BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022643
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/282 (52%), Positives = 213/282 (75%), Gaps = 1/282 (0%)
Query: 13 IIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLP 72
+++ S S L V+ ++D++P FTG++EA+V A++M+IY+V +NQLSDVE+DKVNKPYLP
Sbjct: 113 VLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLP 172
Query: 73 LASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGN 132
LASGE S+ TGIAI + ++MS ++ S P WA+ +GTAYS+ LPLLRWK
Sbjct: 173 LASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRF 232
Query: 133 SFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDL 192
+ +AA C++++ ++ Q Y+HIQ +V GRP+ +FTRPL+FATAF+S F VVIA KD+
Sbjct: 233 ALVAAMCILAVRAIIVQIAFYLHIQTHVFGRPI-LFTRPLIFATAFMSFFSVVIALFKDI 291
Query: 193 HDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGI 252
D++GDK FGI++ SV LG++RVF V++L +AY A++VGA+SPF+ +K+I+++GH I
Sbjct: 292 PDIEGDKIFGIRSFSVTLGQKRVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVI 351
Query: 253 LASIFWLRVRAVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 294
LA+ W R ++VDLS I S YMFIWKL+YAEYLL+PF++
Sbjct: 352 LATTLWARAKSVDLSSKTEITSCYMFIWKLFYAEYLLLPFLK 393
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 286 bits (733), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 202/281 (71%), Gaps = 1/281 (0%)
Query: 14 IATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPL 73
++ S SLL V+ L+D++P + TGL+EA+V A+ M+IY+V +NQL D+E+DKVNKP LPL
Sbjct: 125 LSIVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPL 184
Query: 74 ASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNS 133
ASGE S TG+A+ A A MS + S P A+ +GTAYS+ LP LRWK ++
Sbjct: 185 ASGEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSA 244
Query: 134 FLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLH 193
+AA C++++ ++ Q ++HIQ +V RP +FTRPL+FATAF++ F VVIA KD+
Sbjct: 245 VVAALCILAVRAVIVQLAFFLHIQTFVFRRP-AVFTRPLIFATAFMTFFSVVIALFKDIP 303
Query: 194 DVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGIL 253
D++GD+ FGIK+ SV LG+++VF + V +L +AY A+++GA+S L +K T++GH IL
Sbjct: 304 DIEGDRIFGIKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAIL 363
Query: 254 ASIFWLRVRAVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 294
A+I W R R++DL+ +I SFYMFIWKL+YAEYLLIP VR
Sbjct: 364 AAILWNRSRSIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR 404
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 256 bits (655), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 188/282 (66%), Gaps = 1/282 (0%)
Query: 13 IIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLP 72
++ T SL+ V+ L+DL+ A+F G ++ +V + +HI+ V +NQL D+E+DK+NKP LP
Sbjct: 130 VLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVICIHIFGVGLNQLCDIEIDKINKPDLP 189
Query: 73 LASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGN 132
LASG++S + IT +S ++ L +A ++ S P W V V +AY+V LPLLRWK
Sbjct: 190 LASGKLSFRNVVIITASSLILGLGFAWIVDSWPLFWTVFISCMVASAYNVDLPLLRWKKY 249
Query: 133 SFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDL 192
L A ++ + ++H+Q V RP F RPL+F TA +S + +VIA KD+
Sbjct: 250 PVLTAINFIADVAVTRSLGFFLHMQTCVFKRP-TTFPRPLIFCTAIVSIYAIVIALFKDI 308
Query: 193 HDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGI 252
D++GD+KFGI++LS+ LG +RVF + VS+L + YG ++VGA+SP L +K+IT++GH +
Sbjct: 309 PDMEGDEKFGIQSLSLRLGPKRVFWICVSLLEMTYGVTILVGATSPILWSKIITVLGHAV 368
Query: 253 LASIFWLRVRAVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 294
LAS+ W ++VDL+ N + SFYMFIWKL+ AEY LIP R
Sbjct: 369 LASVLWYHAKSVDLTSNVVLHSFYMFIWKLHTAEYFLIPLFR 410
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 185/295 (62%), Gaps = 5/295 (1%)
Query: 4 FLFFVFMYQIIATT----SNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLS 59
F +F + Y +I T S+SLL V+ L+D++ ++ G+++ ++P + + IY+ +NQL
Sbjct: 116 FYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQLY 175
Query: 60 DVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTA 119
D+E+DK+NKP+LP+ASG+ S TG+ I+ A +S + + S P I ++ TA
Sbjct: 176 DLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWTA 235
Query: 120 YSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFI 179
YS+ +PLLRWK F+AA CM+S L + H+Q VL RP+ F R L F AF+
Sbjct: 236 YSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIG-FPRSLGFLVAFM 294
Query: 180 SCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSPF 239
+ + + +A KD+ DV+GDK+ GI + +V LG++R F + VS +A+G ++ GAS
Sbjct: 295 TFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCSH 354
Query: 240 LANKLITIIGHGILASIFWLRVRAVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 294
K+ T +G+ +LASI W + ++VDLSD AS SFYMFIWKL YA + L+ +R
Sbjct: 355 FWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMFIWKLLYAGFFLMALIR 409
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 146/258 (56%), Gaps = 8/258 (3%)
Query: 39 MEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYA 98
+ L+ + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ + + + A+ L
Sbjct: 134 LSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGL-LV 192
Query: 99 VMIRSPPFIWAVIA-WIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQ 157
V PFI ++ + +F+GT YSV P LR K A + ++ G L F VY H
Sbjct: 193 VGFNFGPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY-HAT 249
Query: 158 KYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFR 217
+ LG P + ++ P+ F T+F++ F +VIA KDL DV+GD+KF I TL+ LG +
Sbjct: 250 RAALGLPFQ-WSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAF 308
Query: 218 LSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILASIFWLRVRAVDLSD--NASILSF 275
L +L + Y +A+ + P + + I H ILAS + ++ ++ +I +
Sbjct: 309 LGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAISGY 368
Query: 276 YMFIWKLYYAEYLLIPFV 293
Y FIW L+YAEYLL PF+
Sbjct: 369 YRFIWNLFYAEYLLFPFL 386
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 16/260 (6%)
Query: 41 ALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTG--IAITLASALMSLAYA 98
LV + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ T + + A+A S+
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSI--- 185
Query: 99 VMIRSPPFIWAVIA-WIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQ 157
V+ PFI ++ +F+GT YSV P R K A + ++ G L F VY +
Sbjct: 186 VVTNFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YAT 242
Query: 158 KYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFR 217
+ LG + ++ P+ F T F++ F +VIA KDL DV+GD+K+ I TL+ LG +
Sbjct: 243 RAALGLTFQ-WSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAF 301
Query: 218 LSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILAS--IF--WLRVRAVDLSDNASIL 273
L +L Y AA+ V P + + + H LA IF W+ +A D +I
Sbjct: 302 LGSGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKD--AIS 359
Query: 274 SFYMFIWKLYYAEYLLIPFV 293
+Y FIW L+YAEY+ P +
Sbjct: 360 QYYRFIWNLFYAEYIFFPLI 379
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 30/217 (13%)
Query: 9 FMYQIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNK 68
FM +IATT TP +F L+ +V + YV IN + D+EVDK+NK
Sbjct: 23 FMGYVIATT----------WKFTPLFFLPLL--VVSLIAAGGYV--INDVYDIEVDKINK 68
Query: 69 PYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLR 128
P PL SG I++ ++ + L ++ + PF +A+I + + Y+ L L
Sbjct: 69 PERPLPSGRIAVNIARRFSIVLFAVGLIISIPLGLIPFGFALITIVLL-YEYARSLKKLG 127
Query: 129 WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAF 188
GN +V+L L+ + Y + G L F P T +I F + F
Sbjct: 128 LVGN------FIVALTSALSAY--YGGLAS---GSLLGNFIIP----TIYIFFFTLSREF 172
Query: 189 IKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSI 225
+K + D++GDK+ G+ TL+V LG++ + ++ +L I
Sbjct: 173 VKGIEDIEGDKRNGVNTLAVKLGEKSTWIIAKIILGI 209
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN D E+D++N+P PL G + T + +L + LA A++I F +A++A+I
Sbjct: 56 INDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAYI 115
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 174
+ Y+ +L L + GN +AA V+ P+Y I +G +
Sbjct: 116 TM-FLYAWKLKPLPFIGNIAVAALTGVT--------PLYGAIAVGKIG----------LA 156
Query: 175 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 214
T + F V +A +KD+ DV+GD K G KTL ++LG+ +
Sbjct: 157 GTLAVCAFLVNVAREIVKDIEDVEGDLKKGAKTLPIILGRRK 198
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASAL--MSLAYAVMIRSPPFIWAVIA 112
IN D E+DK+N+P PL G +MG +A+ + L + LA A MI FI VIA
Sbjct: 56 INDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGVIA 113
Query: 113 WI--FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 170
++ F+ Y+ +L L + GN +A GL P+Y + LG
Sbjct: 114 YVTMFI---YAWKLKPLPFVGNIVVA--------GLTGATPLYGAVAVEHLG-------- 154
Query: 171 PLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 214
+ I F V +A IKD+ DV+GD G KTL ++ GK+R
Sbjct: 155 --LAGYLAICAFLVNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN D E+D +NKPY P+ SG IS + I +A +L +A ++ + FI +I
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFL---GFIEFLIVT 110
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
F + Y+ RW + + +VSL T ++ + L + IF+
Sbjct: 111 AFSLSWYAYA----RWLKRTGVPGNALVSLGVAFTL--IFGSLAAGNLTNKVIIFS---- 160
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER----VFRLSVS 221
+ AF S + F+K + D+ GD+ G++T++V +G +R VF LS++
Sbjct: 161 -SVAFTSNL--IREFVKAVEDLPGDRAHGVRTIAVRIGVKRTGILVFLLSLA 209
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
A N D VD +N+P+ P+ SG I G+ I +A +L+SL W + +W
Sbjct: 70 AANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVG---------WQLGSW 120
Query: 114 IFVGT--------AYSVQLPLLRWKGNSFLAAFCMVSLNGL--LTQFPVYVHIQKYVLGR 163
FV T AYSV+ P+ + + ++ GL +T V + G
Sbjct: 121 GFVATLLGVAAAWAYSVE-PIRLKRSGWWGPGLVGLAYEGLPWITGAAVLLATADTSPGF 179
Query: 164 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSML 223
P+ +M AT + + I I D ++GD+K GIK+L + G E +++ +++
Sbjct: 180 PI------VMMATLY-ALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIACTVM 232
Query: 224 SIAYGAAVVVGA----SSPFLANKLITIIGHGILASIFWLR 260
+A A+V+ S P+ A ++ ++ A W+R
Sbjct: 233 GLAQ--ALVITMLYLFSKPYHATAVLVLLCGQFWAMSVWMR 271
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
A N D VD VN+P P+ SG I G+ I L ++SLA M+ P A +
Sbjct: 69 AANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWML-GPWGFGATVFG 127
Query: 114 IFVGTAYSVQLPLLRWKG--NSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRP-LEIFTR 170
+ AYSV+ L+ G L A C L P + G P I T
Sbjct: 128 VLAAWAYSVEPIRLKRSGWWGPGLVALCYEGL-------PWFTGAAVLSAGAPSFFIVTV 180
Query: 171 PLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 226
L++A I + D ++GD++ G+++L VMLG E +L+ +++++A
Sbjct: 181 ALLYAFGAHG-----IMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN + D+E+DK+NKP PL SG I + ++++ L+ + +V++ FI A++ +
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLT-V 114
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVS-LNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
Y+ L GN +A +S G L F +V+ R L+
Sbjct: 115 LALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFE-----GSWVI--------RTLI 161
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSI 225
T +I F + F+K + DV GD G+KTL+V +G E+ + +S +L I
Sbjct: 162 -PTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVI 212
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN + DVE+DK+NKPY P+ SG+IS+ A+++A ++ +A ++++ + A++ I
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAI 115
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSL-NGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
+ Y+ L + GN +A +S+ G L F ++L ++
Sbjct: 116 GL-IYYAKDLKKTGFYGNLLVATTTALSIFYGGLAFFS-----DNWLL---------RII 160
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 219
T + ++ +K + D +GD +KTL+ LG + +R++
Sbjct: 161 IPTLYAFFLTLIREIVKGIEDYNGDSLNNVKTLATTLGINKSWRIA 206
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN DVE+DK+N+P P+ G I+ + + L A+++ F++A+ A+
Sbjct: 56 INDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY- 114
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY--VHIQKYVLGRPLEIFTRPL 172
F+ Y+ +L L + GN V++ L P+Y V + + L L I
Sbjct: 115 FLTFVYAWKLKPLPFIGN--------VTVALLTAATPIYGAVGVGRIDLAGYLAI----- 161
Query: 173 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 214
AF+ V +KD+ D +GDK+ G +TL +M+GK++
Sbjct: 162 ---CAFL--VNVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN D E+DK+N+P PL G +S + ++A + A I F+ A++A++
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFINIWDFLLAIVAYV 115
Query: 115 --FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 172
F+ Y+ +L + + GN +A SL G P+Y I +G
Sbjct: 116 TMFI---YAWKLKPMPFIGNVVVA-----SLTG---ATPLYGAIAVGEIG---------- 154
Query: 173 MFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 214
+ T + F V +A IKD+ D++GD G KTL +++G++R
Sbjct: 155 LAGTLALCAFLVNVAREVIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 25/163 (15%)
Query: 56 NQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMS--LAYAVMIRSPPFIWAVIAW 113
N D E+DK+N+P PL G +S + L + LAY + IR+ F++A IA+
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRA--FVFATIAY 114
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
F+ Y +L L GN +AA + P+Y I +G +
Sbjct: 115 -FLTFLYGWKLKPLPLVGNITVAALTAAT--------PIYGAIGVGRIG----------L 155
Query: 174 FATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 214
I F V ++ +KD+ D++GDK G +TL +++G+++
Sbjct: 156 AGYLAICAFLVNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN DVE+D+VN+P P+ G I + L ++ LA A + ++A+ A+
Sbjct: 56 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYA 115
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 174
Y+ +L L + GN V++ L P+Y + +G +
Sbjct: 116 LT-FIYAWKLKPLPFIGN--------VAVALLTAATPIYGALGVGRVG----------LA 156
Query: 175 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 219
I F V ++ +KD+ D++GD K G KTL +++GK R +S
Sbjct: 157 GYLAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMIS 203
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN D E+DK+N+P PL G +S + ++ +++ A +I FI+A+ A++
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFIFALGAYL 115
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 174
+ Y+ +L K F+ + +L G+ P+Y I +G +
Sbjct: 116 LM-YLYARKL-----KPQPFIGNLVVATLTGIT---PIYGAIAVGKIG----------LA 156
Query: 175 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 220
+ F V +A KD+ D++GDK G KTL ++ G E ++ V
Sbjct: 157 GYLALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIESSSKIGV 204
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 46/217 (21%)
Query: 30 LTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLA 89
+T A+ TG + A + A AIN D +DK+N+P P+ G IS I
Sbjct: 40 VTTAHVTGAVAATIFATAAG---NAINDYFDRAIDKINRPMRPIPRGAISERGAIVF--- 93
Query: 90 SALMSLAYAVMIRSPPFIWAVIAW--IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLL 147
S + +A V P I V+A + AY+ L GN+ +A
Sbjct: 94 SGFLFVAAVVSTSVLPLIAIVLALMNLLALVAYTELFKGLPGVGNAIVA----------- 142
Query: 148 TQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFI------------KDLHDV 195
Y+ ++ G A I+ F VV+ FI KD+ D+
Sbjct: 143 -----YLTGSTFLFGAA----------AIGRITDFGVVVLFILAALATATREIIKDIEDL 187
Query: 196 DGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVV 232
DGD+K G++TL +++G +R++ +L +A A++V
Sbjct: 188 DGDRKEGLQTLPIVIGVTPAYRVATGVLLVAVIASIV 224
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 72/217 (33%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGI---------AITLA-------------SA 91
+N D+E+DKVNKP P+ SG+IS+ + + ITLA ++
Sbjct: 61 GLNDYFDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVNPLCGIIALFNS 120
Query: 92 LMSLAYAVMIRSPPFIW-AVIAWIFVGTAYSVQLPLLRWKGNSFL---AAFCMVSLNGLL 147
++ + YA ++ PF A + ++ G++FL A F M L L+
Sbjct: 121 MVLILYAQSLKRTPFFGNASVGYL---------------TGSTFLFGGAVFGMAGLQALV 165
Query: 148 TQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLS 207
F L L R + +KD+ D+ GDKK G +TL
Sbjct: 166 VLF----------LLATLATIAREI----------------VKDVEDIVGDKKDGARTLP 199
Query: 208 VMLGKERVFRLSVSMLSIAYGAAVVVGASSPFLANKL 244
+++G ++ S ++ A+G ++ + P+L + L
Sbjct: 200 ILIGAKK-----ASYIAAAFGFTAMLASPVPYLQSIL 231
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
IN D E+D++N P P+ SG+I + + +L L+S+ +I I ++
Sbjct: 50 TINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCT 109
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
I + Y+ L K F+ C+ L GL F + + LG L F
Sbjct: 110 ILM-IIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLIT-KDVNLGFILGFF----- 157
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 220
AF+ I IKD+ D++GDKK TL ++ G ++ L+V
Sbjct: 158 ---AFLMTLSREI--IKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
A+N + D+E+DK+NKP PL S +IS+ + T+ S L+ ++ ++I I IA
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSA---TIFSYLLMIS-GIIISLFNMICFAIAL 113
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
I + + L ++K N + + L G +++ V + + ++
Sbjct: 114 I---NSIVLYLYAKKYKRNKIIGNLIVAYLTG-----SIFIFGGASVGNVEITL----IL 161
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 216
F A + + I IKD D+DGDK G+ +L + GK +F
Sbjct: 162 FLCALFATWSREI--IKDYEDLDGDKSEGVISLPIKYGKNSIF 202
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 51 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 109
Y IN D ++D +N+PY P+ SG IS I A L L ++ +WA
Sbjct: 139 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLD----VWAG 194
Query: 110 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 162
+I ++ VG +Y P L+ K N ++ F + + Y+ + +
Sbjct: 195 HDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 245
Query: 163 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSM 222
T ++ T+ S + IA + D V+GD+ G+++L V G E + V
Sbjct: 246 ALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGA 305
Query: 223 LSI 225
+ I
Sbjct: 306 IDI 308
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 19/167 (11%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN D EVD VN+P P+ SG +S + L + + A +I
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINR--------MC 102
Query: 114 IFVGTAYSVQLPLLRWK-GNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 172
+ + SV L L W+ + L MVS Y+ ++ G + P
Sbjct: 103 LAIAALNSVLLYLYSWRLKGTPLIGNVMVS----------YLVGSCFLFGAAVGQRPAPA 152
Query: 173 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 219
++ +V +KDL DV+GD G+KTL + G+ R++
Sbjct: 153 VWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVALRVA 199
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 45/188 (23%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGT-----------GIAITLASALMSLAYAVMIRS 103
IN + DVE+D++N+P P+ +G+IS+ GIAI + + LA A++
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAIINSV 113
Query: 104 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQF-PVYVHIQKYVLG 162
++AV R K L + L G + F + I+ V
Sbjct: 114 ILIVYAV-----------------RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLVRN 156
Query: 163 RPLEIFTRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLG--KERVFRL 218
L T F IA +KD DVDGD G +TL +++G K +F
Sbjct: 157 LSLAAIT------------FLATIARELLKDAEDVDGDAAGGARTLPMIVGVRKTGIFAF 204
Query: 219 SVSMLSIA 226
+ + ++A
Sbjct: 205 ACACGAVA 212
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 41 ALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVM 100
A+V VL AIN D ++D +N+P P+ G +S A+ + AL ++A +
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRG--ALVYSVALFAVAVVLT 99
Query: 101 IRSPPFIWAVIAWIFVG-TAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKY 159
+ P A+ A V AY+ L GN+ +A L G +++
Sbjct: 100 LLLPWLAIAIAAINLVALVAYTEVFKGLPGVGNALVA-----YLTG-----STFLYGGAA 149
Query: 160 VLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 214
V G ++ ++FA A +C + +KD+ D+DGD+ G++TL +++G+ R
Sbjct: 150 VGG---DLAAVVVLFALA--ACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 51 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 109
Y IN D ++D +N+PY P+ SG IS I L L ++ IWA
Sbjct: 141 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLD----IWAG 196
Query: 110 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 162
+I ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 197 HDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 247
Query: 163 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSM 222
T ++ T S + IA + D ++GD+ G+++L V G E + V
Sbjct: 248 ALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGA 307
Query: 223 LSI 225
+ I
Sbjct: 308 IDI 310
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 67/188 (35%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 114 IFVGTAY-SVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 166
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLT-------YTQYLKGRPGAGNAL 135
Query: 167 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 208
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 209 MLGKERVF 216
++G +R
Sbjct: 194 VVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 67/188 (35%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 114 IFVGTAY-SVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 166
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLT-------YTQYLKGRPGAGNAL 135
Query: 167 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 208
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 209 MLGKERVF 216
++G +R
Sbjct: 194 VVGHQRAL 201
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 51 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 109
Y IN D ++D +N+PY P+ SG IS I L L A ++ +WA
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILD----VWAG 205
Query: 110 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 162
+ ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 206 HTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGA---------SYISLPWWAGQ 256
Query: 163 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER-----VFR 217
T ++ T S + IA + D V+GD+ G+++L V G E V
Sbjct: 257 ALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGA 316
Query: 218 LSVSMLSIAYGAAVVVGASSPFLANKLITII 248
+ ++ LS+ A ++ + P+ A L+ +I
Sbjct: 317 IDITQLSV---AGYLLASGKPYYALALVALI 344
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN D E+D VN+P P+ SG IS + ++A + A +I A++
Sbjct: 52 AINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLINQSCLALALLNS 111
Query: 114 IFVGTAYSVQLPLLRWKGN---SFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 170
FV Y+ +L L GN S+L L G L P +
Sbjct: 112 -FVLIIYAARLKGLPVAGNIAISYLTGTTF--LFGGLAASPSSI---------------- 152
Query: 171 PLMFATAFISCFCVVIAF----IKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 226
TAF+S + +KD+ D+ GD G KTL +GK + F L+ +L +A
Sbjct: 153 -----TAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 25/171 (14%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAV-IAW 113
+N D+E+DKVN+P P+ SG++S A+ A L + A + IW + IA
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKG--AVVWAGILFAAGVAAACFTN--IWCLAIAL 109
Query: 114 IFVGTAYSVQLPLL---RWKGNSFLAAFCMVSLNGLLTQFPVY-VHIQKYVLGRPLEIFT 169
+ +V L ++ ++KG FL + L+G + F + V + +++ PL
Sbjct: 110 V------NVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVMLPL---- 159
Query: 170 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 220
FA F + +KD D++GD+ G +TL + +G + L+V
Sbjct: 160 ----FAITFFG--TLARELLKDAEDIEGDRLGGARTLPMQIGVRKTSVLAV 204
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLA 96
AIN + DVE+D++NKP P+ SG +S+ T A +L+ LM +
Sbjct: 53 AINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVG 93
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 51 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAV 110
Y IN + D+E+D++NKP PL SG+I + + ++ L ++ I I AV
Sbjct: 57 YGNVINDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAV 116
Query: 111 IAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 170
I +F+ + F + L G V + V G+ +
Sbjct: 117 INALFLYLYAKKYKKYKP------IGNFIIGYLTG-------SVFLFGGVAGK--NVMPV 161
Query: 171 PLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 216
++F + +S + I +KD D++GDKK G+ +L + GK+ ++
Sbjct: 162 VILFLCSLLSIWGREI--VKDFEDMEGDKKEGVISLPIKYGKKSLY 205
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAV-MIRSPPFI---WAV 110
IN D+E D V KP+ P+ SG +S G A A L ++ + ++ P FI +AV
Sbjct: 65 INDYYDIETDMVAKPWRPIVSGRVSPGA--ARFYAYMLFTIGLIIALVTCPNFIVFGFAV 122
Query: 111 IAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIF 168
+ + V YS RW + L +++ N T ++ + G+ + +
Sbjct: 123 LNALLV-HEYS------RWIKRTGLPGNIVIAFNSASTIVFGALYASCMIKGKVVLPSVA 175
Query: 169 TRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 219
P+++A F +V+ F+K + DV GD GI TL+V G + S
Sbjct: 176 LIPVLYA------FLLVLGREFVKGIEDVKGDAIAGIGTLAVRFGVRTAYMAS 222
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
IN D +D +N+P P+ SG +S +A + L+ LA +V +P + +
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSVFT-TPLCMGIALVNA 112
Query: 115 FVGTAYSVQLPLLRWKGNS---------FLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL 165
+ Y+ +L + GN+ FL + LL P+ +L R L
Sbjct: 113 LLLVLYAARLKSTPFFGNAAVAFLSASIFLFGGAYAGWHALLDMLPIAAITFLAMLAREL 172
Query: 166 EIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSI 225
+KD D++GD+ G TL++ +G + ++ + +
Sbjct: 173 -----------------------LKDAEDIEGDRAHGADTLAIRIGVRKTALIAFACTAF 209
Query: 226 AYGAAVV 232
A A+ V
Sbjct: 210 AIAASAV 216
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 36/168 (21%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIW-----A 109
IN D E+D +N+P P+ SG+I G + + L+ A++ P +
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPLAGIAMGNS 113
Query: 110 VIAWIFVGTAYSVQLPLLRWKGNSFLAA------FCMVSLNGLLTQFPVYVHIQKYVLGR 163
VI W++ ++ + PL+ S+LAA + G+++ FP+ +L R
Sbjct: 114 VILWLY--ASFLKKTPLIGNISVSYLAASIFLFGGAIQGTQGIISVFPIAGATWGVMLAR 171
Query: 164 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 211
L IKD D+ GD + G +T ++ G
Sbjct: 172 EL-----------------------IKDAEDMPGDNEHGARTFPLLYG 196
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTG-----IAITLASAL---MSLAYAVMIRSPPF 106
IN D E+D +N+P P+ SG IS G I LAS + + L +++ S
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSL 110
Query: 107 IWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLE 166
+ AW R K + + L GL F VLG E
Sbjct: 111 LMVYYAW--------------RLKKRCLVGNITISFLTGLSFVF------GGIVLG---E 147
Query: 167 IFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 226
+ L+ AF+ I +KD+ DV+GD+ G TL + G L+ S + IA
Sbjct: 148 VRASILLGFYAFLMTMAREI--VKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLIA 205
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 37/172 (21%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
AIN DV +D +N+P P+ SG + + A+ + L +L + P I VIA
Sbjct: 69 AINDYFDVRIDSINRPDRPIPSGRMKLKE--ALYFSYTLFALGTLLAFSINP-ICGVIAL 125
Query: 114 -----------IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 162
GT L + G+SFL + L GL F +++ +
Sbjct: 126 FNSLVLIFYAKTLKGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLAALAITA 185
Query: 163 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 214
R + +KD+ D++GDK G TL + +G ++
Sbjct: 186 REI-----------------------VKDIEDMEGDKMEGADTLPLRVGAKK 214
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 37.7 bits (86), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
A+N + D+++DK+NKP P+ S IS+G + +M L + M F+ AV+
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIIS-MFNITCFLMAVLNS 114
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
I + S +K N + + L G + F +G I ++
Sbjct: 115 IVLQQYAST------YKKNKIVGNLIVAYLTGSVFIF------GGIAVG---NIDVTIML 159
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 216
F A + + I IKD D++GD K + ++ + G++ ++
Sbjct: 160 FLCALFAMWSREI--IKDYEDIEGDIKEKVISIPIKCGEKSIY 200
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 190 KDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAY---GAAVVVGASSPFL 240
++ D++ DKK G KTL++++G + L + ++AY V+ GA+SP+L
Sbjct: 204 NNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVITGAASPWL 257
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
+N +D EVD +N+P+ + SG++S+ +T + + A+ + + + +
Sbjct: 85 VNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALFLGRQVAFFVALGLV 144
Query: 115 FVGTAYSVQLPLLRWKGNSFLA-AFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIFTRP 171
F AYS++ +R K N ++ A +S GL + + PL E T
Sbjct: 145 FA-LAYSLR--PIRGKRNGWIGNALVAISYEGL-------AWMAGHAAFAPLTGESVTIA 194
Query: 172 LMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 226
L++ S I + D + GD GI+++ V GK R+ V+ + +A
Sbjct: 195 LLY-----SLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVA 244
>sp|A1TJR2|UBIA_ACIAC 4-hydroxybenzoate octaprenyltransferase OS=Acidovorax citrulli
(strain AAC00-1) GN=ubiA PE=3 SV=1
Length = 295
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 46 VLMHIYVVAINQLSDVEVDKVNK--PYLPLASGEISMGTGIAITLASALMSLAYAVMIRS 103
+LM +N ++D + D+ K P+ SG +S+ + + AL+S + +
Sbjct: 62 ILMRSAGCCVNDVADRDFDRHVKRTAQRPVTSGAVSVREALGVGAVLALVSFGLVLTTNA 121
Query: 104 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGR 163
A IAW A ++ P + P V + +G
Sbjct: 122 -----ATIAWSLPALAVTIAYPFAK-----------------RFVSMPQAVLGVAFSMGI 159
Query: 164 PLEIFTR-----PLMFATAFISCFCVVIAFIKD--LHDVDGDKKFGIKTLSVMLGKERV 215
P+ FT P++ A + C V+A+ + + D D D K G+KT ++ LG+ V
Sbjct: 160 PMA-FTAVGGAVPMLAAWLVLGNLCWVLAYDTEYAMVDRDDDLKIGMKTSAITLGRHDV 217
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 74/178 (41%), Gaps = 48/178 (26%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
++N + D+++D++NKP+ P+ S IS+ + +Y++M I+ +I
Sbjct: 56 SLNDIYDLKIDRINKPFRPIPSKRISL---------TDAKVFSYSIM------IFGLIIS 100
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
+F + F M LN ++ Q ++ + ++G L + +
Sbjct: 101 LFN------------------IYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSV 142
Query: 174 FATAFISCFCVVIAF---------------IKDLHDVDGDKKFGIKTLSVMLGKERVF 216
F I+ V ++ IKD D++GD K + +L + G++ ++
Sbjct: 143 FIFGGIAVGNVNVSLYLFSCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIY 200
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 34.7 bits (78), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 113
A+N + D+++D++NKP P+ S I++ + + +M L + + F+ AV+
Sbjct: 56 ALNDIYDLKIDRINKPKRPIPSKRITLNNAKVFSYSLVVMGL-FISLFNISCFLMAVLNS 114
Query: 114 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 173
I + S +K N + + L G V++ V + I ++
Sbjct: 115 IVLQQYAST------YKKNKIIGNLIVAYLTG-----SVFIFGGIAVGNIDVTI----ML 159
Query: 174 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 216
F A + + I IKD D++GD K + ++ + G+ ++
Sbjct: 160 FLCALFAMWSREI--IKDYEDIEGDLKEKVISIPIKCGERSIY 200
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 59/189 (31%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEI-------------SMGTGIAITLASALMSLA---- 96
AIN D+++D +N+P P+ SG + ++GT IA ++ S S+A
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGSIALFNS 128
Query: 97 -----YAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFP 151
YA ++ P + + G+ + + + G L+ +++
Sbjct: 129 LLLILYAKTLKGTPLLGNLSIGYLTGSVFLFGASIFGFGGIKALSVLFLLA--------- 179
Query: 152 VYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 211
L I R + +KD+ D++GD G TL + +G
Sbjct: 180 ------------ALAITAREI----------------VKDIEDMEGDSLEGADTLPLRIG 211
Query: 212 KERVFRLSV 220
++ L+V
Sbjct: 212 AKKAGYLAV 220
>sp|A1S066|DGGGP_THEPD Digeranylgeranylglyceryl phosphate synthase OS=Thermofilum pendens
(strain Hrk 5) GN=Tpen_1449 PE=3 SV=1
Length = 284
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 55 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 114
+N D+E D ++KP+ PL S IS G+ ++ +L LA ++ AV+A
Sbjct: 64 VNDYFDLESDAISKPWRPLPSRRISPGSAVSASLPLLAAGLALGFLVSPLCGFTAVLASA 123
Query: 115 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 174
+ YS ++ L GN +A F +++ L P E + L
Sbjct: 124 LL-FLYSWRVKALGLPGNVLIA-------------FLAALNVVYGALASP-EPWRSLLPS 168
Query: 175 ATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFR 217
A AF+ + +K + D++GD G+KT++ LG R
Sbjct: 169 AYAFLIILGREV--LKGVEDLEGDAARGVKTVASTLGARAALR 209
>sp|Q3IHW5|UBIA_PSEHT 4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=ubiA PE=3 SV=1
Length = 292
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 44/225 (19%)
Query: 23 PVQTLADLTPAYFT-GLMEALVPA-----------VLMHIYVVAINQLSDVEVDKVNKPY 70
P+ TL L P Y+ L A +P+ V+M IN +D ++D K
Sbjct: 23 PIGTLLLLWPTYWALWLANAGMPSLTNFIVFTLGVVIMRSAGCVINDFADRKIDGSVKRT 82
Query: 71 L--PLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLR 128
+ PL SG++S +G AI+L L+++A+ +++ SV LL
Sbjct: 83 MQRPLVSGQVS--SGEAISLFILLITVAFLLVLM-----------------LSVNTILLS 123
Query: 129 WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL----EIFTRPLMFATAFISCFCV 184
+ + AFC + TQ P V + P+ I P+ FI+ C
Sbjct: 124 F--GALALAFCYPFMKRY-TQLPQVVLGAAFGWAIPMAFMASINALPIQAWLLFIANICW 180
Query: 185 VIAF--IKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAY 227
+A+ + + D D D K G+K+ +++ GK R + +L++A+
Sbjct: 181 TVAYDTMYAMVDRDDDLKIGVKSTAILFGKYD--RHIIGLLNLAF 223
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 59/189 (31%)
Query: 54 AINQLSDVEVDKVNKPYLPLASGEI-------------SMGTGIA---------ITLASA 91
AIN D+++D +N+P P+ SG + + GT +A I L ++
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVQAKEALYFSYLLFAAGTLLAFSINSICGLIALFNS 128
Query: 92 LMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFP 151
L+ + YA ++ P + L + G+ FL + L GL T F
Sbjct: 129 LLLILYAKTLKGTPLLG--------------NLSIGYLTGSVFLFGASVFGLEGLKTLFV 174
Query: 152 VYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 211
+++ + R + +KD+ D++GD+ TL + +G
Sbjct: 175 LFLLAALAITAREI-----------------------VKDIEDMEGDRLEDADTLPLRIG 211
Query: 212 KERVFRLSV 220
++ L+V
Sbjct: 212 AKKAGYLAV 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.142 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,556,086
Number of Sequences: 539616
Number of extensions: 3676425
Number of successful extensions: 10955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 10847
Number of HSP's gapped (non-prelim): 96
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)