BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022625
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3
SV=1
Length = 319
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLK 158
++L+ G +G+ V+L + K +++ LV++ R N ++ +G E + GD S + +
Sbjct: 2 SLLIIGGTGTLGRQVVLQALTKGYQVRCLVRNFRKANFLKEWGA--ELIYGDLSRPETIP 59
Query: 159 TALRGVRSIICPSEGFISNAGSLKGVQH-----VILLSQLS-----VYRGSGGIQALMKG 208
L+G+ ++I S S+ +LK V +I +Q + V+ S ++ +
Sbjct: 60 PCLQGITAVIDTSTSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFCSSQNVEQFLNI 119
Query: 209 NARKLAEQDESMLMASGIPYTIIRTG-------------VLQNTPGGKQGFQFEEGCAAN 255
++ E+ L S IPYT+ R VL+N P E C +
Sbjct: 120 PLMEMKFGIETKLQQSNIPYTVFRLAGFYQGLIEQYAIPVLENLPILVTN---ENTCVS- 175
Query: 256 GSLSKEDAAFICVEALESIPQT-----------GLIFEVCEISNLCEQL 293
+ +D A C+ +L+ +P+T G + EI NLCEQL
Sbjct: 176 -YMDTQDIAKFCLRSLQ-LPETKNRTFVLGGQKGWV--SSEIINLCEQL 220
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+A GV+ ++L+ + + + ++ N + E L SGIPYTIIR G L
Sbjct: 190 DAAKAAGVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGL 249
Query: 237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALE 272
Q+ GG + G E ++++ D A +CV+AL+
Sbjct: 250 QDKDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQ 289
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
GN=At5g02240 PE=1 SV=1
Length = 253
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+A + GV+H++++ + + L GN + E L SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEAL 271
+ GG + G E ++ + D A +C++AL
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQAL 216
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis
thaliana GN=At2g34460 PE=1 SV=1
Length = 280
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 86/225 (38%), Gaps = 38/225 (16%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT----------------YVE 145
V V G+ ++ L+ + +KA V+D A SF +
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEGPDKLA 108
Query: 146 SMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSL--------KGVQHVILLSQLSVYR 197
+ GD S T R I P + + N G++ +GV+ +L+S + V
Sbjct: 109 EVIGDDSQAVICATGFRPGFDIFTPWK--VDNFGTVNLVDACRKQGVEKFVLVSSILVNG 166
Query: 198 GSGGIQAL--------MKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFE 249
+ G Q L + G Q E + SGI YTI+R G L+N P
Sbjct: 167 AAMG-QILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEP 225
Query: 250 EGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCEISNLCEQLK 294
E GS+S++ A + VEAL Q F+V EI E K
Sbjct: 226 EDTLYEGSISRDLVAEVAVEAL---LQEESSFKVVEIVARAEAPK 267
>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2
Length = 286
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+LV G IG V+ L + KALV+D A E V++ AGD + L AL
Sbjct: 2 ILVVGGTGTIGSEVVRLLQEAKLPFKALVRDAAKARELNARGVQTAAGDLREPRTLPAAL 61
Query: 162 RGVRSI-----ICPSE----GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--- 209
GV + + P + + A GV+H ++ S GI A
Sbjct: 62 GGVDKVFVVTPLVPDQVQMRAALITAAKTAGVKHFVM---------STGIGAAPDSPVQI 112
Query: 210 ARKLAEQDESMLMASGIPYTIIRTG-VLQN 238
R L E ++ + SG+ +T ++ G +QN
Sbjct: 113 GRWLGE-NQQQVQESGMAWTFVQPGFFMQN 141
>sp|P39315|QOR2_ECOLI Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB
PE=1 SV=1
Length = 286
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 34/152 (22%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFL 157
+ +T +G VI SL+ V ++I A+V++ K A+ + G V D ++ L
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ--ADYGDEAAL 59
Query: 158 KTALRGVRSII----------CPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207
+AL+GV ++ P + NA GV+ + S L+
Sbjct: 60 TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTS-------------LLH 106
Query: 208 GNARKLAEQDES-----MLMASGIPYTIIRTG 234
+ L DE ML SGI YT++R G
Sbjct: 107 ADTSPLGLADEHIETEKMLADSGIVYTLLRNG 138
>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain
168) GN=yhfK PE=2 SV=1
Length = 214
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 218 ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQT 277
+ +L ASG+ YTIIR G L+N PG G G +S++D A + +L+
Sbjct: 137 DKILEASGLTYTIIRPGGLRNEPG--TGTVSAAKDLERGFISRDDVAKTVIASLDEKNTE 194
Query: 278 GLIFEVCE 285
F++ E
Sbjct: 195 NRAFDLTE 202
>sp|C0ZZB6|AROB_RHOE4 3-dehydroquinate synthase OS=Rhodococcus erythropolis (strain PR4 /
NBRC 100887) GN=aroB PE=3 SV=1
Length = 369
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 226 IPYTIIRTGVLQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVCE 285
+P T++ ++ GGK G E G GS + A FI + LE++P ++ + E
Sbjct: 126 VPTTLL--AMVDAAVGGKTGINTEAGKNLVGSFHEPGAVFIDLATLETVPHNEIVAGMAE 183
Query: 286 I 286
+
Sbjct: 184 V 184
>sp|Q7ZXX2|KIF19_XENLA Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1
Length = 997
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 164 VRSIICPSEGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215
+R ++ PS G++ KGV V ++++S +Q LMKGN ++ E
Sbjct: 158 IRDLLNPSLGYLDLREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQRTQE 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,932,241
Number of Sequences: 539616
Number of extensions: 4413519
Number of successful extensions: 18216
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 18157
Number of HSP's gapped (non-prelim): 64
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)