Query 022637
Match_columns 294
No_of_seqs 194 out of 1243
Neff 8.3
Searched_HMMs 13730
Date Mon Mar 25 08:42:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022637.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022637hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iy1a1 d.3.1.7 (A:419-643) Se 100.0 1.7E-45 1.2E-49 317.4 25.7 221 42-280 2-225 (225)
2 d1euva_ d.3.1.7 (A:) Ulp1 prot 100.0 1.3E-45 9.3E-50 317.5 21.8 215 42-280 4-220 (221)
3 d1th0a_ d.3.1.7 (A:) Sentrin-s 100.0 5.9E-45 4.3E-49 314.2 24.7 220 43-280 3-225 (226)
4 d2bkra1 d.3.1.7 (A:1-212) Sent 100.0 4.5E-37 3.3E-41 262.1 16.2 201 64-294 2-209 (212)
5 d1nlna_ d.3.1.7 (A:) Human ade 96.7 0.00099 7.2E-08 52.1 5.0 123 161-292 50-193 (203)
6 d2cxaa1 d.108.1.6 (A:1-232) Le 17.3 29 0.0021 27.1 2.1 16 85-100 108-123 (232)
7 d1q90g_ f.23.26.1 (G:) PetG su 14.4 35 0.0025 17.2 1.2 11 241-251 19-29 (30)
8 d1ev0a_ d.71.1.1 (A:) Cell div 13.3 51 0.0037 19.7 2.0 16 278-293 7-22 (58)
9 d1x93a1 a.43.1.3 (A:31-73) Unc 12.2 91 0.0066 16.4 2.6 26 269-294 17-42 (43)
10 d3bz7a1 b.34.3.1 (A:34-79) Myo 10.6 24 0.0017 19.2 -0.2 14 230-243 5-18 (46)
No 1
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.7e-45 Score=317.41 Aligned_cols=221 Identities=22% Similarity=0.326 Sum_probs=193.2
Q ss_pred CCCCCHHHHHHHHHHhccCCCCcceeeecCCeEEehhhhcccCCCCcccHHHHHHHHHHHhhhhhhhccCCCceEEccch
Q 022637 42 PSPISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTY 121 (294)
Q Consensus 42 ~~~ls~~~~~~~~~~l~~~~~~~~~l~~~~~~~l~~~dl~~L~~~~wLnD~vI~~~~~~ll~~~~~~~~~~~~~~~~~t~ 121 (294)
++|||+++++++..++..+ ++++++++++++.||++|+.+|.+++||||.||++|+++ +.++... ...+++++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~it~~Dl~~L~~~~wLnd~iI~~y~~~-l~~~~~~-~~~~~~~~~~t~ 78 (225)
T d2iy1a1 2 FPEITEEMEKEIKNVFRNG-NQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNM-LMERSKE-KGLPSVHAFNTF 78 (225)
T ss_dssp CCCCCHHHHHHHHHHSSSS-CTTCEEEEETTEEEEHHHHHTTSTTCCCBHHHHHHHHHH-HHHHTTS-TTSCCEEECCTT
T ss_pred CCCCCHHHHHHHHHHhcCC-CcCceeeecCCceeeHHHHHHhcCCcchhhHHHHHHHHH-HHHHhhh-hccCceEEeccH
Confidence 4899999999999999775 789999999999999999999999999999999999999 7765443 357899999999
Q ss_pred HHHHhhccccccchhhhhhhhhhcccCCCCCCeeEeeecCCCceeEEEEeecCceEEEecCCCCCCchhhhhHHHHHHHH
Q 022637 122 YSQAALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILA 201 (294)
Q Consensus 122 f~~~l~~~~~~~~~~~v~r~~~~~~~~l~~~d~IfiPIn~~~HW~L~vv~~~~~~i~~~DSl~~~~~~~~~l~~~~~i~~ 201 (294)
|+..+.. .++..+++|++ +.+++++++||||||.++||+|++|+++.+++.+||||++.+... ..
T Consensus 79 ~~~~~~~----~~~~~~~~~~~--~~~~~~~~~I~iPin~~~HW~l~vi~~~~~~i~~~DSl~~~~~~~---------~~ 143 (225)
T d2iy1a1 79 FFTKLKT----AGYQAVKRWTK--KVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEA---------CR 143 (225)
T ss_dssp HHHHHHH----SCGGGTGGGGT--TCCGGGSSEEEEEEECSSCEEEEEEETTTTEEEEECTTCCCCHHH---------HH
T ss_pred HHhhhcc----cCHHHHHHHHh--ccccccCCEEEEEEeCCCCEEEEEEEeccceEEEEecCCCCchHH---------HH
Confidence 9998877 67889999999 889999999999999999999999999999999999999987765 45
Q ss_pred HHHHHHHHHHHHhhCCCCCCCcceec--cCCccCCCCCCCCcHHHHHHhhHhhccccCCCC-CCCcHHHHHHHHHHHHcC
Q 022637 202 SLDFVLRQEARALFCNQFTFLNFQIC--RQAGLPQQPNGFDCGYYVMKYMDSPCIVVHDSY-QHDSDHARLLLALYLVQS 278 (294)
Q Consensus 202 ~l~~~l~~e~~~k~~~~~~~~~w~~~--~~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~~~-~~d~~~~R~~l~~~l~~~ 278 (294)
.+..++..++..+....++...|... ...++|||.||+|||+|||+||++++.+.+..+ +.+++.+|++|+.+|+.+
T Consensus 144 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pqQ~Ng~DCGvfvl~~~~~~~~~~~~~~~q~~~~~~R~~~~~~l~~~ 223 (225)
T d2iy1a1 144 ILLQYLKQESIDKKRKEFDTNGWQLFSKKSQEIPQQMNGSDAGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHR 223 (225)
T ss_dssp HHHHHHHHHHHHHHSSCCCCTTCEEEECCTTTSCCCCSSSTHHHHHHHHHHHHHTTCCCCCCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccCccCcccceecccccccCCCCCCCCChHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHHhC
Confidence 56667777777777777777788753 457899999999999999999999987655555 356899999999999987
Q ss_pred Cc
Q 022637 279 PL 280 (294)
Q Consensus 279 ~~ 280 (294)
.+
T Consensus 224 ~l 225 (225)
T d2iy1a1 224 KL 225 (225)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 2
>d1euva_ d.3.1.7 (A:) Ulp1 protease C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-45 Score=317.51 Aligned_cols=215 Identities=22% Similarity=0.415 Sum_probs=184.3
Q ss_pred CCCCCHHHHHHHHHHhccCCCCcceeeecCCeEEehhhhcccCCCCcccHHHHHHHHHHHhhhhhhhccCCCceEEccch
Q 022637 42 PSPISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTY 121 (294)
Q Consensus 42 ~~~ls~~~~~~~~~~l~~~~~~~~~l~~~~~~~l~~~dl~~L~~~~wLnD~vI~~~~~~ll~~~~~~~~~~~~~~~~~t~ 121 (294)
+|+||+++...++.+++. .+++++++.+++.||.+|+.+|.+++||||+|||+|+++ +.++ .+++++++|+
T Consensus 4 ~~~lt~~~~~~~~~~l~~--~~~~~~~~~~~~~it~~Dl~~L~~~~WLnD~iIn~y~~~-l~~~------~~~~~~~~s~ 74 (221)
T d1euva_ 4 VPELNEKDDDQVQKALAS--RENTQLMNRDNIEITVRDFKTLAPRRWLNDTIIEFFMKY-IEKS------TPNTVAFNSF 74 (221)
T ss_dssp SCCCCHHHHHHHHHHHTC--SSCCEEEEETTEEEEHHHHGGGSTTCCCBHHHHHHHHHH-HHHH------STTEEECCTH
T ss_pred CCCCCHHHHHHHHHHHcC--CCCceeeecCCcEEeHHHHhhcCCCcccCcHHHHHHHHH-HHhc------CCCeEEeccH
Confidence 379999999999999975 568889999999999999999999999999999999999 7653 6788999999
Q ss_pred HHHHhhccccccchhhhhhhhhhcccCCCCCCeeEeeec-CCCceeEEEEeecCceEEEecCCCCCCchhhhhHHHHHHH
Q 022637 122 YSQAALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPIN-SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAIL 200 (294)
Q Consensus 122 f~~~l~~~~~~~~~~~v~r~~~~~~~~l~~~d~IfiPIn-~~~HW~L~vv~~~~~~i~~~DSl~~~~~~~~~l~~~~~i~ 200 (294)
|+..+.. .+|..+++|+...+.+++++++|||||| +++||+|+|||+++++|++||||++.+... ...++
T Consensus 75 f~~~l~~----~~~~~~~~w~~~~~~~~~~~~~i~iPin~~~~HW~l~vi~~~~~~i~~~DSl~~~~~~~-----~~~i~ 145 (221)
T d1euva_ 75 FYTNLSE----RGYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKKTIGYVDSLSNGPNAM-----SFAIL 145 (221)
T ss_dssp HHHHHHH----HTGGGTTTTTGGGTSCGGGCSEEEEEEEETTTEEEEEEEETTTTEEEEECSSCCSCCHH-----HHHHH
T ss_pred HHHhHhh----hchHHHHHHHHhcccchhhcceeEeeEecccceEEEEEeeccccceeeeccccCCCcHH-----HHHHH
Confidence 9999988 6889999999766889999999999999 778999999999999999999999886655 33457
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCcceeccCCccCCCCCCCCcHHHHHHhhHhhccccCCCCC-CCcHHHHHHHHHHHHcCC
Q 022637 201 ASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVVHDSYQ-HDSDHARLLLALYLVQSP 279 (294)
Q Consensus 201 ~~l~~~l~~e~~~k~~~~~~~~~w~~~~~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~~~~-~d~~~~R~~l~~~l~~~~ 279 (294)
+.+..++..+...+.+. .|.+ ...++|||.||+|||+|||+||++++.+.+..|+ .|++.+|++|+.+|+++.
T Consensus 146 ~~l~~~l~~~~~~~~~~-----~~~~-~~~~~PqQ~N~~DCGvfvl~~~~~~~~~~~~~~~q~d~~~~R~~i~~~il~~~ 219 (221)
T d1euva_ 146 TDLQKYVMEESKHTIGE-----DFDL-IHLDCPQQPNGYDCGIYVCMNTLYGSADAPLDFDYKDAIRMRRFIAHLILTDA 219 (221)
T ss_dssp HHHHHHHHHHTTSSSCT-----TCEE-EEECCCCCSSSSTHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhcCC-----CCee-eeccCCCCCCCCChHHHHHHHHHHHhCCCCCccCHHHHHHHHHHHHHHHHHhh
Confidence 77888887765444332 3554 3568999999999999999999999876655553 568999999999999876
Q ss_pred c
Q 022637 280 L 280 (294)
Q Consensus 280 ~ 280 (294)
+
T Consensus 220 l 220 (221)
T d1euva_ 220 L 220 (221)
T ss_dssp T
T ss_pred c
Confidence 5
No 3
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.9e-45 Score=314.18 Aligned_cols=220 Identities=22% Similarity=0.330 Sum_probs=192.0
Q ss_pred CCCCHHHHHHHHHHhccCCCCcceeeecCCeEEehhhhcccCCCCcccHHHHHHHHHHHhhhhhhhccCCCceEEccchH
Q 022637 43 SPISEDAKQLILYLFDDKLNTMEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYY 122 (294)
Q Consensus 43 ~~ls~~~~~~~~~~l~~~~~~~~~l~~~~~~~l~~~dl~~L~~~~wLnD~vI~~~~~~ll~~~~~~~~~~~~~~~~~t~f 122 (294)
-+||+++++++..++..+ +.++++++.+++.|+++|+.+|.+++||||+|||||+++ +.++... ...+++++++|+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dl~~L~~~~WLnD~iI~~y~~~-l~~~~~~-~~~~~~~~~~~~f 79 (226)
T d1th0a_ 3 LELTEDMEKEISNALGHG-PQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNL-LVERNKK-QGYPALHVFSTFF 79 (226)
T ss_dssp CCCCHHHHHHHHHHHSSS-CTTCEEEEETTEEEEHHHHGGGSTTCCCCHHHHHHHHHH-HHHHHHH-HTCCCEEECCTTH
T ss_pred ccCCHHHHHHHHHHhcCC-CccceeeecCCceeEHHHHHhcCCCcccccHHHHHHHHH-HHHhhhh-ccCCceEEecHHH
Confidence 489999999999999886 789999999999999999999999999999999999999 7766543 3578999999999
Q ss_pred HHHhhccccccchhhhhhhhhhcccCCCCCCeeEeeecCCCceeEEEEeecCceEEEecCCCCCCchhhhhHHHHHHHHH
Q 022637 123 SQAALADWSSLNFAQAAGFRDRYMSRLDTCEKIYVPINSDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILAS 202 (294)
Q Consensus 123 ~~~l~~~~~~~~~~~v~r~~~~~~~~l~~~d~IfiPIn~~~HW~L~vv~~~~~~i~~~DSl~~~~~~~~~l~~~~~i~~~ 202 (294)
+..+.. .++..+++|++ +.+++++++||+|||.++||+|+|||++++++++|||+++.+... ...
T Consensus 80 ~~~l~~----~~~~~~~~~~~--~~~l~~~~~i~iPin~~~HW~L~vi~~~~~~i~~~DSl~~~~~~~---------~~~ 144 (226)
T d1th0a_ 80 YPKLKS----GGYQAVKRWTK--GVNLFEQEIILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKGHRI---------CEI 144 (226)
T ss_dssp HHHHHH----HTGGGTGGGGT--TCCGGGSSEEEEEEEETTEEEEEEEETTTTEEEEECTTCCCCHHH---------HHH
T ss_pred HHHHhh----ccHHHHHHHHh--ccCcccCCEEEEeEEcCCceEEEEEEeccceEEEeccccCCChHH---------HHH
Confidence 999987 67889999999 899999999999999999999999999999999999999887665 566
Q ss_pred HHHHHHHHHHHhhCCCCCCCccee--ccCCccCCCCCCCCcHHHHHHhhHhhccccCCCC-CCCcHHHHHHHHHHHHcCC
Q 022637 203 LDFVLRQEARALFCNQFTFLNFQI--CRQAGLPQQPNGFDCGYYVMKYMDSPCIVVHDSY-QHDSDHARLLLALYLVQSP 279 (294)
Q Consensus 203 l~~~l~~e~~~k~~~~~~~~~w~~--~~~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~~~-~~d~~~~R~~l~~~l~~~~ 279 (294)
+..++..++........+...|.. ..+..+|||.||+|||+|||+||++++.+.+..+ +.+++.+|.+|+.+|+.+.
T Consensus 145 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pqQ~N~~DCGvfvl~~~~~~~~~~~~~~tq~di~~~R~~i~~el~~~~ 224 (226)
T d1th0a_ 145 LLQYLQDESKTKRNSDLNLLEWTHHSMKPHEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEILHQQ 224 (226)
T ss_dssp HHHHHHHHHHHHTSCCCCGGGCEEEECCTTTSCCCCSSSCHHHHHHHHHHHHTTTCCCCCCGGGHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhCCCcCcccceeeeeccCCCCCCCCCCCHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHHHcC
Confidence 778888887777666666555553 3457899999999999999999999987655555 3678999999999999875
Q ss_pred c
Q 022637 280 L 280 (294)
Q Consensus 280 ~ 280 (294)
+
T Consensus 225 l 225 (226)
T d1th0a_ 225 L 225 (226)
T ss_dssp C
T ss_pred C
Confidence 4
No 4
>d2bkra1 d.3.1.7 (A:1-212) Sentrin-specific protease 8, SENP8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.5e-37 Score=262.13 Aligned_cols=201 Identities=19% Similarity=0.232 Sum_probs=150.5
Q ss_pred cceeeecCCeEEehhhhcccCCCCcccHHHHHHHHHHHhhhhhhhccCCCceEEccchHHHHhhccccccchhhhhhhhh
Q 022637 64 MEIVVDIGDNSITRSSMRTLLPGEWIDGDIITMYADYKNMKEAEKDVTSPRCWFLPTYYSQAALADWSSLNFAQAAGFRD 143 (294)
Q Consensus 64 ~~~l~~~~~~~l~~~dl~~L~~~~wLnD~vI~~~~~~ll~~~~~~~~~~~~~~~~~t~f~~~l~~~~~~~~~~~v~r~~~ 143 (294)
++++++++++.|+.+|+.+|.+++||||+||++|+++ |.++... ....++++++|+++..+... .+++.+++|++
T Consensus 2 ~pi~~~~~d~~l~~~D~~~L~~~~WLND~iId~y~~~-l~~~~~~-~~~~~~~f~~~~~~~~~~~~---~~~~~~~~~~~ 76 (212)
T d2bkra1 2 DPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEY-FANSQFH-DSSDHVSFISPEVTQFIKCT---SNPAEIAMFLE 76 (212)
T ss_dssp CCEEEEETTEEEEHHHHHTTSTTSCCBHHHHHHHHHH-HHHTTTG-GGTTTEEEECHHHHHHHHHC---CCHHHHHHHHG
T ss_pred CCEEEEEeCeeeeHHHHhhcCCCCCcCHHHHHHHHHH-HHHhhhc-cccCcEEEEChHHHHHHhcc---ccHHHHHHHHh
Confidence 3589999999999999999999999999999999999 7654332 24678999999998877653 46788999999
Q ss_pred hcccCCCCCCeeEeeec-------CCCceeEEEEeecCceEEEecCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhhC
Q 022637 144 RYMSRLDTCEKIYVPIN-------SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFC 216 (294)
Q Consensus 144 ~~~~~l~~~d~IfiPIn-------~~~HW~L~vv~~~~~~i~~~DSl~~~~~~~~~l~~~~~i~~~l~~~l~~e~~~k~~ 216 (294)
+.+++++++||+||| +|+||+|+|||++++++++|||+++.+... .+.+...+.......
T Consensus 77 --~~~~~~~~~ifiPIn~~~~~~~~g~HW~l~vi~~~~~~i~~~DSl~~~~~~~---------~~~~~~~l~~~~~~~-- 143 (212)
T d2bkra1 77 --PLDLPNKRVVFLAINDNSNQAAGGSHWSLLVYLQDKNSFFHYDSHSRSNSVH---------AKQVAEKLEAFLGRK-- 143 (212)
T ss_dssp --GGTGGGCSEEEEEEECCCSSSSBCCCEEEEEEEGGGTEEEEECSSTTTTHHH---------HHHHHHHHHHHHSCT--
T ss_pred --ccChhhccEEEEecccccccccCcceeeeeeeccccceEEEecCCCcCCHHH---------HHHHHHHHHHHhccc--
Confidence 889999999999999 358999999999999999999999887665 233444444332211
Q ss_pred CCCCCCcceeccCCccCCCCCCCCcHHHHHHhhHhhccccCCCCCCCcHHHHHHHHHHHHcCCcHHHHHHHHHHHHhC
Q 022637 217 NQFTFLNFQICRQAGLPQQPNGFDCGYYVMKYMDSPCIVVHDSYQHDSDHARLLLALYLVQSPLNKIRCRLIQEARKL 294 (294)
Q Consensus 217 ~~~~~~~w~~~~~~~~PqQ~Ng~DCGvfvl~~~e~~~~~~~~~~~~d~~~~R~~l~~~l~~~~~n~~R~~~~~~i~~~ 294 (294)
...+.+ ....+|||.||+|||+|||+||++++.........+. ...+-...+..+|.+|+++|.+|
T Consensus 144 ----~~~~~~-~~~~~p~Q~N~~DCGvfv~~~~~~l~~~~~~~~~~~~-------~~~~~~~~i~~~R~~l~~lI~~L 209 (212)
T d2bkra1 144 ----GDKLAF-VEEKAPAQQNSYDCGMYVICNTEALCQNFFRQQTESL-------LQLLTPAYITKKRGEWKDLIATL 209 (212)
T ss_dssp ----TCCCCE-EECCCCCCSSSSTHHHHHHHHHHHHHHHHHSCCCCCH-------HHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ----cCceee-eecccCCCCCCCChHHHHHHHHHHHHHhcccccchhh-------hhcCCHHHHHHHHHHHHHHHHHH
Confidence 112333 3578999999999999999999998643221111110 01111234567888888888764
No 5
>d1nlna_ d.3.1.7 (A:) Human adenovirus 2 proteinase, adenain {Mastadenovirus H2 [TaxId: 10515]}
Probab=96.66 E-value=0.00099 Score=52.14 Aligned_cols=123 Identities=15% Similarity=0.197 Sum_probs=71.1
Q ss_pred CCCceeEEEEeecCceEEEecCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceeccCCccCCCCCCCC
Q 022637 161 SDGHWYMLVVDISHATATIWDSLESPSRREKMINESLAILASLDFVLRQEARALFCNQFTFLNFQICRQAGLPQQPNGFD 240 (294)
Q Consensus 161 ~~~HW~L~vv~~~~~~i~~~DSl~~~~~~~~~l~~~~~i~~~l~~~l~~e~~~k~~~~~~~~~w~~~~~~~~PqQ~Ng~D 240 (294)
+|.||.-+..|+..++++++|.+|-++.+-+++..- . -...|+...-... .+ .-.+++...+.-|-+++-.
T Consensus 50 GG~HWlA~Aw~P~s~t~Y~FDPfGfsd~~L~q~Y~F-e----Y~~llkRSAL~~s-pd---RCvtlvkstq~VQcp~Saa 120 (203)
T d1nlna_ 50 GGVHWMAFAWNPRSKTCYLFEPFGFSDQRLKQVYQF-E----YESLLRRSAIASS-PD---RCITLEKSTQSVQGPNSAA 120 (203)
T ss_dssp CCCCEEEEEEETTTTEEEEECTTCCCHHHHHHHHCC-C----CHHHHHHHHHHHC-TT---SEEEEEEECEECSCTTCCC
T ss_pred CceeeEEeEecCCcCeEEEECCCCCCHHHHHHHhhh-h----HHHHHHHHhhcCC-CC---ceEEEEeccceecCCCchh
Confidence 788999999999999999999999885543211100 0 0111111111000 00 1122333345556677889
Q ss_pred cHHHHHHhhHhhccccCCCCCC----C---------------cHHHHH--HHHHHHHcCCcHHHHHHHHHHHH
Q 022637 241 CGYYVMKYMDSPCIVVHDSYQH----D---------------SDHARL--LLALYLVQSPLNKIRCRLIQEAR 292 (294)
Q Consensus 241 CGvfvl~~~e~~~~~~~~~~~~----d---------------~~~~R~--~l~~~l~~~~~n~~R~~~~~~i~ 292 (294)
||+|.|.|+..+......++.. | ++.+|. ...+..+......+|++--+.++
T Consensus 121 CGLFC~lFL~aF~~~p~~pm~~Np~mdl~~Gvp~~~l~sP~~~~~l~~NQe~LY~fl~~~S~YFr~~~~~i~~ 193 (203)
T d1nlna_ 121 CGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNSPQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRS 193 (203)
T ss_dssp HHHHHHHHHHHHHHCTTSCSSSSTTGGGSCCEEGGGTTCGGGHHHHHHHHHHHHHHHHHHCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCcceehhcCcCccccCCCcchHHHHhhHHHHHHHHHhcCHHHHHhHHHHHH
Confidence 9999999998875544444311 1 123333 35566666667777776665544
No 6
>d2cxaa1 d.108.1.6 (A:1-232) Leucyl/phenylalanyl-tRNA-protein transferase, LFTR (Aat) {Escherichia coli [TaxId: 562]}
Probab=17.32 E-value=29 Score=27.11 Aligned_cols=16 Identities=25% Similarity=0.738 Sum_probs=13.9
Q ss_pred CCCcccHHHHHHHHHH
Q 022637 85 PGEWIDGDIITMYADY 100 (294)
Q Consensus 85 ~~~wLnD~vI~~~~~~ 100 (294)
++.||++++|++|.++
T Consensus 108 ~~tWI~~~ii~aY~~L 123 (232)
T d2cxaa1 108 EGTWITRGVVEAYHRL 123 (232)
T ss_dssp -CTTCCHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHH
Confidence 4679999999999987
No 7
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=14.36 E-value=35 Score=17.16 Aligned_cols=11 Identities=27% Similarity=0.733 Sum_probs=7.9
Q ss_pred cHHHHHHhhHh
Q 022637 241 CGYYVMKYMDS 251 (294)
Q Consensus 241 CGvfvl~~~e~ 251 (294)
+|+||-+|.+|
T Consensus 19 ~Glfv~AylQY 29 (30)
T d1q90g_ 19 AGLFVTAYLQY 29 (30)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 47788777765
No 8
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=13.30 E-value=51 Score=19.69 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=13.3
Q ss_pred CCcHHHHHHHHHHHHh
Q 022637 278 SPLNKIRCRLIQEARK 293 (294)
Q Consensus 278 ~~~n~~R~~~~~~i~~ 293 (294)
.-++.+|++|++.|+|
T Consensus 7 DyLp~Lq~eil~VI~K 22 (58)
T d1ev0a_ 7 HYLPQLRKDILEVICK 22 (58)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 3467899999999987
No 9
>d1x93a1 a.43.1.3 (A:31-73) Uncharacterized protein HP0222 {Helicobacter pylori [TaxId: 210]}
Probab=12.17 E-value=91 Score=16.44 Aligned_cols=26 Identities=19% Similarity=0.075 Sum_probs=20.0
Q ss_pred HHHHHHHHcCCcHHHHHHHHHHHHhC
Q 022637 269 LLLALYLVQSPLNKIRCRLIQEARKL 294 (294)
Q Consensus 269 ~~l~~~l~~~~~n~~R~~~~~~i~~~ 294 (294)
.+|+.+--.+--..+++.|+.++||.
T Consensus 17 ekmaneeeesvgsyikryilkalrki 42 (43)
T d1x93a1 17 EKMANEEEESVGSYIKRYILKALRKI 42 (43)
T ss_dssp HHHHHHTTSCTTHHHHHHHHHHHTCC
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHcc
Confidence 46777766777778889999998874
No 10
>d3bz7a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=10.58 E-value=24 Score=19.16 Aligned_cols=14 Identities=21% Similarity=0.710 Sum_probs=11.2
Q ss_pred CccCCCCCCCCcHH
Q 022637 230 AGLPQQPNGFDCGY 243 (294)
Q Consensus 230 ~~~PqQ~Ng~DCGv 243 (294)
.+-|...++|.||-
T Consensus 5 npdpkerdsyecge 18 (46)
T d3bz7a1 5 NPDPKERDSYECGE 18 (46)
T ss_dssp CSSTTCTTCCEEEE
T ss_pred CCCccccccchhcc
Confidence 45688899999994
Done!