Query 022631
Match_columns 294
No_of_seqs 235 out of 1744
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 08:35:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tqr_A Phosphoribosylglycinami 100.0 4.5E-52 1.5E-56 372.6 24.7 205 79-290 4-208 (215)
2 4ds3_A Phosphoribosylglycinami 100.0 1.4E-51 4.7E-56 368.0 22.6 191 79-274 6-196 (209)
3 1meo_A Phosophoribosylglycinam 100.0 2.6E-51 8.9E-56 366.3 24.1 205 81-290 1-205 (209)
4 3auf_A Glycinamide ribonucleot 100.0 3.2E-51 1.1E-55 370.4 23.9 214 74-292 16-229 (229)
5 3kcq_A Phosphoribosylglycinami 100.0 9.6E-51 3.3E-55 364.0 26.7 199 79-287 7-205 (215)
6 1jkx_A GART;, phosphoribosylgl 100.0 4.4E-51 1.5E-55 365.5 24.0 202 81-288 1-202 (212)
7 3p9x_A Phosphoribosylglycinami 100.0 1.8E-51 6.3E-56 367.6 21.5 191 80-275 2-192 (211)
8 3da8_A Probable 5'-phosphoribo 100.0 5E-51 1.7E-55 365.8 22.3 204 76-287 8-211 (215)
9 3nrb_A Formyltetrahydrofolate 100.0 1.8E-50 6E-55 376.4 21.2 211 67-284 75-285 (287)
10 2ywr_A Phosphoribosylglycinami 100.0 1.5E-49 5.3E-54 356.2 23.3 198 80-282 1-198 (216)
11 3obi_A Formyltetrahydrofolate 100.0 8.4E-50 2.9E-54 372.0 22.4 210 67-284 76-286 (288)
12 3o1l_A Formyltetrahydrofolate 100.0 4.1E-49 1.4E-53 369.4 26.0 209 67-283 92-300 (302)
13 3n0v_A Formyltetrahydrofolate 100.0 2.8E-49 9.5E-54 368.2 24.6 208 67-282 77-284 (286)
14 3av3_A Phosphoribosylglycinami 100.0 1.5E-49 5E-54 355.5 21.9 194 80-278 3-196 (212)
15 3lou_A Formyltetrahydrofolate 100.0 2.4E-49 8.2E-54 369.5 24.1 209 67-283 82-290 (292)
16 1fmt_A Methionyl-tRNA FMet for 100.0 2.7E-41 9.2E-46 318.1 23.7 183 79-279 2-196 (314)
17 2bln_A Protein YFBG; transfera 100.0 1.9E-41 6.4E-46 318.0 21.6 181 81-279 1-190 (305)
18 2bw0_A 10-FTHFDH, 10-formyltet 100.0 7.7E-40 2.6E-44 310.0 22.6 188 79-278 21-214 (329)
19 3q0i_A Methionyl-tRNA formyltr 100.0 3E-39 1E-43 304.7 24.9 184 80-279 7-200 (318)
20 3rfo_A Methionyl-tRNA formyltr 100.0 3.7E-39 1.3E-43 303.9 25.5 183 79-279 3-197 (317)
21 3tqq_A Methionyl-tRNA formyltr 100.0 2.7E-39 9.1E-44 304.6 24.1 161 107-279 25-195 (314)
22 1z7e_A Protein aRNA; rossmann 100.0 6.9E-39 2.4E-43 325.5 22.0 181 81-279 1-190 (660)
23 1zgh_A Methionyl-tRNA formyltr 100.0 4.7E-30 1.6E-34 235.6 12.9 118 148-278 66-184 (260)
24 3rjz_A N-type ATP pyrophosphat 92.4 0.28 9.5E-06 43.9 7.0 86 81-174 5-102 (237)
25 4fb5_A Probable oxidoreductase 87.7 1.1 3.9E-05 40.9 7.1 47 107-167 56-102 (393)
26 3nkl_A UDP-D-quinovosamine 4-d 87.1 1.1 3.6E-05 35.3 5.8 69 80-166 4-72 (141)
27 3s2u_A UDP-N-acetylglucosamine 87.0 1.4 4.8E-05 40.6 7.4 86 79-168 1-101 (365)
28 4had_A Probable oxidoreductase 85.7 1.1 3.6E-05 41.0 5.7 73 79-168 22-95 (350)
29 3keo_A Redox-sensing transcrip 85.2 1.3 4.4E-05 38.8 5.7 99 79-194 83-186 (212)
30 3dty_A Oxidoreductase, GFO/IDH 84.0 1.1 3.7E-05 42.0 5.1 54 78-132 10-64 (398)
31 1zh8_A Oxidoreductase; TM0312, 82.9 2.2 7.6E-05 39.0 6.6 84 70-168 8-91 (340)
32 3v5n_A Oxidoreductase; structu 81.3 1.2 4E-05 42.3 4.1 53 79-132 36-89 (417)
33 3moi_A Probable dehydrogenase; 81.2 1.7 5.7E-05 40.6 5.1 73 79-168 1-73 (387)
34 3mz0_A Inositol 2-dehydrogenas 81.0 4.2 0.00014 37.0 7.7 74 80-168 2-75 (344)
35 1nvm_B Acetaldehyde dehydrogen 78.8 6.8 0.00023 35.8 8.3 73 80-167 4-79 (312)
36 3otg_A CALG1; calicheamicin, T 78.7 7.1 0.00024 35.4 8.5 57 76-138 16-75 (412)
37 3ohs_X Trans-1,2-dihydrobenzen 78.6 3.5 0.00012 37.4 6.3 73 80-168 2-75 (334)
38 3q2i_A Dehydrogenase; rossmann 78.5 3.7 0.00013 37.5 6.5 73 79-168 12-84 (354)
39 3a06_A 1-deoxy-D-xylulose 5-ph 77.4 8.7 0.0003 36.5 8.7 85 80-166 3-92 (376)
40 4gmf_A Yersiniabactin biosynth 76.2 1.3 4.6E-05 41.7 2.8 53 78-134 5-57 (372)
41 4h3v_A Oxidoreductase domain p 75.6 2.3 8E-05 38.7 4.2 46 108-167 38-83 (390)
42 3ec7_A Putative dehydrogenase; 75.1 9.8 0.00033 34.9 8.4 75 79-168 22-96 (357)
43 3evn_A Oxidoreductase, GFO/IDH 74.6 4.5 0.00015 36.6 5.8 73 79-168 4-76 (329)
44 3cea_A MYO-inositol 2-dehydrog 74.3 8.2 0.00028 34.8 7.6 76 78-169 6-81 (346)
45 4ep1_A Otcase, ornithine carba 72.9 14 0.00049 34.5 8.9 38 159-198 247-300 (340)
46 3euw_A MYO-inositol dehydrogen 72.8 6.5 0.00022 35.6 6.5 71 80-168 4-74 (344)
47 3uuw_A Putative oxidoreductase 72.4 4.5 0.00015 36.1 5.2 73 78-170 4-77 (308)
48 3ezy_A Dehydrogenase; structur 72.0 6.7 0.00023 35.6 6.4 73 80-169 2-74 (344)
49 2i6u_A Otcase, ornithine carba 71.9 11 0.00038 34.6 7.8 38 159-198 217-271 (307)
50 3gd5_A Otcase, ornithine carba 71.3 17 0.00057 33.8 8.9 26 171-198 254-279 (323)
51 3okp_A GDP-mannose-dependent a 69.8 20 0.00069 31.7 9.0 109 79-191 3-121 (394)
52 3i23_A Oxidoreductase, GFO/IDH 69.7 9.8 0.00034 34.6 7.0 69 79-167 1-73 (349)
53 3rc1_A Sugar 3-ketoreductase; 68.9 6.1 0.00021 36.2 5.4 72 79-168 26-98 (350)
54 3ot5_A UDP-N-acetylglucosamine 68.5 19 0.00066 33.5 8.9 112 78-191 25-148 (403)
55 1pvv_A Otcase, ornithine carba 68.4 12 0.00042 34.5 7.3 38 159-198 223-277 (315)
56 2p2s_A Putative oxidoreductase 68.3 12 0.00042 33.7 7.2 71 79-167 3-74 (336)
57 1vlv_A Otcase, ornithine carba 67.5 13 0.00044 34.5 7.3 38 159-198 236-291 (325)
58 3f4l_A Putative oxidoreductase 67.2 8.4 0.00029 35.0 5.9 52 80-134 2-54 (345)
59 4hkt_A Inositol 2-dehydrogenas 66.8 12 0.0004 33.7 6.8 71 79-168 2-72 (331)
60 3oti_A CALG3; calicheamicin, T 65.9 22 0.00075 32.2 8.5 55 77-138 17-74 (398)
61 3u3x_A Oxidoreductase; structu 65.7 9.7 0.00033 35.0 6.1 72 79-167 25-96 (361)
62 3rsc_A CALG2; TDP, enediyne, s 65.6 28 0.00095 31.5 9.2 108 78-191 18-150 (415)
63 3hbm_A UDP-sugar hydrolase; PS 65.2 21 0.00072 32.0 8.1 75 89-180 14-88 (282)
64 3e9m_A Oxidoreductase, GFO/IDH 65.2 12 0.00041 33.8 6.5 75 79-170 4-78 (330)
65 3ip3_A Oxidoreductase, putativ 64.6 11 0.00037 34.2 6.1 72 79-167 1-75 (337)
66 2dt5_A AT-rich DNA-binding pro 64.0 7.7 0.00026 33.6 4.7 70 79-167 79-148 (211)
67 3k32_A Uncharacterized protein 63.8 9.3 0.00032 32.4 5.2 58 78-138 4-65 (203)
68 1f0k_A MURG, UDP-N-acetylgluco 63.8 27 0.00091 30.8 8.5 84 81-168 7-105 (364)
69 3nbm_A PTS system, lactose-spe 62.4 22 0.00076 27.4 6.7 64 78-141 4-89 (108)
70 3fwz_A Inner membrane protein 62.2 37 0.0013 26.3 8.2 72 80-166 7-78 (140)
71 3bl5_A Queuosine biosynthesis 60.8 15 0.00051 30.7 5.9 56 80-138 3-64 (219)
72 3grf_A Ornithine carbamoyltran 58.6 44 0.0015 30.9 9.1 100 79-198 160-289 (328)
73 3beo_A UDP-N-acetylglucosamine 58.6 43 0.0015 29.5 9.0 108 80-191 8-129 (375)
74 2ho3_A Oxidoreductase, GFO/IDH 58.5 22 0.00076 31.7 7.0 73 80-170 1-73 (325)
75 4ea9_A Perosamine N-acetyltran 57.5 41 0.0014 28.2 8.2 51 76-135 8-58 (220)
76 2gek_A Phosphatidylinositol ma 56.8 11 0.00037 33.8 4.6 112 77-191 17-141 (406)
77 3e18_A Oxidoreductase; dehydro 56.6 20 0.00067 32.8 6.4 71 79-168 4-74 (359)
78 4gqa_A NAD binding oxidoreduct 56.4 17 0.00058 33.8 6.0 47 107-167 58-104 (412)
79 3llv_A Exopolyphosphatase-rela 56.4 39 0.0013 25.9 7.3 72 80-166 6-77 (141)
80 1ydw_A AX110P-like protein; st 56.2 26 0.00089 31.8 7.2 76 79-170 5-82 (362)
81 1jl3_A Arsenate reductase; alp 56.2 20 0.00068 28.5 5.6 74 80-166 3-81 (139)
82 2pjk_A 178AA long hypothetical 55.7 3.7 0.00013 34.6 1.1 81 70-168 5-90 (178)
83 1v4v_A UDP-N-acetylglucosamine 55.2 47 0.0016 29.4 8.6 110 80-191 5-125 (376)
84 3m2t_A Probable dehydrogenase; 54.7 21 0.00071 32.7 6.2 71 80-167 5-76 (359)
85 3ouz_A Biotin carboxylase; str 54.2 26 0.00089 32.8 7.0 81 76-164 2-83 (446)
86 2nvw_A Galactose/lactose metab 53.9 26 0.00088 33.7 7.0 53 79-132 38-92 (479)
87 1vgv_A UDP-N-acetylglucosamine 53.1 58 0.002 28.8 8.9 108 81-191 1-120 (384)
88 3o9z_A Lipopolysaccaride biosy 52.9 62 0.0021 28.9 9.0 74 80-168 3-81 (312)
89 3tpf_A Otcase, ornithine carba 52.3 61 0.0021 29.6 8.9 97 80-197 146-267 (307)
90 1ni5_A Putative cell cycle pro 52.0 33 0.0011 32.6 7.3 59 80-138 13-81 (433)
91 1p8a_A Protein tyrosine phosph 50.6 30 0.001 27.7 5.9 79 79-168 3-88 (146)
92 1h6d_A Precursor form of gluco 50.2 16 0.00056 34.5 4.9 76 78-169 81-160 (433)
93 3btv_A Galactose/lactose metab 50.1 20 0.00069 33.9 5.5 49 80-132 20-73 (438)
94 3db2_A Putative NADPH-dependen 50.1 25 0.00085 31.9 5.9 71 80-168 5-75 (354)
95 2pg3_A Queuosine biosynthesis 49.7 23 0.00078 30.2 5.3 55 80-137 2-63 (232)
96 1q0q_A 1-deoxy-D-xylulose 5-ph 49.6 35 0.0012 32.6 6.9 60 77-137 6-65 (406)
97 2der_A TRNA-specific 2-thiouri 49.2 20 0.0007 33.6 5.3 59 77-138 14-86 (380)
98 2glx_A 1,5-anhydro-D-fructose 49.0 22 0.00076 31.6 5.4 70 82-169 2-72 (332)
99 3fhl_A Putative oxidoreductase 49.0 17 0.00057 33.3 4.6 37 79-118 4-41 (362)
100 2iya_A OLEI, oleandomycin glyc 48.8 70 0.0024 29.0 8.9 110 75-191 7-140 (424)
101 1jf8_A Arsenate reductase; ptp 48.6 35 0.0012 26.8 5.9 75 80-167 3-82 (131)
102 3dzc_A UDP-N-acetylglucosamine 48.4 93 0.0032 28.6 9.7 111 78-191 23-145 (396)
103 4fzr_A SSFS6; structural genom 48.4 51 0.0017 29.7 7.8 53 79-137 14-69 (398)
104 1vl2_A Argininosuccinate synth 47.8 21 0.00071 34.3 5.1 57 77-138 11-74 (421)
105 2l17_A Synarsc, arsenate reduc 47.4 12 0.00042 29.7 3.0 76 80-168 4-85 (134)
106 2wmy_A WZB, putative acid phos 46.7 63 0.0021 25.9 7.3 76 80-169 8-91 (150)
107 3gdo_A Uncharacterized oxidore 46.0 25 0.00084 32.1 5.2 35 79-116 4-39 (358)
108 3ia7_A CALG4; glycosysltransfe 45.3 1.1E+02 0.0038 27.0 9.5 106 80-191 4-134 (402)
109 3oqb_A Oxidoreductase; structu 44.3 24 0.00083 32.3 4.9 43 113-168 50-92 (383)
110 1r0k_A 1-deoxy-D-xylulose 5-ph 43.6 69 0.0023 30.3 8.0 57 80-137 4-60 (388)
111 2fek_A Low molecular weight pr 43.2 60 0.0021 26.8 6.7 76 80-169 22-105 (167)
112 3s81_A Putative aspartate race 43.0 33 0.0011 30.5 5.5 38 150-187 90-128 (268)
113 2hma_A Probable tRNA (5-methyl 42.7 27 0.00093 32.6 5.0 56 80-138 9-78 (376)
114 3i6i_A Putative leucoanthocyan 42.0 66 0.0023 28.5 7.4 77 81-168 11-92 (346)
115 3e82_A Putative oxidoreductase 41.2 74 0.0025 28.9 7.7 35 79-116 6-41 (364)
116 2y1e_A 1-deoxy-D-xylulose 5-ph 41.0 39 0.0013 32.2 5.7 86 80-166 21-112 (398)
117 2q7x_A UPF0052 protein SP_1565 40.8 34 0.0012 31.7 5.3 38 79-120 3-40 (326)
118 3loq_A Universal stress protei 40.8 1.2E+02 0.0042 25.9 8.8 107 79-190 169-291 (294)
119 1lss_A TRK system potassium up 40.7 1.1E+02 0.0036 22.7 7.5 73 80-166 4-76 (140)
120 1id1_A Putative potassium chan 40.6 1E+02 0.0035 23.9 7.6 76 80-167 3-79 (153)
121 2axq_A Saccharopine dehydrogen 40.5 64 0.0022 31.0 7.4 77 77-167 20-96 (467)
122 1duv_G Octase-1, ornithine tra 40.3 68 0.0023 29.7 7.3 56 124-195 203-277 (333)
123 1tlt_A Putative oxidoreductase 40.1 1.1E+02 0.0038 26.9 8.6 49 80-132 5-54 (319)
124 1k92_A Argininosuccinate synth 40.1 37 0.0013 32.9 5.6 56 79-137 9-71 (455)
125 1xea_A Oxidoreductase, GFO/IDH 39.8 39 0.0013 30.1 5.5 49 80-133 2-51 (323)
126 1tq8_A Hypothetical protein RV 39.6 1.1E+02 0.0036 24.1 7.6 88 77-170 14-130 (163)
127 3au8_A 1-deoxy-D-xylulose 5-ph 39.4 31 0.0011 33.7 4.9 77 49-137 57-136 (488)
128 2iuy_A Avigt4, glycosyltransfe 38.9 74 0.0025 27.7 7.1 42 149-192 74-115 (342)
129 3rh0_A Arsenate reductase; oxi 38.2 56 0.0019 26.5 5.7 78 77-167 17-100 (148)
130 2vsy_A XCC0866; transferase, g 37.7 1.3E+02 0.0046 28.2 9.2 81 77-167 202-290 (568)
131 3tsa_A SPNG, NDP-rhamnosyltran 37.6 83 0.0029 28.0 7.4 50 81-136 2-54 (391)
132 4ina_A Saccharopine dehydrogen 37.3 41 0.0014 31.4 5.4 75 81-166 2-83 (405)
133 3l4b_C TRKA K+ channel protien 37.3 87 0.003 25.9 7.0 71 82-166 2-72 (218)
134 4ew6_A D-galactose-1-dehydroge 37.1 1.1E+02 0.0038 27.4 8.1 36 79-117 24-60 (330)
135 1dxh_A Ornithine carbamoyltran 36.9 66 0.0022 29.8 6.6 35 159-195 224-277 (335)
136 1wy5_A TILS, hypothetical UPF0 36.7 51 0.0018 29.6 5.8 90 80-169 24-135 (317)
137 2w37_A Ornithine carbamoyltran 36.7 72 0.0025 29.9 6.9 35 159-195 245-298 (359)
138 3jvi_A Protein tyrosine phosph 36.2 33 0.0011 28.0 4.0 79 79-169 3-93 (161)
139 2cwd_A Low molecular weight ph 36.2 37 0.0013 27.7 4.3 78 79-168 3-92 (161)
140 2wja_A Putative acid phosphata 36.0 63 0.0022 26.7 5.8 76 80-169 26-109 (168)
141 4amu_A Ornithine carbamoyltran 35.8 1.1E+02 0.0036 28.8 7.9 25 170-196 280-304 (365)
142 3oa2_A WBPB; oxidoreductase, s 35.2 1.2E+02 0.0041 27.0 8.0 74 80-168 3-82 (318)
143 2p0y_A Hypothetical protein LP 35.1 39 0.0013 31.5 4.7 51 79-133 9-60 (341)
144 1rpn_A GDP-mannose 4,6-dehydra 34.5 1.7E+02 0.0059 25.2 8.8 77 80-167 14-94 (335)
145 2o2z_A Hypothetical protein; s 33.9 51 0.0017 30.5 5.2 38 79-120 3-40 (323)
146 2vt3_A REX, redox-sensing tran 33.4 39 0.0013 29.1 4.2 69 80-167 85-153 (215)
147 3l9w_A Glutathione-regulated p 33.3 1.1E+02 0.0039 28.6 7.8 72 80-166 4-75 (413)
148 3dlo_A Universal stress protei 32.7 1.1E+02 0.0038 23.7 6.6 44 123-169 84-127 (155)
149 3rfq_A Pterin-4-alpha-carbinol 32.2 43 0.0015 28.3 4.1 70 76-168 26-98 (185)
150 1rrv_A Glycosyltransferase GTF 31.9 2.6E+02 0.0088 25.1 9.8 82 81-168 1-103 (416)
151 3iwt_A 178AA long hypothetical 31.7 1.2E+02 0.0042 24.5 6.9 81 70-167 5-89 (178)
152 3pzy_A MOG; ssgcid, seattle st 31.5 38 0.0013 27.8 3.6 66 79-167 6-74 (164)
153 3kbq_A Protein TA0487; structu 31.4 26 0.0009 29.3 2.6 10 80-89 3-12 (172)
154 1kjq_A GART 2, phosphoribosylg 31.3 2E+02 0.0067 25.8 8.9 70 80-165 11-80 (391)
155 3a2k_A TRNA(Ile)-lysidine synt 31.3 43 0.0015 32.0 4.5 90 80-170 18-130 (464)
156 1uuy_A CNX1, molybdopterin bio 30.9 51 0.0017 26.9 4.3 20 149-168 57-80 (167)
157 3ic5_A Putative saccharopine d 30.9 1.4E+02 0.0049 21.2 8.5 73 80-167 5-77 (118)
158 1mio_B Nitrogenase molybdenum 30.7 1.4E+02 0.0046 28.4 7.9 80 80-171 312-397 (458)
159 1vkz_A Phosphoribosylamine--gl 30.7 41 0.0014 31.2 4.2 35 75-113 10-44 (412)
160 2dwc_A PH0318, 433AA long hypo 30.1 1.9E+02 0.0065 26.5 8.7 70 80-165 19-88 (433)
161 1y5e_A Molybdenum cofactor bio 29.7 13 0.00044 30.7 0.4 14 77-90 10-23 (169)
162 2ppv_A Uncharacterized protein 29.5 55 0.0019 30.4 4.7 38 79-120 3-40 (332)
163 2lbw_A H/ACA ribonucleoprotein 29.3 1E+02 0.0035 23.9 5.7 40 96-137 27-70 (121)
164 3c48_A Predicted glycosyltrans 29.2 73 0.0025 28.7 5.5 66 71-138 11-90 (438)
165 1qv9_A F420-dependent methylen 28.8 79 0.0027 28.4 5.3 103 53-167 8-121 (283)
166 4etn_A LMPTP, low molecular we 28.7 38 0.0013 28.5 3.2 78 79-168 33-119 (184)
167 3n8i_A Low molecular weight ph 28.5 52 0.0018 26.8 4.0 79 79-169 4-94 (157)
168 1u2p_A Ptpase, low molecular w 28.4 69 0.0024 26.0 4.7 77 80-169 4-92 (163)
169 2is8_A Molybdopterin biosynthe 28.1 46 0.0016 27.1 3.5 42 122-168 26-71 (164)
170 1jlj_A Gephyrin; globular alph 27.8 42 0.0014 28.3 3.3 11 79-89 13-23 (189)
171 1t5o_A EIF2BD, translation ini 27.6 1.6E+02 0.0053 27.4 7.5 70 90-172 164-237 (351)
172 3fro_A GLGA glycogen synthase; 27.6 77 0.0026 28.2 5.3 35 157-191 120-156 (439)
173 3u7q_B Nitrogenase molybdenum- 27.3 1.2E+02 0.004 29.6 6.9 86 80-176 364-455 (523)
174 2w70_A Biotin carboxylase; lig 27.2 87 0.003 29.1 5.8 78 80-165 2-80 (449)
175 4huj_A Uncharacterized protein 26.9 1.9E+02 0.0065 24.0 7.4 71 80-171 23-93 (220)
176 3kux_A Putative oxidoreductase 26.9 89 0.0031 28.1 5.6 34 80-116 7-41 (352)
177 3ff1_A Glucose-6-phosphate iso 26.9 39 0.0013 32.7 3.2 58 80-138 133-200 (446)
178 2ixa_A Alpha-N-acetylgalactosa 26.7 1.5E+02 0.0051 27.7 7.3 78 79-168 19-100 (444)
179 1ml4_A Aspartate transcarbamoy 26.6 1.4E+02 0.0049 27.1 6.9 94 80-191 155-269 (308)
180 3pdi_A Nitrogenase MOFE cofact 26.5 71 0.0024 30.8 5.1 83 80-173 332-415 (483)
181 3v7e_A Ribosome-associated pro 26.5 57 0.002 23.6 3.5 40 96-137 18-60 (82)
182 2g2c_A Putative molybdenum cof 26.2 37 0.0013 27.8 2.6 67 79-167 4-77 (167)
183 3p52_A NH(3)-dependent NAD(+) 26.2 1.1E+02 0.0038 26.6 5.9 55 80-138 26-88 (249)
184 3t38_A Arsenate reductase; low 25.9 1.4E+02 0.0048 25.6 6.4 79 78-169 79-163 (213)
185 4dim_A Phosphoribosylglycinami 25.7 1.1E+02 0.0038 27.7 6.1 72 80-167 7-79 (403)
186 1xng_A NH(3)-dependent NAD(+) 25.6 88 0.003 27.3 5.2 54 80-137 25-86 (268)
187 1sur_A PAPS reductase; assimil 25.6 94 0.0032 25.9 5.2 54 81-137 45-104 (215)
188 4etm_A LMPTP, low molecular we 25.5 71 0.0024 26.4 4.3 80 78-168 16-107 (173)
189 3bfj_A 1,3-propanediol oxidore 25.4 84 0.0029 29.0 5.2 64 109-172 34-105 (387)
190 2ahr_A Putative pyrroline carb 25.4 77 0.0026 26.9 4.7 47 80-132 3-49 (259)
191 3rxy_A NIF3 protein; structura 25.1 23 0.00079 32.2 1.2 82 78-166 193-276 (278)
192 3oj0_A Glutr, glutamyl-tRNA re 24.9 53 0.0018 25.4 3.2 68 80-167 21-88 (144)
193 1lc0_A Biliverdin reductase A; 24.5 59 0.002 28.7 3.8 37 78-116 5-43 (294)
194 4fu0_A D-alanine--D-alanine li 24.4 80 0.0027 28.6 4.8 36 79-116 2-44 (357)
195 2a0u_A Initiation factor 2B; S 24.4 1.6E+02 0.0055 27.7 7.0 70 90-172 195-268 (383)
196 1zzg_A Glucose-6-phosphate iso 24.3 41 0.0014 32.1 2.9 58 80-138 116-182 (415)
197 3csu_A Protein (aspartate carb 24.3 2.4E+02 0.0083 25.6 8.0 22 170-191 247-268 (310)
198 1d1q_A Tyrosine phosphatase (E 23.9 78 0.0027 25.6 4.2 78 79-168 6-96 (161)
199 2xzm_U Ribosomal protein L7AE 23.7 1.2E+02 0.004 23.9 5.1 39 98-138 33-75 (126)
200 3qvq_A Phosphodiesterase OLEI0 23.7 2.4E+02 0.008 24.1 7.6 37 122-166 202-238 (252)
201 2iyf_A OLED, oleandomycin glyc 23.7 3.9E+02 0.013 23.8 10.1 105 80-191 7-135 (430)
202 1vbk_A Hypothetical protein PH 23.2 1.6E+02 0.0053 26.5 6.5 77 80-169 179-265 (307)
203 2pn1_A Carbamoylphosphate synt 22.8 2.1E+02 0.0071 24.9 7.2 18 148-165 61-78 (331)
204 3j21_Z 50S ribosomal protein L 22.8 1.1E+02 0.0038 22.6 4.6 40 95-136 21-63 (99)
205 3m3h_A OPRT, oprtase, orotate 22.4 3.4E+02 0.012 23.4 8.3 57 79-137 136-196 (234)
206 3dzz_A Putative pyridoxal 5'-p 22.3 1.7E+02 0.0057 25.7 6.5 90 85-178 89-183 (391)
207 2nz2_A Argininosuccinate synth 22.3 1.1E+02 0.0037 29.0 5.4 54 80-136 5-63 (413)
208 1j32_A Aspartate aminotransfer 22.3 2E+02 0.0069 25.3 7.1 86 85-175 94-183 (388)
209 3ijp_A DHPR, dihydrodipicolina 21.9 1.2E+02 0.0041 27.3 5.4 36 81-117 20-56 (288)
210 1o4s_A Aspartate aminotransfer 21.7 1.5E+02 0.0052 26.4 6.1 87 85-176 105-195 (389)
211 3ly1_A Putative histidinol-pho 21.7 3.8E+02 0.013 22.9 8.9 87 85-177 72-163 (354)
212 2yvk_A Methylthioribose-1-phos 21.6 1.6E+02 0.0054 27.6 6.3 70 90-172 191-264 (374)
213 4id9_A Short-chain dehydrogena 21.4 3.6E+02 0.012 23.3 8.5 30 85-116 22-52 (347)
214 3uhf_A Glutamate racemase; str 21.4 2.9E+02 0.0098 24.5 7.8 90 78-186 22-115 (274)
215 3cq5_A Histidinol-phosphate am 21.1 3E+02 0.01 24.0 8.0 88 85-178 96-187 (369)
216 3tlk_A Ferrienterobactin-bindi 21.1 3.8E+02 0.013 23.4 8.6 73 77-169 43-125 (326)
217 2czc_A Glyceraldehyde-3-phosph 21.0 3.4E+02 0.012 24.3 8.4 51 80-134 2-52 (334)
218 2g1u_A Hypothetical protein TM 21.0 2.3E+02 0.008 21.8 6.5 73 80-167 19-92 (155)
219 3v7q_A Probable ribosomal prot 20.8 1.2E+02 0.0041 22.6 4.4 41 95-137 25-68 (101)
220 2pbq_A Molybdenum cofactor bio 20.8 1.3E+02 0.0043 24.8 5.0 12 79-90 4-15 (178)
221 1q77_A Hypothetical protein AQ 20.7 1.1E+02 0.0038 22.7 4.3 37 148-184 98-134 (138)
222 2fyw_A Conserved hypothetical 20.5 77 0.0026 28.0 3.7 52 80-139 177-228 (267)
223 2p6p_A Glycosyl transferase; X 20.5 2.9E+02 0.01 24.2 7.8 52 81-138 1-55 (384)
224 3tri_A Pyrroline-5-carboxylate 20.5 1.7E+02 0.0059 25.5 6.1 50 80-133 3-53 (280)
225 1t9k_A Probable methylthioribo 20.3 2.2E+02 0.0077 26.2 7.0 68 92-172 168-239 (347)
226 3bzy_B ESCU; auto cleavage pro 20.0 98 0.0033 22.7 3.6 14 122-135 32-45 (83)
No 1
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=4.5e-52 Score=372.62 Aligned_cols=205 Identities=25% Similarity=0.458 Sum_probs=187.2
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+++||+||+||+||||++|++++..+ ++++|++||||++++.++++|+++|||++.++...+..+..+++++++.|+++
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~ 82 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHY 82 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhc
Confidence 47899999999999999999999998 88999999999999988999999999999987655444444578899999999
Q ss_pred CCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEE
Q 022631 159 NVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRV 238 (294)
Q Consensus 159 ~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~ 238 (294)
++|++|+++||+|||+++++.|++++||+||||||+|||++ |++| ||.+|++++|+|+|+|++++|+||||.|+.
T Consensus 83 ~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~ 157 (215)
T 3tqr_A 83 DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLN----THER-ALAAGETEHGVSVHYVTEDLDAGPLICQAR 157 (215)
T ss_dssp CCSEEEESSCCSCCCHHHHHHTTTSEEEEESSSTTTTCSSC----HHHH-HHHTTCSEEEEEEEECC-CTTCSCEEEEEE
T ss_pred CCCEEEEccchhhCCHHHHhhccCCeEEeCcccCCCCCChh----HHHH-HHHcCCCeEEEEEEEEcCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999987 7777 599999999999999999999999999999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCCCCC
Q 022631 239 VPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSKENP 290 (294)
Q Consensus 239 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~~~~ 290 (294)
++|.++||.++|++|+.++++++++++|+.+.+|++.+.. +..++++.+.|
T Consensus 158 v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~-~~~~~~~~~~~ 208 (215)
T 3tqr_A 158 LSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRLNYHN-NQVFLDGKPLA 208 (215)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEET-TEEEETTEECC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEecC-CEEEEcCccCC
Confidence 9999999999999999999999999999999999998854 44556776654
No 2
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=1.4e-51 Score=368.03 Aligned_cols=191 Identities=37% Similarity=0.591 Sum_probs=175.8
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
.++||+||+||+|||+++|++++..+.++++|++||||++++.++++|+++|||++.++.+.+..++.+++++++.|+++
T Consensus 6 ~~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~ 85 (209)
T 4ds3_A 6 KRNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALDVL 85 (209)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999888999999999999988999999999999987655444445578999999999
Q ss_pred CCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEE
Q 022631 159 NVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRV 238 (294)
Q Consensus 159 ~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~ 238 (294)
++|++|+++||+|||+++++.|++++||+||||||+|||++ |++| ||.+|++++|+|+|+|++++|+||||.|+.
T Consensus 86 ~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~ 160 (209)
T 4ds3_A 86 KPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGLH----THQR-ALDAGMKLAGCTVHLVTEGMDEGPILAQAA 160 (209)
T ss_dssp CCSEEEESSCCSCCCHHHHGGGTTCEEEEESSCTTSSCSSC----HHHH-HHHTTCSEEEEEEEECCC--CCCCEEEEEE
T ss_pred CCCEEEEeccccCcCHHHHhhccCCeEEECCccccCCCChh----HHHH-HHHcCCCeEEEEEEEEcCCCCCCCeEEEEE
Confidence 99999999999999999999999999999999999999987 7777 599999999999999999999999999999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe
Q 022631 239 VPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERV 274 (294)
Q Consensus 239 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i 274 (294)
++|.++||.++|++|+..+++++++++|+.+.+|++
T Consensus 161 v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~ 196 (209)
T 4ds3_A 161 VPVLDGDTAETLAARVLKAEHRLYPLALQKFAAGEK 196 (209)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999998
No 3
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=2.6e-51 Score=366.29 Aligned_cols=205 Identities=27% Similarity=0.472 Sum_probs=187.0
Q ss_pred eeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCC
Q 022631 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNV 160 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~ 160 (294)
+|||||+||+||||++|++++..+.++++|++|||+++++.++++|+++|||++.++..++..++.+++++.+.|+++++
T Consensus 1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~ 80 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI 80 (209)
T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence 58999999999999999999999988899999999999988999999999999987755443333446788999999999
Q ss_pred cEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEEe
Q 022631 161 DFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVP 240 (294)
Q Consensus 161 DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~~ 240 (294)
|++|++|||+|||+++++.+++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+||||+|+.++
T Consensus 81 Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~ 155 (209)
T 1meo_A 81 DIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSN----AHEQ-ALETGVTVTGCTVHFVAEDVDAGQIILQEAVP 155 (209)
T ss_dssp CEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSC----HHHH-HHHHTCSEEEEEEEECCC---CCCEEEEEEEE
T ss_pred CEEEEcchhhhCCHHHHhhhcCCEEEEccCcCcCCCCcc----HHHH-HHHcCCCcEEEEEEEECCCCcCCCEEEEEEEe
Confidence 999999999999999999999999999999999999987 7777 59999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCCCCC
Q 022631 241 VLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSKENP 290 (294)
Q Consensus 241 I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~~~~ 290 (294)
|.++||.++|++|+..+++++++++|+.+.+|++..+.++..++.+.|.+
T Consensus 156 I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 205 (209)
T 1meo_A 156 VKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWVKEEHH 205 (209)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTSSEEECCCSCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcCCCeEEEeccccc
Confidence 99999999999999999999999999999999999999888888887764
No 4
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=3.2e-51 Score=370.37 Aligned_cols=214 Identities=33% Similarity=0.556 Sum_probs=189.5
Q ss_pred ecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHH
Q 022631 74 FDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 74 ~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~ 153 (294)
+....+++||+||+||+|++++++++++..+.++++|++|||+++++.++++|+++|||++.++..++..++.+++++++
T Consensus 16 ~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~ 95 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAE 95 (229)
T ss_dssp SSCBTTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHH
T ss_pred ccccCCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHH
Confidence 33445578999999999999999999998887778999999999999999999999999998775544333445688999
Q ss_pred HHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCce
Q 022631 154 ALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRI 233 (294)
Q Consensus 154 ~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~I 233 (294)
.|+++++|++|+++||+|||+++++.|++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+|||
T Consensus 96 ~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~I 170 (229)
T 3auf_A 96 RLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSLLPAFPGLE----AQRQ-ALEHGVKVAGCTVHFVTAGVDEGPI 170 (229)
T ss_dssp HHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSCTTSSCSSC----HHHH-HHHHTCSEEEEEEEECCSSTTCSCE
T ss_pred HHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccCcCcCCCCcC----HHHH-HHHcCCCeEEEEEEEECCCCcCCCE
Confidence 9999999999999999999999999999999999999999999987 7777 5999999999999999999999999
Q ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCCCCCCC
Q 022631 234 LAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSKENPDE 292 (294)
Q Consensus 234 I~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~~~~~~ 292 (294)
|+|+.++|.++||.++|++|+..+++++++++|+.+.+|++.+.++.+.+....++|++
T Consensus 171 i~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 229 (229)
T 3auf_A 171 ILQAAVPVLEGDTVEDLRRRILAEEHRIYPEAIRLFAEGRLVIEGRRVRILDRAEAPRG 229 (229)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEECC-------
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeCCEEEEcCCCCCCCC
Confidence 99999999999999999999999999999999999999999998888877777778875
No 5
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=9.6e-51 Score=364.02 Aligned_cols=199 Identities=30% Similarity=0.538 Sum_probs=182.6
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+++||+||+||+|||+++|++++..+.++++|++||||++++.++++|+++|||++.++... ..++++++.|+++
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~-----~~~~~~~~~L~~~ 81 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKP-----LDIEHISTVLREH 81 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTT-----BCHHHHHHHHHHT
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCccc-----CChHHHHHHHHHh
Confidence 37899999999999999999999888888999999999999988999999999999886533 3468899999999
Q ss_pred CCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEE
Q 022631 159 NVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRV 238 (294)
Q Consensus 159 ~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~ 238 (294)
++|++|+++||+|||+++++.|++++||+||||||+|||++ |++| ||.+|++++|+|+|+|++++|+||||.|+.
T Consensus 82 ~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~lD~G~Ii~Q~~ 156 (215)
T 3kcq_A 82 DVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLN----AQEQ-AYKAGVKIAGCTLHYVYQELDAGPIIMQAA 156 (215)
T ss_dssp TCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSC----HHHH-HHHHTCSEEEEEEEECCSSTTCSCEEEEEE
T ss_pred CCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCcc----HHHH-HHHcCCCeEEEEEEEEcCCCCCCCEEEEEE
Confidence 99999999999999999999999999999999999999987 7776 599999999999999999999999999999
Q ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCC
Q 022631 239 VPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSK 287 (294)
Q Consensus 239 ~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~ 287 (294)
++|.++||.++|++|+..+++++++++|+.+.+|++.+++++..++++.
T Consensus 157 v~I~~~dt~~~L~~rl~~~e~~ll~~~l~~~~~g~~~~~~~~~~~~~~~ 205 (215)
T 3kcq_A 157 VPVLREDTAESLASRILAAEHVCYPKGVKLIAQDKIKLCDDGTVQCTGE 205 (215)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECTTSCEEESSS
T ss_pred eecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEccCCEEEEeCC
Confidence 9999999999999999999999999999999999999855555555543
No 6
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=4.4e-51 Score=365.53 Aligned_cols=202 Identities=29% Similarity=0.517 Sum_probs=185.3
Q ss_pred eeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCC
Q 022631 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNV 160 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~ 160 (294)
+||+||+||+||||++|++++..+.++++|++|||+++++.++++|+++|||++.++..++..++.+++++++.|+++++
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~ 80 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP 80 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHhcCC
Confidence 48999999999999999999999988899999999999999999999999999988754443334456889999999999
Q ss_pred cEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEEe
Q 022631 161 DFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVP 240 (294)
Q Consensus 161 DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~~ 240 (294)
|++|++|||+|||+++++.|++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+||||.|+.++
T Consensus 81 Dliv~agy~~il~~~~l~~~~~~~iNiHpSlLP~yrG~~----pi~~-ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v~ 155 (212)
T 1jkx_A 81 DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLH----THRQ-ALENGDEEHGTSVHFVTDELDGGPVILQAKVP 155 (212)
T ss_dssp SEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSC----HHHH-HHHTTCSEEEEEEEECCSSTTCSCEEEEEEEE
T ss_pred CEEEEeChhhhCCHHHHhhccCCEEEEccCcccCCCCcc----HHHH-HHHcCCCceEEEEEEEcccccCCCEEEEEEEE
Confidence 999999999999999999999999999999999999987 7777 59999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCCC
Q 022631 241 VLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSKE 288 (294)
Q Consensus 241 I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~~ 288 (294)
|.++||.++|++|+..+++++++++|+.+.+|++..+++++. +.+++
T Consensus 156 I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~~-~~~~~ 202 (212)
T 1jkx_A 156 VFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAW-LDGQR 202 (212)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEE-ETTEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCceEeCCEEE-EcCCC
Confidence 999999999999999999999999999999999988766664 44544
No 7
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=1.8e-51 Score=367.60 Aligned_cols=191 Identities=37% Similarity=0.557 Sum_probs=178.3
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||+||+||+||||++|++++..|.++++|++||||+++++++++|+++|||++.++...+..++.+++++++.|++++
T Consensus 2 m~riavl~Sg~Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 81 (211)
T 3p9x_A 2 MKRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQ 81 (211)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEeCCchHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhcC
Confidence 58999999999999999999999999999999999999999999999999999998876544434445678999999999
Q ss_pred CcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEE
Q 022631 160 VDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVV 239 (294)
Q Consensus 160 ~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~ 239 (294)
+|++|++|||+|||+++++.+++|+||+||||||+|||++ |++| ||.+|++++|+|+|+|++++|+||||+|+.+
T Consensus 82 ~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v 156 (211)
T 3p9x_A 82 IDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLH----AIEQ-AIRANVKVTGVTIHYVDEGMDTGPIIAQEAV 156 (211)
T ss_dssp CCEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTSSCSSC----HHHH-HHHTTCSEEEEEEEECCSSSSCSCEEEEEEE
T ss_pred CCEEEEeCchhhcCHHHHhhccCCeEEECCccCCCCCCcc----HHHH-HHHcCCCeEEEEEEEEcCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999987 7777 5999999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCee
Q 022631 240 PVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVV 275 (294)
Q Consensus 240 ~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~ 275 (294)
+|.++||.++|.+|+..+++++++++|+.+.+|+..
T Consensus 157 ~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~ 192 (211)
T 3p9x_A 157 SIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAEN 192 (211)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCTTTC
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999754
No 8
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=5e-51 Score=365.83 Aligned_cols=204 Identities=31% Similarity=0.459 Sum_probs=183.9
Q ss_pred CCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 76 SGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 76 ~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
.+.+++||+||+||+||||++|++++.. .++++|++|+||++ ++++++|+++|||++.++.+.+..++.+++++++.|
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~-~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 85 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG-DYPARVVAVGVDRE-CRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAAT 85 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST-TCSEEEEEEEESSC-CHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc-cCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHH
Confidence 4566889999999999999999999854 56789999999986 888999999999999886544444455578899999
Q ss_pred HhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEE
Q 022631 156 SEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILA 235 (294)
Q Consensus 156 ~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~ 235 (294)
+++++|++|+++||+|||+++++.|++++||+||||||+|||++ |++| ||.+|++++|+|+|+|++++|+||||+
T Consensus 86 ~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~lD~G~Ii~ 160 (215)
T 3da8_A 86 AAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTH----GVAD-ALAYGVKVTGATVHLVDAGTDTGPILA 160 (215)
T ss_dssp HTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCSTT----HHHH-HHHHTCSEEEEEEEECCSSSSCSCEEE
T ss_pred HhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcccccCCCCch----HHHH-HHHcCCCeEEEEEEEEcCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999987 7776 599999999999999999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeeecCC
Q 022631 236 QRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIRSK 287 (294)
Q Consensus 236 Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~~~~ 287 (294)
|+.++|.++||.++|++|+..+|+++++++|+.+.+|++.+..+.+ .++||
T Consensus 161 Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~-~~~~~ 211 (215)
T 3da8_A 161 QQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTA-TMGRK 211 (215)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTEE-EECCC
T ss_pred EEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEeCCEE-EEeee
Confidence 9999999999999999999999999999999999999998855444 35555
No 9
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=1.8e-50 Score=376.44 Aligned_cols=211 Identities=25% Similarity=0.346 Sum_probs=193.6
Q ss_pred CCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 67 GDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 67 ~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
.+.++|+++...+++||+||+||+||||++|++++..|.++++|++||||++++ +.++|+++|||++.++.+. ..+..
T Consensus 75 ~~~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~A~~~gIp~~~~~~~~-~~r~~ 152 (287)
T 3nrb_A 75 KYNAEWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPRE-ALSVSLVGDIPFHYLPVTP-ATKAA 152 (287)
T ss_dssp GGTCEEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCCCCCTTSCEEECCCCG-GGHHH
T ss_pred HcCCeeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHHHHHcCCCEEEEeccC-cchhh
Confidence 456999999988899999999999999999999999999999999999999885 6688999999999987543 12233
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
+++++++.|+++++|++|++|||+|||++|++.|++++||+||||||+|||++ |.+| |+.+|++.+|+|+|+|++
T Consensus 153 ~~~~~~~~l~~~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSlLP~~rG~~----p~~~-Ai~~G~k~tG~Tvh~v~~ 227 (287)
T 3nrb_A 153 QESQIKNIVTQSQADLIVLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGAK----PYHQ-AHTRGVKLIGATAHFVTA 227 (287)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTTTCSSC----HHHH-HHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHHhCCCEEEhhhhhhhcCHHHHhhccCCeEEECcccccCCCCch----HHHH-HHHcCCCeEEEEEEEECC
Confidence 46789999999999999999999999999999999999999999999999997 7776 599999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeee
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVI 284 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~ 284 (294)
++|+||||.|+.++|.++||+++|.+|+.++|+++|+++|+.+++|++.+..+++.+.
T Consensus 228 ~lD~GpIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~~~~~vf 285 (287)
T 3nrb_A 228 DLDEGPIIAQDVEHVSHRDSAEDLVRKGRDIERRVLSRAVLLFLEDRLIVNGERTVVF 285 (287)
T ss_dssp SSSCCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEEC
T ss_pred CCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCEEEcCCEEEEc
Confidence 9999999999999999999999999999999999999999999999999877776554
No 10
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=1.5e-49 Score=356.21 Aligned_cols=198 Identities=27% Similarity=0.524 Sum_probs=182.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||+||+||+|++++++++++..+..+++|++|||+++++.++++|+++|||++.++..++..++.+++++++.|++++
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 80 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKG 80 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcC
Confidence 47999999999999999999998886667999999999999899999999999998765444333445688999999999
Q ss_pred CcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEE
Q 022631 160 VDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVV 239 (294)
Q Consensus 160 ~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~ 239 (294)
+|++|++|||+|||+++++.+++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+||||.|+.+
T Consensus 81 ~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-ai~~G~~~tGvTvh~v~~~~D~G~Ii~q~~~ 155 (216)
T 2ywr_A 81 VELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGLH----AQKQ-AVEFGVKFSGCTVHIVDESVDAGPVIVQAVV 155 (216)
T ss_dssp CCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCSTT----HHHH-HHHHTCSEEEEEEEECCSSSSCSCEEEEEEE
T ss_pred CCEEEEeCchhhCCHHHHhhccCCeEEEcCCcCcCCCCcc----HHHH-HHHcCCCeEEEEEEEEcccCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999987 7776 5999999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCee
Q 022631 240 PVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVP 282 (294)
Q Consensus 240 ~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~ 282 (294)
+|.++||.++|++|+..+++++++++|+.+.+|++.++.+.+.
T Consensus 156 ~i~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~~~~~~~~~ 198 (216)
T 2ywr_A 156 PVLPEDDENTLADRILKWEHKILPQTVQWFAQDRIIIDGRKVI 198 (216)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEE
T ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCeeE
Confidence 9999999999999999999999999999999999988766654
No 11
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.4e-50 Score=372.01 Aligned_cols=210 Identities=21% Similarity=0.310 Sum_probs=192.2
Q ss_pred CCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCC-CCCccHHHHHhCCCCEEEcCCCCCCCCC
Q 022631 67 GDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNK-PDCGGAEYARDNSIPVILFPKTKDEPNG 145 (294)
Q Consensus 67 ~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~-~~~~~~~~A~~~gIP~~~~~~~~~~~~~ 145 (294)
.+.++|+++...+++||+||+||+||||++|++++..|.++++|++||||+ +++ .++|+++|||++.++.+. ..+.
T Consensus 76 ~~~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~~~--~~~A~~~gIp~~~~~~~~-~~r~ 152 (288)
T 3obi_A 76 KFTMGWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPRET--FSGFDFGDIPFYHFPVNK-DTRR 152 (288)
T ss_dssp HTTCEEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCGGG--SCCTTTTTCCEEECCCCT-TTHH
T ss_pred HcCCEEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCChhH--HHHHHHcCCCEEEeCCCc-ccHH
Confidence 456999999988899999999999999999999999999999999999998 564 478999999999987643 2233
Q ss_pred CChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEec
Q 022631 146 LSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVD 225 (294)
Q Consensus 146 ~~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~ 225 (294)
.+++++++.|+++++|++|++|||+|||+++++.|++++||+||||||+|||++ |.+| ||.+|++.+|+|+|+|+
T Consensus 153 ~~~~~~~~~l~~~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~----p~~~-A~~~G~~~~G~Tvh~v~ 227 (288)
T 3obi_A 153 QQEAAITALIAQTHTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGAK----PYHQ-AFDRGVKLIGATAHYVT 227 (288)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSC----HHHH-HHHHTCSEEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcccccCCCCch----HHHH-HHHcCCCEEEEEEEEEC
Confidence 456789999999999999999999999999999999999999999999999997 7777 59999999999999999
Q ss_pred CCCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeeee
Q 022631 226 EHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVI 284 (294)
Q Consensus 226 ~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~~ 284 (294)
+++|+||||.|+.++|.++||+++|.+|+.++|+++|+++|+.+++|++.+..+++.+.
T Consensus 228 ~~~D~GpIi~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~~~~~vf 286 (288)
T 3obi_A 228 SALDEGPIIDQDVERISHRDTPADLVRKGRDIERRVLSRALHYHLDDRVILNGRKTVVF 286 (288)
T ss_dssp SSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEEC
T ss_pred CCCcCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcCCEEEEc
Confidence 99999999999999999999999999999999999999999999999998877766554
No 12
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=4.1e-49 Score=369.38 Aligned_cols=209 Identities=22% Similarity=0.345 Sum_probs=191.5
Q ss_pred CCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 67 GDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 67 ~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
.+.++|+++...+++||+||+||+||||++|++++..|.++++|++||||++++ .++|+++|||++.++.++ ..+..
T Consensus 92 ~l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Visn~~~~--~~~A~~~gIp~~~~~~~~-~~r~~ 168 (302)
T 3o1l_A 92 EFSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVISNHQDL--RSMVEWHDIPYYHVPVDP-KDKEP 168 (302)
T ss_dssp HHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEESSSTT--HHHHHTTTCCEEECCCCS-SCCHH
T ss_pred HhCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEECcHHH--HHHHHHcCCCEEEcCCCc-CCHHH
Confidence 345999999888899999999999999999999999999999999999999885 478999999999987543 22334
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
+++++++.|+++++|++|++|||+|||+++++.|++++||+||||||+|||++ |.+| |+.+|++.+|+|+|+|++
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym~IL~~~~l~~~~~~~INiHpSlLP~frG~~----p~~~-Ai~~G~k~tG~TvH~v~~ 243 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYMQILPPQLCREYAHQVINIHHSFLPSFVGAK----PYHQ-ASLRGVKLIGATCHYVTE 243 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCSCCCTTHHHHTTTCEEEEESSCTTSSCSSC----HHHH-HHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHHhCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcccccCCCCcc----HHHH-HHHcCCCeEEEEEEEECC
Confidence 56789999999999999999999999999999999999999999999999997 7776 599999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeee
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPV 283 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~ 283 (294)
++|+||||.|+.++|.++||+++|.+|+.++|+++|+++|+.+++|++.+..+++.+
T Consensus 244 ~lD~GpII~Q~~v~I~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~v~~~~~~~~v 300 (302)
T 3o1l_A 244 ELDAGPIIEQDVVRVSHRDSIENMVRFGRDVEKMVLARGLRAHLEDRVLVHDNKTVV 300 (302)
T ss_dssp STTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEE
T ss_pred CCcCCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcCCEEEE
Confidence 999999999999999999999999999999999999999999999999887766543
No 13
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=2.8e-49 Score=368.19 Aligned_cols=208 Identities=24% Similarity=0.325 Sum_probs=190.6
Q ss_pred CCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 67 GDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 67 ~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
.+.++|+++...+++||+||+||+||||++|++++..|.++++|++||||++++. ++|+++|||++.++.+. ..+..
T Consensus 77 ~l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~--~~A~~~gIp~~~~~~~~-~~r~~ 153 (286)
T 3n0v_A 77 AFGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVSNHPDLE--PLAHWHKIPYYHFALDP-KDKPG 153 (286)
T ss_dssp GGTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEESSSTTH--HHHHHTTCCEEECCCBT-TBHHH
T ss_pred HcCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEeCcHHHH--HHHHHcCCCEEEeCCCc-CCHHH
Confidence 4569999999888999999999999999999999999999999999999998854 67999999999887543 22333
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
+++++++.|+++++|++|++|||+|||+++++.|++++||+||||||+|||++ |.+| ||.+|++.+|+|+|+|++
T Consensus 154 ~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~----p~~~-Ai~~G~~~~G~Tvh~v~~ 228 (286)
T 3n0v_A 154 QERKVLQVIEETGAELVILARYMQVLSPELCRRLDGWAINIHHSLLPGFKGAK----PYHQ-AYNKGVKMVGATAHYINN 228 (286)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEECSSTTCCCSC----HHHH-HHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHhcCCCEEEecccccccCHHHHhhhcCCeEEeccccccCCCCcc----HHHH-HHHcCCCeEEEEEEEEcC
Confidence 46789999999999999999999999999999999999999999999999997 7776 599999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCee
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVP 282 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~ 282 (294)
++|+||||.|+.++|.++||+++|.+|+.++|+++|+++|+.+++|++.+..++..
T Consensus 229 ~lD~GpIi~Q~~~~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~~~~~ 284 (286)
T 3n0v_A 229 DLDEGPIIAQGVEVVDHSHYPEDLIAKGRDIECLTLARAVGYHIERRVFLNANRTV 284 (286)
T ss_dssp STTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEE
T ss_pred CCCCCceeEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcCCEEE
Confidence 99999999999999999999999999999999999999999999999988766543
No 14
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.5e-49 Score=355.52 Aligned_cols=194 Identities=38% Similarity=0.607 Sum_probs=174.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||+||+||+|+|++++++++..+.++++|++|||++++++++++|+++|||++.++..++..++.+++++++.|++++
T Consensus 3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (212)
T 3av3_A 3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQ 82 (212)
T ss_dssp CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcC
Confidence 57999999999999999999999887778999999999999999999999999998775544333445678999999999
Q ss_pred CcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEE
Q 022631 160 VDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVV 239 (294)
Q Consensus 160 ~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~ 239 (294)
+|++|++|||+|||+++++.|++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+||||+|+.+
T Consensus 83 ~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~----pi~~-Ai~~G~~~tGvTvh~v~~~~D~G~Ii~Q~~v 157 (212)
T 3av3_A 83 IDWIALAGYMRLIGPTLLSAYEGKIVNIHPSLLPAFPGKD----AIGQ-AYRAGVSETGVTVHYVDEGMDTGPVIAQRVV 157 (212)
T ss_dssp CCEEEESSCCSCCCHHHHHHTTTCEEEEESSCTTSSCSTT----HHHH-HHHHTCSEEEEEEEECCSSSSCSCEEEEEEE
T ss_pred CCEEEEchhhhhCCHHHHhhhcCCEEEEecCcCCCCCCcC----HHHH-HHHcCCCeEEEEEEEECCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999999999987 7776 5999999999999999999999999999999
Q ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeec
Q 022631 240 PVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRE 278 (294)
Q Consensus 240 ~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~ 278 (294)
+|.++||.++|++|+...++++++++|+.+.+|++.+.+
T Consensus 158 ~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~~~~~ 196 (212)
T 3av3_A 158 PIVPGEPIEALEERIHQVEHELYPTVLRMLLGEKEQQEE 196 (212)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999986544
No 15
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=2.4e-49 Score=369.55 Aligned_cols=209 Identities=24% Similarity=0.325 Sum_probs=191.6
Q ss_pred CCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 67 GDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 67 ~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
.+.++|+++...+++||+||+||+||||++|++++..|.++++|++||||++++. ++|+++|||++.++.+. ..+..
T Consensus 82 ~~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Visn~~~~~--~~A~~~gIp~~~~~~~~-~~r~~ 158 (292)
T 3lou_A 82 RFRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVSNHPDFA--PLAAQHGLPFRHFPITA-DTKAQ 158 (292)
T ss_dssp HHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSSTTH--HHHHHTTCCEEECCCCS-SCHHH
T ss_pred hcCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEeCcHHHH--HHHHHcCCCEEEeCCCc-CCHHH
Confidence 3459999999888999999999999999999999999999999999999998864 67999999999987543 22333
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
+++++++.|+++++|++|++|||+|||+++++.|++++||+||||||+|||++ |.+| ||.+|++.+|+|+|+|++
T Consensus 159 ~~~~~~~~l~~~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~----p~~~-Ai~~G~~~~G~Tvh~v~~ 233 (292)
T 3lou_A 159 QEAQWLDVFETSGAELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGAK----PYHQ-AHARGVKLIGATAHFVTD 233 (292)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSC----HHHH-HHHHTCSEEEEEEEECCS
T ss_pred HHHHHHHHHHHhCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCcCcCCCCcc----HHHH-HHHcCCCeEEEEEEEEcC
Confidence 46789999999999999999999999999999999999999999999999997 7777 599999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecCCeee
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPV 283 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~~~~~ 283 (294)
++|+||||.|+.++|.++||+++|.+|+.++|+++|+++|+.+++|++.+..++..+
T Consensus 234 ~lD~G~Ii~Q~~v~i~~~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~~~~~~~~~v 290 (292)
T 3lou_A 234 DLDEGPIIEQVVERVDHSYRPEQLLAVGRDVECITLARAVKAFIERRVFLNGDRTVV 290 (292)
T ss_dssp STTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEE
T ss_pred CCcCCCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEcCCEEEE
Confidence 999999999999999999999999999999999999999999999999887766554
No 16
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=2.7e-41 Score=318.12 Aligned_cols=183 Identities=18% Similarity=0.263 Sum_probs=163.6
Q ss_pred CceeEEEEEeCC--chHHHHHHHHHHcCCCCceEEEEecCCCC----------CccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGG--GSNFRSIHAACLAGSVYGDVVVLVTNKPD----------CGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~--gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~----------~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
+++||+++.|+. .++|++|+++ .++|++|||+++. ++++++|+++|||++.. +..
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~------~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~-------~~~ 68 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS------GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQP-------VSL 68 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT------TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECC-------SCS
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEec-------CCC
Confidence 368999998875 6888888763 2699999998542 35789999999998743 224
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
+++++++.|+++++|++|+++||+|||+++++.+++|+||+||||||+|||++ |++|+ |.+|+++||+|+|+|++
T Consensus 69 ~~~~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~----pi~~A-i~~G~~~tGvTih~~~~ 143 (314)
T 1fmt_A 69 RPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA----PIQRS-LWAGDAETGVTIMQMDV 143 (314)
T ss_dssp CSHHHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSC----HHHHH-HHHTCSEEEEEEEECCS
T ss_pred CCHHHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcCcCCCCcC----HHHHH-HHcCCCceEEEEEEEcc
Confidence 46789999999999999999999999999999999999999999999999997 88885 99999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecC
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
++|+||||+|+.++|.++||.++|++|+..+++++++++|+.+.+|++...++
T Consensus 144 ~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q 196 (314)
T 1fmt_A 144 GLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQ 196 (314)
T ss_dssp SSSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCC
T ss_pred cCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecC
Confidence 99999999999999999999999999999999999999999999998766554
No 17
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=1.9e-41 Score=318.01 Aligned_cols=181 Identities=22% Similarity=0.286 Sum_probs=163.1
Q ss_pred eeEEEEEeCC--chHHHHHHHHHHcCCCCceEEEEecCCCCC-------ccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 81 KNLAVFVSGG--GSNFRSIHAACLAGSVYGDVVVLVTNKPDC-------GGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 81 ~rIaVl~SG~--gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~-------~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
+||++|.|+. +++|++|+++ .++|++|||++++. +++++|+++|||++..++ .+++++
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~-------~~~~~~ 67 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN-------VNHPLW 67 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC-------CCSHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCc-------CCcHHH
Confidence 4899998874 7889988875 46899999987653 589999999999987553 235688
Q ss_pred HHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCC
Q 022631 152 VAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTG 231 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G 231 (294)
++.|+++++|++|+++||+|||+++|+.+++|+||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+|
T Consensus 68 ~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~----pi~~-ai~~G~~~tGvTih~~~~~~D~G 142 (305)
T 2bln_A 68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRA----PLNW-VLVNGETETGVTLHRMVKRADAG 142 (305)
T ss_dssp HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESC----HHHH-HHHTTCSEEEEEEEECCSSTTCS
T ss_pred HHHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCCcCcCCCCcc----HHHH-HHHcCCCcEEEEEEEECCCccCC
Confidence 999999999999999999999999999999999999999999999997 8887 59999999999999999999999
Q ss_pred ceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecC
Q 022631 232 RILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 232 ~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
|||+|+.++|.++||.++|++|+..+++++++++|+.+.+|++...++
T Consensus 143 ~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q 190 (305)
T 2bln_A 143 AIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQ 190 (305)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCC
T ss_pred CeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecC
Confidence 999999999999999999999999999999999999999998766543
No 18
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=7.7e-40 Score=309.99 Aligned_cols=188 Identities=25% Similarity=0.330 Sum_probs=164.3
Q ss_pred CceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHH
Q 022631 79 KKKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~ 153 (294)
+++||+|| ++++|.. +++++... .++|++|||.++. .+++++|+++|||++..++.+ .++.+++++++
T Consensus 21 ~~mrIvf~---G~~~fa~~~L~~L~~~--~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~--~~~~~~~~~~~ 93 (329)
T 2bw0_A 21 QSMKIAVI---GQSLFGQEVYCHLRKE--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWR--AKGQALPDVVA 93 (329)
T ss_dssp CCCEEEEE---CCHHHHHHHHHHHHHT--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCE--ETTEECHHHHH
T ss_pred CCCEEEEE---cCcHHHHHHHHHHHHC--CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCccc--ccccccHHHHH
Confidence 35799988 4688884 78887765 3689999995532 457899999999999876422 12345678999
Q ss_pred HHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCce
Q 022631 154 ALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRI 233 (294)
Q Consensus 154 ~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~I 233 (294)
.|+++++|++|+++||+|||+++|+.+++|+||+||||||+|||++ |++| ||.+|+++||||+|+|++++|+|||
T Consensus 94 ~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~----pi~~-Ai~~G~~~tGvTvh~~~~~lDtG~I 168 (329)
T 2bw0_A 94 KYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGAS----AINW-TLIHGDKKGGFSIFWADDGLDTGDL 168 (329)
T ss_dssp HHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSC----HHHH-HHHTTCSEEEEEEEECCSSSSCSCE
T ss_pred HHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcCcCCCCcC----HHHH-HHHcCCCcEEEEEEEECCcCcCCCE
Confidence 9999999999999999999999999999999999999999999998 8887 5999999999999999999999999
Q ss_pred EEEEEEeCCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHhCCeeeec
Q 022631 234 LAQRVVPVLWNDTAEDLAARV-LLEEHRLYVDVASALCEERVVWRE 278 (294)
Q Consensus 234 I~Q~~~~I~~~dt~~~L~~rl-~~~~~~ll~~~l~~l~~g~i~~~~ 278 (294)
|+|+.++|.++||.++|++|+ ..++.+++.++|+.+.+|++....
T Consensus 169 i~Q~~v~I~~~dt~~~L~~r~l~~~~~~ll~~~l~~l~~g~~~~~~ 214 (329)
T 2bw0_A 169 LLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLP 214 (329)
T ss_dssp EEEEEEECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCBC
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccc
Confidence 999999999999999999994 789999999999999999875544
No 19
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=3e-39 Score=304.70 Aligned_cols=184 Identities=18% Similarity=0.286 Sum_probs=155.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC----------CccHHHHHhCCCCEEEcCCCCCCCCCCChh
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD----------CGGAEYARDNSIPVILFPKTKDEPNGLSPN 149 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~----------~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~ 149 (294)
++||+++ |+..-....++++... .++|++|||+++. ++++++|+++|||++.. +..+++
T Consensus 7 ~mrivf~--Gt~~fa~~~L~~L~~~--~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~-------~~~~~~ 75 (318)
T 3q0i_A 7 SLRIVFA--GTPDFAARHLAALLSS--EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQP-------ENFKSD 75 (318)
T ss_dssp CCEEEEE--CCSHHHHHHHHHHHTS--SSEEEEEECCCC---------CCCHHHHHHHHTTCCEECC-------SCSCSH
T ss_pred CCEEEEE--ecCHHHHHHHHHHHHC--CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEcc-------CcCCCH
Confidence 4566655 4443222333443332 4799999997642 34689999999998742 234467
Q ss_pred HHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCC
Q 022631 150 DLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYD 229 (294)
Q Consensus 150 ~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D 229 (294)
++++.|+++++|++|+++||+|||+++++.+++|+||+||||||+|||++ |++|+ |.+|+++||+|+|+|++++|
T Consensus 76 ~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~----pi~~A-i~~G~~~tGvTih~~~~~~D 150 (318)
T 3q0i_A 76 ESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA----PIQRS-IWAGDSETGVTIMQMDVGLD 150 (318)
T ss_dssp HHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSSTTTTBSSC----HHHHH-HHHTCSEEEEEEEECCSSSS
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCccCcCCCCcC----HHHHH-HHcCCCeEEEEEEEEcCCCC
Confidence 89999999999999999999999999999999999999999999999997 88885 99999999999999999999
Q ss_pred CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecC
Q 022631 230 TGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 230 ~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
+||||+|+.++|.++||.++|++|+..+++++++++|+.+.+|++....+
T Consensus 151 ~G~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q 200 (318)
T 3q0i_A 151 TGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQ 200 (318)
T ss_dssp CSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCBCC
T ss_pred CCCEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccC
Confidence 99999999999999999999999999999999999999999998765554
No 20
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=3.7e-39 Score=303.94 Aligned_cols=183 Identities=22% Similarity=0.273 Sum_probs=155.9
Q ss_pred CceeEEEEEeCCc--hHHHHHHHHHHcCCCCceEEEEecCCCC----------CccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGG--SNFRSIHAACLAGSVYGDVVVLVTNKPD----------CGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~----------~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
+++||+++.+..- .+|++|+++ .++|++|||+++. .+++++|+++|||++... ..
T Consensus 3 ~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~-------~~ 69 (317)
T 3rfo_A 3 AMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPL-------RI 69 (317)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCS-------CT
T ss_pred CceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccc-------cC
Confidence 3567666632211 234444432 3699999998754 246899999999987432 34
Q ss_pred ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecC
Q 022631 147 SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~ 226 (294)
++++.++.|+++++|++|+++||+|||+++|+.+++|+||+||||||+|||++ |++|+ |.+|+++||+|+|+|++
T Consensus 70 ~~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~----pi~~A-i~~G~~~tGvTih~~~~ 144 (317)
T 3rfo_A 70 REKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGA----PIHYA-IMEGKEKTGITIMYMVE 144 (317)
T ss_dssp TSHHHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCTTSSBSSC----HHHHH-HHTTCSEEEEEEEECCS
T ss_pred CCHHHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccCcCCCCcC----HHHHH-HHcCCCceEEEEEEEcc
Confidence 45678899999999999999999999999999999999999999999999987 88885 89999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecC
Q 022631 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 227 ~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
++|+||||+|+.++|.++||.++|++|+..+++++++++|+.+.+|++...++
T Consensus 145 ~~DtG~Ii~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~~~~~Q 197 (317)
T 3rfo_A 145 KLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQ 197 (317)
T ss_dssp STTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBCC
T ss_pred cCCCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence 99999999999999999999999999999999999999999999998765544
No 21
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=2.7e-39 Score=304.56 Aligned_cols=161 Identities=28% Similarity=0.396 Sum_probs=145.9
Q ss_pred CceEEEEecCCCC----------CccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEeccccccChhH
Q 022631 107 YGDVVVLVTNKPD----------CGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMEL 176 (294)
Q Consensus 107 ~~eI~~Vvt~~~~----------~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy~~ilp~~~ 176 (294)
.++|++|||+++. .+++++|+++|||++.. +..+++++++.|+++++|++|+++||+|||+++
T Consensus 25 ~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~-------~~~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~i 97 (314)
T 3tqq_A 25 SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQP-------FSLRDEVEQEKLIAMNADVMVVVAYGLILPKKA 97 (314)
T ss_dssp SSEEEEEECCCC----------CCHHHHHHHHTTCCEECC-------SCSSSHHHHHHHHTTCCSEEEEESCCSCCCHHH
T ss_pred CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECc-------ccCCCHHHHHHHHhcCCCEEEEcCcccccCHHH
Confidence 3689999997542 34679999999998743 234567899999999999999999999999999
Q ss_pred HhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCCceEEEEEEeCCCCCCHHHHHHHHHH
Q 022631 177 IRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLL 256 (294)
Q Consensus 177 l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G~II~Q~~~~I~~~dt~~~L~~rl~~ 256 (294)
++.+++|+||+||||||+|||++ |++|+ |.+|+++||+|+|+|++++|+||||+|+.++|.++||.++|++|+..
T Consensus 98 l~~~~~g~iNiHpSlLP~yRG~~----pi~~A-i~~G~~~tGvTih~~~~~~D~G~Ii~q~~~~I~~~dt~~~L~~rl~~ 172 (314)
T 3tqq_A 98 LNAFRLGCVNVHASLLPRWRGAA----PIQRA-ILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADLHDRLSL 172 (314)
T ss_dssp HTSSTTCEEEEESSCTTTTBSSC----HHHHH-HHHTCSEEEEEEEECCSSSSCSCEEEEEEEECCTTCCHHHHHHHHHH
T ss_pred HhhCcCCEEEecCccccCCCCcc----HHHHH-HHcCCCeeEEEEEeeecCCCCCCEEEEEEEeeCCCCCHHHHHHHHHH
Confidence 99999999999999999999997 88885 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCeeeecC
Q 022631 257 EEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 257 ~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
+++++++++|+.+.+|++....+
T Consensus 173 ~~~~ll~~~l~~l~~g~~~~~~Q 195 (314)
T 3tqq_A 173 IGADLLLESLAKLEKGDIKLEKQ 195 (314)
T ss_dssp HHHHHHHHHHHHHHHTCCCCBCC
T ss_pred HHHHHHHHHHHHHHcCCCCcCcC
Confidence 99999999999999998765554
No 22
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=6.9e-39 Score=325.47 Aligned_cols=181 Identities=22% Similarity=0.283 Sum_probs=164.6
Q ss_pred eeEEEEEeCC--chHHHHHHHHHHcCCCCceEEEEecCCCCC-------ccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 81 KNLAVFVSGG--GSNFRSIHAACLAGSVYGDVVVLVTNKPDC-------GGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 81 ~rIaVl~SG~--gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~-------~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
+||+||+|+. +++|++|+++ .++|++|||++++. +++++|+++|||++..++. +++++
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~-------~~~~~ 67 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV-------NHPLW 67 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC--------CCHHHHHHHHTCCEECCSCT-------TSHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCCC-------CcHHH
Confidence 4899999986 8999999886 47999999998763 5899999999999876532 35688
Q ss_pred HHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCCCCCC
Q 022631 152 VAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTG 231 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~~D~G 231 (294)
++.|+++++|++|+++||+|||+++|+.+++++||+||||||+|||++ |++| ||.+|+++||+|+|+|++++|+|
T Consensus 68 ~~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slLP~~rG~~----p~~~-ai~~g~~~~G~t~~~~~~~~D~G 142 (660)
T 1z7e_A 68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRA----PLNW-VLVNGETETGVTLHRMVKRADAG 142 (660)
T ss_dssp HHHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSSTTTTCSSC----HHHH-HHHTTCSEEEEEEEECCSSTTTS
T ss_pred HHHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcCCCCCCcc----HHHH-HHHcCCCcEEEEEEEECCCccCC
Confidence 999999999999999999999999999999999999999999999998 7877 59999999999999999999999
Q ss_pred ceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeecC
Q 022631 232 RILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWRED 279 (294)
Q Consensus 232 ~II~Q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~i~~~~~ 279 (294)
|||+|+.++|.++||.++|++|+..+++++++++|+.+.+|++...++
T Consensus 143 ~ii~q~~~~i~~~dt~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~q 190 (660)
T 1z7e_A 143 AIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQ 190 (660)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCBCC
T ss_pred CeeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeeC
Confidence 999999999999999999999999999999999999999998776554
No 23
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=99.96 E-value=4.7e-30 Score=235.55 Aligned_cols=118 Identities=22% Similarity=0.271 Sum_probs=106.0
Q ss_pred hhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCCCCCCCCCCCcchHHHHHHHcCCCEEEEEEEEecCC
Q 022631 148 PNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEH 227 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~~~yg~pv~~~aI~~G~~~tGvTvH~v~~~ 227 (294)
++++++.|+++++|++|+++||+|||+++++. +|+||+||||||+|||++ |++| ||.+|+++||||+|+|+++
T Consensus 66 ~~~~~~~L~~~~pDliv~~~y~~ilp~~il~~--~g~iNiHpSLLP~yRG~~----pi~~-Ai~~G~~~tGvTih~~~~~ 138 (260)
T 1zgh_A 66 DELTFEKVKLINPEYILFPHWSWIIPKEIFEN--FTCVVFHMTDLPFGRGGS----PLQN-LIERGIKKTKISAIKVDGG 138 (260)
T ss_dssp GGCCHHHHHHHCCSEEEESSCCSCCCHHHHTT--SCEEEEESSCTTTTEESC----HHHH-HHHTTCCEEEEEEEECCSS
T ss_pred CHHHHHHHHhcCCCEEEEeccccccCHHHHcc--CCEEEEeCCcCCCCCCcC----HHHH-HHHcCCCcEEEEEEEEccC
Confidence 45677889999999999999999999999996 579999999999999997 8888 4999999999999999999
Q ss_pred CCCCceEEEEEEeCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhCCeeeec
Q 022631 228 YDTGRILAQRVVPVLWNDTAEDLAARVLLEEH-RLYVDVASALCEERVVWRE 278 (294)
Q Consensus 228 ~D~G~II~Q~~~~I~~~dt~~~L~~rl~~~~~-~ll~~~l~~l~~g~i~~~~ 278 (294)
+|+||||+|+.++|. ||.++|++|+..++. +++.+++ +|++...+
T Consensus 139 lDtG~Ii~Q~~v~I~--dt~~~L~~rl~~~~~~~ll~~~~----~g~~~~~p 184 (260)
T 1zgh_A 139 IDTGDIFFKRDLDLY--GTAEEIFMRASKIIFNDMIPELL----TKRPVPQK 184 (260)
T ss_dssp SSCSCEEEEEEEECC--SCHHHHHHHHHHHHHHTHHHHHH----HHCCCCBC
T ss_pred ccCCCeEEEEEEecc--CCHHHHHHHHHHHHHHHHHHHHH----cCCCccee
Confidence 999999999999999 999999999999999 8877654 45554433
No 24
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=92.39 E-value=0.28 Score=43.85 Aligned_cols=86 Identities=23% Similarity=0.134 Sum_probs=53.2
Q ss_pred eeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC------------CccHHHHHhCCCCEEEcCCCCCCCCCCCh
Q 022631 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD------------CGGAEYARDNSIPVILFPKTKDEPNGLSP 148 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~------------~~~~~~A~~~gIP~~~~~~~~~~~~~~~d 148 (294)
+|++|++|||--..-++..+...| .+|+++++.-+. ..+...|+..|||++.++-... .+...
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G---~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~--~~~e~ 79 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNR---FSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE--KEKEV 79 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTT---CEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CH
T ss_pred CEEEEEecCcHHHHHHHHHHHHcC---CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC--chHHH
Confidence 689999999765555555555554 578777543221 1245789999999988874321 12234
Q ss_pred hHHHHHHHhcCCcEEEEeccccccCh
Q 022631 149 NDLVAALSEVNVDFILLAGYLKLIPM 174 (294)
Q Consensus 149 ~~l~~~L~~~~~DliV~agy~~ilp~ 174 (294)
+++.+.|++.+++.+| ++-|..+
T Consensus 80 e~l~~~l~~~~i~~vv---~Gdi~s~ 102 (237)
T 3rjz_A 80 EDLKRVLSGLKIQGIV---AGALASK 102 (237)
T ss_dssp HHHHHHHTTSCCSEEE---CC---CC
T ss_pred HHHHHHHHhcCCcEEE---ECCcchH
Confidence 6788888888888887 4455543
No 25
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=87.69 E-value=1.1 Score=40.91 Aligned_cols=47 Identities=15% Similarity=0.086 Sum_probs=31.0
Q ss_pred CceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEec
Q 022631 107 YGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 107 ~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ag 167 (294)
..+|++|....+ ....++|+++|+|-.+- +.-+.|+.-++|+|+++.
T Consensus 56 ~~~lvav~d~~~-~~a~~~a~~~g~~~~y~-------------d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 56 RPRLVHLAEANA-GLAEARAGEFGFEKATA-------------DWRALIADPEVDVVSVTT 102 (393)
T ss_dssp CCEEEEEECC---TTHHHHHHHHTCSEEES-------------CHHHHHHCTTCCEEEECS
T ss_pred CcEEEEEECCCH-HHHHHHHHHhCCCeecC-------------CHHHHhcCCCCcEEEECC
Confidence 468888776433 34678999999985531 233456677889888765
No 26
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=87.11 E-value=1.1 Score=35.28 Aligned_cols=69 Identities=17% Similarity=0.234 Sum_probs=44.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++|++|+ |.|...+.+++.+.... .+++++++.+.+..... .-.|+|++- .+++.+.+++.+
T Consensus 4 ~~~vlIi--GaG~~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~---~i~g~pV~g------------~~~l~~~~~~~~ 65 (141)
T 3nkl_A 4 KKKVLIY--GAGSAGLQLANMLRQGK-EFHPIAFIDDDRKKHKT---TMQGITIYR------------PKYLERLIKKHC 65 (141)
T ss_dssp CEEEEEE--CCSHHHHHHHHHHHHSS-SEEEEEEECSCGGGTTC---EETTEEEEC------------GGGHHHHHHHHT
T ss_pred CCEEEEE--CCCHHHHHHHHHHHhCC-CcEEEEEEECCcccCCC---EecCeEEEC------------HHHHHHHHHHCC
Confidence 5566665 66777777777766542 57899988765432111 125778763 135667777888
Q ss_pred CcEEEEe
Q 022631 160 VDFILLA 166 (294)
Q Consensus 160 ~DliV~a 166 (294)
+|.++++
T Consensus 66 id~viia 72 (141)
T 3nkl_A 66 ISTVLLA 72 (141)
T ss_dssp CCEEEEC
T ss_pred CCEEEEe
Confidence 8877766
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=87.04 E-value=1.4 Score=40.65 Aligned_cols=86 Identities=16% Similarity=0.118 Sum_probs=45.6
Q ss_pred CceeEEEEEeCC-chHH--HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCC----CC----
Q 022631 79 KKKNLAVFVSGG-GSNF--RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNG----LS---- 147 (294)
Q Consensus 79 ~~~rIaVl~SG~-gs~l--~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~----~~---- 147 (294)
|++||.+-++|+ |+.+ .+|.+++++. .++|..|-+ ... --.++..+.|++++.++......+. +.
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~--g~~V~~vg~-~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 76 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQAR--GYAVHWLGT-PRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLE 76 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEEEC-SSS-THHHHTGGGTCCEEECC--------------CHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhC--CCEEEEEEC-Cch-HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHH
Confidence 356776655554 3443 3455555543 357765543 322 1235677889999887643321111 00
Q ss_pred ----hhHHHHHHHhcCCcEEEEecc
Q 022631 148 ----PNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 148 ----d~~l~~~L~~~~~DliV~agy 168 (294)
-.+..+.|++++||++|..|.
T Consensus 77 ~~~~~~~~~~~l~~~~PDvVi~~g~ 101 (365)
T 3s2u_A 77 LLKSLFQALRVIRQLRPVCVLGLGG 101 (365)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 013346688999999998764
No 28
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=85.70 E-value=1.1 Score=40.97 Aligned_cols=73 Identities=12% Similarity=0.041 Sum_probs=43.9
Q ss_pred CceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh
Q 022631 79 KKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE 157 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~ 157 (294)
.+.||+|+..| .--+ ..+.++..- ...+|++|... ......++|+++|+|-.+- ++-+.|+.
T Consensus 22 ~mirigiIG~G--~ig~~~~~~~~~~~-~~~~lvav~d~-~~~~a~~~a~~~g~~~~y~-------------d~~ell~~ 84 (350)
T 4had_A 22 SMLRFGIISTA--KIGRDNVVPAIQDA-ENCVVTAIASR-DLTRAREMADRFSVPHAFG-------------SYEEMLAS 84 (350)
T ss_dssp CCEEEEEESCC--HHHHHTHHHHHHHC-SSEEEEEEECS-SHHHHHHHHHHHTCSEEES-------------SHHHHHHC
T ss_pred CccEEEEEcCh--HHHHHHHHHHHHhC-CCeEEEEEECC-CHHHHHHHHHHcCCCeeeC-------------CHHHHhcC
Confidence 47899999444 2222 123333321 24688877653 3334568899999985431 23345667
Q ss_pred cCCcEEEEecc
Q 022631 158 VNVDFILLAGY 168 (294)
Q Consensus 158 ~~~DliV~agy 168 (294)
-++|+|+++.-
T Consensus 85 ~~iDaV~I~tP 95 (350)
T 4had_A 85 DVIDAVYIPLP 95 (350)
T ss_dssp SSCSEEEECSC
T ss_pred CCCCEEEEeCC
Confidence 78999888753
No 29
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=85.23 E-value=1.3 Score=38.85 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=60.8
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC-CccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD-CGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE 157 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~-~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~ 157 (294)
++.|++|+ |.|..-++|+.........+++++++-+.++ .-+. +.-.|+|+.-. +++.+.+++
T Consensus 83 ~~~~V~Iv--GaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~--~~i~GvpV~~~------------~dL~~~v~~ 146 (212)
T 3keo_A 83 STTNVMLV--GCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGK--TTEDGIPVYGI------------STINDHLID 146 (212)
T ss_dssp SCEEEEEE--CCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTC--BCTTCCBEEEG------------GGHHHHC-C
T ss_pred CCCEEEEE--CcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCc--eeECCeEEeCH------------HHHHHHHHH
Confidence 35666666 6666666666553223346789999976554 3222 12368998853 356778889
Q ss_pred cCCcEEEEeccccccChhHHh----cCCCCEEEEcCCCCCC
Q 022631 158 VNVDFILLAGYLKLIPMELIR----AYPRSIVNIHPSLLPA 194 (294)
Q Consensus 158 ~~~DliV~agy~~ilp~~~l~----~~~~g~iNiHPSlLP~ 194 (294)
.++|.++++-= ..-.+++.+ .-=.+++|+=|--|--
T Consensus 147 ~~Id~vIIAvP-s~~aq~v~d~lv~~GIk~I~nFap~~l~v 186 (212)
T 3keo_A 147 SDIETAILTVP-STEAQEVADILVKAGIKGILSFSPVHLTL 186 (212)
T ss_dssp CSCCEEEECSC-GGGHHHHHHHHHHHTCCEEEECSSSCCCC
T ss_pred cCCCEEEEecC-chhHHHHHHHHHHcCCCEEEEcCCcccCC
Confidence 99999999842 111223333 3336899999988754
No 30
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=84.04 E-value=1.1 Score=42.03 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=31.7
Q ss_pred CCceeEEEEEeCCchHH-HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 78 IKKKNLAVFVSGGGSNF-RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l-~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
.++.||+|+..|.++-+ +.-+.+.... ...+++++|+++......++|+++|+|
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~ 64 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQLGVD 64 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHTTCC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHhCCC
Confidence 45789999977752211 1112222221 136788767766544566789999997
No 31
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=82.92 E-value=2.2 Score=38.97 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=42.5
Q ss_pred ceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChh
Q 022631 70 YEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPN 149 (294)
Q Consensus 70 ~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~ 149 (294)
|--+...+.++.||+|+..|. ..-+..+.++..-....++++|+... .....++|+++|++-.+-
T Consensus 8 ~~~~~~~~~~~irvgiIG~G~-~~g~~~~~~l~~~~~~~~lvav~d~~-~~~~~~~a~~~~~~~~~~------------- 72 (340)
T 1zh8_A 8 HHHHHMKPLRKIRLGIVGCGI-AARELHLPALKNLSHLFEITAVTSRT-RSHAEEFAKMVGNPAVFD------------- 72 (340)
T ss_dssp --------CCCEEEEEECCSH-HHHHTHHHHHHTTTTTEEEEEEECSS-HHHHHHHHHHHSSCEEES-------------
T ss_pred ccccccCCCCceeEEEEecCH-HHHHHHHHHHHhCCCceEEEEEEcCC-HHHHHHHHHHhCCCcccC-------------
Confidence 444445566678888884441 12222333333211246787766533 223557788888854331
Q ss_pred HHHHHHHhcCCcEEEEecc
Q 022631 150 DLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 150 ~l~~~L~~~~~DliV~agy 168 (294)
++.+.|...++|+++++.-
T Consensus 73 ~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 73 SYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp CHHHHHHSSCCSEEEECCC
T ss_pred CHHHHhcCCCCCEEEEeCC
Confidence 2334566668899888753
No 32
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=81.35 E-value=1.2 Score=42.26 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=28.9
Q ss_pred CceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 79 KKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
++.||+|+..|.++-+. .-+.+.... ..++++++|+++......++|+++|+|
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~g~~ 89 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGRELGLD 89 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHHTCC
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHcCCC
Confidence 46788888555422222 222222222 136787756665444456788899987
No 33
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=81.17 E-value=1.7 Score=40.56 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=40.6
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..|. ..-...+.++... ...++++|+... .....++|+++|++++. ++.+.|+..
T Consensus 1 ~~~rigiiG~G~-~~~~~~~~~l~~~-~~~~l~av~d~~-~~~~~~~a~~~g~~~~~--------------~~~ell~~~ 63 (387)
T 3moi_A 1 MKIRFGICGLGF-AGSVLMAPAMRHH-PDAQIVAACDPN-EDVRERFGKEYGIPVFA--------------TLAEMMQHV 63 (387)
T ss_dssp CCEEEEEECCSH-HHHTTHHHHHHHC-TTEEEEEEECSC-HHHHHHHHHHHTCCEES--------------SHHHHHHHS
T ss_pred CceEEEEEeCCH-HHHHHHHHHHHhC-CCeEEEEEEeCC-HHHHHHHHHHcCCCeEC--------------CHHHHHcCC
Confidence 357888884440 2222233333321 246787776533 22345678888998541 233455566
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 64 ~vD~V~i~tp 73 (387)
T 3moi_A 64 QMDAVYIASP 73 (387)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEEcCC
Confidence 7888887653
No 34
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=81.00 E-value=4.2 Score=37.02 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=41.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.||+|+.. |.--+..+..+.......++++|+. +......++++++|++...+. ++.+.++..+
T Consensus 2 ~~rigiIG~--G~~g~~~~~~l~~~~~~~~l~av~d-~~~~~~~~~~~~~g~~~~~~~------------~~~~ll~~~~ 66 (344)
T 3mz0_A 2 SLRIGVIGT--GAIGKEHINRITNKLSGAEIVAVTD-VNQEAAQKVVEQYQLNATVYP------------NDDSLLADEN 66 (344)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHTCSSEEEEEEEC-SSHHHHHHHHHHTTCCCEEES------------SHHHHHHCTT
T ss_pred eEEEEEECc--cHHHHHHHHHHHhhCCCcEEEEEEc-CCHHHHHHHHHHhCCCCeeeC------------CHHHHhcCCC
Confidence 578888844 4333344455442222567777654 333345678888997433332 2234455567
Q ss_pred CcEEEEecc
Q 022631 160 VDFILLAGY 168 (294)
Q Consensus 160 ~DliV~agy 168 (294)
+|+++++.-
T Consensus 67 ~D~V~i~tp 75 (344)
T 3mz0_A 67 VDAVLVTSW 75 (344)
T ss_dssp CCEEEECSC
T ss_pred CCEEEECCC
Confidence 888887653
No 35
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=78.79 E-value=6.8 Score=35.84 Aligned_cols=73 Identities=16% Similarity=0.214 Sum_probs=41.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh--
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE-- 157 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~-- 157 (294)
+.||+|+.+| ..-+.++..+.......++++|+...++....++|+++|++... ..+.+.++.
T Consensus 4 ~irVaIIG~G--~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-------------~~~e~ll~~~~ 68 (312)
T 1nvm_B 4 KLKVAIIGSG--NIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------------AGVEGLIKLPE 68 (312)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------------SHHHHHHHSGG
T ss_pred CCEEEEEcCc--HHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-------------CCHHHHHhccC
Confidence 5788888544 33334444432212246787777655554367889999987531 122233343
Q ss_pred -cCCcEEEEec
Q 022631 158 -VNVDFILLAG 167 (294)
Q Consensus 158 -~~~DliV~ag 167 (294)
.++|+++.+.
T Consensus 69 ~~~iDvV~~at 79 (312)
T 1nvm_B 69 FADIDFVFDAT 79 (312)
T ss_dssp GGGEEEEEECS
T ss_pred CCCCcEEEECC
Confidence 4688888763
No 36
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=78.74 E-value=7.1 Score=35.42 Aligned_cols=57 Identities=14% Similarity=0.002 Sum_probs=33.7
Q ss_pred CCCCceeEEEEEeCCchHH---HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCC
Q 022631 76 SGIKKKNLAVFVSGGGSNF---RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 76 ~~~~~~rIaVl~SG~gs~l---~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~ 138 (294)
+...++||.++..+++... ..|.+++.+. .++|..+ +.. ...+...+.|++++.++.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~--GheV~v~-~~~---~~~~~~~~~g~~~~~~~~ 75 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAA--GHEVTFA-TGE---GFAGTLRKLGFEPVATGM 75 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEEE-ECG---GGHHHHHHTTCEEEECCC
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHC--CCEEEEE-ccH---HHHHHHHhcCCceeecCc
Confidence 3444678887766654433 3556665543 3566544 432 235677888999988763
No 37
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=78.59 E-value=3.5 Score=37.35 Aligned_cols=73 Identities=14% Similarity=0.088 Sum_probs=42.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcC-CCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAG-SVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~-~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+.||+|+.. |.--+..+.++..- ....++++|... ......++|+++|+|...- ++.+.|...
T Consensus 2 ~~rigiiG~--G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~~~~~~~~~~-------------~~~~ll~~~ 65 (334)
T 3ohs_X 2 ALRWGIVSV--GLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQKHDIPKAYG-------------SYEELAKDP 65 (334)
T ss_dssp CEEEEEECC--SHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHHHHTCSCEES-------------SHHHHHHCT
T ss_pred ccEEEEECc--hHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHHHcCCCcccC-------------CHHHHhcCC
Confidence 578888844 44334444444322 123578777653 3234567888999984331 233455667
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 66 ~vD~V~i~tp 75 (334)
T 3ohs_X 66 NVEVAYVGTQ 75 (334)
T ss_dssp TCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8899888753
No 38
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=78.49 E-value=3.7 Score=37.49 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=38.9
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..|. --...+..+.......++++|+.. ......++++++|++++ . ++.+.|+..
T Consensus 12 ~~~rvgiiG~G~--~g~~~~~~l~~~~~~~~lvav~d~-~~~~~~~~~~~~~~~~~--~------------~~~~ll~~~ 74 (354)
T 3q2i_A 12 RKIRFALVGCGR--IANNHFGALEKHADRAELIDVCDI-DPAALKAAVERTGARGH--A------------SLTDMLAQT 74 (354)
T ss_dssp SCEEEEEECCST--THHHHHHHHHHTTTTEEEEEEECS-SHHHHHHHHHHHCCEEE--S------------CHHHHHHHC
T ss_pred CcceEEEEcCcH--HHHHHHHHHHhCCCCeEEEEEEcC-CHHHHHHHHHHcCCcee--C------------CHHHHhcCC
Confidence 467888885552 222333433332124677776543 32234567777887443 1 122344556
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 75 ~~D~V~i~tp 84 (354)
T 3q2i_A 75 DADIVILTTP 84 (354)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 7777777653
No 39
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=77.44 E-value=8.7 Score=36.47 Aligned_cols=85 Identities=7% Similarity=0.010 Sum_probs=52.1
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCC-----ChhHHHHH
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGL-----SPNDLVAA 154 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~-----~d~~l~~~ 154 (294)
.+||+||.| +||--..-++-+... -.++++++.+++.-.-..+.|++++..++.+.+.......+ -.+.+.+.
T Consensus 3 ~k~i~ILGs-TGSIG~~tldVi~~~-~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~el 80 (376)
T 3a06_A 3 ERTLVILGA-TGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEEM 80 (376)
T ss_dssp CEEEEEETT-TSHHHHHHHHHHHHS-CSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHHHH
T ss_pred cceEEEECC-CCHHHHHHHHHHHhC-CCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHHHH
Confidence 378999943 355444444444443 35789999886544446788999998887664322110011 12456667
Q ss_pred HHhcCCcEEEEe
Q 022631 155 LSEVNVDFILLA 166 (294)
Q Consensus 155 L~~~~~DliV~a 166 (294)
+...++|+++.+
T Consensus 81 ~~~~~~D~Vv~A 92 (376)
T 3a06_A 81 LEALKPDITMVA 92 (376)
T ss_dssp HHHHCCSEEEEC
T ss_pred hcCCCCCEEEEE
Confidence 766789998876
No 40
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=76.16 E-value=1.3 Score=41.66 Aligned_cols=53 Identities=17% Similarity=0.116 Sum_probs=30.9
Q ss_pred CCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEE
Q 022631 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVI 134 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~ 134 (294)
..+.||+|+..|-|.. -+.+...-.-.+++++|+...++ ...++|+++|+|++
T Consensus 5 ~~~~rv~VvG~G~g~~---h~~a~~~~~~~~elvav~~~~~~-~a~~~a~~~gv~~~ 57 (372)
T 4gmf_A 5 SPKQRVLIVGAKFGEM---YLNAFMQPPEGLELVGLLAQGSA-RSRELAHAFGIPLY 57 (372)
T ss_dssp --CEEEEEECSTTTHH---HHHTTSSCCTTEEEEEEECCSSH-HHHHHHHHTTCCEE
T ss_pred CCCCEEEEEehHHHHH---HHHHHHhCCCCeEEEEEECCCHH-HHHHHHHHhCCCEE
Confidence 4478888885543321 12233222114688888764433 46789999999965
No 41
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=75.65 E-value=2.3 Score=38.69 Aligned_cols=46 Identities=15% Similarity=0.048 Sum_probs=27.5
Q ss_pred ceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEec
Q 022631 108 GDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 108 ~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ag 167 (294)
.+|++|.. +......++|+++|+|..+- +.-+.|+.-++|+|+++.
T Consensus 38 ~~l~av~d-~~~~~a~~~a~~~g~~~~~~-------------d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 38 PDLNVLCG-RDAEAVRAAAGKLGWSTTET-------------DWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp EEEEEEEC-SSHHHHHHHHHHHTCSEEES-------------CHHHHTTCTTCSEEEECS
T ss_pred ceEEEEEc-CCHHHHHHHHHHcCCCcccC-------------CHHHHhcCCCCCEEEEeC
Confidence 47777654 33334567899999986542 122345555677766653
No 42
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=75.12 E-value=9.8 Score=34.88 Aligned_cols=75 Identities=9% Similarity=0.025 Sum_probs=41.4
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+ |.|.--+..+.++.......++++|+... .....++|+++|++...+. ++.+.|+..
T Consensus 22 ~~~rvgiI--G~G~~g~~~~~~l~~~~~~~~lvav~d~~-~~~~~~~a~~~g~~~~~~~------------~~~~ll~~~ 86 (357)
T 3ec7_A 22 MTLKAGIV--GIGMIGSDHLRRLANTVSGVEVVAVCDIV-AGRAQAALDKYAIEAKDYN------------DYHDLINDK 86 (357)
T ss_dssp CCEEEEEE--CCSHHHHHHHHHHHHTCTTEEEEEEECSS-TTHHHHHHHHHTCCCEEES------------SHHHHHHCT
T ss_pred CeeeEEEE--CCcHHHHHHHHHHHhhCCCcEEEEEEeCC-HHHHHHHHHHhCCCCeeeC------------CHHHHhcCC
Confidence 35677777 44443344444444222246777766543 3345678888886433322 223445556
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 87 ~~D~V~i~tp 96 (357)
T 3ec7_A 87 DVEVVIITAS 96 (357)
T ss_dssp TCCEEEECSC
T ss_pred CCCEEEEcCC
Confidence 7888887653
No 43
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=74.62 E-value=4.5 Score=36.60 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=37.3
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..|. --...+.++... ...++++|....++ ...++|+++|++...- +..+.+...
T Consensus 4 ~~~rigiiG~G~--ig~~~~~~l~~~-~~~~~~av~d~~~~-~~~~~a~~~~~~~~~~-------------~~~~ll~~~ 66 (329)
T 3evn_A 4 SKVRYGVVSTAK--VAPRFIEGVRLA-GNGEVVAVSSRTLE-SAQAFANKYHLPKAYD-------------KLEDMLADE 66 (329)
T ss_dssp -CEEEEEEBCCT--THHHHHHHHHHH-CSEEEEEEECSCSS-TTCC---CCCCSCEES-------------CHHHHHTCT
T ss_pred CceEEEEEechH--HHHHHHHHHHhC-CCcEEEEEEcCCHH-HHHHHHHHcCCCcccC-------------CHHHHhcCC
Confidence 367888886652 222333333221 14678777654333 3456788888873321 123345556
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 67 ~~D~V~i~tp 76 (329)
T 3evn_A 67 SIDVIYVATI 76 (329)
T ss_dssp TCCEEEECSC
T ss_pred CCCEEEECCC
Confidence 7888877643
No 44
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=74.33 E-value=8.2 Score=34.78 Aligned_cols=76 Identities=9% Similarity=-0.054 Sum_probs=40.4
Q ss_pred CCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh
Q 022631 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE 157 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~ 157 (294)
.++.||+|+..| .--...+..+.......++++|+. +......++|+++|++... . +..+.++.
T Consensus 6 ~~~~~v~iiG~G--~ig~~~~~~l~~~~~~~~~vav~d-~~~~~~~~~a~~~g~~~~~-~------------~~~~~l~~ 69 (346)
T 3cea_A 6 RKPLRAAIIGLG--RLGERHARHLVNKIQGVKLVAACA-LDSNQLEWAKNELGVETTY-T------------NYKDMIDT 69 (346)
T ss_dssp CCCEEEEEECCS--TTHHHHHHHHHHTCSSEEEEEEEC-SCHHHHHHHHHTTCCSEEE-S------------CHHHHHTT
T ss_pred CCcceEEEEcCC--HHHHHHHHHHHhcCCCcEEEEEec-CCHHHHHHHHHHhCCCccc-C------------CHHHHhcC
Confidence 446788888544 322333444431222467776654 3322345678888886432 1 12234455
Q ss_pred cCCcEEEEeccc
Q 022631 158 VNVDFILLAGYL 169 (294)
Q Consensus 158 ~~~DliV~agy~ 169 (294)
.++|+++++.-.
T Consensus 70 ~~~D~V~i~tp~ 81 (346)
T 3cea_A 70 ENIDAIFIVAPT 81 (346)
T ss_dssp SCCSEEEECSCG
T ss_pred CCCCEEEEeCCh
Confidence 578888877543
No 45
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=72.94 E-value=14 Score=34.47 Aligned_cols=38 Identities=26% Similarity=0.331 Sum_probs=29.0
Q ss_pred CCcEEEEecc----------------ccccChhHHhcCCCCEEEEcCCCCCCCCCC
Q 022631 159 NVDFILLAGY----------------LKLIPMELIRAYPRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 159 ~~DliV~agy----------------~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~ 198 (294)
+.|+|..-.| .+.|..++++..+..++-+|| ||.+||.
T Consensus 247 ~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHc--LPa~Rg~ 300 (340)
T 4ep1_A 247 EADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHC--LPAHREE 300 (340)
T ss_dssp TCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCBTT
T ss_pred CCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECC--CCCCCCc
Confidence 5777776665 245788888888778999998 5888984
No 46
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=72.80 E-value=6.5 Score=35.64 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=38.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.||+|+..| .--...+..+... ...++++|+. +......++|+++|++++ . ++.+.++..+
T Consensus 4 ~~rvgiiG~G--~~g~~~~~~l~~~-~~~~l~av~d-~~~~~~~~~a~~~g~~~~--~------------~~~~~l~~~~ 65 (344)
T 3euw_A 4 TLRIALFGAG--RIGHVHAANIAAN-PDLELVVIAD-PFIEGAQRLAEANGAEAV--A------------SPDEVFARDD 65 (344)
T ss_dssp CEEEEEECCS--HHHHHHHHHHHHC-TTEEEEEEEC-SSHHHHHHHHHTTTCEEE--S------------SHHHHTTCSC
T ss_pred ceEEEEECCc--HHHHHHHHHHHhC-CCcEEEEEEC-CCHHHHHHHHHHcCCcee--C------------CHHHHhcCCC
Confidence 5788888444 3333444444332 2467777654 333334567888885543 1 1233455557
Q ss_pred CcEEEEecc
Q 022631 160 VDFILLAGY 168 (294)
Q Consensus 160 ~DliV~agy 168 (294)
+|+++++.-
T Consensus 66 ~D~V~i~tp 74 (344)
T 3euw_A 66 IDGIVIGSP 74 (344)
T ss_dssp CCEEEECSC
T ss_pred CCEEEEeCC
Confidence 777777653
No 47
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=72.38 E-value=4.5 Score=36.10 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=39.1
Q ss_pred CCceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHH
Q 022631 78 IKKKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALS 156 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~ 156 (294)
.++.||+|+.. |.--.. .+..+.. ....++++|+.. ......++|+++|++. +. ++.+.++
T Consensus 4 M~~~~igiIG~--G~~g~~~~~~~l~~-~~~~~l~av~d~-~~~~~~~~a~~~~~~~--~~------------~~~~ll~ 65 (308)
T 3uuw_A 4 MKNIKMGMIGL--GSIAQKAYLPILTK-SERFEFVGAFTP-NKVKREKICSDYRIMP--FD------------SIESLAK 65 (308)
T ss_dssp -CCCEEEEECC--SHHHHHHTHHHHTS-CSSSEEEEEECS-CHHHHHHHHHHHTCCB--CS------------CHHHHHT
T ss_pred cccCcEEEEec--CHHHHHHHHHHHHh-CCCeEEEEEECC-CHHHHHHHHHHcCCCC--cC------------CHHHHHh
Confidence 34678888844 433332 3333332 224677776653 3333557788888885 21 1122333
Q ss_pred hcCCcEEEEecccc
Q 022631 157 EVNVDFILLAGYLK 170 (294)
Q Consensus 157 ~~~~DliV~agy~~ 170 (294)
++|+++++.-..
T Consensus 66 --~~D~V~i~tp~~ 77 (308)
T 3uuw_A 66 --KCDCIFLHSSTE 77 (308)
T ss_dssp --TCSEEEECCCGG
T ss_pred --cCCEEEEeCCcH
Confidence 788888765433
No 48
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=72.04 E-value=6.7 Score=35.58 Aligned_cols=73 Identities=11% Similarity=-0.045 Sum_probs=41.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.||+|+.. |.--...+..+.. ....++++|.. +......++|++.|++...- ++.+.+...+
T Consensus 2 ~~rvgiIG~--G~~g~~~~~~l~~-~~~~~l~av~d-~~~~~~~~~~~~~~~~~~~~-------------~~~~ll~~~~ 64 (344)
T 3ezy_A 2 SLRIGVIGL--GRIGTIHAENLKM-IDDAILYAISD-VREDRLREMKEKLGVEKAYK-------------DPHELIEDPN 64 (344)
T ss_dssp CEEEEEECC--SHHHHHHHHHGGG-STTEEEEEEEC-SCHHHHHHHHHHHTCSEEES-------------SHHHHHHCTT
T ss_pred eeEEEEEcC--CHHHHHHHHHHHh-CCCcEEEEEEC-CCHHHHHHHHHHhCCCceeC-------------CHHHHhcCCC
Confidence 578888844 4333334444433 22467776654 33334457788889874431 2234455567
Q ss_pred CcEEEEeccc
Q 022631 160 VDFILLAGYL 169 (294)
Q Consensus 160 ~DliV~agy~ 169 (294)
+|+++++.-.
T Consensus 65 ~D~V~i~tp~ 74 (344)
T 3ezy_A 65 VDAVLVCSST 74 (344)
T ss_dssp CCEEEECSCG
T ss_pred CCEEEEcCCC
Confidence 8888877543
No 49
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=71.93 E-value=11 Score=34.65 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=30.0
Q ss_pred CCcEEEEecc-----------------ccccChhHHhcCCCCEEEEcCCCCCCCCCC
Q 022631 159 NVDFILLAGY-----------------LKLIPMELIRAYPRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 159 ~~DliV~agy-----------------~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~ 198 (294)
+.|++..-.| .+.|..++++..+-.++-+|| ||.+||-
T Consensus 217 ~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg~ 271 (307)
T 2i6u_A 217 GADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRGD 271 (307)
T ss_dssp TCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBTT
T ss_pred CCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECC--CCCCCCc
Confidence 6788888666 355788888888778999996 6899984
No 50
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=71.30 E-value=17 Score=33.76 Aligned_cols=26 Identities=27% Similarity=0.419 Sum_probs=21.1
Q ss_pred ccChhHHhcCCCCEEEEcCCCCCCCCCC
Q 022631 171 LIPMELIRAYPRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 171 ilp~~~l~~~~~g~iNiHPSlLP~yRG~ 198 (294)
.|..++++..+..++-+|| ||.+||.
T Consensus 254 ~vt~ell~~ak~dai~mHc--lPa~Rg~ 279 (323)
T 3gd5_A 254 QINAALLNCAAAEAIVLHC--LPAHRGE 279 (323)
T ss_dssp CBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred CCCHHHHhhcCCCcEEECC--CCCCCCc
Confidence 5788888887778999998 4888984
No 51
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=69.75 E-value=20 Score=31.72 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=57.4
Q ss_pred CceeEEEEEeC-----Cc--hHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 79 KKKNLAVFVSG-----GG--SNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 79 ~~~rIaVl~SG-----~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
+++||+++... +| ..+..+.+.+ . .++|.++..+........+....+++++.++.....+....-..+
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~---g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D---PESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAM 78 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C---GGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHH
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c---CCeEEEEECCCCccchhhhccccceEEEEccccccccchhhHHHH
Confidence 36788888751 22 2233333333 2 356765555443322245666788988887653221111113467
Q ss_pred HHHHHhcCCcEEEEeccccc-cChhHHhcCCCC-E-EEEcCCC
Q 022631 152 VAALSEVNVDFILLAGYLKL-IPMELIRAYPRS-I-VNIHPSL 191 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~~i-lp~~~l~~~~~g-~-iNiHPSl 191 (294)
.+.+++.++|++++.+.... +-..++...... + +.+|...
T Consensus 79 ~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~ 121 (394)
T 3okp_A 79 AEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHE 121 (394)
T ss_dssp HHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTH
T ss_pred HHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccch
Confidence 78888999999997543222 222233333332 4 4778653
No 52
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=69.69 E-value=9.8 Score=34.64 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=36.6
Q ss_pred CceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCC---CEEEcCCCCCCCCCCChhHHHHH
Q 022631 79 KKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSI---PVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gI---P~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
++.||+|+..| .--+ ..+..+.. ....++++|+... ...++|+++++ +++ . ++.+.
T Consensus 1 M~~rvgiiG~G--~~g~~~~~~~l~~-~~~~~l~av~d~~---~~~~~a~~~~~~~~~~~--~------------~~~~l 60 (349)
T 3i23_A 1 MTVKMGFIGFG--KSANRYHLPYVMI-RETLEVKTIFDLH---VNEKAAAPFKEKGVNFT--A------------DLNEL 60 (349)
T ss_dssp CCEEEEEECCS--HHHHHTTHHHHTT-CTTEEEEEEECTT---CCHHHHHHHHTTTCEEE--S------------CTHHH
T ss_pred CeeEEEEEccC--HHHHHHHHHHHhh-CCCeEEEEEECCC---HHHHHHHhhCCCCCeEE--C------------CHHHH
Confidence 36788888544 3222 12222322 2257888887644 35677777544 332 1 11234
Q ss_pred HHhcCCcEEEEec
Q 022631 155 LSEVNVDFILLAG 167 (294)
Q Consensus 155 L~~~~~DliV~ag 167 (294)
|..-++|+++++.
T Consensus 61 l~~~~~D~V~i~t 73 (349)
T 3i23_A 61 LTDPEIELITICT 73 (349)
T ss_dssp HSCTTCCEEEECS
T ss_pred hcCCCCCEEEEeC
Confidence 4455678777764
No 53
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=68.92 E-value=6.1 Score=36.17 Aligned_cols=72 Identities=13% Similarity=0.032 Sum_probs=40.1
Q ss_pred CceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh
Q 022631 79 KKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE 157 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~ 157 (294)
++.||+|+ |.|.--+ ..+.++... ...++++|+... .....++|+++|++.+. ++.+.|+.
T Consensus 26 ~~~rigiI--G~G~~g~~~~~~~l~~~-~~~~l~av~d~~-~~~~~~~a~~~g~~~~~--------------~~~~ll~~ 87 (350)
T 3rc1_A 26 NPIRVGVI--GCADIAWRRALPALEAE-PLTEVTAIASRR-WDRAKRFTERFGGEPVE--------------GYPALLER 87 (350)
T ss_dssp CCEEEEEE--SCCHHHHHTHHHHHHHC-TTEEEEEEEESS-HHHHHHHHHHHCSEEEE--------------SHHHHHTC
T ss_pred CceEEEEE--cCcHHHHHHHHHHHHhC-CCeEEEEEEcCC-HHHHHHHHHHcCCCCcC--------------CHHHHhcC
Confidence 35677777 4443333 344444332 246787776533 23355788888998752 12234455
Q ss_pred cCCcEEEEecc
Q 022631 158 VNVDFILLAGY 168 (294)
Q Consensus 158 ~~~DliV~agy 168 (294)
.++|+++++.-
T Consensus 88 ~~~D~V~i~tp 98 (350)
T 3rc1_A 88 DDVDAVYVPLP 98 (350)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57787777643
No 54
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=68.48 E-value=19 Score=33.49 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=57.7
Q ss_pred CCceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCC-CEEEcCCCCCCCCCCC------
Q 022631 78 IKKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSI-PVILFPKTKDEPNGLS------ 147 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gI-P~~~~~~~~~~~~~~~------ 147 (294)
.+++||.++ .|.-+. +..|+.+++......++..|+|.....-..+..+.+|| |-+.++--.. .....
T Consensus 25 m~~~kI~~v-~Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l~v~~~-~~~~~~~~~~~ 102 (403)
T 3ot5_A 25 MAKIKVMSI-FGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDLDIMKK-GQTLAEITSRV 102 (403)
T ss_dssp -CCEEEEEE-ECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEECCCCC--CCCHHHHHHHH
T ss_pred cccceEEEE-EecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCcccccCCC-CCCHHHHHHHH
Confidence 334577766 454333 56667776643113677777775431123445578888 3233321100 00111
Q ss_pred hhHHHHHHHhcCCcEEEEeccc-cccChhHHh-cCCCCEEEEcCCC
Q 022631 148 PNDLVAALSEVNVDFILLAGYL-KLIPMELIR-AYPRSIVNIHPSL 191 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy~-~ilp~~~l~-~~~~g~iNiHPSl 191 (294)
-..+.+.|++++||++++.|.. ..++..+.. ...-.++.++.++
T Consensus 103 ~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl 148 (403)
T 3ot5_A 103 MNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL 148 (403)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred HHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 1245677889999999998742 233322222 2233578888776
No 55
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=68.38 E-value=12 Score=34.47 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.9
Q ss_pred CCcEEEEecc-----------------ccccChhHHhcCCCCEEEEcCCCCCCCCCC
Q 022631 159 NVDFILLAGY-----------------LKLIPMELIRAYPRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 159 ~~DliV~agy-----------------~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~ 198 (294)
+.|++..-.| .+.|..++++..+-.++-+|| ||.+||-
T Consensus 223 ~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~--lP~~Rg~ 277 (315)
T 1pvv_A 223 DADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC--LPAHRGE 277 (315)
T ss_dssp TCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred CCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECC--CCCCCCC
Confidence 6788887665 355788888888778999996 6899984
No 56
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=68.34 E-value=12 Score=33.66 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=39.3
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCC-CEEEcCCCCCCCCCCChhHHHHHHHh
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSI-PVILFPKTKDEPNGLSPNDLVAALSE 157 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gI-P~~~~~~~~~~~~~~~d~~l~~~L~~ 157 (294)
++.||+|+..|..... ..+.++... ..++++|....++ ...++|++++. +++ .+..+.|+.
T Consensus 3 ~~~rvgiiG~G~~~~~-~~~~~l~~~--~~~lvav~d~~~~-~~~~~a~~~~~~~~~--------------~~~~~ll~~ 64 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIY-DMCQQLIDA--GAELAGVFESDSD-NRAKFTSLFPSVPFA--------------ASAEQLITD 64 (336)
T ss_dssp -CCEEEEECCSSTHHH-HHHHHHHHT--TCEEEEEECSCTT-SCHHHHHHSTTCCBC--------------SCHHHHHTC
T ss_pred CccEEEEECCChHHHH-HhhhhhcCC--CcEEEEEeCCCHH-HHHHHHHhcCCCccc--------------CCHHHHhhC
Confidence 3678999966644321 233333332 4678777664333 45677888743 321 112344555
Q ss_pred cCCcEEEEec
Q 022631 158 VNVDFILLAG 167 (294)
Q Consensus 158 ~~~DliV~ag 167 (294)
.++|+++++.
T Consensus 65 ~~~D~V~i~t 74 (336)
T 2p2s_A 65 ASIDLIACAV 74 (336)
T ss_dssp TTCCEEEECS
T ss_pred CCCCEEEEeC
Confidence 6788887765
No 57
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=67.51 E-value=13 Score=34.52 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=29.6
Q ss_pred CCcEEEEecc-----------------ccccChhHHhcC-CCCEEEEcCCCCCCCCCC
Q 022631 159 NVDFILLAGY-----------------LKLIPMELIRAY-PRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 159 ~~DliV~agy-----------------~~ilp~~~l~~~-~~g~iNiHPSlLP~yRG~ 198 (294)
+.|++..-.| .+.|.+++++.. +-.++-+|| ||.+||-
T Consensus 236 ~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 236 GADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp TCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred cCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECC--CCCCCCc
Confidence 6788877555 355788888888 778999996 6899984
No 58
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=67.21 E-value=8.4 Score=34.99 Aligned_cols=52 Identities=13% Similarity=-0.001 Sum_probs=25.3
Q ss_pred ceeEEEEEeCCchHHHHHHHH-HHcCCCCceEEEEecCCCCCccHHHHHhCCCCEE
Q 022631 80 KKNLAVFVSGGGSNFRSIHAA-CLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVI 134 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~-~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~ 134 (294)
+.||+|+..| .--+..+.. ........++++|+...++. ....++..+++++
T Consensus 2 ~~rvgiiG~G--~~g~~~~~~~~~~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~ 54 (345)
T 3f4l_A 2 VINCAFIGFG--KSTTRYHLPYVLNRKDSWHVAHIFRRHAKP-EEQAPIYSHIHFT 54 (345)
T ss_dssp CEEEEEECCS--HHHHHHTHHHHTTCTTTEEEEEEECSSCCG-GGGSGGGTTCEEE
T ss_pred ceEEEEEecC--HHHHHHHHHHHHhcCCCeEEEEEEcCCHhH-HHHHHhcCCCceE
Confidence 5788888444 322222222 22222357888887755442 2223333455543
No 59
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=66.78 E-value=12 Score=33.65 Aligned_cols=71 Identities=8% Similarity=0.060 Sum_probs=40.2
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..| .--+..+..+... ...++++|.. +......++|++.|++ + . ++.+.++..
T Consensus 2 m~~~vgiiG~G--~~g~~~~~~l~~~-~~~~l~av~d-~~~~~~~~~~~~~~~~-~--~------------~~~~~l~~~ 62 (331)
T 4hkt_A 2 MTVRFGLLGAG--RIGKVHAKAVSGN-ADARLVAVAD-AFPAAAEAIAGAYGCE-V--R------------TIDAIEAAA 62 (331)
T ss_dssp -CEEEEEECCS--HHHHHHHHHHHHC-TTEEEEEEEC-SSHHHHHHHHHHTTCE-E--C------------CHHHHHHCT
T ss_pred CceEEEEECCC--HHHHHHHHHHhhC-CCcEEEEEEC-CCHHHHHHHHHHhCCC-c--C------------CHHHHhcCC
Confidence 36788988544 3333344444331 2467776654 3333456788889988 2 1 122345556
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 63 ~~D~V~i~tp 72 (331)
T 4hkt_A 63 DIDAVVICTP 72 (331)
T ss_dssp TCCEEEECSC
T ss_pred CCCEEEEeCC
Confidence 7888887654
No 60
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=65.85 E-value=22 Score=32.23 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=32.5
Q ss_pred CCCceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCC
Q 022631 77 GIKKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~ 138 (294)
..+++||+++..++++. +..|..++... .++|. |++. ...+.....|++++.++.
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~--GheV~-v~~~----~~~~~~~~~G~~~~~~~~ 74 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTA--GHDVL-IAVA----EHADRAAAAGLEVVDVAP 74 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEE-EEES----SCHHHHHTTTCEEEESST
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHC--CCEEE-Eecc----chHHHHHhCCCeeEecCC
Confidence 33457888886554433 35566665543 24665 4443 245667789999988763
No 61
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=65.68 E-value=9.7 Score=35.01 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=41.4
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..|.... ..++.....+ ..++++|+...+ ....++|+++|++..+- ++.+.|..-
T Consensus 25 ~~irvgiiG~G~~~~-~~~~~~~~~~--~~~lvav~d~~~-~~a~~~a~~~~~~~~~~-------------~~~~ll~~~ 87 (361)
T 3u3x_A 25 DELRFAAVGLNHNHI-YGQVNCLLRA--GARLAGFHEKDD-ALAAEFSAVYADARRIA-------------TAEEILEDE 87 (361)
T ss_dssp -CCEEEEECCCSTTH-HHHHHHHHHT--TCEEEEEECSCH-HHHHHHHHHSSSCCEES-------------CHHHHHTCT
T ss_pred cCcEEEEECcCHHHH-HHHHHHhhcC--CcEEEEEEcCCH-HHHHHHHHHcCCCcccC-------------CHHHHhcCC
Confidence 357888887664332 2223333333 468888775432 23467888888543321 233455666
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
++|+++++.
T Consensus 88 ~vD~V~I~t 96 (361)
T 3u3x_A 88 NIGLIVSAA 96 (361)
T ss_dssp TCCEEEECC
T ss_pred CCCEEEEeC
Confidence 789888765
No 62
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=65.59 E-value=28 Score=31.51 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=56.9
Q ss_pred CCceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCC--------CC
Q 022631 78 IKKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPN--------GL 146 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~--------~~ 146 (294)
.+++||.++..|+.+. +..|..++.+. .++|..+ |.. ...+...+.|++++.++....... ..
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~--Gh~V~v~-~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRR--GHRVSYV-TAG---GFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDL 91 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEE-ECG---GGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSS
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHC--CCEEEEE-eCH---HHHHHHHhcCCEEEeccccccccccchhhccccH
Confidence 3467888887664433 34555555443 3466544 422 245667788999888763211000 00
Q ss_pred --------------ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCC
Q 022631 147 --------------SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 147 --------------~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
.-.++.+.+++++||+||+-++.-....-+-+...-.++.+-+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 92 GVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 013456777889999999653433222222223333455544444
No 63
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=65.17 E-value=21 Score=32.01 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=49.2
Q ss_pred CCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEecc
Q 022631 89 GGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 89 G~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy 168 (294)
|.|+.++.+..+- .+. ++..+..+.+. .+.++.|.+++.++.. ..+++.+.+++.++|++|+-+|
T Consensus 14 G~GHvmRcl~LA~---~l~-~v~F~~~~~~~----~~~~~~g~~v~~l~~~-------d~~~~~~~l~~~~~d~lIvD~Y 78 (282)
T 3hbm_A 14 GFGHIKRDLVLAK---QYS-DVSFACLPLEG----SLIDEIPYPVYELSSE-------SIYELINLIKEEKFELLIIDHY 78 (282)
T ss_dssp BSHHHHHHHHHHT---TCS-SEEEEECCCTT----CCGGGCCSCEEECSSS-------CHHHHHHHHHHHTCSEEEEECT
T ss_pred cccHHHHHHHHHH---HHH-hCEEEEecCcH----hHHHHCCCeEEEcCcc-------CHHHHHHHHHhCCCCEEEEECC
Confidence 4678888775542 333 56655433222 2344559999887631 2467889999999999999998
Q ss_pred ccccChhHHhcC
Q 022631 169 LKLIPMELIRAY 180 (294)
Q Consensus 169 ~~ilp~~~l~~~ 180 (294)
. ++.+..+..
T Consensus 79 ~--~~~~~~~~l 88 (282)
T 3hbm_A 79 G--ISVDDEKLI 88 (282)
T ss_dssp T--CCHHHHHHH
T ss_pred C--CCHHHHHHH
Confidence 4 566665543
No 64
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=65.16 E-value=12 Score=33.76 Aligned_cols=75 Identities=13% Similarity=0.191 Sum_probs=42.2
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+..| .--...+..+..- ...++++|+. +......++|+++|+|... .++.+.+...
T Consensus 4 ~~~~igiiG~G--~~g~~~~~~l~~~-~~~~l~av~d-~~~~~~~~~~~~~~~~~~~-------------~~~~~ll~~~ 66 (330)
T 3e9m_A 4 DKIRYGIMSTA--QIVPRFVAGLRES-AQAEVRGIAS-RRLENAQKMAKELAIPVAY-------------GSYEELCKDE 66 (330)
T ss_dssp CCEEEEECSCC--TTHHHHHHHHHHS-SSEEEEEEBC-SSSHHHHHHHHHTTCCCCB-------------SSHHHHHHCT
T ss_pred CeEEEEEECch--HHHHHHHHHHHhC-CCcEEEEEEe-CCHHHHHHHHHHcCCCcee-------------CCHHHHhcCC
Confidence 35788888554 3333344444331 2457776654 3333456788888986321 1233455566
Q ss_pred CCcEEEEecccc
Q 022631 159 NVDFILLAGYLK 170 (294)
Q Consensus 159 ~~DliV~agy~~ 170 (294)
++|+++++.-..
T Consensus 67 ~~D~V~i~tp~~ 78 (330)
T 3e9m_A 67 TIDIIYIPTYNQ 78 (330)
T ss_dssp TCSEEEECCCGG
T ss_pred CCCEEEEcCCCH
Confidence 888888775433
No 65
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=64.64 E-value=11 Score=34.16 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=41.0
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC-C--ccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD-C--GGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~-~--~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
++.||+|+..| .-....+.++ ....++++|....++ . ...+.++++|++...+. ++-+.|
T Consensus 1 M~~rvgiiG~G--~~~~~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ll 63 (337)
T 3ip3_A 1 MSLKICVIGSS--GHFRYALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYN------------NWWEML 63 (337)
T ss_dssp -CEEEEEECSS--SCHHHHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECS------------SHHHHH
T ss_pred CceEEEEEccc--hhHHHHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccC------------CHHHHh
Confidence 36789998554 2223333333 225788888875442 1 23455667788433332 233455
Q ss_pred HhcCCcEEEEec
Q 022631 156 SEVNVDFILLAG 167 (294)
Q Consensus 156 ~~~~~DliV~ag 167 (294)
...++|+++++.
T Consensus 64 ~~~~vD~V~I~t 75 (337)
T 3ip3_A 64 EKEKPDILVINT 75 (337)
T ss_dssp HHHCCSEEEECS
T ss_pred cCCCCCEEEEeC
Confidence 667899998874
No 66
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=63.98 E-value=7.7 Score=33.58 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=43.4
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+..|++|+ |.|..-+++........ .+++++++-+.++.-. ..-.|+|+... +++.+.+++
T Consensus 79 ~~~rV~II--GaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g---~~i~gv~V~~~------------~dl~ell~~- 139 (211)
T 2dt5_A 79 RKWGLCIV--GMGRLGSALADYPGFGE-SFELRGFFDVDPEKVG---RPVRGGVIEHV------------DLLPQRVPG- 139 (211)
T ss_dssp SCEEEEEE--CCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTT---CEETTEEEEEG------------GGHHHHSTT-
T ss_pred CCCEEEEE--CccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHh---hhhcCCeeecH------------HhHHHHHHc-
Confidence 35677666 66665566655422334 6789999876554321 12247787642 246677788
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
++|.++++-
T Consensus 140 ~ID~ViIA~ 148 (211)
T 2dt5_A 140 RIEIALLTV 148 (211)
T ss_dssp TCCEEEECS
T ss_pred CCCEEEEeC
Confidence 999998873
No 67
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=63.84 E-value=9.3 Score=32.35 Aligned_cols=58 Identities=16% Similarity=-0.031 Sum_probs=34.1
Q ss_pred CCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCCCEEEcCC
Q 022631 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gIP~~~~~~ 138 (294)
.++.|++|.+|||--..-.+...... ..++.++..+... ..+.++|++.|||++.++-
T Consensus 4 m~~~kv~v~~SGG~DS~~ll~ll~~~---g~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~ 65 (203)
T 3k32_A 4 MKLMDVHVLFSGGKDSSLSAVILKKL---GYNPHLITINFGVIPSYKLAEETAKILGFKHKVITL 65 (203)
T ss_dssp --CEEEEEECCCSHHHHHHHHHHHHT---TEEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEEC
T ss_pred ccCCeEEEEEECcHHHHHHHHHHHHc---CCCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEEC
Confidence 34579999999965222222111222 2467666555422 2356899999999887753
No 68
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=63.82 E-value=27 Score=30.82 Aligned_cols=84 Identities=18% Similarity=0.130 Sum_probs=47.9
Q ss_pred eeEEEEEeCCchHHH---HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCC-------C----
Q 022631 81 KNLAVFVSGGGSNFR---SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNG-------L---- 146 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~---~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~-------~---- 146 (294)
+||.++..|.|.... .|..++.+. .++|..+ +.... ...+...+.|++++.++........ .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~--G~~V~v~-~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWL-GTADR-MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIF 82 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEE-ECTTS-THHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHc--CCEEEEE-ecCCc-chhhhccccCCceEEecCCccCcCccHHHHHHHHHHH
Confidence 789888766554443 555665443 3566544 43322 1234556679998877543211100 0
Q ss_pred -ChhHHHHHHHhcCCcEEEEecc
Q 022631 147 -SPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 147 -~d~~l~~~L~~~~~DliV~agy 168 (294)
.-..+.+.+++.+||++++.+.
T Consensus 83 ~~~~~l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 83 NAWRQARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHHHhcCCCEEEEeCC
Confidence 0124566778889999998764
No 69
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=62.36 E-value=22 Score=27.44 Aligned_cols=64 Identities=14% Similarity=0.017 Sum_probs=35.3
Q ss_pred CCceeEEEEEeCCchHH---HHHHHHHHcCCCCceEEEEecCC-C------CC------------ccHHHHHhCCCCEEE
Q 022631 78 IKKKNLAVFVSGGGSNF---RSIHAACLAGSVYGDVVVLVTNK-P------DC------------GGAEYARDNSIPVIL 135 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l---~~ll~~~~~~~~~~eI~~Vvt~~-~------~~------------~~~~~A~~~gIP~~~ 135 (294)
.+++||.+++++|.|.- ..+-++.....++.+|.++-... . |+ .+.+.|.+.|+|+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTCEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHHhhhcCCcEEE
Confidence 45778888888877552 23333333334555665532211 1 10 134667778999998
Q ss_pred cCCCCC
Q 022631 136 FPKTKD 141 (294)
Q Consensus 136 ~~~~~~ 141 (294)
++...|
T Consensus 84 I~~~~Y 89 (108)
T 3nbm_A 84 TRGMEY 89 (108)
T ss_dssp CCHHHH
T ss_pred eCHHHh
Confidence 875443
No 70
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=62.21 E-value=37 Score=26.29 Aligned_cols=72 Identities=14% Similarity=0.155 Sum_probs=40.8
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.+|.|+ |.|..-..+...+... ..+++++-.++ ...+.+++.|++++..+. .++++++...-.+
T Consensus 7 ~~~viIi--G~G~~G~~la~~L~~~--g~~v~vid~~~---~~~~~~~~~g~~~i~gd~--------~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLV--GYGRVGSLLGEKLLAS--DIPLVVIETSR---TRVDELRERGVRAVLGNA--------ANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEE--CCSHHHHHHHHHHHHT--TCCEEEEESCH---HHHHHHHHTTCEEEESCT--------TSHHHHHHTTGGG
T ss_pred CCCEEEE--CcCHHHHHHHHHHHHC--CCCEEEEECCH---HHHHHHHHcCCCEEECCC--------CCHHHHHhcCccc
Confidence 4567776 5555555555555433 24565553332 233556678999876543 2355555544457
Q ss_pred CcEEEEe
Q 022631 160 VDFILLA 166 (294)
Q Consensus 160 ~DliV~a 166 (294)
+|++|++
T Consensus 72 ad~vi~~ 78 (140)
T 3fwz_A 72 AKWLILT 78 (140)
T ss_dssp CSEEEEC
T ss_pred CCEEEEE
Confidence 8888865
No 71
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=60.78 E-value=15 Score=30.66 Aligned_cols=56 Identities=16% Similarity=0.062 Sum_probs=33.3
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC------ccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC------GGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~------~~~~~A~~~gIP~~~~~~ 138 (294)
+.|++|.+|||--..-.+......+ .++.+|..+.... .+.++|++.|||++.++-
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~~~---~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~ 64 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKEF---EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDM 64 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHC---SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHcC---CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeC
Confidence 4689999999653322222222233 3566655543321 245789999999887753
No 72
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=58.64 E-value=44 Score=30.92 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=56.3
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCc------cH----HHHHh--CCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCG------GA----EYARD--NSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~------~~----~~A~~--~gIP~~~~~~~~~~~~~~ 146 (294)
+.+||+++.-+.......++.++.. +..++ +++.|++-. +. ++|++ .|..+....+
T Consensus 160 ~gl~va~vGD~~~~va~Sl~~~~~~--~G~~v--~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d-------- 227 (328)
T 3grf_A 160 KGIKFAYCGDSMNNVTYDLMRGCAL--LGMEC--HVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHD-------- 227 (328)
T ss_dssp GGCCEEEESCCSSHHHHHHHHHHHH--HTCEE--EEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESS--------
T ss_pred CCcEEEEeCCCCcchHHHHHHHHHH--cCCEE--EEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcC--------
Confidence 4678888844423345556555432 12343 333343321 22 34444 6776655431
Q ss_pred ChhHHHHHHHhcCCcEEEEecc------------------ccccChhHHhcCCCCEEEEcCCCCCCCCCC
Q 022631 147 SPNDLVAALSEVNVDFILLAGY------------------LKLIPMELIRAYPRSIVNIHPSLLPAFGGK 198 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy------------------~~ilp~~~l~~~~~g~iNiHPSlLP~yRG~ 198 (294)
+.+.++ +.|+|..-.| .+.|..++++..+..++-+|| ||.+||.
T Consensus 228 ----~~eav~--~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~--lPa~Rg~ 289 (328)
T 3grf_A 228 ----CKKGCE--GVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRGE 289 (328)
T ss_dssp ----HHHHHT--TCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTTT
T ss_pred ----HHHHhc--CCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECC--CCCCCCC
Confidence 223332 6788875322 234788888887778999998 5889984
No 73
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=58.61 E-value=43 Score=29.45 Aligned_cols=108 Identities=11% Similarity=0.009 Sum_probs=51.7
Q ss_pred ceeEEEEEeCCc--hHHHHHHHHHHcCCCC-ceEEEEecCCCCCccHHHHHhCCCCE-EEcCCCCCCCCCCC--------
Q 022631 80 KKNLAVFVSGGG--SNFRSIHAACLAGSVY-GDVVVLVTNKPDCGGAEYARDNSIPV-ILFPKTKDEPNGLS-------- 147 (294)
Q Consensus 80 ~~rIaVl~SG~g--s~l~~ll~~~~~~~~~-~eI~~Vvt~~~~~~~~~~A~~~gIP~-~~~~~~~~~~~~~~-------- 147 (294)
++||.+++...+ .....++..+.+. .. +++..+++........+..+..|++. +.+.... + ...
T Consensus 8 ~mkIl~v~~~~~~~~~~~~l~~~L~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~ 83 (375)
T 3beo_A 8 RLKVMTIFGTRPEAIKMAPLVLELQKH-PEKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMK--D-RQTLIDITTRG 83 (375)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHTTC-TTTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCC--T-TCCHHHHHHHH
T ss_pred CceEEEEecCcHHHHHHHHHHHHHHhC-CCCCCeEEEEcCCCHHHHHHHHHHcCCCCccccccCC--C-cccHHHHHHHH
Confidence 468887753321 1234555555432 12 46666665432211223334467764 3222110 1 011
Q ss_pred hhHHHHHHHhcCCcEEEEecc--ccccChhHHhcCCCCEEEEcCCC
Q 022631 148 PNDLVAALSEVNVDFILLAGY--LKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy--~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
-..+.+.+++++||++++.+. ..++..-.....+..++..|.++
T Consensus 84 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~ 129 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL 129 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc
Confidence 123667788899999998553 11111111122344577777765
No 74
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=58.47 E-value=22 Score=31.72 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=39.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.||+|+.. |.--+.++..+... ...++++|.. +......++|+++|++...- +..+.+ ..+
T Consensus 1 ~~~vgiiG~--G~~g~~~~~~l~~~-~~~~~~~v~d-~~~~~~~~~~~~~~~~~~~~-------------~~~~~l-~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGT--GAISHHFIEAAHTS-GEYQLVAIYS-RKLETAATFASRYQNIQLFD-------------QLEVFF-KSS 62 (325)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHT-TSEEEEEEEC-SSHHHHHHHGGGSSSCEEES-------------CHHHHH-TSS
T ss_pred CeEEEEEeC--CHHHHHHHHHHHhC-CCeEEEEEEe-CCHHHHHHHHHHcCCCeEeC-------------CHHHHh-CCC
Confidence 357888844 43334444444332 1467777654 32223456788888754321 122344 557
Q ss_pred CcEEEEecccc
Q 022631 160 VDFILLAGYLK 170 (294)
Q Consensus 160 ~DliV~agy~~ 170 (294)
+|+++++.-..
T Consensus 63 ~D~V~i~tp~~ 73 (325)
T 2ho3_A 63 FDLVYIASPNS 73 (325)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEEeCChH
Confidence 88888876443
No 75
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=57.46 E-value=41 Score=28.23 Aligned_cols=51 Identities=18% Similarity=0.282 Sum_probs=32.1
Q ss_pred CCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEE
Q 022631 76 SGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVIL 135 (294)
Q Consensus 76 ~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~ 135 (294)
+...++|+.|+ |.|..-+.+++.+++. ..++++.+-+.+... .-.|+|++-
T Consensus 8 ~~~~~k~v~Ii--GAGg~g~~v~~~l~~~--~~~~vgfiDd~~~~~-----~~~g~~Vlg 58 (220)
T 4ea9_A 8 ASLAIGGVVII--GGGGHAKVVIESLRAC--GETVAAIVDADPTRR-----AVLGVPVVG 58 (220)
T ss_dssp CCCCSSCEEEE--CCSHHHHHHHHHHHHT--TCCEEEEECSCC--------CBTTBCEEE
T ss_pred cccCCCCEEEE--cCCHHHHHHHHHHHhC--CCEEEEEEeCCcccC-----cCCCeeEEC
Confidence 34446777776 6677777777776653 467888876544321 246888874
No 76
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=56.80 E-value=11 Score=33.76 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=49.2
Q ss_pred CCCceeEEEEEeC-----Cc--hHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCC-CCCCCC-
Q 022631 77 GIKKKNLAVFVSG-----GG--SNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD-EPNGLS- 147 (294)
Q Consensus 77 ~~~~~rIaVl~SG-----~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~-~~~~~~- 147 (294)
..+++||+++... +| ..+..+.+++... .++|..+..........++....+ .++.++.... ......
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 93 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSVARLRFGP 93 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCCCTTEEECC-CCC------------CCH
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCccccCCcccccCC-cEEeccccCCcccccccH
Confidence 3446777777642 23 3455666666543 356665554433221111212222 3322221100 000011
Q ss_pred --hhHHHHHHHhcCCcEEEEeccccccChhHHh-cCCC-CEEEEcCCC
Q 022631 148 --PNDLVAALSEVNVDFILLAGYLKLIPMELIR-AYPR-SIVNIHPSL 191 (294)
Q Consensus 148 --d~~l~~~L~~~~~DliV~agy~~ilp~~~l~-~~~~-g~iNiHPSl 191 (294)
-..+.+.+++.++|++++.++......-++. .... -++.+|...
T Consensus 94 ~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~ 141 (406)
T 2gek_A 94 ATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST 141 (406)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc
Confidence 1457778888999999987764433222222 1122 366777754
No 77
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=56.56 E-value=20 Score=32.85 Aligned_cols=71 Identities=20% Similarity=0.108 Sum_probs=38.1
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++.||+|+.. |.--+..+..+..- ...++++|+...++ ..+.|++.|++++ . ++.+.|...
T Consensus 4 ~~~~vgiiG~--G~~g~~~~~~l~~~-~~~~l~av~d~~~~--~~~~a~~~g~~~~--~------------~~~~ll~~~ 64 (359)
T 3e18_A 4 KKYQLVIVGY--GGMGSYHVTLASAA-DNLEVHGVFDILAE--KREAAAQKGLKIY--E------------SYEAVLADE 64 (359)
T ss_dssp CCEEEEEECC--SHHHHHHHHHHHTS-TTEEEEEEECSSHH--HHHHHHTTTCCBC--S------------CHHHHHHCT
T ss_pred CcCcEEEECc--CHHHHHHHHHHHhC-CCcEEEEEEcCCHH--HHHHHHhcCCcee--C------------CHHHHhcCC
Confidence 3567777744 43333333443322 24678777654322 2356777887643 1 123445556
Q ss_pred CCcEEEEecc
Q 022631 159 NVDFILLAGY 168 (294)
Q Consensus 159 ~~DliV~agy 168 (294)
++|+++++.-
T Consensus 65 ~~D~V~i~tp 74 (359)
T 3e18_A 65 KVDAVLIATP 74 (359)
T ss_dssp TCCEEEECSC
T ss_pred CCCEEEEcCC
Confidence 7888877653
No 78
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.39 E-value=17 Score=33.76 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=29.9
Q ss_pred CceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEec
Q 022631 107 YGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 107 ~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ag 167 (294)
..+|++|.. +......++|+++|++-.+- +.-+.|+.-++|+|+++.
T Consensus 58 ~~elvav~d-~~~~~a~~~a~~~~~~~~y~-------------d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 58 RPHLYALAD-QDQAMAERHAAKLGAEKAYG-------------DWRELVNDPQVDVVDITS 104 (412)
T ss_dssp EEEEEEEEC-SSHHHHHHHHHHHTCSEEES-------------SHHHHHHCTTCCEEEECS
T ss_pred CeEEEEEEc-CCHHHHHHHHHHcCCCeEEC-------------CHHHHhcCCCCCEEEECC
Confidence 357777654 33334567899999985431 233456667888888765
No 79
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=56.38 E-value=39 Score=25.86 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=39.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+++|.|+ |.|..-+.+...+... ..+|+++-.+ ....+.+.+.|+.++..+. .+++.++.+.-.+
T Consensus 6 ~~~v~I~--G~G~iG~~la~~L~~~--g~~V~~id~~---~~~~~~~~~~~~~~~~gd~--------~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVI--GSEAAGVGLVRELTAA--GKKVLAVDKS---KEKIELLEDEGFDAVIADP--------TDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEE--CCSHHHHHHHHHHHHT--TCCEEEEESC---HHHHHHHHHTTCEEEECCT--------TCHHHHHHSCCTT
T ss_pred CCEEEEE--CCCHHHHHHHHHHHHC--CCeEEEEECC---HHHHHHHHHCCCcEEECCC--------CCHHHHHhCCccc
Confidence 4566666 5565555566655443 2456544322 1233455667887776543 2345555443447
Q ss_pred CcEEEEe
Q 022631 160 VDFILLA 166 (294)
Q Consensus 160 ~DliV~a 166 (294)
+|++|++
T Consensus 71 ~d~vi~~ 77 (141)
T 3llv_A 71 VSAVLIT 77 (141)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8888764
No 80
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=56.21 E-value=26 Score=31.83 Aligned_cols=76 Identities=11% Similarity=0.100 Sum_probs=41.8
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC--EEEcCCCCCCCCCCChhHHHHHHH
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP--VILFPKTKDEPNGLSPNDLVAALS 156 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP--~~~~~~~~~~~~~~~d~~l~~~L~ 156 (294)
++.||+|+..| .--+.++.++... ...++++|+... .....++|+++|+| ...+. ++.+.|+
T Consensus 5 ~~~~vgiiG~G--~ig~~~~~~l~~~-~~~~lv~v~d~~-~~~~~~~a~~~~~~~~~~~~~------------~~~~ll~ 68 (362)
T 1ydw_A 5 TQIRIGVMGCA--DIARKVSRAIHLA-PNATISGVASRS-LEKAKAFATANNYPESTKIHG------------SYESLLE 68 (362)
T ss_dssp -CEEEEEESCC--TTHHHHHHHHHHC-TTEEEEEEECSS-HHHHHHHHHHTTCCTTCEEES------------SHHHHHH
T ss_pred CceEEEEECch--HHHHHHHHHHhhC-CCcEEEEEEcCC-HHHHHHHHHHhCCCCCCeeeC------------CHHHHhc
Confidence 35788888544 3333444444331 146777766533 22345788888874 12111 2334556
Q ss_pred hcCCcEEEEecccc
Q 022631 157 EVNVDFILLAGYLK 170 (294)
Q Consensus 157 ~~~~DliV~agy~~ 170 (294)
..++|+++++.=..
T Consensus 69 ~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 69 DPEIDALYVPLPTS 82 (362)
T ss_dssp CTTCCEEEECCCGG
T ss_pred CCCCCEEEEcCChH
Confidence 66899999876433
No 81
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=56.19 E-value=20 Score=28.47 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=40.8
Q ss_pred ceeEEEEEeCCc--hH-HHHHHHHHHcCCCCceEE--EEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 80 KKNLAVFVSGGG--SN-FRSIHAACLAGSVYGDVV--VLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 80 ~~rIaVl~SG~g--s~-l~~ll~~~~~~~~~~eI~--~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
++||.++++|+- |- .++++.+...+ ..+|. ++-..+.+....+.++++||++-. ..++.+.+..+
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~~--~~~v~SAGt~~~~~~p~a~~~l~~~Gid~s~-----~~sr~l~~~~~--- 72 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLGD--EWKVYSAGIEAHGLNPNAVKAMKEVGIDISN-----QTSDIIDSDIL--- 72 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSCT--TEEEEEEESSCCCCCHHHHHHHHHTTCCCTT-----CCCCBCCHHHH---
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCCC--CEEEEcCcCCCCCCCHHHHHHHHHcCCCccc-----CccCcCCHHHh---
Confidence 457888888844 22 44555554322 23332 222222333467889999998631 12344443332
Q ss_pred HHhcCCcEEEEe
Q 022631 155 LSEVNVDFILLA 166 (294)
Q Consensus 155 L~~~~~DliV~a 166 (294)
..+|+||..
T Consensus 73 ---~~~D~Ii~m 81 (139)
T 1jl3_A 73 ---NNADLVVTL 81 (139)
T ss_dssp ---TTCSEEEEC
T ss_pred ---hcCCEEEEe
Confidence 368999987
No 82
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=55.67 E-value=3.7 Score=34.61 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=40.7
Q ss_pred ceeeecCCCCceeEEEEEeCCchHHHHHHHHHHc-CCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCCh
Q 022631 70 YEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLA-GSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSP 148 (294)
Q Consensus 70 ~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~-~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d 148 (294)
+++|.+...++.|++|+.+|..- . +.... |+. .|.....+.++.++.|..+.......+ +.
T Consensus 5 ~~~h~~~~~~~~rv~IittGde~-~----~~~~~~G~i--------~Dsn~~~L~~~l~~~G~~v~~~~iv~D-----d~ 66 (178)
T 2pjk_A 5 HKKHKENAPKSLNFYVITISTSR-Y----EKLLKKEPI--------VDESGDIIKQLLIENGHKIIGYSLVPD-----DK 66 (178)
T ss_dssp --------CCCCEEEEEEECHHH-H----HHHHTTCCC--------CCHHHHHHHHHHHHTTCEEEEEEEECS-----CH
T ss_pred hHHHHhcCCCCCEEEEEEeCccc-c----cccccCCeE--------eehHHHHHHHHHHHCCCEEEEEEEeCC-----CH
Confidence 45666677789999999988321 1 22334 322 011112345788889987655432111 12
Q ss_pred hHHHHHHHhc----CCcEEEEecc
Q 022631 149 NDLVAALSEV----NVDFILLAGY 168 (294)
Q Consensus 149 ~~l~~~L~~~----~~DliV~agy 168 (294)
+++.+.|++. +.|+||+.|=
T Consensus 67 ~~I~~al~~a~~~~~~DlVittGG 90 (178)
T 2pjk_A 67 IKILKAFTDALSIDEVDVIISTGG 90 (178)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCC
Confidence 4455555432 4899998873
No 83
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=55.20 E-value=47 Score=29.43 Aligned_cols=110 Identities=14% Similarity=0.052 Sum_probs=55.4
Q ss_pred ceeEEEEEeCCc--hHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCE-EEcCCCCCCCCCC------ChhH
Q 022631 80 KKNLAVFVSGGG--SNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPV-ILFPKTKDEPNGL------SPND 150 (294)
Q Consensus 80 ~~rIaVl~SG~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~-~~~~~~~~~~~~~------~d~~ 150 (294)
++||.+++...+ ..+..++.++... ..+++..+++........+..+..|+.+ +.++... ..... .-..
T Consensus 5 mmkIl~v~~~~~~~~~~~~l~~~L~~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 82 (376)
T 1v4v_A 5 MKRVVLAFGTRPEATKMAPVYLALRGI-PGLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQ-ERQALPDLAARILPQ 82 (376)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTS-TTEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCS-SCCCHHHHHHHHHHH
T ss_pred ceEEEEEEeccHHHHHHHHHHHHHHhC-CCCceEEEEcCCcHHHHHHHHHHcCCCcccccccCC-CCccHHHHHHHHHHH
Confidence 478887754321 2245566666542 1356666666432111223445577765 3333211 00000 0124
Q ss_pred HHHHHHhcCCcEEEEeccc-cccChhHHh-cCCCCEEEEcCCC
Q 022631 151 LVAALSEVNVDFILLAGYL-KLIPMELIR-AYPRSIVNIHPSL 191 (294)
Q Consensus 151 l~~~L~~~~~DliV~agy~-~ilp~~~l~-~~~~g~iNiHPSl 191 (294)
+.+.+++++||++++.++. ..++.-+.. ...-.++.+|.++
T Consensus 83 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~ 125 (376)
T 1v4v_A 83 AARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL 125 (376)
T ss_dssp HHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC
T ss_pred HHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 5677888999999996542 222222222 2234578888776
No 84
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=54.69 E-value=21 Score=32.65 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=36.8
Q ss_pred ceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+.||+|+..| .--. ..+.++... ...++++|+... .....++|++++.+..+ .++.+.|...
T Consensus 5 ~~rigiIG~G--~~g~~~~~~~l~~~-~~~~l~av~d~~-~~~~~~~a~~~~~~~~~-------------~~~~~ll~~~ 67 (359)
T 3m2t_A 5 LIKVGLVGIG--AQMQENLLPSLLQM-QDIRIVAACDSD-LERARRVHRFISDIPVL-------------DNVPAMLNQV 67 (359)
T ss_dssp CEEEEEECCS--HHHHHTHHHHHHTC-TTEEEEEEECSS-HHHHGGGGGTSCSCCEE-------------SSHHHHHHHS
T ss_pred cceEEEECCC--HHHHHHHHHHHHhC-CCcEEEEEEcCC-HHHHHHHHHhcCCCccc-------------CCHHHHhcCC
Confidence 5688887444 3222 233443322 246777766432 22334566666543222 1233455666
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
++|+++++.
T Consensus 68 ~vD~V~i~t 76 (359)
T 3m2t_A 68 PLDAVVMAG 76 (359)
T ss_dssp CCSEEEECS
T ss_pred CCCEEEEcC
Confidence 788888764
No 85
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=54.21 E-value=26 Score=32.83 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=44.1
Q ss_pred CCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCC-CCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 76 SGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKP-DCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 76 ~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~-~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
+..+++||.|+ |+|.....++.++++- ..++++|.++.. ++...++|.+. +.++.......-.+.+.+++.
T Consensus 2 n~m~~~kiLI~--g~g~~a~~i~~aa~~~--G~~~v~v~~~~~~~~~~~~~ad~~----~~i~~~~~~~~~~d~~~l~~~ 73 (446)
T 3ouz_A 2 NAMEIKSILIA--NRGEIALRALRTIKEM--GKKAICVYSEADKDALYLKYADAS----ICIGKARSSESYLNIPAIIAA 73 (446)
T ss_dssp CTTCCCEEEEC--CCHHHHHHHHHHHHHT--TCEEEEEEEGGGTTCTHHHHSSEE----EEEECCTTTTGGGCHHHHHHH
T ss_pred CccccceEEEE--CCCHHHHHHHHHHHHc--CCEEEEEEcCcccccchHhhCCEE----EEcCCCCccccccCHHHHHHH
Confidence 44556777665 6777777777777653 356777765542 34444455432 222111100011223567777
Q ss_pred HHhcCCcEEE
Q 022631 155 LSEVNVDFIL 164 (294)
Q Consensus 155 L~~~~~DliV 164 (294)
+++.++|.++
T Consensus 74 ~~~~~~d~i~ 83 (446)
T 3ouz_A 74 AEIAEADAIF 83 (446)
T ss_dssp HHHHTCSEEE
T ss_pred HHHhCcCEEE
Confidence 7778888766
No 86
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=53.95 E-value=26 Score=33.73 Aligned_cols=53 Identities=8% Similarity=-0.108 Sum_probs=28.5
Q ss_pred CceeEEEEEeCC--chHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 79 KKKNLAVFVSGG--GSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 79 ~~~rIaVl~SG~--gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
++.||+|+..|. |.--...+.++..-....+|++|+. +......++|+++|+|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d-~~~~~a~~~a~~~g~~ 92 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN-PTLKSSLQTIEQLQLK 92 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC-SCHHHHHHHHHHTTCT
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEe-CCHHHHHHHHHHcCCC
Confidence 357888886531 3322233333332112467777654 3322345778888987
No 87
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=53.10 E-value=58 Score=28.77 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=53.4
Q ss_pred eeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCE-EEcCCCCCCCCCCC------hhH
Q 022631 81 KNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPV-ILFPKTKDEPNGLS------PND 150 (294)
Q Consensus 81 ~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~-~~~~~~~~~~~~~~------d~~ 150 (294)
+||.++ +|..+. +..++.++.+.. ++++..+++........+.....|+++ +.++.... ..... -..
T Consensus 1 mkIl~v-~~~~~~~~~~~~l~~~L~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 77 (384)
T 1vgv_A 1 MKVLTV-FGTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQP-GQGLTEITCRILEG 77 (384)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHST-TCEEEEEECCSSGGGGHHHHHHHTCCCSEECCCCST-TSCHHHHHHHHHHH
T ss_pred CeEEEE-ecccHHHHHHHHHHHHHHhCC-CCceEEEEcCCCHHHHHHHHHHcCCCCCcceecCCC-CccHHHHHHHHHHH
Confidence 366665 443332 445666665431 225655566443322334555567765 34332110 01110 135
Q ss_pred HHHHHHhcCCcEEEEecc-ccccChhHHhc-CCCCEEEEcCCC
Q 022631 151 LVAALSEVNVDFILLAGY-LKLIPMELIRA-YPRSIVNIHPSL 191 (294)
Q Consensus 151 l~~~L~~~~~DliV~agy-~~ilp~~~l~~-~~~g~iNiHPSl 191 (294)
+.+.+++.+||++++.+. ...++..+... ..-.++..+.++
T Consensus 78 l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~ 120 (384)
T 1vgv_A 78 LKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL 120 (384)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc
Confidence 667788999999998763 22233333322 233466665554
No 88
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=52.92 E-value=62 Score=28.91 Aligned_cols=74 Identities=15% Similarity=0.028 Sum_probs=38.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH----
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL---- 155 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L---- 155 (294)
+.||+|+..| |.--...+.++... ..++++|+...++. ...++..+..-.+- +-+++++.+
T Consensus 3 mirvgiIG~g-G~i~~~h~~~l~~~--~~~lvav~d~~~~~--~~~~~~~~~~~~~~----------~~~~ll~~~~~l~ 67 (312)
T 3o9z_A 3 MTRFALTGLA-GYIAPRHLKAIKEV--GGVLVASLDPATNV--GLVDSFFPEAEFFT----------EPEAFEAYLEDLR 67 (312)
T ss_dssp CCEEEEECTT-SSSHHHHHHHHHHT--TCEEEEEECSSCCC--GGGGGTCTTCEEES----------CHHHHHHHHHHHH
T ss_pred ceEEEEECCC-hHHHHHHHHHHHhC--CCEEEEEEcCCHHH--HHHHhhCCCCceeC----------CHHHHHHHhhhhc
Confidence 6899999663 21222333333332 46888877644443 23455543332221 124454333
Q ss_pred -HhcCCcEEEEecc
Q 022631 156 -SEVNVDFILLAGY 168 (294)
Q Consensus 156 -~~~~~DliV~agy 168 (294)
..-++|+++++.-
T Consensus 68 ~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 68 DRGEGVDYLSIASP 81 (312)
T ss_dssp HTTCCCSEEEECSC
T ss_pred ccCCCCcEEEECCC
Confidence 4567888887653
No 89
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=52.33 E-value=61 Score=29.61 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=0.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCc--------cHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCG--------GAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~--------~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
.+||+++.-++...-..+.-..+-| +-.+++.|++-. ..++|++.|..+.... ++
T Consensus 146 gl~va~vGD~~~va~Sl~~~~~~~G-----~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~------------d~ 208 (307)
T 3tpf_A 146 IAKVAFIGDSNNMCNSWLITAAILG-----FEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY------------DK 208 (307)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHT-----CEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES------------CH
T ss_pred CCEEEEEcCCCccHHHHHHHHHHcC-----CEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc------------CH
Q ss_pred HHHHHhcCCcEEEEecc-----------------ccccChhHHhcCCCCEEEEcCCCCCCCCC
Q 022631 152 VAALSEVNVDFILLAGY-----------------LKLIPMELIRAYPRSIVNIHPSLLPAFGG 197 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy-----------------~~ilp~~~l~~~~~g~iNiHPSlLP~yRG 197 (294)
.+.++ +.|++..-.| .+.|..++++..+..++-+|| ||.+||
T Consensus 209 ~eav~--~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~--lPa~Rg 267 (307)
T 3tpf_A 209 FEALK--DKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHC--LPAYRG 267 (307)
T ss_dssp HHHHT--TCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred HHHhc--CCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECC--CCCCCC
No 90
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=52.00 E-value=33 Score=32.61 Aligned_cols=59 Identities=8% Similarity=0.038 Sum_probs=37.2
Q ss_pred ceeEEEEEeCCchH--HHHHHHHHHcCCCCceEEEEecCCCCC--------ccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGGSN--FRSIHAACLAGSVYGDVVVLVTNKPDC--------GGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~gs~--l~~ll~~~~~~~~~~eI~~Vvt~~~~~--------~~~~~A~~~gIP~~~~~~ 138 (294)
..||+|.+|||--. +..++..........++.+|..|..-. .+.++|+++|||+++++-
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~ 81 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERV 81 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEe
Confidence 45899999996533 333333332211346788887775321 246899999999987753
No 91
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=50.61 E-value=30 Score=27.69 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=45.5
Q ss_pred CceeEEEEEeCCc---hHHHHHHHHHHcCCCCceEEEEec----CCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 79 KKKNLAVFVSGGG---SNFRSIHAACLAGSVYGDVVVLVT----NKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 79 ~~~rIaVl~SG~g---s~l~~ll~~~~~~~~~~eI~~Vvt----~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
+++||.++++|+- .-.++++.....+.....=.++-. ++.+....+.++++||++-.. .++.+.+..+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~-----~sr~l~~~~~ 77 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQ-----RARQITKADF 77 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCC-----CCCCCCSHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcC-----eeccCCHhHh
Confidence 3568888887733 446677777655433332233322 112334578899999986422 2344444432
Q ss_pred HHHHHhcCCcEEEEecc
Q 022631 152 VAALSEVNVDFILLAGY 168 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy 168 (294)
.++|+||.+.-
T Consensus 78 ------~~~DlIi~m~~ 88 (146)
T 1p8a_A 78 ------SKFDVIAALDQ 88 (146)
T ss_dssp ------HSCSEEEESSH
T ss_pred ------hcCCEEEEeCh
Confidence 27899999865
No 92
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=50.24 E-value=16 Score=34.46 Aligned_cols=76 Identities=11% Similarity=0.059 Sum_probs=40.2
Q ss_pred CCceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCE---EEcCCCCCCCCCCChhHHHH
Q 022631 78 IKKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPV---ILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~---~~~~~~~~~~~~~~d~~l~~ 153 (294)
.++.||+|+ |.|.--+ .++..+.. ....++++|+... .....++++++|++. ..+.. ..+
T Consensus 81 ~~~irigiI--G~G~~g~~~~~~~l~~-~~~~~lvav~d~~-~~~~~~~a~~~g~~~~~~~~~~~------------~~~ 144 (433)
T 1h6d_A 81 DRRFGYAIV--GLGKYALNQILPGFAG-CQHSRIEALVSGN-AEKAKIVAAEYGVDPRKIYDYSN------------FDK 144 (433)
T ss_dssp CCCEEEEEE--CCSHHHHHTHHHHTTT-CSSEEEEEEECSC-HHHHHHHHHHTTCCGGGEECSSS------------GGG
T ss_pred CCceEEEEE--CCcHHHHHHHHHHHhh-CCCcEEEEEEcCC-HHHHHHHHHHhCCCcccccccCC------------HHH
Confidence 445677777 4444333 34454432 1246777766533 223457788889872 22221 112
Q ss_pred HHHhcCCcEEEEeccc
Q 022631 154 ALSEVNVDFILLAGYL 169 (294)
Q Consensus 154 ~L~~~~~DliV~agy~ 169 (294)
.++..++|+++++.-.
T Consensus 145 ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 145 IAKDPKIDAVYIILPN 160 (433)
T ss_dssp GGGCTTCCEEEECSCG
T ss_pred HhcCCCCCEEEEcCCc
Confidence 3444567887776543
No 93
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=50.12 E-value=20 Score=33.85 Aligned_cols=49 Identities=10% Similarity=-0.104 Sum_probs=26.3
Q ss_pred ceeEEEEEe----CC-chHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 80 KKNLAVFVS----GG-GSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 80 ~~rIaVl~S----G~-gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
+.||+|+.. |. |.... ..+..-....++++|+.. ......++|+++|+|
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~---~~l~~~~~~~~lvav~d~-~~~~~~~~a~~~g~~ 73 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHY---PAILQLSSQFQITALYSP-KIETSIATIQRLKLS 73 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHH---HHHHHTTTTEEEEEEECS-SHHHHHHHHHHTTCT
T ss_pred CCEEEEEcccCCCChHHHHHH---HHHHhcCCCeEEEEEEeC-CHHHHHHHHHHcCCC
Confidence 578888866 32 22222 222221014678777543 322345788888987
No 94
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=50.10 E-value=25 Score=31.87 Aligned_cols=71 Identities=11% Similarity=0.075 Sum_probs=40.1
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.||+|+.. |.--+..+.++.. ....++++|+. +......++|+++|++.+ . ++.+.+...+
T Consensus 5 ~~~vgiiG~--G~~g~~~~~~l~~-~~~~~lvav~d-~~~~~~~~~~~~~g~~~~--~------------~~~~~l~~~~ 66 (354)
T 3db2_A 5 PVGVAAIGL--GRWAYVMADAYTK-SEKLKLVTCYS-RTEDKREKFGKRYNCAGD--A------------TMEALLARED 66 (354)
T ss_dssp CEEEEEECC--SHHHHHHHHHHTT-CSSEEEEEEEC-SSHHHHHHHHHHHTCCCC--S------------SHHHHHHCSS
T ss_pred cceEEEEcc--CHHHHHHHHHHHh-CCCcEEEEEEC-CCHHHHHHHHHHcCCCCc--C------------CHHHHhcCCC
Confidence 568888844 4333444444432 22467776654 333334567788888752 1 2234455667
Q ss_pred CcEEEEecc
Q 022631 160 VDFILLAGY 168 (294)
Q Consensus 160 ~DliV~agy 168 (294)
+|+++++.-
T Consensus 67 ~D~V~i~tp 75 (354)
T 3db2_A 67 VEMVIITVP 75 (354)
T ss_dssp CCEEEECSC
T ss_pred CCEEEEeCC
Confidence 888887653
No 95
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=49.66 E-value=23 Score=30.18 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=33.3
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC------ccHHHHHhCCCC-EEEcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC------GGAEYARDNSIP-VILFP 137 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~------~~~~~A~~~gIP-~~~~~ 137 (294)
+.|++|++|||--..-.+......+ .++.+|..+.... .+.++|++.||| ++.++
T Consensus 2 ~~kvvv~lSGG~DS~~~l~ll~~~~---~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~ 63 (232)
T 2pg3_A 2 MKRAVVVFSGGQDSTTCLIQALQDY---DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLD 63 (232)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHC---SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCEEEEecCcHHHHHHHHHHHHcC---CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 3589999999653332222223333 3676665543321 245789999999 77765
No 96
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=49.64 E-value=35 Score=32.65 Aligned_cols=60 Identities=22% Similarity=0.009 Sum_probs=36.9
Q ss_pred CCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcC
Q 022631 77 GIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFP 137 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~ 137 (294)
.+.+++|+||.|. ||--.+-++-++...-.++|+++..++.-.-..+.|++++-.++.+.
T Consensus 6 ~~~~k~i~ILGST-GSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~ 65 (406)
T 1q0q_A 6 HSGMKQLTILGST-GSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMD 65 (406)
T ss_dssp ---CEEEEEETTT-SHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEES
T ss_pred cCCceeEEEEccC-cHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEc
Confidence 3447899999554 55544445545444335789888885433345678888887776654
No 97
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=49.17 E-value=20 Score=33.62 Aligned_cols=59 Identities=15% Similarity=-0.029 Sum_probs=35.3
Q ss_pred CCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC--------------CccHHHHHhCCCCEEEcCC
Q 022631 77 GIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD--------------CGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~--------------~~~~~~A~~~gIP~~~~~~ 138 (294)
+.+..||+|.+|||--..-++...... ..+|.+|..+.-. ..+.++|+++|||++.++-
T Consensus 14 ~~~~~kVvVa~SGGvDSsv~a~lL~~~---G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 14 SETAKKVIVGMSGGVDSSVSAWLLQQQ---GYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp ---CCEEEEECCSCSTTHHHHHHHHTT---CCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCEEEEEEEChHHHHHHHHHHHHc---CCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 344679999999965332222222222 3578887765311 1246889999999988763
No 98
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=49.03 E-value=22 Score=31.64 Aligned_cols=70 Identities=21% Similarity=0.284 Sum_probs=37.3
Q ss_pred eEEEEEeCCchHHHHH-HHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCC
Q 022631 82 NLAVFVSGGGSNFRSI-HAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNV 160 (294)
Q Consensus 82 rIaVl~SG~gs~l~~l-l~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~ 160 (294)
||+|+ |.|.--+.. +..+..+ ..++++|+.. ......++++++|++... . +..+.++..++
T Consensus 2 ~vgii--G~G~~g~~~~~~~l~~~--~~~~vav~d~-~~~~~~~~~~~~g~~~~~-~------------~~~~~l~~~~~ 63 (332)
T 2glx_A 2 RWGLI--GASTIAREWVIGAIRAT--GGEVVSMMST-SAERGAAYATENGIGKSV-T------------SVEELVGDPDV 63 (332)
T ss_dssp EEEEE--SCCHHHHHTHHHHHHHT--TCEEEEEECS-CHHHHHHHHHHTTCSCCB-S------------CHHHHHTCTTC
T ss_pred eEEEE--cccHHHHHhhhHHhhcC--CCeEEEEECC-CHHHHHHHHHHcCCCccc-C------------CHHHHhcCCCC
Confidence 67777 444333333 3344332 4677766543 322345678888886221 1 12234455578
Q ss_pred cEEEEeccc
Q 022631 161 DFILLAGYL 169 (294)
Q Consensus 161 DliV~agy~ 169 (294)
|+++++.-.
T Consensus 64 D~V~i~tp~ 72 (332)
T 2glx_A 64 DAVYVSTTN 72 (332)
T ss_dssp CEEEECSCG
T ss_pred CEEEEeCCh
Confidence 888877543
No 99
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=48.99 E-value=17 Score=33.28 Aligned_cols=37 Identities=5% Similarity=-0.115 Sum_probs=18.6
Q ss_pred CceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecCCC
Q 022631 79 KKKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTNKP 118 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~~~ 118 (294)
++.||+|+..| .--+. .+..+.. ....++++|+...+
T Consensus 4 ~~~rvgiiG~G--~~g~~~~~~~l~~-~~~~~l~av~d~~~ 41 (362)
T 3fhl_A 4 EIIKTGLAAFG--MSGQVFHAPFIST-NPHFELYKIVERSK 41 (362)
T ss_dssp CCEEEEESCCS--HHHHHTTHHHHHH-CTTEEEEEEECSSC
T ss_pred CceEEEEECCC--HHHHHHHHHHHhh-CCCeEEEEEEcCCH
Confidence 35788887444 32222 1222222 12478888776443
No 100
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=48.83 E-value=70 Score=29.02 Aligned_cols=110 Identities=15% Similarity=0.155 Sum_probs=54.5
Q ss_pred cCCCCceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCC-CC-------C
Q 022631 75 DSGIKKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK-DE-------P 143 (294)
Q Consensus 75 ~~~~~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~-~~-------~ 143 (294)
+....++||+++..++.+. +..|..++.+. .++|..+.+ .. ..+..++.|++++.++..- .. +
T Consensus 7 ~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~--Gh~V~~~~~-~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 7 SASVTPRHISFFNIPGHGHVNPSLGIVQELVAR--GHRVSYAIT-DE---FAAQVKAAGATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp ----CCCEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEEC-GG---GHHHHHHHTCEEEECCCCSCCTTCTTCCCC
T ss_pred cCCcccceEEEEeCCCCcccchHHHHHHHHHHC--CCeEEEEeC-HH---HHHHHHhCCCEEEecCccccccccchhhcc
Confidence 3334467888876554433 34555555442 256665543 22 2345666798887765421 00 0
Q ss_pred CCC-------------ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCC
Q 022631 144 NGL-------------SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 144 ~~~-------------~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
... .-+++.+.+++.++|+||.-.+.. ....+-+...-..+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~-~~~~~A~~lgIP~v~~~~~~ 140 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASW-PAPVLGRKWDIPFVQLSPTF 140 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCT-HHHHHHHHHTCCEEEEESSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCccc-HHHHHHHhcCCCEEEEeccc
Confidence 000 012344556678999999876531 11222223333456665443
No 101
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=48.59 E-value=35 Score=26.79 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=40.9
Q ss_pred ceeEEEEEeCCc--h-HHHHHHHHHHcCCCCceEEE--EecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 80 KKNLAVFVSGGG--S-NFRSIHAACLAGSVYGDVVV--LVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 80 ~~rIaVl~SG~g--s-~l~~ll~~~~~~~~~~eI~~--Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
++||.++++|+- | -.++++.....+ ..+|.- +-..+.+....+.++++||++-. ..++.+.+..+
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~~~~~~p~a~~~l~~~Gid~s~-----~~ar~l~~~~~--- 72 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILGE--GWNVYSAGIETHGVNPKAIEAMKEVDIDISN-----HTSDLIDNDIL--- 72 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTT--TEEEEEEESSCCCCCHHHHHHHHHTTCCCTT-----CCCCBCCHHHH---
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcCC--CEEEEcCcCCCCCCCHHHHHHHHHcCCCccc-----CccccCChHHh---
Confidence 467888888744 2 244555554322 233322 22222333467889999998631 12344444332
Q ss_pred HHhcCCcEEEEec
Q 022631 155 LSEVNVDFILLAG 167 (294)
Q Consensus 155 L~~~~~DliV~ag 167 (294)
..+|+||...
T Consensus 73 ---~~~D~Ii~m~ 82 (131)
T 1jf8_A 73 ---KQSDLVVTLC 82 (131)
T ss_dssp ---HHCSEEEECS
T ss_pred ---ccCCEEEEcC
Confidence 2589999874
No 102
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=48.41 E-value=93 Score=28.55 Aligned_cols=111 Identities=14% Similarity=0.033 Sum_probs=59.2
Q ss_pred CCceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCC-CEEEcCCCCCCCCCCC------
Q 022631 78 IKKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSI-PVILFPKTKDEPNGLS------ 147 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gI-P~~~~~~~~~~~~~~~------ 147 (294)
.+++||.++ .|.-+. +..++.+++.. ...++..++|...-.-..+..+.+|| |-+.++--.. .....
T Consensus 23 ~~m~ki~~v-~Gtr~~~~~~a~li~~l~~~-~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~~~~~-~~~~~~~~~~~ 99 (396)
T 3dzc_A 23 NAMKKVLIV-FGTRPEAIKMAPLVQQLCQD-NRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEP-GQTLNGVTSKI 99 (396)
T ss_dssp -CCEEEEEE-ECSHHHHHHHHHHHHHHHHC-TTEEEEEEECCSSSHHHHHHHHHTTCCCSEECCCCCT-TCCHHHHHHHH
T ss_pred CCCCeEEEE-EeccHhHHHHHHHHHHHHhC-CCCcEEEEEecccHHHHHHHHHhcCCCCceeeecCCC-CCCHHHHHHHH
Confidence 446788776 454433 45666676653 24677777774332113345567888 4344432110 00000
Q ss_pred hhHHHHHHHhcCCcEEEEecccc-ccChhHHh-cCCCCEEEEcCCC
Q 022631 148 PNDLVAALSEVNVDFILLAGYLK-LIPMELIR-AYPRSIVNIHPSL 191 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy~~-ilp~~~l~-~~~~g~iNiHPSl 191 (294)
-..+.+.|++++||++++.|... .++..+.. ...-.++.+|.++
T Consensus 100 ~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~ 145 (396)
T 3dzc_A 100 LLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL 145 (396)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC
T ss_pred HHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 12456778899999999987322 23322222 2233578888766
No 103
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=48.36 E-value=51 Score=29.65 Aligned_cols=53 Identities=11% Similarity=0.052 Sum_probs=31.6
Q ss_pred CceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcC
Q 022631 79 KKKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFP 137 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~ 137 (294)
.++||.++..++.+. +..|..++... .++|.. ++.. ...+.....|++++.++
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~--GheV~v-~~~~---~~~~~~~~~G~~~~~~~ 69 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAA--GHEVLV-AASE---NMGPTVTGAGLPFAPTC 69 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHT--TCEEEE-EEEG---GGHHHHHHTTCCEEEEE
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHC--CCEEEE-EcCH---HHHHHHHhCCCeeEecC
Confidence 356888776554433 34566665543 246654 4432 24567788999988775
No 104
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=47.76 E-value=21 Score=34.35 Aligned_cols=57 Identities=21% Similarity=0.099 Sum_probs=34.6
Q ss_pred CCCceeEEEEEeCCc-h-HHHHHHHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCC-CEEEcCC
Q 022631 77 GIKKKNLAVFVSGGG-S-NFRSIHAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSI-PVILFPK 138 (294)
Q Consensus 77 ~~~~~rIaVl~SG~g-s-~l~~ll~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gI-P~~~~~~ 138 (294)
.-++.|++|.+|||- | ....++. ..| .+|++|..+-.. ..+.+.|++.|| |+++++-
T Consensus 11 ~~~~~KVVVA~SGGlDSSv~a~~Lk--e~G---~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl 74 (421)
T 1vl2_A 11 HHMKEKVVLAYSGGLDTSVILKWLC--EKG---FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDL 74 (421)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHH--HTT---CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEEC
T ss_pred ccccCCEEEEeCCcHHHHHHHHHHH--HCC---CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEec
Confidence 445889999999954 2 2222222 223 578777665422 135688999999 8887763
No 105
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=47.37 E-value=12 Score=29.69 Aligned_cols=76 Identities=11% Similarity=0.057 Sum_probs=40.1
Q ss_pred ceeEEEEEeCCc---hHHHHHHHHHHcCCCCceEEE--EecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 80 KKNLAVFVSGGG---SNFRSIHAACLAGSVYGDVVV--LVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 80 ~~rIaVl~SG~g---s~l~~ll~~~~~~~~~~eI~~--Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
++||.++++|+- .-.++++.+...+ ..++.- +-.++.+....+.++++||++-.. .++.+.+..
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~~--~~~v~SAGt~g~~~~~~a~~~l~e~Gid~s~~-----~sr~l~~~~---- 72 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGAG--KIAVTSCGLESSRVHPTAIAMMEEVGIDISGQ-----TSDPIENFN---- 72 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSBT--TEEEEEECCTTSSCCHHHHHHHHTTTCCCSSC-----CCCCGGGCC----
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcCC--CEEEEcccCCCCCCCHHHHHHHHHcCCCcccC-----ccccCChHH----
Confidence 568888877743 2234555554333 223322 211223334678999999986321 223332221
Q ss_pred HHhcCCcEEEEe-cc
Q 022631 155 LSEVNVDFILLA-GY 168 (294)
Q Consensus 155 L~~~~~DliV~a-gy 168 (294)
-..+|+||.+ ..
T Consensus 73 --~~~~DlIi~md~~ 85 (134)
T 2l17_A 73 --ADDYDVVISLCGC 85 (134)
T ss_dssp --GGGCSEEEECSCS
T ss_pred --hccCCEEEEeCch
Confidence 1368999988 44
No 106
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=46.65 E-value=63 Score=25.93 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=42.6
Q ss_pred ceeEEEEEeCCc--hH-HHHHHHHHHcCCCCceEEEEec-----CCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 80 KKNLAVFVSGGG--SN-FRSIHAACLAGSVYGDVVVLVT-----NKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 80 ~~rIaVl~SG~g--s~-l~~ll~~~~~~~~~~eI~~Vvt-----~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
++||.++++|+- |- .++++.+.. +. .+|.--=| ++.+....+.++++||++-. ..++.+.+..+
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~~l~e~Gid~~~-----~~ar~l~~~~~ 79 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL-PS--KKINSAGVGALVDHTADESAIRVAEKNGLCLKG-----HRGTKFTSALA 79 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TT--SEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTT-----CCCCBCCHHHH
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc-CC--CEEEeccccCCCCCCCCHHHHHHHHHcCCCccC-----CcccCCCHHHh
Confidence 568888888844 22 445555443 22 34432222 12233467889999998631 12344443322
Q ss_pred HHHHHhcCCcEEEEeccc
Q 022631 152 VAALSEVNVDFILLAGYL 169 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~ 169 (294)
..+|+||...-.
T Consensus 80 ------~~~DlIi~m~~~ 91 (150)
T 2wmy_A 80 ------RQYDLLLVMEYS 91 (150)
T ss_dssp ------TTCSEEEESCHH
T ss_pred ------ccCCEEEEcCHH
Confidence 368999988654
No 107
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=46.02 E-value=25 Score=32.08 Aligned_cols=35 Identities=6% Similarity=-0.109 Sum_probs=17.8
Q ss_pred CceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecC
Q 022631 79 KKKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTN 116 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~ 116 (294)
++.||+|+..| .--+. .+..+ ......++++|...
T Consensus 4 ~~~rvgiiG~G--~~g~~~~~~~l-~~~~~~~l~av~d~ 39 (358)
T 3gdo_A 4 DTIKVGILGYG--LSGSVFHGPLL-DVLDEYQISKIMTS 39 (358)
T ss_dssp TCEEEEEECCS--HHHHHTTHHHH-TTCTTEEEEEEECS
T ss_pred CcceEEEEccC--HHHHHHHHHHH-hhCCCeEEEEEEcC
Confidence 35788888444 33232 22222 22224688877654
No 108
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=45.30 E-value=1.1e+02 Score=26.97 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=55.2
Q ss_pred ceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCC---CCCC------
Q 022631 80 KKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEP---NGLS------ 147 (294)
Q Consensus 80 ~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~---~~~~------ 147 (294)
++||.++..++.+. +..|..++.+. .++|..+ |.. ...+...+.|++++.++...... ....
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~--GheV~v~-~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARR--GHRITYV-TTP---LFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEE-ECH---HHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhC--CCEEEEE-cCH---HHHHHHHHcCCEEEecccccccccccccccccchHH
Confidence 45888876664433 33444554433 3566544 432 24566778899988876310000 0000
Q ss_pred -------------hhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCC
Q 022631 148 -------------PNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 148 -------------d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
-.++.+.+++++||+||+-++.-.....+-+...-.++-+-+++
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~ 134 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGF 134 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEeccc
Confidence 13566777889999999762322222222223333455554444
No 109
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=44.26 E-value=24 Score=32.27 Aligned_cols=43 Identities=21% Similarity=0.151 Sum_probs=26.5
Q ss_pred EecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEecc
Q 022631 113 LVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 113 Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy 168 (294)
.|+++......++|+++|+|..+- ++-+.|+.-++|+++++.-
T Consensus 50 av~~~~~~~a~~~a~~~~~~~~~~-------------~~~~ll~~~~iD~V~i~tp 92 (383)
T 3oqb_A 50 ILVGRSAEKVEALAKRFNIARWTT-------------DLDAALADKNDTMFFDAAT 92 (383)
T ss_dssp EEECSSSHHHHHHHHHTTCCCEES-------------CHHHHHHCSSCCEEEECSC
T ss_pred EEEcCCHHHHHHHHHHhCCCcccC-------------CHHHHhcCCCCCEEEECCC
Confidence 355554444568899999974321 2334555667888877654
No 110
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=43.59 E-value=69 Score=30.33 Aligned_cols=57 Identities=16% Similarity=0.046 Sum_probs=34.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFP 137 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~ 137 (294)
++||+||.+. ||--...++-+....-.++++++.++..-....+.|+++++..+.+.
T Consensus 4 m~rI~ILGsT-GSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~ 60 (388)
T 1r0k_A 4 PRTVTVLGAT-GSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIA 60 (388)
T ss_dssp CEEEEEETTT-SHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEES
T ss_pred ceEEEEECCC-eEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEc
Confidence 4899999541 44444444444433223677777676543345678899999877654
No 111
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=43.19 E-value=60 Score=26.76 Aligned_cols=76 Identities=16% Similarity=0.009 Sum_probs=42.3
Q ss_pred ceeEEEEEeCCc--hH-HHHHHHHHHcCCCCceEEEEec-----CCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 80 KKNLAVFVSGGG--SN-FRSIHAACLAGSVYGDVVVLVT-----NKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 80 ~~rIaVl~SG~g--s~-l~~ll~~~~~~~~~~eI~~Vvt-----~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
++||.++++|+- |- .++++.... +. .+|.---| .+.+....+.++++||++-. ..++.+.+.++
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~-----~~sr~l~~~~~ 93 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYH-PE--LKVESAGLGALVGKGADPTAISVAAEHQLSLEG-----HCARQISRRLC 93 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC-TT--CEEEEEETTCCTTCCCCHHHHHHHHHTTCCCTT-----CCCCBCCHHHH
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhc-CC--eEEEeeecCCCCCCCCCHHHHHHHHHcCCCccC-----CcCccCCHHHh
Confidence 468888888844 22 445555443 22 34422222 12333467889999998631 12344444332
Q ss_pred HHHHHhcCCcEEEEeccc
Q 022631 152 VAALSEVNVDFILLAGYL 169 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~ 169 (294)
..+|+||...-.
T Consensus 94 ------~~~DlIitM~~~ 105 (167)
T 2fek_A 94 ------RNYDLILTMEKR 105 (167)
T ss_dssp ------HHSSEEEESCHH
T ss_pred ------ccCCEEEEcCHH
Confidence 258999988653
No 112
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=43.01 E-value=33 Score=30.51 Aligned_cols=38 Identities=11% Similarity=0.157 Sum_probs=24.4
Q ss_pred HHHHHHHhcCCcEEEEeccc-cccChhHHhcCCCCEEEE
Q 022631 150 DLVAALSEVNVDFILLAGYL-KLIPMELIRAYPRSIVNI 187 (294)
Q Consensus 150 ~l~~~L~~~~~DliV~agy~-~ilp~~~l~~~~~g~iNi 187 (294)
+..+.|++.++|++|++... ...=+++-+.++..+|++
T Consensus 90 ~~~~~L~~~Gad~IVIaCNTah~~l~~lr~~~~iPvigi 128 (268)
T 3s81_A 90 RYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISI 128 (268)
T ss_dssp HHHHHHHHTTCSEEECSCSGGGGGHHHHHHHCSSEEECH
T ss_pred HHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHCCCCEEcc
Confidence 45567888999999998764 332234555555556653
No 113
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=42.68 E-value=27 Score=32.64 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=35.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC-------C-------ccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD-------C-------GGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~-------~-------~~~~~A~~~gIP~~~~~~ 138 (294)
..||+|.+|||--..-++......| .+|.+|..+... | .+.++|+++|||++.++-
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G---~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~ 78 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQG---YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNF 78 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTT---CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcC---CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 5699999999653332222222233 578777765321 1 245789999999988763
No 114
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=42.02 E-value=66 Score=28.47 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=43.4
Q ss_pred eeEEEEEeCC-chHHHHHHHHHHcCCCCceEEEEecCCCCCcc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 81 KNLAVFVSGG-GSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 81 ~rIaVl~SG~-gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
++|. +.|+ |..-+.|.+.+.... ++|.++.-+....+. .+.....++.++..+-. +.+++.+.+
T Consensus 11 ~~Il--VtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~-------d~~~l~~~~ 79 (346)
T 3i6i_A 11 GRVL--IAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN-------EQEAMEKIL 79 (346)
T ss_dssp CCEE--EECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT-------CHHHHHHHH
T ss_pred CeEE--EECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC-------CHHHHHHHH
Confidence 4544 4453 555566666665432 567666544322111 11223567887776532 245677788
Q ss_pred HhcCCcEEEEecc
Q 022631 156 SEVNVDFILLAGY 168 (294)
Q Consensus 156 ~~~~~DliV~agy 168 (294)
++.++|.+|...-
T Consensus 80 ~~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 80 KEHEIDIVVSTVG 92 (346)
T ss_dssp HHTTCCEEEECCC
T ss_pred hhCCCCEEEECCc
Confidence 8778999887654
No 115
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=41.20 E-value=74 Score=28.92 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=17.6
Q ss_pred CceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecC
Q 022631 79 KKKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTN 116 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~ 116 (294)
++.||+|+..| .--+. .+..+.. ....++++|+..
T Consensus 6 ~~~rvgiiG~G--~~g~~~~~~~l~~-~~~~~l~av~d~ 41 (364)
T 3e82_A 6 NTINIALIGYG--FVGKTFHAPLIRS-VPGLNLAFVASR 41 (364)
T ss_dssp -CEEEEEECCS--HHHHHTHHHHHHT-STTEEEEEEECS
T ss_pred CcceEEEECCC--HHHHHHHHHHHhh-CCCeEEEEEEcC
Confidence 46788888444 33232 2222222 224678877654
No 116
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=40.96 E-value=39 Score=32.21 Aligned_cols=86 Identities=13% Similarity=0.011 Sum_probs=47.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEec-CCCCCccHHHHHhCCCCEEEcCCCCC----CCCCC-ChhHHHH
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVT-NKPDCGGAEYARDNSIPVILFPKTKD----EPNGL-SPNDLVA 153 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt-~~~~~~~~~~A~~~gIP~~~~~~~~~----~~~~~-~d~~l~~ 153 (294)
++||+||.|. ||--.+-++-+++..-.++|+++.. ++.-.-..+.|++++-.++.+.+... ..+-. -.+.+.+
T Consensus 21 mk~i~ILGST-GSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~l~~ 99 (398)
T 2y1e_A 21 RLRVVVLGST-GSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATR 99 (398)
T ss_dssp CEEEEEESTT-SHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTHHHH
T ss_pred ceEEEEEccC-cHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHHHHH
Confidence 5788888554 5544444454444333578888877 43322345777777777665532110 00000 1345556
Q ss_pred HHHhcCCcEEEEe
Q 022631 154 ALSEVNVDFILLA 166 (294)
Q Consensus 154 ~L~~~~~DliV~a 166 (294)
.....++|+++.+
T Consensus 100 ~a~~~~~D~Vv~A 112 (398)
T 2y1e_A 100 LVEQTEADVVLNA 112 (398)
T ss_dssp HHHHSCCSEEEEC
T ss_pred HhcCCCCCEEEEe
Confidence 5555568988865
No 117
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=40.77 E-value=34 Score=31.65 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=27.9
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC 120 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~ 120 (294)
+.+||++| |||+.+..++...+.- ..++.+|||--++.
T Consensus 3 ~~~~IV~i--gGGtGl~~ll~gLk~~--~~~iTaIVtvaDDG 40 (326)
T 2q7x_A 3 RXPXITVI--GGGTGSPVILXSLREX--DVEIAAIVTVADDG 40 (326)
T ss_dssp CCCEEEEE--CCCTTHHHHHHHHHHS--SCEEEEEECCBSCG
T ss_pred CCCeEEEE--cCcccHHHHHHHhccC--CCCeEEEEECccCC
Confidence 35677777 6678888888877643 56899999976663
No 118
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=40.77 E-value=1.2e+02 Score=25.93 Aligned_cols=107 Identities=14% Similarity=0.088 Sum_probs=61.5
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHc-CCCCceEEEEecCCCCC------ccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLA-GSVYGDVVVLVTNKPDC------GGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~-~~~~~eI~~Vvt~~~~~------~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
...+|.|-+.|+....+++-.+... .....++.++-...+.. ...+.+++.|+++...-.. +.-.+++
T Consensus 169 ~~~~Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-----g~~~~~I 243 (294)
T 3loq_A 169 LFDRVLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIES-----GTPHKAI 243 (294)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC-----SCHHHHH
T ss_pred cCCEEEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEec-----CCHHHHH
Confidence 3578888877766555544333211 11123444433332221 2346777889985432211 1124678
Q ss_pred HHHHHhcCCcEEEEeccccc---------cChhHHhcCCCCEEEEcCC
Q 022631 152 VAALSEVNVDFILLAGYLKL---------IPMELIRAYPRSIVNIHPS 190 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~~i---------lp~~~l~~~~~g~iNiHPS 190 (294)
++..++.++|++|+..+++- ...+++...+..++-+|+.
T Consensus 244 ~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 244 LAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEEEECSC
T ss_pred HHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEEEECCC
Confidence 88889999999999887652 2345566666667777664
No 119
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=40.74 E-value=1.1e+02 Score=22.74 Aligned_cols=73 Identities=11% Similarity=-0.033 Sum_probs=35.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
.++|+|+ |.|..-..+...+... ..+|.++ . +......+++++.|+.++..+.. +.+.+....-.+
T Consensus 4 ~m~i~Ii--G~G~iG~~~a~~L~~~--g~~v~~~-d-~~~~~~~~~~~~~~~~~~~~d~~--------~~~~l~~~~~~~ 69 (140)
T 1lss_A 4 GMYIIIA--GIGRVGYTLAKSLSEK--GHDIVLI-D-IDKDICKKASAEIDALVINGDCT--------KIKTLEDAGIED 69 (140)
T ss_dssp -CEEEEE--CCSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHCSSEEEESCTT--------SHHHHHHTTTTT
T ss_pred CCEEEEE--CCCHHHHHHHHHHHhC--CCeEEEE-E-CCHHHHHHHHHhcCcEEEEcCCC--------CHHHHHHcCccc
Confidence 3567766 6565555555555443 2455544 2 22222334445568776543321 223332222236
Q ss_pred CcEEEEe
Q 022631 160 VDFILLA 166 (294)
Q Consensus 160 ~DliV~a 166 (294)
+|++|++
T Consensus 70 ~d~vi~~ 76 (140)
T 1lss_A 70 ADMYIAV 76 (140)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 8988876
No 120
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=40.62 E-value=1e+02 Score=23.89 Aligned_cols=76 Identities=14% Similarity=0.003 Sum_probs=39.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC-CccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD-CGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~-~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
+.++.|+ |.|..-+.+...+... ..+|++|-.++++ +...+.....|+.++..+. .+.+.++...-.
T Consensus 3 ~~~vlI~--G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~--------~~~~~l~~a~i~ 70 (153)
T 1id1_A 3 KDHFIVC--GHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDS--------NDSSVLKKAGID 70 (153)
T ss_dssp CSCEEEE--CCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCT--------TSHHHHHHHTTT
T ss_pred CCcEEEE--CCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCC--------CCHHHHHHcChh
Confidence 4566666 6676666666665543 2456555332211 1111122245788776542 234555444334
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
+.|++|++-
T Consensus 71 ~ad~vi~~~ 79 (153)
T 1id1_A 71 RCRAILALS 79 (153)
T ss_dssp TCSEEEECS
T ss_pred hCCEEEEec
Confidence 788888763
No 121
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=40.55 E-value=64 Score=31.00 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=39.4
Q ss_pred CCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHH
Q 022631 77 GIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALS 156 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~ 156 (294)
..+.+||+|+ |.|..-+.+..++.... ..+| +|.++......+++++.++.++.++-. +.+++.+.++
T Consensus 20 ~l~~k~VlIi--GAGgiG~aia~~L~~~~-g~~V--~v~~R~~~ka~~la~~~~~~~~~~D~~-------d~~~l~~~l~ 87 (467)
T 2axq_A 20 RHMGKNVLLL--GSGFVAQPVIDTLAAND-DINV--TVACRTLANAQALAKPSGSKAISLDVT-------DDSALDKVLA 87 (467)
T ss_dssp ---CEEEEEE--CCSTTHHHHHHHHHTST-TEEE--EEEESSHHHHHHHHGGGTCEEEECCTT-------CHHHHHHHHH
T ss_pred CCCCCEEEEE--CChHHHHHHHHHHHhCC-CCeE--EEEECCHHHHHHHHHhcCCcEEEEecC-------CHHHHHHHHc
Confidence 3345677777 55555666666655421 2343 344443333345555556655544321 1234555554
Q ss_pred hcCCcEEEEec
Q 022631 157 EVNVDFILLAG 167 (294)
Q Consensus 157 ~~~~DliV~ag 167 (294)
++|++|.+.
T Consensus 88 --~~DvVIn~t 96 (467)
T 2axq_A 88 --DNDVVISLI 96 (467)
T ss_dssp --TSSEEEECS
T ss_pred --CCCEEEECC
Confidence 789988764
No 122
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=40.31 E-value=68 Score=29.69 Aligned_cols=56 Identities=20% Similarity=0.286 Sum_probs=37.3
Q ss_pred HHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEecc------------------ccccChhHHhcC-CCCE
Q 022631 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGY------------------LKLIPMELIRAY-PRSI 184 (294)
Q Consensus 124 ~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy------------------~~ilp~~~l~~~-~~g~ 184 (294)
+.|++.|..+....+ +.+.+ .+.|+|..-.| ...|..++++.. +-.+
T Consensus 203 ~~a~~~G~~v~~~~d------------~~eav--~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~a 268 (333)
T 1duv_G 203 ALAQQNGGNITLTED------------VAKGV--EGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEV 268 (333)
T ss_dssp HHHHHTTCEEEEESC------------HHHHH--TTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTC
T ss_pred HHHHHcCCeEEEEEC------------HHHHh--CCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCc
Confidence 455577866554321 22333 26788887666 346888899888 7789
Q ss_pred EEEcCCCCCCC
Q 022631 185 VNIHPSLLPAF 195 (294)
Q Consensus 185 iNiHPSlLP~y 195 (294)
+-+|| ||.+
T Consensus 269 i~mHc--LP~~ 277 (333)
T 1duv_G 269 KFLHC--LPAF 277 (333)
T ss_dssp EEEEC--SCCC
T ss_pred EEECC--CCCC
Confidence 99998 5777
No 123
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=40.12 E-value=1.1e+02 Score=26.87 Aligned_cols=49 Identities=12% Similarity=-0.023 Sum_probs=27.0
Q ss_pred ceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 80 KKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
+.||+|+.. |.--+. ++..+.. ....++++|+... .....+++++.|++
T Consensus 5 ~~~vgiiG~--G~~g~~~~~~~l~~-~~~~~lvav~d~~-~~~~~~~~~~~g~~ 54 (319)
T 1tlt_A 5 KLRIGVVGL--GGIAQKAWLPVLAA-ASDWTLQGAWSPT-RAKALPICESWRIP 54 (319)
T ss_dssp CEEEEEECC--STHHHHTHHHHHHS-CSSEEEEEEECSS-CTTHHHHHHHHTCC
T ss_pred cceEEEECC--CHHHHHHHHHHHHh-CCCeEEEEEECCC-HHHHHHHHHHcCCC
Confidence 567777744 433332 4444432 1245777666533 33455678888887
No 124
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=40.07 E-value=37 Score=32.91 Aligned_cols=56 Identities=11% Similarity=-0.044 Sum_probs=34.6
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC------CccHHHHHhCCC-CEEEcC
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD------CGGAEYARDNSI-PVILFP 137 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~------~~~~~~A~~~gI-P~~~~~ 137 (294)
+..||+|.+|||--..-.+.-.... ..+|++|..+... ..+.+.|++.|| |+++++
T Consensus 9 ~~~KVvVA~SGGlDSSvll~~L~e~---G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD 71 (455)
T 1k92_A 9 VGQRIGIAFSGGLDTSAALLWMRQK---GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLID 71 (455)
T ss_dssp TTSEEEEECCSSHHHHHHHHHHHHT---TCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEE
T ss_pred CCCeEEEEEcChHHHHHHHHHHHHc---CCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 4679999999965222222111122 3578777665432 236789999999 777765
No 125
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=39.78 E-value=39 Score=30.07 Aligned_cols=49 Identities=8% Similarity=-0.050 Sum_probs=26.8
Q ss_pred ceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCE
Q 022631 80 KKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPV 133 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~ 133 (294)
+.||+|+.. |.--+ ..+..+... ...+++ |+++......++|+++|++.
T Consensus 2 ~~~igiIG~--G~ig~~~~~~~l~~~-~~~~l~--v~d~~~~~~~~~a~~~g~~~ 51 (323)
T 1xea_A 2 SLKIAMIGL--GDIAQKAYLPVLAQW-PDIELV--LCTRNPKVLGTLATRYRVSA 51 (323)
T ss_dssp CEEEEEECC--CHHHHHTHHHHHTTS-TTEEEE--EECSCHHHHHHHHHHTTCCC
T ss_pred CcEEEEECC--CHHHHHHHHHHHHhC-CCceEE--EEeCCHHHHHHHHHHcCCCc
Confidence 468888843 33223 244444321 135665 55554434557888888874
No 126
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=39.64 E-value=1.1e+02 Score=24.10 Aligned_cols=88 Identities=19% Similarity=0.205 Sum_probs=47.4
Q ss_pred CCCceeEEEEEeCCchHHHHHHHHHH-cCCCCceEEEE--ec-CCCCC------------------------ccHHHHHh
Q 022631 77 GIKKKNLAVFVSGGGSNFRSIHAACL-AGSVYGDVVVL--VT-NKPDC------------------------GGAEYARD 128 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~l~~ll~~~~-~~~~~~eI~~V--vt-~~~~~------------------------~~~~~A~~ 128 (294)
..+.+||.|-+.|+.....++-.+.. .. ...++.+| -. +.+.. ...+.+.+
T Consensus 14 ~~~~~~ILv~vD~s~~s~~al~~A~~lA~-~~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 92 (163)
T 1tq8_A 14 LSAYKTVVVGTDGSDSSMRAVDRAAQIAG-ADAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHN 92 (163)
T ss_dssp CCCCCEEEEECCSSHHHHHHHHHHHHHHT-TTSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHT
T ss_pred cccCCEEEEEcCCCHHHHHHHHHHHHHhC-CCCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777777776665555544322 22 34566555 21 11100 01244566
Q ss_pred CCCC-EEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEecccc
Q 022631 129 NSIP-VILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLK 170 (294)
Q Consensus 129 ~gIP-~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy~~ 170 (294)
.|++ +...-... .-.+++++..++.++|+||+...++
T Consensus 93 ~gv~~v~~~v~~G-----~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 93 AGAKNVEERPIVG-----APVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp TTCCEEEEEEECS-----SHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred cCCCeEEEEEecC-----CHHHHHHHHHHhcCCCEEEECCCCC
Confidence 7888 53321111 1246788888889999999877644
No 127
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=39.36 E-value=31 Score=33.67 Aligned_cols=77 Identities=22% Similarity=0.031 Sum_probs=35.5
Q ss_pred cccceeeeecCcccccCCCCcceeeecCCCCceeEEEEEeCCchHHHHHHHHHHc---CCCCceEEEEecCCCCCccHHH
Q 022631 49 RSSRRLECVNFAEKVKNNGDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLA---GSVYGDVVVLVTNKPDCGGAEY 125 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~---~~~~~eI~~Vvt~~~~~~~~~~ 125 (294)
+.+|.-.|-+|--+..+.. +++||+||.|. ||--..-++-++. ..-.++|+++..++.-.-..+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~-----------~mk~I~ILGST-GSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ 124 (488)
T 3au8_A 57 RCKRIKLCKKDLIDIGAIK-----------KPINVAIFGST-GSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQ 124 (488)
T ss_dssp -------------------------------CEEEEEETTT-SHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHH
T ss_pred ceEEEEeccccchhhhhhh-----------cceEEEEEccC-cHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHH
Confidence 3466777877765554432 36889999654 4443333333333 1125789988886433345678
Q ss_pred HHhCCCCEEEcC
Q 022631 126 ARDNSIPVILFP 137 (294)
Q Consensus 126 A~~~gIP~~~~~ 137 (294)
|++++-.++.+.
T Consensus 125 ~~ef~P~~v~v~ 136 (488)
T 3au8_A 125 AREFLPEYLCIH 136 (488)
T ss_dssp HHHHCCSEEEES
T ss_pred HHHcCCCEEEEc
Confidence 888888877664
No 128
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=38.91 E-value=74 Score=27.67 Aligned_cols=42 Identities=12% Similarity=-0.006 Sum_probs=27.0
Q ss_pred hHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCCC
Q 022631 149 NDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLL 192 (294)
Q Consensus 149 ~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSlL 192 (294)
..+.+.+++.++|++++.++...+.. ......+++.+|....
T Consensus 74 ~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~~~~~pv~~~h~~~~ 115 (342)
T 2iuy_A 74 EEIERWLRTADVDVVHDHSGGVIGPA--GLPPGTAFISSHHFTT 115 (342)
T ss_dssp HHHHHHHHHCCCSEEEECSSSSSCST--TCCTTCEEEEEECSSS
T ss_pred HHHHHHHHhcCCCEEEECCchhhHHH--HhhcCCCEEEecCCCC
Confidence 36788889999999998876433322 1111222788887753
No 129
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=38.24 E-value=56 Score=26.47 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=41.2
Q ss_pred CCCceeEEEEEeCCc--hH-HHHHHHHHHcCCCCceEEEEecCC---CCCccHHHHHhCCCCEEEcCCCCCCCCCCChhH
Q 022631 77 GIKKKNLAVFVSGGG--SN-FRSIHAACLAGSVYGDVVVLVTNK---PDCGGAEYARDNSIPVILFPKTKDEPNGLSPND 150 (294)
Q Consensus 77 ~~~~~rIaVl~SG~g--s~-l~~ll~~~~~~~~~~eI~~Vvt~~---~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~ 150 (294)
+.+++||.+++.|+- |- .++++.....+ ..+|.--=+.+ .+....+.++++||++-. ..++.+.+..
T Consensus 17 ~~~~~~VLFVC~gN~cRSpmAEal~~~~~~~--~~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~-----h~ar~l~~~~ 89 (148)
T 3rh0_A 17 GSHMKSVLFVCVGNGGKSQMAAALAQKYASD--SVEIHSAGTKPAQGLNQLSVESIAEVGADMSQ-----GIPKAIDPEL 89 (148)
T ss_dssp ---CCEEEEEESSSSSHHHHHHHHHHHHCCT--TSEEEEEESSCCSSCCHHHHHHHHHTTCCCTT-----CCCCBCCHHH
T ss_pred cCCCCEEEEECCCchhHHHHHHHHHHHhcCC--CEEEEecccCCCCCCCHHHHHHHHHcCCCcCC-----CeeeECCHHH
Confidence 444778888887743 32 34555554333 23442222222 233467889999998531 1234444433
Q ss_pred HHHHHHhcCCcEEEEec
Q 022631 151 LVAALSEVNVDFILLAG 167 (294)
Q Consensus 151 l~~~L~~~~~DliV~ag 167 (294)
+ ..+|+||.+.
T Consensus 90 ~------~~~DlIitM~ 100 (148)
T 3rh0_A 90 L------RTVDRVVILG 100 (148)
T ss_dssp H------HHCSEEEEES
T ss_pred h------cCCCEEEEec
Confidence 2 2589999873
No 130
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=37.68 E-value=1.3e+02 Score=28.20 Aligned_cols=81 Identities=9% Similarity=-0.045 Sum_probs=46.2
Q ss_pred CCCceeEEEEEeCC--c---hHHHHHHHH--HHcCCCCceEEEEecCCCC-CccHHHHHhCCCCEEEcCCCCCCCCCCCh
Q 022631 77 GIKKKNLAVFVSGG--G---SNFRSIHAA--CLAGSVYGDVVVLVTNKPD-CGGAEYARDNSIPVILFPKTKDEPNGLSP 148 (294)
Q Consensus 77 ~~~~~rIaVl~SG~--g---s~l~~ll~~--~~~~~~~~eI~~Vvt~~~~-~~~~~~A~~~gIP~~~~~~~~~~~~~~~d 148 (294)
+.+++||+++.+.- + ..+..++.. .... .++|.++....+. ....+..+..+ .+..+. ....
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~ 271 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQP--DLQMHLFATSGDDGSTLRTRLAQAS-TLHDVT-------ALGH 271 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCT--TEEEEEEESSCCCSCHHHHHHHHTS-EEEECT-------TCCH
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcc--cEEEEEEECCCCCccHHHHHHHhcC-eEEECC-------CCCH
Confidence 45678999987652 1 234455555 3322 4677655443321 22334445555 443332 1235
Q ss_pred hHHHHHHHhcCCcEEEEec
Q 022631 149 NDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 149 ~~l~~~L~~~~~DliV~ag 167 (294)
..+.+.+++.++|+++...
T Consensus 272 ~~l~~~i~~~~~Div~~~~ 290 (568)
T 2vsy_A 272 LATAKHIRHHGIDLLFDLR 290 (568)
T ss_dssp HHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHhCCCCEEEECC
Confidence 6788899999999998653
No 131
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=37.61 E-value=83 Score=27.97 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=29.3
Q ss_pred eeEEEEEeCCchHH---HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEc
Q 022631 81 KNLAVFVSGGGSNF---RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILF 136 (294)
Q Consensus 81 ~rIaVl~SG~gs~l---~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~ 136 (294)
+||++++.++.+.+ ..|..++... .++|..+ +.. ...+.....|++++.+
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~--GheV~v~-~~~---~~~~~~~~~g~~~~~~ 54 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQAS--GHEVLIA-APP---ELQATAHGAGLTTAGI 54 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHT--TCEEEEE-ECH---HHHHHHHHBTCEEEEC
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHC--CCEEEEe-cCh---hhHHHHHhCCCceeee
Confidence 57887765544432 4455555543 2466544 421 2345677889998877
No 132
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=37.32 E-value=41 Score=31.42 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=38.2
Q ss_pred eeEEEEEeCCchHHHHHHHHHHcCCCC-ceEEEEecCCCCCccHHHHHhC------CCCEEEcCCCCCCCCCCChhHHHH
Q 022631 81 KNLAVFVSGGGSNFRSIHAACLAGSVY-GDVVVLVTNKPDCGGAEYARDN------SIPVILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~~ll~~~~~~~~~-~eI~~Vvt~~~~~~~~~~A~~~------gIP~~~~~~~~~~~~~~~d~~l~~ 153 (294)
+||+|+ |.|..-+.+...+....-. .+|+ ++++......+++++. ++..+.++-. +.+++.+
T Consensus 2 ~kVlIi--GaGgiG~~ia~~L~~~g~~~~~V~--v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~-------d~~~l~~ 70 (405)
T 4ina_A 2 AKVLQI--GAGGVGGVVAHKMAMNREVFSHIT--LASRTLSKCQEIAQSIKAKGYGEIDITTVDAD-------SIEELVA 70 (405)
T ss_dssp CEEEEE--CCSHHHHHHHHHHHTCTTTCCEEE--EEESCHHHHHHHHHHHHHTTCCCCEEEECCTT-------CHHHHHH
T ss_pred CEEEEE--CCCHHHHHHHHHHHhCCCCceEEE--EEECCHHHHHHHHHHhhhhcCCceEEEEecCC-------CHHHHHH
Confidence 577777 5555555666665442111 1343 2333222233444432 3555554421 2356667
Q ss_pred HHHhcCCcEEEEe
Q 022631 154 ALSEVNVDFILLA 166 (294)
Q Consensus 154 ~L~~~~~DliV~a 166 (294)
.+++.++|++|.+
T Consensus 71 ~l~~~~~DvVin~ 83 (405)
T 4ina_A 71 LINEVKPQIVLNI 83 (405)
T ss_dssp HHHHHCCSEEEEC
T ss_pred HHHhhCCCEEEEC
Confidence 7777788988865
No 133
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=37.27 E-value=87 Score=25.90 Aligned_cols=71 Identities=13% Similarity=0.188 Sum_probs=37.2
Q ss_pred eEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCc
Q 022631 82 NLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVD 161 (294)
Q Consensus 82 rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~D 161 (294)
||.|+ |.|..-..+...+... ..+++++-.+ .....+++++.|++++..+.+ +.+.++...-.++|
T Consensus 2 ~iiIi--G~G~~G~~la~~L~~~--g~~v~vid~~--~~~~~~l~~~~~~~~i~gd~~--------~~~~l~~a~i~~ad 67 (218)
T 3l4b_C 2 KVIII--GGETTAYYLARSMLSR--KYGVVIINKD--RELCEEFAKKLKATIIHGDGS--------HKEILRDAEVSKND 67 (218)
T ss_dssp CEEEE--CCHHHHHHHHHHHHHT--TCCEEEEESC--HHHHHHHHHHSSSEEEESCTT--------SHHHHHHHTCCTTC
T ss_pred EEEEE--CCCHHHHHHHHHHHhC--CCeEEEEECC--HHHHHHHHHHcCCeEEEcCCC--------CHHHHHhcCcccCC
Confidence 45555 6666656666655443 2455544322 222345566678887765432 33444443334677
Q ss_pred EEEEe
Q 022631 162 FILLA 166 (294)
Q Consensus 162 liV~a 166 (294)
++|++
T Consensus 68 ~vi~~ 72 (218)
T 3l4b_C 68 VVVIL 72 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77665
No 134
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=37.07 E-value=1.1e+02 Score=27.40 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=19.4
Q ss_pred CceeEEEEEeCCchHHH-HHHHHHHcCCCCceEEEEecCC
Q 022631 79 KKKNLAVFVSGGGSNFR-SIHAACLAGSVYGDVVVLVTNK 117 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~-~ll~~~~~~~~~~eI~~Vvt~~ 117 (294)
++.||+|+ |.|.--+ ..+.++..- ...++++|....
T Consensus 24 ~~~rvgii--G~G~ig~~~~~~~l~~~-~~~~lvav~d~~ 60 (330)
T 4ew6_A 24 SPINLAIV--GVGKIVRDQHLPSIAKN-ANFKLVATASRH 60 (330)
T ss_dssp CCEEEEEE--CCSHHHHHTHHHHHHHC-TTEEEEEEECSS
T ss_pred CCceEEEE--ecCHHHHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 35677777 4444333 234444332 247888887644
No 135
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=36.90 E-value=66 Score=29.81 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=27.2
Q ss_pred CCcEEEEecc------------------ccccChhHHhcC-CCCEEEEcCCCCCCC
Q 022631 159 NVDFILLAGY------------------LKLIPMELIRAY-PRSIVNIHPSLLPAF 195 (294)
Q Consensus 159 ~~DliV~agy------------------~~ilp~~~l~~~-~~g~iNiHPSlLP~y 195 (294)
+.|++..-.| .+.|..++++.. +-.++-+|| ||.+
T Consensus 224 ~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 224 GVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp TCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred CCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECC--CCCC
Confidence 6788887666 346888899888 768999998 5776
No 136
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=36.72 E-value=51 Score=29.61 Aligned_cols=90 Identities=17% Similarity=0.087 Sum_probs=49.5
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHc-CCCCce-EEEEecCCCCC--------ccHHHHHhCCCCEEEcCCCCCC---CCCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLA-GSVYGD-VVVLVTNKPDC--------GGAEYARDNSIPVILFPKTKDE---PNGL 146 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~-~~~~~e-I~~Vvt~~~~~--------~~~~~A~~~gIP~~~~~~~~~~---~~~~ 146 (294)
..|++|.+|||--.+-.+...... .....+ +.+|..|..-. .+.++|+++|||++.++-.... ....
T Consensus 24 ~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~~~~~~~~ 103 (317)
T 1wy5_A 24 ERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENRM 103 (317)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHTTC
T ss_pred CCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechhhhccCCC
Confidence 468999999966443322222221 223456 77766654321 2568899999998876531100 0001
Q ss_pred Chh---------HHHHHHHhcCCcEEEEeccc
Q 022631 147 SPN---------DLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 147 ~d~---------~l~~~L~~~~~DliV~agy~ 169 (294)
+.+ .+.+..++.+.|.++++...
T Consensus 104 ~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~ 135 (317)
T 1wy5_A 104 SLEEAGRFLRYKFLKEILESEGFDCIATAHHL 135 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCSEEECCCCH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeCch
Confidence 111 23344566789988877553
No 137
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=36.69 E-value=72 Score=29.89 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=26.8
Q ss_pred CCcEEEEecc----------------ccccChhHHhcCC---CCEEEEcCCCCCCC
Q 022631 159 NVDFILLAGY----------------LKLIPMELIRAYP---RSIVNIHPSLLPAF 195 (294)
Q Consensus 159 ~~DliV~agy----------------~~ilp~~~l~~~~---~g~iNiHPSlLP~y 195 (294)
++|+|..-.| .+.|..++++..+ -.++-+|| ||.+
T Consensus 245 ~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 245 GSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp TCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred CCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 6788888666 3567888888777 68999998 4666
No 138
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=36.18 E-value=33 Score=28.04 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=42.5
Q ss_pred CceeEEEEEeCCc--h-HHHHHHHHHHc-CCC--CceEEEEecCC------CCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGG--S-NFRSIHAACLA-GSV--YGDVVVLVTNK------PDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~g--s-~l~~ll~~~~~-~~~--~~eI~~Vvt~~------~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
+++||.++++|+- | -.++++..... ..+ ..+|.--=|.. .+....+.++++||++ .. .++.+
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~~-----~ar~l 76 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQV-DS-----ISRPV 76 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCC-CC-----BCCBC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCC-CC-----eeeEC
Confidence 4688988888854 2 24455554332 111 23332222221 2334678899999997 32 23344
Q ss_pred ChhHHHHHHHhcCCcEEEEeccc
Q 022631 147 SPNDLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~ 169 (294)
.++++ ..+|+||.+.-.
T Consensus 77 ~~~~~------~~~DlIl~Md~~ 93 (161)
T 3jvi_A 77 VSSDF------KNFDYIFAMDND 93 (161)
T ss_dssp CHHHH------HHCSEEEESSHH
T ss_pred CHHHh------cCCCEEEEeChH
Confidence 44332 258999988653
No 139
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=36.17 E-value=37 Score=27.70 Aligned_cols=78 Identities=14% Similarity=0.046 Sum_probs=43.2
Q ss_pred CceeEEEEEeCCc---hHHHHHHHHHHc--CC-CCceEEE-EecC-----CCCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGG---SNFRSIHAACLA--GS-VYGDVVV-LVTN-----KPDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~g---s~l~~ll~~~~~--~~-~~~eI~~-Vvt~-----~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
+++||.++++|+- .-.++|+..... |. -..+|.- .+.. +.+....+.++++||++- . .++.+
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s-~-----~ar~l 76 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP-H-----VARRL 76 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC-C-----CCCBC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc-c-----cccCC
Confidence 3678888888854 224555555432 21 1233322 2222 223346788999999874 2 23344
Q ss_pred ChhHHHHHHHhcCCcEEEEecc
Q 022631 147 SPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy 168 (294)
.+.++ ..+|+||.+.-
T Consensus 77 ~~~~~------~~~DlIi~M~~ 92 (161)
T 2cwd_A 77 TREDV------LAYDHILVMDR 92 (161)
T ss_dssp CHHHH------HHCSEEEESSH
T ss_pred CHhHh------ccCCEEEECCh
Confidence 44332 25899998865
No 140
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=36.01 E-value=63 Score=26.65 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=39.3
Q ss_pred ceeEEEEEeCCc--h-HHHHHHHHHHcCCCCceEEEEec-----CCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 80 KKNLAVFVSGGG--S-NFRSIHAACLAGSVYGDVVVLVT-----NKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 80 ~~rIaVl~SG~g--s-~l~~ll~~~~~~~~~~eI~~Vvt-----~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
++||.++++|+- | -.++++.... +. .+|.---| ++.+....+.++++||++-. ..++.+.+..+
T Consensus 26 m~~VLFVCtgNicRSpmAEal~r~~~-~~--~~v~SAGt~~~~g~~~~p~a~~vl~e~Gid~s~-----~~sr~l~~~~~ 97 (168)
T 2wja_A 26 FDSILVICTGNICRSPIGERLLRRLL-PS--KKINSAGVGALVDHAADESAIRVAEKNGLCLKG-----HRGTKFTSALA 97 (168)
T ss_dssp CSEEEEEESSSSSHHHHHHHHHHHHS-TT--SEEEEEETTCCTTCCCCHHHHHC---CCCCCTT-----CCCCBCCHHHH
T ss_pred cCEEEEEcCCcHHHHHHHHHHHHHhc-CC--eEEEeeecCCCCCCCCCHHHHHHHHHcCCCccc-----CccCCCChhHh
Confidence 468888888844 2 2445555543 22 34432222 12233467889999998631 12344443321
Q ss_pred HHHHHhcCCcEEEEeccc
Q 022631 152 VAALSEVNVDFILLAGYL 169 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~ 169 (294)
..+|+||...-.
T Consensus 98 ------~~~DlIitM~~~ 109 (168)
T 2wja_A 98 ------RQYDLLLVMEYS 109 (168)
T ss_dssp ------TTCSEEEESSHH
T ss_pred ------ccCCEEEEcCHH
Confidence 378999988653
No 141
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=35.82 E-value=1.1e+02 Score=28.78 Aligned_cols=25 Identities=32% Similarity=0.547 Sum_probs=20.2
Q ss_pred cccChhHHhcCCCCEEEEcCCCCCCCC
Q 022631 170 KLIPMELIRAYPRSIVNIHPSLLPAFG 196 (294)
Q Consensus 170 ~ilp~~~l~~~~~g~iNiHPSlLP~yR 196 (294)
..|..++++..+..++-+|| ||.+|
T Consensus 280 y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 280 FQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp CCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred cccCHHHHHhcCCCcEEECC--CCCCC
Confidence 34788888877778999998 58888
No 142
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=35.16 E-value=1.2e+02 Score=27.05 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=37.7
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH---H-
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA---L- 155 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~---L- 155 (294)
+.||+|+..| |.--...+.++... ..++++|+...++. ...+++.+.+-.+- +-+++++. |
T Consensus 3 mirvgiIG~g-G~i~~~h~~~l~~~--~~~lvav~d~~~~~--~~~~~~~~~~~~~~----------~~~~ll~~~~~l~ 67 (318)
T 3oa2_A 3 MKNFALIGAA-GYIAPRHMRAIKDT--GNCLVSAYDINDSV--GIIDSISPQSEFFT----------EFEFFLDHASNLK 67 (318)
T ss_dssp CCEEEEETTT-SSSHHHHHHHHHHT--TCEEEEEECSSCCC--GGGGGTCTTCEEES----------SHHHHHHHHHHHT
T ss_pred ceEEEEECCC-cHHHHHHHHHHHhC--CCEEEEEEcCCHHH--HHHHhhCCCCcEEC----------CHHHHHHhhhhhh
Confidence 6899999553 22222333333332 46888877644443 24455553332221 12344432 2
Q ss_pred --HhcCCcEEEEecc
Q 022631 156 --SEVNVDFILLAGY 168 (294)
Q Consensus 156 --~~~~~DliV~agy 168 (294)
..-++|+++++.-
T Consensus 68 ~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 68 RDSATALDYVSICSP 82 (318)
T ss_dssp TSTTTSCCEEEECSC
T ss_pred hccCCCCcEEEECCC
Confidence 2567898887653
No 143
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=35.08 E-value=39 Score=31.51 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=25.0
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCcc-HHHHHhCCCCE
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG-AEYARDNSIPV 133 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~-~~~A~~~gIP~ 133 (294)
+.+||+|| |||+.+..++...+.- ..++.+|||--++.+. -.+=++.|+|.
T Consensus 9 ~~~kIVvi--gGGtGl~~ll~gLk~~--~~~iTaIVtvaDDGGSSG~lR~~~g~~~ 60 (341)
T 2p0y_A 9 QRPKIVVI--GGGTGLPVVLNGLRKQ--AVDITAVVTVADDGGSSGIIRNYVNVVP 60 (341)
T ss_dssp -CCEEEEE--CCGGGHHHHHHHHHHS--SSEEEEECC-------------------
T ss_pred CCCeEEEE--CCcccHHHHHHHHHhC--CCCeEEEEECCcCCccceeHHhhcCCCC
Confidence 35677777 6788888888887653 5689999997665321 13334455553
No 144
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=34.52 E-value=1.7e+02 Score=25.24 Aligned_cols=77 Identities=12% Similarity=-0.015 Sum_probs=37.6
Q ss_pred ceeEEEEEeCC-chHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHH---HhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 80 KKNLAVFVSGG-GSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYA---RDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 80 ~~rIaVl~SG~-gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A---~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
.+|| |++|+ |..-..+...+... .++|.++.-+.......... ...++.++..+-. +.+.+.+.+
T Consensus 14 ~~~v--lVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------d~~~~~~~~ 82 (335)
T 1rpn_A 14 TRSA--LVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA-------DACSVQRAV 82 (335)
T ss_dssp -CEE--EEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTT-------CHHHHHHHH
T ss_pred CCeE--EEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCC-------CHHHHHHHH
Confidence 5554 55564 44445666665543 24676655433321111111 1224445544321 234566677
Q ss_pred HhcCCcEEEEec
Q 022631 156 SEVNVDFILLAG 167 (294)
Q Consensus 156 ~~~~~DliV~ag 167 (294)
+..++|.+|-..
T Consensus 83 ~~~~~d~Vih~A 94 (335)
T 1rpn_A 83 IKAQPQEVYNLA 94 (335)
T ss_dssp HHHCCSEEEECC
T ss_pred HHcCCCEEEECc
Confidence 777899888654
No 145
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=33.94 E-value=51 Score=30.50 Aligned_cols=38 Identities=32% Similarity=0.445 Sum_probs=27.8
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC 120 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~ 120 (294)
+.+||++| |||+.+..++...+. ...++.+|||--++.
T Consensus 3 ~~~kiv~l--gGGtGl~~ll~gL~~--~~~~iT~IVtv~DdG 40 (323)
T 2o2z_A 3 KKKNVIVF--GGGTGLSVLLRGLKT--FPVSITAIVTVADDG 40 (323)
T ss_dssp CCEEEEEE--ECSHHHHHHHHHHTT--SSEEEEEEECCCCCS
T ss_pred CCCeEEEE--CCcccHHHHHHHHHh--cCCCeEEEEECCcCC
Confidence 35688777 567888888887653 357899999977664
No 146
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=33.45 E-value=39 Score=29.13 Aligned_cols=69 Identities=12% Similarity=0.130 Sum_probs=36.5
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
..|++|+ |.|..-+++..........+++++++.+.++.-. ..-.|+|+... +++.+.+++.
T Consensus 85 ~~rV~II--GAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g---~~i~gv~V~~~------------~dl~eli~~~- 146 (215)
T 2vt3_A 85 MTDVILI--GVGNLGTAFLHYNFTKNNNTKISMAFDINESKIG---TEVGGVPVYNL------------DDLEQHVKDE- 146 (215)
T ss_dssp --CEEEE--CCSHHHHHHHHCC------CCEEEEEESCTTTTT---CEETTEEEEEG------------GGHHHHCSSC-
T ss_pred CCEEEEE--ccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHH---hHhcCCeeech------------hhHHHHHHhC-
Confidence 4677777 5555555555532222335789999987655321 12357787643 2344555554
Q ss_pred CcEEEEec
Q 022631 160 VDFILLAG 167 (294)
Q Consensus 160 ~DliV~ag 167 (294)
|.++++-
T Consensus 147 -D~ViIAv 153 (215)
T 2vt3_A 147 -SVAILTV 153 (215)
T ss_dssp -CEEEECS
T ss_pred -CEEEEec
Confidence 8888773
No 147
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=33.26 E-value=1.1e+02 Score=28.61 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=38.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
+.+|.|+ |.|..-+.+...+... ..++++|=.++ ...+.+++.|++++.-+-+ +.++++...-.+
T Consensus 4 ~~~viIi--G~Gr~G~~va~~L~~~--g~~vvvId~d~---~~v~~~~~~g~~vi~GDat--------~~~~L~~agi~~ 68 (413)
T 3l9w_A 4 GMRVIIA--GFGRFGQITGRLLLSS--GVKMVVLDHDP---DHIETLRKFGMKVFYGDAT--------RMDLLESAGAAK 68 (413)
T ss_dssp CCSEEEE--CCSHHHHHHHHHHHHT--TCCEEEEECCH---HHHHHHHHTTCCCEESCTT--------CHHHHHHTTTTT
T ss_pred CCeEEEE--CCCHHHHHHHHHHHHC--CCCEEEEECCH---HHHHHHHhCCCeEEEcCCC--------CHHHHHhcCCCc
Confidence 3455555 6666666666655543 23555443322 2345667789998876532 234444443345
Q ss_pred CcEEEEe
Q 022631 160 VDFILLA 166 (294)
Q Consensus 160 ~DliV~a 166 (294)
+|++|++
T Consensus 69 A~~viv~ 75 (413)
T 3l9w_A 69 AEVLINA 75 (413)
T ss_dssp CSEEEEC
T ss_pred cCEEEEC
Confidence 5665554
No 148
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=32.68 E-value=1.1e+02 Score=23.74 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=28.1
Q ss_pred HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEeccc
Q 022631 123 AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 123 ~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy~ 169 (294)
.+.+++.|+++...-... .+.-.+++++..++.++|+||+...+
T Consensus 84 ~~~~~~~g~~~~~~~~v~---~G~~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 84 VSIIRKEGAEGEEHLLVR---GKEPPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp HHHHHHTTCCEEEEEEES---SSCHHHHHHHHHHHTTCSEEEEECCE
T ss_pred HHHHHhcCCCceEEEEec---CCCHHHHHHHHHHHcCCCEEEECCCC
Confidence 456777888864311000 01124688888999999999987654
No 149
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=32.23 E-value=43 Score=28.30 Aligned_cols=70 Identities=16% Similarity=0.088 Sum_probs=38.3
Q ss_pred CCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 76 SGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 76 ~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
...++.|++|+.+|. .+..|+ . |.....+.++.++.|..+.......+ +.+++.+.|
T Consensus 26 ~~~~~~rvaIistGd---------El~~G~-~--------Dsn~~~L~~~L~~~G~~v~~~~iv~D-----d~~~I~~al 82 (185)
T 3rfq_A 26 AELVVGRALVVVVDD---------RTAHGD-E--------DHSGPLVTELLTEAGFVVDGVVAVEA-----DEVDIRNAL 82 (185)
T ss_dssp ---CCEEEEEEEECH---------HHHTTC-C--------CSHHHHHHHHHHHTTEEEEEEEEECS-----CHHHHHHHH
T ss_pred cCCCCCEEEEEEECc---------ccCCCC-c--------CcHHHHHHHHHHHCCCEEEEEEEeCC-----CHHHHHHHH
Confidence 444689999999983 222231 0 11111245778888887654432111 124555555
Q ss_pred Hh---cCCcEEEEecc
Q 022631 156 SE---VNVDFILLAGY 168 (294)
Q Consensus 156 ~~---~~~DliV~agy 168 (294)
++ .+.|+||+.|=
T Consensus 83 ~~a~~~~~DlVIttGG 98 (185)
T 3rfq_A 83 NTAVIGGVDLVVSVGG 98 (185)
T ss_dssp HHHHHTTCSEEEEESC
T ss_pred HHHHhCCCCEEEECCC
Confidence 54 36899998873
No 150
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=31.89 E-value=2.6e+02 Score=25.15 Aligned_cols=82 Identities=10% Similarity=0.026 Sum_probs=45.2
Q ss_pred eeEEEEEeCCchHH---HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCC--CCC---CCCCh----
Q 022631 81 KNLAVFVSGGGSNF---RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK--DEP---NGLSP---- 148 (294)
Q Consensus 81 ~rIaVl~SG~gs~l---~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~--~~~---~~~~d---- 148 (294)
+||.++..|+++.+ ..|.+++.+. .++|..+.+ .. ..+...+.|++++.++... ... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~--Gh~V~~~~~-~~---~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL--GVQTRMCAP-PA---AEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQ 74 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT--TCEEEEEEC-GG---GHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC--CCeEEEEeC-HH---HHHHHHHcCCeeeecCCCHHHHHhhccccchhHHHH
Confidence 37888877766553 4455555443 356665544 22 3455667799988776431 000 00000
Q ss_pred -------hHHHHHHH--hcCCcEEEEecc
Q 022631 149 -------NDLVAALS--EVNVDFILLAGY 168 (294)
Q Consensus 149 -------~~l~~~L~--~~~~DliV~agy 168 (294)
.++++.+. ..++|++|+.+|
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~pD~vi~d~~ 103 (416)
T 1rrv_A 75 RLAAMTVEMQFDAVPGAAEGCAAVVAVGD 103 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 23344444 568999998764
No 151
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=31.68 E-value=1.2e+02 Score=24.55 Aligned_cols=81 Identities=16% Similarity=0.164 Sum_probs=40.0
Q ss_pred ceeeecCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChh
Q 022631 70 YEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPN 149 (294)
Q Consensus 70 ~~~~~~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~ 149 (294)
|+.|.+...++.|++|+..|. +... .....|. + .|.....+.++.++.|+.+.....-.+ +.+
T Consensus 5 ~~~h~~~~~~~~~v~iitvsd-~~~~---~~~~~g~----i----~D~ng~~L~~~L~~~G~~v~~~~iV~D-----d~~ 67 (178)
T 3iwt_A 5 HKKHKENAPKSLNFYVITIST-SRYE---KLLKKEP----I----VDESGDIIKQLLIENGHKIIGYSLVPD-----DKI 67 (178)
T ss_dssp --------CCCCEEEEEEECH-HHHH---HHHTTCC----C----CCHHHHHHHHHHHHTTCEEEEEEEECS-----CHH
T ss_pred hhhHHhcCCCCCEEEEEEEcC-CCcc---ccccCCC----C----CcchHHHHHHHHHHCCCEEEEEEEeCC-----CHH
Confidence 566677777789999997762 2222 1122221 1 111112356788889988765432211 124
Q ss_pred HHHHHHH----hcCCcEEEEec
Q 022631 150 DLVAALS----EVNVDFILLAG 167 (294)
Q Consensus 150 ~l~~~L~----~~~~DliV~ag 167 (294)
++.+.++ ..++|+||+.|
T Consensus 68 ~i~~al~~~~a~~~~DlVittG 89 (178)
T 3iwt_A 68 KILKAFTDALSIDEVDVIISTG 89 (178)
T ss_dssp HHHHHHHHHHTCTTCCEEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEecC
Confidence 4555444 34689999887
No 152
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=31.51 E-value=38 Score=27.83 Aligned_cols=66 Identities=17% Similarity=0.191 Sum_probs=35.4
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh-
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE- 157 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~- 157 (294)
++.|++|+.+|. .+..|+ + .|.....+.++.++.|..+.......+ + +++.+.|++
T Consensus 6 ~~~rv~ii~tGd---------El~~G~----i----~Dsn~~~l~~~l~~~G~~v~~~~iv~D-----d-~~i~~al~~a 62 (164)
T 3pzy_A 6 TTRSARVIIAST---------RASSGE----Y----EDRCGPIITEWLAQQGFSSAQPEVVAD-----G-SPVGEALRKA 62 (164)
T ss_dssp -CCEEEEEEECH---------HHHC------------CCHHHHHHHHHHHTTCEECCCEEECS-----S-HHHHHHHHHH
T ss_pred CCCEEEEEEECC---------CCCCCc----e----eeHHHHHHHHHHHHCCCEEEEEEEeCC-----H-HHHHHHHHHH
Confidence 468999999883 222332 2 111112345778888877543321111 2 455555544
Q ss_pred --cCCcEEEEec
Q 022631 158 --VNVDFILLAG 167 (294)
Q Consensus 158 --~~~DliV~ag 167 (294)
.+.|+||+.|
T Consensus 63 ~~~~~DlVittG 74 (164)
T 3pzy_A 63 IDDDVDVILTSG 74 (164)
T ss_dssp HHTTCSEEEEES
T ss_pred HhCCCCEEEECC
Confidence 3689999876
No 153
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=31.35 E-value=26 Score=29.33 Aligned_cols=10 Identities=40% Similarity=0.551 Sum_probs=8.2
Q ss_pred ceeEEEEEeC
Q 022631 80 KKNLAVFVSG 89 (294)
Q Consensus 80 ~~rIaVl~SG 89 (294)
+.|++|+..|
T Consensus 3 ~~~v~IistG 12 (172)
T 3kbq_A 3 AKNASVITVG 12 (172)
T ss_dssp -CEEEEEEEC
T ss_pred CCEEEEEEEc
Confidence 5799999998
No 154
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=31.35 E-value=2e+02 Score=25.82 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=37.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||.|+ |+|..-+.+..+++.- ..++.++-++ ++.+...+|.+ ++..+. .+.+.+++.+++.+
T Consensus 11 ~~~ili~--g~g~~~~~~~~a~~~~--G~~v~~~~~~-~~~~~~~~~d~----~~~~~~-------~d~~~l~~~~~~~~ 74 (391)
T 1kjq_A 11 ATRVMLL--GSGELGKEVAIECQRL--GVEVIAVDRY-ADAPAMHVAHR----SHVINM-------LDGDALRRVVELEK 74 (391)
T ss_dssp CCEEEEE--SCSHHHHHHHHHHHTT--TCEEEEEESS-TTCGGGGGSSE----EEECCT-------TCHHHHHHHHHHHC
T ss_pred CCEEEEE--CCCHHHHHHHHHHHHc--CCEEEEEECC-CCCchhhhccc----eEECCC-------CCHHHHHHHHHHcC
Confidence 5677766 5565556666666543 3466655444 34333333322 222221 12356677777778
Q ss_pred CcEEEE
Q 022631 160 VDFILL 165 (294)
Q Consensus 160 ~DliV~ 165 (294)
+|+++.
T Consensus 75 ~d~v~~ 80 (391)
T 1kjq_A 75 PHYIVP 80 (391)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 887764
No 155
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=31.27 E-value=43 Score=32.03 Aligned_cols=90 Identities=10% Similarity=0.023 Sum_probs=51.2
Q ss_pred ceeEEEEEeCCchH--HHHHHHHHHcCCCCceEEEEecCCCCC---------ccHHHHHhCCCCEEEcCCCCC---CCCC
Q 022631 80 KKNLAVFVSGGGSN--FRSIHAACLAGSVYGDVVVLVTNKPDC---------GGAEYARDNSIPVILFPKTKD---EPNG 145 (294)
Q Consensus 80 ~~rIaVl~SG~gs~--l~~ll~~~~~~~~~~eI~~Vvt~~~~~---------~~~~~A~~~gIP~~~~~~~~~---~~~~ 145 (294)
..||+|.+|||--. +..++..... ....++.+|..|..-. .+.++|+++|||++.++-... ....
T Consensus 18 ~~~vlVa~SGG~DS~~Ll~ll~~~~~-~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~~~~~~~ 96 (464)
T 3a2k_A 18 GAAVIVGVSGGPDSLALLHVFLSLRD-EWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAG 96 (464)
T ss_dssp SSBEEEECCSSHHHHHHHHHHHHHHH-TTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHTTTT
T ss_pred CCEEEEEEcCcHHHHHHHHHHHHHHH-HcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhhhhhccC
Confidence 46899999996633 3333333222 1245677777664321 246899999999887653210 0001
Q ss_pred CCh---------hHHHHHHHhcCCcEEEEecccc
Q 022631 146 LSP---------NDLVAALSEVNVDFILLAGYLK 170 (294)
Q Consensus 146 ~~d---------~~l~~~L~~~~~DliV~agy~~ 170 (294)
.+. ..+.+..++.+.|.++++....
T Consensus 97 ~~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~d 130 (464)
T 3a2k_A 97 LGAQEAARICRYRFFAELMEKHQAGYVAVGHHGD 130 (464)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChH
Confidence 111 1233445667899888876533
No 156
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=30.88 E-value=51 Score=26.86 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=13.6
Q ss_pred hHHHHHHHhc----CCcEEEEecc
Q 022631 149 NDLVAALSEV----NVDFILLAGY 168 (294)
Q Consensus 149 ~~l~~~L~~~----~~DliV~agy 168 (294)
+++.+.|++. +.|+||+.|=
T Consensus 57 ~~i~~~l~~~~~~~~~DlVittGG 80 (167)
T 1uuy_A 57 ERIKDILQKWSDVDEMDLILTLGG 80 (167)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCC
Confidence 4555666553 7999998863
No 157
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=30.86 E-value=1.4e+02 Score=21.16 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=37.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||+|+ |.|..-..+...+.... ..+|.++ ++... ..+.+.+.++.++..+-. +.+++.+.++ +
T Consensus 5 ~~~v~I~--G~G~iG~~~~~~l~~~g-~~~v~~~--~r~~~-~~~~~~~~~~~~~~~d~~-------~~~~~~~~~~--~ 69 (118)
T 3ic5_A 5 RWNICVV--GAGKIGQMIAALLKTSS-NYSVTVA--DHDLA-ALAVLNRMGVATKQVDAK-------DEAGLAKALG--G 69 (118)
T ss_dssp CEEEEEE--CCSHHHHHHHHHHHHCS-SEEEEEE--ESCHH-HHHHHHTTTCEEEECCTT-------CHHHHHHHTT--T
T ss_pred cCeEEEE--CCCHHHHHHHHHHHhCC-CceEEEE--eCCHH-HHHHHHhCCCcEEEecCC-------CHHHHHHHHc--C
Confidence 4566666 55555555555554432 2455433 33221 223334667777665432 1344445543 7
Q ss_pred CcEEEEec
Q 022631 160 VDFILLAG 167 (294)
Q Consensus 160 ~DliV~ag 167 (294)
+|++|.+.
T Consensus 70 ~d~vi~~~ 77 (118)
T 3ic5_A 70 FDAVISAA 77 (118)
T ss_dssp CSEEEECS
T ss_pred CCEEEECC
Confidence 89888664
No 158
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=30.74 E-value=1.4e+02 Score=28.40 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=47.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCc----cHHHHHhCC-CC-EEEcCCCCCCCCCCChhHHHH
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCG----GAEYARDNS-IP-VILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~----~~~~A~~~g-IP-~~~~~~~~~~~~~~~d~~l~~ 153 (294)
.+|++|+. .+.....+...+. ++..+++.|++...... ..++.++.+ .. .+... .+..++.+
T Consensus 312 gkrv~i~~--~~~~~~~l~~~L~--elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~--------~d~~~l~~ 379 (458)
T 1mio_B 312 GKKVALLG--DPDEIIALSKFII--ELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVE--------GDFFDVHQ 379 (458)
T ss_dssp TCEEEEEE--CHHHHHHHHHHHH--TTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEES--------CBHHHHHH
T ss_pred CCEEEEEc--CchHHHHHHHHHH--HCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEEC--------CCHHHHHH
Confidence 57888773 3444445555443 45678888888664322 223344444 32 22222 12456778
Q ss_pred HHHhcCCcEEEEeccccc
Q 022631 154 ALSEVNVDFILLAGYLKL 171 (294)
Q Consensus 154 ~L~~~~~DliV~agy~~i 171 (294)
.+++.++|++|.-.+.+.
T Consensus 380 ~i~~~~pDl~ig~~~~~~ 397 (458)
T 1mio_B 380 WIKNEGVDLLISNTYGKF 397 (458)
T ss_dssp HHHHSCCSEEEESGGGHH
T ss_pred HHHhcCCCEEEeCcchHH
Confidence 899999999996665443
No 159
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=30.72 E-value=41 Score=31.16 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=15.3
Q ss_pred cCCCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEE
Q 022631 75 DSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVL 113 (294)
Q Consensus 75 ~~~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~V 113 (294)
+...+++||.|+.|| .-..++..+..+. .. ++.++
T Consensus 10 ~~~~~~~~vlviG~G--gr~~a~a~~~a~~-~g-~v~~~ 44 (412)
T 1vkz_A 10 HHHMKAVRVHILGSG--GREHAIGWAFAKQ-GY-EVHFY 44 (412)
T ss_dssp ------CEEEEEECS--HHHHHHHHHHHHT-TC-EEEEE
T ss_pred hhccccCEEEEECCC--HHHHHHHHHHHhC-CC-CEEEE
Confidence 345556777777555 4555555443222 23 56555
No 160
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=30.10 E-value=1.9e+02 Score=26.51 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=37.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||.|+ |+|..-+.++.++++- ..++.++-+++ +.+...+|.+ ++..+. .+.+++.+.+++.+
T Consensus 19 ~~~ili~--g~g~~g~~~~~a~~~~--G~~v~~v~~~~-~~~~~~~ad~----~~~~~~-------~d~~~l~~~~~~~~ 82 (433)
T 2dwc_A 19 AQKILLL--GSGELGKEIAIEAQRL--GVEVVAVDRYA-NAPAMQVAHR----SYVGNM-------MDKDFLWSVVEREK 82 (433)
T ss_dssp CCEEEEE--SCSHHHHHHHHHHHHT--TCEEEEEESST-TCHHHHHSSE----EEESCT-------TCHHHHHHHHHHHC
T ss_pred CCEEEEE--CCCHHHHHHHHHHHHC--CCEEEEEECCC-CChhhhhcce----EEECCC-------CCHHHHHHHHHHcC
Confidence 4677777 5555556666666542 45666655543 3333333322 122221 12356666666677
Q ss_pred CcEEEE
Q 022631 160 VDFILL 165 (294)
Q Consensus 160 ~DliV~ 165 (294)
+|+++.
T Consensus 83 ~d~V~~ 88 (433)
T 2dwc_A 83 PDAIIP 88 (433)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 777664
No 161
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=29.67 E-value=13 Score=30.73 Aligned_cols=14 Identities=7% Similarity=0.024 Sum_probs=10.1
Q ss_pred CCCceeEEEEEeCC
Q 022631 77 GIKKKNLAVFVSGG 90 (294)
Q Consensus 77 ~~~~~rIaVl~SG~ 90 (294)
.-++.|++|+.+|.
T Consensus 10 v~~~~rv~Ii~tGd 23 (169)
T 1y5e_A 10 APKEVRCKIVTISD 23 (169)
T ss_dssp --CCCEEEEEEECS
T ss_pred cccCCEEEEEEEcC
Confidence 34578999999884
No 162
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=29.51 E-value=55 Score=30.42 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=27.9
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC 120 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~ 120 (294)
+.+||++| |||+.+..++...+. ...++.+|||--++.
T Consensus 3 ~~~kIv~l--gGGtGl~~ll~gLk~--~~~~iTaIVtv~DDG 40 (332)
T 2ppv_A 3 KQMNVVLI--GGGTGLSVLARGLRE--FPIDITAIVTVADNG 40 (332)
T ss_dssp CCEEEEEE--ECHHHHHHHHHHHTT--SSEEEEEEECCCCCS
T ss_pred CCCeEEEE--cCcccHHHHHHHHHh--CCCCeEEEEECCcCC
Confidence 35677777 568888888887753 357899999977664
No 163
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=29.27 E-value=1e+02 Score=23.87 Aligned_cols=40 Identities=23% Similarity=0.314 Sum_probs=25.3
Q ss_pred HHHHHHHcCCCCceEEEEecCCCCCc----cHHHHHhCCCCEEEcC
Q 022631 96 SIHAACLAGSVYGDVVVLVTNKPDCG----GAEYARDNSIPVILFP 137 (294)
Q Consensus 96 ~ll~~~~~~~~~~eI~~Vvt~~~~~~----~~~~A~~~gIP~~~~~ 137 (294)
..+.+++.|. ..++.+-.|-+... +..+|+++|||++.++
T Consensus 27 ~v~kai~~gk--akLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~ 70 (121)
T 2lbw_A 27 EVVKALRKGE--KGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIP 70 (121)
T ss_dssp HHHHHHHHSC--CCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECC
T ss_pred HHHHHHHcCC--ceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEEC
Confidence 3445566663 45655544443322 4589999999998876
No 164
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=29.21 E-value=73 Score=28.68 Aligned_cols=66 Identities=12% Similarity=0.050 Sum_probs=27.6
Q ss_pred eeeecCCCCceeEEEEEe------------CCc--hHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEc
Q 022631 71 EKDFDSGIKKKNLAVFVS------------GGG--SNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILF 136 (294)
Q Consensus 71 ~~~~~~~~~~~rIaVl~S------------G~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~ 136 (294)
+.+.....+++||+++.. .+| .....+...+... .++|.++................|+.++.+
T Consensus 11 ~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~ 88 (438)
T 3c48_A 11 SSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVRVAENLRVINI 88 (438)
T ss_dssp --------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT--TCEEEEEEECCCGGGCSEEEEETTEEEEEE
T ss_pred ccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc--CCEEEEEecCCCCCCcccccccCCeEEEEe
Confidence 334445555777777763 123 3345666665543 356655444332110000112357777776
Q ss_pred CC
Q 022631 137 PK 138 (294)
Q Consensus 137 ~~ 138 (294)
+.
T Consensus 89 ~~ 90 (438)
T 3c48_A 89 AA 90 (438)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 165
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=28.81 E-value=79 Score=28.37 Aligned_cols=103 Identities=17% Similarity=0.296 Sum_probs=54.9
Q ss_pred eeeeecCcccccCCCCcceeeecCCCCceeEEEEEeCCchHH--HHHHH---HHH--cCCCCceEEEEecCCCCCcc---
Q 022631 53 RLECVNFAEKVKNNGDKYEKDFDSGIKKKNLAVFVSGGGSNF--RSIHA---ACL--AGSVYGDVVVLVTNKPDCGG--- 122 (294)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIaVl~SG~gs~l--~~ll~---~~~--~~~~~~eI~~Vvt~~~~~~~--- 122 (294)
+.-||+-+.|.. ..-+.|++-.+ .-|-|++-|+|+-+ ..+-+ .+. ....+.+.+.+++.++..++
T Consensus 8 iiKlGNigts~~-idl~LDErAdR----edI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ 82 (283)
T 1qv9_A 8 FIKCGNLGTSMM-MDMLLDERADR----EDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSK 82 (283)
T ss_dssp EEECSCCHHHHH-TTGGGSTTSCC----SSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHH
T ss_pred EEEecccchHHH-HHHHHHhhhcc----CCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCchH
Confidence 455887776642 22235555333 33444444544332 11111 110 00113467888887776553
Q ss_pred -HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEec
Q 022631 123 -AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 123 -~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ag 167 (294)
.+...+.|||++++....- ....+.|++.+.-+||+-.
T Consensus 83 ARE~l~~~~iP~IvI~D~p~-------~K~kd~l~~~g~GYIivk~ 121 (283)
T 1qv9_A 83 AREMLADSEYPAVIIGDAPG-------LKVKDEMEEQGLGYILVKP 121 (283)
T ss_dssp HHHHHHTSSSCEEEEEEGGG-------GGGHHHHHHTTCEEEEETT
T ss_pred HHHHHHhCCCCEEEEcCCcc-------hhhHHHHHhcCCcEEEEec
Confidence 4666778999998864210 1123677887877777643
No 166
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=28.70 E-value=38 Score=28.54 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=42.5
Q ss_pred CceeEEEEEeCCc--h-HHHHHHHHHHcC-CCCceEEEEecC-----CCCCccHHHHHhCCCCEEEcCCCCCCCCCCChh
Q 022631 79 KKKNLAVFVSGGG--S-NFRSIHAACLAG-SVYGDVVVLVTN-----KPDCGGAEYARDNSIPVILFPKTKDEPNGLSPN 149 (294)
Q Consensus 79 ~~~rIaVl~SG~g--s-~l~~ll~~~~~~-~~~~eI~~Vvt~-----~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~ 149 (294)
+++||.+++.|+- | -.++++.....+ ....+|.--=|. +.+....+.++++||++- . .++.+.++
T Consensus 33 ~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis-h-----rar~lt~~ 106 (184)
T 4etn_A 33 GSMDIIFVCTGNTSRSPMAEALFKSIAEREGLNVNVRSAGVFASPNGKATPHAVEALFEKHIALN-H-----VSSPLTEE 106 (184)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC-C-----BCCBCCHH
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHhcCCcEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch-h-----ccCcCCHH
Confidence 4688988888854 2 244555544321 023344222221 123345788999999865 2 23344444
Q ss_pred HHHHHHHhcCCcEEEEecc
Q 022631 150 DLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 150 ~l~~~L~~~~~DliV~agy 168 (294)
++ ..+|+||.+.-
T Consensus 107 d~------~~~DlIltMd~ 119 (184)
T 4etn_A 107 LM------ESADLVLAMTH 119 (184)
T ss_dssp HH------HHCSEEEESSH
T ss_pred Hc------CCCCEEEEcCc
Confidence 32 25899998764
No 167
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=28.51 E-value=52 Score=26.78 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=42.9
Q ss_pred CceeEEEEEeCCc--hH-HHHHHHHHHcC-CC--CceEEEEecCC------CCCccHHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGG--SN-FRSIHAACLAG-SV--YGDVVVLVTNK------PDCGGAEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 79 ~~~rIaVl~SG~g--s~-l~~ll~~~~~~-~~--~~eI~~Vvt~~------~~~~~~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
.++||.++++|+- |- .++++.....+ .+ ..+|.---|.. ++....+.++++||++ . + .++.+
T Consensus 4 ~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~-~--~---~ar~l 77 (157)
T 3n8i_A 4 ATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPM-S--H---VARQI 77 (157)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCC-C--C---CCCBC
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCC-C--C---ceeEC
Confidence 3678888888844 22 44555544321 12 13332222221 2334578899999996 3 2 23344
Q ss_pred ChhHHHHHHHhcCCcEEEEeccc
Q 022631 147 SPNDLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~ 169 (294)
.++++ ..+|+||.+.-.
T Consensus 78 ~~~~~------~~~DlIi~M~~~ 94 (157)
T 3n8i_A 78 TKEDF------ATFDYILCMDES 94 (157)
T ss_dssp CHHHH------HHCSEEEESSHH
T ss_pred CHHHc------CCCCEEEEeCcH
Confidence 44332 258999987654
No 168
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=28.41 E-value=69 Score=25.96 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=41.9
Q ss_pred ceeEEEEEeCCc---hHHHHHHHHHHcC-CC--CceEEEEecC------CCCCccHHHHHhCCCCEEEcCCCCCCCCCCC
Q 022631 80 KKNLAVFVSGGG---SNFRSIHAACLAG-SV--YGDVVVLVTN------KPDCGGAEYARDNSIPVILFPKTKDEPNGLS 147 (294)
Q Consensus 80 ~~rIaVl~SG~g---s~l~~ll~~~~~~-~~--~~eI~~Vvt~------~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~ 147 (294)
++||.++++|+- .-.++++...... .+ ..+|.---|. +.+....+.++++||++- . .++.+.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~-----~ar~l~ 77 (163)
T 1u2p_A 4 PLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-H-----RAAQVG 77 (163)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-C-----CCCBCC
T ss_pred CCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-c-----eeeECC
Confidence 578888888844 2245555554211 12 2334222222 223346788999999874 2 233444
Q ss_pred hhHHHHHHHhcCCcEEEEeccc
Q 022631 148 PNDLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy~ 169 (294)
++++ .. |+||.+.-.
T Consensus 78 ~~~~------~~-DlIi~Md~~ 92 (163)
T 1u2p_A 78 TEHL------AA-DLLVALDRN 92 (163)
T ss_dssp HHHH------TS-SEEEESSHH
T ss_pred hhhc------cC-CEEEEeCHH
Confidence 3322 25 999998654
No 169
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=28.12 E-value=46 Score=27.11 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=23.0
Q ss_pred cHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc----CCcEEEEecc
Q 022631 122 GAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV----NVDFILLAGY 168 (294)
Q Consensus 122 ~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~----~~DliV~agy 168 (294)
+.++.++.|+.+.......+ +.+++.+.|++. +.|+||+.|=
T Consensus 26 l~~~l~~~G~~v~~~~iv~D-----d~~~i~~~l~~~~~~~~~DlVittGG 71 (164)
T 2is8_A 26 IREVLAGGPFEVAAYELVPD-----EPPMIKKVLRLWADREGLDLILTNGG 71 (164)
T ss_dssp HHHHHTTSSEEEEEEEEECS-----CHHHHHHHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHHCCCeEeEEEEcCC-----CHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 45667777876544322111 124455555442 6899888763
No 170
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=27.84 E-value=42 Score=28.27 Aligned_cols=11 Identities=9% Similarity=0.226 Sum_probs=9.5
Q ss_pred CceeEEEEEeC
Q 022631 79 KKKNLAVFVSG 89 (294)
Q Consensus 79 ~~~rIaVl~SG 89 (294)
++.|++|+.+|
T Consensus 13 ~~~rv~IistG 23 (189)
T 1jlj_A 13 HQIRVGVLTVS 23 (189)
T ss_dssp CCCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 47899999988
No 171
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=27.63 E-value=1.6e+02 Score=27.38 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=41.9
Q ss_pred CchHHHHHHHHHHcCCCCceEEEEecCCCCCcc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEE
Q 022631 90 GGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILL 165 (294)
Q Consensus 90 ~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ 165 (294)
.|+.+..|..+...|+ .++|.+.= .+|...+ .....+.|||+..+. |..+-..+++..+|.+|+
T Consensus 164 ~gtal~~l~~A~~~gk-~~~V~v~E-tRP~~qG~rlta~eL~~~GI~vtlI~----------Dsa~~~~M~~~~Vd~Viv 231 (351)
T 1t5o_A 164 WGTALGVVRSAVEQGK-EIRVIACE-TRPLNQGSRLTCWELMEDGIDVTLIT----------DSMVGIVMQKGMVDKVIV 231 (351)
T ss_dssp SCSHHHHHHHHHHTTC-CCEEEEEC-CTTTTHHHHTHHHHHHHTTCCEEEEC----------GGGHHHHHHTTCCSEEEE
T ss_pred CChHHHHHHHHHHCCC-EEEEEEeC-CCcccccHHHHHHHHHhCCCCEEEEe----------hhHHHHHhhcCCCCEEEE
Confidence 4677776666666654 44544332 2344322 233456799998875 345556677777998886
Q ss_pred ecccccc
Q 022631 166 AGYLKLI 172 (294)
Q Consensus 166 agy~~il 172 (294)
|--++.
T Consensus 232 -GAd~V~ 237 (351)
T 1t5o_A 232 -GADRIV 237 (351)
T ss_dssp -CCSEEE
T ss_pred -Cccchh
Confidence 444554
No 172
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=27.55 E-value=77 Score=28.23 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=20.9
Q ss_pred hcCCcEEEEeccccccChhHHhc-CCC-CEEEEcCCC
Q 022631 157 EVNVDFILLAGYLKLIPMELIRA-YPR-SIVNIHPSL 191 (294)
Q Consensus 157 ~~~~DliV~agy~~ilp~~~l~~-~~~-g~iNiHPSl 191 (294)
..++|+|.+-++...+-..++.. ... -++.+|...
T Consensus 120 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 120 EPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp SCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred CCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 44999999887654433334432 122 377788664
No 173
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=27.33 E-value=1.2e+02 Score=29.63 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=51.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCc----cHHHHHh--CCCCEEEcCCCCCCCCCCChhHHHH
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCG----GAEYARD--NSIPVILFPKTKDEPNGLSPNDLVA 153 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~----~~~~A~~--~gIP~~~~~~~~~~~~~~~d~~l~~ 153 (294)
.+|++|+ |.+.....+...+. ++-.+++.+++...... ..+...+ .|.....+.. .+..++.+
T Consensus 364 GKrvaI~--gd~~~~~~la~fL~--elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~-------~D~~~l~~ 432 (523)
T 3u7q_B 364 GKRFALW--GDPDFVMGLVKFLL--ELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIG-------KDLWHLRS 432 (523)
T ss_dssp TCEEEEE--CSHHHHHHHHHHHH--HTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEES-------CCHHHHHH
T ss_pred CCEEEEE--CCchHHHHHHHHHH--HcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEEC-------CCHHHHHH
Confidence 5788887 44444555555444 34568888888643321 2233332 2222222221 12467888
Q ss_pred HHHhcCCcEEEEeccccccChhH
Q 022631 154 ALSEVNVDFILLAGYLKLIPMEL 176 (294)
Q Consensus 154 ~L~~~~~DliV~agy~~ilp~~~ 176 (294)
.+++.+|||+|.-++.+.+-.+.
T Consensus 433 ~i~~~~pDLlig~s~~k~~a~~~ 455 (523)
T 3u7q_B 433 LVFTDKPDFMIGNSYGKFIQRDT 455 (523)
T ss_dssp HHHHTCCSEEEECTTHHHHHHHH
T ss_pred HHHhcCCCEEEECccHHHHHHHh
Confidence 89999999999999888776655
No 174
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=27.19 E-value=87 Score=29.06 Aligned_cols=78 Identities=13% Similarity=0.033 Sum_probs=39.5
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCC-CCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKP-DCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~-~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++||.|+ |+|.....++.++++- ..++++|.++.. .++...+|.+ .+.++.......-.+.+++++.+++.
T Consensus 2 ~k~ilI~--g~g~~~~~~~~a~~~~--G~~vv~v~~~~~~~~~~~~~ad~----~~~~~p~~~~~~~~d~~~l~~~~~~~ 73 (449)
T 2w70_A 2 LDKIVIA--NRGEIALRILRACKEL--GIKTVAVHSSADRDLKHVLLADE----TVCIGPAPSVKSYLNIPAIISAAEIT 73 (449)
T ss_dssp CSEEEEC--CCHHHHHHHHHHHHHH--TCEEEEEEEGGGTTCHHHHHSSE----EEEEECSSGGGTTTCHHHHHHHHHHH
T ss_pred CceEEEe--CCcHHHHHHHHHHHHc--CCeEEEEeccccccCchhhhCCE----EEEcCCCCccccccCHHHHHHHHHHc
Confidence 4666655 5566555666666542 356777766432 2333344432 22221100000001236777778888
Q ss_pred CCcEEEE
Q 022631 159 NVDFILL 165 (294)
Q Consensus 159 ~~DliV~ 165 (294)
++|+++.
T Consensus 74 ~~d~v~~ 80 (449)
T 2w70_A 74 GAVAIHP 80 (449)
T ss_dssp TCCEEEC
T ss_pred CCCEEEE
Confidence 8888764
No 175
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=26.92 E-value=1.9e+02 Score=24.03 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=38.4
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
++||+|+..| .--..+...+... ..+|.+ +.++......+++++.|+....- ..+ .+ .+
T Consensus 23 mmkI~IIG~G--~mG~~la~~l~~~--g~~V~~-v~~r~~~~~~~l~~~~g~~~~~~-----------~~~---~~--~~ 81 (220)
T 4huj_A 23 MTTYAIIGAG--AIGSALAERFTAA--QIPAII-ANSRGPASLSSVTDRFGASVKAV-----------ELK---DA--LQ 81 (220)
T ss_dssp SCCEEEEECH--HHHHHHHHHHHHT--TCCEEE-ECTTCGGGGHHHHHHHTTTEEEC-----------CHH---HH--TT
T ss_pred CCEEEEECCC--HHHHHHHHHHHhC--CCEEEE-EECCCHHHHHHHHHHhCCCcccC-----------hHH---HH--hc
Confidence 5789999544 3333444444332 235544 34554444566777778765421 112 22 36
Q ss_pred CcEEEEeccccc
Q 022631 160 VDFILLAGYLKL 171 (294)
Q Consensus 160 ~DliV~agy~~i 171 (294)
.|++|++--...
T Consensus 82 aDvVilavp~~~ 93 (220)
T 4huj_A 82 ADVVILAVPYDS 93 (220)
T ss_dssp SSEEEEESCGGG
T ss_pred CCEEEEeCChHH
Confidence 899998864433
No 176
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=26.88 E-value=89 Score=28.06 Aligned_cols=34 Identities=6% Similarity=0.029 Sum_probs=17.5
Q ss_pred ceeEEEEEeCCchHHHH-HHHHHHcCCCCceEEEEecC
Q 022631 80 KKNLAVFVSGGGSNFRS-IHAACLAGSVYGDVVVLVTN 116 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~-ll~~~~~~~~~~eI~~Vvt~ 116 (294)
+.||+|+.. |.--+. .+..+.. ....++++|...
T Consensus 7 ~~rvgiiG~--G~~g~~~~~~~~~~-~~~~~l~av~d~ 41 (352)
T 3kux_A 7 KIKVGLLGY--GYASKTFHAPLIMG-TPGLELAGVSSS 41 (352)
T ss_dssp CEEEEEECC--SHHHHHTHHHHHHT-STTEEEEEEECS
T ss_pred CceEEEECC--CHHHHHHHHHHHhh-CCCcEEEEEECC
Confidence 567887744 433332 2333322 224688877654
No 177
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold, gluconeogenesis, glycolysis, structural genomics; HET: G6Q; 1.65A {Staphylococcus aureus subsp} SCOP: c.80.1.2 PDB: 3ifs_A*
Probab=26.85 E-value=39 Score=32.68 Aligned_cols=58 Identities=16% Similarity=0.165 Sum_probs=37.8
Q ss_pred ceeEEEEEeCCchHHHHHHHH------HHc--CC--CCceEEEEecCCCCCccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAA------CLA--GS--VYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~------~~~--~~--~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~ 138 (294)
+.-+.|++|.+|+..+.+..+ +.. |. ....+++| |++.+..+.+.|++.||+++.++.
T Consensus 133 ~~Tl~iViSKSgtT~ET~~n~~~~r~~l~~~~g~~~~~~h~vav-T~~~~g~L~~~a~~~G~~~F~~~d 200 (446)
T 3ff1_A 133 KDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFAT-TDKEKGALKQLATNEGYETFIVPD 200 (446)
T ss_dssp CCEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE-ECSSCSHHHHHHHHHTCEEEECCT
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCcccccceEEEE-eCCCcchhhhHHHHcCCeEEEecc
Confidence 456778889988765544332 211 21 11246654 877666778899999999888764
No 178
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=26.73 E-value=1.5e+02 Score=27.71 Aligned_cols=78 Identities=15% Similarity=0.139 Sum_probs=36.7
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHH---hCCCCE-EEcCCCCCCCCCCChhHHHHH
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYAR---DNSIPV-ILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~---~~gIP~-~~~~~~~~~~~~~~d~~l~~~ 154 (294)
++.||+|+ |.|.--...+..+.. ....++++|....++ ...++|+ ++|+|- ..+.. .+.++.+.
T Consensus 19 ~~~rvgiI--G~G~~g~~h~~~l~~-~~~~~lvav~d~~~~-~~~~~a~~~~~~g~~~~~~~~~--------~~~~~~~l 86 (444)
T 2ixa_A 19 KKVRIAFI--AVGLRGQTHVENMAR-RDDVEIVAFADPDPY-MVGRAQEILKKNGKKPAKVFGN--------GNDDYKNM 86 (444)
T ss_dssp CCEEEEEE--CCSHHHHHHHHHHHT-CTTEEEEEEECSCHH-HHHHHHHHHHHTTCCCCEEECS--------STTTHHHH
T ss_pred CCceEEEE--ecCHHHHHHHHHHHh-CCCcEEEEEEeCCHH-HHHHHHHHHHhcCCCCCceecc--------CCCCHHHH
Confidence 46788888 444332333333332 124678777643322 2333443 567642 22210 01123344
Q ss_pred HHhcCCcEEEEecc
Q 022631 155 LSEVNVDFILLAGY 168 (294)
Q Consensus 155 L~~~~~DliV~agy 168 (294)
|+..++|+|+++.-
T Consensus 87 l~~~~vD~V~i~tp 100 (444)
T 2ixa_A 87 LKDKNIDAVFVSSP 100 (444)
T ss_dssp TTCTTCCEEEECCC
T ss_pred hcCCCCCEEEEcCC
Confidence 55556777776643
No 179
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=26.63 E-value=1.4e+02 Score=27.10 Aligned_cols=94 Identities=11% Similarity=0.101 Sum_probs=49.7
Q ss_pred ceeEEEEEeCC-chHHHHHHHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 80 KKNLAVFVSGG-GSNFRSIHAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 80 ~~rIaVl~SG~-gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
.+||+++.-+. +-....++.++.. +..+ .+++.|++ ..+.+.|++.|..+....+ +.+.
T Consensus 155 gl~va~vGD~~~~rva~Sl~~~~~~--~G~~--v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d------------~~ea 218 (308)
T 1ml4_A 155 GLKIGLLGDLKYGRTVHSLAEALTF--YDVE--LYLISPELLRMPRHIVEELREKGMKVVETTT------------LEDV 218 (308)
T ss_dssp SEEEEEESCTTTCHHHHHHHHHGGG--SCEE--EEEECCGGGCCCHHHHHHHHHTTCCEEEESC------------THHH
T ss_pred CeEEEEeCCCCcCchHHHHHHHHHH--CCCE--EEEECCccccCCHHHHHHHHHcCCeEEEEcC------------HHHH
Confidence 46666663332 2334555554321 2223 33333432 1245667777776544321 1122
Q ss_pred HHhcCCcEEEEecc----------------ccccChhHHhcCCCCEEEEcCCC
Q 022631 155 LSEVNVDFILLAGY----------------LKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 155 L~~~~~DliV~agy----------------~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
+ .+.|++..-.| .+-|.+++++..+-.++-+||..
T Consensus 219 v--~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 219 I--GKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp H--TTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred h--cCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 3 26777777554 23467777777777889999755
No 180
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=26.53 E-value=71 Score=30.79 Aligned_cols=83 Identities=18% Similarity=0.149 Sum_probs=45.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCcc-HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG-AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~-~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
.+|++|+ |++.....+...+. ++-.+++.+.|......- ....+..+.....++. .+..++.+.+++.
T Consensus 332 GKrv~i~--~~~~~~~~l~~~L~--ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~~d-------~d~~el~~~i~~~ 400 (483)
T 3pdi_A 332 GKRVLLY--TGGVKSWSVVSALQ--DLGMKVVATGTKKSTEEDKARIRELMGDDVKMLDE-------GNARVLLKTVDEY 400 (483)
T ss_dssp TCEEEEE--CSSSCHHHHHHHHH--HHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBCCS-------CSHHHHHHHHHHT
T ss_pred CCEEEEE--CCCchHHHHHHHHH--HCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEEeC-------CCHHHHHHHHHhc
Confidence 5787776 33443333333332 134578777665432211 1222233433233322 2346788889999
Q ss_pred CCcEEEEeccccccC
Q 022631 159 NVDFILLAGYLKLIP 173 (294)
Q Consensus 159 ~~DliV~agy~~ilp 173 (294)
+|||+|.-++.+.+.
T Consensus 401 ~pDL~ig~~~~~~~a 415 (483)
T 3pdi_A 401 QADILIAGGRNMYTA 415 (483)
T ss_dssp TCSEEECCGGGHHHH
T ss_pred CCCEEEECCchhHHH
Confidence 999999887776553
No 181
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=26.49 E-value=57 Score=23.55 Aligned_cols=40 Identities=20% Similarity=0.161 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCCceEEEEecCCCC---CccHHHHHhCCCCEEEcC
Q 022631 96 SIHAACLAGSVYGDVVVLVTNKPD---CGGAEYARDNSIPVILFP 137 (294)
Q Consensus 96 ~ll~~~~~~~~~~eI~~Vvt~~~~---~~~~~~A~~~gIP~~~~~ 137 (294)
..+.+++.| ..+++.+-.|-++ ..+..+|+++|||++.++
T Consensus 18 ~v~kai~~g--kaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 18 QTVKALKRG--SVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHTTT--CEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHcC--CeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 445556665 3455444443322 124688999999999886
No 182
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=26.19 E-value=37 Score=27.76 Aligned_cols=67 Identities=21% Similarity=0.165 Sum_probs=33.2
Q ss_pred CceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHH----HHhCCCCEEEcCCCCCCCCCCChhHHHHH
Q 022631 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEY----ARDNSIPVILFPKTKDEPNGLSPNDLVAA 154 (294)
Q Consensus 79 ~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~----A~~~gIP~~~~~~~~~~~~~~~d~~l~~~ 154 (294)
+..|++|+..|. .+..|+.. |.....+.++ .++.|+.+.....-.+ +.+++.+.
T Consensus 4 m~~~v~Ii~~Gd---------El~~G~i~--------D~n~~~l~~~~~~~l~~~G~~v~~~~iv~D-----d~~~I~~~ 61 (167)
T 2g2c_A 4 MHIKSAIIVVSD---------RISTGTRE--------NKALPLLQRLMSDELQDYSYELISEVVVPE-----GYDTVVEA 61 (167)
T ss_dssp CEEEEEEEEECH---------HHHHTSSC--------CCHHHHHHHHHCC----CEEEEEEEEEECS-----SHHHHHHH
T ss_pred CccEEEEEEECC---------cccCCcee--------ccHHHHHHHhHHhHHHHCCCEEeEEEEeCC-----CHHHHHHH
Confidence 468999999883 23344320 1101123455 6677776544322111 12455555
Q ss_pred HHhc---CCcEEEEec
Q 022631 155 LSEV---NVDFILLAG 167 (294)
Q Consensus 155 L~~~---~~DliV~ag 167 (294)
|++. +.|+||+.|
T Consensus 62 l~~a~~~~~DlVittG 77 (167)
T 2g2c_A 62 IATALKQGARFIITAG 77 (167)
T ss_dssp HHHHHHTTCSEEEEES
T ss_pred HHHHHhCCCCEEEECC
Confidence 5543 489988876
No 183
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=26.17 E-value=1.1e+02 Score=26.64 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=34.7
Q ss_pred ceeEEEEEeCCc-hHH-HHHHHHHHcCCCCceEEEEecCCCCC------ccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGG-SNF-RSIHAACLAGSVYGDVVVLVTNKPDC------GGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~g-s~l-~~ll~~~~~~~~~~eI~~Vvt~~~~~------~~~~~A~~~gIP~~~~~~ 138 (294)
..+++|.+|||- |.+ ..++... .| .++.+|..+.... .+.++|+..||+++.++-
T Consensus 26 ~~~vvv~lSGGiDSsv~a~l~~~~-~g---~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i 88 (249)
T 3p52_A 26 SQGVVLGLSGGIDSALVATLCKRA-LK---ENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEI 88 (249)
T ss_dssp CSEEEEECCSSHHHHHHHHHHHHH-HT---TSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHH-cC---CcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEEC
Confidence 578999999964 332 2232221 23 4677777665321 246889999999988753
No 184
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=25.93 E-value=1.4e+02 Score=25.63 Aligned_cols=79 Identities=10% Similarity=0.032 Sum_probs=43.7
Q ss_pred CCceeEEEEEeCCc--hH-HHHHHHHHHcCCCCceEEEEecC---CCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHH
Q 022631 78 IKKKNLAVFVSGGG--SN-FRSIHAACLAGSVYGDVVVLVTN---KPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDL 151 (294)
Q Consensus 78 ~~~~rIaVl~SG~g--s~-l~~ll~~~~~~~~~~eI~~Vvt~---~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l 151 (294)
..++||.+++.|+- |- .+.++.....+. .++.---+. +.+....+.++++||++-. ..++.+.+..+
T Consensus 79 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~--~~v~SAGt~~g~~~dp~a~~vl~e~Gidis~-----~~sr~l~~~~~ 151 (213)
T 3t38_A 79 SPVPQVLFICVHNAGRSQIASALLSHYAGSS--VEVRSAGSLPASEIHPLVLEILSERGVNISD-----AFPKPLTDDVI 151 (213)
T ss_dssp SCCCEEEEEESSSSSHHHHHHHHHHHHHGGG--CEEEEEESSCCSSCCHHHHHHHHHTTCCCTT-----CCCCBCCHHHH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHhccCc--eEEEecccCCCCCCCHHHHHHHHHcCCCccc-----CcCCcCCHHHh
Confidence 34788888888853 32 345555544332 333222222 2233467889999998531 12344444332
Q ss_pred HHHHHhcCCcEEEEeccc
Q 022631 152 VAALSEVNVDFILLAGYL 169 (294)
Q Consensus 152 ~~~L~~~~~DliV~agy~ 169 (294)
..+|+||.++..
T Consensus 152 ------~~~DlIitMd~~ 163 (213)
T 3t38_A 152 ------RASDYVITMGCG 163 (213)
T ss_dssp ------HHCSEEEESSCC
T ss_pred ------ccCCEEEEecCc
Confidence 258999998654
No 185
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=25.65 E-value=1.1e+02 Score=27.73 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=38.0
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCC-CCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKP-DCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~-~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
++||.|+ |+|..-..++.++++- ..+++++ +.+. +++..++|.+ ++.++. .+.+++++.+++.
T Consensus 7 ~~~ilI~--g~g~~~~~~~~a~~~~--G~~~v~v-~~~~~~~~~~~~ad~----~~~~~~-------~d~~~l~~~~~~~ 70 (403)
T 4dim_A 7 NKRLLIL--GAGRGQLGLYKAAKEL--GIHTIAG-TMPNAHKPCLNLADE----ISYMDI-------SNPDEVEQKVKDL 70 (403)
T ss_dssp CCEEEEE--CCCGGGHHHHHHHHHH--TCEEEEE-ECSSCCHHHHHHCSE----EEECCT-------TCHHHHHHHTTTS
T ss_pred CCEEEEE--CCcHhHHHHHHHHHHC--CCEEEEE-cCCCCCCcchhhCCe----EEEecC-------CCHHHHHHHHHHc
Confidence 4677666 4444444455555432 3456555 4332 4344444432 222221 1246777888888
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
++|.|+..+
T Consensus 71 ~~d~v~~~~ 79 (403)
T 4dim_A 71 NLDGAATCC 79 (403)
T ss_dssp CCSEEECCS
T ss_pred CCCEEEeCC
Confidence 888887643
No 186
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=25.63 E-value=88 Score=27.29 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=34.2
Q ss_pred ceeEEEEEeCCc-hH-HHHHHHHHHcCCCCceEEEEecCCCCC------ccHHHHHhCCCCEEEcC
Q 022631 80 KKNLAVFVSGGG-SN-FRSIHAACLAGSVYGDVVVLVTNKPDC------GGAEYARDNSIPVILFP 137 (294)
Q Consensus 80 ~~rIaVl~SG~g-s~-l~~ll~~~~~~~~~~eI~~Vvt~~~~~------~~~~~A~~~gIP~~~~~ 137 (294)
..+++|.+|||- |. +..++.... ..++.+|..+.... .+.++|+..||++..++
T Consensus 25 ~~~vvv~lSGGiDSsv~~~l~~~~~----~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~ 86 (268)
T 1xng_A 25 FKKVVYGLSGGLDSAVVGVLCQKVF----KENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYS 86 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHH----GGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEccCcHHHHHHHHHHHHhC----CCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 468999999965 32 233332221 24677777664321 25688999999998876
No 187
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=25.58 E-value=94 Score=25.89 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=30.9
Q ss_pred eeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC------CccHHHHHhCCCCEEEcC
Q 022631 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD------CGGAEYARDNSIPVILFP 137 (294)
Q Consensus 81 ~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~------~~~~~~A~~~gIP~~~~~ 137 (294)
.||+|-+|||--..-.+.-....+ .++.+|..+..- ..+.++|+++|||++.+.
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~---~~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~ 104 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIR---PDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYR 104 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHS---TTCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHhC---CCCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEe
Confidence 479999998653332222222222 234555444321 135688999999998775
No 188
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=25.48 E-value=71 Score=26.43 Aligned_cols=80 Identities=16% Similarity=0.105 Sum_probs=43.8
Q ss_pred CCceeEEEEEeCCc---hHHHHHHHHHHc-CCC--CceEE-EEecC-----CCCCccHHHHHhCCCCEEEcCCCCCCCCC
Q 022631 78 IKKKNLAVFVSGGG---SNFRSIHAACLA-GSV--YGDVV-VLVTN-----KPDCGGAEYARDNSIPVILFPKTKDEPNG 145 (294)
Q Consensus 78 ~~~~rIaVl~SG~g---s~l~~ll~~~~~-~~~--~~eI~-~Vvt~-----~~~~~~~~~A~~~gIP~~~~~~~~~~~~~ 145 (294)
..++||.+++.|+- .-.+.++..... ..+ .++|. +-+.. +++....+.++++||++-.. .++.
T Consensus 16 ~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h-----~ar~ 90 (173)
T 4etm_A 16 GSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGM-----LARQ 90 (173)
T ss_dssp SSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTC-----CCCB
T ss_pred CCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCC-----cccc
Confidence 34789999999854 334555554322 112 23332 22221 22334678899999986321 2344
Q ss_pred CChhHHHHHHHhcCCcEEEEecc
Q 022631 146 LSPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 146 ~~d~~l~~~L~~~~~DliV~agy 168 (294)
+..+++ + .+|+||.+.-
T Consensus 91 l~~~d~----~--~~DlIl~Md~ 107 (173)
T 4etm_A 91 VSEQDL----D--DFDYIIAMDA 107 (173)
T ss_dssp CCHHHH----H--HCSEEEESSH
T ss_pred CCHhhc----C--CCCEEEEeCc
Confidence 444433 2 4799998764
No 189
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=25.40 E-value=84 Score=28.98 Aligned_cols=64 Identities=25% Similarity=0.341 Sum_probs=39.1
Q ss_pred eEEEEecCCC--CC--cc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEecccccc
Q 022631 109 DVVVLVTNKP--DC--GG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLI 172 (294)
Q Consensus 109 eI~~Vvt~~~--~~--~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~agy~~il 172 (294)
+-++|||++. +. +. .+..++.|+.+..++...-++....-+++.+.+++.++|+||..|=+..+
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~ 105 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPH 105 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchh
Confidence 3467888753 22 22 24456789988777643322221223466777888999999988866655
No 190
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=25.36 E-value=77 Score=26.93 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=23.1
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIP 132 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP 132 (294)
++||+|+ |.|.--..+...+... ..+| .+.++......+++++.|+.
T Consensus 3 ~m~i~ii--G~G~mG~~~a~~l~~~--g~~v--~~~~~~~~~~~~~~~~~g~~ 49 (259)
T 2ahr_A 3 AMKIGII--GVGKMASAIIKGLKQT--PHEL--IISGSSLERSKEIAEQLALP 49 (259)
T ss_dssp CCEEEEE--CCSHHHHHHHHHHTTS--SCEE--EEECSSHHHHHHHHHHHTCC
T ss_pred ccEEEEE--CCCHHHHHHHHHHHhC--CCeE--EEECCCHHHHHHHHHHcCCE
Confidence 4688888 4444444444444332 2333 34444332334455555765
No 191
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=25.10 E-value=23 Score=32.20 Aligned_cols=82 Identities=17% Similarity=0.124 Sum_probs=47.7
Q ss_pred CCceeEEEEEeCCchHHHHHHH-HHHcCCCCceEEEEecCCCCCccH-HHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 78 IKKKNLAVFVSGGGSNFRSIHA-ACLAGSVYGDVVVLVTNKPDCGGA-EYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~ll~-~~~~~~~~~eI~~Vvt~~~~~~~~-~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
++-.||+|...|+++.-...++ +...| +-++||-..+-... ..|+++||.++...+-. ++..--+.+.+.|
T Consensus 193 ~~vgkIaV~~GgGtsG~~~~i~~a~~~G-----vDt~ITGe~~~~~~~~~A~E~ginVI~AGHyA--TEt~Gv~aL~~~L 265 (278)
T 3rxy_A 193 QPLGKIAVVHGAGTNGGYAVARAYFDHG-----VRTVLYIHIAPEEAERLRREGGGNLIVTGHIA--SDLVGINRYVQAL 265 (278)
T ss_dssp SBCCSEEECCSSSSCCHHHHHHHHHHTT-----CCEEEESCCCHHHHHHHHHHCSSEEEECCHHH--HHHHHHHHHHHHH
T ss_pred CcCCEEEEEcCCCCCCcHHHHHHHHHcC-----CCEEEEecCchHHHHHHHHHcCCeEEEeccch--HhHHHHHHHHHHH
Confidence 3456788774433333233333 34444 45677765554445 78999999999876521 1111124677888
Q ss_pred HhcCCcEEEEe
Q 022631 156 SEVNVDFILLA 166 (294)
Q Consensus 156 ~~~~~DliV~a 166 (294)
++++.+.+=+.
T Consensus 266 e~~Glevi~~s 276 (278)
T 3rxy_A 266 EERGVEVVRMS 276 (278)
T ss_dssp HHTTCEEEECT
T ss_pred HHcCCeeeccC
Confidence 88888865433
No 192
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=24.90 E-value=53 Score=25.38 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=36.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVN 159 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~ 159 (294)
.+||+|+ |.|.--+.+...+.. ...+ + ++.++......+++++.|+.+...+ ++.+.++ +
T Consensus 21 ~~~v~ii--G~G~iG~~~a~~l~~--~g~~-v-~v~~r~~~~~~~~a~~~~~~~~~~~------------~~~~~~~--~ 80 (144)
T 3oj0_A 21 GNKILLV--GNGMLASEIAPYFSY--PQYK-V-TVAGRNIDHVRAFAEKYEYEYVLIN------------DIDSLIK--N 80 (144)
T ss_dssp CCEEEEE--CCSHHHHHHGGGCCT--TTCE-E-EEEESCHHHHHHHHHHHTCEEEECS------------CHHHHHH--T
T ss_pred CCEEEEE--CCCHHHHHHHHHHHh--CCCE-E-EEEcCCHHHHHHHHHHhCCceEeec------------CHHHHhc--C
Confidence 4688887 445444444444332 2345 3 3344433334567888887654322 1223333 6
Q ss_pred CcEEEEec
Q 022631 160 VDFILLAG 167 (294)
Q Consensus 160 ~DliV~ag 167 (294)
.|++|.+.
T Consensus 81 ~Divi~at 88 (144)
T 3oj0_A 81 NDVIITAT 88 (144)
T ss_dssp CSEEEECS
T ss_pred CCEEEEeC
Confidence 88888764
No 193
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=24.48 E-value=59 Score=28.73 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=18.1
Q ss_pred CCceeEEEEEeCCchHHHHHHHHHHcC--CCCceEEEEecC
Q 022631 78 IKKKNLAVFVSGGGSNFRSIHAACLAG--SVYGDVVVLVTN 116 (294)
Q Consensus 78 ~~~~rIaVl~SG~gs~l~~ll~~~~~~--~~~~eI~~Vvt~ 116 (294)
.++.||+|+..| .--...+..+... ....++++|...
T Consensus 5 ~~~~rvgiIG~G--~iG~~~~~~l~~~~~~~~~~lvav~d~ 43 (294)
T 1lc0_A 5 SGKFGVVVVGVG--RAGSVRLRDLKDPRSAAFLNLIGFVSR 43 (294)
T ss_dssp CCSEEEEEECCS--HHHHHHHHHHTSHHHHTTEEEEEEECS
T ss_pred CCcceEEEEEEc--HHHHHHHHHHhccccCCCEEEEEEECc
Confidence 446788888544 2222223332210 114577777653
No 194
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=24.45 E-value=80 Score=28.59 Aligned_cols=36 Identities=14% Similarity=0.215 Sum_probs=22.2
Q ss_pred CceeEEEEEeCCch-------HHHHHHHHHHcCCCCceEEEEecC
Q 022631 79 KKKNLAVFVSGGGS-------NFRSIHAACLAGSVYGDVVVLVTN 116 (294)
Q Consensus 79 ~~~rIaVl~SG~gs-------~l~~ll~~~~~~~~~~eI~~Vvt~ 116 (294)
+++||+||+.|..+ ..+++++++.. ..++++.|-.+
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~--~gy~v~~i~i~ 44 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINT--NKFDIIPIGIT 44 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT--TTEEEEEEEEC
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhH--hCCEEEEEEEe
Confidence 47899999877542 13445565533 35678777544
No 195
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=24.39 E-value=1.6e+02 Score=27.67 Aligned_cols=70 Identities=14% Similarity=0.201 Sum_probs=41.7
Q ss_pred CchHHHHHHHHHHcCCCCceEEEEecCCCCCcc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEE
Q 022631 90 GGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILL 165 (294)
Q Consensus 90 ~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ 165 (294)
.|+.+..|..+...|+ .++|.+.= .+|...+ .....+.|||+..+. |..+-..+++..+|.+|+
T Consensus 195 ~gTal~~l~~A~~~gk-~~~V~v~E-tRP~~qGarltA~eL~~~GIpvtlI~----------Dsa~~~~M~~~~Vd~ViV 262 (383)
T 2a0u_A 195 YGTALGVVRQLFYDGK-LERVYACE-TRPWNQGARLTVYECVQEDIPCTLIC----------DGAASSLMLNRKIDAVVV 262 (383)
T ss_dssp SCSHHHHHHHHHHTTC-EEEEEEEC-CTTTTHHHHTHHHHHHHTTCCEEEEC----------GGGHHHHHHHSCCCEEEE
T ss_pred CchHHHHHHHHHHcCC-eEEEEEeC-CCCccchHHHHHHHHHHcCCCEEEEe----------hhHHHHHhhcCCCCEEEE
Confidence 3677877777766653 33433222 2343322 233456799998875 345556677778999886
Q ss_pred ecccccc
Q 022631 166 AGYLKLI 172 (294)
Q Consensus 166 agy~~il 172 (294)
|--++.
T Consensus 263 -GAD~V~ 268 (383)
T 2a0u_A 263 -GADRIC 268 (383)
T ss_dssp -CCSEEC
T ss_pred -CccEEe
Confidence 444554
No 196
>1zzg_A Glucose-6-phosphate isomerase; structural genomics, riken structural genomics/PR initiative, RSGI, NPPSFA; 1.95A {Thermus thermophilus}
Probab=24.35 E-value=41 Score=32.13 Aligned_cols=58 Identities=21% Similarity=0.249 Sum_probs=37.7
Q ss_pred ceeEEEEEeCCchHHHHHHH------HHH--cCC-CCceEEEEecCCCCCccHHHHHhCCCCEEEcCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHA------ACL--AGS-VYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~------~~~--~~~-~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~ 138 (294)
..-+.|++|.+|++.+.+.. .+. .|. ....++ +||++.+.++.+.|++.||+++.++.
T Consensus 116 ~~TlviviSKSGtT~ET~~~~~~ar~~l~~~~G~~~~~~~v-avT~~~~s~L~~~a~~~Gi~~f~~~d 182 (415)
T 1zzg_A 116 RKTLVNAVSKSGSTAETLAGLAVFLKWLKAHLGEDWRRHLV-VTTDPKEGPLRAFAEREGLKAFAIPK 182 (415)
T ss_dssp GGEEEEEEESSSCCHHHHHHHHHHHHHHHHHHGGGGGGGEE-EEECSSSSHHHHHHHHHTCEEEECCT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHHHHHHHhcCccccCeEE-EEeCCCCChHHHHHHHhCCcEEEecc
Confidence 44589999999977554433 211 121 113444 55666677788999999999888864
No 197
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=24.34 E-value=2.4e+02 Score=25.59 Aligned_cols=22 Identities=9% Similarity=0.110 Sum_probs=17.0
Q ss_pred cccChhHHhcCCCCEEEEcCCC
Q 022631 170 KLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 170 ~ilp~~~l~~~~~g~iNiHPSl 191 (294)
+.|..++++..+-.++-+||..
T Consensus 247 y~v~~~ll~~a~~~ai~mH~lP 268 (310)
T 3csu_A 247 FVLRASDLHNAKANMKVLHPLP 268 (310)
T ss_dssp CCBCGGGGTTCCTTCEEECCSC
T ss_pred cCCCHHHHhhcCCCCEEECCCC
Confidence 3577888887777889999755
No 198
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=23.94 E-value=78 Score=25.63 Aligned_cols=78 Identities=12% Similarity=0.153 Sum_probs=42.7
Q ss_pred CceeEEEEEeCCc---hHHHHHHHHHHc-CCCC---ceEEE-EecC-----CCCCccHHHHHhCCCCEEEcCCCCCCCCC
Q 022631 79 KKKNLAVFVSGGG---SNFRSIHAACLA-GSVY---GDVVV-LVTN-----KPDCGGAEYARDNSIPVILFPKTKDEPNG 145 (294)
Q Consensus 79 ~~~rIaVl~SG~g---s~l~~ll~~~~~-~~~~---~eI~~-Vvt~-----~~~~~~~~~A~~~gIP~~~~~~~~~~~~~ 145 (294)
+++||.++++|+- .-.++++.+... ..+. .+|.- .+.. +.+....+.++++||++- . .++.
T Consensus 6 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s-~-----~ar~ 79 (161)
T 1d1q_A 6 PKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN-H-----KGKQ 79 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCC-C-----CBCB
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCC-c-----eEeE
Confidence 3578888888854 234555555432 1122 33322 2221 233346788999999874 2 2233
Q ss_pred CChhHHHHHHHhcCCcEEEEecc
Q 022631 146 LSPNDLVAALSEVNVDFILLAGY 168 (294)
Q Consensus 146 ~~d~~l~~~L~~~~~DliV~agy 168 (294)
+.+..+ ..+|+||.+.-
T Consensus 80 l~~~~~------~~~DlIl~M~~ 96 (161)
T 1d1q_A 80 IKTKHF------DEYDYIIGMDE 96 (161)
T ss_dssp CCGGGG------GTCSEEEESSH
T ss_pred CCHHHH------hhCCEEEEeCH
Confidence 433321 36899998865
No 199
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.74 E-value=1.2e+02 Score=23.90 Aligned_cols=39 Identities=15% Similarity=0.027 Sum_probs=24.9
Q ss_pred HHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCCCEEEcCC
Q 022631 98 HAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 98 l~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gIP~~~~~~ 138 (294)
+.++..+ ...++.+-.|-.+ ..+..+|.++|||++.++.
T Consensus 33 ~Kai~~g--ka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 33 LRTIEAK--QALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp HHHHHHT--CCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHcC--CceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 3445556 3456655555422 1346899999999998863
No 200
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=23.73 E-value=2.4e+02 Score=24.14 Aligned_cols=37 Identities=14% Similarity=0.224 Sum_probs=28.8
Q ss_pred cHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEe
Q 022631 122 GAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLA 166 (294)
Q Consensus 122 ~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~a 166 (294)
..+.|++.|++++.+. .++.+..+.+.+.++|.|+.-
T Consensus 202 ~v~~~~~~G~~v~~WT--------vn~~~~~~~l~~~GVdgIiTD 238 (252)
T 3qvq_A 202 QVSDIKAAGYKVLAFT--------INDESLALKLYNQGLDAVFSD 238 (252)
T ss_dssp HHHHHHHTTCEEEEEC--------CCCHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHCCCEEEEEc--------CCCHHHHHHHHHcCCCEEEeC
Confidence 4578899999998874 345677788889999998853
No 201
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=23.70 E-value=3.9e+02 Score=23.80 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=53.6
Q ss_pred ceeEEEEEeCCchH---HHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCC-CC-------CCC--
Q 022631 80 KKNLAVFVSGGGSN---FRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD-EP-------NGL-- 146 (294)
Q Consensus 80 ~~rIaVl~SG~gs~---l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~-~~-------~~~-- 146 (294)
++||.++..++++. +..|..++... .++|..+.+.. ..+...+.|+.++.++.... .. ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVAR--GHRVTYAIPPV----FADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLD 80 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHT--TCEEEEEECGG----GHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHC--CCeEEEEeCHH----HHHHHHhCCCEEEEcCCcCccccccccccchhhHH
Confidence 46888875554333 34566665443 35666554322 23556678998887764210 00 000
Q ss_pred -----------ChhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCEEEEcCCC
Q 022631 147 -----------SPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSL 191 (294)
Q Consensus 147 -----------~d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~iNiHPSl 191 (294)
.-..+.+.+++.+||+||.-.+. .....+.....-.++.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~-~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 81 NVEPFLNDAIQALPQLADAYADDIPDLVLHDITS-YPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTC-HHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCEEEECCcc-HHHHHHHHHcCCCEEEEeccc
Confidence 01234566778899999975442 111122222333466665544
No 202
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=23.17 E-value=1.6e+02 Score=26.54 Aligned_cols=77 Identities=8% Similarity=-0.034 Sum_probs=48.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCC---ccHHHHHhC-------CCCEEEcCCCCCCCCCCChh
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDC---GGAEYARDN-------SIPVILFPKTKDEPNGLSPN 149 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~---~~~~~A~~~-------gIP~~~~~~~~~~~~~~~d~ 149 (294)
..|++|++|| --..-+.....+.| .++.++-.+-.+. .+.++|+.. +||+++++. -.
T Consensus 179 ~~kvlvllSG-vDS~vaa~ll~~~G---~~v~~v~~~~~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~---------~~ 245 (307)
T 1vbk_A 179 EGRMIGILHD-ELSALAIFLMMKRG---VEVIPVYIGKDDKNLEKVRSLWNLLKRYSYGSKGFLVVAES---------FD 245 (307)
T ss_dssp TCEEEEECSS-HHHHHHHHHHHHBT---CEEEEEEESCSSHHHHHHHHHHHHHHTTCTTSCCCCEEESS---------HH
T ss_pred CCcEEEEEeC-CcHHHHHHHHHhCC---CeEEEEEEEECHHHHHHHHHHHHHHhhhccCCCCcEEEeCC---------CH
Confidence 4689999999 43333333334454 5788887762221 245677666 899988761 12
Q ss_pred HHHHHHHhcCCcEEEEeccc
Q 022631 150 DLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 150 ~l~~~L~~~~~DliV~agy~ 169 (294)
+..+..++.++|.++...+.
T Consensus 246 ~~~~~A~~~ga~~I~tG~~~ 265 (307)
T 1vbk_A 246 RVLKLIRDFGVKGVIKGLRP 265 (307)
T ss_dssp HHHHHHHHHTCCEEECCCCG
T ss_pred HHHHHHHHcCCCEEEECccc
Confidence 33366677899999877663
No 203
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=22.78 E-value=2.1e+02 Score=24.92 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=14.3
Q ss_pred hhHHHHHHHhcCCcEEEE
Q 022631 148 PNDLVAALSEVNVDFILL 165 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~ 165 (294)
-+++.+.+++.++|+++.
T Consensus 61 ~~~l~~~~~~~~~d~vi~ 78 (331)
T 2pn1_A 61 IDHLLTLCQDEGVTALLT 78 (331)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEe
Confidence 467778888889999885
No 204
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.78 E-value=1.1e+02 Score=22.61 Aligned_cols=40 Identities=23% Similarity=0.342 Sum_probs=24.6
Q ss_pred HHHHHHHHcCCCCceEEEEecCCCCC---ccHHHHHhCCCCEEEc
Q 022631 95 RSIHAACLAGSVYGDVVVLVTNKPDC---GGAEYARDNSIPVILF 136 (294)
Q Consensus 95 ~~ll~~~~~~~~~~eI~~Vvt~~~~~---~~~~~A~~~gIP~~~~ 136 (294)
....++++.|+ ..++.+-.|-+.. .+..+|++++||++.+
T Consensus 21 ~~v~kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 21 NETIRLAKTGG--AKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHTC--CSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCC--ccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 34455666664 4565555553321 2457899999998766
No 205
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=22.41 E-value=3.4e+02 Score=23.39 Aligned_cols=57 Identities=14% Similarity=0.105 Sum_probs=32.6
Q ss_pred CceeEEEE--EeCCchHHHHHHHHHHcCCCCceEEEEe--cCCCCCccHHHHHhCCCCEEEcC
Q 022631 79 KKKNLAVF--VSGGGSNFRSIHAACLAGSVYGDVVVLV--TNKPDCGGAEYARDNSIPVILFP 137 (294)
Q Consensus 79 ~~~rIaVl--~SG~gs~l~~ll~~~~~~~~~~eI~~Vv--t~~~~~~~~~~A~~~gIP~~~~~ 137 (294)
+.+||.|+ +..+|..+....+.++.-. ++++.|+ .+....++.+.-++.|+|++.+-
T Consensus 136 ~Gk~VLIVDDvitTG~Tl~~a~~~L~~~G--a~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~ 196 (234)
T 3m3h_A 136 KGQKVVVVEDLISTGGSAITCVEALREAG--CEVLGIVSIFTYELEAGKEKLEAANVASYSLS 196 (234)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTT--CEEEEEEEEEECCCHHHHHHHHHTTCCEEESS
T ss_pred CCCEEEEEecccchhHHHHHHHHHHHHCC--CEEEEEEEEEECcCchHHHHHHhcCCCEEEEe
Confidence 35677664 2335556666677666432 3444333 23333345567778899998763
No 206
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=22.34 E-value=1.7e+02 Score=25.67 Aligned_cols=90 Identities=18% Similarity=0.110 Sum_probs=47.7
Q ss_pred EEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCC-CCCCCCCChhHHHHHHHhcCCcEE
Q 022631 85 VFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKT-KDEPNGLSPNDLVAALSEVNVDFI 163 (294)
Q Consensus 85 Vl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~-~~~~~~~~d~~l~~~L~~~~~Dli 163 (294)
++.+|+...+..++..... +++.+ ++.++.-......++..|..+..++.. ....-..+-+++.+.+++.++.++
T Consensus 89 ~~~~g~~~a~~~~~~~l~~---~gd~v-l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v 164 (391)
T 3dzz_A 89 VFASGVVPAISAMVRQFTS---PGDQI-LVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMM 164 (391)
T ss_dssp EEESCHHHHHHHHHHHHSC---TTCEE-EECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEE
T ss_pred EECCCHHHHHHHHHHHhCC---CCCeE-EECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEE
Confidence 4445544555555555432 22332 233332234557788899988877642 100001344667777765678888
Q ss_pred EEec----cccccChhHHh
Q 022631 164 LLAG----YLKLIPMELIR 178 (294)
Q Consensus 164 V~ag----y~~ilp~~~l~ 178 (294)
++.. .+.++|.+-++
T Consensus 165 ~i~~p~nptG~~~~~~~l~ 183 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVK 183 (391)
T ss_dssp EEESSBTTTTBCCCHHHHH
T ss_pred EEECCCCCCCcccCHHHHH
Confidence 7654 34566644443
No 207
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=22.26 E-value=1.1e+02 Score=29.00 Aligned_cols=54 Identities=17% Similarity=0.006 Sum_probs=32.5
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC----CccHHHHHhCCCC-EEEc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD----CGGAEYARDNSIP-VILF 136 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~----~~~~~~A~~~gIP-~~~~ 136 (294)
+.|++|.+|||--..-.+.-.... ..+|.++..+... ..+.+.|++.|+| ++.+
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e~---G~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vv 63 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKEQ---GYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIE 63 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHT---TEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEEEcChHHHHHHHHHHHHc---CCEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEE
Confidence 578999999965222222111222 3577776665432 1356889999999 6554
No 208
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=22.25 E-value=2e+02 Score=25.26 Aligned_cols=86 Identities=14% Similarity=0.214 Sum_probs=42.6
Q ss_pred EEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEE
Q 022631 85 VFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFIL 164 (294)
Q Consensus 85 Vl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV 164 (294)
++.+|+...+..++..... +++.+ ++.++.-......++..|+.+..++......-..+.+++.+.+++ ++.+++
T Consensus 94 ~~~~g~~~a~~~~~~~~~~---~gd~v-l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 168 (388)
T 1j32_A 94 LVTNGGKQSIFNLMLAMIE---PGDEV-IIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-KTKLLV 168 (388)
T ss_dssp EEESHHHHHHHHHHHHHCC---TTCEE-EEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEE
T ss_pred EEcCCHHHHHHHHHHHhcC---CCCEE-EEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-CceEEE
Confidence 3444434445555554422 23332 333333334556778889988777643100011233455555543 566666
Q ss_pred Eec----cccccChh
Q 022631 165 LAG----YLKLIPME 175 (294)
Q Consensus 165 ~ag----y~~ilp~~ 175 (294)
+.. .+.++|.+
T Consensus 169 ~~~p~nptG~~~~~~ 183 (388)
T 1j32_A 169 FNTPSNPTGMVYTPD 183 (388)
T ss_dssp EESSCTTTCCCCCHH
T ss_pred EeCCCCCCCcCCCHH
Confidence 544 46666643
No 209
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.88 E-value=1.2e+02 Score=27.31 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=22.1
Q ss_pred eeEEEEEeC-CchHHHHHHHHHHcCCCCceEEEEecCC
Q 022631 81 KNLAVFVSG-GGSNFRSIHAACLAGSVYGDVVVLVTNK 117 (294)
Q Consensus 81 ~rIaVl~SG-~gs~l~~ll~~~~~~~~~~eI~~Vvt~~ 117 (294)
.+|.|.+.| .|.--+.+++.+... ...++++++...
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~ 56 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRK 56 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence 344455557 566666777766543 367898888754
No 210
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=21.70 E-value=1.5e+02 Score=26.36 Aligned_cols=87 Identities=15% Similarity=0.021 Sum_probs=42.7
Q ss_pred EEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEE
Q 022631 85 VFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFIL 164 (294)
Q Consensus 85 Vl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV 164 (294)
++.+|+...+..++..... +++.+ ++.++.-......++..|..+..++......-..+.+++.+.+++ ++.+++
T Consensus 105 ~~~~g~t~al~~~~~~l~~---~gd~V-l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 179 (389)
T 1o4s_A 105 VVTNGAKQALFNAFMALLD---PGDEV-IVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-KTKAVL 179 (389)
T ss_dssp EEESHHHHHHHHHHHHHCC---TTCEE-EEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-TEEEEE
T ss_pred EEecCHHHHHHHHHHHhCC---CCCEE-EEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-CceEEE
Confidence 3444433445555555422 22332 233333334556778889988777642100001233455444533 567776
Q ss_pred Eec----cccccChhH
Q 022631 165 LAG----YLKLIPMEL 176 (294)
Q Consensus 165 ~ag----y~~ilp~~~ 176 (294)
+.. .+.++|.+.
T Consensus 180 ~~~p~nptG~~~~~~~ 195 (389)
T 1o4s_A 180 INSPNNPTGVVYRREF 195 (389)
T ss_dssp EESSCTTTCCCCCHHH
T ss_pred EcCCCCCCCCCCCHHH
Confidence 654 466776433
No 211
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=21.67 E-value=3.8e+02 Score=22.94 Aligned_cols=87 Identities=14% Similarity=0.226 Sum_probs=47.7
Q ss_pred EEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHh-cCCcEE
Q 022631 85 VFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSE-VNVDFI 163 (294)
Q Consensus 85 Vl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~-~~~Dli 163 (294)
++.+|+...+..++..... +++-+ ++.++.-......++..|+.+..++.... ...+-+++.+.+.+ .++.++
T Consensus 72 ~~~~g~~~a~~~~~~~l~~---~gd~v-l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~~~v 145 (354)
T 3ly1_A 72 LLTAGSSEGIRAAIEAYAS---LEAQL-VIPELTYGDGEHFAKIAGMKVTKVKMLDN--WAFDIEGLKAAVAAYSGPSIV 145 (354)
T ss_dssp EEESHHHHHHHHHHHHHCC---TTCEE-EEESSSCTHHHHHHHHTTCEEEEECCCTT--SCCCHHHHHHHHHTCSSCEEE
T ss_pred EEeCChHHHHHHHHHHHhC---CCCeE-EECCCCchHHHHHHHHcCCEEEEecCCCC--CCCCHHHHHHHhccCCCCCEE
Confidence 3444444445555554422 22332 33333334456788899999888875321 22345677777765 578888
Q ss_pred EEec----cccccChhHH
Q 022631 164 LLAG----YLKLIPMELI 177 (294)
Q Consensus 164 V~ag----y~~ilp~~~l 177 (294)
++.. .+.++|.+-+
T Consensus 146 ~l~~p~nptG~~~~~~~l 163 (354)
T 3ly1_A 146 YLVNPNNPTGTITPADVI 163 (354)
T ss_dssp EEESSCTTTCCCCCHHHH
T ss_pred EEeCCCCCcCCCcCHHHH
Confidence 8633 2455665433
No 212
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=21.57 E-value=1.6e+02 Score=27.63 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=42.1
Q ss_pred CchHHHHHHHHHHcCCCCceEEEEecCCCCCcc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEE
Q 022631 90 GGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILL 165 (294)
Q Consensus 90 ~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ 165 (294)
.|+.+..|..+...|+ .++|.+.= .+|...+ .....+.|||+..+. |..+-..+++..+|.+|+
T Consensus 191 ~gTal~~l~~A~~~gk-~~~V~v~E-tRP~~qG~rltA~eL~~~GIpvtlI~----------Dsa~~~~M~~~~Vd~ViV 258 (374)
T 2yvk_A 191 YGTALAPFYLAKQKDL-GLHIYACE-TRPVLQGSRLTAWELMQGGIDVTLIT----------DSMAAHTMKEKQISAVIV 258 (374)
T ss_dssp SCSTTHHHHHHHHTTC-CCEEEEEC-CTTTTHHHHTHHHHHHTTTCEEEEEC----------GGGHHHHHHHTTCCEEEE
T ss_pred CcHHHHHHHHHHHcCC-EEEEEEeC-CCCccccHHHHHHHHHHcCCCEEEEe----------hhHHHHHhhhcCCCEEEE
Confidence 3677777766666654 44544332 3444333 233456799998875 345556677778998886
Q ss_pred ecccccc
Q 022631 166 AGYLKLI 172 (294)
Q Consensus 166 agy~~il 172 (294)
|--++.
T Consensus 259 -GAD~V~ 264 (374)
T 2yvk_A 259 -GADRIA 264 (374)
T ss_dssp -CCSEEE
T ss_pred -CccEEe
Confidence 444554
No 213
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=21.39 E-value=3.6e+02 Score=23.25 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=16.3
Q ss_pred EEEeCC-chHHHHHHHHHHcCCCCceEEEEecC
Q 022631 85 VFVSGG-GSNFRSIHAACLAGSVYGDVVVLVTN 116 (294)
Q Consensus 85 Vl~SG~-gs~l~~ll~~~~~~~~~~eI~~Vvt~ 116 (294)
||++|+ |-.-..|...+... .++|.++.-+
T Consensus 22 vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~ 52 (347)
T 4id9_A 22 ILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLR 52 (347)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred EEEECCCChHHHHHHHHHHhC--CCEEEEEeCC
Confidence 455564 54455666665543 2467665443
No 214
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=21.38 E-value=2.9e+02 Score=24.52 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=44.8
Q ss_pred CCceeEEEEEeCCc--hHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHH
Q 022631 78 IKKKNLAVFVSGGG--SNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAAL 155 (294)
Q Consensus 78 ~~~~rIaVl~SG~g--s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L 155 (294)
....+|+||=||-| |.++.|.+.. .+.+++.+- + ..+.|+=. + .++.-...-.+..+.|
T Consensus 22 ~~~~~IgvfDSGvGGLtv~~~i~~~l----P~e~~iy~~-D-----------~a~~PYG~--k-s~e~i~~~~~~~~~~L 82 (274)
T 3uhf_A 22 SNAMKIGVFDSGVGGLSVLKSLYEAR----LFDEIIYYG-D-----------TARVPYGV--K-DKDTIIKFCLEALDFF 82 (274)
T ss_dssp CSCCEEEEEESSSTTHHHHHHHHHTT----CCSEEEEEE-C-----------TTTCCCTT--S-CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCChHHHHHHHHHHC----CCCCEEEEe-c-----------CCCCCCCC--C-CHHHHHHHHHHHHHHH
Confidence 34679999999944 5566655542 123454432 2 22222210 0 0000000012445677
Q ss_pred HhcCCcEEEEeccc-ccc-ChhHHhcCCCCEEE
Q 022631 156 SEVNVDFILLAGYL-KLI-PMELIRAYPRSIVN 186 (294)
Q Consensus 156 ~~~~~DliV~agy~-~il-p~~~l~~~~~g~iN 186 (294)
++.++|++|++... .-. =+.+-+.++..+|+
T Consensus 83 ~~~g~d~IVIACNTa~~~al~~lr~~~~iPvig 115 (274)
T 3uhf_A 83 EQFQIDMLIIACNTASAYALDALRAKAHFPVYG 115 (274)
T ss_dssp TTSCCSEEEECCHHHHHHSHHHHHHHCSSCEEC
T ss_pred HHCCCCEEEEeCCChhHHHHHHHHHhcCCCEEc
Confidence 88899999988653 211 13444555555664
No 215
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=21.08 E-value=3e+02 Score=24.03 Aligned_cols=88 Identities=8% Similarity=0.060 Sum_probs=48.0
Q ss_pred EEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEE
Q 022631 85 VFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFIL 164 (294)
Q Consensus 85 Vl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV 164 (294)
++.+|+...+..++..... +++.+.+ .++.-......++..|..+..++.... -..+-+++.+.+++.++.+++
T Consensus 96 ~~~~G~~~al~~~~~~l~~---~gd~Vl~-~~~~y~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~ 169 (369)
T 3cq5_A 96 WAANGSNEILQQLLQAFGG---PGRTALG-FQPSYSMHPILAKGTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVF 169 (369)
T ss_dssp EEESHHHHHHHHHHHHHCS---TTCEEEE-EESSCTHHHHHHHHTTCEEEEEECCTT--SSCCHHHHHHHHHHHCCSEEE
T ss_pred EECCChHHHHHHHHHHhcC---CCCEEEE-cCCChHHHHHHHHHcCCEEEEecCCcC--CCCCHHHHHHHhhccCCCEEE
Confidence 4444444455555555432 2233333 223233445678888988877763211 123445666667655788887
Q ss_pred Eec----cccccChhHHh
Q 022631 165 LAG----YLKLIPMELIR 178 (294)
Q Consensus 165 ~ag----y~~ilp~~~l~ 178 (294)
+.. .+.++|.+-+.
T Consensus 170 ~~~~~nptG~~~~~~~l~ 187 (369)
T 3cq5_A 170 VTTPNNPTGDVTSLDDVE 187 (369)
T ss_dssp EESSCTTTCCCCCHHHHH
T ss_pred EeCCCCCCCCCCCHHHHH
Confidence 743 36677765544
No 216
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=21.06 E-value=3.8e+02 Score=23.39 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=39.3
Q ss_pred CCCceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCC-------Ccc---HHHHHhCCCCEEEcCCCCCCCCCC
Q 022631 77 GIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPD-------CGG---AEYARDNSIPVILFPKTKDEPNGL 146 (294)
Q Consensus 77 ~~~~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~-------~~~---~~~A~~~gIP~~~~~~~~~~~~~~ 146 (294)
+...+||+++ +.+... ++.++ | ..+++|-...++ ... .+.+...++|.+-.. . .
T Consensus 43 ~~~p~RIV~l---~~~~~e-~l~aL--G---~~~vgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~----~---~ 106 (326)
T 3tlk_A 43 ESQPQRIVST---SVTLTG-SLLAI--D---APVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIG----E---P 106 (326)
T ss_dssp CSCCSSEEES---CHHHHH-HHHHT--T---CCEEEEEECCTTSTTBCTTSCBGGGHHHHHHTTCEEEEES----S---C
T ss_pred CCCCcEEEEE---CcchHH-HHHhC--C---CCeeEEeeccccccccCccchhhhhhhhhhccCCCccCCC----C---C
Confidence 4457899888 333343 33332 2 247776543211 111 222344688876421 1 1
Q ss_pred ChhHHHHHHHhcCCcEEEEeccc
Q 022631 147 SPNDLVAALSEVNVDFILLAGYL 169 (294)
Q Consensus 147 ~d~~l~~~L~~~~~DliV~agy~ 169 (294)
+ +|.|.+.+|||||...+.
T Consensus 107 n----~E~I~~l~PDLIi~~~~~ 125 (326)
T 3tlk_A 107 S----AEAVAAQMPDLILISATG 125 (326)
T ss_dssp C----HHHHHTTCCSEEEEESSS
T ss_pred C----HHHHhhCCCCEEEEeCCC
Confidence 1 356778999999987653
No 217
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=21.02 E-value=3.4e+02 Score=24.30 Aligned_cols=51 Identities=20% Similarity=0.084 Sum_probs=30.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEE
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVI 134 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~ 134 (294)
+.||+|+.. |.--+.++..+.. ....++++|.... .....++++..|++++
T Consensus 2 ~irVgIiG~--G~iG~~~~r~l~~-~~~~elvav~d~~-~~~~~~~~~~~g~~~~ 52 (334)
T 2czc_A 2 KVKVGVNGY--GTIGKRVAYAVTK-QDDMELIGITKTK-PDFEAYRAKELGIPVY 52 (334)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHT-CTTEEEEEEEESS-CSHHHHHHHHTTCCEE
T ss_pred CcEEEEEeE--hHHHHHHHHHHhc-CCCCEEEEEEcCC-HHHHHHHHHhcCcccc
Confidence 468888844 4444455555443 2256887776533 2234567778887754
No 218
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.00 E-value=2.3e+02 Score=21.77 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=34.6
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHH-hCCCCEEEcCCCCCCCCCCChhHHHHHHHhc
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYAR-DNSIPVILFPKTKDEPNGLSPNDLVAALSEV 158 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~-~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~ 158 (294)
..+|+|+ |.|..-..+...+... ..+|.++-.++ + ..+.++ +.|+.++..+. .+.+.++...-.
T Consensus 19 ~~~v~Ii--G~G~iG~~la~~L~~~--g~~V~vid~~~-~--~~~~~~~~~g~~~~~~d~--------~~~~~l~~~~~~ 83 (155)
T 2g1u_A 19 SKYIVIF--GCGRLGSLIANLASSS--GHSVVVVDKNE-Y--AFHRLNSEFSGFTVVGDA--------AEFETLKECGME 83 (155)
T ss_dssp CCEEEEE--CCSHHHHHHHHHHHHT--TCEEEEEESCG-G--GGGGSCTTCCSEEEESCT--------TSHHHHHTTTGG
T ss_pred CCcEEEE--CCCHHHHHHHHHHHhC--CCeEEEEECCH-H--HHHHHHhcCCCcEEEecC--------CCHHHHHHcCcc
Confidence 4566666 5565555555554432 23555443322 1 123344 56776554321 122333221123
Q ss_pred CCcEEEEec
Q 022631 159 NVDFILLAG 167 (294)
Q Consensus 159 ~~DliV~ag 167 (294)
++|++|.+-
T Consensus 84 ~ad~Vi~~~ 92 (155)
T 2g1u_A 84 KADMVFAFT 92 (155)
T ss_dssp GCSEEEECS
T ss_pred cCCEEEEEe
Confidence 688888764
No 219
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=20.84 E-value=1.2e+02 Score=22.63 Aligned_cols=41 Identities=7% Similarity=0.052 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCCCceEEEEecCCCCC---ccHHHHHhCCCCEEEcC
Q 022631 95 RSIHAACLAGSVYGDVVVLVTNKPDC---GGAEYARDNSIPVILFP 137 (294)
Q Consensus 95 ~~ll~~~~~~~~~~eI~~Vvt~~~~~---~~~~~A~~~gIP~~~~~ 137 (294)
....++++.|+ ..++.+-.|-++. .+..+|+..+||++.+.
T Consensus 25 ~~v~kai~~gk--a~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 25 DLVIKEIRNAR--AKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp HHHHHHHHTTC--CSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred hhhHHHHhcCc--eeEEEEeccccccchhhhcccccccCCCeeeec
Confidence 34455667774 4565555443321 24578999999998874
No 220
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=20.84 E-value=1.3e+02 Score=24.79 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=9.4
Q ss_pred CceeEEEEEeCC
Q 022631 79 KKKNLAVFVSGG 90 (294)
Q Consensus 79 ~~~rIaVl~SG~ 90 (294)
++.|++|+.+|.
T Consensus 4 ~~~rv~IistGd 15 (178)
T 2pbq_A 4 KKAVIGVVTISD 15 (178)
T ss_dssp -CCEEEEEEECH
T ss_pred CCCEEEEEEeCC
Confidence 468999999884
No 221
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=20.67 E-value=1.1e+02 Score=22.74 Aligned_cols=37 Identities=8% Similarity=0.123 Sum_probs=27.0
Q ss_pred hhHHHHHHHhcCCcEEEEeccccccChhHHhcCCCCE
Q 022631 148 PNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSI 184 (294)
Q Consensus 148 d~~l~~~L~~~~~DliV~agy~~ilp~~~l~~~~~g~ 184 (294)
.+++++..++.++|++|+...++-+...++...+..+
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~~PV 134 (138)
T 1q77_A 98 SEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLNLAS 134 (138)
T ss_dssp HHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSSSEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCCCce
Confidence 4678888888999999998877655566666554433
No 222
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=20.54 E-value=77 Score=28.00 Aligned_cols=52 Identities=19% Similarity=0.215 Sum_probs=30.2
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCCC
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKT 139 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~~ 139 (294)
.+||||. +|+|..+ +-++...| ++ +.||-.-.--....|++.|+.++...+.
T Consensus 177 I~rVAv~-~GsG~~~--~~~a~~~g---aD--~~ITGd~~~h~~~~A~e~gi~~i~~GH~ 228 (267)
T 2fyw_A 177 ISRVAIC-GGSGQSF--YKDALAKG---AD--VYITGDIYYHTAQDMLSDGLLALDPGHY 228 (267)
T ss_dssp EEEEEEE-SSSCGGG--HHHHHHTT---CS--EEEESCCCHHHHHHHHHTTCEEEECCGG
T ss_pred eeEEEEE-cCCCHHH--HHHHHHcC---CC--EEEEccCcHHHHHHHHHCCCeEEECCcH
Confidence 6788886 5655543 22333333 22 4556433222346788999999888763
No 223
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=20.51 E-value=2.9e+02 Score=24.21 Aligned_cols=52 Identities=12% Similarity=0.165 Sum_probs=29.6
Q ss_pred eeEEEEEeCCchHH---HHHHHHHHcCCCCceEEEEecCCCCCccHHHHHhCCCCEEEcCC
Q 022631 81 KNLAVFVSGGGSNF---RSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138 (294)
Q Consensus 81 ~rIaVl~SG~gs~l---~~ll~~~~~~~~~~eI~~Vvt~~~~~~~~~~A~~~gIP~~~~~~ 138 (294)
+||.++..++++.. .+|.+++.+. .++|..+ +.. ...+.....|++++.++.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~--Gh~V~~~-~~~---~~~~~~~~~g~~~~~~~~ 55 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNA--GHQVVMA-ANQ---DMGPVVTGVGLPAVATTD 55 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT--TCEEEEE-ECG---GGHHHHHHTTCCEEESCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHC--CCEEEEE-eCH---HHHHHHHhCCCEEEEeCC
Confidence 36777766554443 3455555432 3566554 432 234566778999887754
No 224
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=20.50 E-value=1.7e+02 Score=25.46 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=25.9
Q ss_pred ceeEEEEEeCCchHHHHHHHHHHcCCC-CceEEEEecCCCCCccHHHHHhCCCCE
Q 022631 80 KKNLAVFVSGGGSNFRSIHAACLAGSV-YGDVVVLVTNKPDCGGAEYARDNSIPV 133 (294)
Q Consensus 80 ~~rIaVl~SG~gs~l~~ll~~~~~~~~-~~eI~~Vvt~~~~~~~~~~A~~~gIP~ 133 (294)
++||+|+ |.|.--.++...+..... ..+|. ++++......+++++.|+.+
T Consensus 3 ~~~I~iI--G~G~mG~aia~~l~~~g~~~~~V~--v~dr~~~~~~~l~~~~gi~~ 53 (280)
T 3tri_A 3 TSNITFI--GGGNMARNIVVGLIANGYDPNRIC--VTNRSLDKLDFFKEKCGVHT 53 (280)
T ss_dssp CSCEEEE--SCSHHHHHHHHHHHHTTCCGGGEE--EECSSSHHHHHHHHTTCCEE
T ss_pred CCEEEEE--cccHHHHHHHHHHHHCCCCCCeEE--EEeCCHHHHHHHHHHcCCEE
Confidence 5789988 555444555555544322 12443 44544333444555557654
No 225
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=20.31 E-value=2.2e+02 Score=26.24 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHcCCCCceEEEEecCCCCCcc----HHHHHhCCCCEEEcCCCCCCCCCCChhHHHHHHHhcCCcEEEEec
Q 022631 92 SNFRSIHAACLAGSVYGDVVVLVTNKPDCGG----AEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAG 167 (294)
Q Consensus 92 s~l~~ll~~~~~~~~~~eI~~Vvt~~~~~~~----~~~A~~~gIP~~~~~~~~~~~~~~~d~~l~~~L~~~~~DliV~ag 167 (294)
+.+..|..+...|+ .++|.+.= .+|...+ .....+.|||+..+. |...-..+++..+|.+|+ |
T Consensus 168 tvl~~l~~A~~~gk-~~~V~v~E-tRP~~qG~rlta~eL~~~GI~vtlI~----------Dsa~~~~M~~~~Vd~Viv-G 234 (347)
T 1t9k_A 168 TALGVIRAAVESGK-RIRVFADE-TRPYLQGARLTAWELMKDGIEVYVIT----------DNMAGWLMKRGLIDAVVV-G 234 (347)
T ss_dssp SHHHHHHHHHHTTC-CEEEEEEC-CTTTTHHHHTHHHHHHTTTCEEEEEC----------GGGHHHHHHTTCCSEEEE-C
T ss_pred HHHHHHHHHHHCCC-eEEEEEeC-CCCccccHHHHHHHHHhCCCCEEEEe----------hhHHHHHhhcCCCCEEEE-C
Confidence 67766666666554 34443322 2343322 234456799998875 345556677777998886 4
Q ss_pred ccccc
Q 022631 168 YLKLI 172 (294)
Q Consensus 168 y~~il 172 (294)
--++.
T Consensus 235 Ad~V~ 239 (347)
T 1t9k_A 235 ADRIA 239 (347)
T ss_dssp CSEEE
T ss_pred ccEEe
Confidence 44554
No 226
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=20.04 E-value=98 Score=22.75 Aligned_cols=14 Identities=36% Similarity=0.240 Sum_probs=12.0
Q ss_pred cHHHHHhCCCCEEE
Q 022631 122 GAEYARDNSIPVIL 135 (294)
Q Consensus 122 ~~~~A~~~gIP~~~ 135 (294)
+.++|+++|||++.
T Consensus 32 I~~~A~e~~VPi~e 45 (83)
T 3bzy_B 32 IIKLAELYDIPVIE 45 (83)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEe
Confidence 46889999999986
Done!