BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022637
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 44 PISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNM 103
P+S + + + F + + + + IT +R L PG+W++ ++I +Y
Sbjct: 271 PLSREEETAVRRAFSANDSNILVTHKNSNIDITGKILRCLKPGKWLNDEVINLYMVLLKE 330
Query: 104 KEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRD--RYMSRLDTCEKIYVPINS 161
+EA + +C F T++ + + N+ + R L C+KI++PI+
Sbjct: 331 REAREPKKFLKCHFFNTFFFTKLVNSATGYNYGAVRRWTSMKRLGYHLKDCDKIFIPIHM 390
Query: 162 DGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTF 221
+ HW + V++I DS + RE I ++LA + + E
Sbjct: 391 NIHWTLAVINIKDQKFQYLDSFKG---REPKILDALARYFVDEVRDKSEVD--------- 438
Query: 222 LNFQICRQA---GLPQQPNGFDCGYYVMKYMD 250
L+ RQ LP Q NGFDCG +++KY+D
Sbjct: 439 LDVSRWRQEFVQDLPMQRNGFDCGMFMVKYID 470
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 17 IQHSRDKNVISKSCRLRFSVGPFTIPSPISEDAKQLILYLFDDKLNTMEIVVDIGDN-SI 75
++ SR K V R+ PF P++ED + + F + + N I
Sbjct: 237 LRQSRPKTV---EKRVEVPREPFI---PLTEDEEAEVYRAFSGRNRRKVLATHENSNIDI 290
Query: 76 TRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNF 135
T ++ L P W++ ++I +Y + +E + +C + T++ + ++D S NF
Sbjct: 291 TGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKLVSD-SGYNF 349
Query: 136 AQAAGF--RDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMI 193
+ + + L C+ I+VPI+ HW + V++ + DSL
Sbjct: 350 KAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAVINNRESKLLYLDSLNGVD------ 403
Query: 194 NESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYMD 250
IL +L + EA + ++ + LPQQ NG+DCG +++KY+D
Sbjct: 404 ---PMILNALAKYMGDEANEKSGKKIDANSWDMEFVEDLPQQKNGYDCGMFMLKYID 457
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 31/176 (17%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 134
IT +TL P W++ II + MK EK ++P +++ +++L+
Sbjct: 435 ITVRDFKTLAPRRWLNDTIIEFF-----MKYIEK--STPNTVAFNSFF-------YTNLS 480
Query: 135 FAQAAGFRDRYMSR----LDTCEKIYVPIN-SDGHWYMLVVDISHATATIWDSLESPSRR 189
G R R+M R +D +KI+ PIN + HW + ++D+ T DSL +
Sbjct: 481 ERGYQGVR-RWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNA 539
Query: 190 EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYV 245
S AIL L + +E++ F ++ C PQQPNG+DCG YV
Sbjct: 540 M-----SFAILTDLQKYVMEESKHTIGEDFDLIHLD-C-----PQQPNGYDCGIYV 584
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 34 FSVGPFTIPSPISEDAKQLILYLFDDKLNTMEIVVDIGDNSI--TRSSMRTLLPGEWIDG 91
F PF P++E+ L+ K N +I+V +++I + +++ L P +W++
Sbjct: 102 FCGEPF---QPLNEEEVALVNSALS-KRNRKKILVSHKNSNIDISGETLQCLRPNQWLND 157
Query: 92 DIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLDT 151
D+ +Y + ++ +C F T++ L S N+ + + + D
Sbjct: 158 DVTNLYLELLKERQTRDPQKYFKCHFFNTFF-YVKLVSGSGYNYKAVSRWTTKRKLGYDL 216
Query: 152 --CEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQ 209
C+ I+VPI+ D HW + V++ DSL IL ++ L
Sbjct: 217 IDCDIIFVPIHIDIHWTLGVINNRERKFVYLDSL--------FTGVGHTILNAMAKYLVD 268
Query: 210 EARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYMD 250
E + ++ + PQQ NG+DCG +++KY+D
Sbjct: 269 EVKQKSQKNIDVSSWGMEYVEERPQQQNGYDCGMFMLKYID 309
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 45 ISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMK 104
I+E+ ++ I +F + N E++ + +ITR ++TL W++ +II Y + +
Sbjct: 419 ITEEMEKEIKNVFRNG-NQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMER 477
Query: 105 EAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSD 162
EK S F ++++ A + ++ R+ ++D + + + VPI+
Sbjct: 478 SKEKGFPSVHA-FNTFFFTKLKTAGYQAVK---------RWTKKVDVFSVDILLVPIHLG 527
Query: 163 GHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFL 222
HW + VVD + T +DS+ + NE+ IL L+QE+ +F
Sbjct: 528 VHWCLAVVDFRRKSITYYDSMGG------INNEACRILLQY---LKQESVDKKRKEFDTN 578
Query: 223 NFQICRQAG--LPQQPNGFDCGYYVMKYMDSPCIV 255
+Q+ + +PQQ NG DCG + KY D CI
Sbjct: 579 GWQLFSKKSQEIPQQMNGSDCGMFACKYAD--CIT 611
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 45 ISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMK 104
I+E+ ++ I +F + N E++ + +ITR ++TL W++ +II Y + +
Sbjct: 423 ITEEMEKEIKNVFRNG-NQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMER 481
Query: 105 EAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSD 162
EK + S F ++++ A + ++ R+ ++D + + + VPI+
Sbjct: 482 SKEKGLPSVHA-FNTFFFTKLKTAGYQAVK---------RWTKKVDVFSVDILLVPIHLG 531
Query: 163 GHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFL 222
HW + VVD T +DS+ + NE+ IL L+QE+ +F
Sbjct: 532 VHWCLAVVDFRKKNITYYDSMGG------INNEACRILLQY---LKQESIDKKRKEFDTN 582
Query: 223 NFQICRQAG--LPQQPNGFDCGYYVMKYMDSPCIV 255
+Q+ + +PQQ NG DCG + KY D CI
Sbjct: 583 GWQLFSKKSQEIPQQMNGSDCGMFACKYAD--CIT 615
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 45 ISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMK 104
I+E+ ++ I +F + N E++ + +ITR ++TL W++ +II Y + +
Sbjct: 424 ITEEMEKEIKNVFRNG-NQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMER 482
Query: 105 EAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSD 162
EK + S F ++++ A + ++ R+ ++D + + + VPI+
Sbjct: 483 SKEKGLPSVHA-FNTFFFTKLKTAGYQAVK---------RWTKKVDVFSVDILLVPIHLG 532
Query: 163 GHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFL 222
HW + VVD T +DS+ + NE+ IL L+QE+ +F
Sbjct: 533 VHWCLAVVDFRKKNITYYDSMGG------INNEACRILLQY---LKQESIDKKRKEFDTN 583
Query: 223 NFQICRQAG--LPQQPNGFDCGYYVMKYMDSPCIV 255
+Q+ + +PQQ NG DCG + KY D CI
Sbjct: 584 GWQLFSKKSQEIPQQMNGSDCGMFACKYAD--CIT 616
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 129
ITR ++TL W++ ++I Y + +N K+ + +F P S A+
Sbjct: 397 ITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKSGGYQAVKR 456
Query: 130 WS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSR 188
W+ +N + E I VPI+ HW ++V+D+ DS+
Sbjct: 457 WTKGVNLFEQ--------------EIILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKGH 502
Query: 189 REKMINESLAILASLDFVLRQEARALFCNQFTFLNF--QICRQAGLPQQPNGFDCGYYVM 246
R I L L+ E++ + L + + +PQQ NG DCG +
Sbjct: 503 R---------ICEILLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDCGMFTC 553
Query: 247 KYMD 250
KY D
Sbjct: 554 KYAD 557
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 54/249 (21%)
Query: 25 VISKSCRLRFSVGPFTIPSPISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLL 84
V+ ++C L P + ED I Y D+ + ++V ++ ++ L
Sbjct: 302 VVEEACEL---------PEGLPED----IYYPSSDQSDGRDLV------QVSLKDLKCLS 342
Query: 85 PGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQA---ALADWSSLNFAQAAGF 141
PGE++ +I Y Y D T+ C F T++ + A++ + A F
Sbjct: 343 PGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNTFFYKKLTEAVSYKGNDRDAYFVKF 402
Query: 142 RDRYMSRLDT-CEK-IYVPINSDGHWYMLVV------DISHATATIWDSLESPSRREKMI 193
R R+ D C+ I++PI+ D HW ++++ D S T DSL R
Sbjct: 403 R-RWWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGLTIIHLDSLGLHPRN---- 457
Query: 194 NESLAILASLDFVLRQEARALFCNQFTFLNFQIC-------------RQAGLPQQPNGFD 240
I ++ LR+E + NQ L+ I + +PQQ N FD
Sbjct: 458 ----LIFNNVKRFLREEWN--YLNQDAPLDLPISAKVWRDLPNMINEAEVQVPQQKNDFD 511
Query: 241 CGYYVMKYM 249
CG +++ ++
Sbjct: 512 CGLFLLFFI 520
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 30/194 (15%)
Query: 62 NTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMY----ADYKNMKEAEKDVTSPRCWF 117
N E VD I + + TL W++ +II Y D N D P+ +
Sbjct: 490 NPNEQFVDAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSN-----GDSKYPKIYA 544
Query: 118 LPTY-YSQAALADWSSLNFAQAAGFRDRYMSRLD--TCEKIYVPINSDGHWYMLVVDISH 174
T+ YS ++S+ R+ ++D + + VP++ HW M V+D+
Sbjct: 545 FNTFFYSNIVSKGYASVK---------RWTRKVDIFAFDIVLVPVHLGMHWCMAVIDMGE 595
Query: 175 ATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQ 234
+DSL + + A+L +L L E+ F + I + +P+
Sbjct: 596 KKIEFYDSL---------YDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQMTDIPR 646
Query: 235 QPNGFDCGYYVMKY 248
Q NG DCG + ++
Sbjct: 647 QQNGSDCGVFSCQF 660
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 33/185 (17%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 129
ITR ++TL W++ ++I Y + +N K+ + +F P S A+
Sbjct: 397 ITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKSGGYQAVKR 456
Query: 130 WS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSR 188
W+ +N + E I VPI+ HW ++V+D+ DS+
Sbjct: 457 WTKGVNLFEQ--------------EIILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKGH 502
Query: 189 REKMINESLAILASLDFVLRQEA---RALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYV 245
R I L L+ E+ R + N + ++ + + +PQQ NG DCG +
Sbjct: 503 R---------ICEILLQYLQDESKTKRNIDLNLLEWTHYSM-KPHEIPQQLNGSDCGMFT 552
Query: 246 MKYMD 250
KY D
Sbjct: 553 CKYAD 557
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 66 IVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADY-KNMKEAEKDVTSPRCWFLPTYYSQ 124
++V D++I +S + L +W++ II+ Y ++ K+ E K+ + L S
Sbjct: 5 LIVSYNDSAIYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLL----SP 60
Query: 125 AALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSD---------GHWYMLVVDISHA 175
+ + S + Q L T E I+ P+ ++ HW +L+ S
Sbjct: 61 SVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFIKSLN 120
Query: 176 TATIWDSLESPSRREKMINESLAILASLDFVL-----RQEARALFCNQFTFLNFQICRQA 230
+DS+ S + ++++ I++ F+L + + NQ T
Sbjct: 121 KFIYYDSINSFNS-----SDAIFIISKFKFLLSSPPPKTNLKEFLINQKT---------- 165
Query: 231 GLPQQPNGFDCGYYVMKYMD 250
PQQ NG+DCG YV+ ++
Sbjct: 166 --PQQQNGYDCGLYVLSIIE 183
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 29/204 (14%)
Query: 50 KQLILYLF-DDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEK 108
K+ + YL + +++ E ++ + IT + TL +W++ ++I Y + + E K
Sbjct: 353 KRALKYLNQSNSVSSSEPIITKFNIPITLKDLHTLRNRQWLNDEVINFYMNL--ISERSK 410
Query: 109 -DVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFR---DRYMSRLDTCEKIYVPINSDGH 164
D + PR T++ ++SL AG R + + + +++P++ D H
Sbjct: 411 IDSSLPRVHGFNTFF-------YTSLQRRGYAGVRRWAKKARVNIADMDAVFIPVHLDVH 463
Query: 165 WYMLVVDISHATATIWDSLE-SPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLN 223
W M V++ S WDSL SP + ++ D+ + + A+ + + N
Sbjct: 464 WCMAVINKSKKRFEYWDSLAGSPGKVFDLLR---------DYYIAETKGAVDVSDWE--N 512
Query: 224 FQICRQAGLPQQPNGFDCGYYVMK 247
F P+Q NG DCG + K
Sbjct: 513 FM---DDNSPRQRNGHDCGVFACK 533
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 29/183 (15%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 129
ITR ++TL W++ ++I Y + ++ K+ + + +F P S A+
Sbjct: 396 ITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHALSTFFYPKLKSGGYQAVKR 455
Query: 130 WSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRR 189
W+ + D+ E + VPI+ HW ++V+D+ DS+ R
Sbjct: 456 WT-----KGVNLFDQ--------ELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGHR 502
Query: 190 EKMINESLAILASLDFVLRQEARALFCNQFTFLNFQ--ICRQAGLPQQPNGFDCGYYVMK 247
I L L+ E++ L + + +PQQ NG DCG + K
Sbjct: 503 ---------ICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTCK 553
Query: 248 YMD 250
Y D
Sbjct: 554 YAD 556
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQA--ALAD 129
ITR ++TL W++ ++I Y + ++ K+ + + +F P S A+
Sbjct: 396 ITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHAFSTFFYPKLKSGGYQAVKR 455
Query: 130 WS-SLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSR 188
W+ +N + E + VPI+ HW ++V+D+ DS+
Sbjct: 456 WTKGVNLFEQ--------------ELVLVPIHRKVHWSLVVMDLRKKCLKYLDSMGQKGH 501
Query: 189 REKMINESLAILASLDFVLRQEARALFCNQFTFLNFQ--ICRQAGLPQQPNGFDCGYYVM 246
R I L L+ E++ L + + +PQQ NG DCG +
Sbjct: 502 R---------ICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPHEIPQQLNGSDCGMFTC 552
Query: 247 KYMD 250
KY D
Sbjct: 553 KYAD 556
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 41/225 (18%)
Query: 74 SITRSSMRTLLPGEWIDGDIITMYADY-KNMKEAEKDVTSPRCWFLPTYYSQAALADWSS 132
SI + + L P +++ II Y +Y KN + E+ D SS
Sbjct: 395 SICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKLADLDKDPSS 454
Query: 133 LNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRR 189
+ +AA R R +R +D K I+VP+N + HW ++V+ A D S++
Sbjct: 455 IADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKK 514
Query: 190 EKMINESLAILASLDFVLRQEARALFCNQFT-------------FLNFQICRQAGLPQQP 236
I +I S L+ + C ++ F+N + LPQQ
Sbjct: 515 VPCILHMDSIKGS-HAGLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFV-SLELPQQE 572
Query: 237 NGFDCGYYVMKYMDSPCIVVHDSYQHDSDHARLLLALYLVQSPLN 281
N FDCG +++ Y L L+L ++PLN
Sbjct: 573 NSFDCGLFLLHY----------------------LELFLAEAPLN 595
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 144 RYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMIN------- 194
++ +D EK I++PIN HW +++ I H + +E+P R +++
Sbjct: 378 KWTKNVDLFEKDYIFIPINCSFHWSLVI--ICHPGELVPSHVENPQRVPCILHLDSIKGS 435
Query: 195 ESLAILASLDFVLRQEARALFCNQFTFLNFQICRQA---GLPQQPNGFDCGYYVMKYMD 250
++ LR+E +A N + Q+ LPQQ N FDCG +++ Y+D
Sbjct: 436 HKGGLINIFPSYLREEWKARHENTTNDSSRAPNMQSISLELPQQENSFDCGLFLLHYLD 494
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 80 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 139
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 574 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 619
Query: 140 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 197
R+ ++D +K + +PI+ + HW ++ V +S+ + +DS + I+
Sbjct: 620 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDS--------QGIHFKF 671
Query: 198 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 256
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 672 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 726
Query: 257 HDSYQ 261
+Q
Sbjct: 727 EQPFQ 731
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 35/213 (16%)
Query: 71 GDNSI--TRSSMRTLLPGEWIDGDIITMYADYK--NMKEAEKDVTSPRCWFLPTYYSQAA 126
G NSI T + + L GE+++ I+ Y Y ++ + + F +Y++
Sbjct: 343 GTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLT 402
Query: 127 LADWSSLNFAQAAGFRDRYMSRLDTCEKIY--VPINSDGHWYMLVV-----------DIS 173
D G R ++ ++D K Y VPIN HWY+ ++ +
Sbjct: 403 SKDKDGKRLGHR-GVR-KWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLE 460
Query: 174 HATATIWDSLESPS----RREKMINESLAIL----------ASLDFVLRQEARALFCNQF 219
+ S+E PS R+ ++ + S AIL +L+++ F +
Sbjct: 461 EQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAFERKN 520
Query: 220 TFLNFQICR--QAGLPQQPNGFDCGYYVMKYMD 250
L R A +PQQ N DCG Y + +++
Sbjct: 521 VHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVE 553
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 80 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 139
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 574 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 619
Query: 140 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 197
R+ ++D +K + +PI+ + HW ++ V +S+ + +DS + I+
Sbjct: 620 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDS--------QGIHFKF 671
Query: 198 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 256
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 672 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 726
Query: 257 HDSYQ 261
+Q
Sbjct: 727 EQPFQ 731
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 34/194 (17%)
Query: 80 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 139
+ L P E++ ++ Y + + + + S C F TY+ + L+D +
Sbjct: 350 LECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFYKK-LSDAVTYKGNDKD 408
Query: 140 GFR---DRYMSRLDTCEK--IYVPINSDGHWYMLVV------DISHATATIWDSLESPSR 188
F R+ +D K I++PI+ D HW +++V D S T DSL SR
Sbjct: 409 AFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGLTILHLDSLGLHSR 468
Query: 189 REKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQA-------------GLPQQ 235
+ +I+ ++ L+ E L + ++ L+ I + +PQQ
Sbjct: 469 K--------SIVENVKRFLKDEWNYLNQDDYS-LDLPISEKVWKNLPRRISEAVVQVPQQ 519
Query: 236 PNGFDCGYYVMKYM 249
N FDCG +V+ ++
Sbjct: 520 KNDFDCGPFVLFFI 533
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 80 MRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAA 139
+ TL W++ +I MY E D + F +++ + + +
Sbjct: 568 LATLDGQNWLNDQVINMYG------ELIMDAVPDKVHFFNSFFHRQLVT--------KGY 613
Query: 140 GFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESL 197
R+ ++D +K + +PI+ + HW ++ V +S + +DS + I+
Sbjct: 614 NGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSSRIISFYDS--------QGIHFKF 665
Query: 198 AILASLDFVLRQEARALFCNQFTFL-NFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVV 256
+ ++L EAR N+ FL +Q +PQQ N DCG +V++Y C+ +
Sbjct: 666 CVENIRKYLL-TEAREK--NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCK--CLAL 720
Query: 257 HDSYQ 261
+Q
Sbjct: 721 EQPFQ 725
>sp|C4PLJ4|CDUB2_CHLTZ Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar B (strain TZ1A828/OT) GN=cdu2 PE=3 SV=1
Length = 339
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 219
+ HW +++VDI H T +DS + + + E L + ASL + +E A +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGADSDQEE 259
Query: 220 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 274
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 275 L 275
+
Sbjct: 320 I 320
>sp|Q3KKG9|CDUB2_CHLTA Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar A (strain HAR-13 / ATCC VR-571B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 219
+ HW +++VDI H T +DS + + + E L + ASL + +E A +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGADSDQEE 259
Query: 220 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 274
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 275 L 275
+
Sbjct: 320 I 320
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 68/247 (27%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 124
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 745 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKEN 804
Query: 125 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV----------- 170
D L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 805 NLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYE 864
Query: 171 -----------------------DISHATATIWDSLESPSRRE-------KMINES-LAI 199
+ H T+T++ S E E KM + I
Sbjct: 865 DFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKKMCKRPCILI 924
Query: 200 LASLDFV--------LRQ------EARALFCNQFTFLNF-QICRQAGLPQQPNGFDCGYY 244
L SL LR+ E + +F+ N +C + +P+Q N DCG Y
Sbjct: 925 LDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPK--VPKQDNSSDCGVY 982
Query: 245 VMKYMDS 251
+++Y++S
Sbjct: 983 LLQYVES 989
>sp|D3UTF3|CDUB2_CHLTS Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar E (strain Sweden2) GN=cdu2 PE=3 SV=1
Length = 339
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 161 SDGHWYMLVVDISHATATIWDS----LESPSR-REKMINESLAILASLDFVLRQEARALF 215
+ HW +++VDI H T +DS + SP + RE++ E LA ASL + +E A
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYDYIASPQQMREQL--EGLA--ASLGAIYPKEGGADS 255
Query: 216 CNQFTFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLL 270
+ FQ+ + + Q P F CG + + Y+++P + + + R L
Sbjct: 256 DQEELLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRAL 315
Query: 271 LALYL 275
LA ++
Sbjct: 316 LADFI 320
>sp|O84875|CDUB2_CHLTR Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=cdu2 PE=1 SV=1
Length = 339
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 161 SDGHWYMLVVDISHATATIWDS----LESPSR-REKMINESLAILASLDFVLRQEARALF 215
+ HW +++VDI H T +DS + SP + RE++ E LA ASL + +E A
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYDYIASPQQMREQL--EGLA--ASLGAIYPKEGGADS 255
Query: 216 CNQFTFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLL 270
+ FQ+ + + Q P F CG + + Y+++P + + + R L
Sbjct: 256 DQEELLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRAL 315
Query: 271 LALYL 275
LA ++
Sbjct: 316 LADFI 320
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 124
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 755 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKEN 814
Query: 125 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV 170
D +L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 815 NLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVI 863
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 124
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 758 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKEN 817
Query: 125 AALADWSSLNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVV 170
D +L+ AQ R R +R ++ K I+VP+N HWY+ V+
Sbjct: 818 NLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVI 866
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 134
+T + TL W++ ++ MY D D + F +++ + L
Sbjct: 388 LTMDDLGTLYGQNWLNDQVMNMYGDLV------MDTVPEKVHFFNSFF-------YDKLR 434
Query: 135 FAQAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRR-EK 191
G + R+ +D K + +PI+ + HW ++ VD+ T T +DS + +RR K
Sbjct: 435 TKGYDGVK-RWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPK 493
Query: 192 MINESLAILA----SLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMK 247
I + L A LDF Q + F + RQ N DCG +V++
Sbjct: 494 HIAKYLQAEAVKKDRLDF--HQGWKGYF-------KMNVARQN------NDSDCGAFVLQ 538
Query: 248 Y 248
Y
Sbjct: 539 Y 539
>sp|C4PQQ9|CDUB2_CHLTJ Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar B (strain Jali20/OT) GN=cdu2 PE=3 SV=1
Length = 339
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESL-AILASLDFVLRQEARALFCNQF 219
+ HW +++VDI H T +DS + + + E L + ASL + +E + +
Sbjct: 200 GNSHWVLVIVDIEHRCVTFFDSFYNYIASPQQMREQLEGLAASLGAIYPKEGGSDSDQEE 259
Query: 220 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 274
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 275 L 275
+
Sbjct: 320 I 320
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 36/181 (19%)
Query: 75 ITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLN 134
+T + TL W++ ++ MY D D + F +++ + L
Sbjct: 382 LTMDDLGTLYGQNWLNDQVMNMYGDLV------MDTVPEKVHFFNSFF-------YDKLR 428
Query: 135 FAQAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVVDISHATATIWDSLESPSRR-EK 191
G + R+ +D K + +PI+ + HW ++ VD+ T T +DS + +RR K
Sbjct: 429 TKGYDGVK-RWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYFDSQRTLNRRCPK 487
Query: 192 MINESLAILA----SLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMK 247
I + L A LDF Q + F + RQ N DCG +V++
Sbjct: 488 HIAKYLQAEAVKKDRLDF--HQGWKGYF-------KMNVARQN------NDSDCGAFVLQ 532
Query: 248 Y 248
Y
Sbjct: 533 Y 533
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 90/247 (36%), Gaps = 68/247 (27%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY------SQ 124
G +T + L GE+++ II Y Y +++A ++ F +Y
Sbjct: 745 GGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKEN 804
Query: 125 AALADWSSLNFAQAAGFRDRYMSR---LDTCEKIYVPINSDGHWYMLVV----------- 170
D L+ AQ R R +R + + I+VP+N HWY+ V+
Sbjct: 805 NLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYE 864
Query: 171 -----------------------DISHATATIWDSLESPSRRE-------KMINES-LAI 199
+ H T+T+ S E E KM + I
Sbjct: 865 DCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKKMCKRPCILI 924
Query: 200 LASLDFV--------LRQ------EARALFCNQFTFLNF-QICRQAGLPQQPNGFDCGYY 244
L SL LR+ E + +F+ N +C + +P+Q N DCG Y
Sbjct: 925 LDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPK--VPKQDNSSDCGVY 982
Query: 245 VMKYMDS 251
+++Y++S
Sbjct: 983 LLQYVES 989
>sp|B0BAX8|CDUB2_CHLTB Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2b (strain UCH-1/proctitis) GN=cdu2 PE=3 SV=1
Length = 339
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILA-SLDFVLRQEARALFCNQF 219
+ HW +++VDI + T +DSL + + E L LA SL + +E A +
Sbjct: 200 GNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGAIYPKEGGADSDQEE 259
Query: 220 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 274
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPKNPSERRALLADF 319
Query: 275 L 275
+
Sbjct: 320 I 320
>sp|B0B999|CDUB2_CHLT2 Deubiquitinase and deneddylase Dub2 OS=Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B) GN=cdu2 PE=3
SV=1
Length = 339
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILA-SLDFVLRQEARALFCNQF 219
+ HW +++VDI + T +DSL + + E L LA SL + +E A +
Sbjct: 200 GNSHWVLVIVDIEYRCVTFFDSLCDYVASPQQMREQLEGLAVSLGAIYPKEGGADSDQEE 259
Query: 220 TFLNFQICRQAGLP-QQPNGFDCGYYVMK----YMDSPCIVVHDSYQHDSDHARLLLALY 274
FQ+ + + Q P F CG + + Y+++P + + + R LLA +
Sbjct: 260 LLSPFQVRIGSTVKVQSPGEFTCGAWCCQFLAWYLENPDFDLEEKVPTNPSERRALLADF 319
Query: 275 L 275
+
Sbjct: 320 I 320
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYS-----QA 125
G S+T + L GE+++ II Y Y +++ +K+ F +Y +
Sbjct: 684 GGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRER 743
Query: 126 ALADWSSLNFAQAAGFRDRYMSR-LDTCEK--IYVPINSDGHWYMLVV 170
+ ++L+ Q R + +R +D EK I+VP+N HW++ VV
Sbjct: 744 RNPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVV 791
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 163 GHWYMLVVDISHATATIWDSLESPSRRE--KMINESLAILASLDFVLRQEARALFCNQFT 220
G W++ + DSL PSR K++ E L + ++ +++ ++ F
Sbjct: 978 GQWHLKPTVCKQPCILLMDSLRGPSRSNVVKILREYLEV----EWEVKKGSKRSFSK--- 1030
Query: 221 FLNFQICRQAGLPQQPNGFDCGYYVMKYMDS 251
+ +PQQ N DCG YV++Y++S
Sbjct: 1031 --DVMKGSNPKVPQQNNFSDCGVYVLQYVES 1059
>sp|B2VL36|OTC_ERWT9 Ornithine carbamoyltransferase OS=Erwinia tasmaniensis (strain DSM
17950 / Et1/99) GN=argI PE=3 SV=1
Length = 336
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Query: 95 TMYADYKNMKEA-EKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRDRYMSRLDTCE 153
T Y KN+ EKD T RC F + Q A W + +Q G ++
Sbjct: 40 TQYLKGKNIALIFEKDSTRTRCSFEVAAFDQGANVTWLGPSGSQ-IGHKESIKDTARVLG 98
Query: 154 KIYVPINSDGHWYMLVVDIS-HATATIWDSL 183
++Y I GH LV ++ HA +W+ L
Sbjct: 99 RMYHAIQYRGHGQQLVESLAEHAGVPVWNGL 129
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 163 GHWYMLVVDISHATATIWDSLESPSRRE--KMINESLAILASLDFVLRQEARALFCNQFT 220
G W++ + DSL PSR K++ E L + ++ +++ ++ F
Sbjct: 959 GQWHLKPTICKQPCILLMDSLRGPSRSNVVKILREYLEV----EWEVKKGSKRSFSK--- 1011
Query: 221 FLNFQICRQAGLPQQPNGFDCGYYVMKYMDS 251
+ +PQQ N DCG YV++Y++S
Sbjct: 1012 --DVMKGSNPKVPQQNNFSDCGVYVLQYVES 1040
Score = 34.7 bits (78), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 71 GDNSITRSSMRTLLPGEWIDGDIITMYADY---KNMKEAEKDVTSPRCWFLPTYYSQAAL 127
G S+T + L GE+++ II Y Y + +K+ + D F +Q
Sbjct: 664 GGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRER 723
Query: 128 ADWSSLNFA---QAAGFRDRYMSRLDTCEK--IYVPINSDGHWYMLVV 170
+ + N + + G + +D EK I+VP+N HW++ VV
Sbjct: 724 RNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVV 771
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 81/206 (39%), Gaps = 28/206 (13%)
Query: 74 SITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTS-PRCWFLPTYYSQAALADWSS 132
+IT + L +W++ I+ + + EK + + + +++ ++
Sbjct: 443 TITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFYTKLIS---- 498
Query: 133 LNFAQAAGFRDRYMSRLDTCEKIYV--PINSDGHWYMLVVDISHATATIW---DSLESPS 187
N A ++++ D K YV PIN HW+ ++ A D ++ +
Sbjct: 499 -NPADYYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQNKDKNDAIN 557
Query: 188 RREKMINESLAILASLDFVLRQEARAL-----FCNQFTFLNFQI--------CRQAGLPQ 234
E IN L + + D + + +R + F + + I + +PQ
Sbjct: 558 SDEISINNPLVNILTFDSLRQTHSREIDPIKEFLISYALDKYSIQLDKTQIKMKTCPVPQ 617
Query: 235 QPNGFDCGYYVM----KYMDSPCIVV 256
QPN DCG +V+ K+ ++P +
Sbjct: 618 QPNMSDCGVHVILNIRKFFENPVETI 643
>sp|O13612|NEP2_SCHPO NEDD8-specific protease 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep2 PE=1 SV=1
Length = 415
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 27/99 (27%)
Query: 155 IYVPIN--------SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFV 206
I++PIN S HW +LVV + +DS+ + + N+ + +L +
Sbjct: 154 IFLPINDTNECGIESGSHWSLLVVSVEKGLGWYYDSMSNGN-----TNDCNLAIKNLGIL 208
Query: 207 LRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYV 245
L++E R R PQQ N DCG +V
Sbjct: 209 LKKEFRV--------------RHMKTPQQINDCDCGLHV 233
>sp|O42980|NEP1_SCHPO NEDD8-specific protease 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nep1 PE=1 SV=2
Length = 420
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 37/150 (24%)
Query: 116 WFLPTYYSQAA--LADWSSLNF--AQAA----GFRDRYMSRLDTCEKIYVPIN------- 160
WF P+Y +QA L SL F A+AA + +L C+ +++PIN
Sbjct: 45 WF-PSYPNQANEILLLRPSLVFLLAEAAISPEELKVALPKKLMNCKYLFMPINDLDKHAA 103
Query: 161 --SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQ 218
HW ++V I +DSL + + K +LA ++ L F +
Sbjct: 104 GSGGSHWSLMVASIPDGQCYYYDSLSN--GKTKDCRSALARVSDL-----------FKKK 150
Query: 219 FTFLNFQICRQAGLPQQPNGFDCGYYVMKY 248
FT + QQ NG+DCG +V +
Sbjct: 151 FTIECMPVQ------QQRNGYDCGAHVCAF 174
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,610,872
Number of Sequences: 539616
Number of extensions: 4063073
Number of successful extensions: 7937
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 7881
Number of HSP's gapped (non-prelim): 49
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)