss_pred eEEEeeceeeecceEEec--CCeEEEEEcCCCCCCCCCCcEEEEEEeC-CCceEEEEE
Q 022620 220 KLIARAHQLVMDGFNWAH--EQKVVTIFSAPNYCYRCGNMASILEVDD-CRSHTFIQF 274 (294)
Q Consensus 220 ~~iIrGH~~~~~G~~~~~--~~~~iti~Sa~~y~~~~~n~~a~l~i~~-~~~~~~~~~ 274 (294)
++++.||++.. |..... +++-+.+.|.|.+.. .|.++.+|= ++++..++|
T Consensus 205 hVyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 78999999974 444332 356677888888852 344444542 455555443
No 102
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.44 E-value=0.026 Score=51.35 Aligned_cols=66 Identities=24% Similarity=0.330 Sum_probs=42.7
Q ss_pred CEEEEccCCCCHH--------------HHHHHHHhcCCCCC-CeEEEecCeecCCCC-c-----HHHHHHHHHchhhCCC
Q 022620 36 PVTICGDIHGQFH--------------DLAELFQIGGKCPD-TNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYPQ 94 (294)
Q Consensus 36 ~i~viGDiHG~~~--------------~l~~~l~~~~~~~~-~~~vflGD~vDrG~~-s-----~evl~~l~~l~~~~p~ 94 (294)
+|+.++|+||++. .+..+++....... ..++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999998854 35666665543333 345569999976653 2 2456666666533
Q ss_pred cEEEEcCCchhh
Q 022620 95 RITILRGNHESR 106 (294)
Q Consensus 95 ~v~~l~GNHE~~ 106 (294)
.+..||||.-
T Consensus 79 --a~t~GNHefd 88 (288)
T cd07412 79 --ASAVGNHEFD 88 (288)
T ss_pred --eeeecccccc
Confidence 3566999953
No 103
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.14 E-value=0.047 Score=50.51 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=49.2
Q ss_pred CCEEEEccCCCCHHHHHHHH---HhcCCCCCCeEEEecCeec-CCC---CcHHHHHHHHH---------chhhCCCcEEE
Q 022620 35 SPVTICGDIHGQFHDLAELF---QIGGKCPDTNYLFMGDYVD-RGY---YSVETVTLLVA---------LKVRYPQRITI 98 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l---~~~~~~~~~~~vflGD~vD-rG~---~s~evl~~l~~---------l~~~~p~~v~~ 98 (294)
+||.|-|--||.++.+-+-+ ++.|-.+.+.++++||+=. |.. +++.|=..-.+ =...+|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 68999999999999887444 4555567788999999832 211 12222111111 22345645678
Q ss_pred EcCCchhhhhHh
Q 022620 99 LRGNHESRQITQ 110 (294)
Q Consensus 99 l~GNHE~~~~~~ 110 (294)
|=||||.++.-.
T Consensus 81 IGGNHEAsnyL~ 92 (456)
T KOG2863|consen 81 IGGNHEASNYLQ 92 (456)
T ss_pred ecCchHHHHHHH
Confidence 999999987543
No 104
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.82 E-value=0.071 Score=48.34 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=40.1
Q ss_pred CEEEEccCCCCH---------------------HHHHHHHHhcCCCCCCeEE-EecCeecCCCC-----cHHHHHHHHHc
Q 022620 36 PVTICGDIHGQF---------------------HDLAELFQIGGKCPDTNYL-FMGDYVDRGYY-----SVETVTLLVAL 88 (294)
Q Consensus 36 ~i~viGDiHG~~---------------------~~l~~~l~~~~~~~~~~~v-flGD~vDrG~~-----s~evl~~l~~l 88 (294)
+|+-++|+||++ ..+..+++.......+.++ -.||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 477889999864 4455566655433334444 48999987653 34455555555
Q ss_pred hhhCCCcEEEEcCCchhh
Q 022620 89 KVRYPQRITILRGNHESR 106 (294)
Q Consensus 89 ~~~~p~~v~~l~GNHE~~ 106 (294)
... .+..||||..
T Consensus 82 g~D-----~~~lGNHefd 94 (281)
T cd07409 82 GYD-----AMTLGNHEFD 94 (281)
T ss_pred CCC-----EEEecccccc
Confidence 422 3455999953
No 105
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.69 E-value=0.057 Score=48.42 Aligned_cols=65 Identities=23% Similarity=0.172 Sum_probs=38.6
Q ss_pred CEEEEccCCCCH----------------------HHHHHHHHhcCCC-CCCeE-EEecCeecCCCCc-----HHHHHHHH
Q 022620 36 PVTICGDIHGQF----------------------HDLAELFQIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 86 (294)
Q Consensus 36 ~i~viGDiHG~~----------------------~~l~~~l~~~~~~-~~~~~-vflGD~vDrG~~s-----~evl~~l~ 86 (294)
.|+.++|+||.+ ..+..+++..... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467788888874 3344555555433 34444 4599999876533 34555555
Q ss_pred HchhhCCCcEEEEcCCchhh
Q 022620 87 ALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 87 ~l~~~~p~~v~~l~GNHE~~ 106 (294)
.+. --.+. ||||..
T Consensus 82 ~~g-----~da~~-GNHefd 95 (264)
T cd07411 82 ALG-----VDAMV-GHWEFT 95 (264)
T ss_pred hhC-----CeEEe-cccccc
Confidence 543 12334 999953
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=94.14 E-value=0.11 Score=46.44 Aligned_cols=65 Identities=28% Similarity=0.233 Sum_probs=42.5
Q ss_pred CEEEEccCC----------CCHHHHHHHHHhcCCCCCC-eEEEecCeecCCCC-----cHHHHHHHHHchhhCCCcEEEE
Q 022620 36 PVTICGDIH----------GQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 36 ~i~viGDiH----------G~~~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~-----s~evl~~l~~l~~~~p~~v~~l 99 (294)
+|+-+.|+| |.+..+..++++......+ -++..||+++..+. ...++..+..+.. -+..
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEe
Confidence 355566777 4567777778766544344 45569999987652 3456666666642 3567
Q ss_pred cCCchh
Q 022620 100 RGNHES 105 (294)
Q Consensus 100 ~GNHE~ 105 (294)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899995
No 107
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=93.63 E-value=0.15 Score=46.03 Aligned_cols=67 Identities=15% Similarity=0.107 Sum_probs=49.5
Q ss_pred CCEEEEccCCCC--HHHHHHHHHhcCCCC-CCeEEEecCeecCC-CCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 35 SPVTICGDIHGQ--FHDLAELFQIGGKCP-DTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 35 ~~i~viGDiHG~--~~~l~~~l~~~~~~~-~~~~vflGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
+||.++|||=|. ...+...|..+.... .+.+|.-||...-| .-+-++.+.|.++... ++.+ |||+..
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 589999999999 567777777665433 35555689998765 4577888888877544 6666 999964
No 108
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.60 E-value=0.099 Score=56.60 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=43.4
Q ss_pred CCEEEEccCCCCH---HHHHHHHHhcCCCCCCeEEE-ecCeecCCCCc-----HHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 35 SPVTICGDIHGQF---HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 35 ~~i~viGDiHG~~---~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
.+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+..+.. -.+..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 4688999999875 44555565544333344544 89999876643 345666666532 3569999996
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=92.62 E-value=0.16 Score=46.24 Aligned_cols=66 Identities=18% Similarity=0.068 Sum_probs=37.8
Q ss_pred CEEEEccCCCCHHH----------HHHHHHhcCC-----CCCCeEEEecCeecCCC-----CcHHHHHHHHHchhhCCCc
Q 022620 36 PVTICGDIHGQFHD----------LAELFQIGGK-----CPDTNYLFMGDYVDRGY-----YSVETVTLLVALKVRYPQR 95 (294)
Q Consensus 36 ~i~viGDiHG~~~~----------l~~~l~~~~~-----~~~~~~vflGD~vDrG~-----~s~evl~~l~~l~~~~p~~ 95 (294)
.|+.++|+||++.. +..+++.... .+...++-.||.+...+ ....+++.+..+...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47889999998533 4445544322 22233444899984333 223455666666533
Q ss_pred EEEEcCCchhh
Q 022620 96 ITILRGNHESR 106 (294)
Q Consensus 96 v~~l~GNHE~~ 106 (294)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 455999953
No 110
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=92.16 E-value=1.2 Score=42.85 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCCeEEEeeceeeecceEEecCCeE
Q 022620 208 DISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKV 241 (294)
Q Consensus 208 ~~~~~fl~~~~~~~iIrGH~~~~~G~~~~~~~~~ 241 (294)
..++..+-++++++++-||.+.=+......+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3689999999999999999997666555555544
No 111
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.45 E-value=0.37 Score=45.77 Aligned_cols=74 Identities=19% Similarity=0.344 Sum_probs=45.8
Q ss_pred CCCCEEEEccCC--C---------CHHH------HHHHHHhcCC-CCCCeEEEecCeecCCCC--cHHHHHHHHHchhhC
Q 022620 33 VKSPVTICGDIH--G---------QFHD------LAELFQIGGK-CPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRY 92 (294)
Q Consensus 33 ~~~~i~viGDiH--G---------~~~~------l~~~l~~~~~-~~~~~~vflGD~vDrG~~--s~evl~~l~~l~~~~ 92 (294)
...++..|+|-| | -++. +.+.++.... -..+.++||||++|-|.. .-|=-....+++..+
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 456899999976 3 2222 2333333322 234667789999998864 333444455555544
Q ss_pred CC----cEEEEcCCchhh
Q 022620 93 PQ----RITILRGNHESR 106 (294)
Q Consensus 93 p~----~v~~l~GNHE~~ 106 (294)
|. .++.+.||||--
T Consensus 127 ~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCCCCeeEEeCCccccc
Confidence 43 689999999963
No 112
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=90.86 E-value=0.58 Score=41.93 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=45.8
Q ss_pred CEEEEccCCCCHH--HHHHHHHhcCCCC-CCeEEEecCeecCC-CCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 36 PVTICGDIHGQFH--DLAELFQIGGKCP-DTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 36 ~i~viGDiHG~~~--~l~~~l~~~~~~~-~~~~vflGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
||.+||||=|... .+...|..+.... .+.++.-||..--| .-+-++...|..+... ++.+ ||||..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 6899999999876 4456666554332 34455579998766 3577888888887644 5555 999854
No 113
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=90.74 E-value=0.4 Score=44.23 Aligned_cols=65 Identities=25% Similarity=0.248 Sum_probs=40.9
Q ss_pred CEEEEccCCCCHH------HHHHHHHhcCC-----CCCCeEEEecCeecCCCC-------------cHHHHHHHHHchhh
Q 022620 36 PVTICGDIHGQFH------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 91 (294)
Q Consensus 36 ~i~viGDiHG~~~------~l~~~l~~~~~-----~~~~~~vflGD~vDrG~~-------------s~evl~~l~~l~~~ 91 (294)
.|+-+.|+||++. .+..+++.... .+...++..||.+.-++. ...+++++.++...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 4677899999964 44444444322 223344458999875442 44567777777533
Q ss_pred CCCcEEEEcCCchh
Q 022620 92 YPQRITILRGNHES 105 (294)
Q Consensus 92 ~p~~v~~l~GNHE~ 105 (294)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 578999994
No 114
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=90.34 E-value=0.35 Score=47.74 Aligned_cols=69 Identities=30% Similarity=0.317 Sum_probs=45.1
Q ss_pred CCCCEEEEccCCCCHH------------HHH---HHHHhcCCCCCCeEE-EecCeecCCC------CcHHHHHHHHHchh
Q 022620 33 VKSPVTICGDIHGQFH------------DLA---ELFQIGGKCPDTNYL-FMGDYVDRGY------YSVETVTLLVALKV 90 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~------------~l~---~~l~~~~~~~~~~~v-flGD~vDrG~------~s~evl~~l~~l~~ 90 (294)
.+-+|+-..|+||++. .+. .+++.........++ =.||+++..+ .....+.++..|+-
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 4567888999999999 333 333333322233444 4899999733 34557777777763
Q ss_pred hCCCcEEEEcCCchhh
Q 022620 91 RYPQRITILRGNHESR 106 (294)
Q Consensus 91 ~~p~~v~~l~GNHE~~ 106 (294)
. .+-.||||.-
T Consensus 105 D-----a~tiGNHEFd 115 (517)
T COG0737 105 D-----AMTLGNHEFD 115 (517)
T ss_pred c-----EEeecccccc
Confidence 3 5788999964
No 115
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.34 E-value=0.43 Score=40.92 Aligned_cols=72 Identities=11% Similarity=0.164 Sum_probs=40.6
Q ss_pred EEEEccCCCC-----HHHHHHHHHhcC-CCCCCeEEEecCeecCCCCcH----------HHHHHHHHchhh-----CCCc
Q 022620 37 VTICGDIHGQ-----FHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVR-----YPQR 95 (294)
Q Consensus 37 i~viGDiHG~-----~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~----------evl~~l~~l~~~-----~p~~ 95 (294)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+... .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888765 567777887776 556678999999999632111 111222222211 1237
Q ss_pred EEEEcCCchhhhh
Q 022620 96 ITILRGNHESRQI 108 (294)
Q Consensus 96 v~~l~GNHE~~~~ 108 (294)
+++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 116
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=89.61 E-value=0.43 Score=43.35 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=39.4
Q ss_pred CCEEEEccCCCCHH-------------HHHHHHHhc----CCCCCCe-EEEecCeecCCCC-------cHHHHHHHHHch
Q 022620 35 SPVTICGDIHGQFH-------------DLAELFQIG----GKCPDTN-YLFMGDYVDRGYY-------SVETVTLLVALK 89 (294)
Q Consensus 35 ~~i~viGDiHG~~~-------------~l~~~l~~~----~~~~~~~-~vflGD~vDrG~~-------s~evl~~l~~l~ 89 (294)
-+|+-+.|+||++. .+.++.+.. +...... ++-.||.+..-+. ...+++++..+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 46888999999864 122322221 2222233 4458999876432 233566666664
Q ss_pred hhCCCcEEEEcCCchhh
Q 022620 90 VRYPQRITILRGNHESR 106 (294)
Q Consensus 90 ~~~p~~v~~l~GNHE~~ 106 (294)
--.+..||||..
T Consensus 86 -----yDa~tlGNHEFd 97 (282)
T cd07407 86 -----YDLLTIGNHELY 97 (282)
T ss_pred -----CcEEeecccccC
Confidence 346889999974
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=89.17 E-value=0.54 Score=47.82 Aligned_cols=69 Identities=19% Similarity=0.164 Sum_probs=44.1
Q ss_pred CCCCCEEEEccCCCCHHH----------------HHHHHHhcCCC-CCCeEEEecCeecCCCCc-------------HHH
Q 022620 32 PVKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VET 81 (294)
Q Consensus 32 ~~~~~i~viGDiHG~~~~----------------l~~~l~~~~~~-~~~~~vflGD~vDrG~~s-------------~ev 81 (294)
....+|+-..|+||++.. +..+++.+... ++..+|-.||.+...+.+ ..+
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 356789999999998743 33444444322 333455589999865532 135
Q ss_pred HHHHHHchhhCCCcEEEEcCCchh
Q 022620 82 VTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 82 l~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
+..+..|.. -....||||.
T Consensus 103 i~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 103 YKAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHHhcCC-----cEEeccchhh
Confidence 666666653 3578999995
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=88.93 E-value=0.53 Score=47.67 Aligned_cols=66 Identities=20% Similarity=0.146 Sum_probs=41.2
Q ss_pred CCEEEEccCCCCHHH----------------HHHHHHhcCCC-CCCeEEEecCeecCCCCc-------------HHHHHH
Q 022620 35 SPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS-------------VETVTL 84 (294)
Q Consensus 35 ~~i~viGDiHG~~~~----------------l~~~l~~~~~~-~~~~~vflGD~vDrG~~s-------------~evl~~ 84 (294)
-+|+-..|+||++.. +..+++..... ++..++-.||.+...+.+ ..++..
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 468889999999753 33445444322 233444589999854432 235666
Q ss_pred HHHchhhCCCcEEEEcCCchh
Q 022620 85 LVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 85 l~~l~~~~p~~v~~l~GNHE~ 105 (294)
+..|.. -....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 666643 3578999994
No 119
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=88.44 E-value=0.15 Score=48.99 Aligned_cols=107 Identities=15% Similarity=0.052 Sum_probs=79.2
Q ss_pred HHHHHHHHhccCcCCCC---C--CCCCCEEEEccCCCCHHHHHHHHHhcCCCCC-CeEEEecCeecCCCCcHHHHHHHHH
Q 022620 14 LDEQISQLMQCKPLSEP---Q--PVKSPVTICGDIHGQFHDLAELFQIGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVA 87 (294)
Q Consensus 14 ~~~~i~~~~~~~~~~~~---~--~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~ 87 (294)
.+.+|+.-.+.-.+..+ + .-+.-.+.++|.||.+.++.++++.- +.. .-+++-|++++++....+.+..+..
T Consensus 20 fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A~~~l~~ 97 (476)
T KOG0376|consen 20 FDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKALLDLEK 97 (476)
T ss_pred HHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHHHHHHHH
Confidence 45555555444444332 1 11234788999999999999888764 322 3488899999999999999999999
Q ss_pred chhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHh
Q 022620 88 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKY 122 (294)
Q Consensus 88 l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~ 122 (294)
.+...|....+.|++||.-.+-..++|..++...+
T Consensus 98 ~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 98 VKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred hhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999988777666665444333
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.88 E-value=0.72 Score=50.11 Aligned_cols=67 Identities=24% Similarity=0.271 Sum_probs=41.8
Q ss_pred CCCEEEEccCCCCHH----------------HHHHHHHhcCCCCCCeEEE-ecCeecCCCC--------------cHHHH
Q 022620 34 KSPVTICGDIHGQFH----------------DLAELFQIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 82 (294)
Q Consensus 34 ~~~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~--------------s~evl 82 (294)
.-+|+..+|+||++. .+..+++.+.......+++ .||.+...+- ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 457899999999864 3344555443223344554 8999986541 22455
Q ss_pred HHHHHchhhCCCcEEEEcCCchh
Q 022620 83 TLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 83 ~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
..+..|. --....||||.
T Consensus 121 ~~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHHhhcC-----ccEEeeccccc
Confidence 6565554 23567999995
No 121
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=87.43 E-value=7 Score=33.21 Aligned_cols=85 Identities=19% Similarity=0.310 Sum_probs=61.9
Q ss_pred CeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChH---HH-------------HHHhCChh
Q 022620 63 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYD---EC-------------LRKYGNAN 126 (294)
Q Consensus 63 ~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~---e~-------------~~~~~~~~ 126 (294)
..+|++|- |.+.-|+++++..++..+-++-++ .|+-|.|..+....|.. ++ .+.| ...
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 45888886 889999999999999988765555 89999998877555432 11 1111 134
Q ss_pred HHHHHHHHhhhCCcEEEEeceEEEecC
Q 022620 127 IWKIFTDLFDYFPLTALVESEIFCLHG 153 (294)
Q Consensus 127 ~~~~~~~~~~~lP~~~~i~~~~~~vHg 153 (294)
++..+...+-++++...+..+++++.|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 566777778888888877777888877
No 122
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=85.77 E-value=1.4 Score=41.94 Aligned_cols=77 Identities=9% Similarity=0.001 Sum_probs=44.5
Q ss_pred CCCCCCCCEEEEccCC-CCHHHH--HHHHHh-cCCCCCCeEEEecCeecCCCCcH------HHHHHHHHchh-hCCCcEE
Q 022620 29 EPQPVKSPVTICGDIH-GQFHDL--AELFQI-GGKCPDTNYLFMGDYVDRGYYSV------ETVTLLVALKV-RYPQRIT 97 (294)
Q Consensus 29 ~~~~~~~~i~viGDiH-G~~~~l--~~~l~~-~~~~~~~~~vflGD~vDrG~~s~------evl~~l~~l~~-~~p~~v~ 97 (294)
+.+..+-+.+++||-= |..... .+.+.. +...+.+-++-+||-++.|..++ +..+.+..-.. .-.-..+
T Consensus 21 ~~~~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy 100 (394)
T PTZ00422 21 YSVKAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFF 100 (394)
T ss_pred cccCCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeE
Confidence 3345566899999963 333322 122322 22345567778999987777653 23444443221 0011389
Q ss_pred EEcCCchh
Q 022620 98 ILRGNHES 105 (294)
Q Consensus 98 ~l~GNHE~ 105 (294)
+++||||.
T Consensus 101 ~vLGNHDy 108 (394)
T PTZ00422 101 TVLGQADW 108 (394)
T ss_pred EeCCcccc
Confidence 99999997
No 123
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=84.98 E-value=1.3 Score=46.05 Aligned_cols=67 Identities=22% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCCEEEEccCCCCHHH----------------HHHHHHhcCCC-CCCeEEEecCeecCCCCc--------------HHHH
Q 022620 34 KSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYYS--------------VETV 82 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~----------------l~~~l~~~~~~-~~~~~vflGD~vDrG~~s--------------~evl 82 (294)
.-+|+-..|+||++.. +..+++.+... ++..+|-.||++..-+.. ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 4578889999999643 23334443222 233455589998754321 2367
Q ss_pred HHHHHchhhCCCcEEEEcCCchh
Q 022620 83 TLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 83 ~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
..+..|.. -....||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 77776653 3588899995
No 124
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.99 E-value=3.4 Score=39.76 Aligned_cols=70 Identities=21% Similarity=0.376 Sum_probs=49.8
Q ss_pred CCCCEEEEccCCCCHHHHHHHHHhcCCC--CCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCc
Q 022620 33 VKSPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 103 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNH 103 (294)
.+.+|.|+||.-|+++.|.+-.+.+... +-+.++++|++.+--.++-|++.+...-+ ..|--++++-+|-
T Consensus 4 ~~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 4 ADAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CCceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 3479999999999999887766655432 34778899999987666777777665543 3444466665554
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=83.59 E-value=2.4 Score=42.22 Aligned_cols=65 Identities=20% Similarity=0.179 Sum_probs=38.7
Q ss_pred CEEEEccCCCCHHH---------------------HHHHHHhcCC-CCCCeEEEecCeecCCCC-----cHHHHHHHHHc
Q 022620 36 PVTICGDIHGQFHD---------------------LAELFQIGGK-CPDTNYLFMGDYVDRGYY-----SVETVTLLVAL 88 (294)
Q Consensus 36 ~i~viGDiHG~~~~---------------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~-----s~evl~~l~~l 88 (294)
.|+-+.|+||++.. +..+++.... .++..++..||.+...+. ....++++.++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 35667888887543 3344444332 233445568999875542 23456666665
Q ss_pred hhhCCCcEEEEcCCchh
Q 022620 89 KVRYPQRITILRGNHES 105 (294)
Q Consensus 89 ~~~~p~~v~~l~GNHE~ 105 (294)
.. -.+..||||.
T Consensus 82 g~-----Da~~lGNHEF 93 (550)
T TIGR01530 82 GF-----DFFTLGNHEF 93 (550)
T ss_pred CC-----CEEEeccccc
Confidence 42 3688999995
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=83.37 E-value=1.6 Score=43.41 Aligned_cols=69 Identities=19% Similarity=0.096 Sum_probs=39.6
Q ss_pred CCCCEEEEccCCCCHH----------HHHHHHHhcC-----CCCCCeEEEecCeecCCCC-----cHHHHHHHHHchhhC
Q 022620 33 VKSPVTICGDIHGQFH----------DLAELFQIGG-----KCPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRY 92 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~----------~l~~~l~~~~-----~~~~~~~vflGD~vDrG~~-----s~evl~~l~~l~~~~ 92 (294)
.+-.|+-+.|+||++. .+..+++... ..+...++..||.+...+. ...+++++..+...
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D- 111 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD- 111 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC-
Confidence 4456888999999874 2233343332 1233334458999864332 23455666666433
Q ss_pred CCcEEEEcCCchhh
Q 022620 93 PQRITILRGNHESR 106 (294)
Q Consensus 93 p~~v~~l~GNHE~~ 106 (294)
.+..||||.-
T Consensus 112 ----a~tlGNHEFD 121 (551)
T PRK09558 112 ----AMAVGNHEFD 121 (551)
T ss_pred ----EEcccccccC
Confidence 3455999953
No 127
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=83.16 E-value=1.8 Score=38.95 Aligned_cols=67 Identities=18% Similarity=0.191 Sum_probs=43.7
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhh
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 107 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~ 107 (294)
..|.+.|+|.|....... ..++.|.++.+||+..-|. +-||..+=..+-..-=.+-+.|.||||..+
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcceeeEEEeeccceee
Confidence 358999999999766543 2355566788999977554 456655433332211124678999999754
No 128
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=78.88 E-value=2.8 Score=43.59 Aligned_cols=68 Identities=22% Similarity=0.180 Sum_probs=41.4
Q ss_pred CCCCEEEEccCCCCHHH----------------HHHHHHhcCCC-CCCeEEEecCeecCCCC------------------
Q 022620 33 VKSPVTICGDIHGQFHD----------------LAELFQIGGKC-PDTNYLFMGDYVDRGYY------------------ 77 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~----------------l~~~l~~~~~~-~~~~~vflGD~vDrG~~------------------ 77 (294)
..-+|+-..|+||++.. +..++++.... ++..+|-.||++--.+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 45679999999999642 33344443322 23345558998853321
Q ss_pred -cHHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 78 -SVETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 78 -s~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
...++.++..|.. -.+..||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 1346666666653 3578999994
No 129
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=78.73 E-value=5.7 Score=36.19 Aligned_cols=80 Identities=14% Similarity=0.263 Sum_probs=50.3
Q ss_pred CCCCCCCCCEEEEccCCC----CHHHHHHHHHhcC-CCC----CCeEEEecCeecCC----CCc----HHHHHHHHHc-h
Q 022620 28 SEPQPVKSPVTICGDIHG----QFHDLAELFQIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-K 89 (294)
Q Consensus 28 ~~~~~~~~~i~viGDiHG----~~~~l~~~l~~~~-~~~----~~~~vflGD~vDrG----~~s----~evl~~l~~l-~ 89 (294)
.+.-+...+++++||+|= .+++|.++|+... ..+ ...+|++|+++-+. ..+ .+-.+.+..+ .
T Consensus 21 ~~~~~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~lll 100 (291)
T PTZ00235 21 VRKNDKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLI 100 (291)
T ss_pred EecCCCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHH
Confidence 333455678999999994 5667788887663 212 34688999997652 222 2334444432 2
Q ss_pred hhCC-----CcEEEEcCCchhhh
Q 022620 90 VRYP-----QRITILRGNHESRQ 107 (294)
Q Consensus 90 ~~~p-----~~v~~l~GNHE~~~ 107 (294)
.++| .++++|+|-.|-+.
T Consensus 101 s~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 101 SKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HhChHHHhcCeEEEECCCCCCCc
Confidence 2333 48999999999753
No 130
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=76.16 E-value=1.7 Score=39.13 Aligned_cols=69 Identities=28% Similarity=0.340 Sum_probs=44.0
Q ss_pred CCCEEEEccC--CCCHHHHHHHHHhcC---CCCCCeEEEecCee-cCCCCc---------HHHHHHHHHchhhCCCcEEE
Q 022620 34 KSPVTICGDI--HGQFHDLAELFQIGG---KCPDTNYLFMGDYV-DRGYYS---------VETVTLLVALKVRYPQRITI 98 (294)
Q Consensus 34 ~~~i~viGDi--HG~~~~l~~~l~~~~---~~~~~~~vflGD~v-DrG~~s---------~evl~~l~~l~~~~p~~v~~ 98 (294)
+-+++||||- +|.+..-+-.++... ..+-+-++-+||-+ |-|..+ .+-+.---+|++. -+.
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkp----Wy~ 118 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKP----WYS 118 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccc----hhh
Confidence 4579999995 888887766665432 23345677799975 556533 2323222334432 689
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
+.||||..
T Consensus 119 vlGNHDyr 126 (336)
T KOG2679|consen 119 VLGNHDYR 126 (336)
T ss_pred hccCcccc
Confidence 99999975
No 131
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.16 E-value=7.1 Score=36.01 Aligned_cols=54 Identities=30% Similarity=0.492 Sum_probs=36.8
Q ss_pred CCCCCCCCEEEEccCC-CCHHHHHHHHHhcCCCCCCeEEE-ecCeec--CCCCcHHHHHHHHHchh
Q 022620 29 EPQPVKSPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLF-MGDYVD--RGYYSVETVTLLVALKV 90 (294)
Q Consensus 29 ~~~~~~~~i~viGDiH-G~~~~l~~~l~~~~~~~~~~~vf-lGD~vD--rG~~s~evl~~l~~l~~ 90 (294)
+.+|....+.++||.| ||+.++... +..++| .-|+=. -|+...++.++..+|..
T Consensus 51 ~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 51 WSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred cccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 4478889999999999 787776431 233444 666621 26677778887777754
No 132
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=59.00 E-value=39 Score=32.63 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=47.1
Q ss_pred CCEEEEccCCC-CHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhC-CCcEEEEcC
Q 022620 35 SPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 101 (294)
Q Consensus 35 ~~i~viGDiHG-~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~-p~~v~~l~G 101 (294)
..+.+|=|-|+ +.+++.++|+.+...+..+++.+||+..-|+.+.+.-.-+-+.-... .+.++ +-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 45788999666 58888888887754445678899999999999988776665544333 34454 446
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=54.77 E-value=33 Score=24.91 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=42.5
Q ss_pred CEEEEccCCCCHHHHHHHHHhcCC--CCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCC
Q 022620 36 PVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 102 (294)
Q Consensus 36 ~i~viGDiHG~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GN 102 (294)
.+.+|=|---|.+++.++++.+.. +....++++|+.-|.|..+.+....+..+...+...+++...|
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 466777866778888888776642 3445566789888878777776666666655555555554444
No 134
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=52.48 E-value=0.8 Score=43.19 Aligned_cols=94 Identities=5% Similarity=-0.106 Sum_probs=61.6
Q ss_pred CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHhhhCChHHHHHHhC-Ch--hHHHHHHHHhhhC
Q 022620 62 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG-NA--NIWKIFTDLFDYF 138 (294)
Q Consensus 62 ~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~-~~--~~~~~~~~~~~~l 138 (294)
.-..|++++..+++.+.++.+.+-...++.+-.+-..+++||+.....+. +....-. .. .++....+-.+.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~~R~-----~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSFKRR-----YLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcchhhh-----heeecccccCceEEEEeccCcCccc
Confidence 45688999999999999999998888888777777889999965432221 1110000 01 1223333444555
Q ss_pred CcEEEEeceEEEecCCCCCCccc
Q 022620 139 PLTALVESEIFCLHGGLSPSIET 161 (294)
Q Consensus 139 P~~~~i~~~~~~vHgGi~~~~~~ 161 (294)
+...+ ..++++.|++..|....
T Consensus 123 l~k~i-~~~il~~~~l~~Pht~h 144 (476)
T KOG0918|consen 123 LEKTI-DPDILEKTGLACPHTSH 144 (476)
T ss_pred eeeee-chhhHhhcCCcCCcccc
Confidence 55555 44999999999887644
No 135
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=50.76 E-value=38 Score=30.03 Aligned_cols=88 Identities=23% Similarity=0.304 Sum_probs=44.2
Q ss_pred eEEEecCee-cCCC---CcHHHHHHHHHchh-------hCCCcEEEEcCCchhhhhHhhhCChHHHHHHhCChh-HHHHH
Q 022620 64 NYLFMGDYV-DRGY---YSVETVTLLVALKV-------RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN-IWKIF 131 (294)
Q Consensus 64 ~~vflGD~v-DrG~---~s~evl~~l~~l~~-------~~p~~v~~l~GNHE~~~~~~~~~~~~e~~~~~~~~~-~~~~~ 131 (294)
..+||||-. ||-. ..-=+|.+|.++.. +-.++|++|.||||.-.- +.| ..++.... ....-
T Consensus 87 pciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n-gny------~arlanhkls~gDT 159 (318)
T PF13258_consen 87 PCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN-GNY------MARLANHKLSAGDT 159 (318)
T ss_pred cceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC-chH------HHHHhhCCCCccch
Confidence 467888865 3311 11224555554443 123589999999996432 111 11111110 11112
Q ss_pred HHHhhhCCcEEEE-eceEEEecCCCCCC
Q 022620 132 TDLFDYFPLTALV-ESEIFCLHGGLSPS 158 (294)
Q Consensus 132 ~~~~~~lP~~~~i-~~~~~~vHgGi~~~ 158 (294)
-..++.+|.+..- ..+++-.|-||-.+
T Consensus 160 YnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 160 YNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred hhccccccccccCcchhhhhcccCceec
Confidence 3346667765432 23688889998543
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=44.31 E-value=32 Score=34.67 Aligned_cols=43 Identities=23% Similarity=0.336 Sum_probs=35.6
Q ss_pred CeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhhHh
Q 022620 63 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQ 110 (294)
Q Consensus 63 ~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~~~ 110 (294)
+++-++||+.||||.+-.+++.|+..- .|=+-=||||...+..
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMGA 228 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMGA 228 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHHH
Confidence 467789999999999999999999763 5667789999866543
No 137
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=41.48 E-value=54 Score=28.51 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=24.1
Q ss_pred HHhCCCeEEEeeceeeecceEEecCCeEEEEEcC
Q 022620 214 NHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 247 (294)
Q Consensus 214 l~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa 247 (294)
+-..|+++||.||+++..+++.. ++++| ++|-
T Consensus 203 l~~~G~D~IiG~H~Hv~q~~E~~-~~~~I-~YSl 234 (239)
T cd07381 203 LIDAGADLVIGHHPHVLQGIEIY-KGKLI-FYSL 234 (239)
T ss_pred HHHCCCCEEEcCCCCcCCCeEEE-CCEEE-EEcC
Confidence 33469999999999999999874 55554 4654
No 138
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=40.53 E-value=1.3e+02 Score=24.75 Aligned_cols=53 Identities=23% Similarity=0.351 Sum_probs=37.5
Q ss_pred EEEccCCCCHHHHHHHHH-hcCC------------CCCCeEEEecCeecCCCCcHHHHHHHHHchh
Q 022620 38 TICGDIHGQFHDLAELFQ-IGGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVALKV 90 (294)
Q Consensus 38 ~viGDiHG~~~~l~~~l~-~~~~------------~~~~~~vflGD~vDrG~~s~evl~~l~~l~~ 90 (294)
++.+=.+||-..+.+.+. .++. ...-.+||+|=-+|+|.-+-++.++|..|+-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 344446677776655443 2221 2345799999999999999999999999864
No 139
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=39.98 E-value=67 Score=23.23 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=34.8
Q ss_pred CcChhcHHHHHHHHhccCcCCCCCCCCCCEEEEccCCC---CHHHHHHHHHhcCCCCCCeEEEecCeecCCCCc
Q 022620 8 TDTTTDLDEQISQLMQCKPLSEPQPVKSPVTICGDIHG---QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS 78 (294)
Q Consensus 8 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~viGDiHG---~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s 78 (294)
+.++..+.++++.++.... ....++|+|++.- .-.++...+..+-..-.+.+++.||. .|..++
T Consensus 21 ahNp~s~~a~l~~l~~~~~------~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~-~r~~~~ 87 (91)
T PF02875_consen 21 AHNPDSIRALLEALKELYP------KGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN-PRAEDP 87 (91)
T ss_dssp --SHHHHHHHHHHHHHHCT------TSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB-TTTS-H
T ss_pred CCCHHHHHHHHHHHHHhcc------CCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC-CCCCcc
Confidence 4566777777887766322 3456888998655 33333333332222224557788987 444443
No 140
>PLN02965 Probable pheophorbidase
Probab=38.12 E-value=1.1e+02 Score=26.39 Aligned_cols=21 Identities=14% Similarity=-0.017 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCC--eEEEeecee
Q 022620 208 DISEQFNHTNNL--KLIARAHQL 228 (294)
Q Consensus 208 ~~~~~fl~~~~~--~~iIrGH~~ 228 (294)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 346788888764 799999985
No 141
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=37.62 E-value=1.9e+02 Score=27.49 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=19.8
Q ss_pred EEEEccCC-CCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcH
Q 022620 37 VTICGDIH-GQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV 79 (294)
Q Consensus 37 i~viGDiH-G~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ 79 (294)
+.+|=|-+ .+.+++.++|+.+...+..+++++|+.-.-|..+.
T Consensus 298 ~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~ 341 (417)
T TIGR01143 298 LTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSE 341 (417)
T ss_pred cEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHH
Confidence 44555533 25555555555443222233445555544444443
No 142
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=37.53 E-value=1.5e+02 Score=28.18 Aligned_cols=52 Identities=12% Similarity=0.297 Sum_probs=27.4
Q ss_pred cChhcHHHHHHHHhccCcCCCCCCCCCCEEEEccCC--CCHHH-----HHHHHHhcCCCCCCeEEEecCe
Q 022620 9 DTTTDLDEQISQLMQCKPLSEPQPVKSPVTICGDIH--GQFHD-----LAELFQIGGKCPDTNYLFMGDY 71 (294)
Q Consensus 9 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~viGDiH--G~~~~-----l~~~l~~~~~~~~~~~vflGD~ 71 (294)
.++..+.++++.++.. + ..+++|+|+.- |+++. +.+++... ..+.+++.||-
T Consensus 307 ~np~s~~~al~~l~~~-------~-~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~---~~d~vi~~g~~ 365 (417)
T TIGR01143 307 ANPDSMRAALDALARF-------P-GKKILVLGDMAELGEYSEELHAEVGRYANSL---GIDLVFLVGEE 365 (417)
T ss_pred CCHHHHHHHHHHHHhC-------C-CCEEEEEcCchhcChHHHHHHHHHHHHHHHc---CCCEEEEECHH
Confidence 3566666666666531 1 24577777774 56554 33333221 23556666663
No 143
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=35.56 E-value=36 Score=30.45 Aligned_cols=40 Identities=30% Similarity=0.351 Sum_probs=27.2
Q ss_pred eEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 64 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 64 ~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
+++|+||+|.+.- -..+...|.+++.+++..+++. |-|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4789999998743 2356677888888876555554 55543
No 144
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.38 E-value=13 Score=30.65 Aligned_cols=47 Identities=23% Similarity=0.418 Sum_probs=29.2
Q ss_pred cCHHHHHHHHHhCC---------CeEEEeeceeeecceEEecCCeEEEEEcCCCCCCCCCCc
Q 022620 205 FGQDISEQFNHTNN---------LKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNM 257 (294)
Q Consensus 205 fg~~~~~~fl~~~~---------~~~iIrGH~~~~~G~~~~~~~~~iti~Sa~~y~~~~~n~ 257 (294)
.++...+.||.+.| +..=|||+=+++..+.+.. =+.+|+||.+||..
T Consensus 22 ~~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~------~~~~PsYC~~CGkp 77 (158)
T PF10083_consen 22 KNPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGG------HYEAPSYCHNCGKP 77 (158)
T ss_pred cCchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCC------CCCCChhHHhCCCC
Confidence 34456677777765 4556788876643333311 15599999888763
No 145
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=35.04 E-value=84 Score=23.98 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=43.6
Q ss_pred CEEEEccCCCCHHHHHHHHHhcCCCC-----------------CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEE
Q 022620 36 PVTICGDIHGQFHDLAELFQIGGKCP-----------------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 98 (294)
Q Consensus 36 ~i~viGDiHG~~~~l~~~l~~~~~~~-----------------~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 98 (294)
||.||.|=-.....|..+|+.+|... ...+|.+|+.- .....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 57777777777778888887777432 12244556542 5666677777777766788
Q ss_pred EcCCchhh
Q 022620 99 LRGNHESR 106 (294)
Q Consensus 99 l~GNHE~~ 106 (294)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88998876
No 146
>KOG2463 consensus Predicted RNA-binding protein Nob1p involved in 26S proteasome assembly [Posttranslational modification, protein turnover, chaperones]
Probab=34.78 E-value=1.3e+02 Score=28.06 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=47.1
Q ss_pred ccccCHHHHHHHHHhCCCeEEE-eeceeee-cceEEecCCeEEEEEcC--CCCCCCCCCcE---EEEEEeCCCceEEEEE
Q 022620 202 GYTFGQDISEQFNHTNNLKLIA-RAHQLVM-DGFNWAHEQKVVTIFSA--PNYCYRCGNMA---SILEVDDCRSHTFIQF 274 (294)
Q Consensus 202 ~~~fg~~~~~~fl~~~~~~~iI-rGH~~~~-~G~~~~~~~~~iti~Sa--~~y~~~~~n~~---a~l~i~~~~~~~~~~~ 274 (294)
+..-+.-+.++.|-.+|+.++- .|-.... ..|.+.|.+ |++|+|. ..||..|||.. +.+.|++++..+.+..
T Consensus 208 ac~TtDfamQNVlLqm~L~l~~~~G~~Ir~~r~~iLRCh~-Cfsit~~m~k~FCp~CG~~TL~K~aVsv~~dG~~~~h~k 286 (376)
T KOG2463|consen 208 ACLTTDFAMQNVLLQMNLNLLAMSGMKIRSVRSYILRCHG-CFSITSEMPKDFCPSCGHKTLTKCAVSVDEDGNGQTHFK 286 (376)
T ss_pred eeecccHHHHHHHHHhcccccCccchhhhhhhhheeEeee-eeEecCccchhcccccCCCeeeEEEEEecCCCceeEEee
Confidence 4456667888999899988773 2322221 245566644 8889985 47888888875 5567777766555443
No 147
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.82 E-value=1.4e+02 Score=23.60 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCCCCCeEEEecCeecCCCCc-----HHHHHHHHHchhhCCCcEEE---EcCCchhh
Q 022620 47 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITI---LRGNHESR 106 (294)
Q Consensus 47 ~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~---l~GNHE~~ 106 (294)
+++|.+.++..+....-.++|+|+-.|++.+| +...-.+.+--..+|..+.+ --||-+++
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888888766666677999998886544 44444444433356665544 46887765
No 148
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=33.05 E-value=2.7e+02 Score=27.05 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=45.5
Q ss_pred CCEEEEcc-CCCCHHHHHHHHHhcCCC----CCCeEEEecCeecCCCCcHHHHHHHHHchh-hCCCcEEEEcC
Q 022620 35 SPVTICGD-IHGQFHDLAELFQIGGKC----PDTNYLFMGDYVDRGYYSVETVTLLVALKV-RYPQRITILRG 101 (294)
Q Consensus 35 ~~i~viGD-iHG~~~~l~~~l~~~~~~----~~~~~vflGD~vDrG~~s~evl~~l~~l~~-~~p~~v~~l~G 101 (294)
..+.+|=| -=-+.+++.++|+.+... +..+++++||+..+|+.+.+....+-+.-. ...+.++++ |
T Consensus 337 ~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i~V~G~m~elg~~~~~~h~~~~~~~~~~~~d~v~~~-G 408 (479)
T PRK14093 337 GEATLIDESYNANPASMAAALGVLGRAPVGPQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVFCC-G 408 (479)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEEEEECChHHcCcHHHHHHHHHHHHHHHcCCCEEEEE-c
Confidence 45788888 445888999998877643 345677899999999998877655554433 233445555 6
No 149
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=32.70 E-value=2.8e+02 Score=22.87 Aligned_cols=68 Identities=13% Similarity=0.059 Sum_probs=40.9
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
..++++++. |....+...++..|....-..++..|-+..+.-..+++..+.+.-...|.++++ -|.+.
T Consensus 108 g~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~-vgD~~ 175 (198)
T TIGR01428 108 GYRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF-VASNP 175 (198)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE-EeCCH
Confidence 367899987 566777788888886544345555555555544556666555433334555554 45544
No 150
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=32.66 E-value=1.7e+02 Score=31.17 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=44.9
Q ss_pred CCEEEEccCCC-CHHHHHHHHHhcCCCC-CCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 35 SPVTICGDIHG-QFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 35 ~~i~viGDiHG-~~~~l~~~l~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
..+.+|=|-++ +.+++.++|+.+...+ ..+++++|++-+.|+.+.+.-..+-+.-.......+++-|..-.
T Consensus 834 ~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~~ 906 (958)
T PRK11929 834 CGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAAR 906 (958)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCHH
Confidence 45778888764 7889999888775433 45688899999888887665443333322221234555575543
No 151
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=31.44 E-value=52 Score=29.64 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=25.6
Q ss_pred eEEEecCeecCCCCcHH-HHHHHHHchhhCCCcEEEEcCCchhh
Q 022620 64 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYPQRITILRGNHESR 106 (294)
Q Consensus 64 ~~vflGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~l~GNHE~~ 106 (294)
+++|+||++.+ ...+ +-..|.+++.+++..+++. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999954 2233 4466778887776544444 66654
No 152
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=30.69 E-value=24 Score=34.31 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=29.8
Q ss_pred HHHHHHHHhCCCe----EEEeeceeeec--ceE-EecCCeEEEEEcC
Q 022620 208 DISEQFNHTNNLK----LIARAHQLVMD--GFN-WAHEQKVVTIFSA 247 (294)
Q Consensus 208 ~~~~~fl~~~~~~----~iIrGH~~~~~--G~~-~~~~~~~iti~Sa 247 (294)
+...+.|+..|++ .||-||||+.. |-. +.++|+++-|+.+
T Consensus 516 ~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGG 562 (648)
T COG3855 516 EICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGG 562 (648)
T ss_pred HHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCc
Confidence 4556778888776 89999999964 433 3468999999863
No 153
>PF12982 DUF3866: Protein of unknown function (DUF3866); InterPro: IPR024479 This family of proteins is currently functionally uncharacterised.
Probab=28.15 E-value=2e+02 Score=26.58 Aligned_cols=56 Identities=14% Similarity=0.275 Sum_probs=43.5
Q ss_pred CCCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhh
Q 022620 32 PVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVR 91 (294)
Q Consensus 32 ~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~ 91 (294)
..++.-+||+|||+-+..+...++... +..+++++ +.|.|.-++..=..+..||.+
T Consensus 86 sL~G~PVvV~~LHS~Lp~~~a~~k~~~--p~~riaYI--MtDggALP~~fS~~v~~Lk~~ 141 (320)
T PF12982_consen 86 SLDGMPVVVAELHSMLPPIAAGLKALR--PDARIAYI--MTDGGALPLAFSRTVAELKEK 141 (320)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHhC--CCCeEEEE--EeCCcCccHHHHHHHHHHHhC
Confidence 466788999999999999999988765 44555543 457888888888888888765
No 154
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=28.03 E-value=80 Score=28.21 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=33.0
Q ss_pred CCEEEEccCCCCHH--HHHHHHHhcCCCC-CCeEEEecCeecCCCC-cHHHHHHHHHchhhCCCcEEEEcCCchh
Q 022620 35 SPVTICGDIHGQFH--DLAELFQIGGKCP-DTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 105 (294)
Q Consensus 35 ~~i~viGDiHG~~~--~l~~~l~~~~~~~-~~~~vflGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~l~GNHE~ 105 (294)
+|+.++||+-|.-. .+..-|..+...- -+.++.-|.-...|.. +.+....+.+.- -=++-+|||-+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G-----~dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAG-----ADVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhC-----CCEEecccccc
Confidence 46777777777644 3334443332221 2334445555444432 444555555443 22456677764
No 155
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=27.62 E-value=99 Score=27.16 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=24.9
Q ss_pred HHhCCCeEEEeeceeeecceEEecCCeEEEEEcC
Q 022620 214 NHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 247 (294)
Q Consensus 214 l~~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa 247 (294)
+-..|+++||.+|.++..|++.. .+++| ++|-
T Consensus 212 lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSL 243 (250)
T PF09587_consen 212 LIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSL 243 (250)
T ss_pred HHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeC
Confidence 33479999999999999999976 56655 4654
No 156
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=27.40 E-value=86 Score=27.34 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=23.4
Q ss_pred hCCCeEEEeeceeeecceEEecCCeEEEEEcC
Q 022620 216 TNNLKLIARAHQLVMDGFNWAHEQKVVTIFSA 247 (294)
Q Consensus 216 ~~~~~~iIrGH~~~~~G~~~~~~~~~iti~Sa 247 (294)
..|+++||.||+++..+++.. ++++| ++|-
T Consensus 203 ~~G~DvIiG~H~H~~~~~e~~-~~~~I-~Ysl 232 (239)
T smart00854 203 DAGADVVIGHHPHVLQPIEIY-KGKLI-AYSL 232 (239)
T ss_pred HcCCCEEEcCCCCcCCceEEE-CCEEE-EEcc
Confidence 369999999999999998865 46665 4653
No 157
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=26.00 E-value=3.8e+02 Score=22.17 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=39.9
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCC-CCcHHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
..++.|++. +....+..+++..++...-..++.+|-+.++ |++--....+..+.. .|..++ .-|...
T Consensus 101 g~~~~i~S~--~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~-~~~~~~-~igDs~ 168 (213)
T TIGR01449 101 GLRLGLVTN--KPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGV-APQQMV-YVGDSR 168 (213)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCC-ChhHeE-EeCCCH
Confidence 357888885 6777888889988876544456666655554 444334444444443 344433 456654
No 158
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=25.79 E-value=1.8e+02 Score=25.97 Aligned_cols=38 Identities=29% Similarity=0.416 Sum_probs=27.2
Q ss_pred eEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCC
Q 022620 64 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 102 (294)
Q Consensus 64 ~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GN 102 (294)
+++|+||+|.+ +.-.-+-+.|-.+|.++.-.++++-|+
T Consensus 2 riLfiGDvvGk-~Gr~~v~~~Lp~lk~kyk~dfvI~N~E 39 (266)
T COG1692 2 RILFIGDVVGK-PGRKAVKEHLPQLKSKYKIDFVIVNGE 39 (266)
T ss_pred eEEEEecccCc-chHHHHHHHhHHHHHhhcCcEEEEcCc
Confidence 58999999975 223456677888888876567777554
No 159
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=25.73 E-value=1.4e+02 Score=29.93 Aligned_cols=63 Identities=19% Similarity=0.189 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCCCC--CCeEEEecCee--cCCCCcHH----HHHHHHHch-hhCCC-cEEEEcCCchhhhhHh
Q 022620 48 HDLAELFQIGGKCP--DTNYLFMGDYV--DRGYYSVE----TVTLLVALK-VRYPQ-RITILRGNHESRQITQ 110 (294)
Q Consensus 48 ~~l~~~l~~~~~~~--~~~~vflGD~v--DrG~~s~e----vl~~l~~l~-~~~p~-~v~~l~GNHE~~~~~~ 110 (294)
..+..+|+.++... -|-++..||.+ |+++.+.+ ++..+.++. .-+|+ -|+...||||-.-.+.
T Consensus 195 ~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 195 RLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 34556666555332 34566799998 45665543 333333322 23554 5889999999876654
No 160
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=25.61 E-value=2.3e+02 Score=27.94 Aligned_cols=58 Identities=12% Similarity=0.011 Sum_probs=40.0
Q ss_pred CHHHHHHHHHhC-CCeEEEeeceeeecceEEe------cCCeEEEEEcCCCCCCCCCCcEEEEEEeC
Q 022620 206 GQDISEQFNHTN-NLKLIARAHQLVMDGFNWA------HEQKVVTIFSAPNYCYRCGNMASILEVDD 265 (294)
Q Consensus 206 g~~~~~~fl~~~-~~~~iIrGH~~~~~G~~~~------~~~~~iti~Sa~~y~~~~~n~~a~l~i~~ 265 (294)
..+.+.+.++++ +++.++.||.+...=.... -+...+-|.||+.. .+....-+++|-.
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlv--dfPq~~Ri~Ei~~ 431 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHI--DFPQQGRIIELAD 431 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccccc--cCCCCceEEEEEe
Confidence 456777888887 8999999999975422111 12368899998654 3556677888843
No 161
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=25.58 E-value=2.5e+02 Score=22.77 Aligned_cols=70 Identities=19% Similarity=0.296 Sum_probs=50.1
Q ss_pred CCCCEEEEccCCCCHH-HHHHHHHhcCC----CCCCeEEEecCeecCCCCcHHHHHHHHHchhhCC-CcEEEEcCCchhh
Q 022620 33 VKSPVTICGDIHGQFH-DLAELFQIGGK----CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNHESR 106 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~-~l~~~l~~~~~----~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p-~~v~~l~GNHE~~ 106 (294)
..+++++|||--|=-. +++..++..|- .....+|+. .-|.-.+|.-..+..+-.+|+ .+++.|.|.-|.-
T Consensus 4 ~gkKviiiGdRDGiPgpAie~c~~~~gaevvfs~TeCFVct----aagaMDLEnQ~rvk~~aEk~g~enlvVvlG~aeaE 79 (150)
T PF04723_consen 4 EGKKVIIIGDRDGIPGPAIEECVKTAGAEVVFSSTECFVCT----AAGAMDLENQQRVKDLAEKYGAENLVVVLGAAEAE 79 (150)
T ss_pred CCcEEEEEecCCCCCcHHHHHHHHhcCceEEEEeeeEEEec----ccccccHHHHHHHHHHHHhcCCccEEEEecCCChh
Confidence 3568999999999754 67788887752 112223332 447778888888888887764 5899999998864
No 162
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=25.49 E-value=2.3e+02 Score=21.43 Aligned_cols=37 Identities=24% Similarity=0.507 Sum_probs=25.7
Q ss_pred cCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEE
Q 022620 57 GGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 57 ~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 99 (294)
+..-|+.++|++||= |....|+...+.+ .+|++|..+
T Consensus 59 ~~~fP~~kfiLIGDs---gq~DpeiY~~ia~---~~P~~i~ai 95 (100)
T PF09949_consen 59 LRDFPERKFILIGDS---GQHDPEIYAEIAR---RFPGRILAI 95 (100)
T ss_pred HHHCCCCcEEEEeeC---CCcCHHHHHHHHH---HCCCCEEEE
Confidence 334567889999984 6666788776544 688877654
No 163
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=24.71 E-value=3.6e+02 Score=23.10 Aligned_cols=64 Identities=9% Similarity=-0.002 Sum_probs=38.3
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEE
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 99 (294)
..++.+++. +........++..++.+.-..++.+|-+.++.-.-+.+..+.+.....|.+.+++
T Consensus 109 g~~~~i~Tn--~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 109 GKRRILLTN--AHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CCeEEEEeC--cCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 357888887 5666677778877765544456666655555445566665544333345555444
No 164
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=24.13 E-value=1.3e+02 Score=26.47 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=20.8
Q ss_pred HHHHHHHHHhCCCeEEEeeceeeec
Q 022620 207 QDISEQFNHTNNLKLIARAHQLVMD 231 (294)
Q Consensus 207 ~~~~~~fl~~~~~~~iIrGH~~~~~ 231 (294)
.+.+.++++++++++++.||++...
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~ 214 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQ 214 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccce
Confidence 3567788999999999999998744
No 165
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=22.75 E-value=76 Score=24.96 Aligned_cols=55 Identities=20% Similarity=0.297 Sum_probs=35.3
Q ss_pred CCEEEEccCCCCHHHHHHHHHhcC----------------------CCCCCeEEEecCeecCCCCcHHHHHHHHHch
Q 022620 35 SPVTICGDIHGQFHDLAELFQIGG----------------------KCPDTNYLFMGDYVDRGYYSVETVTLLVALK 89 (294)
Q Consensus 35 ~~i~viGDiHG~~~~l~~~l~~~~----------------------~~~~~~~vflGD~vDrG~~s~evl~~l~~l~ 89 (294)
.|-++|||...--....+.++..+ ......++++|-.-.|-++.+..+.++.+.+
T Consensus 36 ~Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~ 112 (123)
T PF04263_consen 36 KPDLIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK 112 (123)
T ss_dssp --SEEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH
T ss_pred CCCEEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Confidence 467888998887777666655443 1234567778888788788888888777766
No 166
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=22.49 E-value=3.1e+02 Score=23.44 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=33.7
Q ss_pred EEEccCCCCHH-HHHHHHHhcCCCCC--CeEEEecCeecCCC-------------CcHHHHHHHHHch
Q 022620 38 TICGDIHGQFH-DLAELFQIGGKCPD--TNYLFMGDYVDRGY-------------YSVETVTLLVALK 89 (294)
Q Consensus 38 ~viGDiHG~~~-~l~~~l~~~~~~~~--~~~vflGD~vDrG~-------------~s~evl~~l~~l~ 89 (294)
.+||-+||+-. +...+|+.+..... .++++.= +|++|+ .+..++.++..++
T Consensus 10 LFvgGlHG~Egk~t~~iL~~l~~~~~~~G~l~i~p-lv~~~kYiSTL~~~YY~s~~Gk~il~lIe~y~ 76 (193)
T PF09892_consen 10 LFVGGLHGDEGKDTSPILKRLKPNDFNNGNLIIIP-LVENSKYISTLDPEYYKSEMGKKILDLIEKYK 76 (193)
T ss_pred EEEeeccCcchhhHHHHHHHhCcccccCceEEEEe-CCCCCCceeecCHHHhcchhhhHHHHHHHHhC
Confidence 56788999876 45678887764433 4555544 777776 3466777777665
No 167
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=22.46 E-value=2.5e+02 Score=25.58 Aligned_cols=57 Identities=21% Similarity=0.270 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCchhhhh
Q 022620 47 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 108 (294)
Q Consensus 47 ~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE~~~~ 108 (294)
-+.|.++|..+|...++++|+-+| ..+-..-.+.+++..+--. +|.+|-|.-..+.-
T Consensus 75 ~e~fa~~~~~~GI~~d~tVVvYdd--~~~~~A~ra~W~l~~~Gh~---~V~iLdGG~~~W~~ 131 (285)
T COG2897 75 PEQFAKLLGELGIRNDDTVVVYDD--GGGFFAARAWWLLRYLGHE---NVRILDGGLPAWKA 131 (285)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECC--CCCeehHHHHHHHHHcCCC---ceEEecCCHHHHHH
Confidence 468889999999998899999998 4556677788777776543 68899888766544
No 168
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=21.84 E-value=4.7e+02 Score=21.78 Aligned_cols=64 Identities=8% Similarity=-0.152 Sum_probs=36.2
Q ss_pred CCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEE
Q 022620 34 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 99 (294)
Q Consensus 34 ~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 99 (294)
..++.+++.-. .......++..+....-..++.++-+.++....+++..+.+.-...|.+++++
T Consensus 110 g~~~~i~Tn~~--~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 110 GYRLGIITDGL--PVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCEEEEEeCCc--hHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 35788888754 33455667777765443456666666665555565555444322334444443
No 169
>PF04056 Ssl1: Ssl1-like; InterPro: IPR007198 Ssl1-like proteins are 40 kDa subunits of the transcription factor II H complex. This domain is often found associated with the C2H2 type Zn-finger (IPR007087 from INTERPRO).; GO: 0008270 zinc ion binding, 0006281 DNA repair, 0006355 regulation of transcription, DNA-dependent
Probab=21.49 E-value=3.4e+02 Score=23.21 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=35.6
Q ss_pred ChhcHHHHHHHHhccCcCCCC---CCCCCCEEEEccCCCCHHHHHHHHHhc
Q 022620 10 TTTDLDEQISQLMQCKPLSEP---QPVKSPVTICGDIHGQFHDLAELFQIG 57 (294)
Q Consensus 10 ~~~~~~~~i~~~~~~~~~~~~---~~~~~~i~viGDiHG~~~~l~~~l~~~ 57 (294)
+...++.+|+.+....+++.. .-.+++.-.++++-|+..+..+.|+..
T Consensus 21 ~~~~l~~Fv~eff~qNPiSqlgii~~~~~~a~~ls~lsgn~~~h~~~L~~~ 71 (193)
T PF04056_consen 21 VLKALEEFVREFFDQNPISQLGIIVMRDGRAERLSELSGNPQEHIEALKKL 71 (193)
T ss_pred HHHHHHHHHHHHHhcCChhheeeeeeecceeEEeeecCCCHHHHHHHHHHh
Confidence 345577888888887777665 234567889999999999888777654
No 170
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=21.33 E-value=2.9e+02 Score=21.84 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCCch
Q 022620 48 HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 104 (294)
Q Consensus 48 ~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GNHE 104 (294)
+.|.+++...|..+.+.+|+-++-=.+|.....++..+..+-. +++.++-|--+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~---~~v~ildGG~~ 134 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGH---PDVAILDGGFF 134 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCC---CCeEEeCCCHH
Confidence 4889999999998888888765411124444445544443332 35777776543
No 171
>PLN02533 probable purple acid phosphatase
Probab=20.35 E-value=96 Score=29.91 Aligned_cols=25 Identities=12% Similarity=0.185 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCeEEEeeceeeec
Q 022620 207 QDISEQFNHTNNLKLIARAHQLVMD 231 (294)
Q Consensus 207 ~~~~~~fl~~~~~~~iIrGH~~~~~ 231 (294)
.+.++.++.++++++++.||.+.-+
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~Ye 335 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYE 335 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceeccc
Confidence 3567888999999999999999644
No 172
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=20.35 E-value=6.4e+02 Score=23.99 Aligned_cols=67 Identities=19% Similarity=0.167 Sum_probs=43.1
Q ss_pred CCCCEEEEccCCCCHHHHHHHHHhcCCCCCCeEEEecCeecCCCCcHHHHHHHHHchhhCCCcEEEEcCC
Q 022620 33 VKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 102 (294)
Q Consensus 33 ~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l~GN 102 (294)
...++.|++ .+....+..+|+..+..+.-..++.+|-+.++.-.-+++....+.....|.+.+++ |+
T Consensus 231 ~GiklaIaS--n~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I-GD 297 (381)
T PLN02575 231 YKIPMALVS--TRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF-GN 297 (381)
T ss_pred CCCeEEEEe--CCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE-cC
Confidence 346788888 46777888899998877666677777777665445555554444333445555544 44
Done!