BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022634
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna
unguiculata GN=PUR3 PE=2 SV=2
Length = 312
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/311 (61%), Positives = 226/311 (72%), Gaps = 18/311 (5%)
Query: 1 MEANSFLS--------GSTIPLIQTP--------RKLPSLSFAQSHS--HLSASFRAHKL 42
MEA +S +IP+++ P L S F QS + + + A
Sbjct: 1 MEAQQIISRFCPKSSLAPSIPMVKQPFSLNFPPLHSLSSYPFLQSQNLGFPTGALHAISF 60
Query: 43 LVPQSLRSSRRLECVNFAEKVKNNGDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACL 102
+ + SS R+ C + + +E +++K LAVFVSGGGSNFRSIH A
Sbjct: 61 VHKEVCSSSWRIWCSKSSSSTAEPEEDHEVRAQVTVRRKKLAVFVSGGGSNFRSIHEASK 120
Query: 103 AGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDF 162
GS++GDV VLVTNK +CGGA+YAR+N IPVILFPK KDEP GLSP DLV L + VDF
Sbjct: 121 KGSLHGDVTVLVTNKSECGGAQYARNNGIPVILFPKAKDEPKGLSPCDLVDTLRKFEVDF 180
Query: 163 ILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIH 222
+LLAGYLKLIP+ELIRA+ RSI NIHPSLLPAFGGKGYYGMKVHKAVIASGAR+SGPTIH
Sbjct: 181 VLLAGYLKLIPVELIRAFERSIFNIHPSLLPAFGGKGYYGMKVHKAVIASGARFSGPTIH 240
Query: 223 FVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVP 282
FVDEHYDTGRILAQRVVPVL NDTAE+LAARVL EEH+LYV+V ALCEER+VWR+DGVP
Sbjct: 241 FVDEHYDTGRILAQRVVPVLANDTAEELAARVLNEEHQLYVEVVEALCEERIVWRKDGVP 300
Query: 283 VIRSKENPDEF 293
+I+S+ENP+EF
Sbjct: 301 LIQSRENPNEF 311
>sp|P52422|PUR3_ARATH Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Arabidopsis thaliana GN=PUR3 PE=2 SV=2
Length = 292
Score = 327 bits (837), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 184/216 (85%), Gaps = 1/216 (0%)
Query: 79 KKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPK 138
++K LAVFVSGGGSNFR IH C GSV GDVV+LVTNK DCGGAEYAR N IPV++FPK
Sbjct: 76 RRKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYARSNGIPVLVFPK 135
Query: 139 TKDEP-NGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGG 197
K EP +GLSP++LV L + VDF+LLAGYLKLIP+EL++A+P+ I+NIHP+LLPAFGG
Sbjct: 136 AKREPSDGLSPSELVDVLRKYGVDFVLLAGYLKLIPVELVQAFPKRILNIHPALLPAFGG 195
Query: 198 KGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLE 257
KG YG+KVHKAV+ SGARYSGPTIHFV+E YDTGRILAQ V V+ NDT E+LA RVL E
Sbjct: 196 KGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRILAQSAVRVIANDTPEELAKRVLHE 255
Query: 258 EHRLYVDVASALCEERVVWREDGVPVIRSKENPDEF 293
EH+LYV+V A+CEER+ WREDGVP+I++K+NPDE+
Sbjct: 256 EHKLYVEVVGAICEERIKWREDGVPLIQNKQNPDEY 291
>sp|Q42805|PUR3_SOYBN Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Glycine max GN=PUR3 PE=2 SV=1
Length = 295
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/248 (60%), Positives = 182/248 (73%), Gaps = 12/248 (4%)
Query: 50 SSRRLECVNFAEKVKNNGDKYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGD 109
S +R+ C + + + +E +++K L VFVSGGG+NFR+IH A GS++GD
Sbjct: 55 SCKRIWCSSSSSSTAEPKEGHEVRAQVTVRRKKLGVFVSGGGTNFRAIHEATKRGSLHGD 114
Query: 110 VVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYL 169
V+VLVTNK DCGGAEYAR+N IPVIL+ +KDE NG +DLV L + VDFILLAGYL
Sbjct: 115 VLVLVTNKSDCGGAEYARNNGIPVILYHISKDESNG---SDLVDTLRKFEVDFILLAGYL 171
Query: 170 KLIPME---LIRAYPRSIVNIHPSLLPA-FGGKGYYGMKVHKAVIASGARYSGPTIHFVD 225
L L + Y + H S+ + F +G +GMKVHKAVIASGAR+SGPTIHFVD
Sbjct: 172 NLYQWNDPSLQKIYIQ-----HSSITSSSFWRQGIHGMKVHKAVIASGARFSGPTIHFVD 226
Query: 226 EHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDGVPVIR 285
EHYDTGRILAQRVVPV NDT E+LAARVL EEH+LYV+V ALCEERVVWR+DGVP+I+
Sbjct: 227 EHYDTGRILAQRVVPVQANDTVEELAARVLKEEHQLYVEVVEALCEERVVWRQDGVPLIQ 286
Query: 286 SKENPDEF 293
SKENP+EF
Sbjct: 287 SKENPNEF 294
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK 140
K +AV +SG G+N ++I AC +G + + +++NK D G A+ IP +F + K
Sbjct: 2 KKIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNKADAYGLVRAKQAQIPQAVFLR-K 60
Query: 141 DEPNGLSPNDLVAA-LSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKG 199
+ N L +D + L + VD I+LAGY+K++ + + + I+NIHPSLLP
Sbjct: 61 NFSNNLEMDDAIGDYLQSLAVDLIVLAGYMKILTPKFTQRFAGKILNIHPSLLPK----- 115
Query: 200 YYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEH 259
Y G+ ++ I +G G T+HFV+E D G I+ Q VP+ D+ E++ AR +E+
Sbjct: 116 YAGLNTYQRAIEAGDNEHGTTVHFVNEEVDGGAIVLQAKVPIFPEDSIEEVEARTREQEY 175
Query: 260 RLYVDVASALCEERVVWRED 279
++Y V E R+ +++
Sbjct: 176 QIYPLVIKWFTEGRLRLKDN 195
>sp|P00967|PUR2_DROME Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
melanogaster GN=ade3 PE=1 SV=2
Length = 1353
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 79 KKKNLAVFVSGGGSNFRSIHAACL--AGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILF 136
++K +AV +SG GSN +++ A A ++ DVV++++NKP G + A IP ++
Sbjct: 1152 RRKRVAVLISGTGSNLQALIDATRDSAQGIHADVVLVISNKPGVLGLQRATQAGIPSLVI 1211
Query: 137 PKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFG 196
+ +L L VD I LAG+++++ +R + +VNIHPSLLP
Sbjct: 1212 SHKDFASREVYDAELTRNLKAARVDLICLAGFMRVLSAPFVREWRGRLVNIHPSLLPK-- 1269
Query: 197 GKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLL 256
Y G+ V K + +G + SG T+HFVDE DTG I+ Q VP+L +D + L R+
Sbjct: 1270 ---YPGLHVQKQALEAGEKESGCTVHFVDEGVDTGAIIVQAAVPILPDDDEDSLTQRIHK 1326
Query: 257 EEH 259
EH
Sbjct: 1327 AEH 1329
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus
GN=Gart PE=2 SV=3
Length = 1010
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 10/235 (4%)
Query: 51 SRRLECVNFAEKVKNNGDK-----YEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLAGS 105
S R+ N E ++ NG + +F KK +AV +SG GSN +++ +
Sbjct: 773 SPRVRVKNLIETIQTNGSLVANGFLKSNFPVQQKKARVAVLISGTGSNLQALIDSTRDPK 832
Query: 106 VYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILL 165
+V++++NK G + A IP + + N + L E +VD + L
Sbjct: 833 SSSHIVLVISNKAAVAGLDRAERAGIPTRVINHKLYKNRVEFDNAVDHVLEEFSVDIVCL 892
Query: 166 AGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVD 225
AG+++++ +R + ++NIHPSLLP+F G H+ V+ +G +G T+HFV
Sbjct: 893 AGFMRILSGPFVRKWDGKMLNIHPSLLPSFKGS-----NAHEQVLEAGVTITGCTVHFVA 947
Query: 226 EHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVVWREDG 280
E D G+I+ Q VPV DT L+ RV + EH+++ + V REDG
Sbjct: 948 EDVDAGQIILQEAVPVRRGDTVATLSERVKVAEHKIFPAALQLVASGAVQLREDG 1002
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 49 RSSRRLECVNFAEKVKNNGDKYEKD-----FDSGIKKKNLAVFVSGGGSNFRSIHAACLA 103
+ S R++ + E ++ NG E F KK +AV +SG GSN +++ +
Sbjct: 771 KGSPRVKVEHLIETMQINGSVLENGTLRNHFSVQPKKARVAVLISGTGSNLQALIDSTRE 830
Query: 104 GSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFI 163
S +V++++NK G + A IP + + + L E + D +
Sbjct: 831 PSSLAHIVIVISNKAAVAGLDKAEKAGIPTRVINHKLYKNRAAFDTAIDEVLEEFSTDIV 890
Query: 164 LLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHF 223
LAG+++++ +R + ++NIHPSLLP+F G H+ V+ +G +G T+HF
Sbjct: 891 CLAGFMRILSGPFVRKWNGKMLNIHPSLLPSFKGS-----NAHEQVLDAGVTVTGCTVHF 945
Query: 224 VDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLY 262
V E D G+I+ Q VPV DT E L+ RV L EH+++
Sbjct: 946 VAEDVDAGQIILQEAVPVKRGDTVETLSERVKLAEHKIF 984
>sp|P16340|PUR2_DROPS Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
pseudoobscura pseudoobscura GN=ade3 PE=3 SV=2
Length = 1364
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 7/182 (3%)
Query: 80 KKNLAVFVSGGGSNFRSIHAACL--AGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFP 137
+K +AV +SG GSN +++ A A VY ++V++++NK G E A IP ++
Sbjct: 1155 RKRVAVLISGKGSNLQALIDAIRDSAQGVYAEIVLVISNKAGVLGLERAAKAGIPSMVIS 1214
Query: 138 KTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGG 197
+ +L L V+FI LAG+++++ + +R + ++NIHPSLLP F
Sbjct: 1215 HKDFPSREVYDVELTRHLKTARVEFICLAGFMRILSVPFVREWRGRLINIHPSLLPKF-- 1272
Query: 198 KGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLE 257
G+ V K + +G SG T+H+VDE DTG I+ Q VP+L D E L R+
Sbjct: 1273 ---PGLHVQKQALEAGETESGCTVHYVDEGVDTGAIIVQAAVPILPGDDEETLTQRIHYA 1329
Query: 258 EH 259
EH
Sbjct: 1330 EH 1331
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 21/230 (9%)
Query: 34 SASFRAHKLLVPQSLRSSRRLECVNFAE-KVKNNGDKYEKDFDSGIKKKNLAVFVSGGGS 92
SA + H LL Q+L+++R L + + K++ N K +AV +SG G+
Sbjct: 771 SAHVKVHNLL--QALQANRSLSVHSHIQGKIQTN-------------KVKVAVLISGTGT 815
Query: 93 NFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSPNDLV 152
N ++ + + + ++V++V+NK G A IP + + + +
Sbjct: 816 NLEALINSTKKPTSFAEIVLVVSNKAGVEGLRKAERAGIPTRVIDHKQYGSRTEFDSAVD 875
Query: 153 AALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIAS 212
L E +V+ I LAG+++++ ++ + I+NIHPSLLP+F G HK V+ +
Sbjct: 876 RVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSF-----KGANAHKLVLEA 930
Query: 213 GARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLY 262
G R +G T+HFV E D G I+ Q VPV DT E L+ RV EHR +
Sbjct: 931 GVRVTGCTVHFVAEEVDAGAIIFQEAVPVKIGDTVETLSERVKEAEHRAF 980
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK 140
K AVF SG GSNF +I + +LV +KP E A IP F
Sbjct: 2 KKFAVFASGNGSNFEAIVTRLKEENWDASAALLVCDKPQAKVIERAEAFHIPSFAFEPKS 61
Query: 141 DEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
E ++ L V+ I LAGY++LI L++AY I+NIHPSLLPAF G
Sbjct: 62 YENKAAFEQAIIEQLRLHEVELIALAGYMRLIGDTLLQAYGGKIINIHPSLLPAFPGIDA 121
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHR 260
G +G + +G T+H+VDE DTG I+AQ+ + + +DT E + R+ EH+
Sbjct: 122 VGQ-----AFRAGVKVAGITVHYVDEGMDTGPIIAQKAIEIDEHDTLETIEQRIHKLEHK 176
Query: 261 LYVDVASAL 269
Y V L
Sbjct: 177 WYPSVIKQL 185
>sp|P08179|PUR3_ECOLI Phosphoribosylglycinamide formyltransferase OS=Escherichia coli
(strain K12) GN=purN PE=1 SV=1
Length = 212
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
N+ V +SG GSN ++I AC + G V + +NK D G E AR I +
Sbjct: 2 NIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAF 61
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ +L+ + D ++LAG+++++ + Y ++NIHPSLLP Y
Sbjct: 62 DSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPK-----YP 116
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G+ H+ + +G G ++HFV + D G ++ Q VPV D+ +D+ ARV +EH +
Sbjct: 117 GLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAI 176
Query: 262 YVDVASALCEERVVWRED 279
Y V S + R+ E+
Sbjct: 177 YPLVISWFADGRLKMHEN 194
>sp|Q8CT28|PUR3_STAES Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=purN PE=3 SV=1
Length = 188
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTK 140
N+A+F SG GSNF +I G + G +V L T+ + A++ +IP+ +
Sbjct: 3 NIAIFASGSGSNFENIVKHIQTGQLSGINVTALYTDNEGVPCIDRAKNLNIPIHINKPKD 62
Query: 141 DEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
L L+ LS V +I+LAGY++L+ +L++AY I+NIHPSLLP F G
Sbjct: 63 FSSKSLYEQHLLKLLSSEEVQWIVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKGLDA 122
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHR 260
G + SG +G T+H+VD DTG I+ Q+ + +DT E L RV E+
Sbjct: 123 IGQ-----ALESGDTVTGSTVHYVDSGMDTGEIIEQQQCDIKPDDTKEQLEDRVKHLEYE 177
Query: 261 LY 262
LY
Sbjct: 178 LY 179
>sp|Q5HQ98|PUR3_STAEQ Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=purN PE=3
SV=1
Length = 188
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTK 140
N+A+F SG GSNF +I G + G +V L T+ + A++ +IP+ +
Sbjct: 3 NIAIFASGSGSNFENIVKHIQTGQLSGINVTALYTDNEGVPCIDRAKNLNIPIHINKPKD 62
Query: 141 DEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
L L+ LS V +I+LAGY++L+ +L++AY I+NIHPSLLP F G
Sbjct: 63 FSSKSLYEQHLLKLLSSEEVQWIVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKGLDA 122
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHR 260
G + SG +G T+H+VD DTG I+ Q+ + +DT E L RV E+
Sbjct: 123 IGQ-----ALESGDTVTGSTVHYVDSGMDTGEIIEQQQCDIKPDDTKEQLEDRVKHLEYE 177
Query: 261 LY 262
LY
Sbjct: 178 LY 179
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo
sapiens GN=GART PE=1 SV=1
Length = 1010
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 14/221 (6%)
Query: 49 RSSRRLECVNFAEKVKNNGD-----KYEKDFDSGIKKKNLAVFVSGGGSNFRSIHAACLA 103
S R++ N E ++ NG F KK +AV +SG GSN +++ +
Sbjct: 771 EGSPRVKVKNLIESMQINGSVLKNGSLTNHFSFEKKKARVAVLISGTGSNLQALIDSTRE 830
Query: 104 GSVYGDVVVLVTNKPDCGGAEYARDNSIP--VILFPKTKDEPNGLSPNDLVAALSEVNVD 161
+ + ++++NK G + A IP VI K+ S DLV L E ++D
Sbjct: 831 PNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLV--LEEFSID 888
Query: 162 FILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTI 221
+ LAG+++++ ++ + ++NIHPSLLP+F G H+ + +G +G T+
Sbjct: 889 IVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGS-----NAHEQALETGVTVTGCTV 943
Query: 222 HFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLY 262
HFV E D G+I+ Q VPV DT L+ RV L EH+++
Sbjct: 944 HFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIF 984
>sp|Q5HH12|PUR3_STAAC Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain COL) GN=purN PE=3 SV=1
Length = 188
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ LV L+E V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 DSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASALCE 271
Y V + + +
Sbjct: 179 YPSVIAKIVK 188
>sp|Q8NX89|PUR3_STAAW Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MW2) GN=purN PE=3 SV=1
Length = 188
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ LV+ L+E V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 DSKAAYEQHLVSLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASAL 269
Y V + +
Sbjct: 179 YPSVIAKI 186
>sp|Q6GAE1|PUR3_STAAS Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MSSA476) GN=purN PE=3 SV=1
Length = 188
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ LV+ L+E V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 DSKAAYEQHLVSLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASAL 269
Y V + +
Sbjct: 179 YPSVIAKI 186
>sp|Q26255|PUR2_CHITE Trifunctional purine biosynthetic protein adenosine-3 OS=Chironomus
tentans GN=GART PE=3 SV=1
Length = 1371
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSV--YGDVVVLVTNKPDCGGAEYARDNSIPVIL 135
I KK + V +SG GSN +++ A + ++ ++V +++NK G E A +IP +
Sbjct: 1167 IPKKRVGVLISGSGSNLQALIDATKSTNMGMCSEIVFVLSNKAGIFGLERAAKANIPSTV 1226
Query: 136 FPK----TKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSL 191
T++ + N+L+ NV+ I LAG+++++ + + ++NIHPSL
Sbjct: 1227 ISNKDYATREAFDVALHNELIKH----NVEIICLAGFMRILTPCFVNKWKGKLLNIHPSL 1282
Query: 192 LPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLA 251
LP Y G+ K + SG SG T+HFVDE+ DTG I+ Q +VP+ NDT E L
Sbjct: 1283 LPK-----YKGITAQKDALESGDNESGCTVHFVDENVDTGAIIVQEIVPIFENDTVESLT 1337
Query: 252 ARVLLEEH 259
R+ + EH
Sbjct: 1338 ERIHVAEH 1345
>sp|Q6GI12|PUR3_STAAR Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MRSA252) GN=purN PE=3 SV=1
Length = 188
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 6/190 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
LV L+E V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 GSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDSGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASALCE 271
Y V + + +
Sbjct: 179 YPSVIAKIVK 188
>sp|P99162|PUR3_STAAN Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain N315) GN=purN PE=1 SV=1
Length = 188
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ LV L++ V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 DSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASAL 269
Y V + +
Sbjct: 179 YPSVIAKI 186
>sp|P65897|PUR3_STAAM Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=purN PE=1 SV=1
Length = 188
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYG-DVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
+A+F SG GSNF +I +G + +V L T+ + + A+ + IPV + +
Sbjct: 4 IAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQF 63
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+ LV L++ V++I+LAGY++LI +L+ ++ I+NIHPSLLP + G
Sbjct: 64 DSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAI 123
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G H SG +G T+H+VD DTG I+ QR + +D+ E L +V E+ L
Sbjct: 124 GQAYH-----SGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYEL 178
Query: 262 YVDVASAL 269
Y V + +
Sbjct: 179 YPSVIAKI 186
>sp|P71554|PUR3_MYCTU Phosphoribosylglycinamide formyltransferase OS=Mycobacterium
tuberculosis GN=purN PE=1 SV=2
Length = 215
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKD 141
L V SG GS RS+ A + Y VV V +C AE A + S+PV + D
Sbjct: 14 RLVVLASGTGSLLRSLLDAAVGD--YPARVVAVGVDRECRAAEIAAEASVPVFTV-RLAD 70
Query: 142 EPNGLSPN-DLVAALSEVNVDFILLAGYLKLI-PMELIRAYPRSIVNIHPSLLPAFGGKG 199
P+ + + + AA + D ++ AG+++++ P L R Y R++ N HP+LLPAF G
Sbjct: 71 HPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTL-NTHPALLPAF--PG 127
Query: 200 YYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEH 259
+G+ +A G + +G T+H VD DTG ILAQ+ VPVL D E L R+ + E
Sbjct: 128 THGVA---DALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTER 184
Query: 260 R 260
R
Sbjct: 185 R 185
>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
GN=purU PE=3 SV=1
Length = 310
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 67 GDKYEKD--FDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAE 124
DK+ D F K K +A+ S + G + VV+++ N PD A
Sbjct: 100 ADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDL--AA 157
Query: 125 YARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSI 184
+ R +P I P T+D L L NVD ++LA Y++++ + A +
Sbjct: 158 HVRPFGVPFIHIPATRDTRTEAEQRQL--QLLSGNVDLVVLARYMQILSPGFLEAIGCPL 215
Query: 185 VNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWN 244
+NIH S LPAF G Y + G + G T H+V E D G I+ Q VV V
Sbjct: 216 INIHHSFLPAFTGAAPYQRARER-----GVKLIGATAHYVTEVLDEGPIIEQDVVRVDHT 270
Query: 245 DTAEDLAARVLLEEHRLYVDVASALCEERVVW 276
T +DL R+ DV A+ V+W
Sbjct: 271 HTVDDLV--------RVGADVERAVLSRAVLW 294
>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
Length = 310
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 19/212 (8%)
Query: 67 GDKYEKD--FDSGIKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAE 124
DK+ D F K K +A+ S + G + VV+++ N PD A
Sbjct: 100 ADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIANHPDL--AA 157
Query: 125 YARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSI 184
+ R +P I P T+D L L NVD ++LA Y++++ + A +
Sbjct: 158 HVRPFGVPFIHIPATRDTRTEAEQRQL--QLLSGNVDLVVLARYMQILSPGFLEAIGCPL 215
Query: 185 VNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWN 244
+NIH S LPAF G Y + G + G T H+V E D G I+ Q VV V
Sbjct: 216 INIHHSFLPAFTGAAPYQRARER-----GVKLIGATAHYVTEVLDEGPIIEQDVVRVDHT 270
Query: 245 DTAEDLAARVLLEEHRLYVDVASALCEERVVW 276
T +DL R+ DV A+ V+W
Sbjct: 271 HTVDDLV--------RVGADVERAVLSRAVLW 294
>sp|Q54I60|PUR3_DICDI Phosphoribosylglycinamide formyltransferase OS=Dictyostelium
discoideum GN=purN PE=3 SV=1
Length = 206
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 28/203 (13%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK- 140
N+ V +SG G+N ++I A + + + V+++NK G E A+ SI +F K
Sbjct: 4 NICVLISGNGTNLQAIIDAIESKYLNVCIKVVISNKETAYGLERAKKASIETRVFSLQKY 63
Query: 141 ---DEPN------GLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS-----IVN 186
D N GL ++ S ++D I+LAG++ ++P ++ + + I+N
Sbjct: 64 LKQDPINNTRSTYGLELAKIIREYS--SIDLIVLAGWMIILPATFLKEFTDNKPTIDIIN 121
Query: 187 IHPSLLPAFGG-----KGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPV 241
+HP+L + G + + K +K ++SG IH V E D G ++ + +P+
Sbjct: 122 LHPALPGQYPGAHAIERAFNDFKENKI------KHSGIMIHKVIEEVDAGEVILTKEIPI 175
Query: 242 LWNDTAEDLAARVLLEEHRLYVD 264
L DT E L R +EH+ V+
Sbjct: 176 LPTDTLESLEERFHQQEHKSLVE 198
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 81 KNLAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTK 140
K +A+FVS + G++ ++ V+++N + E +IP K
Sbjct: 104 KRVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEE--ARELVERLNIPFHYMKANK 161
Query: 141 DEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
D + L L + +VD I+LA Y++++ + + A+P I+NIH S LPAF G
Sbjct: 162 DIRAEVEKKQL-ELLEQYDVDVIVLARYMQILTPDFVSAHPNRIINIHHSFLPAFIGANP 220
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
Y K G + G T H+V D G I+ Q + V D AE L
Sbjct: 221 Y-----KRAYERGVKLIGATSHYVTNDLDEGPIIEQDIERVDHRDNAEAL 265
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 83 LAVFVSGGGSNFRSIHAACLAGSVYGDVVVLVTNKPDCGGAEYARDNSIPVILFPKTKDE 142
LA++VS I +G + ++ ++++N PD A I P TK+
Sbjct: 91 LALWVSKQDHCLLDILWRWRSGELRCEIPLIISNHPDLKSI--ADQFGIDFHCLPITKEN 148
Query: 143 PNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYG 202
+L A L + +D ++LA YL+++ + + +P +I+NIH S LPAF G Y
Sbjct: 149 KLAQETAEL-ALLKQYQIDLVVLAKYLQILTTDFVVQFP-NIINIHHSFLPAFPGANPY- 205
Query: 203 MKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
H+A G + G T H+ D G I+ Q VV V D +DL
Sbjct: 206 ---HRAH-ERGVKIIGATAHYATAQLDEGPIIEQDVVRVSHRDNVDDL 249
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 145 GLSPND----LVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
GLS N+ + A+ D+++LA Y++++ E + +P I+NIH S LPAF G
Sbjct: 142 GLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARP 201
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
Y H+A G + G T H+V+++ D G I+ Q V+ V TAED+
Sbjct: 202 Y----HQAY-ERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDM 246
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 145 GLSPND----LVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
GLS N+ + A+ D+++LA Y++++ E + +P I+NIH S LPAF G
Sbjct: 142 GLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARP 201
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
Y H+A G + G T H+V+++ D G I+ Q V+ V TAED+
Sbjct: 202 Y----HQAY-ERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDM 246
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 145 GLSPND----LVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
GL+ N+ + A+ D+++LA Y++++ E + +P I+NIH S LPAF G
Sbjct: 142 GLTRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARP 201
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
Y H+A G + G T H+V+++ D G I+ Q V+ V TAED+
Sbjct: 202 Y----HQAY-ERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDM 246
>sp|O67890|FMT_AQUAE Methionyl-tRNA formyltransferase OS=Aquifex aeolicus (strain VF5)
GN=fmt PE=3 SV=1
Length = 303
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 149 NDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKA 208
+L+ + E+ D I++ Y K++P E++ P +N+H SLLP + G + +A
Sbjct: 66 KELIPLVEELKPDCIVVVAYGKILPKEVLDLPPYKTINLHASLLPKYRG----AAPIQRA 121
Query: 209 VIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDT----AEDLA---ARVLLEEHRL 261
++A G + +G T+ V+E D G ILAQ +P+ D +E LA A++L+ RL
Sbjct: 122 IMA-GEKETGNTVMLVNEEMDAGDILAQEKIPIEEEDNFLTLSEKLAKSGAKLLVNTLRL 180
Query: 262 YVD 264
+ +
Sbjct: 181 WFE 183
>sp|Q9UUK7|PUR3_SCHPO Phosphoribosylglycinamide formyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ade5 PE=2 SV=1
Length = 207
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 82 NLAVFVSGGGSNFRSIHAACLAGSVYGDVVV--LVTNKPDCGGAEYARDNSIPV---ILF 136
+L V +SG GSN ++I A L G + G+ V +++N+ + G E A IP L
Sbjct: 4 SLVVLISGSGSNLQAIIDATLNGVLKGEAAVTHVLSNRKNAYGLERAAKAGIPTSLHTLL 63
Query: 137 PKTKDEPNGLSPNDLVAALSE----VNVDFILLAGYLK------LIPMELIRAYPRSIVN 186
P K+ + A L+E + ++ AG++ LIP+E + I+N
Sbjct: 64 PYKKEYGPEIGRKKYDAELAEKIIKLQPSLVVCAGWMHILSPEVLIPLETNKI---GIIN 120
Query: 187 IHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDT 246
+HP+L AF G + + +A ++G +H+V D G+ + + VP+L D+
Sbjct: 121 LHPALPGAFNGI-HAIERAFEAAQQGKITHTGAMVHWVIAAVDEGKPIIVQEVPILSTDS 179
Query: 247 AEDLAARVLLEEHRLYVD 264
E L ++ EH + V
Sbjct: 180 IEALEEKIHAAEHVILVQ 197
>sp|Q03RS3|FMT_LACBA Methionyl-tRNA formyltransferase OS=Lactobacillus brevis (strain
ATCC 367 / JCM 1170) GN=fmt PE=3 SV=1
Length = 314
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P +S + +A E+ D I+ A + + +P +L++A + VN+H SLLP + G
Sbjct: 62 QPEKISGSSEMARAIELAPDLIVTAAFGQFLPTKLLKAAKVAAVNVHASLLPKYRG---- 117
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARV 254
G VH A++ +G +G +I F+++ D G +LAQR +P+ D + A++
Sbjct: 118 GAPVHYAIM-NGDSETGVSIMFMEKKMDAGAVLAQRAIPITDQDDVGTMFAKL 169
>sp|Q83AA8|FMT_COXBU Methionyl-tRNA formyltransferase OS=Coxiella burnetii (strain RSA
493 / Nine Mile phase I) GN=fmt PE=1 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS 183
E AR N IP+I +DE + L+A +N D +++ Y ++P + + A+
Sbjct: 52 EIARQNEIPIIQPFSLRDE---VEQEKLIA----MNADVMVVVAYGLILPKKALNAFRLG 104
Query: 184 IVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLW 243
VN+H SLLP + G + +A++A G R +G +I ++E DTG +LA+ +
Sbjct: 105 CVNVHASLLPRWRGAA----PIQRAILA-GDRETGISIMQMNEGLDTGDVLAKSACVISS 159
Query: 244 NDTAEDLAARVLL 256
DTA DL R+ L
Sbjct: 160 EDTAADLHDRLSL 172
>sp|A9N9H5|FMT_COXBR Methionyl-tRNA formyltransferase OS=Coxiella burnetii (strain RSA
331 / Henzerling II) GN=fmt PE=3 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS 183
E AR N IP+I +DE + L+A +N D +++ Y ++P + + A+
Sbjct: 52 EIARQNEIPIIQPFSLRDE---VEQEKLIA----MNADVMVVVAYGLILPKKALNAFRLG 104
Query: 184 IVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLW 243
VN+H SLLP + G + +A++A G R +G +I ++E DTG +LA+ +
Sbjct: 105 CVNVHASLLPRWRGAA----PIQRAILA-GDRETGISIMQMNEGLDTGDVLAKSACVISS 159
Query: 244 NDTAEDLAARVLL 256
DTA DL R+ L
Sbjct: 160 EDTAADLHDRLSL 172
>sp|A9KH14|FMT_COXBN Methionyl-tRNA formyltransferase OS=Coxiella burnetii (strain
Dugway 5J108-111) GN=fmt PE=3 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS 183
E AR N IP+I +DE + L+A +N D +++ Y ++P + + A+
Sbjct: 52 EIARQNEIPIIQPFSLRDE---VEQEKLIA----MNADVMVVVAYGLILPKKALNAFRLG 104
Query: 184 IVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLW 243
VN+H SLLP + G + +A++A G R +G +I ++E DTG +LA+ +
Sbjct: 105 CVNVHASLLPRWRGAA----PIQRAILA-GDRETGISIMQMNEGLDTGDVLAKSACVISS 159
Query: 244 NDTAEDLAARVLL 256
DTA DL R+ L
Sbjct: 160 EDTAADLHDRLSL 172
>sp|B6J3C2|FMT_COXB2 Methionyl-tRNA formyltransferase OS=Coxiella burnetii (strain
CbuG_Q212) GN=fmt PE=3 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS 183
E AR N IP+I +DE + L+A +N D +++ Y ++P + + A+
Sbjct: 52 EIARQNEIPIIQPFSLRDE---VEQEKLIA----MNADVMVVVAYGLILPKKALNAFRLG 104
Query: 184 IVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLW 243
VN+H SLLP + G + +A++A G R +G +I ++E DTG +LA+ +
Sbjct: 105 CVNVHASLLPRWRGAA----PIQRAILA-GDRETGISIMQMNEGLDTGDVLAKSACVISS 159
Query: 244 NDTAEDLAARVLL 256
DTA DL R+ L
Sbjct: 160 EDTAADLHDRLSL 172
>sp|B6J655|FMT_COXB1 Methionyl-tRNA formyltransferase OS=Coxiella burnetii (strain
CbuK_Q154) GN=fmt PE=3 SV=1
Length = 314
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 124 EYARDNSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRS 183
E AR N IP+I +DE + L+A +N D +++ Y ++P + + A+
Sbjct: 52 EIARQNEIPIIQPFSLRDE---VEQEKLIA----MNADVMVVVAYGLILPKKALNAFRLG 104
Query: 184 IVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLW 243
VN+H SLLP + G + +A++A G R +G +I ++E DTG +LA+ +
Sbjct: 105 CVNVHASLLPRWRGAA----PIQRAILA-GDRETGISIMQMNEGLDTGDMLAKSACVISS 159
Query: 244 NDTAEDLAARVLL 256
DTA DL R+ L
Sbjct: 160 EDTAADLHDRLSL 172
>sp|Q74IM9|FMT_LACJO Methionyl-tRNA formyltransferase OS=Lactobacillus johnsonii (strain
CNCM I-12250 / La1 / NCC 533) GN=fmt PE=3 SV=1
Length = 314
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P LS ++ +A L ++ DFI+ A Y + +P + +++ + VN+H SLLP + G
Sbjct: 62 QPAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRG---- 117
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAAR-------V 254
G + +V+ +G + +G TI + + D G I AQ+ +P+ DT+ L + +
Sbjct: 118 GAPIQYSVL-NGDKETGVTIMEMVKKMDAGDIFAQKALPITDEDTSGTLFDKLSILGRDL 176
Query: 255 LLEEHRLYVD---VASALCEERVVW 276
LLE ++D +A E++VV+
Sbjct: 177 LLETLPKFIDGTVTRTAQDEDKVVF 201
>sp|Q64PD6|FMT_BACFR Methionyl-tRNA formyltransferase OS=Bacteroides fragilis (strain
YCH46) GN=fmt PE=3 SV=1
Length = 324
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDV-VVLVTNKPDCGG--------AEYARD 128
+KK++L + V G +F CL Y V V+ + +KP G +YA D
Sbjct: 1 MKKEDLRI-VYMGTPDFAVEALQCLVEGGYNVVGVITMPDKPAGRGHKIQYSPVKQYALD 59
Query: 129 NSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPR-SIVNI 187
+ +P++ K KDE + + AL E D ++ + +++P E++ PR N+
Sbjct: 60 HQLPLLQPEKLKDE-------EFIQALREWKADLQIVVAF-RMLP-EVVWNMPRLGTFNL 110
Query: 188 HPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTA 247
H SLLP + G ++ AVI +G +G T F+ DTG ++ Q +P+ D
Sbjct: 111 HASLLPQYRGAA----PINWAVI-NGDTETGITTFFLKHEIDTGEVIQQVRIPIADTDNV 165
Query: 248 EDLAARVLLEEHRLYVDVASALCEERV 274
E + +++ RL ++ A+ E +V
Sbjct: 166 EIVHDKLMHLGGRLVIETVDAILEGKV 192
>sp|Q5L975|FMT_BACFN Methionyl-tRNA formyltransferase OS=Bacteroides fragilis (strain
ATCC 25285 / NCTC 9343) GN=fmt PE=3 SV=1
Length = 324
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 78 IKKKNLAVFVSGGGSNFRSIHAACLAGSVYGDV-VVLVTNKPDCGG--------AEYARD 128
+KK++L + V G +F CL Y V V+ + +KP G +YA D
Sbjct: 1 MKKEDLRI-VYMGTPDFAVEALQCLVEGGYNVVGVITMPDKPAGRGHKIQYSPVKQYALD 59
Query: 129 NSIPVILFPKTKDEPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPR-SIVNI 187
+ +P++ K KDE + + AL E D ++ + +++P E++ PR N+
Sbjct: 60 HQLPLLQPEKLKDE-------EFIQALREWKADLQIVVAF-RMLP-EVVWNMPRLGTFNL 110
Query: 188 HPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTA 247
H SLLP + G ++ AVI +G +G T F+ DTG ++ Q +P+ D
Sbjct: 111 HASLLPQYRGAA----PINWAVI-NGDTETGITTFFLKHEIDTGEVIQQVRIPIADTDNV 165
Query: 248 EDLAARVLLEEHRLYVDVASALCEERV 274
E + +++ RL ++ A+ E +V
Sbjct: 166 EIVHDKLMHLGGRLVIETVDAILEGKV 192
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 151 LVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVI 210
L + E D+I+LA Y++++ E + YP ++NIH S LPAF G K ++
Sbjct: 150 LAEKIDEYTPDYIVLAKYMRVLNPEFVARYPNRVINIHHSFLPAF-----IGAKPYQQAY 204
Query: 211 ASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAE 248
G + G T HF++ D G I+ Q V+ V AE
Sbjct: 205 KRGVKIIGATAHFINNELDQGPIIMQNVINVDHTYNAE 242
>sp|B1HQE4|FMT_LYSSC Methionyl-tRNA formyltransferase OS=Lysinibacillus sphaericus
(strain C3-41) GN=fmt PE=3 SV=1
Length = 313
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P L ++ + + + D ++ A + +++P EL+ A +N+H SLLP + G
Sbjct: 62 QPEKLRGSEELQQILSLQPDIVITAAFGQILPKELLDAPSLGCINVHASLLPKYRG---- 117
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWND 245
G +H+A+I G + +G TI ++ E D G I++QR +P+ +D
Sbjct: 118 GAPIHQAII-DGEKETGVTIMYMAEKLDAGDIISQRAIPIELDD 160
>sp|B9DPM5|FMT_STACT Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=fmt PE=3 SV=1
Length = 310
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P +S +D + L ++ D I+ A + +++P L+ A +N+H SLLP + G
Sbjct: 61 QPEKISQSDDLQTLIDMEPDLIVTAAFGQILPKSLLDAPKLGAINVHASLLPKYRG---- 116
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDL 250
G +H+A+I G + +G TI ++ D G I++Q+ + + ND E +
Sbjct: 117 GAPIHQAII-DGEKETGVTIMYMAPKLDAGDIISQQAIEIEANDNVESM 164
>sp|B5YIL6|FMT_THEYD Methionyl-tRNA formyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=fmt PE=3 SV=1
Length = 308
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P + ++ + L +N +F ++ Y K++P E++ +N+H SLLP Y
Sbjct: 63 QPEKMKDDNFIKKLKSLNPEFAIVVAYGKILPKEILEIPKHGCINLHASLLPK-----YR 117
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRL 261
G + + +G + +G T +DE DTG IL Q+ + + D AE L+ ++ + L
Sbjct: 118 GAAPIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAETLSEKLSVVGAEL 177
Query: 262 YVDVASAL 269
++ +
Sbjct: 178 IIETIDKM 185
>sp|Q1IIS2|FMT_KORVE Methionyl-tRNA formyltransferase OS=Koribacter versatilis (strain
Ellin345) GN=fmt PE=3 SV=1
Length = 312
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 153 AALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIAS 212
A LS + D I++ GY ++IP +I P +N+H SLLP Y G + IA
Sbjct: 73 AQLSAIAPDAIIVVGYGRIIPQWMIDLPPLGNINVHASLLPK-----YRGAAPIQWAIAM 127
Query: 213 GARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAARV 254
G +G T +D DTG +L Q +P+ DT+E LA R+
Sbjct: 128 GEAVTGVTTMKIDAGLDTGDMLLQAEMPIAPEDTSESLAPRL 169
>sp|Q3AC19|FMT_CARHZ Methionyl-tRNA formyltransferase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=fmt PE=3
SV=1
Length = 308
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 19/177 (10%)
Query: 111 VVLVTNKPDCGGAEYARDNSIPVILFPKTKDEPNGLSP----NDLVAALSEVNVDFILLA 166
V LV KPD + S PV LF + ++ ++P ++ + V + I++A
Sbjct: 25 VALVVTKPDAAAGRGKKVISSPVKLFAQ-ENHLRVITPLKFNEEVYQEILAVKPEVIVVA 83
Query: 167 GYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYYGMKVHKAVIASGARYSGPTIHFVDE 226
Y KL+P E++ P +NIH SLLP Y G + + +G + +G TI F+DE
Sbjct: 84 AYGKLLPREILNIPPYGCLNIHASLLPF-----YRGAAPIERCLMAGEKETGITIMFMDE 138
Query: 227 HYDTGRILAQRVVPVLWNDTAEDLAARVLLEEHRLYVDVASALCEERVV-WREDGVP 282
DTG I Q V + T +L ++ ++ + L E + RE G+P
Sbjct: 139 GLDTGDIALQEKVAINQEITGGEL--------RKILAEIGADLIIEALKRLREGGLP 187
>sp|A4XL81|FMT_CALS8 Methionyl-tRNA formyltransferase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=fmt
PE=3 SV=1
Length = 311
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 142 EPNGLSPND-LVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGY 200
+P+ L N+ L ++N + I++ Y K++P E+++ +N+H SLLP Y
Sbjct: 62 QPDRLKGNEEFFEVLKKINPEVIVVVAYGKILPKEILQIPKYGCINVHASLLPE-----Y 116
Query: 201 YGMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTA-------EDLAAR 253
G + V+ G Y+G TI +DE DTG IL Q + + ND +L A+
Sbjct: 117 RGAAPIQRVLMDGKNYTGITIMKMDEGLDTGDILLQEGIEIEQNDDVITLSKKLSELGAK 176
Query: 254 VLLE 257
+L+E
Sbjct: 177 LLIE 180
>sp|Q044H0|FMT_LACGA Methionyl-tRNA formyltransferase OS=Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243) GN=fmt PE=3 SV=1
Length = 314
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 15/145 (10%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P LS +D +A L ++ DFI+ A Y + +P + +++ + VN+H SLLP + G
Sbjct: 62 QPAKLSGSDELAELMKIEPDFIVTAAYGQFLPTKFLKSAKIAPVNVHGSLLPKYRG---- 117
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWNDTAEDLAAR-------V 254
G + +V+ +G + +G TI + + D G I +Q+ +P+ +DT+ L + +
Sbjct: 118 GAPIQYSVL-NGDKETGVTIMEMVKKMDAGDIFSQKALPIEDDDTSGTLFDKLSILGRDL 176
Query: 255 LLEEHRLYVD---VASALCEERVVW 276
LLE ++D + E++VV+
Sbjct: 177 LLETLPKFIDGTVTRTPQNEDKVVF 201
>sp|Q6GHL9|FMT_STAAR Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=fmt PE=3 SV=1
Length = 311
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 142 EPNGLSPNDLVAALSEVNVDFILLAGYLKLIPMELIRAYPRSIVNIHPSLLPAFGGKGYY 201
+P LS ++ + L +++VD I+ A + +L+P L+ +N+H SLLP + G
Sbjct: 61 QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRG---- 116
Query: 202 GMKVHKAVIASGARYSGPTIHFVDEHYDTGRILAQRVVPVLWND 245
G +H+A+I G + +G TI ++ + D G I++Q+ + + ND
Sbjct: 117 GAPIHQAII-DGEQETGITIMYMVKKLDAGNIISQQAIKIEEND 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,291,339
Number of Sequences: 539616
Number of extensions: 5162267
Number of successful extensions: 12374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 364
Number of HSP's that attempted gapping in prelim test: 11208
Number of HSP's gapped (non-prelim): 887
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)