BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022622
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 275 bits (703), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 197/281 (70%)
Query: 14 IVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLP 73
++ I S++ L ++ +D++P F L+A+++A++MN Y+ +NQ++DVEIDKVNKP LP
Sbjct: 113 VLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLP 172
Query: 74 LASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTK 133
LASG+ S+ TG+AI + S+ S + + S PL + L V F+LGTAYS++LP LRWK
Sbjct: 173 LASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRF 232
Query: 134 PFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIP 193
+A MC++ V ++ Q +F++H Q +V GRP++ TRPLIFA A +S S V++L KDIP
Sbjct: 233 ALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIP 292
Query: 194 DEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTL 253
D +GDK FG +S S LG++ V CV L AY V+++VGA+S F K++S++GH L
Sbjct: 293 DIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVIL 352
Query: 254 AFLLWLRAQTVDLSNNASTYSFYMFIWKLFYAEYLLIHFLR 294
A LW RA++VDLS+ S YMFIWKLFYAEYLL+ FL+
Sbjct: 353 ATTLWARAKSVDLSSKTEITSCYMFIWKLFYAEYLLLPFLK 393
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 264 bits (674), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 195/280 (69%)
Query: 15 VGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPL 74
+ I S+++L +++ +D++P + L+A+++A+ MN Y+ +NQ+ D+EIDKVNKP LPL
Sbjct: 125 LSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPL 184
Query: 75 ASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKP 134
ASG+ S TG+A+ + S + ++ S PL L + F+LGTAYS++LPFLRWK
Sbjct: 185 ASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSA 244
Query: 135 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 194
+A +C++ V ++ Q +FF+H Q +V RP V TRPLIFA A ++ S V++L KDIPD
Sbjct: 245 VVAALCILAVRAVIVQLAFFLHIQTFVFRRPAVFTRPLIFATAFMTFFSVVIALFKDIPD 304
Query: 195 EDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLA 254
+GD+ FG +S S +LG++ V +CV L AY V++++GA+S+ K +++GH+ LA
Sbjct: 305 IEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILA 364
Query: 255 FLLWLRAQTVDLSNNASTYSFYMFIWKLFYAEYLLIHFLR 294
+LW R++++DL++ + SFYMFIWKLFYAEYLLI +R
Sbjct: 365 AILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR 404
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 184/291 (63%), Gaps = 1/291 (0%)
Query: 5 FLFPNSMYQIV-GITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVE 63
F P +M+ IV G T +++ ++ +DL+ +F+ +L+ +++ + ++ + +NQ+ D+E
Sbjct: 120 FCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIE 179
Query: 64 IDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSV 123
IDK+NKPDLPLASG LS + IT + + L A + S PL + + + ++ +AY+V
Sbjct: 180 IDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNV 239
Query: 124 DLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTIS 183
DLP LRWK P L + + + FF+H Q V RP RPLIF AI+S +
Sbjct: 240 DLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRPTTFPRPLIFCTAIVSIYA 299
Query: 184 AVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSFQLVK 243
V++L KDIPD +GD++FG QS+S +LG + V +CV L YGV+++VGA+S K
Sbjct: 300 IVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSK 359
Query: 244 LVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWKLFYAEYLLIHFLR 294
+++++GH+ LA +LW A++VDL++N +SFYMFIWKL AEY LI R
Sbjct: 360 IITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWKLHTAEYFLIPLFR 410
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 217 bits (553), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 178/295 (60%), Gaps = 7/295 (2%)
Query: 4 FFLFPNSMYQIVGIT----SIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQV 59
+F +P Y ++GIT S ++L ++ +D++ + + L+ +L + + Y+ VNQ+
Sbjct: 118 WFSYP---YTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQL 174
Query: 60 ADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGT 119
D+EIDK+NKP LP+ASG S TG+ I+ S S PLI L+V T
Sbjct: 175 YDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWT 234
Query: 120 AYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAII 179
AYS+D+P LRWK PF+A MCM++ + L S+F H Q VL RP+ R L F A +
Sbjct: 235 AYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIGFPRSLGFLVAFM 294
Query: 180 STISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVIVGASSSF 239
+ S ++L KDIPD +GDK+ G S + +LG++ +CV A+GV ++ GAS S
Sbjct: 295 TFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSH 354
Query: 240 QLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWKLFYAEYLLIHFLR 294
K+ + +G++ LA +LW +A++VDLS+ AST SFYMFIWKL YA + L+ +R
Sbjct: 355 FWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMFIWKLLYAGFFLMALIR 409
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 9/261 (3%)
Query: 37 MEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSL 96
++ L LL+ + N Y+ +NQ+ D+ IDKVNKP LP+A+GDLS+ + + + ++ L
Sbjct: 131 LKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGL 190
Query: 97 AIALSLQSPPLIFGLI-VWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFI 155
+ + P I L + LGT YSV P LR K P A + + TV G + F +
Sbjct: 191 -LVVGFNFGPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY- 246
Query: 156 HFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENV 215
H + LG P + P+ F + ++ + V+++ KD+PD +GD++F ++++KLG N+
Sbjct: 247 HATRAALGLPFQWSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNI 306
Query: 216 LRLCVYALFFAYGVSVIVGASSSFQLVK-LVSIIGHSTLAFLLWLRAQTVDLSN--NAST 272
L L Y VS I A Q+ + + I H LA L + ++ +N +
Sbjct: 307 AFLGSGLLLVNY-VSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAI 365
Query: 273 YSFYMFIWKLFYAEYLLIHFL 293
+Y FIW LFYAEYLL FL
Sbjct: 366 SGYYRFIWNLFYAEYLLFPFL 386
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 9/251 (3%)
Query: 42 ALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
L++ + N Y+ +NQ+ D+ IDKVNKP LP+A+GDLS+ T + + + +I ++
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSIVVT 188
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYV 161
P + + LGT YSV P R K P A + + TV G + F + + +
Sbjct: 189 NFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YATRAA 245
Query: 162 LGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVY 221
LG + P+ F ++ + V+++ KD+PD +GD+++ ++++KLG N+ L
Sbjct: 246 LGLTFQWSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAFLGSG 305
Query: 222 ALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLA----FLLWLRAQTVDLSNNASTYSFYM 277
L Y ++ V + V + H+ LA F W+ Q + S Y Y
Sbjct: 306 LLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKDAISQY--YR 363
Query: 278 FIWKLFYAEYL 288
FIW LFYAEY+
Sbjct: 364 FIWNLFYAEYI 374
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 7 FPNSMYQIVGITSIAILPLQSFADLTPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDK 66
FP + G S+ I P + K+ + L +L+ L+ N D +D
Sbjct: 28 FPPIWAYLCGTVSVGIWPGE-------KWPLVLLGMVLAGPLVCGMSQAANNWCDRHVDA 80
Query: 67 VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGT-AYSVDL 125
VN+PD P+ SG + GL I L +++ SLA+ L P FG V+ +L AYSV+
Sbjct: 81 VNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLG--PWGFGATVFGVLAAWAYSVEP 138
Query: 126 PFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPV--VITRPLIFAAAIISTIS 183
L+ ++ + G+ + GL +F G P ++T L++A ++
Sbjct: 139 IRLK-RSGWWGPGLVALCYEGL----PWFTGAAVLSAGAPSFFIVTVALLYAFGAHGIMT 193
Query: 184 AVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFA 226
L D +GD+Q G +S+ LG E +L + A
Sbjct: 194 -----LNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 33 PKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLS 92
P + + AL++A N +N V DVEID++N+PD P+ +GD+S+ A L
Sbjct: 36 PSLLLAVIVALITA--GGN---VINDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALF 90
Query: 93 LTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQF- 151
+ +AIA + L +I +L Y+V R K P L + + + G V+ F
Sbjct: 91 VGGIAIATLTTTLCLAIAIINSVIL-IVYAV-----RLKRTPVLGNVAVAYLAGSVFLFG 144
Query: 152 SFFIHFQKYVLGRPVVITRPLIFAA-AIISTISAVMSLLKDIPDEDGDKQFGFQSISSKL 210
F + V R L AA ++TI+ LLKD D DGD G +++ +
Sbjct: 145 GAFAGIEGLV--------RNLSLAAITFLATIA--RELLKDAEDVDGDAAGGARTLPMIV 194
Query: 211 GKENVLRLCVYALFFAYG 228
G V + ++A A G
Sbjct: 195 G---VRKTGIFAFACACG 209
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 115
+N D EID +NKP P+ SG +S L I + LSL IALS IF + F
Sbjct: 55 INDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSL--FGIALS------IFLGFIEF 106
Query: 116 LLGTAYSVD-LPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 174
L+ TA+S+ + RW + + G +V++ +F + F G +T +I
Sbjct: 107 LIVTAFSLSWYAYARWLKRTGVPGNALVSL-----GVAFTLIFGSLAAGN---LTNKVII 158
Query: 175 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 211
+++ T + + +K + D GD+ G ++I+ ++G
Sbjct: 159 FSSVAFTSNLIREFVKAVEDLPGDRAHGVRTIAVRIG 195
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 31 LTPKYFMEFLKALLSAVLMN-----NYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGL 85
++ ++++E LLSA+++ YV +N V DVEIDK+NKP P+ SG +S+
Sbjct: 28 VSSQWYLELKGILLSALVVGLIAAGGYV--INDVYDVEIDKINKPYRPIPSGKISVNKAK 85
Query: 86 AITLTLSLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVF 145
A+++ L + +A+++ L L+ L+ L Y+ DL K F + + T
Sbjct: 86 ALSIALFIIGIALSILLNIYALVIALVTAIGL-IYYAKDL-----KKTGFYGNLLVATTT 139
Query: 146 GLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQS 205
L + F L R ++ T F ++ + ++K I D +GD ++
Sbjct: 140 ALSIFYGGLAFFSDNWLLRIIIPTLYAFF-------LTLIREIVKGIEDYNGDSLNNVKT 192
Query: 206 ISSKLGKENVLRLC 219
+++ LG R+
Sbjct: 193 LATTLGINKSWRIA 206
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 26/244 (10%)
Query: 32 TPKYFMEFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTL 91
TP +F+ L ++S + YV +N V D+E+DK+NKP+ PL SG +++ ++ L
Sbjct: 35 TPLFFLPLL--VVSLIAAGGYV--INDVYDIEVDKINKPERPLPSGRIAVNIARRFSIVL 90
Query: 92 SLTSLAIALSLQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQF 151
L I++ L P F LI LL + R K L G +V + + +
Sbjct: 91 FAVGLIISIPLGLIPFGFALITIVLL-------YEYARSLKKLGLVGNFIVALTSALSAY 143
Query: 152 SFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 211
+ +LG ++ T + F T+S +K I D +GDK+ G +++ KLG
Sbjct: 144 YGGLA-SGSLLGNFIIPTIYIFFF-----TLS--REFVKGIEDIEGDKRNGVNTLAVKLG 195
Query: 212 KEN---VLRLCVYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSN 268
+++ + ++ + L F + +G F ++ L+ I+ L + + T++ +
Sbjct: 196 EKSTWIIAKIILGILIFTSPLPYFLG----FNVIYLIGILALDVLLVYILILHNTIESAT 251
Query: 269 NAST 272
A +
Sbjct: 252 KARS 255
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 54 GTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTS--LAIALSLQSPPLIFGL 111
T+N D EID++N P+ P+ SG + + L +L L L S L +SL++ ++
Sbjct: 49 NTINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVV--- 105
Query: 112 IVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRP 171
I+ +L Y+ DL K + F+ +C+ + GL + F I + V +
Sbjct: 106 ILCTILMIIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLIT-------KDVNLGFI 153
Query: 172 LIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 220
L F A ++ T+S ++KDI D +GDK+ ++ G + + L V
Sbjct: 154 LGFFAFLM-TLSR--EIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 61/262 (23%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLS-----------MGTGLAITLTLSLTSLAIALSLQS 104
+N D+EIDKVN+PD P+ SG +S G+A ++ LAIAL
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKGAVVWAGILFAAGVAAACFTNIWCLAIAL---- 109
Query: 105 PPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQF-SFFIHFQKYVLG 163
V +L Y+ ++K PFL + + + G ++ F F + + +++
Sbjct: 110 --------VNVVLLIIYAA-----KFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVM 156
Query: 164 RPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG--KENVLR---- 217
P +FA T++ LLKD D +GD+ G +++ ++G K +VL
Sbjct: 157 LP-------LFAITFFGTLA--RELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAVIFV 207
Query: 218 ----LCVYALFFAYGVS--VIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNAS 271
LC + F +GV V++G +F L+ + + T T ++N +
Sbjct: 208 LFAVLCSFVPFLTWGVVYLVLIGVVDAFILLVTLRALKFET---------STELTASNCT 258
Query: 272 TYSFYMFIWKLFYAEYLLIHFL 293
TY Y LF +LL+ L
Sbjct: 259 TYLKYGMFAALFV--FLLMEIL 278
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 28/198 (14%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T+N D EID++N+P+ PL G + T L +L L LA+AL + F L+ +
Sbjct: 55 TINDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAY 114
Query: 115 FLLGTAYSVDLPFLRWKTK--PFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPL 172
+ + WK K PF+ + + + G+ + I K L + + L
Sbjct: 115 --------ITMFLYAWKLKPLPFIGNIAVAALTGVTPLYG-AIAVGKIGLAGTLAVCAFL 165
Query: 173 IFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVI 232
+ A ++KDI D +GD + G +++ LG+ R Y F +GV+ +
Sbjct: 166 VNVA---------REIVKDIEDVEGDLKKGAKTLPIILGR----RKAAYVAAF-FGVATV 211
Query: 233 VGASSSFQLVKLVSIIGH 250
+ +SF VK +G+
Sbjct: 212 I---ASFLPVKAGVGVGY 226
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
+N + D+EIDK+NKP+ PL S +S+ + + L ++ + I+L F +I +
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIISL--------FNMICF 109
Query: 115 FL-LGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 173
+ L + + L ++K + + + + G S FI F +G V IT ++
Sbjct: 110 AIALINSIVLYLYAKKYKRNKIIGNLIVAYLTG-----SIFI-FGGASVGN-VEITL-IL 161
Query: 174 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENV 215
F A+ +T S ++KD D DGDK G S+ K GK ++
Sbjct: 162 FLCALFATWSR--EIIKDYEDLDGDKSEGVISLPIKYGKNSI 201
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 115
+N D+EIDKVNKP P+ SG +S+ + L +L L +T + +A L +P + G+I F
Sbjct: 62 LNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAF-LVNP--LCGIIALF 118
Query: 116 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 175
+ + L K PF + + G + F V G + ++F
Sbjct: 119 ---NSMVLILYAQSLKRTPFFGNASVGYLTGSTFLFG------GAVFGMAGLQALVVLFL 169
Query: 176 AAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
A ++TI+ ++KD+ D GDK+ G +++ +G +
Sbjct: 170 LATLATIA--REIVKDVEDIVGDKKDGARTLPILIGAKK 206
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGL-IVW 114
+N D ID +N+PD P+ SG +S LA +L L L +A+S+ + PL G+ +V
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFL--LGLAVSVFTTPLCMGIALVN 111
Query: 115 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 174
LL Y+ R K+ PF + + S F+ Y ++ P+
Sbjct: 112 ALLLVLYAA-----RLKSTPFFGNAAVAFL-----SASIFLFGGAYAGWHALLDMLPI-- 159
Query: 175 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFAYGVSVI 232
AAI LLKD D +GD+ G +++ ++G + FA S +
Sbjct: 160 -AAITFLAMLARELLKDAEDIEGDRAHGADTLAIRIGVRKTALIAFACTAFAIAASAV 216
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 115
+N D EIDK+N+P+ PL G LS L ++L ++ IA + IF L +
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFIFALGAYL 115
Query: 116 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 175
L+ Y+ L K +PF+ + + T+ G+ + + + G +
Sbjct: 116 LM-YLYARKL-----KPQPFIGNLVVATLTGITPIYGAIAVGKIGLAG----------YL 159
Query: 176 AAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 220
A ++ + KDI D +GDK G +++ G E+ ++ V
Sbjct: 160 ALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 38 EFLKALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLA 97
E + A+L L++ +N V DVEID++NKPD P+ SG +S+ T A +L+ L +
Sbjct: 36 ELILAVLVVALVDAGGNAINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVG 93
Query: 98 IALS 101
+ LS
Sbjct: 94 VILS 97
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLS-----------MGTGLAITLTLSLTSLAIALSLQ 103
+N D E+D VN+PD P+ SG +S G+ + ++ LAIA +L
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINRMCLAIA-ALN 109
Query: 104 SPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLG 163
S ++ L W L GT P + +L G C + F V
Sbjct: 110 S--VLLYLYSWRLKGT------PLIGNVMVSYLVGSCFL--------------FGAAVGQ 147
Query: 164 RPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYAL 223
RP P ++ + + V +LKD+ D +GD G +++ G+ LR+ A
Sbjct: 148 RPA----PAVWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVALRV---AT 200
Query: 224 FFAYGVSVI 232
FA ++V+
Sbjct: 201 VFAIALAVL 209
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T+N D EIDK+N+P+ PL G +MG +A+ ++ L ++ +AL+ I
Sbjct: 55 TINDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMIN------IYA 106
Query: 115 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 174
F+LG V + WK KP L + + V GL + LG + L
Sbjct: 107 FILGVIAYVTMFIYAWKLKP-LPFVGNIVVAGLTGATPLYGAVAVEHLG----LAGYLAI 161
Query: 175 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
A +++ V +KDI D +GD G +++ GK+
Sbjct: 162 CAFLVNVAREV---IKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T+N DVEIDK+N+P+ P+ G ++ + L IAL L +F L +
Sbjct: 55 TINDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY 114
Query: 115 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 174
FL Y+ WK KP L + VTV L + +GR + + L
Sbjct: 115 FLT-FVYA-------WKLKP-LPFIGNVTVALLTAATPI---YGAVGVGR-IDLAGYLAI 161
Query: 175 AAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
A +++ +M KDI D +GDK+ G +++ +GK+
Sbjct: 162 CAFLVNVSREIM---KDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 43 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSL 102
++S + Y+ +N V D+EIDK+NKP+ PL SG + + ++++ L L + +++ L
Sbjct: 45 VVSVIAAGGYI--INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLL 102
Query: 103 QSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVL 162
I L+ L Y+ DL K + + + + L + F+ +
Sbjct: 103 NIYAFIIALLTVLAL-YYYAKDL-----KKQGLVGNLIVALTSALSAFYGGLAFFEGSWV 156
Query: 163 GRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
R ++ T + F + +K I D GD G ++++ ++G E
Sbjct: 157 IRTLIPTLYIFF-------FTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEK 201
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T+N D EIDK+N+P+ PL G +S L ++ L T + +A + +W
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFIN---------IW 105
Query: 115 -FLLGTAYSVDLPFLRWKTK--PFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRP 171
FLL V + WK K PF+ + + ++ G + + + G
Sbjct: 106 DFLLAIVAYVTMFIYAWKLKPMPFIGNVVVASLTGATPLYGAIAVGEIGLAGT------- 158
Query: 172 LIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
L A +++ V +KDI D +GD G +++ +G++
Sbjct: 159 LALCAFLVNVAREV---IKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 45 SAVLMNNYVGT-VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQ 103
SAVL+ G +N D EID VN+PD P+ SG +S L ++ L + IA +
Sbjct: 41 SAVLLITGGGNAINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLIN 100
Query: 104 SPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLG 163
L L+ F+L Y+ R K P + + + G + F
Sbjct: 101 QSCLALALLNSFVL-IIYAA-----RLKGLPVAGNIAISYLTGTTFLFGGLA-------A 147
Query: 164 RPVVITRPLIFAAAIISTISAVMSL----LKDIPDEDGDKQFGFQSISSKLGKENVLRLC 219
P IT A +S +SA+ +L +KDI D GD G +++ + +GK L
Sbjct: 148 SPSSIT-------AFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLA 200
Query: 220 VYALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLR 260
L A +S +V +Q VSI + LAFLL ++
Sbjct: 201 SLVLIVAMLLSYLVPLGIDYQ--AAVSI---ANLAFLLSIK 236
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T+N DVEID+VN+P+ P+ G + L L + LA+A L L+F L
Sbjct: 55 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFAL--- 111
Query: 115 FLLGTAYSVDLPFLRWKTKPF-LAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLI 173
AY++ + WK KP G V + + +GR V + L
Sbjct: 112 ----GAYALTFIY-AWKLKPLPFIGNVAVALLTAATPI-----YGALGVGR-VGLAGYLA 160
Query: 174 FAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
A +++ +M KDI D +GD + G +++ +GK
Sbjct: 161 ICAFLVNVSREIM---KDIEDIEGDMKMGAKTLPIIIGKRR 198
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 42 ALLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
A+++ VL +N D +ID +N+PD P+ G +S A+ +++L ++A+ L+
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRG--ALVYSVALFAVAVVLT 99
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVY-QFSFFIHFQKY 160
L P W + A +++L L T+ F G+ V + Y S F++
Sbjct: 100 LLLP--------WLAIAIA-AINLVALVAYTEVF-KGLPGVGNALVAYLTGSTFLYGGAA 149
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVL 216
V G + ++FA A +T++ ++KD+ D DGD+ G +++ +G+ L
Sbjct: 150 VGGDLAAVV--VLFALAACATMA--REIVKDVEDIDGDRAEGLRTLPIVIGERRSL 201
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 20/162 (12%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
T N D EIDK+N+P+ PL G +S L L +A L +F I +
Sbjct: 55 TANDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRAFVFATIAY 114
Query: 115 FLLGTAYSVDLPFL-RWKTKPF-LAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPL 172
FL FL WK KP L G V I + L + I L
Sbjct: 115 FLT---------FLYGWKLKPLPLVGNITVAALTAATPIYGAIGVGRIGLAGYLAICAFL 165
Query: 173 IFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKEN 214
++ ++KDI D +GDK G +++ +G++
Sbjct: 166 ---------VNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 57 NQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWFL 116
N D +D +N+P P+ SG + GL I + +SL SL + L S +G + L
Sbjct: 72 NDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGS----WGFVA-TL 126
Query: 117 LGTA----YSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITR-P 171
LG A YSV+ L+ +G + GL Y+ +I +L P
Sbjct: 127 LGVAAAWAYSVEPIRLK------RSGWWGPGLVGLAYEGLPWITGAAVLLATADTSPGFP 180
Query: 172 LIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYALFFA 226
++ A + + + + + D +GD++ G +S+ + G E ++ + A
Sbjct: 181 IVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVMGLA 235
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 91/242 (37%), Gaps = 40/242 (16%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
+N DV ID +N+PD P+ SG + + L + TL +A S+ I G+I
Sbjct: 69 AINDYFDVRIDSINRPDRPIPSGRMKLKEALYFSYTLFALGTLLAFSINP---ICGVIAL 125
Query: 115 F-----------LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLG 163
F L GT +L FL G + + GL F F+ +
Sbjct: 126 FNSLVLIFYAKTLKGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLAALAITA 185
Query: 164 RPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCVYAL 223
R +V KDI D +GDK G ++ ++G + L
Sbjct: 186 REIV----------------------KDIEDMEGDKMEGADTLPLRVGAKKASYLAALIG 223
Query: 224 FFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYSFYMFIWKLF 283
F A S + S L L ++ LA L +L A L+ N T S MF +F
Sbjct: 224 FLAVIFSPLPYHLSMLGLRYLYLVL----LADLGFLAAIYQLLARNNPTKSSKMFKIAMF 279
Query: 284 YA 285
+A
Sbjct: 280 FA 281
>sp|A1TJR2|UBIA_ACIAC 4-hydroxybenzoate octaprenyltransferase OS=Acidovorax citrulli
(strain AAC00-1) GN=ubiA PE=3 SV=1
Length = 295
Score = 38.9 bits (89), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDKVNK--PDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
L +LM + VN VAD + D+ K P+ SG +S+ L + L+L S + L+
Sbjct: 59 LGTILMRSAGCCVNDVADRDFDRHVKRTAQRPVTSGAVSVREALGVGAVLALVSFGLVLT 118
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYV 161
+ I W L A ++ PF K F++ V G+ + + F
Sbjct: 119 TNA-----ATIAWSLPALAVTIAYPF----AKRFVS--MPQAVLGVAFSMGIPMAFT--A 165
Query: 162 LGRPVVITRPLIFAAAIISTISAVMSLLKD--IPDEDGDKQFGFQSISSKLGKENVLRLC 219
+G V P++ A ++ + V++ + + D D D + G ++ + LG+ +V +
Sbjct: 166 VGGAV----PMLAAWLVLGNLCWVLAYDTEYAMVDRDDDLKIGMKTSAITLGRHDVPAVM 221
Query: 220 VYALFF 225
+ L F
Sbjct: 222 AFYLAF 227
>sp|B0U042|UBIA_FRAP2 4-hydroxybenzoate octaprenyltransferase OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=ubiA PE=3
SV=1
Length = 285
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK-VNKPDL-PLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M VN +AD++ DK V + + PL SG LS+ L + L L++ + L
Sbjct: 51 IGVVVMRTVGCIVNDIADIDFDKYVERTNTRPLTSGKLSVKNALYLCLALTIIAFICVLF 110
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL +V PF R+ P L + GL + F F+ F
Sbjct: 111 LNLYTILLSFVALFL-----AVLYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 157
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 220
+ + + + + + I TI+ + + D D D + G +S S+ L + V +
Sbjct: 158 -IENQIPLEAWIFYLSTICWTIA--YDTIYALADRDFDLEIGIKS-SAVLFGDKVFKYIF 213
Query: 221 YALFFAYGVSVIVGASSSFQLVKLVSIIGHSTLAFLLWLRAQTVDLSNNASTYS 274
F + + + +G SF ++ + +I + L + + + ++N +S
Sbjct: 214 LFNFISLILLIALGIYLSFNIIFYIGVIISAFLFIRNYFLYKKLGITNCIKAFS 267
>sp|A4IYU3|UBIA_FRATW 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain WY96-3418) GN=ubiA PE=3 SV=1
Length = 289
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A7NA50|UBIA_FRATF 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain FTNF002-00 / FTA) GN=ubiA PE=3
SV=1
Length = 289
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|B2SF41|UBIA_FRATM 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. mediasiatica (strain FSC147) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q2A564|UBIA_FRATH 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain LVS) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q5NGI4|UBIA_FRATT 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain SCHU S4 / Schu 4) GN=ubiA PE=3
SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFST- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q14HY6|UBIA_FRAT1 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. tularensis (strain FSC 198) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFST- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|A0Q4X3|UBIA_FRATN 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. novicida (strain U112) GN=ubiA PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYLATICWTIA--YDTIYALADREFDLEIGIKSSAVLFGNK 206
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 52 YVGTVNQVADVEIDKVNKPDLPLASGDLSM 81
Y +N + D+EID++NKP PL SG + +
Sbjct: 57 YGNVINDIFDIEIDRINKPSRPLPSGKIKL 86
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 75/209 (35%), Gaps = 60/209 (28%)
Query: 43 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 77
L+S + Y T+N D +ID +N+P P+ SG
Sbjct: 132 LMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALL 191
Query: 78 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW---FLLGTAYSVDLPFLRWKTKP 134
D+ G I L+L ++ +PPL W F LG +Y + LP+ W
Sbjct: 192 DIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--W---- 244
Query: 135 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 194
AG + FG +T ++ + S ++++ D
Sbjct: 245 --AGQAL---FG--------------------TLTPDIVVLTCLYSIAGLGIAIVNDFKS 279
Query: 195 EDGDKQFGFQSISSKLGKENVLRLCVYAL 223
+GD+ G QS+ G E +CV A+
Sbjct: 280 IEGDRTLGLQSLPVAFGMETAKWICVGAI 308
>sp|Q0BNI0|UBIA_FRATO 4-hydroxybenzoate octaprenyltransferase OS=Francisella tularensis
subsp. holarctica (strain OSU18) GN=ubiA PE=3 SV=1
Length = 284
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 19/173 (10%)
Query: 44 LSAVLMNNYVGTVNQVADVEIDK--VNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALS 101
+ V+M +N +ADV+ DK PL SG LS+ + + ++L+L + L
Sbjct: 50 IGVVVMRTVGCIINDIADVDFDKHVARTNTRPLTSGQLSIKNAIWLCISLTLVAFICVLF 109
Query: 102 LQSPPLIFGLIVWFLLGTAYSVDLPFL-RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKY 160
L ++ + FL ++ PF R+ P L + GL + F F+ F
Sbjct: 110 LNLYTILLSFVALFL-----AILYPFCKRFFAIPQL-------ILGLAFNFGIFMAFSA- 156
Query: 161 VLGRPVVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKE 213
+ + + + + A I TI+ + + D + D + G +S + G +
Sbjct: 157 -IQNQIPVEAWIFYIATICWTIA--YDTIYALADREFDLETGIKSSAVLFGNK 206
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 60/209 (28%)
Query: 43 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 77
++S + Y T+N D +ID +N+P P+ SG
Sbjct: 141 MMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGIL 200
Query: 78 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW---FLLGTAYSVDLPFLRWKTKP 134
D+ G L+L ++ +PPL W F LG +Y + LP+ W
Sbjct: 201 DVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASY-ISLPW--W---- 253
Query: 135 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 194
AG + FG + P V+ L+++ A + ++++ D
Sbjct: 254 --AGQAL---FGTL---------------TPDVVVLTLLYSIAGLG-----IAIVNDFKS 288
Query: 195 EDGDKQFGFQSISSKLGKENVLRLCVYAL 223
+GD+ G QS+ G E +CV A+
Sbjct: 289 VEGDRALGLQSLPVAFGTETAKWICVGAI 317
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 55 TVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
+N D++ID +N+P+ P+ SG + + L IA S+ S I G I
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINS---ICGSIAL 125
Query: 115 F--LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPL 172
F LL Y+ L K P L + + + G V+ F I + G ++
Sbjct: 126 FNSLLLILYAKTL-----KGTPLLGNLSIGYLTGSVFLFGASI----FGFGGIKALSVLF 176
Query: 173 IFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENVLRLCV 220
+ AA I+ ++KDI D +GD G ++ ++G + L V
Sbjct: 177 LLAALAITA----REIVKDIEDMEGDSLEGADTLPLRIGAKKAGYLAV 220
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 48 LMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPL 107
L+ + +N + D++ID++NKP+ P+ S +S+ + L T L I+L
Sbjct: 49 LVCGFGNALNDIYDLKIDRINKPERPIPSKRISLTNARIFSYLLVFTGLCISL------- 101
Query: 108 IFGLIVWFLLGTAYSVDLPFL--RWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRP 165
F I FL+ S+ L +K + + + + G V+ F +G
Sbjct: 102 -FN-ITCFLMAVLNSIVLQQYASTYKKNKIIGNLIVAYLTGSVFIFG------GIAVGNI 153
Query: 166 VVITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLGKENV 215
V ++F A+ + S ++KD D +GD Q SI K G+ ++
Sbjct: 154 DVTI--MLFLCALFAMWSR--EIIKDYEDIEGDIQEKVISIPIKCGENSI 199
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 77/209 (36%), Gaps = 60/209 (28%)
Query: 43 LLSAVLMNNYVGTVNQVADVEIDKVNKPDLPLASG------------------------- 77
++S + Y T+N D +ID +N+P P+ SG
Sbjct: 130 IMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALL 189
Query: 78 DLSMGTGLAITLTLSLTSLAIALSLQSPPLIF---GLIVWFLLGTAYSVDLPFLRWKTKP 134
D+ G I L++ ++ +PPL G I F LG +Y + LP+ W
Sbjct: 190 DVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASY-IGLPW--W---- 242
Query: 135 FLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFAAAIISTISAVMSLLKDIPD 194
AG + FG +T ++ ++ S ++++ D
Sbjct: 243 --AGQAL---FG--------------------TLTPDIVVLTSLYSIAGLGIAIVNDFKS 277
Query: 195 EDGDKQFGFQSISSKLGKENVLRLCVYAL 223
+GD+ G QS+ G E +CV A+
Sbjct: 278 VEGDRALGLQSLPVAFGMETAKWICVGAI 306
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 19/153 (12%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVWF 115
+N D EID +N+PD P+ SG + G L + L L IA+ PL
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPL-------- 105
Query: 116 LLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIFA 175
++ + W FL ++ + Y + F + G T+ +I
Sbjct: 106 ---AGIAMGNSVILWLYASFLKKTPLIGNISVSYLAASIFLFGGAIQG-----TQGIISV 157
Query: 176 AAIISTISAVM---SLLKDIPDEDGDKQFGFQS 205
I VM L+KD D GD + G ++
Sbjct: 158 FPIAGATWGVMLARELIKDAEDMPGDNEHGART 190
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIALSLQSPPLIFGLIVW- 114
+N D+E D V KP P+ SG +S G L L IAL ++FG V
Sbjct: 65 INDYYDIETDMVAKPWRPIVSGRVSPGAARFYAYMLFTIGLIIALVTCPNFIVFGFAVLN 124
Query: 115 FLLGTAYSVDLPFLRWKTKPFLAGMCMVT-------VFGLVYQFSFFIHFQKYVLGRPVV 167
LL YS RW + L G ++ VFG +Y S I K VL P V
Sbjct: 125 ALLVHEYS------RWIKRTGLPGNIVIAFNSASTIVFGALYA-SCMIK-GKVVL--PSV 174
Query: 168 ITRPLIFAAAIISTISAVMSLLKDIPDEDGDKQFGFQSISSKLG 211
P+++A ++ +K I D GD G +++ + G
Sbjct: 175 ALIPVLYAFLLVLG----REFVKGIEDVKGDAIAGIGTLAVRFG 214
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 18/148 (12%)
Query: 56 VNQVADVEIDKVNKPDLPLASGDLSMG-TGLAITLTLSLTSLAIALSLQSPPLIFGLIVW 114
+N D EID +N+P+ P+ SG +S G G+ + +L SL + L P GL+V
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASL-MGFYLGLLP---GLVV- 105
Query: 115 FLLGTAYSVDLPFLRWKTKPFLAGMCMVTVFGLVYQFSFFIHFQKYVLGRPVVITRPLIF 174
+ S+ + + W+ K C+V + + F VLG R I
Sbjct: 106 ----VSSSLLMVYYAWRLKK----RCLVGNITISFLTGLSFVFGGIVLGE----VRASIL 153
Query: 175 AAAIISTISAVMSLLKDIPDEDGDKQFG 202
++ ++KD+ D +GD+ G
Sbjct: 154 LGFYAFLMTMAREIVKDMEDVEGDRAEG 181
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 48 LMNNYVGTVNQVADVEIDKVNKPDLPLASGDLSMGTGLAITLTLSLTSLAIAL 100
L+ + +N + D++IDK+NKP P+ S +S+G + L + L I++
Sbjct: 49 LVCGFGNALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIISM 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.142 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,409,690
Number of Sequences: 539616
Number of extensions: 3669542
Number of successful extensions: 11458
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 11359
Number of HSP's gapped (non-prelim): 126
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)