Query 022641
Match_columns 294
No_of_seqs 204 out of 2513
Neff 10.4
Searched_HMMs 13730
Date Mon Mar 25 08:45:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022641.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022641hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sxjb2 c.37.1.20 (B:7-230) Re 100.0 1.5E-37 1.1E-41 248.7 22.3 222 48-278 2-223 (224)
2 d1sxjc2 c.37.1.20 (C:12-238) R 100.0 5.6E-37 4.1E-41 245.9 20.8 222 49-279 2-227 (227)
3 d1njfa_ c.37.1.20 (A:) delta p 100.0 1.1E-35 7.7E-40 239.8 25.5 218 51-278 2-238 (239)
4 d1sxjd2 c.37.1.20 (D:26-262) R 100.0 9.4E-37 6.9E-41 246.2 18.8 229 50-278 1-236 (237)
5 d1iqpa2 c.37.1.20 (A:2-232) Re 100.0 4.4E-36 3.2E-40 241.2 18.9 220 48-277 11-230 (231)
6 d1sxje2 c.37.1.20 (E:4-255) Re 100.0 3.2E-31 2.4E-35 215.4 21.1 213 51-263 1-240 (252)
7 d1sxja2 c.37.1.20 (A:295-547) 100.0 3.2E-31 2.3E-35 215.6 20.3 223 50-279 3-248 (253)
8 d1in4a2 c.37.1.20 (A:17-254) H 100.0 2.9E-29 2.1E-33 202.0 24.5 205 54-280 2-234 (238)
9 d1ixsb2 c.37.1.20 (B:4-242) Ho 100.0 2.4E-28 1.8E-32 196.7 23.8 204 55-279 3-234 (239)
10 d1a5ta2 c.37.1.20 (A:1-207) de 99.9 5.3E-26 3.9E-30 178.1 20.0 180 64-258 5-206 (207)
11 d1lv7a_ c.37.1.20 (A:) AAA dom 99.9 7E-24 5.1E-28 170.5 17.9 203 57-280 8-252 (256)
12 d1ixza_ c.37.1.20 (A:) AAA dom 99.9 3.1E-24 2.2E-28 172.0 15.1 203 58-277 6-246 (247)
13 d1e32a2 c.37.1.20 (A:201-458) 99.9 1.7E-21 1.2E-25 157.4 16.5 176 59-255 2-216 (258)
14 d1fnna2 c.37.1.20 (A:1-276) CD 99.8 6.6E-20 4.8E-24 149.6 21.0 228 48-280 6-273 (276)
15 d2gnoa2 c.37.1.20 (A:11-208) g 99.8 4.1E-20 3E-24 142.7 14.3 138 69-216 2-140 (198)
16 d1r6bx2 c.37.1.20 (X:169-436) 99.8 2.5E-19 1.8E-23 143.5 19.2 221 47-279 4-264 (268)
17 d1l8qa2 c.37.1.20 (A:77-289) C 99.8 6.3E-19 4.6E-23 137.8 17.4 186 59-261 8-211 (213)
18 d1w5sa2 c.37.1.20 (A:7-293) CD 99.8 4.1E-19 3E-23 145.6 16.3 230 47-279 5-286 (287)
19 d1r7ra3 c.37.1.20 (A:471-735) 99.8 6.6E-21 4.8E-25 154.4 4.8 176 59-255 5-222 (265)
20 d1qvra2 c.37.1.20 (A:149-535) 99.8 7.2E-18 5.2E-22 142.3 14.9 207 47-264 8-244 (387)
21 d1ny5a2 c.37.1.20 (A:138-384) 99.7 2.6E-17 1.9E-21 131.4 15.5 212 62-276 1-246 (247)
22 d1d2na_ c.37.1.20 (A:) Hexamer 99.7 7E-17 5.1E-21 128.8 13.9 157 84-261 42-222 (246)
23 d1jbka_ c.37.1.20 (A:) ClpB, A 99.7 1.3E-16 9.5E-21 120.7 11.3 166 47-223 8-194 (195)
24 d1ofha_ c.37.1.20 (A:) HslU {H 99.7 3.7E-17 2.7E-21 135.1 8.2 148 62-224 15-211 (309)
25 d1g8pa_ c.37.1.20 (A:) ATPase 99.7 3.8E-16 2.7E-20 130.7 14.1 219 58-278 4-303 (333)
26 d1r6bx3 c.37.1.20 (X:437-751) 99.7 1.3E-15 9.3E-20 125.9 16.7 166 61-245 22-257 (315)
27 d1um8a_ c.37.1.20 (A:) ClpX {H 99.6 1.7E-15 1.2E-19 127.1 15.0 173 61-245 17-313 (364)
28 d1qvra3 c.37.1.20 (A:536-850) 99.6 1.8E-15 1.3E-19 124.6 14.2 181 61-245 23-262 (315)
29 d1svma_ c.37.1.20 (A:) Papillo 99.5 1.3E-15 9.8E-20 127.5 -1.1 177 83-275 155-349 (362)
30 d1w44a_ c.37.1.11 (A:) NTPase 99.4 9.3E-13 6.8E-17 107.3 11.4 120 84-224 125-271 (321)
31 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.3 2.1E-11 1.6E-15 98.4 16.7 187 59-258 10-250 (283)
32 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 1.1E-10 8.2E-15 99.8 16.3 56 62-123 15-84 (443)
33 d2a5yb3 c.37.1.20 (B:109-385) 99.2 2E-10 1.4E-14 92.7 16.3 185 62-256 21-228 (277)
34 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.7 2.2E-08 1.6E-12 74.8 8.5 23 84-106 2-24 (178)
35 d1tuea_ c.37.1.20 (A:) Replica 98.6 8.5E-08 6.2E-12 71.5 9.6 117 68-212 38-172 (205)
36 d1gvnb_ c.37.1.21 (B:) Plasmid 98.6 2.9E-08 2.1E-12 79.4 6.4 33 84-122 34-66 (273)
37 d1w36d1 c.37.1.19 (D:2-360) Ex 98.6 1.8E-07 1.3E-11 77.6 10.8 123 67-195 151-298 (359)
38 d1kaga_ c.37.1.2 (A:) Shikimat 98.4 1.2E-07 8.5E-12 69.6 4.1 30 83-118 3-32 (169)
39 d1rkba_ c.37.1.1 (A:) Adenylat 98.4 1.2E-07 9E-12 70.1 4.0 31 82-118 4-34 (173)
40 d1ly1a_ c.37.1.1 (A:) Polynucl 98.3 5.4E-06 4E-10 59.5 12.2 23 84-106 4-26 (152)
41 d1yj5a2 c.37.1.1 (A:351-522) 5 98.3 9.9E-07 7.2E-11 65.2 8.0 80 84-187 16-95 (172)
42 d2iyva1 c.37.1.2 (A:2-166) Shi 98.3 2.1E-07 1.6E-11 68.5 4.3 32 83-120 2-33 (165)
43 d1a1va1 c.37.1.14 (A:190-325) 98.3 1.9E-06 1.4E-10 61.0 8.4 92 83-181 9-120 (136)
44 d1viaa_ c.37.1.2 (A:) Shikimat 98.2 4.1E-07 3E-11 66.6 4.0 30 84-119 2-31 (161)
45 d1lw7a2 c.37.1.1 (A:220-411) T 98.2 3.5E-07 2.5E-11 68.4 3.2 24 83-106 8-31 (192)
46 d2i3ba1 c.37.1.11 (A:1-189) Ca 98.1 6.9E-07 5E-11 66.6 4.0 25 83-107 2-26 (189)
47 d1e6ca_ c.37.1.2 (A:) Shikimat 98.1 7.9E-07 5.8E-11 65.6 4.0 30 84-119 4-33 (170)
48 d1yksa1 c.37.1.14 (A:185-324) 98.1 6.3E-06 4.6E-10 58.1 8.1 18 83-100 8-25 (140)
49 d1y63a_ c.37.1.1 (A:) Probable 98.1 1.1E-06 8.3E-11 64.7 4.0 26 81-106 4-29 (174)
50 d1knqa_ c.37.1.17 (A:) Glucona 98.1 1.3E-06 9.4E-11 64.3 4.2 23 84-106 8-30 (171)
51 d1zp6a1 c.37.1.25 (A:6-181) Hy 98.0 8.1E-07 5.9E-11 65.7 2.7 32 84-121 6-37 (176)
52 d2bdta1 c.37.1.25 (A:1-176) Hy 98.0 1.4E-06 1E-10 64.1 3.8 23 84-106 4-26 (176)
53 d1qhxa_ c.37.1.3 (A:) Chloramp 98.0 2.4E-06 1.7E-10 63.0 4.8 24 83-106 4-27 (178)
54 d2cdna1 c.37.1.1 (A:1-181) Ade 98.0 2E-05 1.4E-09 58.4 10.0 23 84-106 2-24 (181)
55 d2fz4a1 c.37.1.19 (A:24-229) D 98.0 2.1E-05 1.5E-09 59.6 10.2 40 64-106 70-109 (206)
56 d1okkd2 c.37.1.10 (D:97-303) G 98.0 9.4E-06 6.8E-10 61.3 8.0 26 82-107 6-31 (207)
57 d1m8pa3 c.37.1.15 (A:391-573) 98.0 1.8E-06 1.3E-10 63.9 3.7 24 84-107 8-31 (183)
58 d2qy9a2 c.37.1.10 (A:285-495) 98.0 6.8E-06 5E-10 62.2 6.5 24 84-107 11-34 (211)
59 d1u0ja_ c.37.1.20 (A:) Rep 40 97.9 4.1E-05 3E-09 60.2 10.8 124 71-224 91-248 (267)
60 d1ls1a2 c.37.1.10 (A:89-295) G 97.9 1.3E-05 9.5E-10 60.6 7.5 96 85-185 13-124 (207)
61 d1zina1 c.37.1.1 (A:1-125,A:16 97.9 3.2E-06 2.3E-10 62.8 4.0 23 84-106 2-24 (182)
62 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.9 2E-06 1.5E-10 64.7 2.8 26 81-106 5-30 (194)
63 d1zaka1 c.37.1.1 (A:3-127,A:15 97.9 2.9E-06 2.1E-10 63.6 3.4 25 82-106 3-27 (189)
64 d1j8yf2 c.37.1.10 (F:87-297) G 97.9 1.8E-05 1.3E-09 59.8 7.8 146 84-233 14-182 (211)
65 d1vmaa2 c.37.1.10 (A:82-294) G 97.9 5.6E-06 4.1E-10 62.8 4.9 23 85-107 14-36 (213)
66 d2pmka1 c.37.1.12 (A:467-707) 97.9 5E-05 3.6E-09 58.7 10.3 44 154-197 156-200 (241)
67 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.9 5.3E-06 3.8E-10 62.2 4.5 24 83-106 4-27 (190)
68 d1np6a_ c.37.1.10 (A:) Molybdo 97.9 4.6E-06 3.4E-10 61.0 3.8 25 83-107 3-27 (170)
69 d1ukza_ c.37.1.1 (A:) Uridylat 97.8 5.4E-06 3.9E-10 62.5 4.0 24 83-106 9-32 (196)
70 d1x6va3 c.37.1.4 (A:34-228) Ad 97.8 4.9E-06 3.6E-10 62.4 3.5 24 84-107 21-44 (195)
71 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.8 8.1E-06 5.9E-10 61.1 4.3 24 83-106 7-30 (189)
72 d2awna2 c.37.1.12 (A:4-235) Ma 97.8 5.1E-05 3.7E-09 58.1 8.7 43 154-196 147-192 (232)
73 d2hyda1 c.37.1.12 (A:324-578) 97.8 7.1E-05 5.1E-09 58.3 9.7 43 154-196 171-214 (255)
74 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.8 9.4E-06 6.9E-10 60.3 4.3 23 84-106 2-24 (182)
75 d3b60a1 c.37.1.12 (A:329-581) 97.8 0.00012 8.7E-09 57.0 10.9 43 154-196 169-212 (253)
76 d3adka_ c.37.1.1 (A:) Adenylat 97.8 7.3E-06 5.3E-10 61.6 3.7 24 83-106 9-32 (194)
77 d1teva_ c.37.1.1 (A:) UMP/CMP 97.8 8.5E-06 6.2E-10 61.2 4.0 24 83-106 2-25 (194)
78 d1akya1 c.37.1.1 (A:3-130,A:16 97.7 9.3E-06 6.7E-10 60.3 3.8 23 84-106 4-26 (180)
79 d1e4va1 c.37.1.1 (A:1-121,A:15 97.7 8.7E-06 6.3E-10 60.3 3.5 23 84-106 2-24 (179)
80 d1ckea_ c.37.1.1 (A:) CMP kina 97.7 1.2E-05 8.9E-10 61.6 4.4 25 82-106 3-27 (225)
81 d1v43a3 c.37.1.12 (A:7-245) Hy 97.7 9.4E-05 6.8E-09 56.8 9.3 43 154-196 153-198 (239)
82 d1g6oa_ c.37.1.11 (A:) Hexamer 97.7 0.00011 7.9E-09 59.5 10.1 38 67-106 153-190 (323)
83 d1ji0a_ c.37.1.12 (A:) Branche 97.7 4.9E-05 3.6E-09 58.8 7.1 52 154-206 156-209 (240)
84 d1khta_ c.37.1.1 (A:) Adenylat 97.6 1.7E-05 1.2E-09 58.9 4.0 24 84-107 3-26 (190)
85 d2eyqa3 c.37.1.19 (A:546-778) 97.6 0.00036 2.6E-08 53.3 11.5 48 59-106 53-100 (233)
86 d1wp9a1 c.37.1.19 (A:1-200) pu 97.6 3.1E-05 2.2E-09 58.2 5.3 23 84-106 25-47 (200)
87 d1rz3a_ c.37.1.6 (A:) Hypothet 97.6 4.5E-05 3.3E-09 56.9 5.8 22 85-106 25-46 (198)
88 d1q3ta_ c.37.1.1 (A:) CMP kina 97.6 2.3E-05 1.7E-09 60.0 4.1 22 85-106 6-27 (223)
89 d1bifa1 c.37.1.7 (A:37-249) 6- 97.6 2E-05 1.5E-09 59.7 3.7 22 85-106 5-26 (213)
90 d1jj7a_ c.37.1.12 (A:) Peptide 97.5 0.00038 2.8E-08 54.0 10.5 43 154-196 168-213 (251)
91 d1m7ga_ c.37.1.4 (A:) Adenosin 97.5 5.3E-05 3.9E-09 57.4 5.0 31 76-106 18-48 (208)
92 d1vpla_ c.37.1.12 (A:) Putativ 97.5 0.00025 1.8E-08 54.6 8.8 43 154-196 150-194 (238)
93 d1p9ra_ c.37.1.11 (A:) Extrace 97.5 0.0011 7.9E-08 55.2 13.3 49 58-107 135-183 (401)
94 d1nksa_ c.37.1.1 (A:) Adenylat 97.5 3E-05 2.2E-09 57.7 3.2 23 84-106 3-25 (194)
95 d2p6ra3 c.37.1.19 (A:1-202) He 97.4 7.6E-05 5.5E-09 56.2 5.3 38 155-192 138-179 (202)
96 d1lvga_ c.37.1.1 (A:) Guanylat 97.4 4.7E-05 3.4E-09 56.8 3.9 23 84-106 2-24 (190)
97 d1gkya_ c.37.1.1 (A:) Guanylat 97.4 4E-05 2.9E-09 57.0 3.5 23 84-106 3-25 (186)
98 d1mv5a_ c.37.1.12 (A:) Multidr 97.4 0.00012 8.9E-09 56.5 6.3 23 84-106 30-52 (242)
99 d1znwa1 c.37.1.1 (A:20-201) Gu 97.3 7.2E-05 5.2E-09 55.3 3.8 23 84-106 4-26 (182)
100 d1kaoa_ c.37.1.8 (A:) Rap2a {H 97.3 0.0043 3.2E-07 44.4 13.3 22 85-106 6-27 (167)
101 d1l7vc_ c.37.1.12 (C:) ABC tra 97.2 0.00031 2.2E-08 53.9 6.6 52 155-207 150-203 (231)
102 d1z2aa1 c.37.1.8 (A:8-171) Rab 97.2 0.00024 1.7E-08 51.4 5.7 21 85-105 5-25 (164)
103 d2gj8a1 c.37.1.8 (A:216-376) P 97.2 0.00056 4.1E-08 49.0 7.3 22 84-105 3-24 (161)
104 d1xjca_ c.37.1.10 (A:) Molybdo 97.2 0.00013 9.3E-09 53.0 3.7 24 84-107 3-26 (165)
105 d1g6ha_ c.37.1.12 (A:) MJ1267 97.2 0.0012 8.6E-08 51.2 9.5 52 154-206 167-220 (254)
106 d1htwa_ c.37.1.18 (A:) Hypothe 97.2 0.00039 2.8E-08 49.5 6.0 24 84-107 35-58 (158)
107 d1gm5a3 c.37.1.19 (A:286-549) 97.1 0.00033 2.4E-08 54.6 6.0 43 64-106 86-128 (264)
108 d1zj6a1 c.37.1.8 (A:2-178) ADP 97.1 0.002 1.4E-07 46.7 10.2 25 81-105 14-38 (177)
109 d1r2qa_ c.37.1.8 (A:) Rab5a {H 97.1 0.00091 6.6E-08 48.4 8.2 23 85-107 9-31 (170)
110 d1kgda_ c.37.1.1 (A:) Guanylat 97.1 0.00017 1.3E-08 53.0 3.6 23 84-106 5-27 (178)
111 d1s96a_ c.37.1.1 (A:) Guanylat 97.1 0.0002 1.5E-08 53.9 4.0 23 84-106 4-26 (205)
112 d1uj2a_ c.37.1.6 (A:) Uridine- 97.0 0.00018 1.3E-08 54.4 3.6 22 85-106 5-26 (213)
113 d1yzqa1 c.37.1.8 (A:14-177) Ra 97.0 0.0019 1.4E-07 46.3 9.0 22 85-106 3-24 (164)
114 d1qdea_ c.37.1.19 (A:) Initiat 97.0 0.0019 1.4E-07 48.6 9.2 41 153-193 149-190 (212)
115 d1mh1a_ c.37.1.8 (A:) Rac {Hum 97.0 0.0002 1.5E-08 52.8 3.3 22 85-106 8-29 (183)
116 d2g9na1 c.37.1.19 (A:21-238) I 97.0 0.003 2.2E-07 47.7 9.9 41 154-194 154-195 (218)
117 d1xtqa1 c.37.1.8 (A:3-169) GTP 96.9 0.00043 3.1E-08 50.1 4.8 23 84-106 6-28 (167)
118 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.9 0.00027 1.9E-08 50.5 3.6 23 85-107 3-25 (160)
119 d1ctqa_ c.37.1.8 (A:) cH-p21 R 96.9 0.0016 1.2E-07 46.8 8.0 22 85-106 6-27 (166)
120 d1u8za_ c.37.1.8 (A:) Ras-rela 96.9 0.0026 1.9E-07 45.8 8.9 22 85-106 7-28 (168)
121 d2fn4a1 c.37.1.8 (A:24-196) r- 96.9 0.0014 1E-07 47.6 7.3 22 85-106 9-30 (173)
122 d1s2ma1 c.37.1.19 (A:46-251) P 96.9 0.0055 4E-07 45.7 10.9 39 154-192 142-181 (206)
123 d1wf3a1 c.37.1.8 (A:3-180) GTP 96.9 0.033 2.4E-06 40.0 15.0 22 84-105 7-28 (178)
124 d1szpa2 c.37.1.11 (A:145-395) 96.8 0.00055 4E-08 52.6 5.0 23 84-106 36-58 (251)
125 d1wb9a2 c.37.1.12 (A:567-800) 96.8 0.0055 4E-07 46.7 10.6 24 83-106 42-65 (234)
126 d2p67a1 c.37.1.10 (A:1-327) LA 96.8 0.00053 3.9E-08 55.3 5.0 27 81-107 53-79 (327)
127 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 96.8 0.00011 8.2E-09 53.9 0.8 23 85-107 5-27 (177)
128 d1n0wa_ c.37.1.11 (A:) DNA rep 96.8 0.00059 4.3E-08 51.5 5.0 26 84-109 25-50 (242)
129 d1l2ta_ c.37.1.12 (A:) MJ0796 96.8 0.00031 2.3E-08 53.6 3.3 42 154-195 162-206 (230)
130 d1veca_ c.37.1.19 (A:) DEAD bo 96.8 0.0033 2.4E-07 47.0 9.1 39 154-192 145-184 (206)
131 d1c1ya_ c.37.1.8 (A:) Rap1A {H 96.8 0.0025 1.8E-07 45.8 8.1 23 85-107 6-28 (167)
132 d1v5wa_ c.37.1.11 (A:) Meiotic 96.8 0.00088 6.4E-08 51.7 5.9 24 85-108 40-63 (258)
133 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 96.8 0.00044 3.2E-08 50.6 3.6 22 84-105 15-36 (186)
134 d1pzna2 c.37.1.11 (A:96-349) D 96.7 0.00044 3.2E-08 53.5 3.7 23 85-107 39-61 (254)
135 d1u0la2 c.37.1.8 (A:69-293) Pr 96.7 0.00052 3.8E-08 52.0 3.9 33 70-105 86-118 (225)
136 d1yrba1 c.37.1.10 (A:1-244) AT 96.7 0.00044 3.2E-08 53.2 3.6 22 85-106 3-24 (244)
137 d1odfa_ c.37.1.6 (A:) Hypothet 96.7 0.00071 5.2E-08 53.3 4.8 22 85-106 30-51 (286)
138 d2onka1 c.37.1.12 (A:1-240) Mo 96.7 0.00042 3.1E-08 53.0 3.3 43 154-196 143-188 (240)
139 d1g2912 c.37.1.12 (1:1-240) Ma 96.7 0.00053 3.8E-08 52.6 3.6 43 154-196 156-201 (240)
140 d1upta_ c.37.1.8 (A:) ADP-ribo 96.7 0.0005 3.7E-08 49.4 3.4 23 84-106 7-29 (169)
141 d2bmea1 c.37.1.8 (A:6-179) Rab 96.7 0.0017 1.2E-07 47.1 6.3 22 85-106 8-29 (174)
142 d1m7ba_ c.37.1.8 (A:) RhoE (RN 96.7 0.00022 1.6E-08 52.5 1.2 22 85-106 5-26 (179)
143 d2qm8a1 c.37.1.10 (A:5-327) Me 96.7 0.0012 8.9E-08 53.1 5.8 24 83-106 52-75 (323)
144 d1sgwa_ c.37.1.12 (A:) Putativ 96.7 0.00049 3.5E-08 51.5 3.2 24 83-106 28-51 (200)
145 d1ewqa2 c.37.1.12 (A:542-765) 96.6 0.0058 4.2E-07 46.2 9.3 23 84-106 37-59 (224)
146 d1tf7a2 c.37.1.11 (A:256-497) 96.6 0.00056 4.1E-08 52.6 3.5 24 84-107 28-51 (242)
147 d2j0sa1 c.37.1.19 (A:22-243) P 96.6 0.0076 5.5E-07 45.5 10.0 41 153-193 157-198 (222)
148 d1nrjb_ c.37.1.8 (B:) Signal r 96.6 0.0006 4.4E-08 51.1 3.5 25 82-106 3-27 (209)
149 d2qtvb1 c.37.1.8 (B:24-189) SA 96.6 0.0006 4.3E-08 48.7 3.4 22 85-106 3-24 (166)
150 d2a5ja1 c.37.1.8 (A:9-181) Rab 96.6 0.00062 4.5E-08 49.6 3.3 22 85-106 6-27 (173)
151 d2bmfa2 c.37.1.14 (A:178-482) 96.6 0.006 4.4E-07 48.2 9.6 16 82-97 9-24 (305)
152 d1i2ma_ c.37.1.8 (A:) Ran {Hum 96.6 0.00069 5.1E-08 49.1 3.5 22 85-106 6-27 (170)
153 d3dhwc1 c.37.1.12 (C:1-240) Me 96.6 0.0005 3.6E-08 52.7 2.7 24 83-106 32-55 (240)
154 d2fh5b1 c.37.1.8 (B:63-269) Si 96.6 0.0007 5.1E-08 50.8 3.5 23 84-106 2-24 (207)
155 d1sq5a_ c.37.1.6 (A:) Pantothe 96.6 0.0014 1E-07 52.1 5.5 22 85-106 83-104 (308)
156 d1q0ua_ c.37.1.19 (A:) Probabl 96.6 0.0043 3.1E-07 46.4 8.1 39 155-193 147-186 (209)
157 d1pjra1 c.37.1.19 (A:1-318) DE 96.5 0.0018 1.3E-07 51.9 6.1 19 84-102 26-44 (318)
158 d2atxa1 c.37.1.8 (A:9-193) Rho 96.5 0.00025 1.8E-08 52.4 0.8 23 85-107 12-34 (185)
159 d3d31a2 c.37.1.12 (A:1-229) Su 96.5 0.00052 3.8E-08 52.2 2.6 43 154-196 144-189 (229)
160 d1t6na_ c.37.1.19 (A:) Spliceo 96.5 0.024 1.8E-06 42.1 11.9 41 153-193 143-185 (207)
161 d1uf9a_ c.37.1.1 (A:) Dephosph 96.5 0.00077 5.6E-08 49.8 3.2 20 85-104 6-25 (191)
162 d1uaaa1 c.37.1.19 (A:2-307) DE 96.5 0.0008 5.8E-08 53.6 3.5 19 83-101 15-33 (306)
163 d3raba_ c.37.1.8 (A:) Rab3a {R 96.5 0.00087 6.3E-08 48.5 3.4 22 85-106 8-29 (169)
164 d1ksha_ c.37.1.8 (A:) ADP-ribo 96.5 0.00076 5.5E-08 48.5 3.0 22 84-105 4-25 (165)
165 d1z0fa1 c.37.1.8 (A:8-173) Rab 96.5 0.00088 6.4E-08 48.3 3.4 22 85-106 7-28 (166)
166 d2atva1 c.37.1.8 (A:5-172) Ras 96.4 0.00097 7E-08 48.2 3.4 22 85-106 5-26 (168)
167 d1oxxk2 c.37.1.12 (K:1-242) Gl 96.4 0.00049 3.6E-08 52.8 1.8 25 82-106 31-55 (242)
168 d2vp4a1 c.37.1.1 (A:12-208) De 96.4 0.0004 2.9E-08 51.7 1.3 23 84-106 11-33 (197)
169 d1xbta1 c.37.1.24 (A:18-150) T 96.4 0.0056 4.1E-07 42.2 7.1 116 85-208 5-128 (133)
170 d1zd9a1 c.37.1.8 (A:18-181) AD 96.4 0.001 7.6E-08 47.8 3.4 24 84-107 4-27 (164)
171 d1z08a1 c.37.1.8 (A:17-183) Ra 96.4 0.0011 7.8E-08 47.9 3.4 22 85-106 6-27 (167)
172 d1r0wa_ c.37.1.12 (A:) Cystic 96.4 0.00095 6.9E-08 52.6 3.3 24 83-106 63-86 (281)
173 d1rifa_ c.37.1.23 (A:) DNA hel 96.4 0.0052 3.8E-07 48.3 7.7 41 63-106 112-152 (282)
174 d2ngra_ c.37.1.8 (A:) CDC42 {H 96.3 0.0004 2.9E-08 51.5 0.9 22 85-106 6-27 (191)
175 d1kkma_ c.91.1.2 (A:) HPr kina 96.3 0.0012 8.6E-08 47.9 3.4 22 84-105 16-37 (176)
176 d2f9la1 c.37.1.8 (A:8-182) Rab 96.3 0.0011 8.2E-08 48.2 3.3 22 85-106 7-28 (175)
177 d1g5ta_ c.37.1.11 (A:) ATP:cor 96.3 0.0017 1.2E-07 46.1 4.0 52 153-207 92-146 (157)
178 d2f7sa1 c.37.1.8 (A:5-190) Rab 96.3 0.0011 8E-08 48.7 3.2 21 85-105 8-28 (186)
179 d2ew1a1 c.37.1.8 (A:4-174) Rab 96.3 0.00099 7.2E-08 48.3 2.9 22 85-106 8-29 (171)
180 d1b0ua_ c.37.1.12 (A:) ATP-bin 96.3 0.0011 8.3E-08 51.4 3.3 25 82-106 28-52 (258)
181 d4tmka_ c.37.1.1 (A:) Thymidyl 96.3 0.0013 9.6E-08 49.4 3.6 24 84-107 4-27 (210)
182 d1ky3a_ c.37.1.8 (A:) Rab-rela 96.3 0.0013 9.3E-08 47.8 3.4 22 85-106 5-26 (175)
183 d2erxa1 c.37.1.8 (A:6-176) di- 96.3 0.0012 8.9E-08 47.7 3.3 22 85-106 5-26 (171)
184 d1nn5a_ c.37.1.1 (A:) Thymidyl 96.3 0.0014 1.1E-07 49.2 3.7 24 84-107 5-28 (209)
185 d1gsia_ c.37.1.1 (A:) Thymidyl 96.3 0.0014 1E-07 49.0 3.6 22 85-106 3-24 (208)
186 d2erya1 c.37.1.8 (A:10-180) r- 96.3 0.0011 7.9E-08 48.1 2.9 22 85-106 8-29 (171)
187 d1z06a1 c.37.1.8 (A:32-196) Ra 96.3 0.0014 9.9E-08 47.1 3.4 22 85-106 5-26 (165)
188 d1mkya1 c.37.1.8 (A:2-172) Pro 96.2 0.0014 9.9E-08 47.5 3.3 21 85-105 3-23 (171)
189 d1z0ja1 c.37.1.8 (A:2-168) Rab 96.2 0.0015 1.1E-07 47.1 3.4 23 85-107 7-29 (167)
190 d1a7ja_ c.37.1.6 (A:) Phosphor 96.2 0.00084 6.1E-08 52.8 2.1 26 81-106 3-28 (288)
191 d2i1qa2 c.37.1.11 (A:65-322) D 96.2 0.0012 9.1E-08 50.6 3.1 24 84-107 36-59 (258)
192 d1g16a_ c.37.1.8 (A:) Rab-rela 96.2 0.0013 9.3E-08 47.4 2.9 22 85-106 5-26 (166)
193 d1jjva_ c.37.1.1 (A:) Dephosph 96.2 0.0014 1E-07 49.0 3.2 19 85-103 5-23 (205)
194 d2g6ba1 c.37.1.8 (A:58-227) Ra 96.2 0.0016 1.2E-07 47.0 3.4 22 85-106 9-30 (170)
195 d1svia_ c.37.1.8 (A:) Probable 96.1 0.0014 1E-07 48.5 3.0 22 83-104 24-45 (195)
196 d2gjsa1 c.37.1.8 (A:91-258) Ra 96.1 0.0016 1.2E-07 47.0 3.3 21 85-105 4-24 (168)
197 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 96.1 0.0017 1.2E-07 47.6 3.4 22 85-106 5-26 (184)
198 d1hv8a1 c.37.1.19 (A:3-210) Pu 96.1 0.022 1.6E-06 42.3 9.9 41 153-193 143-184 (208)
199 d2b8ta1 c.37.1.24 (A:11-149) T 96.1 0.024 1.8E-06 39.1 9.4 35 155-192 79-113 (139)
200 d1u94a1 c.37.1.11 (A:6-268) Re 96.1 0.0035 2.6E-07 48.7 5.4 40 84-126 56-95 (263)
201 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 96.1 0.0017 1.3E-07 46.8 3.4 22 85-106 6-27 (170)
202 d1x3sa1 c.37.1.8 (A:2-178) Rab 96.1 0.0017 1.3E-07 47.2 3.4 22 85-106 10-31 (177)
203 d1vhta_ c.37.1.1 (A:) Dephosph 96.1 0.0019 1.4E-07 48.5 3.6 22 84-106 5-26 (208)
204 d1wmsa_ c.37.1.8 (A:) Rab9a {H 96.1 0.0019 1.3E-07 46.9 3.4 22 85-106 9-30 (174)
205 d1knxa2 c.91.1.2 (A:133-309) H 96.1 0.0013 9.1E-08 47.8 2.3 22 84-105 17-38 (177)
206 d1ko7a2 c.91.1.2 (A:130-298) H 96.1 0.0014 1E-07 47.3 2.5 22 84-105 17-38 (169)
207 d1tf7a1 c.37.1.11 (A:14-255) C 96.0 0.002 1.4E-07 49.0 3.5 22 84-105 28-49 (242)
208 d2g3ya1 c.37.1.8 (A:73-244) GT 96.0 0.002 1.4E-07 46.7 3.3 21 85-105 6-26 (172)
209 d1fzqa_ c.37.1.8 (A:) ADP-ribo 96.0 0.0015 1.1E-07 47.5 2.5 20 85-104 19-38 (176)
210 d1e0sa_ c.37.1.8 (A:) ADP-ribo 96.0 0.0018 1.3E-07 46.9 2.8 22 83-104 13-34 (173)
211 d2ocpa1 c.37.1.1 (A:37-277) De 96.0 0.0018 1.3E-07 49.7 2.9 25 83-107 3-27 (241)
212 d1tmka_ c.37.1.1 (A:) Thymidyl 95.9 0.0025 1.8E-07 48.0 3.7 26 81-106 2-27 (214)
213 d1x1ra1 c.37.1.8 (A:10-178) Ra 95.9 0.0024 1.8E-07 46.1 3.4 22 85-106 7-28 (169)
214 d1moza_ c.37.1.8 (A:) ADP-ribo 95.9 0.0018 1.3E-07 47.3 2.7 20 84-103 19-38 (182)
215 d2cxxa1 c.37.1.8 (A:2-185) GTP 95.9 0.0017 1.2E-07 47.4 2.5 22 84-105 2-23 (184)
216 d1nlfa_ c.37.1.11 (A:) Hexamer 95.8 0.0022 1.6E-07 50.1 3.1 23 84-106 31-53 (274)
217 d2bcgy1 c.37.1.8 (Y:3-196) GTP 95.8 0.0022 1.6E-07 47.4 2.9 22 85-106 9-30 (194)
218 d1p5zb_ c.37.1.1 (B:) Deoxycyt 95.8 0.00095 6.9E-08 51.2 0.6 23 84-106 4-26 (241)
219 d2fu5c1 c.37.1.8 (C:3-175) Rab 95.8 0.0015 1.1E-07 47.3 1.7 21 85-105 9-29 (173)
220 d1deka_ c.37.1.1 (A:) Deoxynuc 95.7 0.0029 2.1E-07 48.5 3.3 23 84-106 3-25 (241)
221 d1cr2a_ c.37.1.11 (A:) Gene 4 95.6 0.0037 2.7E-07 48.9 3.7 23 84-106 37-59 (277)
222 d1xx6a1 c.37.1.24 (A:2-142) Th 95.6 0.017 1.3E-06 40.0 6.8 22 85-106 10-31 (141)
223 d2dy1a2 c.37.1.8 (A:8-274) Elo 95.6 0.065 4.7E-06 41.3 10.9 24 83-106 3-26 (267)
224 d1ihua2 c.37.1.10 (A:308-586) 95.6 0.0069 5E-07 47.3 5.2 36 72-107 10-45 (279)
225 g1f2t.1 c.37.1.12 (A:,B:) Rad5 95.6 0.0043 3.1E-07 48.6 3.9 23 85-107 26-48 (292)
226 d1udxa2 c.37.1.8 (A:157-336) O 95.5 0.0027 1.9E-07 46.3 2.3 22 83-104 2-23 (180)
227 d1mo6a1 c.37.1.11 (A:1-269) Re 95.5 0.0098 7.2E-07 46.2 5.7 41 84-127 62-102 (269)
228 d1zcba2 c.37.1.8 (A:47-75,A:20 95.5 0.0036 2.6E-07 46.2 3.0 18 85-102 5-22 (200)
229 d1lnza2 c.37.1.8 (A:158-342) O 95.4 0.0033 2.4E-07 45.9 2.5 22 83-104 2-23 (185)
230 d1t9ha2 c.37.1.8 (A:68-298) Pr 95.4 0.00074 5.4E-08 51.3 -1.4 23 84-106 99-121 (231)
231 d2bmja1 c.37.1.8 (A:66-240) Ce 95.4 0.0054 3.9E-07 44.5 3.4 22 85-106 8-29 (175)
232 d1egaa1 c.37.1.8 (A:4-182) GTP 95.3 0.0046 3.3E-07 44.8 3.0 22 84-105 7-28 (179)
233 d1mkya2 c.37.1.8 (A:173-358) P 95.3 0.005 3.7E-07 44.9 3.2 22 84-105 10-31 (186)
234 d1oywa2 c.37.1.19 (A:1-206) Re 95.3 0.0062 4.5E-07 45.3 3.7 22 83-104 41-62 (206)
235 d1d0xa2 c.37.1.9 (A:2-33,A:80- 95.2 0.074 5.4E-06 47.1 11.2 60 47-106 88-149 (712)
236 d1h65a_ c.37.1.8 (A:) Chloropl 95.2 0.011 8.1E-07 45.7 5.1 35 71-105 19-55 (257)
237 d1puia_ c.37.1.8 (A:) Probable 95.2 0.0024 1.7E-07 46.6 1.1 23 82-104 16-38 (188)
238 d1azta2 c.37.1.8 (A:35-65,A:20 95.2 0.0053 3.9E-07 46.3 3.0 23 84-106 8-30 (221)
239 d1xp8a1 c.37.1.11 (A:15-282) R 95.1 0.013 9.2E-07 45.5 5.2 39 84-125 59-97 (268)
240 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 95.1 0.0055 4E-07 45.1 2.9 23 85-107 5-27 (200)
241 d1xzpa2 c.37.1.8 (A:212-371) T 95.0 0.0017 1.3E-07 46.2 -0.2 22 85-106 3-24 (160)
242 d1lkxa_ c.37.1.9 (A:) Myosin S 94.9 0.027 1.9E-06 49.8 7.4 60 47-106 49-110 (684)
243 d1xpua3 c.37.1.11 (A:129-417) 94.8 0.0086 6.3E-07 46.8 3.4 31 76-106 37-67 (289)
244 d2c78a3 c.37.1.8 (A:9-212) Elo 94.8 0.16 1.1E-05 37.3 10.5 23 84-106 5-27 (204)
245 g1xew.1 c.37.1.12 (X:,Y:) Smc 94.8 0.005 3.7E-07 49.3 2.1 22 85-106 29-50 (329)
246 d1nija1 c.37.1.10 (A:2-223) Hy 94.6 0.0058 4.2E-07 46.2 1.9 23 83-105 4-26 (222)
247 d1svsa1 c.37.1.8 (A:32-60,A:18 94.6 0.0093 6.8E-07 43.5 3.0 22 85-106 5-26 (195)
248 d1byia_ c.37.1.10 (A:) Dethiob 94.5 0.01 7.5E-07 44.3 3.1 24 84-107 3-27 (224)
249 d1ihua1 c.37.1.10 (A:1-296) Ar 94.5 0.015 1.1E-06 45.5 4.3 26 82-107 8-33 (296)
250 d1z63a1 c.37.1.19 (A:432-661) 94.5 0.042 3.1E-06 41.3 6.7 24 84-107 33-56 (230)
251 d1e9ra_ c.37.1.11 (A:) Bacteri 94.5 0.0092 6.7E-07 49.8 3.0 24 83-106 51-74 (433)
252 g1ii8.1 c.37.1.12 (A:,B:) Rad5 94.4 0.016 1.2E-06 46.3 4.3 23 84-106 25-47 (369)
253 d1br2a2 c.37.1.9 (A:80-789) My 94.4 0.043 3.1E-06 48.7 7.4 58 49-106 56-115 (710)
254 d2bv3a2 c.37.1.8 (A:7-282) Elo 94.4 0.049 3.6E-06 42.2 6.9 25 82-106 6-30 (276)
255 d1qhla_ c.37.1.12 (A:) Cell di 94.4 0.0028 2E-07 46.9 -0.5 23 85-107 27-49 (222)
256 d1p6xa_ c.37.1.1 (A:) Thymidin 94.3 0.0095 6.9E-07 47.8 2.6 22 85-106 9-30 (333)
257 d1w7ja2 c.37.1.9 (A:63-792) My 94.1 0.054 3.9E-06 48.2 7.3 57 50-106 60-118 (730)
258 d1g7sa4 c.37.1.8 (A:1-227) Ini 94.0 0.15 1.1E-05 38.1 8.8 24 83-106 6-29 (227)
259 d1e69a_ c.37.1.12 (A:) Smc hea 93.9 0.011 7.8E-07 46.8 2.0 22 84-105 26-47 (308)
260 d2mysa2 c.37.1.9 (A:4-33,A:80- 93.8 0.05 3.6E-06 48.9 6.7 55 52-106 91-147 (794)
261 d1kk8a2 c.37.1.9 (A:1-28,A:77- 93.8 0.052 3.8E-06 48.7 6.7 56 51-106 88-145 (789)
262 d1c9ka_ c.37.1.11 (A:) Adenosy 93.5 0.092 6.7E-06 37.8 6.4 20 85-104 2-21 (180)
263 d1osna_ c.37.1.1 (A:) Thymidin 93.2 0.014 9.9E-07 46.8 1.6 23 85-107 8-30 (331)
264 d1e2ka_ c.37.1.1 (A:) Thymidin 93.2 0.015 1.1E-06 46.5 1.7 22 85-106 7-28 (329)
265 d2jdid3 c.37.1.11 (D:82-357) C 93.1 0.025 1.8E-06 43.8 3.0 30 77-106 63-92 (276)
266 d1w1wa_ c.37.1.12 (A:) Smc hea 93.1 0.022 1.6E-06 46.9 3.0 22 85-106 28-49 (427)
267 d1n0ua2 c.37.1.8 (A:3-343) Elo 93.1 0.26 1.9E-05 39.2 9.3 25 82-106 17-41 (341)
268 d1wb1a4 c.37.1.8 (A:1-179) Elo 93.0 0.026 1.9E-06 40.8 2.8 21 84-104 7-27 (179)
269 d1d2ea3 c.37.1.8 (A:55-250) El 92.9 0.35 2.6E-05 35.1 9.1 23 84-106 5-27 (196)
270 d1g8fa3 c.37.1.15 (A:390-511) 92.9 0.04 2.9E-06 36.7 3.3 24 84-107 8-31 (122)
271 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 92.2 0.065 4.8E-06 46.5 4.9 23 84-106 26-49 (623)
272 d1cp2a_ c.37.1.10 (A:) Nitroge 92.2 0.041 3E-06 42.4 3.2 24 85-108 4-27 (269)
273 d1bg2a_ c.37.1.9 (A:) Kinesin 92.1 0.06 4.3E-06 42.9 4.1 29 72-100 66-94 (323)
274 d1tq4a_ c.37.1.8 (A:) Interfer 92.1 0.033 2.4E-06 45.8 2.6 22 83-104 57-78 (400)
275 d1jqlb_ c.37.1.20 (B:) delta s 91.8 0.95 6.9E-05 30.5 9.8 108 72-194 8-116 (140)
276 d1j3ba1 c.91.1.1 (A:212-529) P 91.5 0.031 2.3E-06 44.0 1.6 18 84-101 16-33 (318)
277 d1gkub1 c.37.1.16 (B:1-250) He 91.4 0.086 6.3E-06 39.7 4.2 24 83-106 59-82 (237)
278 d1t5la1 c.37.1.19 (A:2-414) Nu 91.3 0.16 1.2E-05 41.7 5.9 50 66-122 16-65 (413)
279 d2olra1 c.91.1.1 (A:228-540) P 91.2 0.045 3.3E-06 42.9 2.3 17 84-100 16-32 (313)
280 d2afhe1 c.37.1.10 (E:1-289) Ni 91.2 0.062 4.5E-06 41.9 3.2 23 85-107 5-27 (289)
281 d1ry6a_ c.37.1.9 (A:) Kinesin 91.2 0.072 5.3E-06 42.5 3.6 26 75-100 78-103 (330)
282 d1goja_ c.37.1.9 (A:) Kinesin 90.7 0.094 6.9E-06 42.2 3.9 27 73-99 71-97 (354)
283 d1c4oa1 c.37.1.19 (A:2-409) Nu 90.7 1.3 9.7E-05 35.9 11.1 48 66-120 13-60 (408)
284 d1ii2a1 c.91.1.1 (A:201-523) P 90.3 0.062 4.5E-06 42.3 2.3 18 84-101 16-33 (323)
285 d2jdia3 c.37.1.11 (A:95-379) C 90.2 0.08 5.9E-06 41.1 2.9 29 78-106 64-92 (285)
286 d2zfia1 c.37.1.9 (A:4-352) Kin 90.2 0.12 8.8E-06 41.5 4.1 29 71-99 76-104 (349)
287 d1x88a1 c.37.1.9 (A:18-362) Ki 90.2 0.1 7.4E-06 41.9 3.7 29 71-99 70-98 (345)
288 d1z3ix2 c.37.1.19 (X:92-389) R 90.0 0.87 6.3E-05 35.2 9.1 23 84-106 81-103 (298)
289 d1zunb3 c.37.1.8 (B:16-237) Su 88.9 3.2 0.00023 30.4 11.5 23 84-106 11-33 (222)
290 d1tafb_ a.22.1.3 (B:) TAF(II)6 88.8 0.81 5.9E-05 26.7 5.9 56 223-278 12-69 (70)
291 d1hyqa_ c.37.1.10 (A:) Cell di 88.7 0.16 1.1E-05 37.8 3.6 23 85-107 5-27 (232)
292 d1v8ka_ c.37.1.9 (A:) Kinesin 88.5 0.11 7.7E-06 42.1 2.6 28 73-100 105-132 (362)
293 d1sdma_ c.37.1.9 (A:) Kinesin 87.7 0.15 1.1E-05 41.1 3.1 27 73-99 66-92 (364)
294 d2ncda_ c.37.1.9 (A:) Kinesin 87.6 0.16 1.1E-05 41.1 3.1 27 73-99 116-142 (368)
295 d1fx0a3 c.37.1.11 (A:97-372) C 87.6 0.12 8.8E-06 39.9 2.3 26 80-105 65-90 (276)
296 d1f9va_ c.37.1.9 (A:) Kinesin 87.5 0.19 1.4E-05 40.2 3.5 26 75-100 76-101 (342)
297 d1g3qa_ c.37.1.10 (A:) Cell di 87.5 0.21 1.5E-05 37.2 3.6 23 85-107 5-28 (237)
298 d1f5na2 c.37.1.8 (A:7-283) Int 85.7 0.34 2.5E-05 37.3 4.0 39 63-105 15-55 (277)
299 d2akab1 c.37.1.8 (B:6-304) Dyn 85.4 0.46 3.3E-05 36.8 4.7 25 82-106 26-50 (299)
300 d1ys7a2 c.23.1.1 (A:7-127) Tra 85.0 1.8 0.00013 28.2 7.1 73 156-231 46-121 (121)
301 d1w36b1 c.37.1.19 (B:1-485) Ex 84.7 0.4 2.9E-05 39.7 4.3 27 80-106 14-41 (485)
302 d1f60a3 c.37.1.8 (A:2-240) Elo 84.5 1.3 9.8E-05 32.9 6.9 23 84-106 8-30 (239)
303 d1wgla_ a.5.2.4 (A:) Toll-inte 83.2 1.3 9.5E-05 24.9 4.7 39 218-260 11-49 (59)
304 g1f2t.1 c.37.1.12 (A:,B:) Rad5 82.8 1 7.6E-05 34.1 5.8 41 156-196 226-268 (292)
305 d1jnya3 c.37.1.8 (A:4-227) Elo 82.5 0.42 3E-05 35.4 3.1 23 84-106 5-27 (224)
306 d2qn6a3 c.37.1.8 (A:2-206) Ini 82.3 0.44 3.2E-05 34.7 3.2 21 84-104 10-30 (205)
307 d1jwyb_ c.37.1.8 (B:) Dynamin 82.3 0.38 2.8E-05 37.5 3.0 24 83-106 25-48 (306)
308 d1kk1a3 c.37.1.8 (A:6-200) Ini 82.0 0.44 3.2E-05 34.4 3.0 21 84-104 7-27 (195)
309 d1u0sy_ c.23.1.1 (Y:) CheY pro 81.9 2.5 0.00018 27.3 6.7 69 156-226 47-117 (118)
310 d1e69a_ c.37.1.12 (A:) Smc hea 81.3 1.5 0.00011 33.7 6.2 43 156-198 242-285 (308)
311 d1qkka_ c.23.1.1 (A:) Transcri 80.9 2.1 0.00015 28.7 6.2 74 155-230 44-119 (140)
312 d1f6va_ a.49.1.1 (A:) C-termin 80.8 0.32 2.4E-05 30.0 1.6 71 208-283 7-82 (91)
313 d1wrba1 c.37.1.19 (A:164-401) 80.8 0.43 3.1E-05 35.8 2.7 15 83-97 59-73 (238)
314 d1mn3a_ a.5.2.4 (A:) Vacuolar 79.8 2 0.00014 23.6 4.5 31 229-259 21-51 (54)
315 d2huec1 a.22.1.1 (C:20-101) Hi 79.3 1.4 0.0001 26.7 4.2 58 222-279 14-73 (82)
316 d1ni3a1 c.37.1.8 (A:11-306) Yc 78.6 0.58 4.2E-05 36.3 2.9 21 85-105 13-33 (296)
317 d1puja_ c.37.1.8 (A:) Probable 78.5 0.55 4E-05 35.9 2.7 21 85-105 115-135 (273)
318 d1fada_ a.77.1.2 (A:) FADD (Mo 78.5 4.6 0.00033 24.8 6.8 68 213-280 3-80 (95)
319 d1p2fa2 c.23.1.1 (A:1-120) Res 77.5 3.9 0.00028 26.4 6.6 72 156-230 44-118 (120)
320 d1wxqa1 c.37.1.8 (A:1-319) GTP 77.3 0.59 4.3E-05 36.6 2.6 21 85-105 3-23 (319)
321 d1htaa_ a.22.1.2 (A:) Archaeal 77.1 4.7 0.00034 23.1 6.3 62 214-279 4-67 (68)
322 d1r5ba3 c.37.1.8 (A:215-459) E 75.6 0.63 4.6E-05 35.0 2.2 23 84-106 26-48 (245)
323 d1jala1 c.37.1.8 (A:1-278) Ych 75.0 1 7.6E-05 34.4 3.4 21 85-105 5-25 (278)
324 d1ny5a1 c.23.1.1 (A:1-137) Tra 74.8 4.5 0.00033 26.8 6.4 71 156-229 45-118 (137)
325 d1jbea_ c.23.1.1 (A:) CheY pro 74.2 8.8 0.00064 24.9 8.2 74 155-231 49-127 (128)
326 d1krwa_ c.23.1.1 (A:) NTRC rec 72.8 2 0.00015 28.0 4.1 71 156-229 48-121 (123)
327 g1ii8.1 c.37.1.12 (A:,B:) Rad5 72.1 2.7 0.00019 32.4 5.4 40 157-196 304-345 (369)
328 d1kgsa2 c.23.1.1 (A:2-123) Pho 70.9 9 0.00066 24.5 7.1 72 156-230 46-120 (122)
329 d1p3da1 c.5.1.1 (A:11-106) UDP 69.8 6 0.00044 24.4 5.7 25 82-106 8-32 (96)
330 d2a9pa1 c.23.1.1 (A:2-118) DNA 68.6 4.5 0.00033 25.9 5.1 69 156-228 45-116 (117)
331 d1tafa_ a.22.1.3 (A:) TAF(II)4 67.6 8.6 0.00063 22.0 5.4 57 222-278 6-64 (68)
332 d1zesa1 c.23.1.1 (A:3-123) Pho 67.2 12 0.00088 23.8 7.1 71 155-228 44-119 (121)
333 d1peya_ c.23.1.1 (A:) Sporulat 66.1 7.6 0.00055 24.9 5.9 68 157-227 47-117 (119)
334 d1dbwa_ c.23.1.1 (A:) Transcri 66.1 9.1 0.00066 24.6 6.3 69 156-227 48-119 (123)
335 d1xhfa1 c.23.1.1 (A:2-122) Aer 65.7 8.6 0.00063 24.6 6.1 69 156-228 47-118 (121)
336 d1dz3a_ c.23.1.1 (A:) Sporulat 62.3 13 0.00091 23.9 6.4 70 157-228 49-121 (123)
337 d1w1wa_ c.37.1.12 (A:) Smc hea 61.7 5.4 0.00039 31.7 5.4 40 157-196 356-397 (427)
338 d1yioa2 c.23.1.1 (A:3-130) Res 60.5 18 0.0013 23.2 8.2 71 155-228 46-119 (128)
339 d1w25a1 c.23.1.1 (A:2-140) Res 58.5 21 0.0015 23.3 7.8 71 156-229 46-121 (139)
340 d1j6ua3 c.72.2.1 (A:89-295) UD 58.4 6 0.00044 28.1 4.6 34 72-107 4-37 (207)
341 d1zh2a1 c.23.1.1 (A:2-120) Tra 57.2 12 0.00088 23.8 5.6 71 156-230 45-118 (119)
342 d1kjwa2 c.37.1.1 (A:526-724) G 56.4 4.7 0.00034 28.8 3.6 22 82-106 9-30 (199)
343 d1k68a_ c.23.1.1 (A:) Response 56.1 23 0.0017 23.1 7.6 71 155-228 55-130 (140)
344 d2axpa1 c.37.1.1 (A:2-165) Hyp 54.6 9.3 0.00068 24.0 4.3 22 85-106 3-24 (164)
345 d1k66a_ c.23.1.1 (A:) Response 54.5 20 0.0014 23.8 6.6 72 155-229 62-138 (149)
346 d1wd5a_ c.61.1.1 (A:) Putative 54.3 32 0.0023 24.2 11.4 39 67-106 7-45 (208)
347 d1qo0d_ c.23.1.3 (D:) Positive 53.0 30 0.0022 23.6 9.1 72 154-228 50-123 (189)
348 d1vg5a_ a.5.2.1 (A:) Rhomboid 51.5 19 0.0014 20.8 5.4 27 231-257 38-64 (73)
349 d1i3ca_ c.23.1.1 (A:) Response 51.1 29 0.0021 22.7 7.6 72 155-229 56-132 (144)
350 d1ku5a_ a.22.1.2 (A:) Archaeal 50.9 17 0.0012 20.3 4.8 46 233-278 19-65 (66)
351 d1khba1 c.91.1.1 (A:260-622) C 50.6 2.7 0.0002 32.9 1.5 18 84-101 18-37 (363)
352 d1zgza1 c.23.1.1 (A:2-121) Tor 48.3 28 0.002 21.8 6.3 70 156-229 46-118 (120)
353 d2r25b1 c.23.1.1 (B:1087-1214) 46.5 20 0.0014 23.1 5.3 71 156-228 52-125 (128)
354 d1f1ea_ a.22.1.2 (A:) Archaeal 46.3 18 0.0013 24.3 5.1 60 223-282 85-146 (151)
355 d1w25a2 c.23.1.1 (A:141-293) R 45.9 37 0.0027 22.5 7.9 70 156-228 56-130 (153)
356 d1p6qa_ c.23.1.1 (A:) CheY pro 45.8 17 0.0013 23.3 5.0 70 156-228 52-126 (129)
357 d2b4aa1 c.23.1.1 (A:2-119) Hyp 45.6 24 0.0017 22.3 5.6 66 156-225 48-114 (118)
358 d2ayxa1 c.23.1.1 (A:817-949) S 45.4 24 0.0017 22.8 5.7 70 156-229 53-126 (133)
359 d2bwba1 a.5.2.1 (A:328-371) DS 44.2 18 0.0013 18.6 5.4 28 229-257 14-41 (44)
360 d1mb3a_ c.23.1.1 (A:) Cell div 43.8 30 0.0022 21.8 5.9 69 157-228 47-120 (123)
361 d1s8na_ c.23.1.1 (A:) Probable 43.5 30 0.0022 23.8 6.3 70 156-229 49-121 (190)
362 d1qzma_ c.37.1.20 (A:) ATPase 43.0 22 0.0016 21.6 4.8 68 214-281 3-93 (94)
363 d2gf5a1 a.77.1.2 (A:89-191) FA 42.3 33 0.0024 20.9 8.0 67 214-280 4-80 (103)
364 d2jfga3 c.72.2.1 (A:94-297) UD 40.7 19 0.0014 25.0 4.9 25 80-106 9-33 (204)
365 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 40.7 23 0.0017 18.7 5.9 31 228-259 16-46 (50)
366 d1h75a_ c.47.1.1 (A:) Glutared 40.6 29 0.0021 19.7 5.8 34 85-124 3-36 (76)
367 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 40.5 13 0.00092 22.5 3.2 22 84-105 3-24 (89)
368 d1a04a2 c.23.1.1 (A:5-142) Nit 39.9 43 0.0031 21.5 7.2 83 157-243 50-135 (138)
369 d2daha1 a.5.2.1 (A:8-48) Ubiqu 39.1 22 0.0016 17.9 3.8 30 229-259 11-40 (41)
370 d1fova_ c.47.1.1 (A:) Glutared 36.9 33 0.0024 19.7 4.8 35 84-124 2-36 (82)
371 d1b0ua_ c.37.1.12 (A:) ATP-bin 36.7 21 0.0015 26.4 4.6 51 155-206 167-219 (258)
372 d1l2ta_ c.37.1.12 (A:) MJ0796 36.3 38 0.0028 24.4 5.9 25 82-106 31-55 (230)
373 d3d31a2 c.37.1.12 (A:1-229) Su 34.9 39 0.0028 24.4 5.8 25 82-106 26-50 (229)
374 d1vdla_ a.5.2.1 (A:) Ubiquitin 34.8 38 0.0027 19.4 4.9 35 223-258 28-62 (80)
375 d2g3qa1 a.5.2.1 (A:1339-1381) 34.2 27 0.002 17.6 3.6 27 231-257 13-39 (43)
376 d1p3da3 c.72.2.1 (A:107-321) U 33.5 24 0.0018 24.7 4.5 21 84-106 14-34 (215)
377 d1pzga1 c.2.1.5 (A:14-163) Lac 33.4 42 0.0031 22.3 5.5 30 172-201 110-139 (154)
378 d1veja1 a.5.2.1 (A:8-68) 49314 33.4 27 0.002 19.3 3.5 28 229-257 31-58 (61)
379 d1rw1a_ c.47.1.12 (A:) Hypothe 33.2 18 0.0013 22.7 3.3 46 85-136 2-48 (114)
380 d1r7ha_ c.47.1.1 (A:) Glutared 32.4 39 0.0028 18.9 6.9 35 84-124 2-36 (74)
381 d3dhwc1 c.37.1.12 (C:1-240) Me 31.1 26 0.0019 25.5 4.2 42 155-196 158-202 (240)
382 g1xew.1 c.37.1.12 (X:,Y:) Smc 30.6 39 0.0028 25.3 5.5 40 157-196 248-288 (329)
383 d1j9ba_ c.47.1.12 (A:) Arsenat 30.6 62 0.0045 21.0 5.8 48 84-137 1-49 (138)
384 d1r0ka2 c.2.1.3 (A:3-126,A:265 30.5 17 0.0012 24.4 2.8 17 82-98 2-19 (150)
385 d1nkta3 c.37.1.19 (A:-15-225,A 30.0 5.9 0.00043 30.0 0.3 20 85-104 113-132 (288)
386 d1g2912 c.37.1.12 (1:1-240) Ma 29.0 35 0.0025 24.8 4.6 24 83-106 30-53 (240)
387 d2pl1a1 c.23.1.1 (A:1-119) Pho 28.7 62 0.0045 20.1 7.3 71 156-229 45-118 (119)
388 d1vega_ a.5.2.1 (A:) NEDD8 ult 28.3 51 0.0037 19.0 4.7 42 213-261 27-68 (83)
389 d1h3oa_ a.22.1.3 (A:) TAF(II)- 27.8 30 0.0022 18.2 2.9 38 215-252 4-42 (50)
390 d1oxxk2 c.37.1.12 (K:1-242) Gl 27.6 30 0.0022 25.3 4.0 42 155-196 158-202 (242)
391 d1dcfa_ c.23.1.2 (A:) Receiver 26.4 74 0.0054 20.2 7.9 73 156-228 51-128 (134)
392 d1o5za2 c.72.2.2 (A:-2-293) Fo 26.1 34 0.0025 25.5 4.3 21 84-106 45-65 (296)
393 d2gc6a2 c.72.2.2 (A:1-296) Fol 25.6 43 0.0031 24.9 4.8 23 83-107 40-62 (296)
394 d1ubdc4 g.37.1.1 (C:381-408) Y 24.9 5.5 0.0004 18.4 -0.4 7 90-96 7-13 (28)
395 d1e9ra_ c.37.1.11 (A:) Bacteri 24.2 34 0.0025 27.0 4.2 71 155-227 276-357 (433)
396 d1jmxa1 a.3.1.7 (A:2-85) Quino 23.5 62 0.0045 19.0 4.2 34 212-245 29-62 (84)
397 d1jfib_ a.22.1.3 (B:) Negative 23.4 90 0.0066 20.1 5.7 65 214-280 5-70 (135)
398 d1texa_ c.37.1.5 (A:) Stf0 sul 23.0 34 0.0025 23.9 3.7 26 81-106 2-27 (265)
399 d1uaaa1 c.37.1.19 (A:2-307) DE 22.8 32 0.0023 25.4 3.6 39 155-196 206-244 (306)
400 d1mvoa_ c.23.1.1 (A:) PhoP rec 22.5 83 0.0061 19.4 7.4 70 156-228 47-119 (121)
401 d2pt0a1 c.45.1.4 (A:34-346) My 22.2 72 0.0053 24.1 5.5 51 48-106 185-236 (313)
402 d2j01f1 c.22.1.1 (F:1-208) Rib 21.8 23 0.0017 25.2 2.3 85 157-248 122-208 (208)
403 d1gg4a1 c.59.1.1 (A:313-447) U 21.4 71 0.0052 20.4 4.7 35 157-192 13-47 (135)
404 d2gc6a1 c.59.1.2 (A:297-425) F 21.1 90 0.0066 19.3 5.4 49 158-208 13-65 (129)
405 d1vkja_ c.37.1.5 (A:) Heparan 20.9 29 0.0021 24.9 2.9 24 81-104 4-27 (258)
406 d2gxba1 a.4.5.19 (A:140-198) Z 20.5 7.5 0.00055 21.4 -0.5 15 92-106 12-26 (59)
407 d1r0wa_ c.37.1.12 (A:) Cystic 20.0 55 0.004 24.3 4.3 42 154-195 175-218 (281)
No 1
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.5e-37 Score=248.70 Aligned_cols=222 Identities=45% Similarity=0.715 Sum_probs=195.8
Q ss_pred CchhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch
Q 022641 48 SQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~ 127 (294)
..||+++|+|+.+++++|+++.+..|..|+..+..++++|+||||||||++|+.+++++.+.. ....++++++++..+.
T Consensus 2 ~~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~-~~~~~~~~n~~~~~~~ 80 (224)
T d1sxjb2 2 QLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRS-YADGVLELNASDDRGI 80 (224)
T ss_dssp CCCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGG-HHHHEEEECTTSCCSH
T ss_pred CCchHhHhCCCCHHHhcCCHHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHhccc-cccccccccccccCCc
Confidence 469999999999999999999999999999999999999999999999999999999985432 2345778888888888
Q ss_pred hHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhcccc
Q 022641 128 NVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCA 207 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~ 207 (294)
..+......+...... ....+..++||||+|.++...++.|+..++..+....++++++....+.+++++||.
T Consensus 81 ~~i~~~~~~~~~~~~~-------~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~ 153 (224)
T d1sxjb2 81 DVVRNQIKHFAQKKLH-------LPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCA 153 (224)
T ss_dssp HHHHTHHHHHHHBCCC-------CCTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSE
T ss_pred eehhhHHHHHHHhhcc-------CCCcceEEEEEecccccchhHHHHHhhhccccccceeeeeccCchhhhhhHHHHHHH
Confidence 7777766665543322 123456799999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHhCCCCChhhhhhhcc
Q 022641 208 KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSG 278 (294)
Q Consensus 208 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~~it~~~v~~~~~ 278 (294)
.+.|++|+.+++..++.+++.++++.+++++++.+++.++||+|.+++.|+.+... ...|+.+.|.+++.
T Consensus 154 ~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai~~Lq~~~~~-~~~i~~~~i~~~~d 223 (224)
T d1sxjb2 154 ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG-HGLVNADNVFKIVD 223 (224)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HSSBCHHHHHHHHT
T ss_pred HhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHHHHHHHHHHc-CCCcCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999987654 55799999988764
No 2
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.6e-37 Score=245.89 Aligned_cols=222 Identities=44% Similarity=0.763 Sum_probs=191.6
Q ss_pred chhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchh
Q 022641 49 QPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGIN 128 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (294)
.||+++|+|+.+++++|+++.++.|..|+..+..++++|+||||+|||++|+++++++.+... ...+.+.+.++..+..
T Consensus 2 ~pw~ekyrP~~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~-~~~~~e~~~~~~~~~~ 80 (227)
T d1sxjc2 2 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNY-SNMVLELNASDDRGID 80 (227)
T ss_dssp CCHHHHTCCSSGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSH-HHHEEEECTTSCCSHH
T ss_pred CchhhhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHhhcCCC-cceeEEecccccCCee
Confidence 599999999999999999999999999999999999999999999999999999999854322 2345667777766666
Q ss_pred HHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhccccE
Q 022641 129 VVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAK 208 (294)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~~ 208 (294)
.............. ....+..+++|||++.++...++.|+..++.......+++++|....+.+++++||..
T Consensus 81 ~~~~~~~~~~~~~~--------~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~ 152 (227)
T d1sxjc2 81 VVRNQIKDFASTRQ--------IFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTR 152 (227)
T ss_dssp HHHTHHHHHHHBCC--------SSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEE
T ss_pred eeecchhhcccccc--------ccCCCeEEEEEeccccchhhHHHHHHHHhhhcccceeeccccCcHHHhHHHHHHHHhh
Confidence 55544444333211 1223456999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh----CCCCChhhhhhhccc
Q 022641 209 FRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLF----GSSITSKDLISVSGY 279 (294)
Q Consensus 209 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~----~~~it~~~v~~~~~~ 279 (294)
+.|.+++.+++..++.+++..+++.+++++++.|++.++||+|.+++.|+.+..+. ...||.++|.+++|.
T Consensus 153 i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~Gd~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~~g~ 227 (227)
T d1sxjc2 153 FRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGA 227 (227)
T ss_dssp EECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTTC
T ss_pred hccccccccccccccccccccccccCCHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCCCCCeeCHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999887665 356999999999873
No 3
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.1e-35 Score=239.79 Aligned_cols=218 Identities=25% Similarity=0.390 Sum_probs=188.2
Q ss_pred hhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCc-EEEECCCCCCHHHHHHHHHHHhcCCCccC----------------
Q 022641 51 WVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPH-MLFYGPPGTGKTTTALAIAHQLFGPELYK---------------- 113 (294)
Q Consensus 51 ~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~-ill~Gp~G~GKT~la~~la~~~~~~~~~~---------------- 113 (294)
+.+||+|..|++++|++..++.|..++..++.++ ++|+||||+|||++|+.+++.+.+.....
T Consensus 2 ~~~KyrP~~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 2 LARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp HHHHTCCSSGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred chhhhCCCCHHHccChHHHHHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHHHHHHcC
Confidence 4689999999999999999999999999988777 89999999999999999999986543211
Q ss_pred --CcceeecCCCCcchhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEE
Q 022641 114 --SRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFI 191 (294)
Q Consensus 114 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~ 191 (294)
..+++++.++....+.++..+..+... ...++..++||||+|.++...++.|++.+++++....+|++
T Consensus 82 ~~~~~~~~~~~~~~~i~~ir~~~~~~~~~----------~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~ 151 (239)
T d1njfa_ 82 RFVDLIEIDAASRTKVEDTRDLLDNVQYA----------PARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLA 151 (239)
T ss_dssp CCTTEEEEETTCSSSHHHHHHHHHSCCCS----------CSSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEE
T ss_pred CCCeEEEecchhcCCHHHHHHHHHHHHhc----------cccCCCEEEEEECcccCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 134566666665666565544433211 12234579999999999999999999999999999999999
Q ss_pred ecCCcccchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHhCCCCChh
Q 022641 192 CNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSK 271 (294)
Q Consensus 192 ~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~~it~~ 271 (294)
||....+.+++.+||..+.|++++.+++..++.+++..++..+++++++.|+..++||+|.++++++.+.....+.|+.+
T Consensus 152 tn~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~Gd~R~ain~l~~~~~~~~~~I~~~ 231 (239)
T d1njfa_ 152 TTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQ 231 (239)
T ss_dssp ESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTTSBCHH
T ss_pred cCCccccChhHhhhhcccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888777889999
Q ss_pred hhhhhcc
Q 022641 272 DLISVSG 278 (294)
Q Consensus 272 ~v~~~~~ 278 (294)
+|.+++|
T Consensus 232 ~v~~~lg 238 (239)
T d1njfa_ 232 AVSAMLG 238 (239)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9999886
No 4
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=9.4e-37 Score=246.19 Aligned_cols=229 Identities=59% Similarity=0.976 Sum_probs=193.4
Q ss_pred hhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhH
Q 022641 50 PWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV 129 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (294)
||+++|+|..+++++|+++.++.|..|+..+..++++|+||||+|||++++++++++.+..........++.+...+...
T Consensus 1 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (237)
T d1sxjd2 1 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISI 80 (237)
T ss_dssp CHHHHTCCSSTTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHH
T ss_pred CcchhhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheeccccccchH
Confidence 89999999999999999999999999999999899999999999999999999999865555566677777777766655
Q ss_pred HHHHHHHHHhhhcccCcc--CCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhcccc
Q 022641 130 VRTKIKTFAAVAVGSGQR--RGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCA 207 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~ 207 (294)
....+............. .......+..++||||++.++....+.++..++.......+|++++....+.+++.+||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~ 160 (237)
T d1sxjd2 81 VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCS 160 (237)
T ss_dssp HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSE
T ss_pred HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCHHHHHHHhhccccccccccccccccccccccccccchhh
Confidence 555544433222111110 011123456699999999999999999999999988888899999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-----CCCCChhhhhhhcc
Q 022641 208 KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLF-----GSSITSKDLISVSG 278 (294)
Q Consensus 208 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-----~~~it~~~v~~~~~ 278 (294)
.+.|+|++.+++..+|.+++.++++.+++++++.|++.++||+|.+++.|++++... ++.||.++|++++|
T Consensus 161 ~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~g 236 (237)
T d1sxjd2 161 KFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 236 (237)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred hhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhchhcCCCCccCHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999876544 46699999998876
No 5
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=4.4e-36 Score=241.23 Aligned_cols=220 Identities=51% Similarity=0.873 Sum_probs=189.7
Q ss_pred CchhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch
Q 022641 48 SQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~ 127 (294)
.+||+++|+|..+++++|+++.++.|..|+..+..++++|+||||+|||++|+++++++.+.. ....++++++++..+.
T Consensus 11 ~~~w~~ky~P~~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~~-~~~~~~e~n~s~~~~~ 89 (231)
T d1iqpa2 11 EKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGEN-WRHNFLELNASDERGI 89 (231)
T ss_dssp TSCHHHHTCCCSTTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGGG-HHHHEEEEETTCHHHH
T ss_pred hchHHHHhCCCCHHHccCcHHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHHHhcc-cCCCeeEEecCcccch
Confidence 469999999999999999999999999999999999999999999999999999999985432 2346777888877666
Q ss_pred hHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhcccc
Q 022641 128 NVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCA 207 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~ 207 (294)
..++............. ..+..++++||++.+....++.|+..++.......+|+++|....+++++.+||.
T Consensus 90 ~~~~~~~~~~~~~~~~~--------~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~ 161 (231)
T d1iqpa2 90 NVIREKVKEFARTKPIG--------GASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCA 161 (231)
T ss_dssp HTTHHHHHHHHHSCCGG--------GCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEE
T ss_pred hHHHHHHHHHHhhhhcc--------CCCceEEeehhhhhcchhHHHHHhhhcccCCcceEEEeccCChhhchHhHhCccc
Confidence 55555444433222111 1345699999999999999999999999989999999999999999999999999
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHhCCCCChhhhhhhc
Q 022641 208 KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVS 277 (294)
Q Consensus 208 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~~it~~~v~~~~ 277 (294)
.+.+.+++..++..++++++..+++.+++++++.|++.++||+|.+++.|+.++.. ...||.++|..+.
T Consensus 162 ~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~gdiR~ai~~Lq~~~~~-~~~it~e~v~~v~ 230 (231)
T d1iqpa2 162 IFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAAL-DKKITDENVFMVA 230 (231)
T ss_dssp EEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHTT-CSEECHHHHHHHT
T ss_pred cccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHc-CCCcCHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999988765 5668998887653
No 6
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.98 E-value=3.2e-31 Score=215.43 Aligned_cols=213 Identities=35% Similarity=0.602 Sum_probs=160.0
Q ss_pred hhhhcCCCcchhhcccHHHHHHHHHHHHcCC-CCcEEEECCCCCCHHHHHHHHHHHhcCCCccCC---------------
Q 022641 51 WVEKYRPKQVKDVAHQEEVVRVLTNTLETAN-CPHMLFYGPPGTGKTTTALAIAHQLFGPELYKS--------------- 114 (294)
Q Consensus 51 ~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~-~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~--------------- 114 (294)
|.++|+|..+++++|++..+..|..++..+. .++++|+||||||||++|+++++++.+......
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccccccccccccchh
Confidence 8999999999999999999999999987664 457999999999999999999999854321111
Q ss_pred --------cceeecCCCCc--chhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcC
Q 022641 115 --------RVLELNASDDR--GINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSK 184 (294)
Q Consensus 115 --------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~ 184 (294)
....+...+.. ........+....................+..+++|||+|.++...++.|++.++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~ 160 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSK 160 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTT
T ss_pred hhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccccccchhhhcccccccc
Confidence 01111111111 11111222222111111111111122234567999999999999999999999999888
Q ss_pred cceEEEEecCCcccchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCCCC-HHHHHHHHhhccCcHHHHHHHHHHHHHH
Q 022641 185 VTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLD-AEALSTLSSISQGDLRRAITYLQGAARL 263 (294)
Q Consensus 185 ~~~ii~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~l~~~~~G~~r~~~~~l~~~~~~ 263 (294)
.+.+|++||....+++++.+||..++|+||+.+++.+++.+++..+++.++ +++++.|+..++||+|.+++.||.++..
T Consensus 161 ~~~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~~ 240 (252)
T d1sxje2 161 NIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALN 240 (252)
T ss_dssp TEEEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHHHHHHHTHHHHT
T ss_pred cccceeeeccccchhhhhhcchheeeecccchhhHHHHHHHHHHHcCCCCCcHHHHHHHHHHcCCcHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998764 7889999999999999999999988764
No 7
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.98 E-value=3.2e-31 Score=215.60 Aligned_cols=223 Identities=26% Similarity=0.407 Sum_probs=171.8
Q ss_pred hhhhhcCCCcchhhcccHHHHHHHHHHHHc-----------------CCCCcEEEECCCCCCHHHHHHHHHHHhcCCCcc
Q 022641 50 PWVEKYRPKQVKDVAHQEEVVRVLTNTLET-----------------ANCPHMLFYGPPGTGKTTTALAIAHQLFGPELY 112 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~-----------------~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~ 112 (294)
.|+++|+|..|++++|+++.++.|..|+.. +..++++|+||||||||++|+++|+++
T Consensus 3 lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~------ 76 (253)
T d1sxja2 3 LWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL------ 76 (253)
T ss_dssp CHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHT------
T ss_pred ccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHH------
Confidence 699999999999999999999999999853 233569999999999999999999998
Q ss_pred CCcceeecCCCCcchhHHHHHHHHHHhhhcccCc----cCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhh-cCcce
Q 022641 113 KSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQ----RRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETY-SKVTR 187 (294)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~-~~~~~ 187 (294)
+..++.++.++..+...+...+............ ........+..++++||++.+....+..+...++.. .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (253)
T d1sxja2 77 GYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTP 156 (253)
T ss_dssp TCEEEEECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHHHCSSC
T ss_pred HhhhhccccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccchhhhhHHHhhhhcccccc
Confidence 7788889988887776665544333222111110 112233456779999999998766555444444321 23334
Q ss_pred EEEEecC-CcccchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHhCC
Q 022641 188 FFFICNY-ISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGS 266 (294)
Q Consensus 188 ii~~~~~-~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~~~ 266 (294)
++++++. .....+.+.+||..+.|++|+.+++..++++++.++++.+++++++.|++.++||+|.+++.|++++.. .+
T Consensus 157 ii~i~~~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~GDiR~ai~~L~~~~~~-~~ 235 (253)
T d1sxja2 157 LILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTT-TK 235 (253)
T ss_dssp EEEEESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHHH-SS
T ss_pred cccccccccccccccccceeeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcHHHHHHHHHHHHHc-CC
Confidence 5555554 344566788999999999999999999999999999999999999999999999999999999987765 66
Q ss_pred CCChhhhhhhccc
Q 022641 267 SITSKDLISVSGY 279 (294)
Q Consensus 267 ~it~~~v~~~~~~ 279 (294)
.++.+.+.++...
T Consensus 236 ~i~~~~~~~~~~~ 248 (253)
T d1sxja2 236 TINHENINEISKA 248 (253)
T ss_dssp CCCTTHHHHHHHH
T ss_pred CCCHHHHHHHhch
Confidence 7898888776644
No 8
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.97 E-value=2.9e-29 Score=202.02 Aligned_cols=205 Identities=19% Similarity=0.259 Sum_probs=172.8
Q ss_pred hcCCCcchhhcccHHHHHHHHHHHHc-----CCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchh
Q 022641 54 KYRPKQVKDVAHQEEVVRVLTNTLET-----ANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGIN 128 (294)
Q Consensus 54 ~~~~~~~~~~~g~~~~~~~l~~~l~~-----~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (294)
-++|..|++++|++++++.|..|+.. ...++++|+||||||||++|+++++++ +..+..++++......
T Consensus 2 ~~RP~~~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~------~~~~~~~~~~~~~~~~ 75 (238)
T d1in4a2 2 FLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASEL------QTNIHVTSGPVLVKQG 75 (238)
T ss_dssp TTSCSSGGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHH------TCCEEEEETTTCCSHH
T ss_pred CCCCCcHHHcCChHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCcHHHHHHHHHhcc------CCCcccccCcccccHH
Confidence 46899999999999999999998853 245789999999999999999999999 7778888888877666
Q ss_pred HHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhc------------------CcceEEE
Q 022641 129 VVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYS------------------KVTRFFF 190 (294)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~------------------~~~~ii~ 190 (294)
.+...+... .++.++++||++.++...++.+...++... .++.+|+
T Consensus 76 ~~~~~~~~~----------------~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 139 (238)
T d1in4a2 76 DMAAILTSL----------------ERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVG 139 (238)
T ss_dssp HHHHHHHHC----------------CTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEE
T ss_pred HHHHHHHhh----------------ccCCchHHHHHHHhhhHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEE
Confidence 554433321 123599999999999998888888887532 3667899
Q ss_pred EecCCcccchHhhcccc-EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh----C
Q 022641 191 ICNYISRIIEPLASRCA-KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLF----G 265 (294)
Q Consensus 191 ~~~~~~~~~~~l~~r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~----~ 265 (294)
+||......+++++||. .+.|++++.+++..+++.++..++..+++++++.+++.++||+|.++++++.++..+ .
T Consensus 140 at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~gd~R~ai~~l~~~~~~~~~~~~ 219 (238)
T d1in4a2 140 ATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKA 219 (238)
T ss_dssp EESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred ecCCCccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999987 679999999999999999999999999999999999999999999999999765433 5
Q ss_pred CCCChhhhhhhcccc
Q 022641 266 SSITSKDLISVSGYP 280 (294)
Q Consensus 266 ~~it~~~v~~~~~~~ 280 (294)
..||.+.+.+++...
T Consensus 220 ~~it~~~~~~al~~l 234 (238)
T d1in4a2 220 DRINTDIVLKTMEVL 234 (238)
T ss_dssp SSBCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHhh
Confidence 579999998887643
No 9
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.96 E-value=2.4e-28 Score=196.67 Aligned_cols=204 Identities=21% Similarity=0.238 Sum_probs=166.6
Q ss_pred cCCCcchhhcccHHHHHHHHHHHHc-----CCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhH
Q 022641 55 YRPKQVKDVAHQEEVVRVLTNTLET-----ANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV 129 (294)
Q Consensus 55 ~~~~~~~~~~g~~~~~~~l~~~l~~-----~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (294)
++|++|++++|++++++.|..|+.. ...++++|+||||||||++|+++++++ ...+..++++.......
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~------~~~~~~~~~~~~~~~~~ 76 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL------GVNLRVTSGPAIEKPGD 76 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHH------TCCEEEEETTTCCSHHH
T ss_pred cCCCCHHHhCCHHHHHHHHHHHHHHHHhcCCCCCeEEEECCCCCCHHHHHHHHHHHh------CCCeEeccCCccccchh
Confidence 5799999999999999999988864 235789999999999999999999999 67778888777665544
Q ss_pred HHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhh------------------cCcceEEEE
Q 022641 130 VRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETY------------------SKVTRFFFI 191 (294)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~------------------~~~~~ii~~ 191 (294)
....+.... ....+++|||+|.++...++.++..++.. .....++++
T Consensus 77 ~~~~~~~~~---------------~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 141 (239)
T d1ixsb2 77 LAAILANSL---------------EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGA 141 (239)
T ss_dssp HHHHHHTTC---------------CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEE
T ss_pred hHHHHHhhc---------------cCCCeeeeecccccchhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEee
Confidence 433332211 12349999999999999999999988752 124557777
Q ss_pred ecCCcc-cchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh----CC
Q 022641 192 CNYISR-IIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLF----GS 266 (294)
Q Consensus 192 ~~~~~~-~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~----~~ 266 (294)
++.+.. ..+.+.++|..+.+.+++.+++..++.+++..+++.++++.+..+++.++||+|.++++++.+..++ .+
T Consensus 142 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~gd~R~a~~~l~~~~~~a~~~~~~ 221 (239)
T d1ixsb2 142 TTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEE 221 (239)
T ss_dssp ESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTSSHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccCcccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 766554 4556666788999999999999999999999999999999999999999999999999999887665 35
Q ss_pred CCChhhhhhhccc
Q 022641 267 SITSKDLISVSGY 279 (294)
Q Consensus 267 ~it~~~v~~~~~~ 279 (294)
.||.+.+.+++..
T Consensus 222 ~It~~~~~~~l~~ 234 (239)
T d1ixsb2 222 VITRERALEALAA 234 (239)
T ss_dssp CBCHHHHHHHHHH
T ss_pred CcCHHHHHHHHhh
Confidence 6999999988764
No 10
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=5.3e-26 Score=178.12 Aligned_cols=180 Identities=21% Similarity=0.299 Sum_probs=145.4
Q ss_pred cccHHHHHHHHHHHHcCCCCc-EEEECCCCCCHHHHHHHHHHHhcCCCccC------------------CcceeecCCC-
Q 022641 64 AHQEEVVRVLTNTLETANCPH-MLFYGPPGTGKTTTALAIAHQLFGPELYK------------------SRVLELNASD- 123 (294)
Q Consensus 64 ~g~~~~~~~l~~~l~~~~~~~-ill~Gp~G~GKT~la~~la~~~~~~~~~~------------------~~~~~~~~~~- 123 (294)
..++...+.|...+..++.++ ++|+||+|+|||++|+.+++.+.|..... ..+..+....
T Consensus 5 Pw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (207)
T d1a5ta2 5 PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKG 84 (207)
T ss_dssp GGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTT
T ss_pred cccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccccccchhhhhhc
Confidence 467788899999999999888 99999999999999999999997653221 1223332222
Q ss_pred --CcchhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchH
Q 022641 124 --DRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEP 201 (294)
Q Consensus 124 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~ 201 (294)
....+.++.....+.... ..++..++||||+|.++...++.|++.|++++.+..+|++|+....+.++
T Consensus 85 ~~~i~~~~ir~l~~~~~~~~----------~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~t 154 (207)
T d1a5ta2 85 KNTLGVDAVREVTEKLNEHA----------RLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLAT 154 (207)
T ss_dssp CSSBCHHHHHHHHHHTTSCC----------TTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHH
T ss_pred ccccccchhhHHhhhhhhcc----------ccCccceEEechhhhhhhhhhHHHHHHHHhhcccceeeeeecChhhhhhh
Confidence 233455555444332221 22456799999999999999999999999999999999999999999999
Q ss_pred hhccccEEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHH
Q 022641 202 LASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQ 258 (294)
Q Consensus 202 l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~ 258 (294)
+++||..+.|.+++.+++..++. +...+++++++.+++.++|++|.++++||
T Consensus 155 I~SRc~~i~~~~~~~~~~~~~L~-----~~~~~~~~~~~~i~~~s~Gs~r~al~~le 206 (207)
T d1a5ta2 155 LRSRCRLHYLAPPPEQYAVTWLS-----REVTMSQDALLAALRLSAGSPGAALALFQ 206 (207)
T ss_dssp HHTTSEEEECCCCCHHHHHHHHH-----HHCCCCHHHHHHHHHHTTTCHHHHHHTTS
T ss_pred hcceeEEEecCCCCHHHHHHHHH-----HcCCCCHHHHHHHHHHcCCCHHHHHHHhC
Confidence 99999999999999999998884 35678999999999999999999999875
No 11
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=7e-24 Score=170.48 Aligned_cols=203 Identities=19% Similarity=0.140 Sum_probs=145.3
Q ss_pred CCcchhhcccHHHHHHHHHHHH------------cCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCC
Q 022641 57 PKQVKDVAHQEEVVRVLTNTLE------------TANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDD 124 (294)
Q Consensus 57 ~~~~~~~~g~~~~~~~l~~~l~------------~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~ 124 (294)
..+|+++.|.++.++.|.+.+. ...+++++|+||||||||++|+++|+++ +.+++.+++++.
T Consensus 8 ~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~------~~~~~~i~~~~l 81 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEA------KVPFFTISGSDF 81 (256)
T ss_dssp CCCGGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHH------TCCEEEECSCSS
T ss_pred CCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHc------CCCEEEEEhHHh
Confidence 4578999999999988876542 1223459999999999999999999999 788888887765
Q ss_pred cc------hhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCC--------------HHHHHHHHHHHHhhc-
Q 022641 125 RG------INVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMT--------------EDAQNALRRTMETYS- 183 (294)
Q Consensus 125 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~--------------~~~~~~L~~~l~~~~- 183 (294)
.+ ...++..+...... .+.+|+|||+|.+. ....+.|+..++...
T Consensus 82 ~~~~~g~~~~~l~~~f~~A~~~--------------~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~ 147 (256)
T d1lv7a_ 82 VEMFVGVGASRVRDMFEQAKKA--------------APCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG 147 (256)
T ss_dssp TTSCCCCCHHHHHHHHHHHHTT--------------CSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS
T ss_pred hhcchhHHHHHHHHHHHHHHHc--------------CCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC
Confidence 33 33344444433221 23599999998752 123456777777433
Q ss_pred -CcceEEEEecCCcccchHhhc--ccc-EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccC-cHHHHHHHHH
Q 022641 184 -KVTRFFFICNYISRIIEPLAS--RCA-KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQG-DLRRAITYLQ 258 (294)
Q Consensus 184 -~~~~ii~~~~~~~~~~~~l~~--r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G-~~r~~~~~l~ 258 (294)
..+.+|.+||.+..+++++++ ||. .+.|++|+.+++..+++.++.+..+. .+..+..+++.+.| +.+.+.++++
T Consensus 148 ~~~v~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adi~~l~~ 226 (256)
T d1lv7a_ 148 NEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANLVN 226 (256)
T ss_dssp SSCEEEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcC-cccCHHHHHHhCCCCCHHHHHHHHH
Confidence 456778899999999999986 886 89999999999999999888654443 34457788888765 3444444454
Q ss_pred HHHHHh----CCCCChhhhhhhcccc
Q 022641 259 GAARLF----GSSITSKDLISVSGYP 280 (294)
Q Consensus 259 ~~~~~~----~~~it~~~v~~~~~~~ 280 (294)
.++..+ ...|+.+++..++..+
T Consensus 227 ~A~~~a~~~~~~~i~~~d~~~Al~rv 252 (256)
T d1lv7a_ 227 EAALFAARGNKRVVSMVEFEKAKDKI 252 (256)
T ss_dssp HHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 443322 4569999999887654
No 12
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.91 E-value=3.1e-24 Score=171.95 Aligned_cols=203 Identities=22% Similarity=0.220 Sum_probs=139.5
Q ss_pred CcchhhcccHHHHHHHHHHHH------------cCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCc
Q 022641 58 KQVKDVAHQEEVVRVLTNTLE------------TANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDR 125 (294)
Q Consensus 58 ~~~~~~~g~~~~~~~l~~~l~------------~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~ 125 (294)
.+|++++|.+++++.|.+.+. ...+.+++|+||||||||++|+++++++ +.+++.+++++..
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~------~~~~~~i~~~~l~ 79 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA------RVPFITASGSDFV 79 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHT------TCCEEEEEHHHHH
T ss_pred CcHHHHccHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHc------CCCEEEEEhHHhh
Confidence 478999999999888766541 1223459999999999999999999998 7888888765532
Q ss_pred ch--hHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCH--------------HHHHHHHHHHHhhc--Ccce
Q 022641 126 GI--NVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTE--------------DAQNALRRTMETYS--KVTR 187 (294)
Q Consensus 126 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~--------------~~~~~L~~~l~~~~--~~~~ 187 (294)
+. ......+..+..... ...+.||+|||+|.+.. ...+.|+..++... ..+.
T Consensus 80 ~~~~g~~~~~l~~~f~~a~----------~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vi 149 (247)
T d1ixza_ 80 EMFVGVGAARVRDLFETAK----------RHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIV 149 (247)
T ss_dssp HSCTTHHHHHHHHHHHHHT----------TSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEE
T ss_pred hccccHHHHHHHHHHHHHH----------HcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEE
Confidence 21 111122222221111 11246999999987621 13556777777543 3455
Q ss_pred EEEEecCCcccchHhhc--ccc-EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccC----cHHHHHHHHHHH
Q 022641 188 FFFICNYISRIIEPLAS--RCA-KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQG----DLRRAITYLQGA 260 (294)
Q Consensus 188 ii~~~~~~~~~~~~l~~--r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G----~~r~~~~~l~~~ 260 (294)
+|.+||.+..+++++++ ||. .|+|++|+.+++..+++.++...... .+..+..+++.+.| |++.+++.....
T Consensus 150 vi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~-~~~~~~~la~~t~g~s~~di~~lv~~A~l~ 228 (247)
T d1ixza_ 150 VMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLA-EDVDLALLAKRTPGFVGADLENLLNEAALL 228 (247)
T ss_dssp EEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBC-TTCCHHHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCccccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCc-cccCHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 67789999999999984 887 89999999999999999888654433 33457888888776 555555433322
Q ss_pred HHHh-CCCCChhhhhhhc
Q 022641 261 ARLF-GSSITSKDLISVS 277 (294)
Q Consensus 261 ~~~~-~~~it~~~v~~~~ 277 (294)
+... .+.|+.+++.+++
T Consensus 229 a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 229 AAREGRRKITMKDLEEAA 246 (247)
T ss_dssp HHHTTCSSBCHHHHHHHT
T ss_pred HHHcCCCCcCHHHHHHhh
Confidence 2222 5679999998875
No 13
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=1.7e-21 Score=157.44 Aligned_cols=176 Identities=20% Similarity=0.207 Sum_probs=124.5
Q ss_pred cchhhcccHHHHHHHHHHHHc-----------C--CCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCc
Q 022641 59 QVKDVAHQEEVVRVLTNTLET-----------A--NCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDR 125 (294)
Q Consensus 59 ~~~~~~g~~~~~~~l~~~l~~-----------~--~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~ 125 (294)
.|+++.|.++.++.|.+.+.. + .++.++|+||||||||++++++++++ +.+++.++++...
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~------~~~~~~i~~~~l~ 75 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET------GAFFFLINGPEIM 75 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHT------TCEEEEECHHHHT
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHh------CCeEEEEEchhhc
Confidence 588999999999888887521 1 23469999999999999999999998 7778877754322
Q ss_pred c------hhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHH-----------HHHHHHHHHHh--hcCcc
Q 022641 126 G------INVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTED-----------AQNALRRTMET--YSKVT 186 (294)
Q Consensus 126 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~-----------~~~~L~~~l~~--~~~~~ 186 (294)
+ ...++..+...... .+.+|+|||+|.+... ....++..+.. ....+
T Consensus 76 ~~~~g~~~~~l~~~f~~A~~~--------------~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~v 141 (258)
T d1e32a2 76 SKLAGESESNLRKAFEEAEKN--------------APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV 141 (258)
T ss_dssp TSCTTHHHHHHHHHHHHHHHT--------------CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCE
T ss_pred ccccccHHHHHHHHHHHHHhc--------------CCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCc
Confidence 1 22333333332221 2459999999998422 23444444443 23446
Q ss_pred eEEEEecCCcccchHhhc--ccc-EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccC----cHHHHHH
Q 022641 187 RFFFICNYISRIIEPLAS--RCA-KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQG----DLRRAIT 255 (294)
Q Consensus 187 ~ii~~~~~~~~~~~~l~~--r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G----~~r~~~~ 255 (294)
.+|++||.+..+++++++ ||. .|.+++|+.+++..+++.+++...+. ++..+..|++.|.| |++.+++
T Consensus 142 lvi~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~-~~~~~~~la~~t~G~s~adl~~lv~ 216 (258)
T d1e32a2 142 IVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLA-DDVDLEQVANETHGHVGADLAALCS 216 (258)
T ss_dssp EEEEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBC-TTCCHHHHHHHCTTCCHHHHHHHHH
T ss_pred cEEEeCCCccccchhhhhcccccceeECCCCCHHHHHHHhhhhccCcccc-cccchhhhhhcccCCCHHHHHHHHH
Confidence 678899999999999987 887 89999999999999999888643332 22347888888766 5555544
No 14
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.85 E-value=6.6e-20 Score=149.56 Aligned_cols=228 Identities=18% Similarity=0.206 Sum_probs=151.0
Q ss_pred CchhhhhcCCCcchhhcccHHHHHHHHHHHHc------CCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecC
Q 022641 48 SQPWVEKYRPKQVKDVAHQEEVVRVLTNTLET------ANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNA 121 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~------~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~ 121 (294)
.-++.+.|.|. .++|++..++.+.+++.. ...++++|+||||||||++++.+++.+.... ...++.+++
T Consensus 6 ~~~l~~~y~p~---~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~--~~~~~~~~~ 80 (276)
T d1fnna2 6 DSVFSPSYVPK---RLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKT--TARFVYING 80 (276)
T ss_dssp GGGGSTTCCCS---CCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSC--CCEEEEEET
T ss_pred cccCCCCCCCC---CCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhccc--CCcEEEecc
Confidence 34667778775 458998888888887753 2335799999999999999999999984322 334444554
Q ss_pred CCCcchhHHHHHHHHHHhhhcccCccC----------CCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHh----hcCcce
Q 022641 122 SDDRGINVVRTKIKTFAAVAVGSGQRR----------GGYPCPPYKIIILDEADSMTEDAQNALRRTMET----YSKVTR 187 (294)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~----~~~~~~ 187 (294)
........................... .........++++|+++.+.......+...+.. ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T d1fnna2 81 FIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIA 160 (276)
T ss_dssp TTCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEE
T ss_pred hhhhhhhhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhhhhhhhhHHHHHhccccccccceE
Confidence 443332222111111000000000000 000112345889999999987766655544432 223455
Q ss_pred EEEEecCC---cccchHhhcccc--EEEecCCCHHHHHHHHHHHHHHhC--CCCCHHHHHHHHhh---------ccCcHH
Q 022641 188 FFFICNYI---SRIIEPLASRCA--KFRFKPLSEEVMSSRVLHICNEEG--LNLDAEALSTLSSI---------SQGDLR 251 (294)
Q Consensus 188 ii~~~~~~---~~~~~~l~~r~~--~i~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~l~~l~~~---------~~G~~r 251 (294)
+|++++.. ..+.+.+.+|+. .+.|+|++.+++.+++++++.... ..+++++++.+++. +.||+|
T Consensus 161 ~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G~~R 240 (276)
T d1fnna2 161 LVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDAR 240 (276)
T ss_dssp EEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHH
T ss_pred EeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhhcCCCHH
Confidence 66777654 346677878764 699999999999999999887633 34899999998875 479999
Q ss_pred HHHHHHHHHHHHh----CCCCChhhhhhhcccc
Q 022641 252 RAITYLQGAARLF----GSSITSKDLISVSGYP 280 (294)
Q Consensus 252 ~~~~~l~~~~~~~----~~~it~~~v~~~~~~~ 280 (294)
.++++++.+...+ ...|+.+||+++..+.
T Consensus 241 ~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 241 LAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEV 273 (276)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 9999999887766 4579999999987653
No 15
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.83 E-value=4.1e-20 Score=142.74 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=114.2
Q ss_pred HHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCC-CcchhHHHHHHHHHHhhhcccCcc
Q 022641 69 VVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASD-DRGINVVRTKIKTFAAVAVGSGQR 147 (294)
Q Consensus 69 ~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 147 (294)
.++-+.+++..+..++++|+||+|+|||++|..+++........+..++.+.+.. ..+.+.+++....+...+
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~IR~i~~~~~~~~------ 75 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSP------ 75 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCC------
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHHHHHHHHHhhCc------
Confidence 3567788888888889999999999999999999998755555556777777643 346788887555543322
Q ss_pred CCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhccccEEEecCCCH
Q 022641 148 RGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSE 216 (294)
Q Consensus 148 ~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~~i~~~~~~~ 216 (294)
..+++.++||||+|.|+..+++.|++.||+++..+.+|++|+.+..+.+++++||+.+.|++|..
T Consensus 76 ----~~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p~~ 140 (198)
T d2gnoa2 76 ----ELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVPKE 140 (198)
T ss_dssp ----SSSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCCHH
T ss_pred ----ccCCCEEEEEeCccccchhhhhHHHHHHhCCCCCceeeeccCChhhCHHHHhcceEEEeCCCchH
Confidence 12456799999999999999999999999999999999999999999999999999999987753
No 16
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.83 E-value=2.5e-19 Score=143.50 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=161.6
Q ss_pred CCchhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCC----CccCCcceeecCC
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGP----ELYKSRVLELNAS 122 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~----~~~~~~~~~~~~~ 122 (294)
.+..+.++-+...++.++|++..++.+.+.|......|++|+||||+|||+++..+++..... ...+..++.++.+
T Consensus 4 ~~~dlt~~a~~~~ld~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~ 83 (268)
T d1r6bx2 4 FTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 83 (268)
T ss_dssp SSCBHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC
T ss_pred HhHHHHHHHHcCCCCcccChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeec
Confidence 445566666666777899999999999999999888999999999999999999999987421 2334567777654
Q ss_pred CCc----chhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCC---------HHHHHHHHHHHHhhcCcceEE
Q 022641 123 DDR----GINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMT---------EDAQNALRRTMETYSKVTRFF 189 (294)
Q Consensus 123 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~---------~~~~~~L~~~l~~~~~~~~ii 189 (294)
... ....+...+..+...... .+..++||||+|.+- .+..+.|...+.. ....+|
T Consensus 84 ~liag~~~~g~~e~r~~~i~~~~~~----------~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~r--g~i~vI 151 (268)
T d1r6bx2 84 SLLAGTKYRGDFEKRFKALLKQLEQ----------DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS--GKIRVI 151 (268)
T ss_dssp ---CCCCCSSCHHHHHHHHHHHHSS----------SSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSS--CCCEEE
T ss_pred hHhccCccchhHHHHHHHHHHHhhc----------cCCceEEecchHHHhcCCCCCCccccHHHHhhHHHhC--CCCeEE
Confidence 432 234455555544443321 224599999999882 2345566666653 566777
Q ss_pred EEecC-----CcccchHhhccccEEEecCCCHHHHHHHHHHHH----HHhCCCCCHHHHHHHHhhcc------CcHHHHH
Q 022641 190 FICNY-----ISRIIEPLASRCAKFRFKPLSEEVMSSRVLHIC----NEEGLNLDAEALSTLSSISQ------GDLRRAI 254 (294)
Q Consensus 190 ~~~~~-----~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~l~~l~~~~~------G~~r~~~ 254 (294)
.+|+. ....+++|.+||..|.+.+|+.++...+++.+. ..+++.++++++..+++++. .-|..++
T Consensus 152 gatT~eey~~~~e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAI 231 (268)
T d1r6bx2 152 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 231 (268)
T ss_dssp EEECHHHHHCCCCCTTSSGGGEEEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHH
T ss_pred EeCCHHHHHHHHhhcHHHHhhhcccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHH
Confidence 77753 234578899999999999999999999998755 45789999999999887743 4699999
Q ss_pred HHHHHHHHHh--------CCCCChhhhhhhccc
Q 022641 255 TYLQGAARLF--------GSSITSKDLISVSGY 279 (294)
Q Consensus 255 ~~l~~~~~~~--------~~~it~~~v~~~~~~ 279 (294)
.++..++... ...++.+++..++..
T Consensus 232 dllDea~a~~~~~~~~~~~~~i~~~di~~~i~~ 264 (268)
T d1r6bx2 232 DVIDEAGARARLMPVSKRKKTVNVADIESVVAR 264 (268)
T ss_dssp HHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccCcccCCHHHHHHHHHH
Confidence 9999887654 234788888776654
No 17
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.81 E-value=6.3e-19 Score=137.78 Aligned_cols=186 Identities=17% Similarity=0.208 Sum_probs=126.0
Q ss_pred cchhhc-c--cHHHHHHHHHHHHcCCCC--cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch--hHH-
Q 022641 59 QVKDVA-H--QEEVVRVLTNTLETANCP--HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI--NVV- 130 (294)
Q Consensus 59 ~~~~~~-g--~~~~~~~l~~~l~~~~~~--~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 130 (294)
+|++++ | ++.+...+..+....+.. .++|+||+|||||||+.++++++... +..++.++..+.... ..+
T Consensus 8 tFdnF~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 84 (213)
T d1l8qa2 8 TLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR---GYRVIYSSADDFAQAMVEHLK 84 (213)
T ss_dssp CSSSCCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHT---TCCEEEEEHHHHHHHHHHHHH
T ss_pred ChhhccCCCcHHHHHHHHHHHHhCcCCCCCcEEEECCCCCcHHHHHHHHHHHhccC---ccceEEechHHHHHHHHHHHH
Confidence 566654 4 566667777777654432 39999999999999999999998432 123333332221100 000
Q ss_pred HHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCC--HHHHHHHHHHHHhhc-CcceEEEEecCCc----ccchHhh
Q 022641 131 RTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMT--EDAQNALRRTMETYS-KVTRFFFICNYIS----RIIEPLA 203 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~--~~~~~~L~~~l~~~~-~~~~ii~~~~~~~----~~~~~l~ 203 (294)
......+.... ...++|+|||+|.+. +..+..|+.+++... ....+|++++.+. ...+.+.
T Consensus 85 ~~~~~~~~~~~------------~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~ 152 (213)
T d1l8qa2 85 KGTINEFRNMY------------KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLV 152 (213)
T ss_dssp HTCHHHHHHHH------------HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHH
T ss_pred ccchhhHHHHH------------hhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchhccccchHHH
Confidence 00001111111 012599999999985 556777888887644 4566777776543 2467888
Q ss_pred cccc---EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHH
Q 022641 204 SRCA---KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAA 261 (294)
Q Consensus 204 ~r~~---~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~ 261 (294)
+|+. .+.++ |+.+++..++++.+...|+.++++++++|++.+ .++|.+...+...+
T Consensus 153 SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~-~~~R~L~~~l~~l~ 211 (213)
T d1l8qa2 153 SRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLIK 211 (213)
T ss_dssp HHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-SSHHHHHHHHHHHH
T ss_pred HHhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhc-CcHHHHHHHHHHhh
Confidence 8876 77885 577889999999999999999999999999998 57998877776654
No 18
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.81 E-value=4.1e-19 Score=145.60 Aligned_cols=230 Identities=18% Similarity=0.182 Sum_probs=140.8
Q ss_pred CCchhhhhcCCCcchhhcccHHHHHHHHHHH----HcCCCC-----cEEEECCCCCCHHHHHHHHHHHhcCC---CccCC
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTL----ETANCP-----HMLFYGPPGTGKTTTALAIAHQLFGP---ELYKS 114 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l----~~~~~~-----~ill~Gp~G~GKT~la~~la~~~~~~---~~~~~ 114 (294)
...++..+|.|. .+.|++..++.|..++ ..+..+ +++|+||||||||++++++++.+... .....
T Consensus 5 ~~~~l~~~~~P~---~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~ 81 (287)
T d1w5sa2 5 DRRVFDENYIPP---ELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTV 81 (287)
T ss_dssp CGGGGSTTCCCS---SCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred ChhhcCCccCCC---CCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCc
Confidence 344677888885 4567666666665544 333322 25678999999999999999987321 11122
Q ss_pred cceeecCCCCcchhHHHHHHHHHHhhhcc-cCccC---------CCCCCCCcEEEEEeCCCCCC------HHHHHHHHHH
Q 022641 115 RVLELNASDDRGINVVRTKIKTFAAVAVG-SGQRR---------GGYPCPPYKIIILDEADSMT------EDAQNALRRT 178 (294)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~lliiDei~~l~------~~~~~~L~~~ 178 (294)
.+..+++...................... .+... .........++++||++.+. ......+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l 161 (287)
T d1w5sa2 82 KQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRV 161 (287)
T ss_dssp EEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTH
T ss_pred eeeeeccccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccchhHHHHHHHH
Confidence 33334433332222111111110000000 00000 00001234588999998762 3444555555
Q ss_pred HHhhc-----CcceEEEEecCCc------ccchHhhccc-cEEEecCCCHHHHHHHHHHHHHHhC--CCCCHHHHHHHHh
Q 022641 179 METYS-----KVTRFFFICNYIS------RIIEPLASRC-AKFRFKPLSEEVMSSRVLHICNEEG--LNLDAEALSTLSS 244 (294)
Q Consensus 179 l~~~~-----~~~~ii~~~~~~~------~~~~~l~~r~-~~i~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~l~~l~~ 244 (294)
++... ....+|++++... ...+++.+|+ ..+.|+|++.+++.+++..+++... ..+++++++.+++
T Consensus 162 ~~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~ 241 (287)
T d1w5sa2 162 HEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISD 241 (287)
T ss_dssp HHHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHH
T ss_pred HHhcchhhcccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHH
Confidence 54322 3445666665443 2345666665 4899999999999999999987643 3489999999998
Q ss_pred hc------cCcHHHHHHHHHHHHHHh----CCCCChhhhhhhccc
Q 022641 245 IS------QGDLRRAITYLQGAARLF----GSSITSKDLISVSGY 279 (294)
Q Consensus 245 ~~------~G~~r~~~~~l~~~~~~~----~~~it~~~v~~~~~~ 279 (294)
.+ .||+|.++++|+.++..+ ...||.++|++++.+
T Consensus 242 ~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 242 VYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 65 699999999999888766 467999999988754
No 19
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=6.6e-21 Score=154.35 Aligned_cols=176 Identities=20% Similarity=0.236 Sum_probs=116.3
Q ss_pred cchhhcccHHHHHHHHHHHHc-----------C--CCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCc
Q 022641 59 QVKDVAHQEEVVRVLTNTLET-----------A--NCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDR 125 (294)
Q Consensus 59 ~~~~~~g~~~~~~~l~~~l~~-----------~--~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~ 125 (294)
+|+++.|.++.++.|.+.+.. + ...+++|+||||||||++++++|.++ +.+++.+++++..
T Consensus 5 ~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~------~~~~~~~~~~~l~ 78 (265)
T d1r7ra3 5 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC------QANFISIKGPELL 78 (265)
T ss_dssp SCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHT------TCEEEEECHHHHH
T ss_pred CHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHh------CCcEEEEEHHHhh
Confidence 788888888777766665421 2 23469999999999999999999999 7788877754321
Q ss_pred ------chhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHH--------------HHHHHHHHHHhh--c
Q 022641 126 ------GINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTED--------------AQNALRRTMETY--S 183 (294)
Q Consensus 126 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~--------------~~~~L~~~l~~~--~ 183 (294)
....++..+...... .+.+|+|||+|.+... ..+.|+..++.. .
T Consensus 79 ~~~~~~~~~~l~~~f~~A~~~--------------~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~ 144 (265)
T d1r7ra3 79 TMWFGESEANVREIFDKARQA--------------APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK 144 (265)
T ss_dssp TSCTTTHHHHHHHHHHHHHHT--------------CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC-----
T ss_pred hccccchHHHHHHHHHHHHhc--------------CCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCC
Confidence 123333333332222 2359999999987421 234455555432 2
Q ss_pred CcceEEEEecCCcccchHhhc--ccc-EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhcc----CcHHHHHH
Q 022641 184 KVTRFFFICNYISRIIEPLAS--RCA-KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQ----GDLRRAIT 255 (294)
Q Consensus 184 ~~~~ii~~~~~~~~~~~~l~~--r~~-~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~----G~~r~~~~ 255 (294)
.++.+|++||.+..+++++++ ||. .|.+++|+.+++.++++.+++..... .+..+..|++.+. +|+..+++
T Consensus 145 ~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~-~~~~l~~la~~t~g~s~~di~~lv~ 222 (265)
T d1r7ra3 145 KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA-KDVDLEFLAKMTNGFSGADLTEICQ 222 (265)
T ss_dssp -CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC-----CCCCHHHHHHHCSSCCHHHHHHHH
T ss_pred CCEEEEEeCCCchhCCHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCch-hhhhHHHHHhcCCCCCHHHHHHHHH
Confidence 346788889999999999986 787 89999999999999998776532221 1223566666654 45554443
No 20
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.75 E-value=7.2e-18 Score=142.33 Aligned_cols=207 Identities=17% Similarity=0.177 Sum_probs=143.8
Q ss_pred CCchhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcC----CCccCCcceeecCC
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG----PELYKSRVLELNAS 122 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~----~~~~~~~~~~~~~~ 122 (294)
.+..+.+.-+...++.++|++..++.+.+.|......|++|+||||+|||+++..+|+.... ....+..++.++.+
T Consensus 8 ~~~~l~~~a~~g~ld~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~ 87 (387)
T d1qvra2 8 YGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMG 87 (387)
T ss_dssp HEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC-
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeHh
Confidence 34455566666777889999999999999999998899999999999999999999998742 23445677888766
Q ss_pred CCcch----hHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCC--------HHHHHHHHHHHHhhcCcceEEE
Q 022641 123 DDRGI----NVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMT--------EDAQNALRRTMETYSKVTRFFF 190 (294)
Q Consensus 123 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~--------~~~~~~L~~~l~~~~~~~~ii~ 190 (294)
..... ..+...+..+...... ...+.||||||+|.+- .+..+.|...|.. ....+|.
T Consensus 88 ~l~ag~~~~g~~e~r~~~i~~~~~~---------~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~r--g~~~~I~ 156 (387)
T d1qvra2 88 SLLAGAKYRGEFEERLKAVIQEVVQ---------SQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALAR--GELRLIG 156 (387)
T ss_dssp ----------CHHHHHHHHHHHHHT---------TCSSEEEEECCC-------------------HHHHHT--TCCCEEE
T ss_pred hhhcccCcchhHHHHHHHHHHHhcc---------CCCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHhC--CCcceee
Confidence 54332 2333333333332211 0123589999999983 2346778888876 5566777
Q ss_pred EecCC----cccchHhhccccEEEecCCCHHHHHHHHHHHHH----HhCCCCCHHHHHHHHhhc------cCcHHHHHHH
Q 022641 191 ICNYI----SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICN----EEGLNLDAEALSTLSSIS------QGDLRRAITY 256 (294)
Q Consensus 191 ~~~~~----~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~l~~l~~~~------~G~~r~~~~~ 256 (294)
+|+.. ..-+++|.+||+.|.+.+|+.++...+|+.... .+++.++++++..++++| ..-|..++.+
T Consensus 157 ~tT~~ey~~~e~d~al~rrF~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAidl 236 (387)
T d1qvra2 157 ATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDL 236 (387)
T ss_dssp EECHHHHHHHTTCTTTCSCCCCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHHHH
T ss_pred ecCHHHHHHhcccHHHHHhcccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHHHH
Confidence 77432 234688999999999999999999999987664 468999999999988874 3579999999
Q ss_pred HHHHHHHh
Q 022641 257 LQGAARLF 264 (294)
Q Consensus 257 l~~~~~~~ 264 (294)
++.++...
T Consensus 237 ld~a~a~~ 244 (387)
T d1qvra2 237 IDEAAARL 244 (387)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988664
No 21
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.74 E-value=2.6e-17 Score=131.38 Aligned_cols=212 Identities=18% Similarity=0.171 Sum_probs=139.9
Q ss_pred hhcccHHHHHHHHHHHHcC--CCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHh
Q 022641 62 DVAHQEEVVRVLTNTLETA--NCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAA 139 (294)
Q Consensus 62 ~~~g~~~~~~~l~~~l~~~--~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (294)
+++|+...++.+.+.+..- ....++|+|++|||||++|+++.... ......++.+++............+.....
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s---~~~~~~~~~~~~~~~~~~~~~~~lfg~~~~ 77 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLS---DRSKEPFVALNVASIPRDIFEAELFGYEKG 77 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHS---TTTTSCEEEEETTTSCHHHHHHHHHCBCTT
T ss_pred CeEecCHHHHHHHHHHHHHhCCCCCEEEECCCCcCHHHHHHHHHHhc---CCcccccccchhhhhhhcccHHHhcCcccC
Confidence 3567766776666665442 22359999999999999999998653 223456666766655333222222111000
Q ss_pred hhcc-cCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhc-----------CcceEEEEecCCc-------ccch
Q 022641 140 VAVG-SGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYS-----------KVTRFFFICNYIS-------RIIE 200 (294)
Q Consensus 140 ~~~~-~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~-----------~~~~ii~~~~~~~-------~~~~ 200 (294)
...+ .....+.....+.+.|+|||++.++...+..|++.++... ..+++|++++.+. .+.+
T Consensus 78 ~~~~~~~~~~g~l~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~ 157 (247)
T d1ny5a2 78 AFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFRE 157 (247)
T ss_dssp SSTTCCSCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHTTSSCH
T ss_pred CcCCcccccCCHHHccCCCEEEEeChHhCCHHHHHHHHHHHHhCCEEECCCCCceecCeEEEEecCCCHHHHHHcCCCcH
Confidence 0000 0001111122445699999999999999999999997532 2456888886542 3556
Q ss_pred Hhhcccc--EEEecCCC--HHHHHHHHHHHHH----HhCC---CCCHHHHHHHHhh-ccCcHHHHHHHHHHHHHHh-CCC
Q 022641 201 PLASRCA--KFRFKPLS--EEVMSSRVLHICN----EEGL---NLDAEALSTLSSI-SQGDLRRAITYLQGAARLF-GSS 267 (294)
Q Consensus 201 ~l~~r~~--~i~~~~~~--~~~~~~~l~~~~~----~~~~---~~~~~~l~~l~~~-~~G~~r~~~~~l~~~~~~~-~~~ 267 (294)
.|..|+. .|.++|+. .+++..++..++. +.+. .+++++++.|..+ +.||++++.++++.++... +..
T Consensus 158 ~L~~~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~~a~~~~~~~~ 237 (247)
T d1ny5a2 158 DLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKF 237 (247)
T ss_dssp HHHHHHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCCSSE
T ss_pred HHHhhcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 6777765 67888885 3567665555544 3343 3789999999988 5999999999999988777 556
Q ss_pred CChhhhhhh
Q 022641 268 ITSKDLISV 276 (294)
Q Consensus 268 it~~~v~~~ 276 (294)
|+.+++..+
T Consensus 238 I~~~dl~~l 246 (247)
T d1ny5a2 238 IDRGELSCL 246 (247)
T ss_dssp ECHHHHHHH
T ss_pred ECHHHcccc
Confidence 999988664
No 22
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.71 E-value=7e-17 Score=128.83 Aligned_cols=157 Identities=13% Similarity=0.160 Sum_probs=100.2
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcc---hhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEE
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRG---INVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 160 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli 160 (294)
.++|+||||||||++|+++|+++ +.+++.+++++... .......+..+..... ...+.+|+
T Consensus 42 ~vLL~GppGtGKT~la~alA~~~------~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~----------~~~p~il~ 105 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALAAKIAEES------NFPFIKICSPDKMIGFSETAKCQAMKKIFDDAY----------KSQLSCVV 105 (246)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH------TCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHH----------TSSEEEEE
T ss_pred EEEEECcCCCCHHHHHHHHhhcc------cccccccccccccccccccchhhhhhhhhhhhh----------hcccceee
Confidence 49999999999999999999999 78888887654321 1111122222221111 12346999
Q ss_pred EeCCCCC----------CHHHHHHHHHHHHhhcC---cceEEEEecCCcccchH-hhcccc-EEEecCCC-HHHHHHHHH
Q 022641 161 LDEADSM----------TEDAQNALRRTMETYSK---VTRFFFICNYISRIIEP-LASRCA-KFRFKPLS-EEVMSSRVL 224 (294)
Q Consensus 161 iDei~~l----------~~~~~~~L~~~l~~~~~---~~~ii~~~~~~~~~~~~-l~~r~~-~i~~~~~~-~~~~~~~l~ 224 (294)
|||+|.+ .....+.|+..++.... ++.+|.|||.+..+++. +.+||. .+.++.++ .+++..++.
T Consensus 106 iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~P~~~~r~~il~~l~ 185 (246)
T d1d2na_ 106 VDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALE 185 (246)
T ss_dssp ECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHH
T ss_pred hhhhhhHhhhcccccchhHHHHHHHHHHhcCCCccccceeeeeccCChhhccchhhcCccceEEecCCchhHHHHHHHHH
Confidence 9999865 23445667777665432 35677788988777654 667887 67775544 344444442
Q ss_pred HHHHHhCCCCCHHHHHHHHhhccC-----cHHHHHHHHHHHH
Q 022641 225 HICNEEGLNLDAEALSTLSSISQG-----DLRRAITYLQGAA 261 (294)
Q Consensus 225 ~~~~~~~~~~~~~~l~~l~~~~~G-----~~r~~~~~l~~~~ 261 (294)
.. ..+++..+..+++.+.| .++.++..++.+.
T Consensus 186 ----~~-~~~~~~~~~~i~~~~~g~~~~~~ik~ll~~ie~a~ 222 (246)
T d1d2na_ 186 ----LL-GNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSL 222 (246)
T ss_dssp ----HH-TCSCHHHHHHHHHHHTTSEEEECHHHHHHHHHHHT
T ss_pred ----hc-cCCChHHHHHHHHHcCCCccchhHHHHHHHHHHHH
Confidence 22 34677777888877665 4777777766443
No 23
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.68 E-value=1.3e-16 Score=120.66 Aligned_cols=166 Identities=19% Similarity=0.179 Sum_probs=119.9
Q ss_pred CCchhhhhcCCCcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcC----CCccCCcceeecCC
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG----PELYKSRVLELNAS 122 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~----~~~~~~~~~~~~~~ 122 (294)
+...+.++-+...++.++|++..++.+...+......|++|+||||+|||+++..+|+.... ....+..++.++.+
T Consensus 8 ~~~dlt~~a~~g~ld~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~ 87 (195)
T d1jbka_ 8 YTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 87 (195)
T ss_dssp HEEEHHHHHHTTCSCCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHH
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeHH
Confidence 34455666666777889999999999999999988899999999999999999999998742 23445667777644
Q ss_pred CC----cchhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCH--------HHHHHHHHHHHhhcCcceEEE
Q 022641 123 DD----RGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTE--------DAQNALRRTMETYSKVTRFFF 190 (294)
Q Consensus 123 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~--------~~~~~L~~~l~~~~~~~~ii~ 190 (294)
.. .....+...+.......... ....||+|||+|.+-. +..+.|...++. ....+|.
T Consensus 88 ~LiAg~~~rG~~E~rl~~il~e~~~~---------~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~r--g~l~~Ig 156 (195)
T d1jbka_ 88 ALVAGAKYRGEFEERLKGVLNDLAKQ---------EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALAR--GELHCVG 156 (195)
T ss_dssp HHHTTTCSHHHHHHHHHHHHHHHHHS---------TTTEEEEEETGGGGTT------CCCCHHHHHHHHHT--TSCCEEE
T ss_pred HHhccCCccHHHHHHHHHHHHHHhcC---------CCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHhC--CCceEEe
Confidence 32 23344555454444332110 1134999999998832 134788888885 5566777
Q ss_pred EecCC-----cccchHhhccccEEEecCCCHHHHHHHH
Q 022641 191 ICNYI-----SRIIEPLASRCAKFRFKPLSEEVMSSRV 223 (294)
Q Consensus 191 ~~~~~-----~~~~~~l~~r~~~i~~~~~~~~~~~~~l 223 (294)
+|... ..-+++|.+||+.|.+.+|+.++...+|
T Consensus 157 atT~eey~~~~e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 157 ATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp EECHHHHHHHTTTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred cCCHHHHHHHHHcCHHHHhcCCEeecCCCCHHHHHHHh
Confidence 77532 3457899999999999999999887765
No 24
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.67 E-value=3.7e-17 Score=135.08 Aligned_cols=148 Identities=19% Similarity=0.273 Sum_probs=97.8
Q ss_pred hhcccHHHHHHHHHHHHc--------------CCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch
Q 022641 62 DVAHQEEVVRVLTNTLET--------------ANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127 (294)
Q Consensus 62 ~~~g~~~~~~~l~~~l~~--------------~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~ 127 (294)
.++||+++++.+..++.+ ..+.+++|+||||||||.+|+++|+.+ ..+++.++++.....
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~------~~~~~~i~~s~~~~~ 88 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA------NAPFIKVEATKFTEV 88 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHH------TCCEEEEEGGGGSSC
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhcc------ccchhcccccccccc
Confidence 468999999988776631 134579999999999999999999998 566777766543211
Q ss_pred --------hHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHH------------HHHHHHHHHHhhc----
Q 022641 128 --------NVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTED------------AQNALRRTMETYS---- 183 (294)
Q Consensus 128 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~------------~~~~L~~~l~~~~---- 183 (294)
..+...+........ ...++.+|+|||+|.+.+. .++.|+..++...
T Consensus 89 ~~~~~~~~~~~~~~f~~a~~~~~---------~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~ 159 (309)
T d1ofha_ 89 GYVGKEVDSIIRDLTDSAGGAID---------AVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTK 159 (309)
T ss_dssp CSGGGSTTHHHHHHHHTTTTCHH---------HHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEET
T ss_pred eeEeeeccccccccchhhhcccc---------cccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecC
Confidence 122222211111000 0011359999999998532 4566888887421
Q ss_pred ------CcceEEEE----ecCCcccchHhhcccc-EEEecCCCHHHHHHHHH
Q 022641 184 ------KVTRFFFI----CNYISRIIEPLASRCA-KFRFKPLSEEVMSSRVL 224 (294)
Q Consensus 184 ------~~~~ii~~----~~~~~~~~~~l~~r~~-~i~~~~~~~~~~~~~l~ 224 (294)
.+..++++ .+.+..+.+++.+|+. .+.+.+|+..++.+++.
T Consensus 160 ~~~i~~s~ilfi~~ga~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~ 211 (309)
T d1ofha_ 160 HGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILT 211 (309)
T ss_dssp TEEEECTTCEEEEEECCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred CeEEEccceeEEeccchhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHH
Confidence 12223333 2456678899999998 79999999999998864
No 25
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.67 E-value=3.8e-16 Score=130.73 Aligned_cols=219 Identities=17% Similarity=0.120 Sum_probs=128.9
Q ss_pred CcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcC-------C----------Ccc--------
Q 022641 58 KQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG-------P----------ELY-------- 112 (294)
Q Consensus 58 ~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~-------~----------~~~-------- 112 (294)
.+|.+++||+.+++.|.-.+...+..|++|.||||||||++|+.++.-+.. . ...
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVI 83 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCTTCCCSCCCEE
T ss_pred CChhhccCcHHHHHHHHHHHhccCCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccccccchhhccccCcc
Confidence 378999999999987765554333357999999999999999999986610 0 000
Q ss_pred --CCcceeecCCCCcchhHHHHHHHHH-HhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhc------
Q 022641 113 --KSRVLELNASDDRGINVVRTKIKTF-AAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYS------ 183 (294)
Q Consensus 113 --~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~------ 183 (294)
..++... ........+...+... ...........+....+.+++++|||++.+++..++.|++.|++..
T Consensus 84 ~~~~~~~~~--~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~~~v~i~r~ 161 (333)
T d1g8pa_ 84 RKPTPVVDL--PLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERD 161 (333)
T ss_dssp EECCCEEEE--CTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHHSEEEECCT
T ss_pred cccCceeec--cCCCCcccccCcchhhhccccCcceeeccccccccccEeecccHHHHHHHHHHHHhhhhcCCeEEeccc
Confidence 0001111 1111111111000000 0000111112222333456799999999999999999999998643
Q ss_pred -------CcceEEEEecCC-cccchHhhcccc-EEEecCCC-HHHHHHHHHHHH--------------------------
Q 022641 184 -------KVTRFFFICNYI-SRIIEPLASRCA-KFRFKPLS-EEVMSSRVLHIC-------------------------- 227 (294)
Q Consensus 184 -------~~~~ii~~~~~~-~~~~~~l~~r~~-~i~~~~~~-~~~~~~~l~~~~-------------------------- 227 (294)
..+.++.++|.. ..+.+++++||. .+.+..+. ......++....
T Consensus 162 g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
T d1g8pa_ 162 GLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILE 241 (333)
T ss_dssp TCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHH
Confidence 345566666754 458899999998 57776664 232222221110
Q ss_pred ---HHhCCCCCHHHHHHHHhh---ccC-cHHHHHHHHHHHHHHh----CCCCChhhhhhhcc
Q 022641 228 ---NEEGLNLDAEALSTLSSI---SQG-DLRRAITYLQGAARLF----GSSITSKDLISVSG 278 (294)
Q Consensus 228 ---~~~~~~~~~~~l~~l~~~---~~G-~~r~~~~~l~~~~~~~----~~~it~~~v~~~~~ 278 (294)
.-..+.++++....+... .+. ++|....+++-+...+ ...|+.+||.+++.
T Consensus 242 ~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~V~~~di~~a~~ 303 (333)
T d1g8pa_ 242 ARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVAT 303 (333)
T ss_dssp HHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHH
T ss_pred HhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHH
Confidence 011345666666655544 222 6788777776554444 56799999988554
No 26
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.67 E-value=1.3e-15 Score=125.85 Aligned_cols=166 Identities=22% Similarity=0.269 Sum_probs=117.5
Q ss_pred hhhcccHHHHHHHHHHHHc-------CCC--CcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch----
Q 022641 61 KDVAHQEEVVRVLTNTLET-------ANC--PHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI---- 127 (294)
Q Consensus 61 ~~~~g~~~~~~~l~~~l~~-------~~~--~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~---- 127 (294)
+.++||+.+++.+...+.. ... .+++|+||+|||||.+|+.+|+.+ ..+++.++++.....
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l------~~~~i~~d~s~~~~~~~~~ 95 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL------GIELLRFDMSEYMERHTVS 95 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHH------TCEEEEEEGGGCSSSSCCS
T ss_pred CeecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHhhc------cCCeeEeccccccchhhhh
Confidence 5788999999988877742 111 148999999999999999999998 455666654432111
Q ss_pred --------h---HHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhc-----------Cc
Q 022641 128 --------N---VVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYS-----------KV 185 (294)
Q Consensus 128 --------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~-----------~~ 185 (294)
+ .....+..... ...+.++++||++.++++.++.|++++++.. .+
T Consensus 96 ~l~g~~~gy~g~~~~~~l~~~~~-------------~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n 162 (315)
T d1r6bx3 96 RLIGAPPGYVGFDQGGLLTDAVI-------------KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 162 (315)
T ss_dssp SSCCCCSCSHHHHHTTHHHHHHH-------------HCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTT
T ss_pred hhcccCCCccccccCChhhHHHH-------------hCccchhhhcccccccchHhhhhHHhhccceecCCCCCccCccc
Confidence 0 01011111111 1234699999999999999999999998532 34
Q ss_pred ceEEEEecCCc-------------------------ccchHhhcccc-EEEecCCCHHHHHHHHHHHHHH-------hC-
Q 022641 186 TRFFFICNYIS-------------------------RIIEPLASRCA-KFRFKPLSEEVMSSRVLHICNE-------EG- 231 (294)
Q Consensus 186 ~~ii~~~~~~~-------------------------~~~~~l~~r~~-~i~~~~~~~~~~~~~l~~~~~~-------~~- 231 (294)
..+|+|+|... .+.++|.+|+. ++.|.|++.+++..++...+.. .+
T Consensus 163 ~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i 242 (315)
T d1r6bx3 163 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGV 242 (315)
T ss_dssp EEEEEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCc
Confidence 55778876321 25688999998 7999999999999887776642 23
Q ss_pred -CCCCHHHHHHHHhh
Q 022641 232 -LNLDAEALSTLSSI 245 (294)
Q Consensus 232 -~~~~~~~l~~l~~~ 245 (294)
+.++++++..|++.
T Consensus 243 ~l~~~~~a~~~l~~~ 257 (315)
T d1r6bx3 243 SLEVSQEARNWLAEK 257 (315)
T ss_dssp EEEECHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHh
Confidence 34799999999876
No 27
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.64 E-value=1.7e-15 Score=127.08 Aligned_cols=173 Identities=19% Similarity=0.222 Sum_probs=112.0
Q ss_pred hhhcccHHHHHHHHHHHH------------------------------cCCCCcEEEECCCCCCHHHHHHHHHHHhcCCC
Q 022641 61 KDVAHQEEVVRVLTNTLE------------------------------TANCPHMLFYGPPGTGKTTTALAIAHQLFGPE 110 (294)
Q Consensus 61 ~~~~g~~~~~~~l~~~l~------------------------------~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~ 110 (294)
+.++||+++++.+..+++ .....|++|+||+|||||.+|+.||+.+
T Consensus 17 ~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~---- 92 (364)
T d1um8a_ 17 NYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHL---- 92 (364)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHT----
T ss_pred CeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhc----
Confidence 468899999988876663 1244579999999999999999999987
Q ss_pred ccCCcceeecCCCCcchh----HHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeCCCC--------------CCHHHH
Q 022641 111 LYKSRVLELNASDDRGIN----VVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDEADS--------------MTEDAQ 172 (294)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDei~~--------------l~~~~~ 172 (294)
..+++.++++...... .....+..+....... ....+++++++||++. .++..+
T Consensus 93 --~~~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~------v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~ 164 (364)
T d1um8a_ 93 --DIPIAISDATSLTEAGYVGEDVENILTRLLQASDWN------VQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQ 164 (364)
T ss_dssp --TCCEEEEEGGGCC--------CTHHHHHHHHHTTTC------HHHHTTSEEEEETGGGC--------------CHHHH
T ss_pred --ccceeehhhhhcccchhhHhhhccchhhhhhhchhH------HHHhhcccchhhhhhhhccccccccccccccchHHH
Confidence 5666666655432211 1112222222211110 0112345999999998 556789
Q ss_pred HHHHHHHHhhc-------------CcceEEEEecC---------------------------------------------
Q 022641 173 NALRRTMETYS-------------KVTRFFFICNY--------------------------------------------- 194 (294)
Q Consensus 173 ~~L~~~l~~~~-------------~~~~ii~~~~~--------------------------------------------- 194 (294)
+.|+++++... ....++.++|-
T Consensus 165 ~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (364)
T d1um8a_ 165 QALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQT 244 (364)
T ss_dssp HHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCH
T ss_pred HhhhhhhcCceeccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccH
Confidence 99999998311 11112222211
Q ss_pred ----CcccchHhhcccc-EEEecCCCHHHHHHHHHH-----------HHHHhCCC--CCHHHHHHHHhh
Q 022641 195 ----ISRIIEPLASRCA-KFRFKPLSEEVMSSRVLH-----------ICNEEGLN--LDAEALSTLSSI 245 (294)
Q Consensus 195 ----~~~~~~~l~~r~~-~i~~~~~~~~~~~~~l~~-----------~~~~~~~~--~~~~~l~~l~~~ 245 (294)
...+.|+|..|+. ++.|.|++.+++..++.. .++.+|+. +++++++.|++.
T Consensus 245 ~~~~~~~f~PEf~gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~ 313 (364)
T d1um8a_ 245 HDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQL 313 (364)
T ss_dssp HHHHHTTCCHHHHTTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHh
Confidence 0125688999998 789999999999999853 23334554 789999999986
No 28
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.63 E-value=1.8e-15 Score=124.65 Aligned_cols=181 Identities=24% Similarity=0.357 Sum_probs=119.1
Q ss_pred hhhcccHHHHHHHHHHHHc-------CCCC--cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHH
Q 022641 61 KDVAHQEEVVRVLTNTLET-------ANCP--HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVR 131 (294)
Q Consensus 61 ~~~~g~~~~~~~l~~~l~~-------~~~~--~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (294)
+.++||+++++.+...+.. ...| .++|+||+|||||.+|+.+++.+++. ...++.++++.........
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~---~~~~~~~~~~~~~~~~~~~ 99 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT---EEAMIRIDMTEYMEKHAVS 99 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS---GGGEEEECTTTCCSSGGGG
T ss_pred CeEeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCC---CcceEEEeccccccchhhh
Confidence 4778999999888776642 1222 37899999999999999999998543 3456666655433221111
Q ss_pred HHHHHHH---hhhcccCccCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhc-----------CcceEEEEecCC--
Q 022641 132 TKIKTFA---AVAVGSGQRRGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYS-----------KVTRFFFICNYI-- 195 (294)
Q Consensus 132 ~~~~~~~---~~~~~~~~~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~-----------~~~~ii~~~~~~-- 195 (294)
..+..-. ....+ +.-........+.|+++||++..++..++.|++++++.. .+..+|+|||..
T Consensus 100 ~L~g~~~gyvG~~~~-~~l~~~~~~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~~gr~v~~~~~i~i~tsnlG~~ 178 (315)
T d1qvra3 100 RLIGAPPGYVGYEEG-GQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSP 178 (315)
T ss_dssp GC---------------CHHHHHHHCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCSSSCCEECTTEEEEEECCTTHH
T ss_pred hhcCCCCCCcCcccC-ChHHHHHHhCCCcEEEEehHhhcCHHHHHHHHHHhccCceeCCCCcEecCcceEEEEecccChH
Confidence 1110000 00000 000000001234699999999999999999999997532 345577888742
Q ss_pred ------------------------cccchHhhcccc-EEEecCCCHHHHHHHHHHHHHH-------hC--CCCCHHHHHH
Q 022641 196 ------------------------SRIIEPLASRCA-KFRFKPLSEEVMSSRVLHICNE-------EG--LNLDAEALST 241 (294)
Q Consensus 196 ------------------------~~~~~~l~~r~~-~i~~~~~~~~~~~~~l~~~~~~-------~~--~~~~~~~l~~ 241 (294)
..+.++|.+|+. ++.|.|++.+++..++...+.+ .+ +.+++++++.
T Consensus 179 ~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~i~l~i~~~~~~~ 258 (315)
T d1qvra3 179 LILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDF 258 (315)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTTCEEEECHHHHHH
T ss_pred HHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhccccccccHHHHHH
Confidence 226788999998 6789999999999998765543 23 3479999999
Q ss_pred HHhh
Q 022641 242 LSSI 245 (294)
Q Consensus 242 l~~~ 245 (294)
|++.
T Consensus 259 L~~~ 262 (315)
T d1qvra3 259 LAER 262 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9987
No 29
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.46 E-value=1.3e-15 Score=127.51 Aligned_cols=177 Identities=17% Similarity=0.107 Sum_probs=100.3
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEe
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILD 162 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiD 162 (294)
+.++|+||||||||++|.++++.+ +..++.+++++..+...+........... .............+.++++|
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~------~~~~i~in~s~~rs~~~l~~~~~~~~~l~-d~~~~~~~~~~~~~~~~~~D 227 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELC------GGKALNVNLPLDRLNFELGVAIDQFLVVF-EDVKGTGGESRDLPSGQGIN 227 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH------CCEEECCSSCTTTHHHHHGGGTTCSCEEE-TTCCCSTTTTTTCCCCSHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHc------CCCEEEEECcchhhHHHHHhHHHHHHHHH-HHHHHhhhhccCCCCeEEEe
Confidence 469999999999999999999999 88899999888765443322211110000 00000001111223455666
Q ss_pred CCCCCCHHHHHHHHHHHHhhc--------------CcceEEEEecCCcccchHhhcccc-EEEecC-CCHHHHHHHHHHH
Q 022641 163 EADSMTEDAQNALRRTMETYS--------------KVTRFFFICNYISRIIEPLASRCA-KFRFKP-LSEEVMSSRVLHI 226 (294)
Q Consensus 163 ei~~l~~~~~~~L~~~l~~~~--------------~~~~ii~~~~~~~~~~~~l~~r~~-~i~~~~-~~~~~~~~~l~~~ 226 (294)
|+|.+ ...++... ....+|+|||..... .....|+. .+.+.+ +.......++..+
T Consensus 228 eiD~l--------~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~~~-~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i 298 (362)
T d1svma_ 228 NLDNL--------RDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSVP-KTLQARFVKQIDFRPKDYLKHCLERSEFL 298 (362)
T ss_dssp HHHTT--------HHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCCCC-HHHHTTEEEEEECCCCHHHHHHHHTCTHH
T ss_pred hHhhc--------ccccCCcchhhhhhhhhchhhhccCCceeeccccccc-ccccccCceEEeecCCCcHHHHHHHHHHH
Confidence 66554 22233211 012378889864321 12233665 344433 3445555777788
Q ss_pred HHHhCCCCCHHHHHH-HHhhccCcHHHHHHHHHHHHH-HhCCCCChhhhhh
Q 022641 227 CNEEGLNLDAEALST-LSSISQGDLRRAITYLQGAAR-LFGSSITSKDLIS 275 (294)
Q Consensus 227 ~~~~~~~~~~~~l~~-l~~~~~G~~r~~~~~l~~~~~-~~~~~it~~~v~~ 275 (294)
++.+.+..+.+.+.. +...+++|++.+++.+...+. .....++...+..
T Consensus 299 ~~~~~l~~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~ei~~~~~~~ 349 (362)
T d1svma_ 299 LEKRIIQSGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQK 349 (362)
T ss_dssp HHTTCTTCHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHHHCCHHHHHH
T ss_pred hcccCCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhhhccHHHHHH
Confidence 888888888777766 446678889988876654332 2233455544443
No 30
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.40 E-value=9.3e-13 Score=107.35 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=77.0
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcc------hhHHHHHHHHHHhhhcccCccCCCCCCCCcE
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRG------INVVRTKIKTFAAVAVGSGQRRGGYPCPPYK 157 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
+++|+||||||||.+|+++|.++.. ..+++.+++++..+ ...++..+..... +.
T Consensus 125 ~~l~~G~pG~GKT~la~ala~~~~~----~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~----------------~~ 184 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLVHALGEALGG----KDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ----------------HR 184 (321)
T ss_dssp EEEEECSSSSCHHHHHHHHHHHHHT----TSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH----------------CS
T ss_pred eEEEECCCCccHHHHHHHHHHHhcC----CCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh----------------cc
Confidence 3667999999999999999999721 24566777666443 3344444443321 13
Q ss_pred EEEEeCCCCCCH------------HHHHHHHHHHHhhc--CcceEEEEecCCcccchHh----h--cccc-EEEecCCCH
Q 022641 158 IIILDEADSMTE------------DAQNALRRTMETYS--KVTRFFFICNYISRIIEPL----A--SRCA-KFRFKPLSE 216 (294)
Q Consensus 158 lliiDei~~l~~------------~~~~~L~~~l~~~~--~~~~ii~~~~~~~~~~~~l----~--~r~~-~i~~~~~~~ 216 (294)
+|||||+|.+.. ...+.|+..++.+. ..+.+|.+||. ..+++.+ . .||. .+.+.+|+.
T Consensus 185 ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~-~~~~~~i~~~~~r~~Rf~~~v~v~~pd~ 263 (321)
T d1w44a_ 185 VIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNP-TSNDDKIVELVKEASRSNSTSLVISTDV 263 (321)
T ss_dssp EEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCC-CCCCHHHHHHHHHHHHHSCSEEEEECSS
T ss_pred EEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCC-cccccchhhhhhccCcccceeecCCCCh
Confidence 999999999842 24456666666433 34667777774 3333333 2 3555 788888887
Q ss_pred HHHHHHHH
Q 022641 217 EVMSSRVL 224 (294)
Q Consensus 217 ~~~~~~l~ 224 (294)
+....++.
T Consensus 264 ~~r~~il~ 271 (321)
T d1w44a_ 264 DGEWQVLT 271 (321)
T ss_dssp TTEEEEEE
T ss_pred HHHHHHHH
Confidence 77766664
No 31
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.35 E-value=2.1e-11 Score=98.45 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=109.4
Q ss_pred cchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecC-----CCCcchhHHHHH
Q 022641 59 QVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNA-----SDDRGINVVRTK 133 (294)
Q Consensus 59 ~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 133 (294)
.-++++|++..++.+... ..+.++|+||+|+|||++++.+++.+ +..+..++. ............
T Consensus 10 ~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINEL------NLPYIYLDLRKFEERNYISYKDFLLE 79 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHH------TCCEEEEEGGGGTTCSCCCHHHHHHH
T ss_pred ChhhCCChHHHHHHHHhc----cCCEEEEEcCCCCcHHHHHHHHHHHC------CCCeEEEEeccccccccccHHHHHHH
Confidence 467899999998887653 44579999999999999999999987 333222221 111112222221
Q ss_pred HHHHHhhhc----------ccC---------c----cC--C----------CCCCCCcEEEEEeCCCCCCHH----HHHH
Q 022641 134 IKTFAAVAV----------GSG---------Q----RR--G----------GYPCPPYKIIILDEADSMTED----AQNA 174 (294)
Q Consensus 134 ~~~~~~~~~----------~~~---------~----~~--~----------~~~~~~~~lliiDei~~l~~~----~~~~ 174 (294)
+........ ... . .. . .....++.++++||++.+... ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~~~~ 159 (283)
T d2fnaa2 80 LQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNLLPA 159 (283)
T ss_dssp HHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCCHHH
T ss_pred HHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccchHHHHHH
Confidence 111111000 000 0 00 0 002245678999999876432 2333
Q ss_pred HHHHHHhhcCcceEEEEecCCccc---------chHh-hccccEEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHh
Q 022641 175 LRRTMETYSKVTRFFFICNYISRI---------IEPL-ASRCAKFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSS 244 (294)
Q Consensus 175 L~~~l~~~~~~~~ii~~~~~~~~~---------~~~l-~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~ 244 (294)
+...... ......++++.....+ ...+ .+++..+.+.|++.++..+++.+.+...++..+ .++.+.+
T Consensus 160 l~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~--~~~~i~~ 236 (283)
T d2fnaa2 160 LAYAYDN-LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFK--DYEVVYE 236 (283)
T ss_dssp HHHHHHH-CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCC--CHHHHHH
T ss_pred HHHHHHh-hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHHhhhhhcCCCHH--HHHHHHH
Confidence 4444433 3445555554332111 1112 223457999999999999999999887776544 4788999
Q ss_pred hccCcHHHHHHHHH
Q 022641 245 ISQGDLRRAITYLQ 258 (294)
Q Consensus 245 ~~~G~~r~~~~~l~ 258 (294)
.++|.|..+..+..
T Consensus 237 ~~~G~P~~L~~~~~ 250 (283)
T d2fnaa2 237 KIGGIPGWLTYFGF 250 (283)
T ss_dssp HHCSCHHHHHHHHH
T ss_pred HhCCCHHHHHHHHH
Confidence 99999975443333
No 32
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.25 E-value=1.1e-10 Score=99.75 Aligned_cols=56 Identities=23% Similarity=0.401 Sum_probs=46.1
Q ss_pred hhcccHHHHHHHHHHHHcC--------------CCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCC
Q 022641 62 DVAHQEEVVRVLTNTLETA--------------NCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASD 123 (294)
Q Consensus 62 ~~~g~~~~~~~l~~~l~~~--------------~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~ 123 (294)
.++||+.+++.|.-+++++ .+.|+||+||+|||||.||+.||+.+ +.+|+.++++.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l------~VPFv~~daT~ 84 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA------NAPFIKVEATK 84 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHT------TCCEEEEEGGG
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHh------CCCEEEeecce
Confidence 5789999999887777542 24589999999999999999999998 77777776654
No 33
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.23 E-value=2e-10 Score=92.73 Aligned_cols=185 Identities=11% Similarity=0.097 Sum_probs=107.2
Q ss_pred hhcccHHHHHHHHHHHHcC---CCCcEEEECCCCCCHHHHHHHHHHHhcC--CCccCCcceeecCCCCcchhHHHHHHHH
Q 022641 62 DVAHQEEVVRVLTNTLETA---NCPHMLFYGPPGTGKTTTALAIAHQLFG--PELYKSRVLELNASDDRGINVVRTKIKT 136 (294)
Q Consensus 62 ~~~g~~~~~~~l~~~l~~~---~~~~ill~Gp~G~GKT~la~~la~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++|++..++.+..++... ....+.|+|..|+|||+||+.+.+.... ...+... +-+..+...+...+...+..
T Consensus 21 ~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~-~Wv~vs~~~~~~~l~~~~~~ 99 (277)
T d2a5yb3 21 TCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSI-VWLKDSGTAPKSTFDLFTDI 99 (277)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEE-EEEECCCCSTTHHHHHHHHH
T ss_pred ceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceE-EEEEecCCCCHHHHHHHHHH
Confidence 4669999999998888542 2234889999999999999999887521 1111111 12233333333333333333
Q ss_pred HHhhhcccC-c---cCC-------------CCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccc
Q 022641 137 FAAVAVGSG-Q---RRG-------------GYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRII 199 (294)
Q Consensus 137 ~~~~~~~~~-~---~~~-------------~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~ 199 (294)
......... . ... .....++.++|+|+++.. ..... +. ....++|+||+.. .+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~--~~~~~----~~--~~~srilvTTR~~-~v~ 170 (277)
T d2a5yb3 100 LLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE--ETIRW----AQ--ELRLRCLVTTRDV-EIS 170 (277)
T ss_dssp HHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH--HHHHH----HH--HTTCEEEEEESBG-GGG
T ss_pred HHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH--hhhhh----hc--ccCceEEEEeehH-HHH
Confidence 222111100 0 000 011346779999999753 22221 22 2345678888754 334
Q ss_pred hHhhccccEEEecCCCHHHHHHHHHHHHHHhCC-CCCHHHHHHHHhhccCcHHHHHHH
Q 022641 200 EPLASRCAKFRFKPLSEEVMSSRVLHICNEEGL-NLDAEALSTLSSISQGDLRRAITY 256 (294)
Q Consensus 200 ~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~l~~l~~~~~G~~r~~~~~ 256 (294)
..+...+..+.+.+++.++..+++...+..... .-.++....|++.|+|.|=.+..+
T Consensus 171 ~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~i 228 (277)
T d2a5yb3 171 NAASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMF 228 (277)
T ss_dssp GGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhcCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHH
Confidence 455556678999999999999998653321111 112455788999999998654443
No 34
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.71 E-value=2.2e-08 Score=74.77 Aligned_cols=23 Identities=39% Similarity=0.673 Sum_probs=21.6
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||+|+|||||++.++..+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l 24 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcC
Confidence 48999999999999999999987
No 35
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=98.64 E-value=8.5e-08 Score=71.53 Aligned_cols=117 Identities=20% Similarity=0.327 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHcCCCCc-EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCc
Q 022641 68 EVVRVLTNTLETANCPH-MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQ 146 (294)
Q Consensus 68 ~~~~~l~~~l~~~~~~~-ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (294)
.-+..+..++......+ ++|+|||+||||.++.++.+-+ ...++....+. + ... +..+
T Consensus 38 ~Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l------~G~vis~~N~~--s-~F~---Lq~l--------- 96 (205)
T d1tuea_ 38 TFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFI------QGAVISFVNST--S-HFW---LEPL--------- 96 (205)
T ss_dssp HHHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHH------TCEECCCCCSS--S-CGG---GGGG---------
T ss_pred HHHHHHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHh------CCEEEeccCCC--C-Ccc---cccc---------
Confidence 44466777776554445 9999999999999999999987 33332221111 0 000 0111
Q ss_pred cCCCCCCCCcEEEEEeCCCCCCHHHHHH-HHHHHHhhc-------------CcceEEEEecCCc---ccchHhhccccEE
Q 022641 147 RRGGYPCPPYKIIILDEADSMTEDAQNA-LRRTMETYS-------------KVTRFFFICNYIS---RIIEPLASRCAKF 209 (294)
Q Consensus 147 ~~~~~~~~~~~lliiDei~~l~~~~~~~-L~~~l~~~~-------------~~~~ii~~~~~~~---~~~~~l~~r~~~i 209 (294)
....++++||+........+. +..+++..+ ....+|+|+|..- .-...|.+|..++
T Consensus 97 -------~~~kv~l~dD~t~~~~~~~d~~lK~ll~G~~vsvd~KhK~~vqi~~pPliITsN~~~~~~d~~~~L~sRi~~f 169 (205)
T d1tuea_ 97 -------TDTKVAMLDDATTTCWTYFDTYMRNALDGNPISIDRKHKPLIQLKCPPILLTTNIHPAKDNRWPYLESRITVF 169 (205)
T ss_dssp -------TTCSSEEEEEECHHHHHHHHHHCHHHHHTCCEEEC----CCEEECCCCEEEEESSCTTSSSSCHHHHTSCEEE
T ss_pred -------cCCeEEEEeccccchHHHHHHHHHhccCCCeeeeecccCCcccccCCCEEEEcCCCCCccccchhhhheEEEE
Confidence 112489999986655444444 455665311 1234788887542 2346788999988
Q ss_pred Eec
Q 022641 210 RFK 212 (294)
Q Consensus 210 ~~~ 212 (294)
.|+
T Consensus 170 ~F~ 172 (205)
T d1tuea_ 170 EFP 172 (205)
T ss_dssp ECC
T ss_pred ECC
Confidence 886
No 36
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.59 E-value=2.9e-08 Score=79.39 Aligned_cols=33 Identities=30% Similarity=0.519 Sum_probs=28.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNAS 122 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~ 122 (294)
.++|+||||||||++|++++.++ ...++.++++
T Consensus 34 ~ilL~GpPGtGKT~la~~la~~~------~~~~~~i~~d 66 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLRSAIFEET------QGNVIVIDND 66 (273)
T ss_dssp EEEEECCTTSCTHHHHHHHHHHT------TTCCEEECTH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh------hcceEEEecH
Confidence 49999999999999999999998 5667777653
No 37
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.57 E-value=1.8e-07 Score=77.59 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCc
Q 022641 67 EEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQ 146 (294)
Q Consensus 67 ~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (294)
+..+..+...+.. +..+|+||||||||+++..+...+.........-+.+-++.......+.+.+............
T Consensus 151 ~~Q~~A~~~al~~---~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~ 227 (359)
T d1w36d1 151 NWQKVAAAVALTR---RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE 227 (359)
T ss_dssp CHHHHHHHHHHTB---SEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSC
T ss_pred cHHHHHHHHHHcC---CeEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHHHHHHHhhcCchhh
Confidence 3444555555533 3599999999999999877665552111111122333444444444444333322111100000
Q ss_pred -------------c------------CCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCC
Q 022641 147 -------------R------------RGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYI 195 (294)
Q Consensus 147 -------------~------------~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~ 195 (294)
. .........++|||||+.+++......++. ..+....+|+++...
T Consensus 228 ~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~---~~~~~~~lILvGD~~ 298 (359)
T d1w36d1 228 QKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLID---ALPDHARVIFLGDRD 298 (359)
T ss_dssp CCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHH---TCCTTCEEEEEECTT
T ss_pred hhhhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccCHHHHHHHHH---HhcCCCEEEEECChh
Confidence 0 000111245799999999998766555554 445667788888553
No 38
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.36 E-value=1.2e-07 Score=69.55 Aligned_cols=30 Identities=30% Similarity=0.575 Sum_probs=25.9
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhcCCCccCCccee
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLE 118 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~ 118 (294)
.+|+|+|||||||||+++.|++.+ +.+++.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L------~~~~id 32 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQL------NMEFYD 32 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHT------TCEEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh------CCCeEe
Confidence 469999999999999999999998 555554
No 39
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=98.35 E-value=1.2e-07 Score=70.05 Aligned_cols=31 Identities=32% Similarity=0.573 Sum_probs=26.5
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCccee
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLE 118 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~ 118 (294)
.++|+|+||||+||||+++.|++.+ +..++.
T Consensus 4 ~~~I~i~G~pGsGKTTia~~La~~l------~~~~i~ 34 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKELASKS------GLKYIN 34 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH------CCEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH------CCcEEe
Confidence 4679999999999999999999998 555553
No 40
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=98.32 E-value=5.4e-06 Score=59.54 Aligned_cols=23 Identities=35% Similarity=0.421 Sum_probs=20.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|+|+||||+||||+|+.+....
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHhC
Confidence 37899999999999999987765
No 41
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.31 E-value=9.9e-07 Score=65.21 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=45.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCccCCCCCCCCcEEEEEeC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIIILDE 163 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lliiDe 163 (294)
-++++|+||+||||+|+.++... + +..++..+..........+...... +..+|+|.
T Consensus 16 liil~G~pGsGKST~a~~l~~~~------~--~~~i~~D~~~~~~~~~~~~~~~l~~---------------g~~vIiD~ 72 (172)
T d1yj5a2 16 VVVAVGFPGAGKSTFIQEHLVSA------G--YVHVNRDTLGSWQRCVSSCQAALRQ---------------GKRVVIDN 72 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHTGGG------T--CEEEEHHHHCSHHHHHHHHHHHHHT---------------TCCEEEES
T ss_pred EEEEECCCCCCHHHHHHHHHHhc------C--CEEEchHHHHHHHHHHHHHHHHHHC---------------CCCceeeC
Confidence 49999999999999999887654 2 2334333333333332222222211 12577887
Q ss_pred CCCCCHHHHHHHHHHHHhhcCcce
Q 022641 164 ADSMTEDAQNALRRTMETYSKVTR 187 (294)
Q Consensus 164 i~~l~~~~~~~L~~~l~~~~~~~~ 187 (294)
... .......+..+.........
T Consensus 73 t~~-~~~~R~~~~~~a~~~~~~~~ 95 (172)
T d1yj5a2 73 TNP-DVPSRARYIQCAKDAGVPCR 95 (172)
T ss_dssp CCC-SHHHHHHHHHHHHHHTCCEE
T ss_pred cCC-CHHHHHHHHHHHHhcCCCEE
Confidence 654 45566666666655444433
No 42
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.31 E-value=2.1e-07 Score=68.47 Aligned_cols=32 Identities=31% Similarity=0.594 Sum_probs=27.7
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeec
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELN 120 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~ 120 (294)
|+++|+|+||+||||+++.+++.+ +.+|+..+
T Consensus 2 p~IvliG~~G~GKSTig~~La~~l------~~~fiD~D 33 (165)
T d2iyva1 2 PKAVLVGLPGSGKSTIGRRLAKAL------GVGLLDTD 33 (165)
T ss_dssp CSEEEECSTTSSHHHHHHHHHHHH------TCCEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHh------CCCeEeec
Confidence 578999999999999999999999 66776543
No 43
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=98.26 E-value=1.9e-06 Score=61.02 Aligned_cols=92 Identities=23% Similarity=0.232 Sum_probs=47.7
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhccc---Cc-------------
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGS---GQ------------- 146 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------- 146 (294)
+..+|.+|+|+|||.++-.+.... +..++.+.... .-...+...+.......... +.
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~------~~~vli~~P~~-~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQ------GYKVLVLNPSV-AATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTY 81 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTT------TCCEEEEESCH-HHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEEEH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHc------CCcEEEEcChH-HHHHHHHHHHHHHhhccccccccccccccccceEEEee
Confidence 348999999999999886655443 33333332222 12222222222221110000 00
Q ss_pred ----cCCCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHh
Q 022641 147 ----RRGGYPCPPYKIIILDEADSMTEDAQNALRRTMET 181 (294)
Q Consensus 147 ----~~~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~ 181 (294)
........+.++||+||+|.++......+..+++.
T Consensus 82 ~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~l~~ 120 (136)
T d1a1va1 82 GKFLADGGCSGGAYDIIICDECHSTDATSILGIGTVLDQ 120 (136)
T ss_dssp HHHHHTTGGGGCCCSEEEEETTTCCSHHHHHHHHHHHHH
T ss_pred eeeccccchhhhcCCEEEEecccccCHHHHHHHHHHHHH
Confidence 00011224567999999999987765555555543
No 44
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=98.21 E-value=4.1e-07 Score=66.62 Aligned_cols=30 Identities=37% Similarity=0.525 Sum_probs=26.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceee
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLEL 119 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~ 119 (294)
||+|+|+||+||||+++.||+.+ +.+++..
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l------~~~~~d~ 31 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDL------DLVFLDS 31 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH------TCEEEEH
T ss_pred cEEEECCCCCCHHHHHHHHHHHh------CCCEEec
Confidence 68999999999999999999999 7777754
No 45
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=98.19 E-value=3.5e-07 Score=68.41 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=22.6
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+|+|+|||||||||+|+.|++.+
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 459999999999999999999998
No 46
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.14 E-value=6.9e-07 Score=66.57 Aligned_cols=25 Identities=40% Similarity=0.634 Sum_probs=23.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++++|+|||||||||+++.++..+.
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~ 26 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHH
Confidence 4799999999999999999999983
No 47
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=98.12 E-value=7.9e-07 Score=65.64 Aligned_cols=30 Identities=23% Similarity=0.388 Sum_probs=26.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceee
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLEL 119 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~ 119 (294)
.|+|+|+||+||||+++.+|+.+ +.+++..
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~L------g~~~id~ 33 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARAL------GYEFVDT 33 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH------TCEEEEH
T ss_pred CEEEECCCCCCHHHHHHHHHHHh------CCCEEeh
Confidence 58899999999999999999999 6776653
No 48
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=98.08 E-value=6.3e-06 Score=58.11 Aligned_cols=18 Identities=33% Similarity=0.368 Sum_probs=15.4
Q ss_pred CcEEEECCCCCCHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~ 100 (294)
.+.+|.+|+|+|||..+-
T Consensus 8 ~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp CEEEECCCTTSSTTTTHH
T ss_pred CcEEEEcCCCCChhHHHH
Confidence 479999999999997663
No 49
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=98.07 E-value=1.1e-06 Score=64.73 Aligned_cols=26 Identities=46% Similarity=0.639 Sum_probs=23.3
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..-+|+|+||||+||||+++.|++.+
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHh
Confidence 34469999999999999999999987
No 50
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=98.06 E-value=1.3e-06 Score=64.27 Aligned_cols=23 Identities=39% Similarity=0.651 Sum_probs=21.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||||+||||+++.|++.+
T Consensus 8 iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 48899999999999999999998
No 51
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.05 E-value=8.1e-07 Score=65.68 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=26.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNA 121 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~ 121 (294)
.++|.||||+||||+++.+++.+ +.+++.++.
T Consensus 6 iI~l~G~~GsGKSTia~~La~~l------g~~~~~~~~ 37 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIAEALANLP------GVPKVHFHS 37 (176)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCS------SSCEEEECT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh------CCCEEEecH
Confidence 58899999999999999999887 566665543
No 52
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=98.03 E-value=1.4e-06 Score=64.08 Aligned_cols=23 Identities=43% Similarity=0.668 Sum_probs=21.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||||+||||+|+.|++.+
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHc
Confidence 48999999999999999999987
No 53
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=98.02 E-value=2.4e-06 Score=63.03 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=22.3
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.|+|+||||+||||+|+.|++.+
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l 27 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc
Confidence 358999999999999999999998
No 54
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.01 E-value=2e-05 Score=58.42 Aligned_cols=23 Identities=48% Similarity=0.917 Sum_probs=21.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++|.||||+||||+++.|++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 58999999999999999999998
No 55
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.01 E-value=2.1e-05 Score=59.64 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=29.0
Q ss_pred cccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 64 AHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 64 ~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.-++-..+.+..++.. .+.++.+|+|+|||.++..++.++
T Consensus 70 ~Lr~yQ~eav~~~~~~---~~~ll~~~tG~GKT~~a~~~~~~~ 109 (206)
T d2fz4a1 70 SLRDYQEKALERWLVD---KRGCIVLPTGSGKTHVAMAAINEL 109 (206)
T ss_dssp CCCHHHHHHHHHHTTT---SEEEEEESSSTTHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHhC---CCcEEEeCCCCCceehHHhHHHHh
Confidence 3445555566555543 247888999999999998888876
No 56
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=98.00 E-value=9.4e-06 Score=61.32 Aligned_cols=26 Identities=31% Similarity=0.318 Sum_probs=22.6
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
+..++|+||+|+||||++--||..+.
T Consensus 6 ~~vi~lvGptGvGKTTTiaKLA~~~~ 31 (207)
T d1okkd2 6 GRVVLVVGVNGVGKTTTIAKLGRYYQ 31 (207)
T ss_dssp SSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999998874
No 57
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.99 E-value=1.8e-06 Score=63.91 Aligned_cols=24 Identities=25% Similarity=0.296 Sum_probs=22.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.|+|+|+||+||||+|+.|++.+.
T Consensus 8 ~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 8 TIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 488999999999999999999983
No 58
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.96 E-value=6.8e-06 Score=62.18 Aligned_cols=24 Identities=42% Similarity=0.470 Sum_probs=21.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|+||+|+||||++.-||..+.
T Consensus 11 vi~lvGptGvGKTTTiAKLA~~~~ 34 (211)
T d2qy9a2 11 VILMVGVNGVGKTTTIGKLARQFE 34 (211)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 378899999999999999998874
No 59
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.92 E-value=4.1e-05 Score=60.24 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=69.7
Q ss_pred HHHHHHHHcC-CCCc-EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCccC
Q 022641 71 RVLTNTLETA-NCPH-MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRR 148 (294)
Q Consensus 71 ~~l~~~l~~~-~~~~-ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (294)
..+..++... ...+ ++|+||+++|||+++.++.+.+ +. +..++.+.... . +.
T Consensus 91 ~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l------g~-~~~~~~~~~~f-~-----l~------------- 144 (267)
T d1u0ja_ 91 SVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV------PF-YGCVNWTNENF-P-----FN------------- 144 (267)
T ss_dssp HHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS------SC-EEECCTTCSSC-T-----TG-------------
T ss_pred HHHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHh------cc-hhhccccCCCc-c-----cc-------------
Confidence 4555566433 3334 8999999999999999999876 21 11222111100 0 00
Q ss_pred CCCCCCCcEEEEEeCCCCCCHHHHHHHHHHHHh--------------hcCcceEEEEecCCcc----------cchHhhc
Q 022641 149 GGYPCPPYKIIILDEADSMTEDAQNALRRTMET--------------YSKVTRFFFICNYISR----------IIEPLAS 204 (294)
Q Consensus 149 ~~~~~~~~~lliiDei~~l~~~~~~~L~~~l~~--------------~~~~~~ii~~~~~~~~----------~~~~l~~ 204 (294)
......++++||...-. ...+.+..++.. ......+|+++|+... -...+.+
T Consensus 145 ---~l~~k~~~~~~e~~~~~-~~~~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~~~~~~~~l~~ 220 (267)
T d1u0ja_ 145 ---DCVDKMVIWWEEGKMTA-KVVESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNSTTFEHQQPLQD 220 (267)
T ss_dssp ---GGSSCSEEEECSCCEET-TTHHHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEEECTTHHHHHT
T ss_pred ---ccCCCEEEEEeCCCccc-cHHHHHHHhcCCCceEeecccCCCcEeeCCeEEEEeCCCcccccCCCccccccchHhhh
Confidence 01123489999986543 344566666642 1133345555555432 2467999
Q ss_pred cccEEEecC--------CCHHHHHHHHH
Q 022641 205 RCAKFRFKP--------LSEEVMSSRVL 224 (294)
Q Consensus 205 r~~~i~~~~--------~~~~~~~~~l~ 224 (294)
|+..+.|.. +..+++..++.
T Consensus 221 R~~~~~F~~~~p~~~~~i~~~e~k~f~~ 248 (267)
T d1u0ja_ 221 RMFKFELTRRLDHDFGKVTKQEVKDFFR 248 (267)
T ss_dssp TEEEEECCSCCCTTSCCCCHHHHHHHHH
T ss_pred hEEEEECCCcCCCccCCCCHHHHHHHHH
Confidence 998877753 33455555553
No 60
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.92 E-value=1.3e-05 Score=60.57 Aligned_cols=96 Identities=23% Similarity=0.233 Sum_probs=50.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhh---hcccCccCCC-----------
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAV---AVGSGQRRGG----------- 150 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----------- 150 (294)
++|+||+|+||||++.-||..+... +..+..+.+...+... . +.+..+... ..........
T Consensus 13 i~lvGp~GvGKTTTiaKLA~~~~~~---g~kV~lit~Dt~R~gA-~-eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~ 87 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAKLALYYKGK---GRRPLLVAADTQRPAA-R-EQLRLLGEKVGVPVLEVMDGESPESIRRRVEEK 87 (207)
T ss_dssp EEEECCTTTTHHHHHHHHHHHHHHT---TCCEEEEECCSSCHHH-H-HHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC---CCcEEEEecccccchH-H-HHHHHHHHhcCCccccccccchhhHHHHHHHHH
Confidence 7889999999999999999887432 2333333333322211 1 122222211 1111100000
Q ss_pred CCCCCcEEEEEeCCCCCC--HHHHHHHHHHHHhhcCc
Q 022641 151 YPCPPYKIIILDEADSMT--EDAQNALRRTMETYSKV 185 (294)
Q Consensus 151 ~~~~~~~lliiDei~~l~--~~~~~~L~~~l~~~~~~ 185 (294)
......++|+||=+++.+ ......|..+.+.....
T Consensus 88 ~~~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~ 124 (207)
T d1ls1a2 88 ARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPD 124 (207)
T ss_dssp HHHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCS
T ss_pred HhhccCcceeecccccchhhhhhHHHHHHHHhhcCCc
Confidence 012345799999998764 45566666666554443
No 61
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.92 E-value=3.2e-06 Score=62.85 Aligned_cols=23 Identities=35% Similarity=0.583 Sum_probs=21.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+|+|.||||+||||+++.|++.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999998
No 62
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.91 E-value=2e-06 Score=64.75 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=23.0
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+..|+|.||||+||||+++.|++.+
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 33458999999999999999999988
No 63
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.89 E-value=2.9e-06 Score=63.60 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=23.0
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.+|+|.||||+||||+++.|++.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~ 27 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKY 27 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3469999999999999999999998
No 64
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.89 E-value=1.8e-05 Score=59.82 Aligned_cols=146 Identities=15% Similarity=0.097 Sum_probs=65.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcc--hhHHHHHHHHHHhhhcccCccCCCC----------
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRG--INVVRTKIKTFAAVAVGSGQRRGGY---------- 151 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------- 151 (294)
.++|+||+|+||||++--||..+... +..+..+.....+. ...++.. .................
T Consensus 14 vi~lvGptGvGKTTTiAKLA~~~~~~---g~kV~lit~Dt~R~ga~eQL~~~-a~~l~v~~~~~~~~~~~~~~~~~a~~~ 89 (211)
T d1j8yf2 14 VIMLVGVQGTGKATTAGKLAYFYKKK---GFKVGLVGADVYRPAALEQLQQL-GQQIGVPVYGEPGEKDVVGIAKRGVEK 89 (211)
T ss_dssp EEEEECSCCC----HHHHHHHHHHHT---TCCEEEEECCCSSHHHHHHHHHH-HHHHTCCEECCTTCCCHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC---CCceEEEEeeccccchhHHHHHh-ccccCcceeecccchhhhHHHHHHHHH
Confidence 37889999999999999999877422 22333333333222 2222211 11111111111111000
Q ss_pred -CCCCcEEEEEeCCCCCCH----HHHHHHHHHHHhhcC-cceEEEEecCCcccchHhhccc-----cEEEecCCCHHHHH
Q 022641 152 -PCPPYKIIILDEADSMTE----DAQNALRRTMETYSK-VTRFFFICNYISRIIEPLASRC-----AKFRFKPLSEEVMS 220 (294)
Q Consensus 152 -~~~~~~lliiDei~~l~~----~~~~~L~~~l~~~~~-~~~ii~~~~~~~~~~~~l~~r~-----~~i~~~~~~~~~~~ 220 (294)
.....++|+||=+++.+. .....+..+.+.... ...+++.++........+..++ .-+-+..++.....
T Consensus 90 ~~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI~TKlDet~~~ 169 (211)
T d1j8yf2 90 FLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQASKIGTIIITKMDGTAKG 169 (211)
T ss_dssp HHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHHHHHCTTEEEEEECTTSCSCH
T ss_pred hhccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhhhhcccCcceEEEecccCCCcc
Confidence 123457999999987532 123445555554433 3334444443333233333322 23556666665544
Q ss_pred HHHHHHHHHhCCC
Q 022641 221 SRVLHICNEEGLN 233 (294)
Q Consensus 221 ~~l~~~~~~~~~~ 233 (294)
--+-..+...+++
T Consensus 170 G~~l~~~~~~~lP 182 (211)
T d1j8yf2 170 GGALSAVAATGAT 182 (211)
T ss_dssp HHHHHHHHTTTCC
T ss_pred cHHHHHHHHHCcC
Confidence 4444444444443
No 65
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.89 E-value=5.6e-06 Score=62.85 Aligned_cols=23 Identities=35% Similarity=0.525 Sum_probs=21.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++|+||+|+||||++.-||..+.
T Consensus 14 i~lvGptGvGKTTTiAKLAa~~~ 36 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGKLAKMFV 36 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 78999999999999999998874
No 66
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=97.88 E-value=5e-05 Score=58.71 Aligned_cols=44 Identities=25% Similarity=0.385 Sum_probs=33.4
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhcCcceEEEEecCCcc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYSKVTRFFFICNYISR 197 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~ 197 (294)
.++.++++||.- .|++.....+.+.+........+|++|.+...
T Consensus 156 ~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~ 200 (241)
T d2pmka1 156 NNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLST 200 (241)
T ss_dssp TCCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGG
T ss_pred cccchhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 567899999975 57888888888888776666678888876543
No 67
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.87 E-value=5.3e-06 Score=62.18 Aligned_cols=24 Identities=38% Similarity=0.699 Sum_probs=22.0
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..++|.||||+||||+++.|++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 358899999999999999999998
No 68
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=97.85 E-value=4.6e-06 Score=61.03 Aligned_cols=25 Identities=36% Similarity=0.412 Sum_probs=22.9
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
|.+.|+|++|+|||||++.+++.+.
T Consensus 3 Pvi~itG~~GSGKTTL~~~L~~~l~ 27 (170)
T d1np6a_ 3 PLLAFAAWSGTGKTTLLKKLIPALC 27 (170)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999873
No 69
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.84 E-value=5.4e-06 Score=62.45 Aligned_cols=24 Identities=25% Similarity=0.497 Sum_probs=22.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.++|.||||+||||+|+.|++.+
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 458999999999999999999987
No 70
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.82 E-value=4.9e-06 Score=62.40 Aligned_cols=24 Identities=33% Similarity=0.547 Sum_probs=21.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.|+|+|+||+||||+|+.|++.+.
T Consensus 21 vI~L~G~pGSGKTTiAk~La~~l~ 44 (195)
T d1x6va3 21 TVWLTGLSGAGKTTVSMALEEYLV 44 (195)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 377999999999999999999883
No 71
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.79 E-value=8.1e-06 Score=61.11 Aligned_cols=24 Identities=29% Similarity=0.526 Sum_probs=22.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
-.++|.||||+||||+++.|+..+
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHB
T ss_pred eeEEEECCCCCCHHHHHHHHHHHH
Confidence 458999999999999999999987
No 72
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.78 E-value=5.1e-05 Score=58.12 Aligned_cols=43 Identities=9% Similarity=0.164 Sum_probs=29.1
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhh--cCcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETY--SKVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~--~~~~~ii~~~~~~~ 196 (294)
.++.+|++||-- .|++.....+...+.+. .....+|++|.+..
T Consensus 147 ~~P~illlDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~ 192 (232)
T d2awna2 147 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV 192 (232)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHH
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 467799999964 57777766666666543 24566778876543
No 73
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.78 E-value=7.1e-05 Score=58.32 Aligned_cols=43 Identities=21% Similarity=0.376 Sum_probs=32.9
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhcCcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYSKVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~ 196 (294)
.++.++++||.- .|++.....+.+.+........+|++|.+..
T Consensus 171 ~~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~ 214 (255)
T d2hyda1 171 NNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLS 214 (255)
T ss_dssp HCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGG
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 356799999975 5778888888888877666666788886654
No 74
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.77 E-value=9.4e-06 Score=60.30 Aligned_cols=23 Identities=35% Similarity=0.600 Sum_probs=21.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+|+|.||||+||||+++.|++.+
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48899999999999999999998
No 75
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=97.76 E-value=0.00012 Score=57.00 Aligned_cols=43 Identities=23% Similarity=0.405 Sum_probs=32.1
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhcCcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYSKVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~ 196 (294)
.++.++++||.- .|++.....+++.+........+|++|.+..
T Consensus 169 ~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~ 212 (253)
T d3b60a1 169 RDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 212 (253)
T ss_dssp HCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGG
T ss_pred cCCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHH
Confidence 356799999975 5678777788888877666666788886654
No 76
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.76 E-value=7.3e-06 Score=61.62 Aligned_cols=24 Identities=29% Similarity=0.510 Sum_probs=22.3
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.|+|.||||+||||+++.|++.+
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 468999999999999999999987
No 77
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76 E-value=8.5e-06 Score=61.17 Aligned_cols=24 Identities=29% Similarity=0.488 Sum_probs=22.3
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.|+|.||||+||||.|+.|++.+
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 358999999999999999999988
No 78
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.74 E-value=9.3e-06 Score=60.25 Aligned_cols=23 Identities=39% Similarity=0.790 Sum_probs=21.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|.||||+||||+++.|+..+
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999999998
No 79
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.72 E-value=8.7e-06 Score=60.31 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=21.6
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++|.||||+||||.++.|++.+
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~ 24 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKY 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999999998
No 80
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.72 E-value=1.2e-05 Score=61.58 Aligned_cols=25 Identities=40% Similarity=0.628 Sum_probs=22.9
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|.|.|.||||+||||+++.|++.+
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 3568888999999999999999998
No 81
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.71 E-value=9.4e-05 Score=56.82 Aligned_cols=43 Identities=9% Similarity=0.228 Sum_probs=30.7
Q ss_pred CCcEEEEEeCC-CCCCHHHHHHHHHHHHhhc--CcceEEEEecCCc
Q 022641 154 PPYKIIILDEA-DSMTEDAQNALRRTMETYS--KVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei-~~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~ 196 (294)
.++.+|++||- -.+++.....+.+.+.+.. ....+|++|.+..
T Consensus 153 ~~P~iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~ 198 (239)
T d1v43a3 153 VEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQV 198 (239)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred cCCCceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence 56789999995 4678877777777776643 2566788886644
No 82
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.70 E-value=0.00011 Score=59.48 Aligned_cols=38 Identities=21% Similarity=0.434 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 67 EEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 67 ~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.....+..++..+. |++++||+|+||||+++++....
T Consensus 153 ~~~~~~l~~~v~~~~--nili~G~tgSGKTT~l~al~~~i 190 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGK--NVIVCGGTGSGKTTYIKSIMEFI 190 (323)
T ss_dssp HHHHHHHHHHHHHTC--CEEEEESTTSSHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHhCC--CEEEEeeccccchHHHHHHhhhc
Confidence 455566666676665 79999999999999999998766
No 83
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=97.66 E-value=4.9e-05 Score=58.76 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhcC-cceEEEEecCCcccchHhhccc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYSK-VTRFFFICNYISRIIEPLASRC 206 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~~-~~~ii~~~~~~~~~~~~l~~r~ 206 (294)
.++.+|++||-- .+++.....+.+++.+... ...+++++.+.... ..+.+|+
T Consensus 156 ~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~-~~~~drv 209 (240)
T d1ji0a_ 156 SRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGA-LKVAHYG 209 (240)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHCSEE
T ss_pred hCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHhCCEE
Confidence 567899999964 6788888888777776433 45577777654322 2444444
No 84
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.64 E-value=1.7e-05 Score=58.85 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=22.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.|+|.|+||+||||+++.|++.+.
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999883
No 85
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=97.63 E-value=0.00036 Score=53.35 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=39.8
Q ss_pred cchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 59 QVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 59 ~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|..-..|......+...+..+...+.+|+|.+|+|||-++-..+...
T Consensus 53 P~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~ 100 (233)
T d2eyqa3 53 PFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLA 100 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHH
Confidence 344455678888899999999988889999999999999998777665
No 86
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.61 E-value=3.1e-05 Score=58.25 Aligned_cols=23 Identities=39% Similarity=0.444 Sum_probs=18.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.++++|+|+|||.++..++...
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~ 47 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYR 47 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEEeCCCCcHHHHHHHHHHHH
Confidence 68999999999998766665443
No 87
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.58 E-value=4.5e-05 Score=56.93 Aligned_cols=22 Identities=32% Similarity=0.359 Sum_probs=20.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|.||+|+||||+|+.|+..+
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l 46 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTL 46 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6699999999999999999877
No 88
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.58 E-value=2.3e-05 Score=60.00 Aligned_cols=22 Identities=36% Similarity=0.593 Sum_probs=20.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|.||||+||||+|+.|+..+
T Consensus 6 IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5677999999999999999998
No 89
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.57 E-value=2e-05 Score=59.75 Aligned_cols=22 Identities=27% Similarity=0.481 Sum_probs=20.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|.||+||||+|+.|++.+
T Consensus 5 i~l~GlpgsGKSTla~~L~~~l 26 (213)
T d1bifa1 5 IVMVGLPARGKTYISKKLTRYL 26 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 8899999999999999999877
No 90
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.52 E-value=0.00038 Score=53.98 Aligned_cols=43 Identities=16% Similarity=0.271 Sum_probs=31.3
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhcC--cceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYSK--VTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~~--~~~ii~~~~~~~ 196 (294)
.++.++++||.- .+++.....+.+.+.+... ...+|++|.+..
T Consensus 168 ~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~ 213 (251)
T d1jj7a_ 168 RKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLS 213 (251)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHH
T ss_pred cCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHH
Confidence 567899999974 6788888888888876443 456777776643
No 91
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.49 E-value=5.3e-05 Score=57.38 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=25.1
Q ss_pred HHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 76 TLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 76 ~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.....++..|+|+|.||+||||+|+.|++.+
T Consensus 18 ~~~~~kg~vIwltGlsGsGKTTia~~L~~~l 48 (208)
T d1m7ga_ 18 ELRNQRGLTIWLTGLSASGKSTLAVELEHQL 48 (208)
T ss_dssp HHHTSSCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHhCCCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 3444444469999999999999999999876
No 92
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=97.47 E-value=0.00025 Score=54.57 Aligned_cols=43 Identities=14% Similarity=0.182 Sum_probs=29.6
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc-CcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS-KVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~-~~~~ii~~~~~~~ 196 (294)
.++.+|++||.- .+++.....+.+++.+.. ....++++|.+..
T Consensus 150 ~~p~illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~ 194 (238)
T d1vpla_ 150 VNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNML 194 (238)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred cCCCEEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 567799999964 577777777777776543 3456777775543
No 93
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.46 E-value=0.0011 Score=55.20 Aligned_cols=49 Identities=20% Similarity=0.283 Sum_probs=38.4
Q ss_pred CcchhhcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 58 KQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 58 ~~~~~~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++.++--.+.....+.+++.... .-++|+||+|+||||++.++.+.+.
T Consensus 135 ~~l~~LG~~~~~~~~l~~l~~~~~-GliLvtGpTGSGKSTTl~~~l~~~~ 183 (401)
T d1p9ra_ 135 LDLHSLGMTAHNHDNFRRLIKRPH-GIILVTGPTGSGKSTTLYAGLQELN 183 (401)
T ss_dssp CCGGGSCCCHHHHHHHHHHHTSSS-EEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred hhhhhhcccHHHHHHHHHHHhhhh-ceEEEEcCCCCCccHHHHHHhhhhc
Confidence 456666666777777777765543 3599999999999999999999884
No 94
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=97.45 E-value=3e-05 Score=57.67 Aligned_cols=23 Identities=30% Similarity=0.432 Sum_probs=21.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|.|++|+||||+++.|++.+
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L 25 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEIL 25 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37889999999999999999998
No 95
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.44 E-value=7.6e-05 Score=56.19 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=25.3
Q ss_pred CcEEEEEeCCCCCCH----HHHHHHHHHHHhhcCcceEEEEe
Q 022641 155 PYKIIILDEADSMTE----DAQNALRRTMETYSKVTRFFFIC 192 (294)
Q Consensus 155 ~~~lliiDei~~l~~----~~~~~L~~~l~~~~~~~~ii~~~ 192 (294)
..++||+||+|.+.. ...+.++..+.....+..+++.|
T Consensus 138 ~~~~ii~DE~h~~~~~~r~~~~~~~l~~i~~~~~~~~~l~lS 179 (202)
T d2p6ra3 138 AVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLS 179 (202)
T ss_dssp GCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hhhhccccHHHHhcccccchHHHHHHHHHHhcCCCCcEEEEc
Confidence 456999999998742 23455666666666666666655
No 96
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.42 E-value=4.7e-05 Score=56.84 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=21.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|+|+||+|+|||++++.|+...
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~ 24 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEH 24 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHhC
Confidence 38899999999999999999886
No 97
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.42 E-value=4e-05 Score=56.99 Aligned_cols=23 Identities=30% Similarity=0.525 Sum_probs=21.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|+|+||+|+|||++++.|+++.
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~ 25 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHC
T ss_pred eEEEECCCCCCHHHHHHHHHHhC
Confidence 48999999999999999999886
No 98
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=97.41 E-value=0.00012 Score=56.54 Aligned_cols=23 Identities=30% Similarity=0.471 Sum_probs=21.0
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+.|+||+|+|||||++.++..+
T Consensus 30 ~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 30 IIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHHhh
Confidence 59999999999999999998765
No 99
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.31 E-value=7.2e-05 Score=55.32 Aligned_cols=23 Identities=22% Similarity=0.518 Sum_probs=21.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||+|+||||+++.|....
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~ 26 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERI 26 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhhC
Confidence 58999999999999999998886
No 100
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.27 E-value=0.0043 Score=44.44 Aligned_cols=22 Identities=18% Similarity=0.407 Sum_probs=20.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|++|||||+|+..+...-
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999998754
No 101
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=97.22 E-value=0.00031 Score=53.86 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=31.8
Q ss_pred CcEEEEEeCC-CCCCHHHHHHHHHHHHhhc-CcceEEEEecCCcccchHhhcccc
Q 022641 155 PYKIIILDEA-DSMTEDAQNALRRTMETYS-KVTRFFFICNYISRIIEPLASRCA 207 (294)
Q Consensus 155 ~~~lliiDei-~~l~~~~~~~L~~~l~~~~-~~~~ii~~~~~~~~~~~~l~~r~~ 207 (294)
.+.+|++||- ..|+......+.+++.... ....+++++.+... ...+.+|+.
T Consensus 150 ~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl~~-~~~~~dri~ 203 (231)
T d1l7vc_ 150 AGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNH-TLRHAHRAW 203 (231)
T ss_dssp TCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHH-HHHHCSBCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHHHCCEEE
Confidence 4479999995 4677777777777776543 34456666654332 234445543
No 102
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.22 E-value=0.00024 Score=51.37 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=19.1
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
++|+|++|+|||+|+..+...
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988764
No 103
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=97.17 E-value=0.00056 Score=49.00 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=19.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|+|+||+|||+|..++...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999998754
No 104
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.17 E-value=0.00013 Score=52.96 Aligned_cols=24 Identities=21% Similarity=0.047 Sum_probs=21.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+.|+|++|+|||||+..++..+.
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L~ 26 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAAV 26 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHH
Confidence 367999999999999999999884
No 105
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.16 E-value=0.0012 Score=51.23 Aligned_cols=52 Identities=13% Similarity=0.163 Sum_probs=33.3
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc-CcceEEEEecCCcccchHhhccc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS-KVTRFFFICNYISRIIEPLASRC 206 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~-~~~~ii~~~~~~~~~~~~l~~r~ 206 (294)
.++.+|++||-- .+++.....+++.+.+.. ....+++++.+...+ ..+.+|.
T Consensus 167 ~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~-~~~~Drv 220 (254)
T d1g6ha_ 167 TNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIV-LNYIDHL 220 (254)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTT-GGGCSEE
T ss_pred hCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHH-HHhCCEE
Confidence 467799999964 577777777777776543 345677777554432 2444544
No 106
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=97.15 E-value=0.00039 Score=49.55 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=22.0
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|.|+=|+|||++++.+++.+-
T Consensus 35 ii~L~G~LGaGKTtfvr~~~~~lg 58 (158)
T d1htwa_ 35 MVYLNGDLGAGKTTLTRGMLQGIG 58 (158)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEEecCCCccHHHHHHHHHhhcc
Confidence 388999999999999999999983
No 107
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.14 E-value=0.00033 Score=54.64 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=36.4
Q ss_pred cccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 64 AHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 64 ~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
-.|..++..+..-+..+...+-+|.|..|+|||-++-..+...
T Consensus 86 ~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~ 128 (264)
T d1gm5a3 86 NAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDN 128 (264)
T ss_dssp HHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHH
Confidence 3677888888888888888889999999999999987776554
No 108
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=97.14 E-value=0.002 Score=46.67 Aligned_cols=25 Identities=20% Similarity=0.274 Sum_probs=20.9
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHH
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~ 105 (294)
+.-.++|+|.+|+|||+|+..+...
T Consensus 14 k~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 14 QEHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred CeEEEEEECCCCCCHHHHHHHHhcC
Confidence 3345999999999999999988654
No 109
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.13 E-value=0.00091 Score=48.43 Aligned_cols=23 Identities=22% Similarity=0.504 Sum_probs=20.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++++|++|||||+|+..+...-+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~~f 31 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVKGQF 31 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 89999999999999999986543
No 110
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07 E-value=0.00017 Score=53.01 Aligned_cols=23 Identities=13% Similarity=0.369 Sum_probs=21.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||+|+|||++.+.|.++.
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHC
T ss_pred cEEEECCCCCCHHHHHHHHHHhC
Confidence 58999999999999999998875
No 111
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.07 E-value=0.0002 Score=53.90 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=21.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||+|+|||+|.+.|....
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhhC
Confidence 58999999999999999999885
No 112
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=0.00018 Score=54.44 Aligned_cols=22 Identities=23% Similarity=0.347 Sum_probs=20.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|+||+|+||||+++.|+..+
T Consensus 5 IgI~G~~gSGKSTla~~L~~~l 26 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVCAKIVQLL 26 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6699999999999999999987
No 113
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.02 E-value=0.0019 Score=46.32 Aligned_cols=22 Identities=23% Similarity=0.374 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|.+|||||+|+..+...-
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7899999999999999987643
No 114
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.01 E-value=0.0019 Score=48.62 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=26.1
Q ss_pred CCCcEEEEEeCCCCCCHH-HHHHHHHHHHhhcCcceEEEEec
Q 022641 153 CPPYKIIILDEADSMTED-AQNALRRTMETYSKVTRFFFICN 193 (294)
Q Consensus 153 ~~~~~lliiDei~~l~~~-~~~~L~~~l~~~~~~~~ii~~~~ 193 (294)
..+-..+++||+|.+... ..+.+.++++..+....+++.|.
T Consensus 149 l~~l~~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SA 190 (212)
T d1qdea_ 149 TDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSA 190 (212)
T ss_dssp CTTCCEEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEES
T ss_pred cCcceEEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEe
Confidence 345668999999987432 34556666666665555555543
No 115
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99 E-value=0.0002 Score=52.83 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=20.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|.+|||||+|+..+...-
T Consensus 8 ivviG~~~vGKTsli~~~~~~~ 29 (183)
T d1mh1a_ 8 CVVVGDGAVGKTCLLISYTTNA 29 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999987754
No 116
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.96 E-value=0.003 Score=47.72 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=27.1
Q ss_pred CCcEEEEEeCCCCCCHH-HHHHHHHHHHhhcCcceEEEEecC
Q 022641 154 PPYKIIILDEADSMTED-AQNALRRTMETYSKVTRFFFICNY 194 (294)
Q Consensus 154 ~~~~lliiDei~~l~~~-~~~~L~~~l~~~~~~~~ii~~~~~ 194 (294)
..-..+++||+|.+... ..+.+..+++..+....+++.+..
T Consensus 154 ~~l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT 195 (218)
T d2g9na1 154 KYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSAT 195 (218)
T ss_dssp TTCCEEEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESC
T ss_pred ccceEEEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEec
Confidence 34569999999987432 345566666666666666666543
No 117
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.94 E-value=0.00043 Score=50.05 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=20.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|.|++|||||+|+..+...-
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~~~ 28 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVEGQ 28 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCcCHHHHHHHHHhCC
Confidence 38999999999999999987643
No 118
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.93 E-value=0.00027 Score=50.51 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=20.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++|+|+||||||+|+..+...-+
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~~ 25 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGEI 25 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhcCCC
Confidence 78999999999999999987653
No 119
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.0016 Score=46.77 Aligned_cols=22 Identities=18% Similarity=0.475 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|||||+|+..+...-
T Consensus 6 i~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999987654
No 120
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=96.91 E-value=0.0026 Score=45.78 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+++..+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987643
No 121
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.89 E-value=0.0014 Score=47.56 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|.+|||||+|+..+...-
T Consensus 9 v~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 9999999999999999887654
No 122
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.89 E-value=0.0055 Score=45.73 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred CCcEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEe
Q 022641 154 PPYKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFIC 192 (294)
Q Consensus 154 ~~~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~ 192 (294)
..-..+++||+|.+- .+..+.+..+++..+....+++.|
T Consensus 142 ~~l~~lV~DEaD~l~~~~f~~~v~~I~~~l~~~~Q~il~S 181 (206)
T d1s2ma1 142 SDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 181 (206)
T ss_dssp TTCCEEEEESHHHHSSHHHHHHHHHHHTTSCSSCEEEEEE
T ss_pred ccceEEEeechhhhhhhhhHHHHHHHHHhCCCCCEEEEEE
Confidence 445589999999875 345566677776666655555554
No 123
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.88 E-value=0.033 Score=40.04 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=19.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.|+|+|.+|+|||+|+..+...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5999999999999999998754
No 124
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.85 E-value=0.00055 Score=52.62 Aligned_cols=23 Identities=22% Similarity=0.236 Sum_probs=20.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||||+|||+++..++...
T Consensus 36 ~~li~G~pGsGKT~l~lq~~~~~ 58 (251)
T d1szpa2 36 ITELFGEFRTGKSQLCHTLAVTC 58 (251)
T ss_dssp EEEEEESTTSSHHHHHHHHTTTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHh
Confidence 49999999999999999887654
No 125
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.84 E-value=0.0055 Score=46.71 Aligned_cols=24 Identities=25% Similarity=0.235 Sum_probs=21.4
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.++|+||.+.|||++++.++-..
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~~ 65 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALIA 65 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHHHH
Confidence 458999999999999999988765
No 126
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.84 E-value=0.00053 Score=55.33 Aligned_cols=27 Identities=33% Similarity=0.412 Sum_probs=23.2
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
+...|-|+||||+|||||+..++..+.
T Consensus 53 ~~~~IgitG~pGaGKSTLi~~l~~~~~ 79 (327)
T d2p67a1 53 NTLRLGVTGTPGAGKSTFLEAFGMLLI 79 (327)
T ss_dssp CSEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CceEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 334499999999999999999998874
No 127
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.84 E-value=0.00011 Score=53.89 Aligned_cols=23 Identities=22% Similarity=0.381 Sum_probs=20.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
+++.|++|+|||+|+..+...-+
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~~f 27 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKDQF 27 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 89999999999999998877543
No 128
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.83 E-value=0.00059 Score=51.46 Aligned_cols=26 Identities=27% Similarity=0.234 Sum_probs=22.6
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGP 109 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~ 109 (294)
.++|+||||+|||+++..++......
T Consensus 25 v~~i~G~~GsGKT~l~l~la~~~~~~ 50 (242)
T d1n0wa_ 25 ITEMFGEFRTGKTQICHTLAVTCQLP 50 (242)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTSC
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 49999999999999999999877443
No 129
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.83 E-value=0.00031 Score=53.56 Aligned_cols=42 Identities=10% Similarity=0.194 Sum_probs=30.1
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc--CcceEEEEecCC
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS--KVTRFFFICNYI 195 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~ 195 (294)
.++.+|++||.- .|++.....+.+.+.+.. ....+|++|.+.
T Consensus 162 ~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~ 206 (230)
T d1l2ta_ 162 NNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDI 206 (230)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCH
T ss_pred cCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCH
Confidence 567799999964 577877777777777643 356677887653
No 130
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.82 E-value=0.0033 Score=47.04 Aligned_cols=39 Identities=23% Similarity=0.371 Sum_probs=25.2
Q ss_pred CCcEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEe
Q 022641 154 PPYKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFIC 192 (294)
Q Consensus 154 ~~~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~ 192 (294)
..-..+|+||+|.+. .+..+.+..+++..+....+++.|
T Consensus 145 ~~l~~lVlDEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~S 184 (206)
T d1veca_ 145 DHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 184 (206)
T ss_dssp TTCCEEEEETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEE
T ss_pred cccceEEEeccccccccchHHHHHHHHHhCCCCCEEEEEE
Confidence 445699999999764 334455666666666655555555
No 131
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81 E-value=0.0025 Score=45.79 Aligned_cols=23 Identities=22% Similarity=0.589 Sum_probs=20.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++++|.+|||||+|+..+...-+
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~f 28 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGIF 28 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHcCCC
Confidence 89999999999999999876543
No 132
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.80 E-value=0.00088 Score=51.72 Aligned_cols=24 Identities=21% Similarity=0.101 Sum_probs=21.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcC
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFG 108 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~ 108 (294)
++|+||||+|||+++..++.....
T Consensus 40 ~~i~G~~GsGKT~lalq~~~~~~~ 63 (258)
T d1v5wa_ 40 TEAFGEFRTGKTQLSHTLCVTAQL 63 (258)
T ss_dssp EEEECCTTCTHHHHHHHHHHHTTS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999987643
No 133
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=96.76 E-value=0.00044 Score=50.60 Aligned_cols=22 Identities=27% Similarity=0.459 Sum_probs=19.2
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|+|++|+|||+|...+...
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3999999999999999888543
No 134
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.75 E-value=0.00044 Score=53.50 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=21.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++|+||||+|||+++..++....
T Consensus 39 ~li~G~pGsGKT~~~lq~~~~~~ 61 (254)
T d1pzna2 39 TEVFGEFGSGKTQLAHTLAVMVQ 61 (254)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999998764
No 135
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.75 E-value=0.00052 Score=51.96 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHH
Q 022641 70 VRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 70 ~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~ 105 (294)
++.|..++. ....+|.|++|+|||||+.+|...
T Consensus 86 ~~~L~~~l~---~kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 86 IEELKEYLK---GKISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp HHHHHHHHS---SSEEEEECSTTSSHHHHHHHHSTT
T ss_pred HhhHHHHhc---CCeEEEECCCCCCHHHHHHhhcch
Confidence 455666563 235899999999999999998543
No 136
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=96.75 E-value=0.00044 Score=53.21 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=20.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||||+..+.+.+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 7899999999999999999876
No 137
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.74 E-value=0.00071 Score=53.29 Aligned_cols=22 Identities=41% Similarity=0.836 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|-|.|++|+||||++..+...+
T Consensus 30 IGi~G~qGSGKSTl~~~l~~~L 51 (286)
T d1odfa_ 30 IFFSGPQGSGKSFTSIQIYNHL 51 (286)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEeECCCCCCHHHHHHHHHHHH
Confidence 5689999999999999887776
No 138
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.72 E-value=0.00042 Score=53.04 Aligned_cols=43 Identities=9% Similarity=0.136 Sum_probs=29.2
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc--CcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS--KVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~ 196 (294)
.++.+|++||-- .+++.....+.+.+.+.. ....+|++|.+..
T Consensus 143 ~~P~illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~ 188 (240)
T d2onka1 143 IQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLI 188 (240)
T ss_dssp TCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHH
T ss_pred ccCCceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence 467799999964 577777777777776543 2455777776543
No 139
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=96.69 E-value=0.00053 Score=52.60 Aligned_cols=43 Identities=7% Similarity=0.160 Sum_probs=30.5
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc--CcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS--KVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~ 196 (294)
.++.+|++||.- .+++.....+.+.+.+.. ....+|++|.+..
T Consensus 156 ~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~ 201 (240)
T d1g2912 156 RKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQV 201 (240)
T ss_dssp TCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred cCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHH
Confidence 467799999964 578877777777776543 2566788886643
No 140
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=96.68 E-value=0.0005 Score=49.40 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=20.2
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+|+||||||+|+..+...-
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 38999999999999999987653
No 141
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68 E-value=0.0017 Score=47.14 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|.+|+|||+++..+...-
T Consensus 8 I~lvG~~~vGKTsll~~~~~~~ 29 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIEKK 29 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887643
No 142
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.67 E-value=0.00022 Score=52.45 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|.|++|+|||+|+..+...-
T Consensus 5 ivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999887754
No 143
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=96.66 E-value=0.0012 Score=53.07 Aligned_cols=24 Identities=38% Similarity=0.455 Sum_probs=21.7
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+-|+||||+||||++..+++.+
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHH
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHH
Confidence 349999999999999999999876
No 144
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=96.66 E-value=0.00049 Score=51.47 Aligned_cols=24 Identities=42% Similarity=0.524 Sum_probs=21.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.|.||.|+||||+++.++..+
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCChHHHHHHHHhccc
Confidence 358999999999999999998765
No 145
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=96.65 E-value=0.0058 Score=46.20 Aligned_cols=23 Identities=30% Similarity=0.262 Sum_probs=20.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|+||...|||++++.++-..
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ 59 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIA 59 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHHHH
Confidence 48999999999999999887765
No 146
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.63 E-value=0.00056 Score=52.61 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=22.0
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|+||||+|||+++..++..+.
T Consensus 28 l~li~G~pGsGKT~l~~qia~~~~ 51 (242)
T d1tf7a2 28 IILATGATGTGKTLLVSRFVENAC 51 (242)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHH
Confidence 499999999999999999999874
No 147
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.63 E-value=0.0076 Score=45.51 Aligned_cols=41 Identities=22% Similarity=0.347 Sum_probs=27.2
Q ss_pred CCCcEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEec
Q 022641 153 CPPYKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFICN 193 (294)
Q Consensus 153 ~~~~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~~ 193 (294)
...-..+++||+|.+- ....+.+..+++..+....+++.+.
T Consensus 157 ~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSA 198 (222)
T d2j0sa1 157 TRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISA 198 (222)
T ss_dssp CTTCCEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEES
T ss_pred cccceeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEE
Confidence 3455699999999764 3345566677776666666666553
No 148
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.62 E-value=0.0006 Score=51.09 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=22.1
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|.++|+|+||+|||+|+..|...-
T Consensus 3 ~p~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 3 QPSIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCC
Confidence 4679999999999999999998764
No 149
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.62 E-value=0.0006 Score=48.68 Aligned_cols=22 Identities=32% Similarity=0.462 Sum_probs=19.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|+||+|||+|+..+...-
T Consensus 3 I~liG~~nvGKSSLln~l~~~~ 24 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKNDR 24 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 8999999999999999988753
No 150
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59 E-value=0.00062 Score=49.55 Aligned_cols=22 Identities=23% Similarity=0.439 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|||||+|+..+...-
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDKR 27 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHhcCC
Confidence 8999999999999999887653
No 151
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=96.58 E-value=0.006 Score=48.22 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=13.9
Q ss_pred CCcEEEECCCCCCHHH
Q 022641 82 CPHMLFYGPPGTGKTT 97 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~ 97 (294)
.+++++.+|+|+|||+
T Consensus 9 ~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 9 KRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TCEEEECCCTTSSTTT
T ss_pred CCcEEEEECCCCCHHH
Confidence 3479999999999995
No 152
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.57 E-value=0.00069 Score=49.13 Aligned_cols=22 Identities=32% Similarity=0.326 Sum_probs=17.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+|+..+...-
T Consensus 6 i~vvG~~~vGKTsli~~~~~~~ 27 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGE 27 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC---
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999998876543
No 153
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=96.56 E-value=0.0005 Score=52.73 Aligned_cols=24 Identities=21% Similarity=0.188 Sum_probs=21.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.|.||+|+||||+++.++...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 459999999999999999997754
No 154
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.56 E-value=0.0007 Score=50.79 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=20.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+|+|.|+||+|||+|+..+...-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHcCC
Confidence 69999999999999999998753
No 155
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=96.56 E-value=0.0014 Score=52.12 Aligned_cols=22 Identities=32% Similarity=0.391 Sum_probs=20.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|.|++|+||||+++.|...+
T Consensus 83 IGIaG~sgSGKSTla~~L~~lL 104 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTARVLQALL 104 (308)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCcHHHHHHHHHH
Confidence 7899999999999999999987
No 156
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.56 E-value=0.0043 Score=46.38 Aligned_cols=39 Identities=18% Similarity=0.249 Sum_probs=25.0
Q ss_pred CcEEEEEeCCCCCCHH-HHHHHHHHHHhhcCcceEEEEec
Q 022641 155 PYKIIILDEADSMTED-AQNALRRTMETYSKVTRFFFICN 193 (294)
Q Consensus 155 ~~~lliiDei~~l~~~-~~~~L~~~l~~~~~~~~ii~~~~ 193 (294)
.-..++|||+|.+... ..+.+..++...+....+++.|.
T Consensus 147 ~l~~lViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SA 186 (209)
T d1q0ua_ 147 TAHILVVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSA 186 (209)
T ss_dssp GCCEEEECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEES
T ss_pred cceEEEEeecccccccccHHHHHHHHHHCCCCCEEEEEEc
Confidence 4458999999987543 23445556666566666666553
No 157
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=96.54 E-value=0.0018 Score=51.92 Aligned_cols=19 Identities=26% Similarity=0.356 Sum_probs=15.9
Q ss_pred cEEEECCCCCCHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAI 102 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~l 102 (294)
++++.|+||||||+++-.-
T Consensus 26 ~~lV~g~aGSGKTt~l~~r 44 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHR 44 (318)
T ss_dssp CEEEEECTTSCHHHHHHHH
T ss_pred CEEEEecCCccHHHHHHHH
Confidence 5899999999999877553
No 158
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.54 E-value=0.00025 Score=52.37 Aligned_cols=23 Identities=26% Similarity=0.400 Sum_probs=20.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++|+|.+|+|||+|+..+...-+
T Consensus 12 i~lvG~~~vGKTsLi~r~~~~~f 34 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYANDAF 34 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHHSSC
T ss_pred EEEECCCCCCHHHHHHHHhhCCC
Confidence 89999999999999999876543
No 159
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=96.53 E-value=0.00052 Score=52.22 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=30.6
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHHHHhhc--CcceEEEEecCCc
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRTMETYS--KVTRFFFICNYIS 196 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~ 196 (294)
.++.+|++||-- .+++.....+.+.+.+.. ....+|++|.+..
T Consensus 144 ~~P~iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~ 189 (229)
T d3d31a2 144 TNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQT 189 (229)
T ss_dssp SCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Confidence 567899999964 578877777777776542 3556777886654
No 160
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.49 E-value=0.024 Score=42.09 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=27.1
Q ss_pred CCCcEEEEEeCCCCCC--HHHHHHHHHHHHhhcCcceEEEEec
Q 022641 153 CPPYKIIILDEADSMT--EDAQNALRRTMETYSKVTRFFFICN 193 (294)
Q Consensus 153 ~~~~~lliiDei~~l~--~~~~~~L~~~l~~~~~~~~ii~~~~ 193 (294)
..+-..+++||+|.+- ....+.+..+++..+....+++.+.
T Consensus 143 l~~l~~lVlDEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SA 185 (207)
T d1t6na_ 143 LKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSA 185 (207)
T ss_dssp CTTCCEEEEESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEES
T ss_pred ccccceeehhhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEee
Confidence 3455699999999763 2455566666766666666666553
No 161
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=96.47 E-value=0.00077 Score=49.84 Aligned_cols=20 Identities=30% Similarity=0.405 Sum_probs=17.6
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~ 104 (294)
+.|+|++|+||||+|..+..
T Consensus 6 IgitG~~gSGKstva~~l~~ 25 (191)
T d1uf9a_ 6 IGITGNIGSGKSTVAALLRS 25 (191)
T ss_dssp EEEEECTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 66999999999999999843
No 162
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=96.46 E-value=0.0008 Score=53.59 Aligned_cols=19 Identities=26% Similarity=0.308 Sum_probs=15.7
Q ss_pred CcEEEECCCCCCHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALA 101 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~ 101 (294)
.+++|.|+||||||+++-.
T Consensus 15 ~~~lI~g~aGTGKTt~l~~ 33 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITN 33 (306)
T ss_dssp SEEEECCCTTSCHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHH
Confidence 3589999999999987543
No 163
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.46 E-value=0.00087 Score=48.50 Aligned_cols=22 Identities=27% Similarity=0.395 Sum_probs=19.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+|+..+...-
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~~ 29 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDS 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHcCC
Confidence 8999999999999999987654
No 164
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=96.46 E-value=0.00076 Score=48.53 Aligned_cols=22 Identities=27% Similarity=0.382 Sum_probs=19.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|.|++|+|||+|+..+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 4899999999999999988654
No 165
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.45 E-value=0.00088 Score=48.29 Aligned_cols=22 Identities=18% Similarity=0.314 Sum_probs=19.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|++|+|||+++..+...-
T Consensus 7 ivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987654
No 166
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.42 E-value=0.00097 Score=48.21 Aligned_cols=22 Identities=18% Similarity=0.471 Sum_probs=20.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|||||+|+..+...-
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999998754
No 167
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.41 E-value=0.00049 Score=52.76 Aligned_cols=25 Identities=36% Similarity=0.353 Sum_probs=22.1
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
...+.|.||+|+||||+++.++...
T Consensus 31 Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 31 GERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3469999999999999999998865
No 168
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.41 E-value=0.0004 Score=51.70 Aligned_cols=23 Identities=30% Similarity=0.299 Sum_probs=21.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|+|.|+.|+||||+++.|++.+
T Consensus 11 ~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 11 TVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp EEEEECSTTSCHHHHHHTTGGGT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 48999999999999999999887
No 169
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.38 E-value=0.0056 Score=42.17 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=54.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCC-CcchhHHHHHHHHHHh-hhcccCccCCCCCCCCcEEEEEe
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASD-DRGINVVRTKIKTFAA-VAVGSGQRRGGYPCPPYKIIILD 162 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lliiD 162 (294)
-+++||=.+|||+-+-..++..... +..++.+++.. .+.............. ....... .......+.++|+||
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~---g~~v~~ikp~~D~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~I~ID 80 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIA---QYKCLVIKYAKDTRYSSSFCTHDRNTMEALPACLLR-DVAQEALGVAVIGID 80 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTT---TCCEEEEEETTCCC--------------CEEESSGG-GGHHHHHTCSEEEES
T ss_pred EEEEecccCHHHHHHHHHHHHHHHc---CCcEEEEecccccCCcceeeecCCCcceeeeeechh-hhhhhhcccceEEee
Confidence 5789999999999887777665321 33444454332 2221111100000000 0000000 000001235699999
Q ss_pred CCCCCCHHHHHHHHHHHHhhcCcceEEEEe------cCCcccchHhhccccE
Q 022641 163 EADSMTEDAQNALRRTMETYSKVTRFFFIC------NYISRIIEPLASRCAK 208 (294)
Q Consensus 163 ei~~l~~~~~~~L~~~l~~~~~~~~ii~~~------~~~~~~~~~l~~r~~~ 208 (294)
|++.++ +. ..+...+.. ....|++.+ ..++.-...|...+..
T Consensus 81 EaQFf~-dl-~~~~~~~~~--~~~~Viv~GLd~Df~~~~F~~~~~Ll~~Ad~ 128 (133)
T d1xbta1 81 EGQFFP-DI-VEFCEAMAN--AGKTVIVAALDGTFQRKPFGAILNLVPLAES 128 (133)
T ss_dssp SGGGCT-TH-HHHHHHHHH--TTCEEEEECCSBCTTSSBCTTGGGGGGGCSE
T ss_pred hhHHHH-HH-HHHHHHHHh--cCCcEEEEEeccccccCcchhHHHHHHhcCE
Confidence 999996 33 334444444 334455555 2334444556666553
No 170
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=96.38 E-value=0.001 Score=47.78 Aligned_cols=24 Identities=33% Similarity=0.346 Sum_probs=20.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|.|++|+|||+|+..+...-+
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~~ 27 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQF 27 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCC
T ss_pred EEEEECCCCCCHHHHHHHHHcCCC
Confidence 389999999999999999876543
No 171
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.37 E-value=0.0011 Score=47.88 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=19.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|.+|||||+|+..+...-
T Consensus 6 ivlvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCENK 27 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987644
No 172
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.36 E-value=0.00095 Score=52.58 Aligned_cols=24 Identities=29% Similarity=0.474 Sum_probs=21.6
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.|+||+|+|||||++.++..+
T Consensus 63 e~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 63 EMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhCCC
Confidence 359999999999999999998766
No 173
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=96.35 E-value=0.0052 Score=48.32 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=31.0
Q ss_pred hcccHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 63 VAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 63 ~~g~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.-++-..+.+..++..++ .++.-|+|+|||.++..+++.+
T Consensus 112 ~~~rdyQ~~av~~~l~~~~---~il~~pTGsGKT~i~~~i~~~~ 152 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVNRR---RILNLPTSAGRSLIQALLARYY 152 (282)
T ss_dssp CCCCHHHHHHHHHHHHHSE---EEECCCTTSCHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhcCC---ceeEEEcccCccHHHHHHHHHh
Confidence 3455666677777776654 7888899999999988888665
No 174
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.0004 Score=51.54 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887654
No 175
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=96.34 E-value=0.0012 Score=47.94 Aligned_cols=22 Identities=36% Similarity=0.635 Sum_probs=19.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|.|++|+|||++|..+...
T Consensus 16 gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 16 GVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHc
Confidence 4999999999999999888765
No 176
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.32 E-value=0.0011 Score=48.19 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 7 i~vvG~~~vGKTsLi~~~~~~~ 28 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTRNE 28 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887643
No 177
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=96.31 E-value=0.0017 Score=46.09 Aligned_cols=52 Identities=10% Similarity=0.093 Sum_probs=36.3
Q ss_pred CCCcEEEEEeCCCCCCH---HHHHHHHHHHHhhcCcceEEEEecCCcccchHhhcccc
Q 022641 153 CPPYKIIILDEADSMTE---DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCA 207 (294)
Q Consensus 153 ~~~~~lliiDei~~l~~---~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~ 207 (294)
....++||+||+...-. -..+.+.++++..+...-+|+|++... +.+..+..
T Consensus 92 ~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p---~~L~e~AD 146 (157)
T d1g5ta_ 92 DPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCH---RDILDLAD 146 (157)
T ss_dssp CTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCC---HHHHHHCS
T ss_pred cCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCC---HHHHHhcc
Confidence 34578999999854211 123467778888899999999997654 56666655
No 178
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.31 E-value=0.0011 Score=48.73 Aligned_cols=21 Identities=33% Similarity=0.464 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
++|.|++|||||+|+..+...
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 899999999999999988643
No 179
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.29 E-value=0.00099 Score=48.27 Aligned_cols=22 Identities=27% Similarity=0.483 Sum_probs=20.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|++|+|||+|+..+...-
T Consensus 8 i~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999998754
No 180
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=96.29 E-value=0.0011 Score=51.39 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=21.5
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
...+.|+||+|+||||+++.++...
T Consensus 28 GEi~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 28 GDVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHHcCc
Confidence 3469999999999999999998644
No 181
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.28 E-value=0.0013 Score=49.38 Aligned_cols=24 Identities=29% Similarity=0.376 Sum_probs=21.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
-|+|.|+.|+||||+++.|++.+.
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L~ 27 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETLE 27 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 588999999999999999999873
No 182
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.28 E-value=0.0013 Score=47.77 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+|+..+...-
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~~ 26 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVNDK 26 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHcCC
Confidence 8999999999999999987643
No 183
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.27 E-value=0.0012 Score=47.70 Aligned_cols=22 Identities=23% Similarity=0.484 Sum_probs=19.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|||||+|+..+...-
T Consensus 5 i~viG~~~vGKTsLi~r~~~~~ 26 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKGT 26 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999887543
No 184
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.27 E-value=0.0014 Score=49.19 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=21.6
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
-|+|.|+.|+||||+++.|++.+.
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L~ 28 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEALC 28 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 478889999999999999999874
No 185
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.26 E-value=0.0014 Score=49.04 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=20.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+|.|+.|+||||+++.|.+.+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l 24 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAF 24 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 7889999999999999999987
No 186
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.26 E-value=0.0011 Score=48.05 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=19.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|+|.+|||||+|+..+...-
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~~ 29 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQSY 29 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999987643
No 187
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.25 E-value=0.0014 Score=47.10 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 5 v~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987653
No 188
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.22 E-value=0.0014 Score=47.48 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=18.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
|+|+|++|+|||+|+..|...
T Consensus 3 V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 3 VLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999743
No 189
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.21 E-value=0.0015 Score=47.06 Aligned_cols=23 Identities=22% Similarity=0.468 Sum_probs=20.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++|+|.+|||||+|+..+...-+
T Consensus 7 i~lvG~~~vGKTsli~rl~~~~f 29 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVEDSF 29 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSCC
T ss_pred EEEECCCCcCHHHHHHHHHhCCC
Confidence 89999999999999999876543
No 190
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=96.19 E-value=0.00084 Score=52.81 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=20.0
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.+.|.++|++|+||||+++.+.+.+
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~i~ 28 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQIF 28 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 44679999999999999999998876
No 191
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.18 E-value=0.0012 Score=50.61 Aligned_cols=24 Identities=29% Similarity=0.227 Sum_probs=21.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|.|+||+|||+++..++..+.
T Consensus 36 l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 36 VTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHH
Confidence 489999999999999999998874
No 192
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.16 E-value=0.0013 Score=47.36 Aligned_cols=22 Identities=23% Similarity=0.463 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 5 i~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987643
No 193
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=96.15 E-value=0.0014 Score=49.04 Aligned_cols=19 Identities=37% Similarity=0.384 Sum_probs=17.2
Q ss_pred EEEECCCCCCHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIA 103 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la 103 (294)
+-|+|++|+||||+++.+.
T Consensus 5 IgITG~igSGKStv~~~l~ 23 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT 23 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 5689999999999999885
No 194
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.15 E-value=0.0016 Score=47.03 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+++..+...-
T Consensus 9 i~vvG~~~vGKTsli~~~~~~~ 30 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKDGA 30 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887643
No 195
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=96.14 E-value=0.0014 Score=48.55 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=20.0
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
+.++|+|+||+|||||...|..
T Consensus 24 ~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHhcC
Confidence 4699999999999999999974
No 196
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.13 E-value=0.0016 Score=47.00 Aligned_cols=21 Identities=33% Similarity=0.593 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
+++.|++|+|||+|+..+...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999988654
No 197
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.13 E-value=0.0017 Score=47.60 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|.+|||||+|+..+...-
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~~ 26 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNKK 26 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887643
No 198
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.13 E-value=0.022 Score=42.31 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=27.0
Q ss_pred CCCcEEEEEeCCCCC-CHHHHHHHHHHHHhhcCcceEEEEec
Q 022641 153 CPPYKIIILDEADSM-TEDAQNALRRTMETYSKVTRFFFICN 193 (294)
Q Consensus 153 ~~~~~lliiDei~~l-~~~~~~~L~~~l~~~~~~~~ii~~~~ 193 (294)
..+-..+++||+|.+ +......+.++++..+....+++.|.
T Consensus 143 ~~~l~~lViDEad~l~~~~~~~~i~~I~~~~~~~~Q~i~~SA 184 (208)
T d1hv8a1 143 LKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSA 184 (208)
T ss_dssp TTSCCEEEEETHHHHHTTTTHHHHHHHHHTSCSSCEEEEECS
T ss_pred cccCcEEEEEChHHhhcCCChHHHHHHHHhCCCCCeEEEEEc
Confidence 345569999999975 33344556677776666666666553
No 199
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=96.12 E-value=0.024 Score=39.12 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=23.4
Q ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEe
Q 022641 155 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC 192 (294)
Q Consensus 155 ~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~ 192 (294)
+.++|+|||++.++. ....+...+.. ....|++.+
T Consensus 79 ~~dvI~IDE~QFf~d-~i~~~~~~~~~--~g~~Viv~G 113 (139)
T d2b8ta1 79 ETKVIGIDEVQFFDD-RICEVANILAE--NGFVVIISG 113 (139)
T ss_dssp TCCEEEECSGGGSCT-HHHHHHHHHHH--TTCEEEEEC
T ss_pred CcCEEEechhhhcch-hHHHHHHHHHh--cCceEEEEE
Confidence 457999999999974 45556666654 233455555
No 200
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.11 E-value=0.0035 Score=48.69 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=29.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRG 126 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~ 126 (294)
.+.|+||||+|||+++..++..+..+ +..++.++......
T Consensus 56 itei~G~~gsGKTtl~l~~~~~~q~~---g~~~vyidtE~~~~ 95 (263)
T d1u94a1 56 IVEIYGPESSGKTTLTLQVIAAAQRE---GKTCAFIDAEHALD 95 (263)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEESSCCCC
T ss_pred EEEEecCCCcHHHHHHHHHHHHHHcC---CCEEEEEccccccC
Confidence 48999999999999999999887543 23455555554433
No 201
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.10 E-value=0.0017 Score=46.81 Aligned_cols=22 Identities=18% Similarity=0.407 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999887654
No 202
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.0017 Score=47.19 Aligned_cols=22 Identities=27% Similarity=0.534 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+++..+...-
T Consensus 10 i~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 8999999999999999987644
No 203
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=96.08 E-value=0.0019 Score=48.47 Aligned_cols=22 Identities=41% Similarity=0.496 Sum_probs=18.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+.|+|++|+||||+++.+. .+
T Consensus 5 iIgitG~igSGKStv~~~l~-~~ 26 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA-DL 26 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH-HT
T ss_pred EEEEECCCcCCHHHHHHHHH-HC
Confidence 36799999999999999886 44
No 204
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.0019 Score=46.89 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++++|++|+|||+++..+...-
T Consensus 9 I~vvG~~~vGKSSli~~~~~~~ 30 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNK 30 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999998887643
No 205
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=96.06 E-value=0.0013 Score=47.81 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.6
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|.||+|+|||++|..+...
T Consensus 17 gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 17 GVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHc
Confidence 4999999999999999888754
No 206
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=96.05 E-value=0.0014 Score=47.26 Aligned_cols=22 Identities=36% Similarity=0.604 Sum_probs=19.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|.|++|+|||+++-.+.+.
T Consensus 17 gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 17 GVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHc
Confidence 5999999999999999888765
No 207
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.02 E-value=0.002 Score=49.01 Aligned_cols=22 Identities=32% Similarity=0.431 Sum_probs=18.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.++|+|+||+|||+++..++..
T Consensus 28 ~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 28 STLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHH
Confidence 4999999999999999776654
No 208
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.00 E-value=0.002 Score=46.68 Aligned_cols=21 Identities=33% Similarity=0.458 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
++|.|++|+|||+|+..+...
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999988643
No 209
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=96.00 E-value=0.0015 Score=47.48 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=18.2
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~ 104 (294)
++++|++|+|||+|+..+..
T Consensus 19 I~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEESTTSSHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 99999999999999988754
No 210
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=95.95 E-value=0.0018 Score=46.91 Aligned_cols=22 Identities=27% Similarity=0.366 Sum_probs=19.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
-.++++|++|+|||+++..+..
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 3599999999999999998754
No 211
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.95 E-value=0.0018 Score=49.68 Aligned_cols=25 Identities=16% Similarity=0.147 Sum_probs=22.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.-|+|-|+-|+||||+++.|++.+.
T Consensus 3 k~IviEG~~GsGKST~~~~L~~~l~ 27 (241)
T d2ocpa1 3 RRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred eEEEEECCCCCcHHHHHHHHHHHHh
Confidence 3589999999999999999999884
No 212
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.94 E-value=0.0025 Score=48.03 Aligned_cols=26 Identities=31% Similarity=0.308 Sum_probs=23.2
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
++.-|.|.|+-|+||||+++.|++.+
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L 27 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKL 27 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHH
Confidence 34468999999999999999999988
No 213
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.93 E-value=0.0024 Score=46.06 Aligned_cols=22 Identities=18% Similarity=0.493 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|||||+++..+...-
T Consensus 7 i~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 7999999999999999988754
No 214
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=95.92 E-value=0.0018 Score=47.30 Aligned_cols=20 Identities=35% Similarity=0.566 Sum_probs=18.0
Q ss_pred cEEEECCCCCCHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIA 103 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la 103 (294)
.++++|++|+|||+|+..+.
T Consensus 19 KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 19 RILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEETTSSHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 39999999999999998774
No 215
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=95.89 E-value=0.0017 Score=47.40 Aligned_cols=22 Identities=23% Similarity=0.469 Sum_probs=19.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.|+|+|+||+|||||..+|..+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999999753
No 216
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=95.84 E-value=0.0022 Score=50.12 Aligned_cols=23 Identities=35% Similarity=0.483 Sum_probs=20.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+|+|+||+|||+++..++..+
T Consensus 31 ~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 31 VGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 48899999999999999998875
No 217
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.82 E-value=0.0022 Score=47.43 Aligned_cols=22 Identities=27% Similarity=0.525 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|.|++|+|||+|+..+...-
T Consensus 9 ivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCcCHHHHHHHHhhCC
Confidence 8999999999999999887643
No 218
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.78 E-value=0.00095 Score=51.17 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=21.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
-|+|.|+-|+||||+++.|++.+
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l 26 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLC 26 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGC
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 48999999999999999999887
No 219
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.76 E-value=0.0015 Score=47.33 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=8.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
++|.|.+|||||+|+..+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 899999999999999887754
No 220
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=95.72 E-value=0.0029 Score=48.46 Aligned_cols=23 Identities=30% Similarity=0.322 Sum_probs=20.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|.|+|+.|+||||+|..|+..+
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHhC
Confidence 37899999999999999998875
No 221
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.63 E-value=0.0037 Score=48.91 Aligned_cols=23 Identities=26% Similarity=0.242 Sum_probs=20.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
-++|.|+||+|||+++..++..+
T Consensus 37 l~vi~G~~G~GKT~~~~~la~~~ 59 (277)
T d1cr2a_ 37 VIMVTSGSGMGKSTFVRQQALQW 59 (277)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHhh
Confidence 48999999999999999998764
No 222
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=95.63 E-value=0.017 Score=39.96 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=18.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
-+++||=.+|||+-+-..++.+
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~ 31 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRA 31 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeccccHHHHHHHHHHHHh
Confidence 5789999999999887777665
No 223
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=95.62 E-value=0.065 Score=41.32 Aligned_cols=24 Identities=29% Similarity=0.380 Sum_probs=21.4
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+|+.+.|..|+|||||+.++....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 479999999999999999997654
No 224
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=95.61 E-value=0.0069 Score=47.33 Aligned_cols=36 Identities=33% Similarity=0.447 Sum_probs=28.4
Q ss_pred HHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 72 VLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 72 ~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+..-+.......++++|--|+||||++..+|..+.
T Consensus 10 ~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA 45 (279)
T d1ihua2 10 ALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLA 45 (279)
T ss_dssp HHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 344455566666789999999999999999988874
No 225
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.59 E-value=0.0043 Score=48.58 Aligned_cols=23 Identities=35% Similarity=0.483 Sum_probs=20.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+|+|+.|+||||++.++.-.++
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~l~ 48 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVGLY 48 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 58999999999999999986553
No 226
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=95.54 E-value=0.0027 Score=46.26 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=19.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
++|.|+|.||+|||||+..|..
T Consensus 2 ~~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 2 ADVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp CSEEEECCGGGCHHHHHHHHCS
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 4689999999999999999864
No 227
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.54 E-value=0.0098 Score=46.17 Aligned_cols=41 Identities=24% Similarity=0.278 Sum_probs=28.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcch
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGI 127 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~ 127 (294)
...|+||+|+|||+++..++...... +..++.++.....+.
T Consensus 62 i~e~~G~~~~GKT~l~l~~~~~~q~~---g~~~vyIDtE~~~~~ 102 (269)
T d1mo6a1 62 VIEIYGPESSGKTTVALHAVANAQAA---GGVAAFIDAEHALDP 102 (269)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHT---TCEEEEEESSCCCCH
T ss_pred eEEEecCCCcHHHHHHHHHHHHHhcC---CCEEEEEECCccCCH
Confidence 38999999999999998888776433 334555665554443
No 228
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.51 E-value=0.0036 Score=46.22 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=17.5
Q ss_pred EEEECCCCCCHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAI 102 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~l 102 (294)
++|.|.+|+|||+++..+
T Consensus 5 ivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEECSTTSSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 899999999999999998
No 229
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=95.41 E-value=0.0033 Score=45.94 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=19.0
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
..|.|+|+||+|||+|...|..
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSEE
T ss_pred CeEEEECCCCCCHHHHHHHHhC
Confidence 3589999999999999988753
No 230
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=95.36 E-value=0.00074 Score=51.27 Aligned_cols=23 Identities=35% Similarity=0.559 Sum_probs=18.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+|.|++|+|||||+.+|....
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC--
T ss_pred eEEEECCCCccHHHHHHhhccHh
Confidence 47899999999999999986543
No 231
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.35 E-value=0.0054 Score=44.47 Aligned_cols=22 Identities=14% Similarity=0.151 Sum_probs=19.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.|++|+|||+|+..+...-
T Consensus 8 i~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 8 LGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 8999999999999999887654
No 232
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=95.32 E-value=0.0046 Score=44.75 Aligned_cols=22 Identities=27% Similarity=0.389 Sum_probs=19.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
+|+|.|.||+|||+|..+|...
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999754
No 233
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=95.31 E-value=0.005 Score=44.89 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=19.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.+.|+|.+|+|||+|+.++...
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 3899999999999999998754
No 234
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=95.28 E-value=0.0062 Score=45.31 Aligned_cols=22 Identities=27% Similarity=0.215 Sum_probs=17.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
.++++.-|+|+|||........
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~ 62 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPAL 62 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchhhhhhh
Confidence 3799999999999987654443
No 235
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=95.23 E-value=0.074 Score=47.06 Aligned_cols=60 Identities=20% Similarity=0.325 Sum_probs=41.9
Q ss_pred CCchhhhhcCCCcchhhcccHHHH--HHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVV--RVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~--~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
++..+.+.|......++..+-=.+ .....++..+..+.|++.|.+|+|||..++.+.+.+
T Consensus 88 y~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 88 YTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp CSHHHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 344455666666655555543222 455566666776779999999999999999998876
No 236
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=95.23 E-value=0.011 Score=45.66 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=24.8
Q ss_pred HHHHHHHHcCCC--CcEEEECCCCCCHHHHHHHHHHH
Q 022641 71 RVLTNTLETANC--PHMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 71 ~~l~~~l~~~~~--~~ill~Gp~G~GKT~la~~la~~ 105 (294)
..+..-+..... -+|+|+|.+|+|||++...+..+
T Consensus 19 ~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 19 LELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHhhcCCCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 344444444322 25999999999999999999754
No 237
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=95.21 E-value=0.0024 Score=46.55 Aligned_cols=23 Identities=17% Similarity=0.328 Sum_probs=19.6
Q ss_pred CCcEEEECCCCCCHHHHHHHHHH
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~ 104 (294)
.+.|.|+|.|++|||+|..++..
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 34599999999999999988843
No 238
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.17 E-value=0.0053 Score=46.34 Aligned_cols=23 Identities=22% Similarity=0.329 Sum_probs=19.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++|.|++|+|||++++.+...-
T Consensus 8 KilllG~~~vGKTsll~~~~~~~ 30 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRILH 30 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 39999999999999999986554
No 239
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.15 E-value=0.013 Score=45.54 Aligned_cols=39 Identities=33% Similarity=0.338 Sum_probs=28.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDR 125 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~ 125 (294)
.+.|+||+|+|||+++..++..+..+ +..++.++.....
T Consensus 59 itei~G~~~sGKT~l~l~~~~~aqk~---g~~v~yiDtE~~~ 97 (268)
T d1xp8a1 59 ITEIYGPESGGKTTLALAIVAQAQKA---GGTCAFIDAEHAL 97 (268)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT---TCCEEEEESSCCC
T ss_pred EEEEecCCccchHHHHHHHHHHHHhC---CCEEEEEECCccC
Confidence 48999999999999999999887533 2345555555433
No 240
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.09 E-value=0.0055 Score=45.05 Aligned_cols=23 Identities=22% Similarity=0.202 Sum_probs=20.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
+++.|..|+|||+++..+...-+
T Consensus 5 iv~lG~~~vGKTsll~r~~~~~~ 27 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRIIHG 27 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHHHHHHhCCCC
Confidence 89999999999999999976653
No 241
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.03 E-value=0.0017 Score=46.19 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=20.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|.|.||+|||+|+.+|..+-
T Consensus 3 I~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998764
No 242
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=94.94 E-value=0.027 Score=49.81 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=42.1
Q ss_pred CCchhhhhcCCCcchhhcccHHHH--HHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 47 SSQPWVEKYRPKQVKDVAHQEEVV--RVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~g~~~~~--~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+..+.+.|......++..+-=.+ .....+...+..+.|++.|.+|+|||..++.+.+.+
T Consensus 49 y~~~~~~~y~~~~~~~~~PHif~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 49 YKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CSHHHHHHHSSCCGGGSCCCHHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCCCCCChHHHHHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 344455566655555555443222 455666667777779999999999999999998876
No 243
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=94.85 E-value=0.0086 Score=46.82 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=25.5
Q ss_pred HHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 76 TLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 76 ~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+-.++++..+|.|++|+|||+++..+++..
T Consensus 37 l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 37 ASPIGRGQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp HSCCBTTCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred cccccCCCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 3344566679999999999999999999865
No 244
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=94.84 E-value=0.16 Score=37.34 Aligned_cols=23 Identities=26% Similarity=0.187 Sum_probs=20.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+.+.|-++.|||||+.+|....
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~ 27 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVA 27 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHh
Confidence 58999999999999999997654
No 245
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=94.80 E-value=0.005 Score=49.34 Aligned_cols=22 Identities=32% Similarity=0.418 Sum_probs=20.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
-+|+||.|+|||+++.||+-.+
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6999999999999999998665
No 246
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.65 E-value=0.0058 Score=46.18 Aligned_cols=23 Identities=35% Similarity=0.356 Sum_probs=20.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~ 105 (294)
|..+|+|.-|+||||+++.+.++
T Consensus 4 Pv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 4 AVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHS
T ss_pred CEEEEeeCCCCCHHHHHHHHHhc
Confidence 45899999999999999998875
No 247
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.62 E-value=0.0093 Score=43.53 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=19.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
++|.|..|+|||++++.+...-
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~ 26 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIH 26 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 8999999999999999887654
No 248
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=94.51 E-value=0.01 Score=44.29 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=21.5
Q ss_pred cEEEECC-CCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGP-PGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp-~G~GKT~la~~la~~~~ 107 (294)
.++++|- +|+|||+++..|+..+.
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa 27 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAK 27 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCccHHHHHHHHHHHHH
Confidence 5889999 59999999999999984
No 249
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=94.50 E-value=0.015 Score=45.52 Aligned_cols=26 Identities=38% Similarity=0.529 Sum_probs=22.6
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
++.++++|--|+||||++.++|..+-
T Consensus 8 p~~i~~sGKGGVGKTTvaa~lA~~lA 33 (296)
T d1ihua1 8 PPYLFFTGKGGVGKTSISCATAIRLA 33 (296)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CeEEEEECCCcChHHHHHHHHHHHHH
Confidence 34588999999999999999998873
No 250
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.50 E-value=0.042 Score=41.32 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=20.2
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
..+|.=+.|+|||..+-+++..+.
T Consensus 33 g~iLaDe~GlGKT~~~i~~~~~~~ 56 (230)
T d1z63a1 33 GICLADDMGLGKTLQTIAVFSDAK 56 (230)
T ss_dssp CEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCChHHHHHHhhhhhh
Confidence 477777999999999988887764
No 251
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=94.49 E-value=0.0092 Score=49.78 Aligned_cols=24 Identities=33% Similarity=0.444 Sum_probs=21.1
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+|++++|++|+|||+++..+..++
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~ 74 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTG 74 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHH
Confidence 479999999999999998877765
No 252
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.43 E-value=0.016 Score=46.30 Aligned_cols=23 Identities=35% Similarity=0.378 Sum_probs=20.2
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+|+|+.|+|||++..++.-.+
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 36899999999999999997655
No 253
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=94.40 E-value=0.043 Score=48.69 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=40.2
Q ss_pred chhhhhcCCCcchhhcccHH--HHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 49 QPWVEKYRPKQVKDVAHQEE--VVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 49 ~~~~~~~~~~~~~~~~g~~~--~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.+.|......++..+-= +-.....++..+..+.|++.|.+|+|||..++.+.+.+
T Consensus 56 ~~~~~~y~~~~~~~~~PHif~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 56 EKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp HHHHHHTTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCChHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33445555555555544422 22455666666777779999999999999999998887
No 254
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=94.39 E-value=0.049 Score=42.21 Aligned_cols=25 Identities=24% Similarity=0.073 Sum_probs=22.3
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+|+.|+|..|+|||||+.++....
T Consensus 6 iRni~i~gh~~~GKTtL~e~ll~~~ 30 (276)
T d2bv3a2 6 LRNIGIAAHIDAGKTTTTERILYYT 30 (276)
T ss_dssp EEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCHHHHHHHHHHhc
Confidence 3589999999999999999998765
No 255
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=94.36 E-value=0.0028 Score=46.87 Aligned_cols=23 Identities=35% Similarity=0.463 Sum_probs=20.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+|+||.|+|||+++.+|.-.+.
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 68899999999999999998774
No 256
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=94.31 E-value=0.0095 Score=47.79 Aligned_cols=22 Identities=32% Similarity=0.416 Sum_probs=20.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|-|+-|+||||+++.|++.+
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l 30 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAA 30 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGG
T ss_pred EEEECCccCCHHHHHHHHHHHh
Confidence 8899999999999999999987
No 257
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=94.05 E-value=0.054 Score=48.23 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=39.2
Q ss_pred hhhhhcCCCcchhhcccH--HHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 50 PWVEKYRPKQVKDVAHQE--EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 50 ~~~~~~~~~~~~~~~g~~--~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+...|......++..+- -+-.....++..+..+.|++.|.+|+|||..++.+.+.+
T Consensus 60 ~~~~~y~~~~~~~~~PHif~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 60 DIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp HHHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCCCcHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 344455555444444442 223455566666777779999999999999999998876
No 258
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=93.97 E-value=0.15 Score=38.12 Aligned_cols=24 Identities=29% Similarity=0.238 Sum_probs=21.2
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.+.+.|.+++|||||+.+|....
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHhhc
Confidence 449999999999999999998765
No 259
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=93.85 E-value=0.011 Score=46.80 Aligned_cols=22 Identities=32% Similarity=0.419 Sum_probs=19.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
-.+|+||.|+|||+++.++.-.
T Consensus 26 lnvlvG~NgsGKS~iL~Ai~~~ 47 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNIIDAIKWV 47 (308)
T ss_dssp EEEEECCTTTCSTHHHHHHHHT
T ss_pred eEEEECCCCCcHHHHHHHHHHH
Confidence 3699999999999999999653
No 260
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=93.85 E-value=0.05 Score=48.88 Aligned_cols=55 Identities=20% Similarity=0.283 Sum_probs=37.9
Q ss_pred hhhcCCCcchhhcccHHHH--HHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 52 VEKYRPKQVKDVAHQEEVV--RVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 52 ~~~~~~~~~~~~~g~~~~~--~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+.|+.....++..+-=.+ .....++..+..+.|++.|.+|+|||..++.+.+.+
T Consensus 91 ~~~y~~~~~~~~pPHifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 91 VLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp HHHTTTCCTTSSCSCHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCcHHHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 3445544444444443222 455666667777779999999999999999888876
No 261
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=93.80 E-value=0.052 Score=48.71 Aligned_cols=56 Identities=21% Similarity=0.298 Sum_probs=39.2
Q ss_pred hhhhcCCCcchhhcccH--HHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 51 WVEKYRPKQVKDVAHQE--EVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 51 ~~~~~~~~~~~~~~g~~--~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.|......++..+. -+-.....++..+..+.|++.|.+|+|||..++.+.+.+
T Consensus 88 ~~~~y~~~~~~~~~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 88 VIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp HHHHHTTCCGGGSCCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCcHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44555555555554442 223456666667776779999999999999999988876
No 262
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=93.51 E-value=0.092 Score=37.77 Aligned_cols=20 Identities=30% Similarity=0.400 Sum_probs=18.0
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~ 104 (294)
++++|+.++|||..|..++.
T Consensus 2 iLVtGGarSGKS~~AE~l~~ 21 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIG 21 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EEEECCCCccHHHHHHHHHh
Confidence 68999999999999998863
No 263
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=93.22 E-value=0.014 Score=46.80 Aligned_cols=23 Identities=35% Similarity=0.482 Sum_probs=21.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
|.|-|+-|+||||+++.+++.+.
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~ 30 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFA 30 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHh
Confidence 78999999999999999999873
No 264
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=93.16 E-value=0.015 Score=46.47 Aligned_cols=22 Identities=36% Similarity=0.457 Sum_probs=19.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.|-|+-|+||||+++.+++.+
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l 28 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALG 28 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC--
T ss_pred EEEECCcCCCHHHHHHHHHHHh
Confidence 7889999999999999998776
No 265
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.14 E-value=0.025 Score=43.80 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=24.8
Q ss_pred HHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 77 LETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 77 l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+--++.+.+.|.|++|+|||+++..+++..
T Consensus 63 ~pigkGQr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 63 APYAKGGKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp SCEETTCEEEEEECTTSSHHHHHHHHHHHH
T ss_pred ccccCCCEEEeeCCCCCCHHHHHHHHHHHH
Confidence 334555579999999999999999998875
No 266
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.14 E-value=0.022 Score=46.93 Aligned_cols=22 Identities=36% Similarity=0.537 Sum_probs=19.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
-+|+||.|+|||+++.++.-.+
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~l 49 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVL 49 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5899999999999999997433
No 267
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.13 E-value=0.26 Score=39.24 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=22.1
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+|+.+.|..|.|||||+.++....
T Consensus 17 IRNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 17 VRNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp EEEEEEECCGGGTHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCcHHHHHHHHHHHC
Confidence 3589999999999999999997655
No 268
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=92.98 E-value=0.026 Score=40.75 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=19.3
Q ss_pred cEEEECCCCCCHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~ 104 (294)
++-|+|.|++|||||+.+|..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 589999999999999999974
No 269
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=92.92 E-value=0.35 Score=35.10 Aligned_cols=23 Identities=35% Similarity=0.315 Sum_probs=20.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+.+.|-++.|||||+.+|...+
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~~ 27 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKIL 27 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCcHHHHHHHHHHHH
Confidence 58999999999999999997643
No 270
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.90 E-value=0.04 Score=36.66 Aligned_cols=24 Identities=4% Similarity=0.181 Sum_probs=21.8
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhc
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.++|+|-+|+||+++|.++...+.
T Consensus 8 ~i~~tg~~~~gk~~ia~al~~~l~ 31 (122)
T d1g8fa3 8 SIVLGNSLTVSREQLSIALLSTFL 31 (122)
T ss_dssp EEEECTTCCSCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHH
Confidence 389999999999999999988884
No 271
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.23 E-value=0.065 Score=46.48 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=17.3
Q ss_pred cEEEECCCCCCHHHHHHH-HHHHh
Q 022641 84 HMLFYGPPGTGKTTTALA-IAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~-la~~~ 106 (294)
++++.|.||||||+++-. ++..+
T Consensus 26 ~~lV~A~AGSGKT~~lv~ri~~ll 49 (623)
T g1qhh.1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (623)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEeCchHHHHHHHHHHHHHH
Confidence 588889999999988855 44433
No 272
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=92.20 E-value=0.041 Score=42.42 Aligned_cols=24 Identities=33% Similarity=0.573 Sum_probs=21.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcC
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFG 108 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~ 108 (294)
|.|+|--||||||++..++..+..
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~ 27 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHA 27 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHT
T ss_pred EEEECCCcCCHHHHHHHHHHHHHh
Confidence 668999999999999999999853
No 273
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.15 E-value=0.06 Score=42.87 Aligned_cols=29 Identities=21% Similarity=0.296 Sum_probs=22.3
Q ss_pred HHHHHHHcCCCCcEEEECCCCCCHHHHHH
Q 022641 72 VLTNTLETANCPHMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 72 ~l~~~l~~~~~~~ill~Gp~G~GKT~la~ 100 (294)
.+.+.+..|....++-+|+.|+|||++..
T Consensus 66 ~lv~~~l~G~n~~i~aYGqtgSGKTyT~~ 94 (323)
T d1bg2a_ 66 KIVKDVLEGYNGTIFAYGQTSSGKTHTME 94 (323)
T ss_dssp HHHHHHHTTCCEEEEEECSTTSSHHHHHT
T ss_pred HHHHHHHcCCCcceeeecccCCCCceecc
Confidence 34455556776669999999999999974
No 274
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.08 E-value=0.033 Score=45.85 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=19.8
Q ss_pred CcEEEECCCCCCHHHHHHHHHH
Q 022641 83 PHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~ 104 (294)
-+|.|+|.||+|||+++.+|..
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHT
T ss_pred cEEEEECCCCCCHHHHHHHHhC
Confidence 3699999999999999999964
No 275
>d1jqlb_ c.37.1.20 (B:) delta subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=91.78 E-value=0.95 Score=30.54 Aligned_cols=108 Identities=8% Similarity=0.005 Sum_probs=67.4
Q ss_pred HHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCCcchhHHHHHHHHHHhhhcccCccCCCC
Q 022641 72 VLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGY 151 (294)
Q Consensus 72 ~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
+|...+..+-.+..+|+|+---=+......+.+.+...+......+.. ..... +...+......+
T Consensus 8 ~L~~~l~k~l~~vyll~G~E~~L~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~---~~~l~~~~~t~s---------- 72 (140)
T d1jqlb_ 8 QLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSI--DPNTD---WNAIFSLCQAMS---------- 72 (140)
T ss_dssp GHHHHHHHCCCSEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEECCCC--STTCC---HHHHHHHHHCCC----------
T ss_pred HHHHHHhcCCCcEEEEEcChHHHHHHHHHHHHHHHHhCCcceeeeecc--cccCC---HHHHHHHHcCCC----------
Confidence 345556666556799999988888888888877764333222222222 12222 333344433322
Q ss_pred CCCCcEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEecC
Q 022641 152 PCPPYKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFICNY 194 (294)
Q Consensus 152 ~~~~~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~~~ 194 (294)
..+.+.+|+|++.+... ....+.|.++++..+....+|+.+..
T Consensus 73 lF~~krli~i~~~~~~~~k~~~~~L~~~~~~~~~~~~lii~~~~ 116 (140)
T d1jqlb_ 73 LFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNK 116 (140)
T ss_dssp TTCCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSS
T ss_pred cccCcEEEEEEcCCCCCcHHHHHHHHHHHhCCCCCEEEEEEcCC
Confidence 23456799999887654 56677899999998888888887754
No 276
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=91.49 E-value=0.031 Score=44.04 Aligned_cols=18 Identities=44% Similarity=0.704 Sum_probs=15.5
Q ss_pred cEEEECCCCCCHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALA 101 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~ 101 (294)
..+|.|.+|||||||...
T Consensus 16 valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 16 VAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp EEEEEECTTSCHHHHTCB
T ss_pred EEEEEccCCCCccccccC
Confidence 479999999999998654
No 277
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.44 E-value=0.086 Score=39.71 Aligned_cols=24 Identities=33% Similarity=0.444 Sum_probs=18.7
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++++++|+|+|||..+...+..+
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~ 82 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFL 82 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCChHHHHHHHHHHHH
Confidence 379999999999998766555443
No 278
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=91.26 E-value=0.16 Score=41.67 Aligned_cols=50 Identities=26% Similarity=0.359 Sum_probs=39.8
Q ss_pred cHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCC
Q 022641 66 QEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNAS 122 (294)
Q Consensus 66 ~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~ 122 (294)
|+.+++.|...+..+. ...+|.|-+|+|||.++..+.++. +.+++.+...
T Consensus 16 QP~aI~~l~~~l~~g~-~~q~l~GltGS~ka~~iA~l~~~~------~rp~LVVt~n 65 (413)
T d1t5la1 16 QPQAIAKLVDGLRRGV-KHQTLLGATGTGKTFTISNVIAQV------NKPTLVIAHN 65 (413)
T ss_dssp HHHHHHHHHHHHHHTC-SEEEEEECTTSCHHHHHHHHHHHH------TCCEEEECSS
T ss_pred CHHHHHHHHHHHhcCC-CcEEEeCCCCcHHHHHHHHHHHHh------CCCEEEEeCC
Confidence 5777899999997764 468899999999999999999988 5555555443
No 279
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=91.20 E-value=0.045 Score=42.92 Aligned_cols=17 Identities=47% Similarity=0.751 Sum_probs=14.9
Q ss_pred cEEEECCCCCCHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~ 100 (294)
..+|.|.+|||||||..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 16 VAVFFGLSGTGKTTLST 32 (313)
T ss_dssp EEEEECSTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 37899999999999874
No 280
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=91.17 E-value=0.062 Score=41.90 Aligned_cols=23 Identities=35% Similarity=0.518 Sum_probs=20.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
|.++|--|+||||++..+|..+.
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA 27 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALA 27 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 66799999999999999988873
No 281
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=91.16 E-value=0.072 Score=42.50 Aligned_cols=26 Identities=35% Similarity=0.485 Sum_probs=20.1
Q ss_pred HHHHcCCCCcEEEECCCCCCHHHHHH
Q 022641 75 NTLETANCPHMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 75 ~~l~~~~~~~ill~Gp~G~GKT~la~ 100 (294)
..+..|....++-||..|+|||++..
T Consensus 78 ~~~~~G~n~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 78 DLYENGCVCSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp HHHHHCCEEEEEEECCTTSSHHHHHH
T ss_pred HHHhcCCCeEEEeeeccccccceeee
Confidence 44445665559999999999999964
No 282
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=90.67 E-value=0.094 Score=42.24 Aligned_cols=27 Identities=22% Similarity=0.381 Sum_probs=20.4
Q ss_pred HHHHHHcCCCCcEEEECCCCCCHHHHH
Q 022641 73 LTNTLETANCPHMLFYGPPGTGKTTTA 99 (294)
Q Consensus 73 l~~~l~~~~~~~ill~Gp~G~GKT~la 99 (294)
+...+..|....++-+|++|+|||++.
T Consensus 71 lv~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 71 TVDDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHhhccCceeEEecccCCCCcceee
Confidence 344445666556999999999999986
No 283
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=90.66 E-value=1.3 Score=35.91 Aligned_cols=48 Identities=27% Similarity=0.377 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeec
Q 022641 66 QEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELN 120 (294)
Q Consensus 66 ~~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~ 120 (294)
++.+++.|...+..+. +...|.|.+|+||+.++.++.+.. +.+++.+.
T Consensus 13 qp~aI~~l~~~L~~g~-~~~~L~GlsgS~ka~~~A~l~~~~------~rp~LvVt 60 (408)
T d1c4oa1 13 QPKAIAGLVEALRDGE-RFVTLLGATGTGKTVTMAKVIEAL------GRPALVLA 60 (408)
T ss_dssp HHHHHHHHHHHHHTTC-SEEEEEECTTSCHHHHHHHHHHHH------TCCEEEEE
T ss_pred CHHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHHHHHHh------CCCEEEEe
Confidence 4567889999998654 347999999999999999999988 55555554
No 284
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=90.28 E-value=0.062 Score=42.29 Aligned_cols=18 Identities=44% Similarity=0.708 Sum_probs=15.4
Q ss_pred cEEEECCCCCCHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALA 101 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~ 101 (294)
..+|.|-+|||||||...
T Consensus 16 ~alfFGLSGTGKTTLs~d 33 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLSAD 33 (323)
T ss_dssp EEEEECCTTSSHHHHHCC
T ss_pred EEEEEccCCCCcccceeC
Confidence 378999999999999843
No 285
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.18 E-value=0.08 Score=41.12 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=22.8
Q ss_pred HcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 78 ETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 78 ~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
--++.+.+.|.|++|+|||+++..++...
T Consensus 64 pig~GQr~~If~~~g~GKt~ll~~~~~~~ 92 (285)
T d2jdia3 64 PIGRGQRELIIGDRQTGKTSIAIDTIINQ 92 (285)
T ss_dssp CCBTTCBCEEEESTTSSHHHHHHHHHHHT
T ss_pred CccCCCEEEeecCCCCChHHHHHHHHHhH
Confidence 33455569999999999999998877653
No 286
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=90.17 E-value=0.12 Score=41.49 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=22.6
Q ss_pred HHHHHHHHcCCCCcEEEECCCCCCHHHHH
Q 022641 71 RVLTNTLETANCPHMLFYGPPGTGKTTTA 99 (294)
Q Consensus 71 ~~l~~~l~~~~~~~ill~Gp~G~GKT~la 99 (294)
..+...+..|....++-||+.|+|||++.
T Consensus 76 ~plv~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 76 EEMLQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHhccCceeeeeccCCCCCceee
Confidence 34455556677666999999999999996
No 287
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=90.16 E-value=0.1 Score=41.87 Aligned_cols=29 Identities=28% Similarity=0.340 Sum_probs=21.9
Q ss_pred HHHHHHHHcCCCCcEEEECCCCCCHHHHH
Q 022641 71 RVLTNTLETANCPHMLFYGPPGTGKTTTA 99 (294)
Q Consensus 71 ~~l~~~l~~~~~~~ill~Gp~G~GKT~la 99 (294)
..+...+..|....++-+|+.|+|||++.
T Consensus 70 ~~lv~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 70 CPILDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred HHhHHHHhccCCceEEeeeeccccceEEe
Confidence 34445556666556999999999999886
No 288
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=89.96 E-value=0.87 Score=35.19 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=17.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.+|.=..|.|||..+-++...+
T Consensus 81 g~iLaDemGlGKT~qaia~l~~l 103 (298)
T d1z3ix2 81 GCIMADEMGLGKTLQCITLIWTL 103 (298)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCHHHHHHHHHHHH
Confidence 47888889999998776665554
No 289
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=88.92 E-value=3.2 Score=30.36 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=20.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++++|-...|||||+.+|....
T Consensus 11 ~i~viGHVd~GKSTL~~~Ll~~~ 33 (222)
T d1zunb3 11 RFLTCGNVDDGKSTLIGRLLHDS 33 (222)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHT
T ss_pred eEEEEcCCCCCHHHHHHHHHHHc
Confidence 48999999999999999997664
No 290
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=88.81 E-value=0.81 Score=26.68 Aligned_cols=56 Identities=14% Similarity=0.119 Sum_probs=40.3
Q ss_pred HHHHHHHhCC-CCCHHHHHHHHhhccCcHHHHHH-HHHHHHHHhCCCCChhhhhhhcc
Q 022641 223 VLHICNEEGL-NLDAEALSTLSSISQGDLRRAIT-YLQGAARLFGSSITSKDLISVSG 278 (294)
Q Consensus 223 l~~~~~~~~~-~~~~~~l~~l~~~~~G~~r~~~~-~l~~~~~~~~~~it~~~v~~~~~ 278 (294)
++-++..-|+ .+++++.+.|++-..--++++++ .++|.....+..+|.+||..++.
T Consensus 12 ik~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 12 MKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 4445578888 49999999999987766776664 33344444467799999988763
No 291
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=88.69 E-value=0.16 Score=37.83 Aligned_cols=23 Identities=35% Similarity=0.387 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+..|-.|+||||++..+|..+.
T Consensus 5 av~s~KGGvGKTtia~nlA~~la 27 (232)
T d1hyqa_ 5 TVASGKGGTGKTTITANLGVALA 27 (232)
T ss_dssp EEEESSSCSCHHHHHHHHHHHHH
T ss_pred EEECCCCCChHHHHHHHHHHHHH
Confidence 34558899999999999999884
No 292
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=88.52 E-value=0.11 Score=42.08 Aligned_cols=28 Identities=32% Similarity=0.414 Sum_probs=21.1
Q ss_pred HHHHHHcCCCCcEEEECCCCCCHHHHHH
Q 022641 73 LTNTLETANCPHMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 73 l~~~l~~~~~~~ill~Gp~G~GKT~la~ 100 (294)
+.+.+..|....++-||..|+|||++..
T Consensus 105 lv~~~l~G~n~tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 105 LVQTIFEGGKATCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp HHHHHHTTCEEEEEEEESTTSSHHHHHH
T ss_pred HHHHHHhccCceEEeeccCCCCCceeee
Confidence 4444556665558999999999999964
No 293
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=87.73 E-value=0.15 Score=41.11 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=20.5
Q ss_pred HHHHHHcCCCCcEEEECCCCCCHHHHH
Q 022641 73 LTNTLETANCPHMLFYGPPGTGKTTTA 99 (294)
Q Consensus 73 l~~~l~~~~~~~ill~Gp~G~GKT~la 99 (294)
+...+..|....++-+|++|+|||++.
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 344445666555999999999999996
No 294
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=87.63 E-value=0.16 Score=41.12 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=20.8
Q ss_pred HHHHHHcCCCCcEEEECCCCCCHHHHH
Q 022641 73 LTNTLETANCPHMLFYGPPGTGKTTTA 99 (294)
Q Consensus 73 l~~~l~~~~~~~ill~Gp~G~GKT~la 99 (294)
+...+..|....++-+|+.|+|||++.
T Consensus 116 lv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 116 LIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcccceeEEeeccCCCccceEe
Confidence 444455666556999999999999986
No 295
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=87.62 E-value=0.12 Score=39.88 Aligned_cols=26 Identities=27% Similarity=0.247 Sum_probs=20.4
Q ss_pred CCCCcEEEECCCCCCHHHHHHHHHHH
Q 022641 80 ANCPHMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 80 ~~~~~ill~Gp~G~GKT~la~~la~~ 105 (294)
++.+.+.|.|++|+|||+++..+...
T Consensus 65 g~GQr~~Ifg~~g~GKt~l~~~~~~~ 90 (276)
T d1fx0a3 65 GRGQRELIIGDRQTGKTAVATDTILN 90 (276)
T ss_dssp BTTCBCBEEESSSSSHHHHHHHHHHT
T ss_pred cCCceEeeccCCCCChHHHHHHHHhh
Confidence 34456999999999999999776544
No 296
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=87.54 E-value=0.19 Score=40.16 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=19.5
Q ss_pred HHHHcCCCCcEEEECCCCCCHHHHHH
Q 022641 75 NTLETANCPHMLFYGPPGTGKTTTAL 100 (294)
Q Consensus 75 ~~l~~~~~~~ill~Gp~G~GKT~la~ 100 (294)
..+..|....++-+|..|+|||++..
T Consensus 76 ~~~l~G~n~~i~aYGqtgSGKT~T~~ 101 (342)
T d1f9va_ 76 QSSLDGYNVCIFAYGQTGSGKTFTML 101 (342)
T ss_dssp GGGGGTCCEEEEEECCTTSSHHHHHH
T ss_pred cchhcccccceeeeeccCCccccccc
Confidence 33445654558899999999999874
No 297
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.47 E-value=0.21 Score=37.17 Aligned_cols=23 Identities=35% Similarity=0.410 Sum_probs=19.2
Q ss_pred EEEE-CCCCCCHHHHHHHHHHHhc
Q 022641 85 MLFY-GPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 85 ill~-Gp~G~GKT~la~~la~~~~ 107 (294)
|.++ +-.|+||||++..+|..+.
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la 28 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALG 28 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCcHHHHHHHHHHHHH
Confidence 4455 7789999999999999884
No 298
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.68 E-value=0.34 Score=37.32 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=26.1
Q ss_pred hcccHHHHHHHHHHHHcCCCC--cEEEECCCCCCHHHHHHHHHHH
Q 022641 63 VAHQEEVVRVLTNTLETANCP--HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 63 ~~g~~~~~~~l~~~l~~~~~~--~ill~Gp~G~GKT~la~~la~~ 105 (294)
+.-.++.++.|. .-..+ .|-++||.++|||+|+..+...
T Consensus 15 l~~~~e~l~~l~----~~~~~v~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 15 LMANPEALKILS----AITQPMVVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEECHHHHHHHH----TCCSBEEEEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEECHHHHHHHH----cCCCCEEEEEEECCCCCCHHHHHHHHcCC
Confidence 444555555443 22222 3788999999999999988654
No 299
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=85.35 E-value=0.46 Score=36.82 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=21.6
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|.++++|.-++||||++.+|...-
T Consensus 26 ~P~ivvvG~~SsGKSsliNaLlg~~ 50 (299)
T d2akab1 26 LPQIAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp CCEEEEEEBTTSCHHHHHHHHHTSC
T ss_pred CCeEEEEcCCCCCHHHHHHHHhCCC
Confidence 3559999999999999999998654
No 300
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.96 E-value=1.8 Score=28.23 Aligned_cols=73 Identities=12% Similarity=0.193 Sum_probs=44.7
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHHhC
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEG 231 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~ 231 (294)
++++++|- +..++ ..+.+.. +........+|+.|... .....++..-+..+-.+|.+.+++...+++++++.|
T Consensus 46 ~dlvl~D~~mP~~~--G~el~~~-ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~rrG 121 (121)
T d1ys7a2 46 PDAIVLDINMPVLD--GVSVVTA-LRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG 121 (121)
T ss_dssp CSEEEEESSCSSSC--HHHHHHH-HHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeeccCcc--cHHHHHH-HHhcCCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence 45999995 33333 2333333 33334455566655432 233445555566788899999999999998887654
No 301
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=84.75 E-value=0.4 Score=39.68 Aligned_cols=27 Identities=33% Similarity=0.233 Sum_probs=19.3
Q ss_pred CCCCcEEEECCCCCCHHHHHHH-HHHHh
Q 022641 80 ANCPHMLFYGPPGTGKTTTALA-IAHQL 106 (294)
Q Consensus 80 ~~~~~ill~Gp~G~GKT~la~~-la~~~ 106 (294)
+...++++.+.+|||||+++.. +++.+
T Consensus 14 p~~g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 14 PLQGERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CCSSCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCchHHHHHHHHHHHHHH
Confidence 3334689999999999987654 44444
No 302
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.53 E-value=1.3 Score=32.94 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=20.9
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+.+.|-.+.|||||+..|....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~ 30 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKC 30 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHc
Confidence 69999999999999999998665
No 303
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.25 E-value=1.3 Score=24.86 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHH
Q 022641 218 VMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGA 260 (294)
Q Consensus 218 ~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~ 260 (294)
+....|+.++ ..+++++++.+.+.++|++..+++.|=..
T Consensus 11 e~i~~LkeMF----P~~D~~vI~~VL~a~~G~vd~aid~LL~M 49 (59)
T d1wgla_ 11 EDLKAIQDMF----PNMDQEVIRSVLEAQRGNKDAAINSLLQM 49 (59)
T ss_dssp HHHHHHHHHC----SSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHC----CCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3344454444 78999999999999999999999876543
No 304
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=82.82 E-value=1 Score=34.07 Aligned_cols=41 Identities=24% Similarity=0.400 Sum_probs=31.2
Q ss_pred cEEEEEeCCC-CCCHHHHHHHHHHHHhhcCc-ceEEEEecCCc
Q 022641 156 YKIIILDEAD-SMTEDAQNALRRTMETYSKV-TRFFFICNYIS 196 (294)
Q Consensus 156 ~~lliiDei~-~l~~~~~~~L~~~l~~~~~~-~~ii~~~~~~~ 196 (294)
..+++|||+. +|++..+..|.+++...... ..+|++|.++.
T Consensus 226 ~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~ 268 (292)
T g1f2t.1 226 ISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE 268 (292)
T ss_dssp CSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGG
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHH
Confidence 3499999976 68899899999888876543 36788876644
No 305
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=82.47 E-value=0.42 Score=35.44 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=20.1
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+.+.|-.+.|||||+..|....
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~~ 27 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDR 27 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHc
Confidence 58999999999999999886544
No 306
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=82.35 E-value=0.44 Score=34.67 Aligned_cols=21 Identities=33% Similarity=0.309 Sum_probs=19.0
Q ss_pred cEEEECCCCCCHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~ 104 (294)
|+.+.|....|||||+.+|..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 599999999999999999964
No 307
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=82.31 E-value=0.38 Score=37.48 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=21.1
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|.++++|..++|||+++.+|...-
T Consensus 25 P~ivVvG~~ssGKSSliNaLlG~~ 48 (306)
T d1jwyb_ 25 PQIVVVGSQSSGKSSVLENIVGRD 48 (306)
T ss_dssp CEEEEEECSSSSHHHHHHHHHTSC
T ss_pred CeEEEEeCCCCCHHHHHHHHhCCC
Confidence 569999999999999999998643
No 308
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=82.01 E-value=0.44 Score=34.35 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=18.9
Q ss_pred cEEEECCCCCCHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~ 104 (294)
|+.+.|-+..|||||+.+|..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 479999999999999999964
No 309
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=81.93 E-value=2.5 Score=27.33 Aligned_cols=69 Identities=13% Similarity=0.234 Sum_probs=40.5
Q ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHH
Q 022641 156 YKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHI 226 (294)
Q Consensus 156 ~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~ 226 (294)
++++++| +..-..+..+.+.++-+. .....+|+.|.... ....++..-+..+-.+|.+.+++.+.++++
T Consensus 47 ~dliilD-~~mp~~~G~e~~~~ir~~-~~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~l~~v 117 (118)
T d1u0sy_ 47 PDIVTMD-ITMPEMNGIDAIKEIMKI-DPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 117 (118)
T ss_dssp CSEEEEE-CSCGGGCHHHHHHHHHHH-CTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred CCEEEEe-cCCCCCCHHHHHHHHHHh-CCCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 3599999 322222334444444333 44555666654332 234455555667778999999999988764
No 310
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=81.35 E-value=1.5 Score=33.72 Aligned_cols=43 Identities=23% Similarity=0.365 Sum_probs=34.7
Q ss_pred cEEEEEeCCC-CCCHHHHHHHHHHHHhhcCcceEEEEecCCccc
Q 022641 156 YKIIILDEAD-SMTEDAQNALRRTMETYSKVTRFFFICNYISRI 198 (294)
Q Consensus 156 ~~lliiDei~-~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~ 198 (294)
..+++|||++ +|++..+..|...+.......-+|+||..+..+
T Consensus 242 ~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~~~ 285 (308)
T d1e69a_ 242 SPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVM 285 (308)
T ss_dssp CSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGG
T ss_pred CchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHH
Confidence 3599999998 578999999999998777777888888765433
No 311
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=80.86 E-value=2.1 Score=28.69 Aligned_cols=74 Identities=11% Similarity=0.127 Sum_probs=44.1
Q ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHHh
Q 022641 155 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEE 230 (294)
Q Consensus 155 ~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 230 (294)
.++++++| +..=..+..+.+..+-+ ......+|+.|... .....++..-+..+-.+|.+.+++...+++.+...
T Consensus 44 ~~dlil~D-~~mP~~~G~el~~~lr~-~~~~~pvI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~~~~~ 119 (140)
T d1qkka_ 44 FAGIVISD-IRMPGMDGLALFRKILA-LDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKR 119 (140)
T ss_dssp CCSEEEEE-SCCSSSCHHHHHHHHHH-HCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHh-hccCCCCHHHHHHHHHH-hCCCCcEEEEECCCCHHHHHHHHHcCCCEeecCCCCHHHHHHHHHHHHHHH
Confidence 45699998 32222223444433333 34455566666433 23345555566678889999999999888777543
No 312
>d1f6va_ a.49.1.1 (A:) C-terminal domain of B transposition protein {Bacteriophage mu [TaxId: 10677]}
Probab=80.78 E-value=0.32 Score=29.96 Aligned_cols=71 Identities=17% Similarity=0.094 Sum_probs=52.8
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhc--cCcHHHHHHHHHHHHHHh---CCCCChhhhhhhcccccC
Q 022641 208 KFRFKPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSIS--QGDLRRAITYLQGAARLF---GSSITSKDLISVSGYPTG 282 (294)
Q Consensus 208 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~--~G~~r~~~~~l~~~~~~~---~~~it~~~v~~~~~~~~~ 282 (294)
.+.+..+..+++..++ ...++. +++.+..+..+. +|-+|.+-..|..++.++ +..|+.++|..+......
T Consensus 7 r~~i~k~kk~Di~Aia----~AW~v~-d~~~~k~l~~I~~KpGaLR~l~kTLrLA~M~A~g~g~~v~~~~Ir~A~~~ld~ 81 (91)
T d1f6va_ 7 RTAINKTKKADVKAIA----DAWQIN-GEKELELLQQIAQKPGALRILNHSLRLAAMTAHGKGERVNEDYLRQAFRELDL 81 (91)
T ss_dssp TTCCSSCSGGGTTHHH----HSSTTS-SSHHHHHHHTTSSSCSCHHHHHHHHGGGTCTTCTTSCCSSHHHHHHHHTSSCS
T ss_pred hhhhcCCCHHHHHHHH----HHhCCC-CHHHHHHHHHHccCccHHHHHHHHHHHHHHHhCCCCCcCCHHHHHHHHHHhhh
Confidence 3455667777777766 566665 445566666664 688999999999999888 457999999999887644
Q ss_pred C
Q 022641 283 G 283 (294)
Q Consensus 283 ~ 283 (294)
+
T Consensus 82 d 82 (91)
T d1f6va_ 82 D 82 (91)
T ss_dssp S
T ss_pred h
Confidence 3
No 313
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=80.78 E-value=0.43 Score=35.78 Aligned_cols=15 Identities=27% Similarity=0.521 Sum_probs=14.0
Q ss_pred CcEEEECCCCCCHHH
Q 022641 83 PHMLFYGPPGTGKTT 97 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~ 97 (294)
.++++..|+|+|||.
T Consensus 59 ~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 59 RDIMACAQTGSGKTA 73 (238)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CCEEEECCCCCCcce
Confidence 479999999999998
No 314
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=79.78 E-value=2 Score=23.60 Aligned_cols=31 Identities=6% Similarity=0.119 Sum_probs=26.3
Q ss_pred HhCCCCCHHHHHHHHhhccCcHHHHHHHHHH
Q 022641 229 EEGLNLDAEALSTLSSISQGDLRRAITYLQG 259 (294)
Q Consensus 229 ~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~ 259 (294)
.--..++.++++.+...++|++..+++.|=.
T Consensus 21 ~MFP~~D~~VI~~VL~a~~G~vd~aidaLL~ 51 (54)
T d1mn3a_ 21 NMFPDMDPSLIEDVCIAKKSRIEPCVDALLS 51 (54)
T ss_dssp HHCTTSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3447899999999999999999999986643
No 315
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=79.28 E-value=1.4 Score=26.69 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=42.8
Q ss_pred HHHHHHHHhCCC-CCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhccc
Q 022641 222 RVLHICNEEGLN-LDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSGY 279 (294)
Q Consensus 222 ~l~~~~~~~~~~-~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~~ 279 (294)
.++++++..|+. +++++.+.+.+...--++.++..+...+.++ .+.+|.+||..++..
T Consensus 14 ~i~Riar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr 73 (82)
T d2huec1 14 AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 73 (82)
T ss_dssp HHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 455566777876 8999999988877666777766555555555 567999999988864
No 316
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=78.63 E-value=0.58 Score=36.31 Aligned_cols=21 Identities=33% Similarity=0.350 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
+-|+|-|.+||||+-.++...
T Consensus 13 iGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 13 TGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEECSSSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 899999999999999999865
No 317
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=78.53 E-value=0.55 Score=35.94 Aligned_cols=21 Identities=33% Similarity=0.493 Sum_probs=19.3
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
+.++|-|.+|||+++..+...
T Consensus 115 v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 115 ALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp EEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEecCccchhhhhhhhhcc
Confidence 899999999999999999753
No 318
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.46 E-value=4.6 Score=24.83 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHHh---------CCCCCHHHHHHHHhhccCcH-HHHHHHHHHHHHHhCCCCChhhhhhhcccc
Q 022641 213 PLSEEVMSSRVLHICNEE---------GLNLDAEALSTLSSISQGDL-RRAITYLQGAARLFGSSITSKDLISVSGYP 280 (294)
Q Consensus 213 ~~~~~~~~~~l~~~~~~~---------~~~~~~~~l~~l~~~~~G~~-r~~~~~l~~~~~~~~~~it~~~v~~~~~~~ 280 (294)
||...++...+..+++.- .+.+++..++.|.....+|. ..+..+|.......+..-|.+.+..++...
T Consensus 3 ~p~~~~l~~~f~~ia~~lg~~Wk~Lar~Lgls~~~I~~I~~~~~~~~~e~~~~mL~~W~~~~g~~at~~~L~~aL~~~ 80 (95)
T d1fada_ 3 PPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTC 80 (95)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHH
T ss_pred CccHhhHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHc
Confidence 566666666666555432 35689999999988888887 567788888876555556777777766543
No 319
>d1p2fa2 c.23.1.1 (A:1-120) Response regulator DrrB {Thermotoga maritima [TaxId: 2336]}
Probab=77.47 E-value=3.9 Score=26.42 Aligned_cols=72 Identities=14% Similarity=0.305 Sum_probs=44.3
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHHh
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEE 230 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 230 (294)
++++++|= +..++ ..+.+ +.+........+|+.|... .....++..-+..+-.+|.+.+++...+++.+++.
T Consensus 44 ~dlillD~~mP~~~--G~~~~-~~lr~~~~~~~ii~it~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~r~ 118 (120)
T d1p2fa2 44 FHVVVLDVMLPDYS--GYEIC-RMIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLERE 118 (120)
T ss_dssp CSEEEEESBCSSSB--HHHHH-HHHHHHCTTSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCcccccc--hhHHH-HHHhhcCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHc
Confidence 46999993 34443 23333 3344334555566665433 22334454556678899999999999998887653
No 320
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.31 E-value=0.59 Score=36.61 Aligned_cols=21 Identities=29% Similarity=0.273 Sum_probs=18.2
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
+-|+|-|.+|||||..++...
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 679999999999999999654
No 321
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=77.08 E-value=4.7 Score=23.07 Aligned_cols=62 Identities=11% Similarity=0.066 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHHhC-CCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhccc
Q 022641 214 LSEEVMSSRVLHICNEEG-LNLDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSGY 279 (294)
Q Consensus 214 ~~~~~~~~~l~~~~~~~~-~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~~ 279 (294)
++..-+..+++ .-+ ..++.++...+.+.+.--+..+.......+... .+.|+.+||..++..
T Consensus 4 LP~a~I~ri~k----~~~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 4 LPIAPIGRIIK----NAGAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp SCHHHHHHHHH----HTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred CcHHHHHHHHH----HCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 44445555554 333 348999999999887766666666555555544 567999999988753
No 322
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=75.61 E-value=0.63 Score=35.02 Aligned_cols=23 Identities=26% Similarity=0.353 Sum_probs=20.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
|+.+.|-.+.|||||+..|....
T Consensus 26 Ni~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp EEEEEECGGGTHHHHHHHHHHHT
T ss_pred EEEEEeeCCCCHHHHHHHHHHHc
Confidence 58999999999999999997654
No 323
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=75.00 E-value=1 Score=34.37 Aligned_cols=21 Identities=29% Similarity=0.324 Sum_probs=19.1
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~ 105 (294)
+-|+|-|.+||||+-.++...
T Consensus 5 ~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 5 CGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 679999999999999999865
No 324
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=74.77 E-value=4.5 Score=26.78 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=41.9
Q ss_pred cEEEEEeCCCCCCH-HHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDEADSMTE-DAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDei~~l~~-~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++|- .++. +..+.+. .+........+|+.|... .....++..-+..+-.+|.+.+++...+.+.+..
T Consensus 45 ~dlvilD~--~mp~~~G~e~~~-~lr~~~~~~piI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~~ 118 (137)
T d1ny5a1 45 FNVVLLDL--LLPDVNGLEILK-WIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEH 118 (137)
T ss_dssp CSEEEEES--BCSSSBHHHHHH-HHHHHCTTSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHHH
T ss_pred cccchHHH--hhhhhhHHHHHH-HHHHhCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 45999993 2322 2333333 333334455566555433 2334455555567778899999999888876653
No 325
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=74.18 E-value=8.8 Score=24.85 Aligned_cols=74 Identities=16% Similarity=0.282 Sum_probs=44.7
Q ss_pred CcEEEEEeC-CCCCCHHHHHHHHHHHHh--hcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 155 PYKIIILDE-ADSMTEDAQNALRRTMET--YSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 155 ~~~lliiDe-i~~l~~~~~~~L~~~l~~--~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
+++++++|= ...++ ..+ +++.+.. ......+|+.|.... .....+..-+..+-.+|.+..++...+.+++++
T Consensus 49 ~~dlii~D~~mP~~d--G~e-l~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~l~~~l~r 125 (128)
T d1jbea_ 49 GYGFVISDWNMPNMD--GLE-LLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp CCCEEEEESCCSSSC--HHH-HHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecccccCC--HHH-HHHHHHhCccCCCCcEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 346899984 44443 233 3333322 223455666664433 233444445567888899999999999998877
Q ss_pred hC
Q 022641 230 EG 231 (294)
Q Consensus 230 ~~ 231 (294)
.|
T Consensus 126 ~~ 127 (128)
T d1jbea_ 126 LG 127 (128)
T ss_dssp HT
T ss_pred cC
Confidence 65
No 326
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=72.78 E-value=2 Score=28.03 Aligned_cols=71 Identities=10% Similarity=0.113 Sum_probs=42.0
Q ss_pred cEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++| +. ++ .+..+.+.++-+ ......+|+.|..... ...++..-+..+-.+|.+.+++...+++.+..
T Consensus 48 ~dlii~D-~~-mp~~~G~el~~~l~~-~~~~~piI~~t~~~~~~~~~~a~~~Ga~dyl~KP~~~~eL~~~i~~~l~~ 121 (123)
T d1krwa_ 48 PDVLLSD-IR-MPGMDGLALLKQIKQ-RHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISH 121 (123)
T ss_dssp CSEEEEC-CS-SSSSTTHHHHHHHHH-HSSSCCEEESCCCSCHHHHHHHHHHTEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEeh-hh-cCCchHHHHHHHHHH-hCCCCeEEEEecCCCHHHHHHHHHcCCCeEEeCcCCHHHHHHHHHHHHHc
Confidence 4699999 22 32 223333333333 3455666666654432 23344444456777899999999999887764
No 327
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=72.10 E-value=2.7 Score=32.38 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=30.2
Q ss_pred EEEEEeCCC-CCCHHHHHHHHHHHHhhcCcc-eEEEEecCCc
Q 022641 157 KIIILDEAD-SMTEDAQNALRRTMETYSKVT-RFFFICNYIS 196 (294)
Q Consensus 157 ~lliiDei~-~l~~~~~~~L~~~l~~~~~~~-~ii~~~~~~~ 196 (294)
.+++|||.+ +|++..+..+.+.+....... .+|++|..+.
T Consensus 304 ~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~ 345 (369)
T g1ii8.1 304 SLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEE 345 (369)
T ss_dssp SEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHH
Confidence 499999987 678888888888888754432 5777776643
No 328
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.90 E-value=9 Score=24.54 Aligned_cols=72 Identities=15% Similarity=0.222 Sum_probs=42.3
Q ss_pred cEEEEEe-CCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHHHh
Q 022641 156 YKIIILD-EADSMTEDAQNALRRTMETYSKVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICNEE 230 (294)
Q Consensus 156 ~~lliiD-ei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 230 (294)
++++++| .+..++. .+.+. .+........+|+.|..... ....+..-+..+-.+|.+.+++...+++.+++.
T Consensus 46 ~dlillD~~mp~~~g--~~~~~-~lr~~~~~~piI~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~r~ 120 (122)
T d1kgsa2 46 FDVVILDIMLPVHDG--WEILK-SMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRK 120 (122)
T ss_dssp CSEEEEESCCSSSCH--HHHHH-HHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchh--HHHHH-HHHhcCCCCcEEEEcCCCCHHHHHHHHHcCCceeecCCCCHHHHHHHHHHHHHHh
Confidence 4599999 3333332 23333 33333445556666654332 222333334578889999999999998877653
No 329
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=69.75 E-value=6 Score=24.43 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=21.9
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..++.|.|--|+|-+.||+.+.+.=
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~G 32 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNEG 32 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHT
T ss_pred CCEEEEEEECHHHHHHHHHHHHhCC
Confidence 3469999999999999999998873
No 330
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=68.58 E-value=4.5 Score=25.92 Aligned_cols=69 Identities=22% Similarity=0.255 Sum_probs=39.4
Q ss_pred cEEEEEeCCCCCC-HHHHHHHHHHHHhhcCcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILDEADSMT-EDAQNALRRTMETYSKVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiDei~~l~-~~~~~~L~~~l~~~~~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++|= .++ .+..+.+. .+...+ ...+|+.|..... ...++..-+..+-.+|.+.+++...++..++
T Consensus 45 ~dlillD~--~mp~~~G~~~~~-~i~~~~-~~pvI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~lr 116 (117)
T d2a9pa1 45 PDIIILDL--MLPEIDGLEVAK-TIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLR 116 (117)
T ss_dssp CSEEEECS--SCSSSCHHHHHH-HHHTTC-CCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEecc--ccCCCCccHHHH-HHHhCC-CCCEEEEecCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhC
Confidence 35999993 222 22333333 334333 3455555543332 2233444456788889999999998887664
No 331
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=67.55 E-value=8.6 Score=22.02 Aligned_cols=57 Identities=11% Similarity=0.088 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCC-CCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhcc
Q 022641 222 RVLHICNEEGLN-LDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSG 278 (294)
Q Consensus 222 ~l~~~~~~~~~~-~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~ 278 (294)
++..+++..|+. +++.++..+.+........++.-.+-.+..+ +..|+.++|+-++.
T Consensus 6 ~i~~iL~~~GV~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~ 64 (68)
T d1tafa_ 6 VIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATE 64 (68)
T ss_dssp HHHHHHHHTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred HHHHHHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHH
Confidence 455566788875 6777777777765534444443333333334 55799999987654
No 332
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=67.22 E-value=12 Score=23.84 Aligned_cols=71 Identities=11% Similarity=0.157 Sum_probs=42.4
Q ss_pred CcEEEEEeC-CCCCCHHHHHHHHHHHHh--hcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 155 PYKIIILDE-ADSMTEDAQNALRRTMET--YSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 155 ~~~lliiDe-i~~l~~~~~~~L~~~l~~--~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
.++++++|- +..++. .+ +.+.+.. ......+|+.|.... .....+..-+..+-.+|.+.+++...++..++
T Consensus 44 ~~dlil~D~~mp~~~G--~~-l~~~lr~~~~~~~~pvi~lt~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~v~~~lr 119 (121)
T d1zesa1 44 WPDLILLDWMLPGGSG--IQ-FIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMR 119 (121)
T ss_dssp CCSEEEECSSCTTSCH--HH-HHHHHHHSTTTTTSCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEeecCCCCCCH--HH-HHHHHHhCccCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 356999994 444442 22 3333332 223455666664432 23344444566788899999999999887664
No 333
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=66.11 E-value=7.6 Score=24.85 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=40.6
Q ss_pred EEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHH
Q 022641 157 KIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHIC 227 (294)
Q Consensus 157 ~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~ 227 (294)
+++++|= +..++ ..+.+. .+........+|+.|.... ....++..-+..+-.+|.+.+++...+++++
T Consensus 47 dlillD~~mP~~~--G~el~~-~lr~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~L 117 (119)
T d1peya_ 47 DLVLLDMKIPGMD--GIEILK-RMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL 117 (119)
T ss_dssp SEEEEESCCTTCC--HHHHHH-HHHHHCTTCEEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHS
T ss_pred CEEEEeccCCCCC--HHHHHH-HHHHhCCCCcEEEEecCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC
Confidence 5999983 33333 233333 3334345566777664432 2334444455667789999999999887654
No 334
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=66.08 E-value=9.1 Score=24.61 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=41.8
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHIC 227 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~ 227 (294)
++++++|= ...++ ..+.+. .+........+|+.|.... ....++..-+..+-.+|.+.+++...+++.+
T Consensus 48 ~dlvi~D~~mp~~~--G~e~~~-~lr~~~~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~a~ 119 (123)
T d1dbwa_ 48 NGVLVTDLRMPDMS--GVELLR-NLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (123)
T ss_dssp SEEEEEECCSTTSC--HHHHHH-HHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CcEEEEeccCcccc--chHHHH-HHHhcCCCCeEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 46999984 33333 233333 3344344555666664432 2344555556677789999999999988765
No 335
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.71 E-value=8.6 Score=24.64 Aligned_cols=69 Identities=14% Similarity=0.227 Sum_probs=41.6
Q ss_pred cEEEEEe-CCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILD-EADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiD-ei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++| +...++. .+ +.+.+...+ ...+|+.|.... ....++..-+..+-.+|.+.+++...++..++
T Consensus 47 ~dlii~D~~mp~~~G--~~-~~~~~r~~~-~~pii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~v~~~l~ 118 (121)
T d1xhfa1 47 INLVIMDINLPGKNG--LL-LARELREQA-NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 118 (121)
T ss_dssp CSEEEECSSCSSSCH--HH-HHHHHHHHC-CCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEeecccCCccC--cH-HHHHHHhcC-CCcEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 4599999 3333332 33 333444433 455666554432 22334444556788899999999999887765
No 336
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=62.30 E-value=13 Score=23.86 Aligned_cols=70 Identities=13% Similarity=0.244 Sum_probs=39.6
Q ss_pred EEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEec-CCcc-cchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 157 KIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICN-YISR-IIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 157 ~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~-~~~~-~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
+++++|= ...++ ..+.+..+-+..+....+|++|. .... ....+..-+..+-.+|.+.+++.+.+++++.
T Consensus 49 dlillD~~mP~~d--G~e~~~~ir~~~~~~~~ii~~t~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~v~~ 121 (123)
T d1dz3a_ 49 DILLLDIIMPHLD--GLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYG 121 (123)
T ss_dssp SEEEEESCCSSSC--HHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHH
T ss_pred CEEEEcCCCCCCC--HHHHHHHHHhcCCCCCeEEEEECcCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 5999994 44443 23333333333333344554443 3322 2344444455677889999999998887764
No 337
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.67 E-value=5.4 Score=31.72 Aligned_cols=40 Identities=15% Similarity=0.198 Sum_probs=29.9
Q ss_pred EEEEEeCCCC-CCHHHHHHHHHHHHhhc-CcceEEEEecCCc
Q 022641 157 KIIILDEADS-MTEDAQNALRRTMETYS-KVTRFFFICNYIS 196 (294)
Q Consensus 157 ~lliiDei~~-l~~~~~~~L~~~l~~~~-~~~~ii~~~~~~~ 196 (294)
.+++|||++. |++.....+.+++.... ...-+|++|..+.
T Consensus 356 pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~~ 397 (427)
T d1w1wa_ 356 PFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNT 397 (427)
T ss_dssp SEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCHH
Confidence 3999999985 78887888888886543 4456888886643
No 338
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=60.45 E-value=18 Score=23.21 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=41.7
Q ss_pred CcEEEEEeCC-CCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 155 PYKIIILDEA-DSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 155 ~~~lliiDei-~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
..+++++|-- ..+ +..+.+..+-.. +....+++.|... .....++..-+..+-.+|.+.+++...+++.+.
T Consensus 46 ~~dliilD~~mp~~--~G~~~~~~i~~~-~~~~~ii~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~ 119 (128)
T d1yioa2 46 QHGCLVLDMRMPGM--SGIELQEQLTAI-SDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ 119 (128)
T ss_dssp SCEEEEEESCCSSS--CHHHHHHHHHHT-TCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEeehhhhcccc--hhHHHHHHHHhh-CCCCeEEEEEEECCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4579999952 222 233444443333 4444455444332 223445555556788899999999998887664
No 339
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=58.45 E-value=21 Score=23.32 Aligned_cols=71 Identities=21% Similarity=0.259 Sum_probs=40.5
Q ss_pred cEEEEEe-CCCCCCHHHHHHHHHHHHh--hcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILD-EADSMTEDAQNALRRTMET--YSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiD-ei~~l~~~~~~~L~~~l~~--~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
+++|++| ....++.. ..+ +.+.. ......+|+.|.... .....+..-+..+-.+|++.+++...++..++.
T Consensus 46 ~dlil~D~~~p~~~G~--~~~-~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lr~ 121 (139)
T d1w25a1 46 PDIILLDVMMPGMDGF--TVC-RKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF 121 (139)
T ss_dssp CSEEEEESCCSSSCHH--HHH-HHHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred ceeeeeeccccCCCch--HHH-HHhhhcccccCCCEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 3599998 34444332 222 22322 223445666654332 233445445567888999999999888776643
No 340
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=58.44 E-value=6 Score=28.09 Aligned_cols=34 Identities=32% Similarity=0.396 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 72 VLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 72 ~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
.+.+.+.....+.+.++|- .||||++..+++-+.
T Consensus 4 ~~~~~l~~~~~~~iAITGT--nGKTTt~~~l~~iL~ 37 (207)
T d1j6ua3 4 YFRDTLKREKKEEFAVTGT--DGKTTTTAMVAHVLK 37 (207)
T ss_dssp HHHHHHHHHCCCEEEEECS--SSHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCEEEEECC--CCHHHHHHHHHHHHH
Confidence 3444555556667999995 579999999888773
No 341
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=57.21 E-value=12 Score=23.77 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=41.7
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHHh
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEE 230 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~ 230 (294)
++++++|= +..++ ..+ +.+.+...+.. .+|+.|.... ....++..-+..+-.+|.+.+++...++..++++
T Consensus 45 ~dliilD~~mP~~~--G~e-~~~~ir~~~~~-piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrr~ 118 (119)
T d1zh2a1 45 PDLIILDLGLPDGD--GIE-FIRDLRQWSAV-PVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH 118 (119)
T ss_dssp CSEEEEESEETTEE--HHH-HHHHHHTTCCC-CEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEeccccCCCC--Cch-HHHHHHhccCC-cEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHhhh
Confidence 35999994 33332 222 33344444443 3444443322 2334455556678889999999999998887654
No 342
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=56.45 E-value=4.7 Score=28.76 Aligned_cols=22 Identities=14% Similarity=0.335 Sum_probs=18.7
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.+.++|+|| ||+++.+.|.+..
T Consensus 9 ~Rpivi~Gp---~K~ti~~~L~~~~ 30 (199)
T d1kjwa2 9 ARPIIILGP---TKDRANDDLLSEF 30 (199)
T ss_dssp CCCEEEEST---THHHHHHHHHHHC
T ss_pred CCCEEEECc---CHHHHHHHHHHhC
Confidence 456899998 5999999999986
No 343
>d1k68a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpA [TaxId: 1188]}
Probab=56.11 E-value=23 Score=23.12 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=41.2
Q ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHhhc--CcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 155 PYKIIILD-EADSMTEDAQNALRRTMETYS--KVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 155 ~~~lliiD-ei~~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++|++| ++..++. .+.+ +.+...+ ....+|+.|.... ....++...+..+-.+|.+.+++...++.++.
T Consensus 55 ~pdlillD~~mP~~dG--~el~-~~ir~~~~~~~iPvI~ls~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~i~~ 130 (140)
T d1k68a_ 55 RPDLILLDLNLPKKDG--REVL-AEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp CCSEEEECSSCSSSCH--HHHH-HHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEeeccccccC--hHHH-HHHHhCcccCCCcEEEEeCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 35699998 4444442 2323 2332212 2444666654332 23444445566788899999999988887664
No 344
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=54.62 E-value=9.3 Score=23.99 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=21.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHh
Q 022641 85 MLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~ 106 (294)
+++.||--|-|+++|..+.+++
T Consensus 3 iilegpdccfkstvaaklskel 24 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKEL 24 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHH
T ss_pred EEEeCCchhhHHHHHHHHHhhh
Confidence 6889999999999999999999
No 345
>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}
Probab=54.48 E-value=20 Score=23.77 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=42.3
Q ss_pred CcEEEEEeC-CCCCCHHHHHHHHHHHHhhc--CcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 155 PYKIIILDE-ADSMTEDAQNALRRTMETYS--KVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 155 ~~~lliiDe-i~~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
.++++++|= +..++ ..+ +++.+...+ ....+|+.|.... .....+...+..+-.+|.+.+++...++++++.
T Consensus 62 ~pdlillD~~mP~~~--G~e-l~~~ir~~~~~~~ipiI~lT~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l~~ 138 (149)
T d1k66a_ 62 RPAVILLDLNLPGTD--GRE-VLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp CCSEEEECSCCSSSC--HHH-HHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCeEEccccccCCC--cHH-HHHHHHhccccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 356899883 44444 222 334443322 3445665554332 233344445567778999999999998888764
No 346
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}
Probab=54.29 E-value=32 Score=24.20 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 67 EEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 67 ~~~~~~l~~~l~~~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.++-+.|.+.+......+.++.|.| .|=-.++..+++.+
T Consensus 7 ~~Ag~~LA~~l~~~~~~~~vVl~ip-~ggv~~A~~iA~~L 45 (208)
T d1wd5a_ 7 RHAGALLAEALAPLGLEAPVVLGLP-RGGVVVADEVARRL 45 (208)
T ss_dssp HHHHHHHHHHHGGGCCCSCEEEECT-THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCEEEeCC-CCcHHHHHHHHHHc
Confidence 3344456666655555566677765 34456667788887
No 347
>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.00 E-value=30 Score=23.59 Aligned_cols=72 Identities=8% Similarity=0.109 Sum_probs=43.7
Q ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 154 PPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 154 ~~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
...+++++| ++ ++......+.......+ ...+|+.|... .....++..-+..+-.+|.+.+++...+.....
T Consensus 50 ~~~Dlvl~D-~~-mp~~~~~~~~~~~~~~p-~~pvI~lta~~~~~~~~~al~~Ga~~yL~KP~~~~~L~~~i~~~~~ 123 (189)
T d1qo0d_ 50 VPVDVVFTS-IF-QNRHHDEIAALLAAGTP-RTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARR 123 (189)
T ss_dssp SCCSEEEEE-CC-SSTHHHHHHHHHHHSCT-TCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred CCCCEEEEc-CC-CCCcHHHHHHHHHHcCC-CCCEEEEeccchHHHHHHHHHcCCcEEEEecchhhHHHHHHhhccc
Confidence 346799998 44 44444444445555433 44555555433 234445555556788899999998888876654
No 348
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=51.52 E-value=19 Score=20.80 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=23.1
Q ss_pred CCCCCHHHHHHHHhhccCcHHHHHHHH
Q 022641 231 GLNLDAEALSTLSSISQGDLRRAITYL 257 (294)
Q Consensus 231 ~~~~~~~~l~~l~~~~~G~~r~~~~~l 257 (294)
.+-++.+........++||+..+++.|
T Consensus 38 ~MGF~~~~a~~AL~~~~~n~e~A~~~L 64 (73)
T d1vg5a_ 38 AMGFDRTQVEVALAAADDDLTVAVEIL 64 (73)
T ss_dssp TTTCCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 466898888888888999999999876
No 349
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=51.06 E-value=29 Score=22.74 Aligned_cols=72 Identities=11% Similarity=0.071 Sum_probs=41.6
Q ss_pred CcEEEEEe-CCCCCCHHHHHHHHHHHHhhc--CcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 155 PYKIIILD-EADSMTEDAQNALRRTMETYS--KVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 155 ~~~lliiD-ei~~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
.+++|++| ++..++ ..+ +.+.+...+ ....+|+.|.... ....++...+..+-.+|.+.+++...++.+...
T Consensus 56 ~pdlIllD~~mP~~~--G~e-l~~~ir~~~~~~~iPvi~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~l~~~ 132 (144)
T d1i3ca_ 56 RPNLILLDLNLPKKD--GRE-VLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESF 132 (144)
T ss_dssp CCSEEEECSCCSSSC--HHH-HHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECcccccc--chH-HHHHHHhCcccCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 35699999 344443 233 233333222 3444555554332 233444445567788999999999998877654
No 350
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=50.91 E-value=17 Score=20.34 Aligned_cols=46 Identities=11% Similarity=0.010 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhcc
Q 022641 233 NLDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSG 278 (294)
Q Consensus 233 ~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~ 278 (294)
.++.++...+.+.+.-=+..+.......+... .+.|+.+||..++.
T Consensus 19 ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 19 RVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 47888888888776644555554444444444 56699999988764
No 351
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.61 E-value=2.7 Score=32.93 Aligned_cols=18 Identities=28% Similarity=0.436 Sum_probs=14.3
Q ss_pred cEEEEC--CCCCCHHHHHHH
Q 022641 84 HMLFYG--PPGTGKTTTALA 101 (294)
Q Consensus 84 ~ill~G--p~G~GKT~la~~ 101 (294)
...++| |++||||.+|..
T Consensus 18 ~~yvaaAFPSaCGKTnlAMl 37 (363)
T d1khba1 18 KKYLAAAFPSACGKTNLAMM 37 (363)
T ss_dssp EEEEEEECCTTSCHHHHHTC
T ss_pred EEEEEEecCccccchhHHHh
Confidence 456665 899999999874
No 352
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=48.30 E-value=28 Score=21.82 Aligned_cols=70 Identities=19% Similarity=0.203 Sum_probs=41.4
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++|= ...++ ..+ +++.+..... ..+|+.|.... ....++..-+..+-.+|.+.+++...+++.+++
T Consensus 46 ~dliilD~~mp~~~--g~~-~~~~~~~~~~-~piI~lt~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~lrR 118 (120)
T d1zgza1 46 VDLILLDINLPDEN--GLM-LTRALRERST-VGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWR 118 (120)
T ss_dssp CSEEEEESCCSSSC--HHH-HHHHHHTTCC-CEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCEEeeehhhccch--hHH-HHHHHhccCC-CeEEEEEccCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 35899984 33333 233 3344554443 44555554332 223344445567888999999999988877654
No 353
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.47 E-value=20 Score=23.07 Aligned_cols=71 Identities=15% Similarity=0.275 Sum_probs=42.0
Q ss_pred cEEEEEe-CCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILD-EADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiD-ei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++| .+..++. .+.+..+-+.......+|+.|.... .....+..-+.-+-.+|.+.+++...+++++.
T Consensus 52 ~dlillD~~mP~~dG--~el~~~ir~~~~~~~piI~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~ 125 (128)
T d2r25b1 52 YNMIFMDVQMPKVDG--LLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFCA 125 (128)
T ss_dssp CSEEEECSCCSSSCH--HHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHCT
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHccCCCCeEEEEECCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4699999 4555543 2222222233334455555554332 22334444556788899999999999988764
No 354
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=46.30 E-value=18 Score=24.31 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=41.9
Q ss_pred HHHHHHHhCC-CCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhcccccC
Q 022641 223 VLHICNEEGL-NLDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSGYPTG 282 (294)
Q Consensus 223 l~~~~~~~~~-~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~~~~~ 282 (294)
++++++..+. .++.++...+.+.+.--+..+.......+... .+.|+.+||..++....+
T Consensus 85 IkRi~k~~g~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~~~ 146 (151)
T d1f1ea_ 85 VRRILKRAGIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITYSMP 146 (151)
T ss_dssp HHHHHHHTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSG
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHcCC
Confidence 3333445555 48999999988887766666666555555555 567999999998876554
No 355
>d1w25a2 c.23.1.1 (A:141-293) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=45.89 E-value=37 Score=22.48 Aligned_cols=70 Identities=11% Similarity=0.253 Sum_probs=41.1
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHh--hcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMET--YSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~--~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++|= +..++ ..+ +.+.+.. ......+|+.|.... .....+..-+..+-.+|.+.+++...++..++
T Consensus 56 ~DlillD~~mP~~d--G~e-l~~~ir~~~~~~~iPiI~lt~~~~~~~~~~a~~~Ga~d~l~KP~~~~~L~~~i~~~l~ 130 (153)
T d1w25a2 56 VDLVIVNAAAKNFD--GLR-FTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQ 130 (153)
T ss_dssp CSEEEEETTCSSSC--HHH-HHHHHHTSGGGTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECcccccc--chH-HHHHHHhccccccceeEEeecCCCHHHHHHHHhcCcceEEECCCCHHHHHHHHHHHHH
Confidence 45999994 44443 233 3333322 223455666664433 23344555566788899999999888877664
No 356
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=45.85 E-value=17 Score=23.35 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=42.2
Q ss_pred cEEEEEe-CCCCCCHHHHHHHHHHHHh--hcCcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILD-EADSMTEDAQNALRRTMET--YSKVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiD-ei~~l~~~~~~~L~~~l~~--~~~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++| ++..++. . .+.+.+.. ...+..+|+.|..... ....+..-+..+-.+|.+.+++...+++++.
T Consensus 52 ~dlii~D~~mP~~~G--~-el~~~lr~~~~~~~~pii~lt~~~~~~~~~~a~~~G~~~~l~KP~~~~~L~~~i~~vl~ 126 (129)
T d1p6qa_ 52 HHLVISDFNMPKMDG--L-GLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp CSEEEECSSSCSSCH--H-HHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHHH
T ss_pred CCeEEeeeecCCCCh--H-HHHHHHHhCcccCCCeEEEEEecCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 4699998 5555542 2 23444433 2234556666643321 2233333455788899999999999988774
No 357
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=45.65 E-value=24 Score=22.27 Aligned_cols=66 Identities=11% Similarity=0.177 Sum_probs=35.8
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcccchHhhccccEEEecCCCHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLH 225 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~ 225 (294)
++++++|= +..++ ..+ +++.+.+......+|+.|.............. -+-.+|.+.+++...+++
T Consensus 48 ~dliilD~~lp~~~--G~e-l~~~ir~~~~~~pii~lt~~~~~~~~~~~~~~-dyl~KP~~~~eL~~~i~~ 114 (118)
T d2b4aa1 48 CDLLIVSDQLVDLS--IFS-LLDIVKEQTKQPSVLILTTGRHELIESSEHNL-SYLQKPFAISELRAAIDY 114 (118)
T ss_dssp CSEEEEETTCTTSC--HHH-HHHHHTTSSSCCEEEEEESCC--CCCCSSSCE-EEEESSCCHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCC--HHH-HHHHHHhcCCCCcEEEEECCccHHHHHhhcCC-CEEECCCCHHHHHHHHHH
Confidence 45999995 33332 233 33344444455666666644332222222222 456689999999888864
No 358
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=45.37 E-value=24 Score=22.77 Aligned_cols=70 Identities=13% Similarity=0.105 Sum_probs=40.6
Q ss_pred cEEEEEeC-CCCCC-HHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMT-EDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDe-i~~l~-~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++|= +..++ ......+. ..+....+++.|... ......+..-+..+-.+|.+.+++...+..++++
T Consensus 53 ~dlillD~~mP~~dG~el~~~ir----~~~~~~pii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~r 126 (133)
T d2ayxa1 53 IDIVLSDVNMPNMDGYRLTQRIR----QLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 126 (133)
T ss_dssp CSEEEEEESSCSSCCHHHHHHHH----HHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCCCHHHHHHHHH----HhCCCCCEEEEeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHH
Confidence 45999994 44443 23333333 223344555555432 2233344444557888999999999988877653
No 359
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.21 E-value=18 Score=18.55 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=19.0
Q ss_pred HhCCCCCHHHHHHHHhhccCcHHHHHHHH
Q 022641 229 EEGLNLDAEALSTLSSISQGDLRRAITYL 257 (294)
Q Consensus 229 ~~~~~~~~~~l~~l~~~~~G~~r~~~~~l 257 (294)
..|+ .+++.--.....|+||+..++..|
T Consensus 14 ~MGF-~d~~~Ni~AL~~t~GdV~~Aie~L 41 (44)
T d2bwba1 14 DMGF-FDFDRNVAALRRSGGSVQGALDSL 41 (44)
T ss_dssp HTTC-CCHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCC-CcHHHHHHHHHHcCCCHHHHHHHH
Confidence 3444 255554456677999999999865
No 360
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=43.81 E-value=30 Score=21.76 Aligned_cols=69 Identities=9% Similarity=0.172 Sum_probs=37.9
Q ss_pred EEEEEeC-CCCCCHHHHHHHHHHHHhhc--CcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 157 KIIILDE-ADSMTEDAQNALRRTMETYS--KVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 157 ~lliiDe-i~~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
+++++|- +..++ ..+ +.+.+...+ ....+|+.|..... ....+..-+..+-.+|.+.+++...++++++
T Consensus 47 dlil~D~~mp~~d--G~e-l~~~ir~~~~~~~iPii~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~ 120 (123)
T d1mb3a_ 47 DLILMDIQLPEIS--GLE-VTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLE 120 (123)
T ss_dssp SEEEEESBCSSSB--HHH-HHHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHHS
T ss_pred CEEEEEeccCCCc--HHH-HHHHHHhCCCcCCCCeEEEEEecCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHh
Confidence 5999994 33333 233 333333222 34455655543322 2233334456777889999999999988764
No 361
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=43.49 E-value=30 Score=23.79 Aligned_cols=70 Identities=10% Similarity=0.159 Sum_probs=39.6
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc--ccchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYIS--RIIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~--~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++|= ...+ +..+.+..+-+. + ...||+.|.... ....++..-+.-+-.+|.+.+++...+...+..
T Consensus 49 pDlvllDi~mP~~--dG~e~~~~ir~~-~-~~pIi~lTa~~~~~~~~~al~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 121 (190)
T d1s8na_ 49 PDLVIMDVKMPRR--DGIDAASEIASK-R-IAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSR 121 (190)
T ss_dssp CSEEEEESSCSSS--CHHHHHHHHHHT-T-CSCEEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeccccCc--chHHHHHHHHhc-C-CCCEEEEeCCCCHHHHHHHHHcCCCEeccCCCCHHHHHHHHHHHHHh
Confidence 35999992 2222 234444444333 3 345555554332 223333344456888999999999888776643
No 362
>d1qzma_ c.37.1.20 (A:) ATPase domain of protease Lon (La) {Escherichia coli [TaxId: 562]}
Probab=42.98 E-value=22 Score=21.57 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=41.4
Q ss_pred CCHHHHHHHHHHHH-----HHhCC-----CCCHHHHHHHHhh-c-cCcHHHHHHHHHHHHHHh------C---C--CCCh
Q 022641 214 LSEEVMSSRVLHIC-----NEEGL-----NLDAEALSTLSSI-S-QGDLRRAITYLQGAARLF------G---S--SITS 270 (294)
Q Consensus 214 ~~~~~~~~~l~~~~-----~~~~~-----~~~~~~l~~l~~~-~-~G~~r~~~~~l~~~~~~~------~---~--~it~ 270 (294)
++.+|-..+.++++ +..|+ .++++++..|++. | ...+|.+-..+...++-. + . .||.
T Consensus 3 Yt~~EK~~Iak~yLiPk~l~~~gl~~~~i~i~~~~l~~iI~~YtrEaGVR~Ler~i~~I~Rk~a~~~~~~~~~~~~~i~~ 82 (94)
T d1qzma_ 3 YTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHIEING 82 (94)
T ss_dssp CCHHHHHHHHHHTHHHHHHHHTTCCTTTEEECHHHHHHHHHHHCCCSSSHHHHHHHHHHHHHHHHHHHTCTTCCCEEECT
T ss_pred CCHHHHHHHHHHHhHHHHHHHhccccccccchHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCH
Confidence 45566666665544 44554 4899999998875 3 233666655555433222 1 1 3788
Q ss_pred hhhhhhccccc
Q 022641 271 KDLISVSGYPT 281 (294)
Q Consensus 271 ~~v~~~~~~~~ 281 (294)
+++.+.+|.+.
T Consensus 83 ~~l~~~LG~~~ 93 (94)
T d1qzma_ 83 DNLHDYLGVQR 93 (94)
T ss_dssp TTTHHHHCSCC
T ss_pred HHHHHHcCCCC
Confidence 88888887653
No 363
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.30 E-value=33 Score=20.92 Aligned_cols=67 Identities=16% Similarity=0.164 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHHhC---------CCCCHHHHHHHHhhccCcH-HHHHHHHHHHHHHhCCCCChhhhhhhcccc
Q 022641 214 LSEEVMSSRVLHICNEEG---------LNLDAEALSTLSSISQGDL-RRAITYLQGAARLFGSSITSKDLISVSGYP 280 (294)
Q Consensus 214 ~~~~~~~~~l~~~~~~~~---------~~~~~~~l~~l~~~~~G~~-r~~~~~l~~~~~~~~~~it~~~v~~~~~~~ 280 (294)
|..+++..++..++..-+ +.+++..++.|-....+|+ ..+..+|..+....+..-|.+.+..++...
T Consensus 4 ~~~~dl~~~f~~ia~~lg~~W~~La~~Lgl~~~~I~~I~~~~~~~~~e~~~~mL~~W~~~~g~~at~~~L~~aL~~~ 80 (103)
T d2gf5a1 4 PGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSC 80 (103)
T ss_dssp TTHHHHHHHHHHHHHSCCTTHHHHHHHTTCCHHHHHHHHHHSSSCSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHC
Confidence 455566666655554322 4588999999877777775 567789998887666677888887777543
No 364
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=40.70 E-value=19 Score=25.00 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=19.8
Q ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 80 ANCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 80 ~~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
...+.|.++|- .||||+...+++-+
T Consensus 9 ~~~~vI~VTGT--~GKTTt~~~l~~iL 33 (204)
T d2jfga3 9 AQAPIVAITGS--NGKSTVTTLVGEMA 33 (204)
T ss_dssp CCSCEEEEECS--SSHHHHHHHHHHHH
T ss_pred CCCCEEEEECC--CCHHHHHHHHHHHH
Confidence 44466888886 57999999988877
No 365
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.69 E-value=23 Score=18.72 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=21.3
Q ss_pred HHhCCCCCHHHHHHHHhhccCcHHHHHHHHHH
Q 022641 228 NEEGLNLDAEALSTLSSISQGDLRRAITYLQG 259 (294)
Q Consensus 228 ~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~ 259 (294)
...|.. +.+.--.....|+||+..++..|..
T Consensus 16 ~~MGF~-d~~~Ni~AL~~t~GdV~~Aie~Ll~ 46 (50)
T d2dnaa1 16 QAMGFV-NYNANLQALIATDGDTNAAIYKLKS 46 (50)
T ss_dssp HHHTCC-CHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHcCCC-CHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 344553 5555555667799999999987753
No 366
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=40.61 E-value=29 Score=19.74 Aligned_cols=34 Identities=6% Similarity=-0.045 Sum_probs=28.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCC
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDD 124 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~ 124 (294)
+.+++-+||+--.-|+.+.... +..+..++....
T Consensus 3 i~iYs~~~C~~C~~ak~~L~~~------~i~y~~~~i~~~ 36 (76)
T d1h75a_ 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRV 36 (76)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTC
T ss_pred EEEEeCCCCccHHHHHHHHHhc------CceeEEEeecCC
Confidence 7899999999999999999988 777777776553
No 367
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=40.54 E-value=13 Score=22.52 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=19.5
Q ss_pred cEEEECCCCCCHHHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQ 105 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~ 105 (294)
.+.|+|=.|+|-+.||+.+.+.
T Consensus 3 ~ihfiGIgG~GMs~LA~~L~~~ 24 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAVALHEFSN 24 (89)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT
T ss_pred EEEEEeECHHHHHHHHHHHHhC
Confidence 3789999999999999998775
No 368
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=39.92 E-value=43 Score=21.53 Aligned_cols=83 Identities=14% Similarity=0.206 Sum_probs=48.2
Q ss_pred EEEEEe-CCCCCCHHHHHHHHHHHHhhcCcceEEEEecCC--cccchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCC
Q 022641 157 KIIILD-EADSMTEDAQNALRRTMETYSKVTRFFFICNYI--SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLN 233 (294)
Q Consensus 157 ~lliiD-ei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~--~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 233 (294)
+++++| ....++ ..+.+.++ ........+++.|... .....++..-+.-+-.+|.+.+++.+.+++++.. +..
T Consensus 50 DlvllD~~mP~~~--G~el~~~i-r~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~v~~g-~~~ 125 (138)
T d1a04a2 50 DLILLDLNMPGMN--GLETLDKL-REKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG-EMV 125 (138)
T ss_dssp SEEEEETTSTTSC--HHHHHHHH-HHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHS-CCC
T ss_pred CEEEEecCCCCCC--HHHHHHHH-HhhCCCCCEEEEEEECCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHCC-CCc
Confidence 599998 444443 34434433 3334444455444322 3334455555667888999999999999988753 333
Q ss_pred CCHHHHHHHH
Q 022641 234 LDAEALSTLS 243 (294)
Q Consensus 234 ~~~~~l~~l~ 243 (294)
+++..-..++
T Consensus 126 ~~~~~~~~la 135 (138)
T d1a04a2 126 LSEALTPVLA 135 (138)
T ss_dssp CCTTTHHHHH
T ss_pred CCHHHHHHHH
Confidence 4554444433
No 369
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.15 E-value=22 Score=17.93 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=20.7
Q ss_pred HhCCCCCHHHHHHHHhhccCcHHHHHHHHHH
Q 022641 229 EEGLNLDAEALSTLSSISQGDLRRAITYLQG 259 (294)
Q Consensus 229 ~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~ 259 (294)
..|.. +++.--.....++||+..++..|..
T Consensus 11 ~MGF~-d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 11 SMGFL-NREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp HHTCC-CHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HcCCC-CHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 44543 5555555667799999999987753
No 370
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=36.88 E-value=33 Score=19.74 Aligned_cols=35 Identities=14% Similarity=0.073 Sum_probs=29.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDD 124 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~ 124 (294)
+|.+++-++|+=..-|+.+.+.. +.++..++....
T Consensus 2 ~I~iys~~~Cp~C~~ak~~L~~~------~i~y~~~di~~~ 36 (82)
T d1fova_ 2 NVEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGN 36 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTC
T ss_pred cEEEEeCCCCHhHHHHHHHHHHc------CCCeEEEeccch
Confidence 58899999999999999999988 777777776553
No 371
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=36.68 E-value=21 Score=26.41 Aligned_cols=51 Identities=10% Similarity=0.233 Sum_probs=30.9
Q ss_pred CcEEEEEeCCC-CCCHHHHHHHHHHHHhhcC-cceEEEEecCCcccchHhhccc
Q 022641 155 PYKIIILDEAD-SMTEDAQNALRRTMETYSK-VTRFFFICNYISRIIEPLASRC 206 (294)
Q Consensus 155 ~~~lliiDei~-~l~~~~~~~L~~~l~~~~~-~~~ii~~~~~~~~~~~~l~~r~ 206 (294)
++.+|++||-- .+++.....+++++.+... ...++++|.+... ...+.+|+
T Consensus 167 ~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~-~~~~adri 219 (258)
T d1b0ua_ 167 EPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGF-ARHVSSHV 219 (258)
T ss_dssp CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHH-HHHHCSEE
T ss_pred CCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHH-HHHhCCEE
Confidence 45699999964 5777777666666654332 3457777755432 23444554
No 372
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=36.33 E-value=38 Score=24.42 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=21.5
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
...+.|.||+|||||||++.++...
T Consensus 31 Ge~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 31 GEFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCEEEEECCCCCCcchhhHhccCCC
Confidence 3469999999999999999887654
No 373
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=34.91 E-value=39 Score=24.36 Aligned_cols=25 Identities=32% Similarity=0.339 Sum_probs=22.1
Q ss_pred CCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 82 CPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 82 ~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
...+.|.||+|+||||+++.++...
T Consensus 26 Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 26 GEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp TCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CCEEEEECCCCCcHHHHHHHHhcCc
Confidence 3459999999999999999999865
No 374
>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.78 E-value=38 Score=19.42 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHH
Q 022641 223 VLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQ 258 (294)
Q Consensus 223 l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~ 258 (294)
|..+-.--|+. |.+.++...+.++||+..++.+|-
T Consensus 28 LNQLrEITGIq-D~q~L~~ALkas~Gdl~~AV~~LT 62 (80)
T d1vdla_ 28 LNQLREITGIN-DAQILQQALKDSNGNLELAVAFLT 62 (80)
T ss_dssp HHHHHHHSCCC-CHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHhCCC-cHHHHHHHHHhcCCCHHHHHHHHh
Confidence 33333334554 888999999999999998887664
No 375
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=34.22 E-value=27 Score=17.61 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=23.5
Q ss_pred CCCCCHHHHHHHHhhccCcHHHHHHHH
Q 022641 231 GLNLDAEALSTLSSISQGDLRRAITYL 257 (294)
Q Consensus 231 ~~~~~~~~l~~l~~~~~G~~r~~~~~l 257 (294)
++.++++......+.+++|...+.|.|
T Consensus 13 ~MGF~e~~A~~AL~k~~wnleaAtN~L 39 (43)
T d2g3qa1 13 GMGFTEEEAHNALEKCNWDLEAATNFL 39 (43)
T ss_dssp TTTSCHHHHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 678899888888888999999999876
No 376
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=33.54 E-value=24 Score=24.71 Aligned_cols=21 Identities=33% Similarity=0.352 Sum_probs=17.4
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|.++|- .||||+...+++-+
T Consensus 14 ~I~ITGT--nGKTTt~~~l~~iL 34 (215)
T d1p3da3 14 GIAVAGT--HGKTTTTAMISMIY 34 (215)
T ss_dssp EEEEESS--SCHHHHHHHHHHHH
T ss_pred EEEEECC--CCHHHHHHHHHHHH
Confidence 5889995 57999999888776
No 377
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}
Probab=33.40 E-value=42 Score=22.27 Aligned_cols=30 Identities=10% Similarity=0.250 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhcCcceEEEEecCCcccchH
Q 022641 172 QNALRRTMETYSKVTRFFFICNYISRIIEP 201 (294)
Q Consensus 172 ~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~ 201 (294)
...+.+.+.+...+..++++||+...+...
T Consensus 110 v~~i~~~i~~~~p~aiviivsNPvd~lt~~ 139 (154)
T d1pzga1 110 IREIGQNIKKYCPKTFIIVVTNPLDCMVKV 139 (154)
T ss_dssp HHHHHHHHHHHCTTCEEEECCSSHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEeCCcHHHHHHH
Confidence 334455555667788888888886544333
No 378
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.37 E-value=27 Score=19.31 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=19.5
Q ss_pred HhCCCCCHHHHHHHHhhccCcHHHHHHHH
Q 022641 229 EEGLNLDAEALSTLSSISQGDLRRAITYL 257 (294)
Q Consensus 229 ~~~~~~~~~~l~~l~~~~~G~~r~~~~~l 257 (294)
..|+. +.+.--.....++||+..++..|
T Consensus 31 eMGF~-d~~~Nl~AL~~t~Gdv~~Aie~L 58 (61)
T d1veja1 31 ALGFA-NRDANLQALVATDGDIHAAIEML 58 (61)
T ss_dssp HHTCC-CHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HcCCC-CHHHHHHHHHHcCCCHHHHHHHH
Confidence 44553 55554555677999999999865
No 379
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=33.17 E-value=18 Score=22.74 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=31.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCC-CCcchhHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNAS-DDRGINVVRTKIKT 136 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 136 (294)
+.|||-|.|+|+-=|..+.++. +..+..++-. +..+...+...+..
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~------~i~~~~idy~k~pls~~eL~~ll~~ 48 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEH------KVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCCeEEEEccccCCCHHHHHHHHHh
Confidence 6899999999999999999886 5555554432 22345555555443
No 380
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=32.38 E-value=39 Score=18.88 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=29.3
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCCCC
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDD 124 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~~~ 124 (294)
.+.+++-+||+--.-|+.+.++. +..+..++....
T Consensus 2 ~v~iYt~~~C~~C~~ak~~L~~~------~i~~~~~~i~~~ 36 (74)
T d1r7ha_ 2 SITLYTKPACVQCTATKKALDRA------GLAYNTVDISLD 36 (74)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTC
T ss_pred EEEEEeCCCChhHHHHHHHHHHc------CCceEEEEccCC
Confidence 37899999999999999999998 777777776553
No 381
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=31.11 E-value=26 Score=25.55 Aligned_cols=42 Identities=12% Similarity=0.275 Sum_probs=28.6
Q ss_pred CcEEEEEeCC-CCCCHHHHHHHHHHHHhhcC--cceEEEEecCCc
Q 022641 155 PYKIIILDEA-DSMTEDAQNALRRTMETYSK--VTRFFFICNYIS 196 (294)
Q Consensus 155 ~~~lliiDei-~~l~~~~~~~L~~~l~~~~~--~~~ii~~~~~~~ 196 (294)
++.+|++||- ..+++.....+.+.+.+... ...+|++|.+..
T Consensus 158 ~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHdl~ 202 (240)
T d3dhwc1 158 NPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMD 202 (240)
T ss_dssp CCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEBSCHH
T ss_pred CCCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEcCCHH
Confidence 3469999995 46777777777777765432 456777776543
No 382
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=30.59 E-value=39 Score=25.29 Aligned_cols=40 Identities=18% Similarity=0.251 Sum_probs=31.4
Q ss_pred EEEEEeCCC-CCCHHHHHHHHHHHHhhcCcceEEEEecCCc
Q 022641 157 KIIILDEAD-SMTEDAQNALRRTMETYSKVTRFFFICNYIS 196 (294)
Q Consensus 157 ~lliiDei~-~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~ 196 (294)
.++++||++ ++++..+..|...+.......-+|++|..+.
T Consensus 248 ~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iitTh~~~ 288 (329)
T g1xew.1 248 PFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRDV 288 (329)
T ss_dssp SEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEECCCHH
T ss_pred chhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEEeCCHH
Confidence 489999987 4677777788888887777778888886544
No 383
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=30.56 E-value=62 Score=20.96 Aligned_cols=48 Identities=10% Similarity=0.161 Sum_probs=34.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHhcCCCccCCcceeecCC-CCcchhHHHHHHHHH
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNAS-DDRGINVVRTKIKTF 137 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 137 (294)
||-|||-|+|.|+-=|..+.+.. +..+..++-- +..+...+...+..+
T Consensus 1 ni~iY~~p~Cs~srkal~~L~~~------~i~~~~idy~k~pls~~eL~~ll~~l 49 (138)
T d1j9ba_ 1 NITIYHNPACGTSRNTLEMIRNS------GTEPTIILYLENPPSRDELVKLIADM 49 (138)
T ss_dssp CCEEECCTTCHHHHHHHHHHHHT------TCCCEEECTTTSCCCHHHHHHHHHHH
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCCeEEEeeccCCCCHHHHHHHHHHc
Confidence 47899999999999999998887 6666666533 335666666665544
No 384
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=30.50 E-value=17 Score=24.42 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=13.3
Q ss_pred CCcEEEECCCCC-CHHHH
Q 022641 82 CPHMLFYGPPGT-GKTTT 98 (294)
Q Consensus 82 ~~~ill~Gp~G~-GKT~l 98 (294)
+.++.+.|.+|+ |+++|
T Consensus 2 pK~I~IlGsTGSIG~~tL 19 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTL 19 (150)
T ss_dssp CEEEEEETTTSHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHH
Confidence 346999999997 66665
No 385
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.96 E-value=5.9 Score=30.01 Aligned_cols=20 Identities=30% Similarity=0.157 Sum_probs=13.7
Q ss_pred EEEECCCCCCHHHHHHHHHH
Q 022641 85 MLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 85 ill~Gp~G~GKT~la~~la~ 104 (294)
-+.-=..|=|||.++...+-
T Consensus 113 ~iaem~TGEGKTL~a~l~a~ 132 (288)
T d1nkta3 113 NVAEMKTGEGKTLTCVLPAY 132 (288)
T ss_dssp EEEECCTTSCHHHHTHHHHH
T ss_pred hhhcccCCCchhHHHHHHHH
Confidence 34555789999977765443
No 386
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=28.95 E-value=35 Score=24.85 Aligned_cols=24 Identities=46% Similarity=0.598 Sum_probs=21.5
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHh
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..+.|.||+|+||||+++.++...
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 469999999999999999998765
No 387
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=28.72 E-value=62 Score=20.06 Aligned_cols=71 Identities=17% Similarity=0.194 Sum_probs=43.1
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEecCCcc--cchHhhccccEEEecCCCHHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFICNYISR--IIEPLASRCAKFRFKPLSEEVMSSRVLHICNE 229 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~~--~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~ 229 (294)
++++++|= +..++ ..+.+.. +...+....+|+.|..... ....+..-+..+-.+|.+.+++...++..+++
T Consensus 45 ~dliilD~~mP~~~--G~e~~~~-i~~~~~~~pvi~lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~v~~~lrR 118 (119)
T d2pl1a1 45 PDIAIVDLGLPDED--GLSLIRR-WRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRR 118 (119)
T ss_dssp CSEEEECSCCSSSC--HHHHHHH-HHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred cceeehhccCCCch--hHHHHHH-HHhcCcccceEeeeccCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 45999994 44443 2333443 3333445556666644332 33444445567788999999999999887754
No 388
>d1vega_ a.5.2.1 (A:) NEDD8 ultimate buster-1 (Nub1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.30 E-value=51 Score=18.97 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=32.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHH
Q 022641 213 PLSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAA 261 (294)
Q Consensus 213 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~ 261 (294)
+++.+.+-.++- +.++.++.+...+.++||+..+-+.|....
T Consensus 27 ~~sQesidqLvY-------MGF~~~~Ae~ALRvfrGnVQlAaQtLahng 68 (83)
T d1vega_ 27 SPSQESINQLVY-------MGFDTVVAEAALRVFGGNVQLAAQTLAHHG 68 (83)
T ss_dssp CCCHHHHHHHHH-------HSCCHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHH-------hcccHHHHHHHHHHhcccHHHHHHHHHHcC
Confidence 566666666552 457899999999999999999888776543
No 389
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.82 E-value=30 Score=18.17 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHHHHhCCC-CCHHHHHHHHhhccCcHHH
Q 022641 215 SEEVMSSRVLHICNEEGLN-LDAEALSTLSSISQGDLRR 252 (294)
Q Consensus 215 ~~~~~~~~l~~~~~~~~~~-~~~~~l~~l~~~~~G~~r~ 252 (294)
....+...+..+.+++|+. +++++...+...+..-++.
T Consensus 4 ~~~~Lq~ri~~I~~k~Gl~e~~~dV~~lISHA~QeRLk~ 42 (50)
T d1h3oa_ 4 LQAPLQRRILEIGKKHGITELHPDVVSYVSHATQQRLQN 42 (50)
T ss_dssp CHHHHHHHHHHHHHTTTCCEECTTHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHHHHH
Confidence 4455667788888899986 7788888888777644443
No 390
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.56 E-value=30 Score=25.28 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=26.9
Q ss_pred CcEEEEEeCCC-CCCHHHHHHHHHHHHhhc--CcceEEEEecCCc
Q 022641 155 PYKIIILDEAD-SMTEDAQNALRRTMETYS--KVTRFFFICNYIS 196 (294)
Q Consensus 155 ~~~lliiDei~-~l~~~~~~~L~~~l~~~~--~~~~ii~~~~~~~ 196 (294)
++.+|++||.- .+++.....+.+.+.+.. ....+|++|.+..
T Consensus 158 ~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~ 202 (242)
T d1oxxk2 158 DPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPA 202 (242)
T ss_dssp CCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHH
T ss_pred cccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHH
Confidence 45699999964 566666666666665432 2556777776643
No 391
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.39 E-value=74 Score=20.18 Aligned_cols=73 Identities=7% Similarity=0.074 Sum_probs=40.1
Q ss_pred cEEEEEeC-CCCCC-HHHHHHHHHHHHh-hcCcceEEEEecCC-c-ccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMT-EDAQNALRRTMET-YSKVTRFFFICNYI-S-RIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiDe-i~~l~-~~~~~~L~~~l~~-~~~~~~ii~~~~~~-~-~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++|= ...++ .+....+.+.... ......+|+.|... . .....+..-+..+-.+|.+.+++...+.++++
T Consensus 51 ~dlillD~~mP~~dG~el~~~ir~~~~~~~~~~~~ii~lT~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~l~ 128 (134)
T d1dcfa_ 51 HKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLE 128 (134)
T ss_dssp CSEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHS
T ss_pred CCeEEEEeccCCCchHHHHHHHHHhcccccCCCCeEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHhh
Confidence 46999983 32332 2333344433222 12234455444332 2 22233334455788899999999999988874
No 392
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=26.07 E-value=34 Score=25.52 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=16.7
Q ss_pred cEEEECCCCCCHHHHHHHHHHHh
Q 022641 84 HMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 84 ~ill~Gp~G~GKT~la~~la~~~ 106 (294)
.|-++|-- ||||++..+..-+
T Consensus 45 vI~VTGTN--GKTSt~~~i~~IL 65 (296)
T d1o5za2 45 TIHIGGTN--GKGSVANMVSNIL 65 (296)
T ss_dssp EEEEECSS--SHHHHHHHHHHHH
T ss_pred EEEEEecC--cHHHHHHHHHHHH
Confidence 37777754 6999999998877
No 393
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=25.63 E-value=43 Score=24.94 Aligned_cols=23 Identities=39% Similarity=0.365 Sum_probs=18.1
Q ss_pred CcEEEECCCCCCHHHHHHHHHHHhc
Q 022641 83 PHMLFYGPPGTGKTTTALAIAHQLF 107 (294)
Q Consensus 83 ~~ill~Gp~G~GKT~la~~la~~~~ 107 (294)
+.|-++|-. ||||++..+..-+.
T Consensus 40 kvI~VTGTN--GKtST~~~i~~IL~ 62 (296)
T d2gc6a2 40 RYIHVTGTN--GKGSAANAIAHVLE 62 (296)
T ss_dssp CEEEEECSS--SHHHHHHHHHHHHH
T ss_pred CEEEEeccC--cHHHHHHHHHHHHH
Confidence 348888854 69999999988773
No 394
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.86 E-value=5.5 Score=18.40 Aligned_cols=7 Identities=29% Similarity=0.254 Sum_probs=4.5
Q ss_pred CCCCCHH
Q 022641 90 PPGTGKT 96 (294)
Q Consensus 90 p~G~GKT 96 (294)
-+||||+
T Consensus 7 ~~gC~K~ 13 (28)
T d1ubdc4 7 FDGCNKK 13 (28)
T ss_dssp STTCCCC
T ss_pred CCCcCCc
Confidence 3677775
No 395
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=24.22 E-value=34 Score=26.97 Aligned_cols=71 Identities=8% Similarity=-0.012 Sum_probs=40.7
Q ss_pred CcEEEEEeCCCCCCH-HHHHHHHHHHHhhcCcceEEEEecCCccc--------chHhhcccc-EEEec-CCCHHHHHHHH
Q 022641 155 PYKIIILDEADSMTE-DAQNALRRTMETYSKVTRFFFICNYISRI--------IEPLASRCA-KFRFK-PLSEEVMSSRV 223 (294)
Q Consensus 155 ~~~lliiDei~~l~~-~~~~~L~~~l~~~~~~~~ii~~~~~~~~~--------~~~l~~r~~-~i~~~-~~~~~~~~~~l 223 (294)
.+-++++||++.+.. .....++.. .+...+.+++++.....+ ...+..-|. .+.|. ..+..+..+++
T Consensus 276 ~~v~l~lDE~~~~~~~~~l~~~l~~--~Rk~Gv~~~l~~Qs~~ql~~~yg~~~a~~i~~n~~t~i~~~~~~~d~~tae~~ 353 (433)
T d1e9ra_ 276 RRLWLFIDELASLEKLASLADALTK--GRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDM 353 (433)
T ss_dssp CCEEEEESCGGGSCBCSSHHHHHHH--CTTTTEEEEEEESCHHHHHHHHCHHHHHHHHTTCCEEEEEECCTTCHHHHHHH
T ss_pred CceEEEechHhhhcccHHHHHHHHH--hCCCCceEEEEeccHHHHHHHHhHHHHHHHHHhcCcEEEecCCCCCHHHHHHH
Confidence 455889999988753 333333322 234567778877665443 234667776 45553 34445556666
Q ss_pred HHHH
Q 022641 224 LHIC 227 (294)
Q Consensus 224 ~~~~ 227 (294)
...+
T Consensus 354 s~~~ 357 (433)
T d1e9ra_ 354 SLSL 357 (433)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6555
No 396
>d1jmxa1 a.3.1.7 (A:2-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Probab=23.47 E-value=62 Score=18.99 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=26.6
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhh
Q 022641 212 KPLSEEVMSSRVLHICNEEGLNLDAEALSTLSSI 245 (294)
Q Consensus 212 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~ 245 (294)
+..+.+.....+.++....|..++++....|+++
T Consensus 29 ~r~t~~~W~~~V~~M~~~~Ga~l~~~e~~~Iv~Y 62 (84)
T d1jmxa1 29 QRKTPEGWLMSIARMQVMHGLQISDDDRRTLVKY 62 (84)
T ss_dssp CEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 3467889999999998888988998776666554
No 397
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.36 E-value=90 Score=20.10 Aligned_cols=65 Identities=5% Similarity=0.020 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhccCcHHHHHHHHHHHHHHh-CCCCChhhhhhhcccc
Q 022641 214 LSEEVMSSRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLF-GSSITSKDLISVSGYP 280 (294)
Q Consensus 214 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~G~~r~~~~~l~~~~~~~-~~~it~~~v~~~~~~~ 280 (294)
++..-+..+++... .+..++.++...+.+.+.-=+..+.......+... .+.|+.+||..++...
T Consensus 5 LP~a~I~kI~K~~~--~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~ 70 (135)
T d1jfib_ 5 IPRAAINKMIKETL--PNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESL 70 (135)
T ss_dssp CCHHHHHHHHHHHS--TTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhCC--ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHc
Confidence 34455666665544 24568888888888766533333333333333333 5679999999888763
No 398
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=23.04 E-value=34 Score=23.92 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=21.8
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
+.+.++|+|.|-||=|.|...|+..-
T Consensus 2 ~~~~~~I~g~pRSGTT~L~~~L~~~p 27 (265)
T d1texa_ 2 HPTAYLVLASQRSGSTLLVESLRATG 27 (265)
T ss_dssp CCCEEEEEECTTSTHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCChHHHHHHHHHcCc
Confidence 45679999999999999988887753
No 399
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=22.79 E-value=32 Score=25.37 Aligned_cols=39 Identities=10% Similarity=0.179 Sum_probs=26.7
Q ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEecCCc
Q 022641 155 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYIS 196 (294)
Q Consensus 155 ~~~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~~~~~ 196 (294)
+..+|++||++-+++.....+..+.. ....+++++....
T Consensus 206 ~~~~i~vDE~QD~~~~~~~~l~~~~~---~~~~~~~~GD~~Q 244 (306)
T d1uaaa1 206 KIRYLLVDEYQDTNTSQYELVKLLVG---SRARFTVVGDDDQ 244 (306)
T ss_dssp TCSEEEESCGGGCBHHHHHHHHHHHT---TTCCEEEECCGGG
T ss_pred HhhHHHHHHHHHhhHHHHhhhhhccc---CCCcceEeecCcc
Confidence 45699999999999987777665543 2334566664433
No 400
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=22.47 E-value=83 Score=19.38 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=40.5
Q ss_pred cEEEEEeC-CCCCCHHHHHHHHHHHHhhcCcceEEEEe-cCC-cccchHhhccccEEEecCCCHHHHHHHHHHHHH
Q 022641 156 YKIIILDE-ADSMTEDAQNALRRTMETYSKVTRFFFIC-NYI-SRIIEPLASRCAKFRFKPLSEEVMSSRVLHICN 228 (294)
Q Consensus 156 ~~lliiDe-i~~l~~~~~~~L~~~l~~~~~~~~ii~~~-~~~-~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~ 228 (294)
++++++|= ....+ ..+.+..+-.. .....+|+.| ... ......+..-+..+-.+|.+.+++...++..++
T Consensus 47 ~dlillD~~mp~~~--G~~~~~~~r~~-~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~lr 119 (121)
T d1mvoa_ 47 PDLIVLDVMLPKLD--GIEVCKQLRQQ-KLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR 119 (121)
T ss_dssp CSEEEEESSCSSSC--HHHHHHHHHHT-TCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred ccEEEecccccCCC--Cchhhhhhhcc-CCCCEEEEEEeeCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHc
Confidence 35999994 33333 23334433333 3334445444 332 223334444556788899999999999987765
No 401
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]}
Probab=22.21 E-value=72 Score=24.11 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=34.9
Q ss_pred CchhhhhcCCCcchhhcccHHHHHHHHHHHHcC-CCCcEEEECCCCCCHHHHHHHHHHHh
Q 022641 48 SQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETA-NCPHMLFYGPPGTGKTTTALAIAHQL 106 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~-~~~~ill~Gp~G~GKT~la~~la~~~ 106 (294)
..||.+.-.|. ...+..+.+++... ....++++.-.|.|.|+++.++..-+
T Consensus 185 ripi~D~~~P~--------~~~id~~i~~i~~~~~~~~ivvhc~~g~~rt~~~~~~~~~~ 236 (313)
T d2pt0a1 185 RIAATDHVWPT--------PENIDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDML 236 (313)
T ss_dssp EEEECTTSCCC--------HHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred EecCCCCCCCC--------HHHHHHHHHHHHhCCCCCCEEEECCCCCcHHHHHHHHHHHH
Confidence 34665555553 34466666666553 33459999999999999999987554
No 402
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]}
Probab=21.79 E-value=23 Score=25.19 Aligned_cols=85 Identities=9% Similarity=0.067 Sum_probs=43.0
Q ss_pred EEEEEeCCCCCCHHH--HHHHHHHHHhhcCcceEEEEecCCcccchHhhccccEEEecCCCHHHHHHHHHHHHHHhCCCC
Q 022641 157 KIIILDEADSMTEDA--QNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRVLHICNEEGLNL 234 (294)
Q Consensus 157 ~lliiDei~~l~~~~--~~~L~~~l~~~~~~~~ii~~~~~~~~~~~~l~~r~~~i~~~~~~~~~~~~~l~~~~~~~~~~~ 234 (294)
.++|+|++..-.+.. ...++..+.- .....+++...+ ..+..+.++ +.-+.+-+...-...+++ ....+-+
T Consensus 122 ~l~Vvd~~~~~~~KTK~~~~~L~~l~l-~~~~~vl~v~~~-en~~~s~rN-i~~v~v~~~~~lNv~dlL----~~~~lvi 194 (208)
T d2j01f1 122 KLLLVEAFAGVNGKTKEFLAWAKEAGL-DGSESVLLVTGN-ELVRRAARN-LPWVVTLAPEGLNVYDIV----RTERLVM 194 (208)
T ss_dssp CEEEECCCCCCSSCHHHHHHHHHHHTC-CSSSCEEEECSC-HHHHHHHTT-CTTEEEECGGGCCHHHHH----HSSEEEE
T ss_pred CceeeccccccccccHHHHHHHHHhcc-ccccceeeccch-hHHHHHHhC-CCCCEEeecCCccHHHHh----cCCcEEE
Confidence 499999987654332 2223333322 222334444432 223333322 223344344433445555 3445668
Q ss_pred CHHHHHHHHhhccC
Q 022641 235 DAEALSTLSSISQG 248 (294)
Q Consensus 235 ~~~~l~~l~~~~~G 248 (294)
+.++++.|.+..+|
T Consensus 195 t~~Al~~L~erl~G 208 (208)
T d2j01f1 195 DLDAWEVFQNRIGG 208 (208)
T ss_dssp EHHHHHHHHHTCC-
T ss_pred EHHHHHHHHHHhCc
Confidence 99999999888776
No 403
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=21.38 E-value=71 Score=20.44 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=24.7
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhhcCcceEEEEe
Q 022641 157 KIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC 192 (294)
Q Consensus 157 ~lliiDei~~l~~~~~~~L~~~l~~~~~~~~ii~~~ 192 (294)
+.++|||.-..++.....-++.+...+.+ .+++.+
T Consensus 13 g~~iIdDsYNAnP~Sm~aAl~~l~~~~~~-ki~vLG 47 (135)
T d1gg4a1 13 NQLLLDDSYNANVGSMTAAVQVLAEMPGY-RVLVVG 47 (135)
T ss_dssp TEEEEECCSCCCHHHHHHHHHHHHHSSSE-EEEEEC
T ss_pred CcEEEecCCcCCHHHHHHHHHHhhccCCC-ceEEEc
Confidence 36789999999888777666777776544 344444
No 404
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=21.12 E-value=90 Score=19.28 Aligned_cols=49 Identities=14% Similarity=0.174 Sum_probs=27.7
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHhhcCcc-eEEEEec---CCcccchHhhccccE
Q 022641 158 IIILDEADSMTEDAQNALRRTMETYSKVT-RFFFICN---YISRIIEPLASRCAK 208 (294)
Q Consensus 158 lliiDei~~l~~~~~~~L~~~l~~~~~~~-~ii~~~~---~~~~~~~~l~~r~~~ 208 (294)
.+++|-+|. +.....+.+.+....... .+++.+. +...+...+...+..
T Consensus 13 ~iilD~AHN--~~~~~~l~~~l~~~~~~~~~~v~g~~~dKd~~~~l~~l~~~~~~ 65 (129)
T d2gc6a1 13 LIVIDGAHN--PDGINGLITALKQLFSQPITVIAGILADKDYAAMADRLTAAFST 65 (129)
T ss_dssp TEEECCCCS--HHHHHHHHHHHHHHCSSCCEEEECCC----CCSSSSTTTTTCSE
T ss_pred cEEEECCCC--HHHHHHHhhccccccchhhhhhccccCCccHHHHHHhhhhhCCe
Confidence 578999887 456677777776655443 3333332 223345555555553
No 405
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.88 E-value=29 Score=24.87 Aligned_cols=24 Identities=13% Similarity=0.214 Sum_probs=19.8
Q ss_pred CCCcEEEECCCCCCHHHHHHHHHH
Q 022641 81 NCPHMLFYGPPGTGKTTTALAIAH 104 (294)
Q Consensus 81 ~~~~ill~Gp~G~GKT~la~~la~ 104 (294)
+.|+++|+|.|-||=|.|...|++
T Consensus 4 ~lP~~~iiG~prsGTT~L~~iL~~ 27 (258)
T d1vkja_ 4 QLPQTIIIGVRKGGTRALLEMLSL 27 (258)
T ss_dssp CCCSEEEEECTTSSHHHHHHHHHT
T ss_pred CCCCEEEECCCCchHHHHHHHHHc
Confidence 457899999999998888777754
No 406
>d2gxba1 a.4.5.19 (A:140-198) Z-alpha domain of dsRNA-specific adenosine deaminase, ADAR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.49 E-value=7.5 Score=21.40 Aligned_cols=15 Identities=47% Similarity=0.669 Sum_probs=13.6
Q ss_pred CCCHHHHHHHHHHHh
Q 022641 92 GTGKTTTALAIAHQL 106 (294)
Q Consensus 92 G~GKT~la~~la~~~ 106 (294)
|=|||+.|+.+|..+
T Consensus 12 g~~~~~tA~~LA~kl 26 (59)
T d2gxba1 12 GEGKATTAHDLSGKL 26 (59)
T ss_dssp CTTCCBCHHHHHHHH
T ss_pred CCccchhHHHHHHHh
Confidence 568999999999998
No 407
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.04 E-value=55 Score=24.28 Aligned_cols=42 Identities=5% Similarity=0.025 Sum_probs=27.4
Q ss_pred CCcEEEEEeCCC-CCCHHHHHHHHHH-HHhhcCcceEEEEecCC
Q 022641 154 PPYKIIILDEAD-SMTEDAQNALRRT-METYSKVTRFFFICNYI 195 (294)
Q Consensus 154 ~~~~lliiDei~-~l~~~~~~~L~~~-l~~~~~~~~ii~~~~~~ 195 (294)
.++.++++||.- .|++.....+++. +........+|+++.+.
T Consensus 175 ~~p~illLDEPts~LD~~~~~~i~~~~~~~~~~~~tvi~itH~~ 218 (281)
T d1r0wa_ 175 KDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKM 218 (281)
T ss_dssp SCCSEEEEESCCCSSCHHHHHHHHHHCCCCCTTTSEEEEECSCH
T ss_pred hCccchhhcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEechH
Confidence 345699999975 6777776666654 44434455677777654
Done!