BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022645
(294 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
D ++ L I K +G+ ++R + VAVK++ ++ A+ +F
Sbjct: 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL----MEQDFHAERVNEFLR 83
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY-SLSTETVLRLA 183
EVA++ RL HPNIV F+ A +PP I+TEY+S+G+L L+K L L +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 184 LDISRGMEYLHSQG--VIHRDLKSXXXXXXDDMRVKVADFGTSCLE-TQCRETKGNMGTY 240
D+++GM YLH++ ++HRDLKS VKV DFG S L+ + +K GT
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTP 203
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEK 291
WMAPE+++++P K DVYSFG++LWEL T P+ + P Q AV K
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
D ++ L I K +G+ ++R + VAVK++ ++ A+ +F
Sbjct: 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL----MEQDFHAERVNEFLR 83
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY-SLSTETVLRLA 183
EVA++ RL HPNIV F+ A +PP I+TEY+S+G+L L+K L L +A
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 184 LDISRGMEYLHSQG--VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQC-RETKGNMGTY 240
D+++GM YLH++ ++HR+LKS VKV DFG S L+ +K GT
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEK 291
WMAPE+++++P K DVYSFG++LWEL T P+ + P Q AV K
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 8/220 (3%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEV 126
++W + + + + +K G + +Y G++K+ ++ V + + E ++F E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLKEA 58
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L +A I
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRWMA 244
S MEYL + IHRDL + ++ VKVADFG S L T T G +W A
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQ 283
PE + ++ K DV++FG++LWE+ T + P+ G+ P Q
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 8/220 (3%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEV 126
++W + + + + +K G +Y G++K+ ++ V + + E ++F E
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLKEA 58
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L +A I
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRWMA 244
S MEYL + IHRDL + ++ VKVADFG S L T T G +W A
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQ 283
PE + ++ K DV++FG++LWE+ T + P+ G+ P Q
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 8/220 (3%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEV 126
++W + + + + +K G + +Y G++K+ ++ V + + E ++F E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLKEA 58
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
A++ + HPN+VQ + C + P + II E+M+ G L YL + +S +L +A I
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 118
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRWMA 244
S MEYL + IHRDL + ++ VKVADFG S L T T G +W A
Sbjct: 119 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQ 283
PE + ++ K DV++FG++LWE+ T + P+ G+ P Q
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ 218
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 126/228 (55%), Gaps = 21/228 (9%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKL 118
++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------- 52
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E +
Sbjct: 53 -QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASET-KFEMKK 109
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKG 235
++ +A +RGM+YLH++ +IHRDLKS +D VK+ DFG + ++++ + +
Sbjct: 110 LIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ 169
Query: 236 NMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 27/232 (11%)
Query: 62 SKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAK 117
S++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 12 SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------ 64
Query: 118 LEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E +
Sbjct: 65 --QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASET-KFEMK 120
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM 237
++ +A +RGM+YLH++ +IHRDLKS +D VK+ DFG L T+ G+
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSH 177
Query: 238 ------GTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 117/221 (52%), Gaps = 8/221 (3%)
Query: 62 SKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQ 121
S + ++W + + + + +K G + +Y G++K+ ++ V + + E ++
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EE 60
Query: 122 FKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLR 181
F E A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGT 239
+A IS MEYL + IHRDL + ++ VKVADFG S L T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
+W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 8/221 (3%)
Query: 62 SKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQ 121
S + ++W + + + + +K G + +Y G++K+ ++ V + + E ++
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EE 60
Query: 122 FKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLR 181
F E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGT 239
+A IS MEYL + IHRDL + ++ VKVADFG S L T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
+W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 48 SMILDSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI 107
SM S N + WE+ + D + + +K G + +Y G++K+ ++ V + +
Sbjct: 2 SMDPSSPNYDKWEMERTD----------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 51
Query: 108 PNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLN 167
E ++F E A++ + HPN+VQ + C + P + IITE+M+ G L YL
Sbjct: 52 KEDTMEV-----EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR 106
Query: 168 KKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE 227
+ ++ +L +A IS MEYL + IHRDL + ++ VKVADFG S L
Sbjct: 107 ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 228 TQCRET--KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
T T G +W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 8/221 (3%)
Query: 62 SKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQ 121
S + ++W + + + + +K G + +Y G++K+ ++ V + + E ++
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EE 60
Query: 122 FKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLR 181
F E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGT 239
+A IS MEYL + IHRDL + ++ VKVADFG S L T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
+W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 60
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 60
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 71
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 229
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 59
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 60
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 27/232 (11%)
Query: 62 SKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAK 117
S++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 12 SRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------ 64
Query: 118 LEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
Q FK+EV +L + H NI+ F+ P + I+T++ +L +L+ E +
Sbjct: 65 --QAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASET-KFEMK 120
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM 237
++ +A +RGM+YLH++ +IHRDLKS +D VK+ DFG L T+ G+
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG---LATEKSRWSGSH 177
Query: 238 ------GTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + II E+M+ G L YL + +S +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + II E+M+ G L YL + +S +L +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 19/230 (8%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D ++L + G ++YR + VAVK R + +E ++ + + E L +
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAAR--HDPDEDISQTIENVRQEAKLFAM 62
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI+ C K P C++ E+ G L L+ K + + ++ A+ I+RGM
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMN 119
Query: 192 YLHSQGV---IHRDLKSXXXXXXDDMR--------VKVADFGTSCLETQCRETK-GNMGT 239
YLH + + IHRDLKS + +K+ DFG + R TK G
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA--REWHRTTKMSAAGA 177
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
Y WMAPE+I+ +++ DV+S+G++LWEL T +PF+G+ + A+ VA
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 18/235 (7%)
Query: 48 SMILDSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI 107
SM S N + WE+ + D + + +K G + +Y G++K+ ++ V + +
Sbjct: 2 SMDPSSPNYDKWEMERTD----------ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 51
Query: 108 PNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLN 167
E ++F E A++ + HPN+VQ + C + P + II E+M+ G L YL
Sbjct: 52 KEDTMEV-----EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR 106
Query: 168 KKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE 227
+ ++ +L +A IS MEYL + IHRDL + ++ VKVADFG S L
Sbjct: 107 ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 228 TQCRET--KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
T T G +W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 127/228 (55%), Gaps = 21/228 (9%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKL 118
++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------- 75
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E
Sbjct: 76 -QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIK 132
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKG 235
++ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + +
Sbjct: 133 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 236 NMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 127/228 (55%), Gaps = 21/228 (9%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKL 118
++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------- 76
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E
Sbjct: 77 -QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIK 133
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKG 235
++ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + +
Sbjct: 134 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 236 NMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 265
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + +S +L +A
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHR+L + ++ VKVADFG S L T T G +W
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 385
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 59
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + II E+M+ G L YL + ++ +L +A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHRDL + ++ VKVADFG S L T T G +W
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 21/227 (9%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLE 119
+ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL-------- 53
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKL 111
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGN 236
+ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 237 MGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 126/227 (55%), Gaps = 21/227 (9%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLE 119
+ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL-------- 53
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKL 111
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGN 236
+ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 237 MGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 125/224 (55%), Gaps = 21/224 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLEQQF 122
++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+ Q F
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL--------QAF 53
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
K+EV +L + H NI+ F+ KP + I+T++ +L +L+ E ++ +
Sbjct: 54 KNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 111
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGNMGT 239
A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + + G+
Sbjct: 112 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 240 YRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 125/224 (55%), Gaps = 21/224 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLEQQF 122
++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+ Q F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL--------QAF 51
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
K+EV +L + H NI+ F+ KP + I+T++ +L +L+ E ++ +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 109
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGNMGT 239
A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + + G+
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 240 YRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 262
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHR+L + ++ VKVADFG S L T T G +W
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 420
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 126/228 (55%), Gaps = 21/228 (9%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKL 118
++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------- 76
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E
Sbjct: 77 -QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIK 133
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKG 235
++ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + +++ + +
Sbjct: 134 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 236 NMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 116/218 (53%), Gaps = 8/218 (3%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EEFLK 304
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E A++ + HPN+VQ + C + P + IITE+M+ G L YL + ++ +L +A
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
IS MEYL + IHR+L + ++ VKVADFG S L T T G +W
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 462
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 126/228 (55%), Gaps = 21/228 (9%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKL 118
++ ++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL------- 68
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
Q FK+EV +L + H NI+ F+ KP + I+T++ +L +L+ E
Sbjct: 69 -QAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIK 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKG 235
++ +A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + +++ + +
Sbjct: 126 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 236 NMGTYRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
G+ WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFK 123
+ ++W + + + + +K G + +Y G++K+ ++ V + + E ++F
Sbjct: 22 QSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-----EEFL 76
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
E A++ + HPN+VQ + C P + I+TEYM G L YL + ++ +L +A
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMA 136
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYR 241
IS MEYL + IHRDL + ++ VKVADFG S L T T G +
Sbjct: 137 TQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
W APE + ++ K DV++FG++LWE+ T + P+ G+
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 124/224 (55%), Gaps = 21/224 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLEQQF 122
++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+ Q F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL--------QAF 51
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
K+EV +L + H NI+ F+ KP + I+T++ +L +L+ E ++ +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 109
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGNMGT 239
A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + +++ + + G+
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 240 YRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 124/224 (55%), Gaps = 21/224 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PNQIEETRAKLEQQF 122
++W Q+ +G + SG+ +Y+G + VAVKM+ + P Q+ Q F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQL--------QAF 51
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
K+EV +L + H NI+ F+ P + I+T++ +L +L+ E ++ +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIET-KFEMIKLIDI 109
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGNMGT 239
A ++GM+YLH++ +IHRDLKS +D+ VK+ DFG + ++++ + + G+
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 240 YRWMAPEMIK---EKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
WMAPE+I+ + PY+ + DVY+FGIVL+EL T LP+ +
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 12/214 (5%)
Query: 68 EWTADLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEV 126
+W D S+L + SG ++ G + + VA+K +R A E+ F E
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-------EGAMSEEDFIEEA 54
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
++ +L HP +VQ C + C++TE+M G L YL + + ET+L + LD+
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDV 113
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMA 244
GM YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 173
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
PE+ Y+ K DV+SFG+++WE+ + +P++
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 123/214 (57%), Gaps = 13/214 (6%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
W + S++ + + SG+ +Y+G + VAVK++++ + E Q F++EVA+
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQF----QAFRNEVAV 85
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
L + H NI+ F+ K + I+T++ +L +L+ +E ++ +A ++
Sbjct: 86 LRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQ 143
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ---CRETKGNMGTYRWMAP 245
GM+YLH++ +IHRD+KS + + VK+ DFG + ++++ ++ + G+ WMAP
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP 203
Query: 246 EMIK---EKPYTRKVDVYSFGIVLWELTTALLPF 276
E+I+ P++ + DVYS+GIVL+EL T LP+
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 13/203 (6%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
W ++ +L + G + G Y+ VAVK ++ Q F +E ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--------NDATAQAFLAEASV 67
Query: 129 LSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+++L H N+VQ + +K +Y I+TEYM++G+L YL + L + +L+ +LD+
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
MEYL +HRDL + +D KV+DFG + + ++T G + +W APE
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPE 184
Query: 247 MIKEKPYTRKVDVYSFGIVLWEL 269
++EK ++ K DV+SFGI+LWE+
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 13/203 (6%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
W ++ +L + G + G Y+ VAVK ++ Q F +E ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--------NDATAQAFLAEASV 52
Query: 129 LSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+++L H N+VQ + +K +Y I+TEYM++G+L YL + L + +L+ +LD+
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 111
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
MEYL +HRDL + +D KV+DFG + + ++T G + +W APE
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPE 169
Query: 247 MIKEKPYTRKVDVYSFGIVLWEL 269
++EK ++ K DV+SFGI+LWE+
Sbjct: 170 ALREKKFSTKSDVWSFGILLWEI 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 13/203 (6%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
W ++ +L + G + G Y+ VAVK ++ Q F +E ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--------NDATAQAFLAEASV 239
Query: 129 LSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+++L H N+VQ + +K +Y I+TEYM++G+L YL + L + +L+ +LD+
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 298
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
MEYL +HRDL + +D KV+DFG + + ++T G + +W APE
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPE 356
Query: 247 MIKEKPYTRKVDVYSFGIVLWEL 269
++EK ++ K DV+SFGI+LWE+
Sbjct: 357 ALREKKFSTKSDVWSFGILLWEI 379
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 68 EWTADLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEV 126
+W D S+L + SG ++ G + + VA+K +R A E+ F E
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-------EGAMSEEDFIEEA 56
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
++ +L HP +VQ C + C++ E+M G L YL + + ET+L + LD+
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDV 115
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMA 244
GM YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 175
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
PE+ Y+ K DV+SFG+++WE+ + +P++
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
W ++ +L + G + G Y+ VAVK ++ Q F +E ++
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--------NDATAQAFLAEASV 58
Query: 129 LSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+++L H N+VQ + +K +Y I+TEYM++G+L YL + L + +L+ +LD+
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
MEYL +HRDL + +D KV+DFG + + ++T G + +W APE
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GKL-PVKWTAPE 175
Query: 247 MIKEKPYTRKVDVYSFGIVLWEL 269
++E ++ K DV+SFGI+LWE+
Sbjct: 176 ALREAAFSTKSDVWSFGILLWEI 198
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D ++ + GA + + ++ + VA+K QIE + + F E+ LSR
Sbjct: 7 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIK------QIESESER--KAFIVELRQLSR 58
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET-VLRLALDISRGM 190
+ HPNIV+ AC P C++ EY G+L L+ EP T + L S+G+
Sbjct: 59 VNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 191 EYLHS---QGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLETQCRETKGNMGTYRWMAPE 246
YLHS + +IHRDLK V K+ DFGT+C + Q T N G+ WMAPE
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-DIQTHMTN-NKGSAAWMAPE 174
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + Y+ K DV+S+GI+LWE+ T PF
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D ++ + GA + + ++ + VA+K QIE + + F E+ LSR
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIK------QIESESER--KAFIVELRQLSR 57
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET-VLRLALDISRGM 190
+ HPNIV+ AC P C++ EY G+L L+ EP T + L S+G+
Sbjct: 58 VNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 191 EYLHS---QGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLETQCRETKGNMGTYRWMAPE 246
YLHS + +IHRDLK V K+ DFGT+C + Q T N G+ WMAPE
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-DIQTHMTN-NKGSAAWMAPE 173
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + Y+ K DV+S+GI+LWE+ T PF
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
D S+L + SG ++ G + + VA+K +R A E+ F E ++
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-------EGAMSEEDFIEEAEVMM 57
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+L HP +VQ C + C++ E+M G L YL + + ET+L + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 116
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMI 248
YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +PE+
Sbjct: 117 AYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 249 KEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
Y+ K DV+SFG+++WE+ + +P++
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 77
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL +EP YS
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 198 RDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 257 -PVEELFKL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
D S+L + SG ++ G + + VA+K +R A E+ F E ++
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-------EGAMSEEDFIEEAEVMM 57
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+L HP +VQ C + C++ E+M G L YL + + ET+L + LD+ GM
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 116
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMI 248
YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +PE+
Sbjct: 117 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 176
Query: 249 KEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
Y+ K DV+SFG+++WE+ + +P++
Sbjct: 177 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
D S+L + SG ++ G + + VA+K +R A E+ F E ++
Sbjct: 3 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-------EGAMSEEDFIEEAEVMM 55
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+L HP +VQ C + C++ E+M G L YL + + ET+L + LD+ GM
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 114
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMI 248
YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +PE+
Sbjct: 115 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 174
Query: 249 KEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
Y+ K DV+SFG+++WE+ + +P++
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 77
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL---- 174
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 175 ----------STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
S++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 198 RDIHHIDXXKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 257 -PVEELFKL 264
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 70
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P YS
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 191 RDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 250 -PVEELFKL 257
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 77
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P YS
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 198 RDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 257 -PVEELFKL 264
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 69
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P YS
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 190 RDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 249 -PVEELFKL 256
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 118
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P YS
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 239 RDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 298 -PVEELFKL 305
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 66
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS- 173
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P YS
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 174 ---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
LS++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 187 RDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 246 -PVEELFKL 253
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 6 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 58
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 59 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 175
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 174
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 7 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 59
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 60 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 176
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 174
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 13 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 65
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 66 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 182
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 63
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 180
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 14 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 66
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 67 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTY 240
I+ GM ++ + IHRDL++ D + K+ADFG + L E RE G
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE--GAKFPI 183
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+W APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 56
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL + + T+ +L + D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 115
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + ++G+ RW P
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPP 175
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAEKV 292
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+ +
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM ++ + IHRDL++ D + K+ADFG + L + + +G +W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 26/232 (11%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQR-----AVAVKMVRIPNQIEETRAKLEQQ 121
E+ D + L +G G + G KQ VAVK +++ N ++ ++E+
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS---SQREIEE- 82
Query: 122 FKSEVALLSRLFHPNIVQFIAAC-----KKPPVYCIITEYMSQGTLRMYLN----KKEPY 172
F SE A + HPN+++ + C + P +I +M G L YL + P
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142
Query: 173 SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS---CLETQ 229
+ +T+L+ +DI+ GMEYL ++ +HRDL + DDM V VADFG S
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 230 CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTP 281
R+ + +W+A E + ++ YT K DV++FG+ +WE+ T +GMTP
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT-----RGMTP 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 10 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 63 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM ++ + IHRDL++ D + K+ADFG + L + + +G +W
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 62
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL---- 174
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P L
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 175 ----------STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
S++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 183 RDIHHIDYYKKTTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 242 -PVEELFKL 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 36/249 (14%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYR----GIYKQRA-----VAVKMVRIPNQIEETRAKLE 119
W +L +G GA ++ G+ K + VAVKM++ + K
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-----SDATEKDL 77
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL---- 174
SE+ ++ + H NI+ + AC + +I EY S+G LR YL + P L
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 175 ----------STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
S++ ++ A ++RGMEYL S+ IHRDL + +D +K+ADFG +
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 225 ----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
++ + T G + +WMAPE + ++ YT + DV+SFG++LWE+ T P+ G+
Sbjct: 198 RDIHHIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 280 TPVQAAFAV 288
PV+ F +
Sbjct: 257 -PVEELFKL 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 11 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 63
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM ++ + IHRDL++ D + K+ADFG + L + + +G +W
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++EW L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 15 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 67
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 68 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM ++ + IHRDL++ D + K+ADFG + L + + +G +W
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 225
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKSE 125
+EW L + + +G ++ G Y VAVK ++ + + F +E
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAE 53
Query: 126 VALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRWM 243
I+ GM ++ + IHRDL++ D + K+ADFG + L + + +G +W
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 244 APEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQR-AVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
D S+L + SG ++ G + + VA+K ++ + E+ F E ++
Sbjct: 25 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-------DFIEEAEVMM 77
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+L HP +VQ C + C++ E+M G L YL + + ET+L + LD+ GM
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGM 136
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMI 248
YL VIHRDL + ++ +KV+DFG + L+ Q + G +W +PE+
Sbjct: 137 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 249 KEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
Y+ K DV+SFG+++WE+ + +P++
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 80 NKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
+ SG + G +K Q VAVKM++ + E+ +F E + +L HP +V
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-------EFFQEAQTMMKLSHPKLV 66
Query: 139 QFIAACKKP-PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
+F C K P+Y I+TEY+S G L YL + L +L + D+ GM +L S
Sbjct: 67 KFYGVCSKEYPIY-IVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
IHRDL + D+ VKV+DFG + L+ Q + G +W APE+ Y+
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 256 KVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAE 290
K DV++FGI++WE+ + +P+ T + V++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 12/226 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 55
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL + + T+ +L + D+
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 114
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + + G+ RW P
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 174
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAE 290
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 56
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL ++ + T+ +L + D+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVC 115
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + + G+ RW P
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 175
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAEKV 292
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+ +
Sbjct: 176 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 62
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL + + T+ +L + D+
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 121
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + + G+ RW P
Sbjct: 122 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 181
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAEKV 292
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+ +
Sbjct: 182 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 71
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL + + T+ +L + D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + + G+ RW P
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 190
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAEKV 292
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+ +
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + + +G ++ G Y VAVK ++ + + F +
Sbjct: 5 EDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLA 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET--KGNMGTYRW 242
I+ GM ++ + IHRDL++ D + K+ADFG + L T +G +W
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 111/239 (46%), Gaps = 33/239 (13%)
Query: 68 EWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
E+ D+ + G F + A + + VAVKM++ EE A ++ F+ E A
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTM--VAVKMLK-----EEASADMQADFQREAA 102
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-------------- 173
L++ +PNIV+ + C C++ EYM+ G L +L P++
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 174 --------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS- 224
LS L +A ++ GM YL + +HRDL + ++M VK+ADFG S
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 225 -CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMT 280
+ GN RWM PE I YT + DV+++G+VLWE+ + L P+ GM
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W D L + +G + G ++ Q VA+KM++ + E+ +F E
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-------EFIEEAK 71
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ L H +VQ C K IITEYM+ G L YL + + T+ +L + D+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVC 130
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
MEYL S+ +HRDL + D VKV+DFG S L+ + + G+ RW P
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPP 190
Query: 246 EMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGMTPVQAAFAVAEKV 292
E++ ++ K D+++FG+++WE+ + +P++ T + A +A+ +
Sbjct: 191 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEPYSLST--------------ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P + + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDXXKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 68 EWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKSEV 126
EW L + + +G ++ G Y VAVK ++ + + F +E
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEA 55
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L+ +L H +V+ A + P+Y IITEYM G+L +L L+ +L +A I
Sbjct: 56 NLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 114
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRWMA 244
+ GM ++ + IHR+L++ D + K+ADFG + L + + +G +W A
Sbjct: 115 AEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 174
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
PE I +T K DV+SFGI+L E+ T +P+ GMT
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFHPNI 137
+ G +++G + + VA+K + + + ET + Q+F+ EV ++S L HPNI
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 138 VQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
V+ PP ++ E++ G L L+K P S + LRL LDI+ G+EY+ +Q
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYMQNQ 141
Query: 197 G--VIHRDLKSXXXXXXD-----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI- 248
++HRDL+S + KVADFGTS + G +G ++WMAPE I
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--QQSVHSVSGLLGNFQWMAPETIG 199
Query: 249 -KEKPYTRKVDVYSFGIVLWELTTALLPF 276
+E+ YT K D YSF ++L+ + T PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ + EE + L SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-DDATEEDLSDL----VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 132/263 (50%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 59
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 60 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQC 230
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG T +
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 231 RETKGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
KG G RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 237
Query: 288 VAE 290
V E
Sbjct: 238 VME 240
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 68
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 69 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQC 230
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG T +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 231 RETKGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
KG G RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 246
Query: 288 VAE 290
V E
Sbjct: 247 VME 249
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKNTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +++ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMRIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM---VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
SGA +Y+GI+ VK+ ++I N+ +A +E F E +++ + HP++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEALIMASMDHPHLV 80
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + C P + ++T+ M G L Y+++ + ++ ++ +L + I++GM YL + +
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLEERRL 138
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMG--TYRWMAPEMIKEKPYTR 255
+HRDL + VK+ DFG + LE +E + G +WMA E I + +T
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 198
Query: 256 KVDVYSFGIVLWELTT-ALLPFQGM 279
+ DV+S+G+ +WEL T P+ G+
Sbjct: 199 QSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 64
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRET 233
+ ++++A +I+ GM YL+++ +HRDL + D VK+ DFG T +
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 234 KGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 234
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G G ++ GI K + VAVKM+
Sbjct: 10 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 67
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 68 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 122
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 123 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 182
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 183 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 242 WEIFTLGGSPYPGI-PVEELFKL 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 91 YRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVY 150
+RG Y VA+KM++ + E+ +F E ++ L H +VQ C K
Sbjct: 25 WRGQYD---VAIKMIKEGSMSED-------EFIEEAKVMMNLSHEKLVQLYGVCTKQRPI 74
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
IITEYM+ G L YL + + T+ +L + D+ MEYL S+ +HRDL +
Sbjct: 75 FIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV 133
Query: 211 XDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
D VKV+DFG S L+ + + G+ RW PE++ ++ K D+++FG+++WE
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 269 L-TTALLPFQGMTPVQAAFAVAE 290
+ + +P++ T + A +A+
Sbjct: 194 IYSLGKMPYERFTNSETAEHIAQ 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G G ++ GI K + VAVKM+
Sbjct: 5 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 62
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 63 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 117
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 118 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV 177
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 178 TENNVMKIADFGLARDINNIDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 237 WEIFTLGGSPYPGI-PVEELFKL 258
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G G ++ GI K + VAVKM+
Sbjct: 7 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 64
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 65 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 119
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 120 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 179
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 180 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 239 WEIFTLGGSPYPGI-PVEELFKL 260
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 67
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRET 233
+ ++++A +I+ GM YL+++ +HRDL + D VK+ DFG T +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 234 KGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 67
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRET 233
+ ++++A +I+ GM YL+++ +HRDL + D VK+ DFG T +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 234 KGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 65
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 66 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 230 C-RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
R+ + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 243
Query: 288 VAE 290
V E
Sbjct: 244 VME 246
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM---VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
SGA +Y+GI+ VK+ ++I N+ +A +E F E +++ + HP++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEALIMASMDHPHLV 103
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + C P + ++T+ M G L Y+++ + ++ ++ +L + I++GM YL + +
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLEERRL 161
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMG--TYRWMAPEMIKEKPYTR 255
+HRDL + VK+ DFG + LE +E + G +WMA E I + +T
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH 221
Query: 256 KVDVYSFGIVLWELTT-ALLPFQGM 279
+ DV+S+G+ +WEL T P+ G+
Sbjct: 222 QSDVWSYGVTIWELMTFGGKPYDGI 246
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G G ++ GI K + VAVKM+
Sbjct: 64 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 121
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I EY S+G LR
Sbjct: 122 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 176
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 177 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 236
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 237 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 295
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 296 WEIFTLGGSPYPGI-PVEELFKL 317
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 67
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 68 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 230 C-RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
R+ + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 245
Query: 288 VAE 290
V E
Sbjct: 246 VME 248
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 67
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 68 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 230 C-RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
R+ + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 245
Query: 288 VAE 290
V E
Sbjct: 246 VME 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 134/264 (50%), Gaps = 40/264 (15%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAAC-KKPPVYCIITEYMSQGTLR 163
+ ++ K SE+ ++ + H NI+ + AC + P+Y I+ Y S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVA-YASKGNLR 129
Query: 164 MYLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 189
Query: 210 XXDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIV 265
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG++
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 266 LWEL-TTALLPFQGMTPVQAAFAV 288
+WE+ T P+ G+ PV+ F +
Sbjct: 249 MWEIFTLGGSPYPGI-PVEELFKL 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 68
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 69 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 230 CRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
G + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 246
Query: 288 VAE 290
V E
Sbjct: 247 VME 249
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 61
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 62 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 230 C-RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
R+ + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 239
Query: 288 VAE 290
V E
Sbjct: 240 VME 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 64
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
F +E +++ ++V+ + + +I E M++G L+ YL P +++ V
Sbjct: 65 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP-AMANNPV 121
Query: 180 L---------RLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLET 228
L ++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 229 QCRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAF 286
G + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 241
Query: 287 AVAE 290
V E
Sbjct: 242 FVME 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFHPNI 137
+ G +++G + + VA+K + + + ET + Q+F+ EV ++S L HPNI
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 138 VQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
V+ PP ++ E++ G L L+K P S + LRL LDI+ G+EY+ +Q
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYMQNQ 141
Query: 197 G--VIHRDLKSXXXXXXD-----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI- 248
++HRDL+S + KVADFG S + G +G ++WMAPE I
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--QQSVHSVSGLLGNFQWMAPETIG 199
Query: 249 -KEKPYTRKVDVYSFGIVLWELTTALLPF 276
+E+ YT K D YSF ++L+ + T PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 38/263 (14%)
Query: 55 NVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQR-----AVAVKMV 105
V +E+ ++ + E+ D +L +G GA ++ GI K + VAVKM+
Sbjct: 18 GVSEYELPEDPKWEFPRD--KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 106 RIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
+ ++ K SE+ ++ + H NI+ + AC + +I Y S+G LR
Sbjct: 76 K-----DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLRE 130
Query: 165 YLNKKEP----YS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
YL + P YS ++ + ++ ++RGMEYL SQ IHRDL +
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 211 XDDMRVKVADFG----TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
++ +K+ADFG + ++ + T G + +WMAPE + ++ YT + DV+SFG+++
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 267 WEL-TTALLPFQGMTPVQAAFAV 288
WE+ T P+ G+ PV+ F +
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL 271
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 96
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 97 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 230 CRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
G + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 274
Query: 288 VAE 290
V E
Sbjct: 275 VME 277
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 61
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 62 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 230 C-RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
R+ + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 239
Query: 288 VAE 290
V E
Sbjct: 240 VME 242
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 74
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
F +E +++ ++V+ + + +I E M++G L+ YL P +++ V
Sbjct: 75 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP-AMANNPV 131
Query: 180 L---------RLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLET 228
L ++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 229 QCRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAF 286
G + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
Query: 287 AVAE 290
V E
Sbjct: 252 FVME 255
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 24/243 (9%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK-------QRAVAVKMVRIPNQIEETRAKLE 119
+EW ++ + + G+ +Y G+ K + VA+K V N+ R ++E
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIE 74
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-------- 171
F +E +++ ++V+ + + +I E M++G L+ YL P
Sbjct: 75 --FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQ 229
S ++++A +I+ GM YL++ +HRDL + +D VK+ DFG + ET
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 230 CRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFA 287
G + RWM+PE +K+ +T DV+SFG+VLWE+ T A P+QG++ Q
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252
Query: 288 VAE 290
V E
Sbjct: 253 VME 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 18/230 (7%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 67
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRET 233
+ ++++A +I+ GM YL+++ +HRDL + D VK+ DFG T +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 234 KGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 31/240 (12%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP----YS 173
SE+ ++S L H NIV + AC +ITEY G L +L +K P YS
Sbjct: 98 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYS 152
Query: 174 ----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT 223
LS+ +L + +++GM +L S+ IHRD+ + + K+ DFG
Sbjct: 153 YNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 212
Query: 224 S--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ + KGN +WMAPE I + YT + DV+S+GI+LWE+ + L P+ G+
Sbjct: 213 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 272
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFK 123
+++W + L +G + G ++ G + VAVK R E L+ +F
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFL 160
Query: 124 SEVALLSRLFHPNIVQFIAAC-KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
E +L + HPNIV+ I C +K P+Y I+ E + G +L + E L +T+L++
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFL-RTEGARLRVKTLLQM 218
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ-CRETKGNMG--T 239
D + GMEYL S+ IHRDL + + +K++DFG S E G +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
+W APE + Y+ + DV+SFGI+LWE
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 67
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRE 232
+ ++++A +I+ GM YL+++ +HRDL + D VK+ DFG + ET
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 233 TKGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 188 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFK 123
+++W + L +G + G ++ G + VAVK R E L+ +F
Sbjct: 106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-----ETLPPDLKAKFL 160
Query: 124 SEVALLSRLFHPNIVQFIAAC-KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
E +L + HPNIV+ I C +K P+Y I+ E + G +L + E L +T+L++
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFL-RTEGARLRVKTLLQM 218
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ-CRETKGNMG--T 239
D + GMEYL S+ IHRDL + + +K++DFG S E G +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
+W APE + Y+ + DV+SFGI+LWE
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 74 SQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF 133
S L G G + + +++ + M + EET ++ F EV ++ L
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEET----QRTFLKEVKVMRCLE 65
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMY---LNKKEPYSLSTETVLRLALDISRGM 190
HPN+++FI K ITEY+ GTLR ++ + P+S A DI+ GM
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS----FAKDIASGM 121
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQ---CRETKGN------- 236
YLHS +IHRDL S ++ V VADFG + L +TQ R K
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 237 -MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
+G WMAPEMI + Y KVDV+SFGIVL E+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 29/238 (12%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK------EP 171
SE+ ++S L H NIV + AC +ITEY G L +L +K +P
Sbjct: 98 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 172 Y------SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS- 224
+LST +L + +++GM +L S+ IHRD+ + + K+ DFG +
Sbjct: 153 AFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 225 -CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ KGN +WMAPE I + YT + DV+S+GI+LWE+ + L P+ G+
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
GNK G +Y+G VAVK ++ ++ T +L+QQF E+ ++++ H N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVK--KLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 139 QFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ + C++ YM G+L R+ P LS ++A + G+ +LH
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHEN 152
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN---MGTYRWMAPEMIKEKPY 253
IHRD+KS + K++DFG + + +T +GT +MAPE ++ +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE-I 211
Query: 254 TRKVDVYSFGIVLWELTTAL 273
T K D+YSFG+VL E+ T L
Sbjct: 212 TPKSDIYSFGVVLLEIITGL 231
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
GNK G +Y+G VAVK ++ ++ T +L+QQF E+ ++++ H N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVK--KLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 139 QFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ + C++ YM G+L R+ P LS ++A + G+ +LH
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHEN 152
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN---MGTYRWMAPEMIKEKPY 253
IHRD+KS + K++DFG + + +T +GT +MAPE ++ +
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE-I 211
Query: 254 TRKVDVYSFGIVLWELTTAL 273
T K D+YSFG+VL E+ T L
Sbjct: 212 TPKSDIYSFGVVLLEIITGL 231
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
Query: 71 ADLSQLFIG-NKFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
AD +LF K G+ +++GI Q+ VA+K++ + E + + E+
Sbjct: 18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEIT 72
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
+LS+ P + ++ + K II EY+ G+ L+ EP L + + +I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREIL 129
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAP 245
+G++YLHS+ IHRD+K+ + VK+ADFG + +TQ + +GT WMAP
Sbjct: 130 KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAP 188
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
E+IK+ Y K D++S GI EL P + P++ F + +
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ N E F
Sbjct: 177 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-------FLQ 229
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 230 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 288
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG L + + +G +W
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 22/228 (9%)
Query: 57 ETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETR 115
+ WE+ +E L + + +G ++ G + VA+K ++ E+
Sbjct: 2 DVWEIPRES----------LQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES- 50
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
F E ++ +L H +VQ A + P+Y I+TEYM++G+L +L E +L
Sbjct: 51 ------FLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALK 103
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRET 233
++ +A ++ GM Y+ IHRDL+S + + K+ADFG + L + +
Sbjct: 104 LPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTAR 163
Query: 234 KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+G +W APE +T K DV+SFGI+L EL T +P+ GM
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 9/213 (4%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
I +K G S +Y VA+K + IP + +E K +F+ EV S+L H
Sbjct: 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK---RFEREVHNSSQLSHQ 71
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NIV I ++ Y ++ EY+ TL Y+ P LS +T + I G+++ H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILDGIKHAHD 129
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMIKEKPY 253
++HRD+K + +K+ DFG + ET +T +GT ++ +PE K +
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 254 TRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
D+YS GIVL+E+ PF G T V A
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 30 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 89
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ ++S L H NIV + AC +ITEY G L +L +K L E
Sbjct: 90 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 144
Query: 178 T--------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLE 227
+L + +++GM +L S+ IHRD+ + + K+ DFG + +
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 204
Query: 228 TQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KGN +WMAPE I + YT + DV+S+GI+LWE+ + L P+ G+
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 258
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ ++S L H NIV + AC +ITEY G L +L +K L E
Sbjct: 98 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKE 152
Query: 178 T--------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLE 227
+L + +++GM +L S+ IHRD+ + + K+ DFG + +
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 212
Query: 228 TQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KGN +WMAPE I + YT + DV+S+GI+LWE+ + L P+ G+
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 266
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFHPNI 137
+ G +++G + + VA+K + + + ET + Q+F+ EV ++S L HPNI
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 138 VQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
V+ PP ++ E++ G L L+K P S + LRL LDI+ G+EY+ +Q
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALGIEYMQNQ 141
Query: 197 G--VIHRDLKSXXXXXXD-----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI- 248
++HRDL+S + KVADF S + G +G ++WMAPE I
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--QQSVHSVSGLLGNFQWMAPETIG 199
Query: 249 -KEKPYTRKVDVYSFGIVLWELTTALLPF 276
+E+ YT K D YSF ++L+ + T PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 67
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRE 232
+ ++++A +I+ GM YL+++ +HR+L + D VK+ DFG + ET
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 233 TKGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 188 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQF 122
+EW ++ + + G+ +Y G I K A V+ N+ R ++E F
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--F 68
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST------ 176
+E +++ ++V+ + K ++ E M+ G L+ YL P + +
Sbjct: 69 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 177 --ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRE 232
+ ++++A +I+ GM YL+++ +HR+L + D VK+ DFG + ET
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 188
Query: 233 TKGNMG--TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
KG G RWMAPE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 189 -KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 238
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 19/227 (8%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D QL K +++G ++ + VK++++ + + + F E L
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKV----RDWSTRKSRDFNEECPRLRI 63
Query: 132 LFHPNIVQFIAACKKPPVY--CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
HPN++ + AC+ PP +IT +M G+L L++ + + ++ ALD++RG
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARG 123
Query: 190 MEYLHS-QGVIHRD-LKSXXXXXXDDM--RVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
M +LH+ + +I R L S +DM R+ +AD S ++ G M W+AP
Sbjct: 124 MAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYAPAWVAP 177
Query: 246 EMIKEKP---YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
E +++KP R D++SF ++LWEL T +PF ++ ++ VA
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA 224
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 12/223 (5%)
Query: 72 DLSQLFIG-NKFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
D +LF K G+ +++GI Q+ VA+K++ + E + + E+ +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITV 58
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
LS+ P + ++ + K II EY+ G+ L+ EP L + + +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREILK 115
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEM 247
G++YLHS+ IHRD+K+ + VK+ADFG + T + + +GT WMAPE+
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 175
Query: 248 IKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
IK+ Y K D++S GI EL P + P++ F + +
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 119 EQQFKSEVALLSRL-FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-----EPY 172
+ F E+ +L +L HPNI+ + AC+ + EY G L +L K +P
Sbjct: 59 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 118
Query: 173 ---------SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT 223
+LS++ +L A D++RGM+YL + IHRDL + ++ K+ADFG
Sbjct: 119 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 178
Query: 224 S-CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
S E ++T G + RWMA E + YT DV+S+G++LWE+ + P+ GMT
Sbjct: 179 SRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 70 TADLSQLFIG-NKFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEV 126
+ D +LF K G+ +++GI Q+ VA+K++ + E + + E+
Sbjct: 22 SMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEI 76
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+LS+ P + ++ + K II EY+ G+ L+ EP L + + +I
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREI 133
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAP 245
+G++YLHS+ IHRD+K+ + VK+ADFG + T + + +GT WMAP
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 193
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
E+IK+ Y K D++S GI EL P + P++ F + +
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 119 EQQFKSEVALLSRL-FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-----EPY 172
+ F E+ +L +L HPNI+ + AC+ + EY G L +L K +P
Sbjct: 69 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 128
Query: 173 ---------SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT 223
+LS++ +L A D++RGM+YL + IHRDL + ++ K+ADFG
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 188
Query: 224 S-CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
S E ++T G + RWMA E + YT DV+S+G++LWE+ + P+ GMT
Sbjct: 189 SRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 29/238 (12%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 38 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 97
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK------EP 171
SE+ ++S L H NIV + AC +ITEY G L +L +K +P
Sbjct: 98 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 172 Y------SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS- 224
+ ST +L + +++GM +L S+ IHRD+ + + K+ DFG +
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 225 -CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ KGN +WMAPE I + YT + DV+S+GI+LWE+ + L P+ G+
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 72 DLSQLFIG-NKFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
D +LF K G+ +++GI Q+ VA+K++ + E + + E+ +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-----EEAEDEIEDIQQEITV 58
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
LS+ P + ++ + K II EY+ G+ L+ EP L + + +I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREILK 115
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPE 246
G++YLHS+ IHRD+K+ + VK+ADFG + +TQ + +GT WMAPE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAPE 174
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
+IK+ Y K D++S GI EL P + P++ F + +
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 218
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFK 123
D++ W + + + +G ++ G Y VAVK ++ P + Q F
Sbjct: 4 DKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSV------QAFL 56
Query: 124 SEVALLSRLFHPNIVQFIAAC-KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
E L+ L H +V+ A ++ P+Y IITEYM++G+L +L E + ++
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIY-IITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTY 240
+ I+ GM Y+ + IHRDL++ + + K+ADFG + + + + +G
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAE 290
+W APE I +T K DV+SFGI+L+E+ T +P+ G T A+++
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 9/200 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
GNK G +Y+G VAVK ++ ++ T +L+QQF E+ ++++ H N+V
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVK--KLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 139 QFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ + C++ YM G+L R+ P LS ++A + G+ +LH
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIAQGAANGINFLHEN 146
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLE---TQCRETKGNMGTYRWMAPEMIKEKPY 253
IHRD+KS + K++DFG + Q +GT +MAPE ++ +
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE-I 205
Query: 254 TRKVDVYSFGIVLWELTTAL 273
T K D+YSFG+VL E+ T L
Sbjct: 206 TPKSDIYSFGVVLLEIITGL 225
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 228
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 228
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 3 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 55
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 213
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 19/224 (8%)
Query: 57 ETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRA 116
E++ V D EE T + F+ G ++Y+G+ + A R P +
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFL---IGHGVFGKVYKGVLRDGAKVALKRRTPES-----S 76
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKE--PYSL 174
+ ++F++E+ LS HP++V I C + +I +YM G L+ +L + S+
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET- 233
S E L + + +RG+ YLH++ +IHRD+KS ++ K+ DFG S T+ +T
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196
Query: 234 -----KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTA 272
KG +G ++ PE + T K DVYSFG+VL+E+ A
Sbjct: 197 LXXVVKGTLG---YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 19/224 (8%)
Query: 57 ETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRA 116
E++ V D EE T + F+ G ++Y+G+ + A R P +
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFL---IGHGVFGKVYKGVLRDGAKVALKRRTPES-----S 76
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKE--PYSL 174
+ ++F++E+ LS HP++V I C + +I +YM G L+ +L + S+
Sbjct: 77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET- 233
S E L + + +RG+ YLH++ +IHRD+KS ++ K+ DFG S T+ +T
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTH 196
Query: 234 -----KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTA 272
KG +G ++ PE + T K DVYSFG+VL+E+ A
Sbjct: 197 LXXVVKGTLG---YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 311
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W L + K G ++ G + VA+K ++ P + + F E
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQEAQ 54
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A I+
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRWMAP 245
GM Y+ +HRDL++ +++ KVADFG + L + + +G +W AP
Sbjct: 114 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
E +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 74 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 131
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 190
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
+ ++ +F R+ ++ VA+K +++ E+ R + F E +++ +
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV-GYTEKQR----RDFLGEASIMGQF 80
Query: 133 FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEY 192
HPNI+ K I+TEYM G+L +L KK + ++ + IS GM+Y
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 193 LHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMI 248
L G +HRDL + ++ KV+DFG S LE T+G RW APE I
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 249 KEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAE 290
+ +T DV+S+GIV+WE+ + P+ MT AV E
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEE 242
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +ITE+ G L YL K
Sbjct: 69 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 277 QGM 279
G+
Sbjct: 243 PGV 245
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 79 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 136
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 195
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGV 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 30/239 (12%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYK---QRAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPL-MVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 PYS------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG +
Sbjct: 132 PYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 225 --CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 11/239 (4%)
Query: 45 ESWSMILDSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM 104
+ ++ I+D E+ T +++ + ++ +G G +++GIY
Sbjct: 365 DDYAEIIDEEDTYTMPSTRD----YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMA 420
Query: 105 VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
V I T + ++F E + + HP+IV+ I + PV+ II E + G LR
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 479
Query: 165 YLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
+L ++ +SL +++ A +S + YL S+ +HRD+ + + VK+ DFG S
Sbjct: 480 FLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Query: 225 CL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE-LTTALLPFQGM 279
T + +KG + +WMAPE I + +T DV+ FG+ +WE L + PFQG+
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 81 KFASGAHSRIYRG----IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
+ G+ +Y G I K A V+ N+ R ++E F +E +++ +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHH 80
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST--------ETVLRLALDISR 188
+V+ + K ++ E M+ G L+ YL P + + + ++++A +I+
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMG--TYRWMA 244
GM YL+++ +HRDL + D VK+ DFG + ET KG G RWMA
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMA 199
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
PE +K+ +T D++SFG+VLWE+T+ A P+QG++
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 236
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 18/179 (10%)
Query: 119 EQQFKSEVALLSRL-FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-----EPY 172
+ F E+ +L +L HPNI+ + AC+ + EY G L +L K +P
Sbjct: 66 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 125
Query: 173 ---------SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT 223
+LS++ +L A D++RGM+YL + IHR+L + ++ K+ADFG
Sbjct: 126 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGL 185
Query: 224 S-CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
S E ++T G + RWMA E + YT DV+S+G++LWE+ + P+ GMT
Sbjct: 186 SRGQEVYVKKTMGRLPV-RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 243
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 102 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 159
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 218
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGV 244
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 75
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 76 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 133
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 192
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGV 218
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 43 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 98 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 156
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 157 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 71 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 128
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 187
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGV 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 74 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 131
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 190
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ +SL +++ A +S + YL S+
Sbjct: 74 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR 131
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINFRRFT 190
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ YSL +++ A +S + YL S+
Sbjct: 77 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKR 134
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 193
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGV 219
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ ++ H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL + +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +ITE+ G L YL K
Sbjct: 69 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 277 QGM 279
G+
Sbjct: 243 PGV 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIY-KQRAVAVKMVRIPNQIEETRAKLEQQFK 123
+++ W L + K +G ++ Y K VAVK ++ P + + F
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSV------EAFL 58
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+E ++ L H +V+ A K P+Y IITE+M++G+L +L E ++ +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYR 241
I+ GM ++ + IHRDL++ + K+ADFG + + + + +G +
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
W APE I +T K DV+SFGI+L E+ T +P+ GM+
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 217
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 60 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 114
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 115 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 173
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 174 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 32/241 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYK---QRAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 79
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 80 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 133
Query: 171 PYS--------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG 222
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG
Sbjct: 134 PYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 223 TS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQG 278
+ + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 279 M 279
+
Sbjct: 254 V 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 70 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 124
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 125 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 183
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 184 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +ITE+ G L YL K
Sbjct: 69 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFV 122
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 277 QGM 279
G+
Sbjct: 243 PGV 245
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEV 126
+EW QL IG G ++Y G + VA++++ I E+ + FK EV
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQL----KAFKREV 80
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
+ H N+V F+ AC PP IIT + +G + + L ++A +I
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITS-LCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG----TSCLETQCRETKGNM--GTY 240
+GM YLH++G++H+DLKS D+ +V + DFG + L+ RE K + G
Sbjct: 140 VKGMGYLHAKGILHKDLKS-KNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 241 RWMAPEMIKE---------KPYTRKVDVYSFGIVLWELTTALLPFQ-------------G 278
+APE+I++ P+++ DV++ G + +EL PF+ G
Sbjct: 199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258
Query: 279 MTPVQAAFAVAEKVS 293
M P + + +++S
Sbjct: 259 MKPNLSQIGMGKEIS 273
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
+ +AVA+K ++ ++ L ++F+ E L +RL HPN+V + K +I
Sbjct: 55 QTQAVAIKTLK-----DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109
Query: 156 YMSQGTLRMYLNKKEPYS--------------LSTETVLRLALDISRGMEYLHSQGVIHR 201
Y S G L +L + P+S L + L I+ GMEYL S V+H+
Sbjct: 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 169
Query: 202 DLKSXXXXXXDDMRVKVADFGT--SCLETQCRETKGN-MGTYRWMAPEMIKEKPYTRKVD 258
DL + D + VK++D G + GN + RWMAPE I ++ D
Sbjct: 170 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 229
Query: 259 VYSFGIVLWEL-TTALLPFQGMT 280
++S+G+VLWE+ + L P+ G +
Sbjct: 230 IWSYGVVLWEVFSYGLQPYCGYS 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
+ +AVA+K ++ ++ L ++F+ E L +RL HPN+V + K +I
Sbjct: 38 QTQAVAIKTLK-----DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 92
Query: 156 YMSQGTLRMYLNKKEPYS--------------LSTETVLRLALDISRGMEYLHSQGVIHR 201
Y S G L +L + P+S L + L I+ GMEYL S V+H+
Sbjct: 93 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 152
Query: 202 DLKSXXXXXXDDMRVKVADFGT--SCLETQCRETKGN-MGTYRWMAPEMIKEKPYTRKVD 258
DL + D + VK++D G + GN + RWMAPE I ++ D
Sbjct: 153 DLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD 212
Query: 259 VYSFGIVLWEL-TTALLPFQGMT 280
++S+G+VLWE+ + L P+ G +
Sbjct: 213 IWSYGVVLWEVFSYGLQPYCGYS 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 228
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+ EYMS+G+L +L + L ++ +A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 287
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 30/239 (12%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYK---QRAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 PYS------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG +
Sbjct: 132 PYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA 191
Query: 225 --CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIY-KQRAVAVKMVRIPNQIEETRAKLEQQFK 123
+++ W L + K +G ++ Y K VAVK ++ P + + F
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSV------EAFL 231
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+E ++ L H +V+ A K P+Y IITE+M++G+L +L E ++ +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYR 241
I+ GM ++ + IHRDL++ + K+ADFG + + + + +G +
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
W APE I +T K DV+SFGI+L E+ T +P+ GM+
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 51/262 (19%)
Query: 59 WEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQI 111
WE +E+ E G SGA ++ GI K VAVKM++
Sbjct: 40 WEFPRENLE----------FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK----- 84
Query: 112 EETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACK-KPPVYCIITEYMSQGTLRMYL-NK 168
E+ + + SE+ ++++L H NIV + AC P+Y +I EY G L YL +K
Sbjct: 85 EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIY-LIFEYCCYGDLLNYLRSK 143
Query: 169 KEPYS--------------------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXX 208
+E +S L+ E +L A +++GME+L + +HRDL +
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 203
Query: 209 XXXDDMRVKVADFGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIV 265
VK+ DFG + + +GN +WMAPE + E YT K DV+S+GI+
Sbjct: 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 263
Query: 266 LWEL-TTALLPFQGMTPVQAAF 286
LWE+ + + P+ G+ PV A F
Sbjct: 264 LWEIFSLGVNPYPGI-PVDANF 284
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+ EYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
I + GA ++Y+ K+ +V I + EE + + E+ +L+ HPNI
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL----EDYMVEIDILASCDHPNI 96
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLR-MYLNKKEPYSLS-TETVLRLALDISRGMEYLHS 195
V+ + A I+ E+ + G + + L + P + S + V + LD + YLH
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHD 153
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEMI-----K 249
+IHRDLK+ D +K+ADFG S T+ + + + +GT WMAPE++ K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
++PY K DV+S GI L E+ P + P++ +A+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ E F
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-------FLQ 59
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYM++G+L +L + L ++ ++
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 37/263 (14%)
Query: 48 SMILDSENV---ETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ--- 97
S+++D + + E E D +W +L +G GA ++ GI K
Sbjct: 35 SIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATC 94
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIIT 154
R VAVKM++ E RA + SE+ +L + H N+V + AC KP P+ +I
Sbjct: 95 RTVAVKMLKEGATHSEHRALM-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIV 148
Query: 155 EYMSQGTLRMYLNKKE----PYS----------LSTETVLRLALDISRGMEYLHSQGVIH 200
E+ G L YL K PY L+ E ++ + +++GME+L S+ IH
Sbjct: 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 208
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKV 257
RDL + + VK+ DFG + + KG+ +WMAPE I ++ YT +
Sbjct: 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 268
Query: 258 DVYSFGIVLWEL-TTALLPFQGM 279
DV+SFG++LWE+ + P+ G+
Sbjct: 269 DVWSFGVLLWEIFSLGASPYPGV 291
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ E F
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-------FLQ 59
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+TEYM++G+L +L + L ++ ++
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 33/242 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 19 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 78
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 79 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 132
Query: 171 PYS---------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF 221
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ DF
Sbjct: 133 PYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 222 GTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
G + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 278 GM 279
G+
Sbjct: 253 GV 254
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ E F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-------FLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+ EYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+ EYMS+G+L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 14/224 (6%)
Query: 72 DLSQLFIG-NKFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
D +LF ++ G+ +Y+GI + + VA+K++ + E + + E+ +
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL-----EEAEDEIEDIQQEITV 70
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
LS+ P I ++ + K II EY+ G+ L+ +P L + + +I +
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA---LDLLKPGPLEETYIATILREILK 127
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPE 246
G++YLHS+ IHRD+K+ + VK+ADFG + +TQ + +GT WMAPE
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-FVGTPFWMAPE 186
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
+IK+ Y K D++S GI EL P + P++ F + +
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG + LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 115/239 (48%), Gaps = 11/239 (4%)
Query: 45 ESWSMILDSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM 104
+ ++ I+D E+ T +++ + ++ +G G +++GIY
Sbjct: 365 DDYAEIIDEEDTYTMPSTRD----YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMA 420
Query: 105 VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
V I T + ++F E + + HP+IV+ I + PV+ II E + G LR
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRS 479
Query: 165 YLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
+L ++ +SL +++ A +S + YL S+ +HRD+ + VK+ DFG S
Sbjct: 480 FLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Query: 225 CL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE-LTTALLPFQGM 279
T + +KG + +WMAPE I + +T DV+ FG+ +WE L + PFQG+
Sbjct: 539 RYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 69 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 122
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
Query: 277 QGM 279
G+
Sbjct: 243 PGV 245
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
I + GA ++Y+ K+ +V I + EE + + E+ +L+ HPNI
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL----EDYMVEIDILASCDHPNI 96
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLR-MYLNKKEPYSLS-TETVLRLALDISRGMEYLHS 195
V+ + A I+ E+ + G + + L + P + S + V + LD + YLH
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHD 153
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEMI-----K 249
+IHRDLK+ D +K+ADFG S T+ + + + +GT WMAPE++ K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
++PY K DV+S GI L E+ P + P++ +A+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 22/228 (9%)
Query: 57 ETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETR 115
+ WE+ +E L + K G ++ G + VA+K ++ P +
Sbjct: 1 DAWEIPRES----------LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP-- 47
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
+ F E ++ +L H +VQ A + P+ I+TEYMS+G+L +L + L
Sbjct: 48 ----EAFLQEAQVMKKLRHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLR 102
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRET 233
++ +A I+ GM Y+ +HRDL++ +++ KVADFG + L + +
Sbjct: 103 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR 162
Query: 234 KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
+G +W APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 163 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
YM G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 YMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 277 QGM 279
G+
Sbjct: 252 PGV 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 277 QGM 279
G+
Sbjct: 252 PGV 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 38/247 (15%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRAV---AVKMVRIPNQIEETRAKL 118
E+W + L G +GA ++ G+ K+ AV AVKM++ +E A +
Sbjct: 23 NEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALM 82
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-------- 169
SE+ ++S L H NIV + AC +ITEY G L +L +K
Sbjct: 83 -----SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPS 137
Query: 170 -----EPYSLSTET--------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV 216
+P L E +L + +++GM +L S+ IHRD+ + +
Sbjct: 138 LAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 197
Query: 217 KVADFGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTA 272
K+ DFG + + KGN +WMAPE I + YT + DV+S+GI+LWE+ +
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 273 LLPFQGM 279
L P+ G+
Sbjct: 258 LNPYPGI 264
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 18/214 (8%)
Query: 76 LFIGNKFASGAHSRIYRG-IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFH 134
+ + + GA +++ Y KM+ +++ + F+ E LL+ L H
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS--------------LSTETVL 180
+IV+F C ++ EYM G L +L P + L +L
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGN-M 237
+A I+ GM YL SQ +HRDL + ++ VK+ DFG S T G+ M
Sbjct: 137 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 238 GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
RWM PE I + +T + DV+SFG++LWE+ T
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 36/254 (14%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQR-----AVAVKMVRI----PNQIEE 113
KE E+ Q +G G + KQ VAVKM++ + IEE
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 114 TRAKLEQQFKSEVALLSRLFHPNIVQFIA------ACKKPPVYCIITEYMSQGTLRMYL- 166
F E A + HP++ + + A + P+ +I +M G L +L
Sbjct: 72 --------FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL 123
Query: 167 ---NKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT 223
+ P++L +T++R +DI+ GMEYL S+ IHRDL + +DM V VADFG
Sbjct: 124 ASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGL 183
Query: 224 S---CLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
S R+ + +W+A E + + YT DV++FG+ +WE+ T +G T
Sbjct: 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-----RGQT 238
Query: 281 PVQAAFAVAEKVSY 294
P A AE +Y
Sbjct: 239 PY-AGIENAEIYNY 251
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKS 124
++ W L + K G ++ G + VA+K ++ P + + F
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSP------EAFLQ 62
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E ++ +L H +VQ A + P+Y I+ EYMS+G L +L + L ++ +A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRW 242
I+ GM Y+ +HRDL++ +++ KVADFG + L + + +G +W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE +T K DV+SFGI+L ELTT +P+ GM
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 220
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 131
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 277 QGM 279
G+
Sbjct: 252 PGV 254
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
I + GA ++Y+ K+ +V I + EE + + E+ +L+ HPNI
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL----EDYMVEIDILASCDHPNI 96
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLR-MYLNKKEPYSLS-TETVLRLALDISRGMEYLHS 195
V+ + A I+ E+ + G + + L + P + S + V + LD + YLH
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHD 153
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEMI-----K 249
+IHRDLK+ D +K+ADFG S T+ + + +GT WMAPE++ K
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
++PY K DV+S GI L E+ P + P++ +A+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 254
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 34/243 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 79
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKKE---- 170
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 80 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFV 133
Query: 171 PYS----------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVAD 220
PY L+ E ++ + +++GME+L S+ IHRDL + + VK+ D
Sbjct: 134 PYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 193
Query: 221 FGTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
FG + + KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
Query: 277 QGM 279
G+
Sbjct: 254 PGV 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGIY-KQRAVAVKMVRIPNQIEETRAKLEQQFK 123
+++ W L + K +G ++ Y K VAVK ++ P + + F
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSV------EAFL 225
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+E ++ L H +V+ A K P+Y IITE+M++G+L +L E ++ +
Sbjct: 226 AEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWM 243
I+ GM ++ + IHRDL++ + K+ADFG + + G +W
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV--------GAKFPIKWT 336
Query: 244 APEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
APE I +T K DV+SFGI+L E+ T +P+ GM+
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 374
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+G G +++GIY V I T + ++F E + + HP+I
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V+ I + PV+ II E + G LR +L ++ +SL +++ A +S + YL S+
Sbjct: 74 VKLIGVITENPVW-IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR 131
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+HRD+ + VK+ DFG S T + +KG + +WMAPE I + +T
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFT 190
Query: 255 RKVDVYSFGIVLWE-LTTALLPFQGM 279
DV+ FG+ +WE L + PFQG+
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----------- 168
+ F E LL+ L H +IV+F C + ++ EYM G L +L
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CL 226
P L+ +L +A I+ GM YL SQ +HRDL + +++ VK+ DFG S
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 227 ETQCRETKGN-MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
T G+ M RWM PE I + +T + DV+S G+VLWE+ T
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
+ ++ +F R+ K+ +VA+K +++ E+ R + F E +++ +
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQF 103
Query: 133 FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEY 192
HPNI++ K I+TE M G+L +L K + + ++ + I+ GM+Y
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 193 LHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMI 248
L G +HRDL + ++ KV+DFG S LE T+G RW +PE I
Sbjct: 163 LSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 249 KEKPYTRKVDVYSFGIVLWELTT 271
+ +T DV+S+GIVLWE+ +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
K + F SE +++ + HPNI+ K IITEYM G+L +L K + +
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTV 130
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRE 232
++ + I GM+YL +HRDL + ++ KV+DFG S LE
Sbjct: 131 IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 233 TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
T+G RW APE I + +T DV+S+GIV+WE+ +
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
+ ++ +F R+ K+ +VA+K +++ E+ R + F E +++ +
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQF 74
Query: 133 FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEY 192
HPNI++ K I+TE M G+L +L K + + ++ + I+ GM+Y
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKY 133
Query: 193 LHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMI 248
L G +HRDL + ++ KV+DFG S LE T+G RW +PE I
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 249 KEKPYTRKVDVYSFGIVLWELTT 271
+ +T DV+S+GIVLWE+ +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 13/227 (5%)
Query: 69 WTADLSQLFIGNKFASGAHSRIYRGIYKQRA-VAVKMVRIPNQIEETRAKLEQQFKSEVA 127
W + + K +G ++ G Y VAVK ++ P + Q F E
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSV------QAFLEEAN 59
Query: 128 LLSRLFHPNIVQFIAAC-KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L+ L H +V+ A K+ P+Y IITE+M++G+L +L E + ++ + I
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIY-IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI 118
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL--ETQCRETKGNMGTYRWMA 244
+ GM Y+ + IHRDL++ + + K+ADFG + + + + +G +W A
Sbjct: 119 AEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAE 290
PE I +T K +V+SFGI+L+E+ T +P+ G T A+++
Sbjct: 179 PEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQ----FKSEVALLSRLFHPNI 137
+G +Y+G+ K + + +P I+ +A ++ F E ++ + H NI
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKE---VPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
++ K IITEYM G L +L +K+ S ++ + I+ GM+YL +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRET---KGNMGTYRWMAPEMIKEKPY 253
+HRDL + ++ KV+DFG S LE T G RW APE I + +
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 254 TRKVDVYSFGIVLWELTT 271
T DV+SFGIV+WE+ T
Sbjct: 228 TSASDVWSFGIVMWEVMT 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 40/251 (15%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGI---YKQRA----VAVKMVRIPNQIEETRAK 117
+ +W L +G G ++ + K RA VAVKM++ E R
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL 73
Query: 118 LEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL----------- 166
L SE +L ++ HP++++ AC + +I EY G+LR +L
Sbjct: 74 L-----SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 167 -----------NKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
+ + +L+ ++ A IS+GM+YL ++HRDL + + +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK 188
Query: 216 VKVADFGTSC----LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+K++DFG S ++ + ++G + +WMA E + + YT + DV+SFG++LWE+ T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 -ALLPFQGMTP 281
P+ G+ P
Sbjct: 248 LGGNPYPGIPP 258
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 96 KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITE 155
K+ +VA+K +++ E+ R + F E +++ + HPNI++ K I+TE
Sbjct: 72 KEISVAIKTLKV-GYTEKQR----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
M G+L +L K + + ++ + I+ GM+YL G +HRDL + ++
Sbjct: 127 XMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV 185
Query: 216 VKVADFGTS-CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
KV+DFG S LE T+G RW +PE I + +T DV+S+GIVLWE+ +
Sbjct: 186 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
K + F SE +++ + HPNI+ K IITEYM G+L +L K + +
Sbjct: 57 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTV 115
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRE 232
++ + I GM+YL +HRDL + ++ KV+DFG S LE
Sbjct: 116 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 233 TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
T+G RW APE I + +T DV+S+GIV+WE+ +
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
K + F SE +++ + HPNI+ K IITEYM G+L +L K + +
Sbjct: 51 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTV 109
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRE 232
++ + I GM+YL +HRDL + ++ KV+DFG S LE
Sbjct: 110 IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 233 TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
T+G RW APE I + +T DV+S+GIV+WE+ +
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 40/251 (15%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGI---YKQRA----VAVKMVRIPNQIEETRAK 117
+ +W L +G G ++ + K RA VAVKM++ E R
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL 73
Query: 118 LEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL----------- 166
L SE +L ++ HP++++ AC + +I EY G+LR +L
Sbjct: 74 L-----SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 167 -----------NKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
+ + +L+ ++ A IS+GM+YL ++HRDL + + +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 216 VKVADFGTSC----LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+K++DFG S ++ + ++G + +WMA E + + YT + DV+SFG++LWE+ T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 -ALLPFQGMTP 281
P+ G+ P
Sbjct: 248 LGGNPYPGIPP 258
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V ++ ++ E++ G L + ++ E + +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIATVC 147
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + R + YLH+QGVIHRD+KS D R+K++DFG + + + + K +GT W
Sbjct: 148 LSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYW 207
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P+QA
Sbjct: 208 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
GNK G +Y+G VAVK ++ ++ T +L+QQF E+ + ++ H N+V
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVK--KLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 139 QFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ + C++ Y G+L R+ P LS ++A + G+ +LH
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-PLSWHXRCKIAQGAANGINFLHEN 143
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLE---TQCRETKGNMGTYRWMAPEMIKEKPY 253
IHRD+KS + K++DFG + Q +GT + APE ++ +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE-I 202
Query: 254 TRKVDVYSFGIVLWELTTAL 273
T K D+YSFG+VL E+ T L
Sbjct: 203 TPKSDIYSFGVVLLEIITGL 222
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 40/251 (15%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYRGI---YKQRA----VAVKMVRIPNQIEETRAK 117
+ +W L +G G ++ + K RA VAVKM++ E R
Sbjct: 14 EDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDL 73
Query: 118 LEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL----------- 166
L SE +L ++ HP++++ AC + +I EY G+LR +L
Sbjct: 74 L-----SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 167 -----------NKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
+ + +L+ ++ A IS+GM+YL ++HRDL + + +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 216 VKVADFGTSC----LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+K++DFG S ++ + ++G + +WMA E + + YT + DV+SFG++LWE+ T
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 -ALLPFQGMTP 281
P+ G+ P
Sbjct: 248 LGGNPYPGIPP 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 65
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG SC R T + GT ++ PEMI+ +
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-GTLDYLPPEMIEGR 182
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 8/216 (3%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKS 124
+ +WT L IG G +Y +Q + + V Q+E +A +E Q +
Sbjct: 6 KRQWT--LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE--KAGVEHQLRR 61
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV + S L HPNI++ +I EY GT+ L K + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYIT 119
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
+++ + Y HS+ VIHRD+K + +K+ADFG S R T GT ++
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT-LCGTLDYLP 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
PEMI+ + + KVD++S G++ +E + PF+ T
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 134
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 194
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 195 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 146
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 206
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 207 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 165
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 225
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 226 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 259
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 237
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 241
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 241
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 237
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 236
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 237
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 150
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 210
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 211 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 241
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 74 SQLFIGNKFASGAHSRIYRG---IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
S++ I SG + G + QR V V + + E + + F SE +++
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE---RQRRDFLSEASIMG 105
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+ HPNI++ + + I+TEYM G+L +L + + ++ + + GM
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGM 164
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRETKGNMGTYRWMAPE 246
YL G +HRDL + ++ KV+DFG S LE T G RW APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 247 MIKEKPYTRKVDVYSFGIVLWE-LTTALLPFQGMT 280
I + ++ DV+SFG+V+WE L P+ MT
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 116/233 (49%), Gaps = 13/233 (5%)
Query: 60 EVSKEDQEEWTADLSQLF-IGNKFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRA 116
++ K D++ T ++F + K G++ +Y+ I+K+ + VA+K V + + +
Sbjct: 14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL----- 68
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
Q+ E++++ + P++V++ + K I+ EY G++ + + +L+
Sbjct: 69 ---QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTE 124
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN 236
+ + + +G+EYLH IHRD+K+ + K+ADFG + T +
Sbjct: 125 DEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX 184
Query: 237 -MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
+GT WMAPE+I+E Y D++S GI E+ P+ + P++A F +
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 32/241 (13%)
Query: 59 WEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIY---KQRAVAVKMVRIPNQIEETR 115
W ++++D E Q IG SGA + + + Y K+ VA+K + +E+ +
Sbjct: 10 WSINRDDYE------LQEVIG----SGA-TAVVQAAYCAPKKEKVAIKRI----NLEKCQ 54
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGT----LRMYLNKKEP 171
+++ K E+ +S+ HPNIV + + ++ + +S G+ ++ + K E
Sbjct: 55 TSMDELLK-EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 113
Query: 172 YS--LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE-- 227
S L T+ + ++ G+EYLH G IHRD+K+ +D V++ADFG S
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 228 ----TQCRETKGNMGTYRWMAPEMIKE-KPYTRKVDVYSFGIVLWELTTALLPFQGMTPV 282
T+ + K +GT WMAPE++++ + Y K D++SFGI EL T P+ P+
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 233
Query: 283 Q 283
+
Sbjct: 234 K 234
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 103 KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL 162
KM+ ++E Q F+ E LL+ L H +IV+F C + ++ EYM G L
Sbjct: 48 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 107
Query: 163 RMYLNKKEPYS-------------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
+L P + L +L +A ++ GM YL +HRDL +
Sbjct: 108 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 167
Query: 210 XXDDMRVKVADFGTS--CLETQCRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
+ VK+ DFG S T G M RWM PE I + +T + DV+SFG+VL
Sbjct: 168 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 227
Query: 267 WELTT 271
WE+ T
Sbjct: 228 WEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 103 KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL 162
KM+ ++E Q F+ E LL+ L H +IV+F C + ++ EYM G L
Sbjct: 42 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 101
Query: 163 RMYLNKKEPYS-------------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
+L P + L +L +A ++ GM YL +HRDL +
Sbjct: 102 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 161
Query: 210 XXDDMRVKVADFGTS--CLETQCRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
+ VK+ DFG S T G M RWM PE I + +T + DV+SFG+VL
Sbjct: 162 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 221
Query: 267 WELTT 271
WE+ T
Sbjct: 222 WEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 103 KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL 162
KM+ ++E Q F+ E LL+ L H +IV+F C + ++ EYM G L
Sbjct: 71 KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
Query: 163 RMYLNKKEPYS-------------LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
+L P + L +L +A ++ GM YL +HRDL +
Sbjct: 131 NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL 190
Query: 210 XXDDMRVKVADFGTS--CLETQCRETKG-NMGTYRWMAPEMIKEKPYTRKVDVYSFGIVL 266
+ VK+ DFG S T G M RWM PE I + +T + DV+SFG+VL
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVL 250
Query: 267 WELTT 271
WE+ T
Sbjct: 251 WEIFT 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I+ GM YL + ++H
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 197
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 198 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
F H + K+ AVK + I E QF +E ++ HPN++ +
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLSLL 98
Query: 142 AACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 99 GICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEKPY 253
+HRDL + + VKVADFG + L+ + G +WMA E ++ + +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 254 TRKVDVYSFGIVLWELTTALLP 275
T K DV+SFG++LWEL T P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 74 SQLFIGNKFASGAHSRIYRG---IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
S++ I SG + G + QR V V + + E + + F SE +++
Sbjct: 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE---RQRRDFLSEASIMG 105
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
+ HPNI++ + + I+TEYM G+L +L + + ++ + + GM
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGM 164
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQ---CRETKGNMGTYRWMAPE 246
YL G +HRDL + ++ KV+DFG S LE T G RW APE
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 247 MIKEKPYTRKVDVYSFGIVLWE-LTTALLPFQGMT 280
I + ++ DV+SFG+V+WE L P+ MT
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 85 GAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAAC 144
G ++Y+ K+ +V I + EE + + E+ +L+ HPNIV+ + A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEEL----EDYMVEIDILASCDHPNIVKLLDAF 76
Query: 145 KKPPVYCIITEYMSQGTLR-MYLNKKEPYSLS-TETVLRLALDISRGMEYLHSQGVIHRD 202
I+ E+ + G + + L + P + S + V + LD + YLH +IHRD
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRD 133
Query: 203 LKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN--MGTYRWMAPEMI-----KEKPYTR 255
LK+ D +K+ADFG S T+ + + +GT WMAPE++ K++PY
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 256 KVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
K DV+S GI L E+ P + P++ +A+
Sbjct: 194 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 32/241 (13%)
Query: 59 WEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIY---KQRAVAVKMVRIPNQIEETR 115
W ++++D E Q IG SGA + + + Y K+ VA+K + +E+ +
Sbjct: 5 WSINRDDYE------LQEVIG----SGA-TAVVQAAYCAPKKEKVAIKRI----NLEKCQ 49
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGT----LRMYLNKKEP 171
+++ K E+ +S+ HPNIV + + ++ + +S G+ ++ + K E
Sbjct: 50 TSMDELLK-EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEH 108
Query: 172 YS--LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE-- 227
S L T+ + ++ G+EYLH G IHRD+K+ +D V++ADFG S
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 228 ----TQCRETKGNMGTYRWMAPEMIKE-KPYTRKVDVYSFGIVLWELTTALLPFQGMTPV 282
T+ + K +GT WMAPE++++ + Y K D++SFGI EL T P+ P+
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM 228
Query: 283 Q 283
+
Sbjct: 229 K 229
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +IT+ M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 235 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 110 QIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK 169
I +K ++ + EVA+L+ + HPNIVQ+ + ++ I+ +Y G L +N +
Sbjct: 58 NISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQ 117
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLET 228
+ + +L + I ++++H + ++HRD+KS D V++ DFG + L +
Sbjct: 118 KGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
Query: 229 QCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ +GT +++PE+ + KPY K D+++ G VL+EL T F+
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
F H + K+ AVK + I E QF +E ++ HPN++ +
Sbjct: 42 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLSLL 96
Query: 142 AACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 97 GICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEKPY 253
+HRDL + + VKVADFG + + + G +WMA E ++ + +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 254 TRKVDVYSFGIVLWELTTALLP 275
T K DV+SFG++LWEL T P
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAP 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
Query: 71 ADLSQLFIG-NKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVA 127
AD +LF + G+ +++GI Q+ VA+K++ + E + + E+
Sbjct: 19 ADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL-----EEAEDEIEDIQQEIT 73
Query: 128 LLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDI 186
+LS+ + ++ + K II EY+ G+ + L + P+ T+L+ +I
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGPFDEFQIATMLK---EI 129
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAP 245
+G++YLHS+ IHRD+K+ + VK+ADFG + T + + +GT WMAP
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
E+I++ Y K D++S GI EL P M P++ F + +
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 234
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y KQR + + V Q+E +A +E Q + EV + S L HPN
Sbjct: 9 IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPN 66
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ +I EY GT+ L K + + +++ + Y HS+
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALSYCHSK 124
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R T GT ++ PEMI+ + + K
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEK 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMT 280
VD++S G++ +E PF+ T
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANT 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKS 124
+ +WT L IG G +Y +Q + + V Q+E +A +E Q +
Sbjct: 6 KRQWT--LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLE--KAGVEHQLRR 61
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV + S L HPNI++ +I EY GT+ L K + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYIT 119
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
+++ + Y HS+ VIHRD+K + +K+ADFG S R GT ++
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLP 178
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
PEMI+ + + KVD++S G++ +E + PF+ T
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 93
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 94 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 241
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 205 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 235
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 237
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 59 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 113
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 114 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 33 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 87
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 88 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 95
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 96 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 205 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 94
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 95 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 99 AVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMS 158
AVA+K +++ E+ R + F E +++ + HPN+V + I+ E+M
Sbjct: 73 AVAIKTLKV-GYTEKQR----RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFME 127
Query: 159 QGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKV 218
G L +L K + + ++ + I+ GM YL G +HRDL + ++ KV
Sbjct: 128 NGALDAFLRKHDG-QFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKV 186
Query: 219 ADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+DFG S + E T G RW APE I+ + +T DV+S+GIV+WE+ +
Sbjct: 187 SDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 92
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 93 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 90
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 91 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 85 GAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---HPNIVQ 139
GA+ +Y R + VA+K VR+PN E L EVALL RL HPN+V+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE----GLPISTVREVALLRRLEAFEHPNVVR 70
Query: 140 FIAACKKPPV-----YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
+ C ++ E++ Q LR YL+K P L ET+ L RG+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+ ++HRDLK VK+ADFG + + + + T + APE++ + Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYA 189
Query: 255 RKVDVYSFGIVLWEL 269
VD++S G + E+
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 95
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 96 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQIEETRAKL 118
+W ++L G +GA ++ G+ K A VAVKM++ + E A +
Sbjct: 31 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 90
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ +LS L H NIV + AC +ITEY G L +L +K + ++
Sbjct: 91 -----SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 145
Query: 178 T----------------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF 221
T +L + +++GM +L S+ IHRDL + K+ DF
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 205
Query: 222 GTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
G + KGN +WMAPE I YT + DV+S+GI LWEL + P+
Sbjct: 206 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 265
Query: 278 GMTPVQAAF 286
GM PV + F
Sbjct: 266 GM-PVDSKF 273
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA +Y+G++ VK+ V I E T K ++ E +++ + +P++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C V +I + M G L Y+ + + ++ ++ +L + I++GM YL + ++H
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTRKV 257
RDL + VK+ DFG + L E + +G +WMA E I + YT +
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 258 DVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAEK 291
DV+S+G+ +WEL T P+ G+ P ++ EK
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDGI-PASEISSILEK 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQIEETRAKL 118
+W ++L G +GA ++ G+ K A VAVKM++ + E A +
Sbjct: 15 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 74
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ +LS L H NIV + AC +ITEY G L +L +K + ++
Sbjct: 75 -----SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 178 T----------------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF 221
T +L + +++GM +L S+ IHRDL + K+ DF
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 189
Query: 222 GTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
G + KGN +WMAPE I YT + DV+S+GI LWEL + P+
Sbjct: 190 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249
Query: 278 GMTPVQAAF 286
GM PV + F
Sbjct: 250 GM-PVDSKF 257
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 60 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 114
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM+YL S+
Sbjct: 115 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQIEETRAKL 118
+W ++L G +GA ++ G+ K A VAVKM++ + E A +
Sbjct: 33 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 92
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ +LS L H NIV + AC +ITEY G L +L +K + ++
Sbjct: 93 -----SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 147
Query: 178 T----------------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF 221
T +L + +++GM +L S+ IHRDL + K+ DF
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 207
Query: 222 GTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
G + KGN +WMAPE I YT + DV+S+GI LWEL + P+
Sbjct: 208 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 267
Query: 278 GMTPVQAAF 286
GM PV + F
Sbjct: 268 GM-PVDSKF 275
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 85 GAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---HPNIVQ 139
GA+ +Y R + VA+K VR+PN E L EVALL RL HPN+V+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE----GLPISTVREVALLRRLEAFEHPNVVR 70
Query: 140 FIAACKKPPV-----YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
+ C ++ E++ Q LR YL+K P L ET+ L RG+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+ ++HRDLK VK+ADFG + + + + T + APE++ + Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYA 189
Query: 255 RKVDVYSFGIVLWEL 269
VD++S G + E+
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 122 FKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETV 179
+K E+ +L L+H +I+++ C+ + + EY+ G+LR YL + +S+ +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQL 136
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----K 234
L A I GM YLH+Q IHRDL + +D VK+ DFG + + E
Sbjct: 137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
G+ + W APE +KE + DV+SFG+ L+EL T
Sbjct: 197 GDSPVF-WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 55 NVETWEVSKEDQEE-----WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIP 108
N E SK+ EE W L IG G +Y KQ + + V
Sbjct: 3 NPEEELASKQKNEESKKRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 109 NQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK 168
Q+E +A +E Q + EV + S L HPNI++ +I EY GT+ L K
Sbjct: 61 AQLE--KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 118
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
+ + +++ + Y HS+ VIHRD+K +K+ADFG S
Sbjct: 119 LSKFD--EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 176
Query: 229 QCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
R T GT ++ PEMI+ + + KVD++S G++ +E PF+ T
Sbjct: 177 SSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 227
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQIEETRAKL 118
+W ++L G +GA ++ G+ K A VAVKM++ + E A +
Sbjct: 38 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM 97
Query: 119 EQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTE 177
SE+ +LS L H NIV + AC +ITEY G L +L +K + ++
Sbjct: 98 -----SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 178 T----------------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF 221
T +L + +++GM +L S+ IHRDL + K+ DF
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 212
Query: 222 GTS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQ 277
G + KGN +WMAPE I YT + DV+S+GI LWEL + P+
Sbjct: 213 GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 272
Query: 278 GMTPVQAAF 286
GM PV + F
Sbjct: 273 GM-PVDSKF 280
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYR----GIYKQRA---VAVKMVRIPNQIEETRAKLE 119
+W ++L G +GA ++ G+ K A VAVKM++ + E A +
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALM- 97
Query: 120 QQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTET 178
SE+ +LS L H NIV + AC +ITEY G L +L +K + ++T
Sbjct: 98 ----SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 179 ----------------VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG 222
+L + +++GM +L S+ IHRDL + K+ DFG
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 213
Query: 223 TS--CLETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQG 278
+ KGN +WMAPE I YT + DV+S+GI LWEL + P+ G
Sbjct: 214 LARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
Query: 279 MTPVQAAF 286
M PV + F
Sbjct: 274 M-PVDSKF 280
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
F H + K+ AVK + I E QF +E ++ HPN++ +
Sbjct: 44 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLSLL 98
Query: 142 AACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 99 GICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEKPY 253
+HRDL + + VKVADFG + + + G +WMA E ++ + +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 254 TRKVDVYSFGIVLWELTTALLP 275
T K DV+SFG++LWEL T P
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
F H + K+ AVK + I E QF +E ++ HPN++ +
Sbjct: 43 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLSLL 97
Query: 142 AACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 98 GICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEKPY 253
+HRDL + + VKVADFG + + + G +WMA E ++ + +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 254 TRKVDVYSFGIVLWELTTALLP 275
T K DV+SFG++LWEL T P
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
F H + K+ AVK + I E QF +E ++ HPN++ +
Sbjct: 41 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLSLL 95
Query: 142 AACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 96 GICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEKPY 253
+HRDL + + VKVADFG + + + G +WMA E ++ + +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 254 TRKVDVYSFGIVLWELTTALLP 275
T K DV+SFG++LWEL T P
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAP 234
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
++ D+++ G ++++L L PF+
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 85 GAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---HPNIVQ 139
GA+ +Y R + VA+K VR+PN L EVALL RL HPN+V+
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGG-GGLPISTVREVALLRRLEAFEHPNVVR 78
Query: 140 FIAACKKPPV-----YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
+ C ++ E++ Q LR YL+K P L ET+ L RG+++LH
Sbjct: 79 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 137
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+ ++HRDLK VK+ADFG + + + + T + APE++ + Y
Sbjct: 138 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYA 197
Query: 255 RKVDVYSFGIVLWEL 269
VD++S G + E+
Sbjct: 198 TPVDMWSVGCIFAEM 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 55 NVETWEVSKEDQEE-----WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIP 108
N E SK+ EE W L IG G +Y KQ + + V
Sbjct: 12 NPEEELASKQKNEESKKRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 109 NQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK 168
Q+E +A +E Q + EV + S L HPNI++ +I EY GT+ L K
Sbjct: 70 AQLE--KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
+ + +++ + Y HS+ VIHRD+K +K+ADFG S
Sbjct: 128 LSKFD--EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 229 QCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
R T GT ++ PEMI+ + + KVD++S G++ +E PF+ T
Sbjct: 186 SSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 95
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 96 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 85 GAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---HPNIVQ 139
GA+ +Y R + VA+K VR+PN E L EVALL RL HPN+V+
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVPNGEE----GLPISTVREVALLRRLEAFEHPNVVR 70
Query: 140 FIAACKKPPV-----YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
+ C ++ E++ Q LR YL+K P L ET+ L RG+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYT 254
+ ++HRDLK VK+ADFG + + + + T + APE++ + Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYA 189
Query: 255 RKVDVYSFGIVLWEL 269
VD++S G + E+
Sbjct: 190 TPVDMWSVGCIFAEM 204
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 154
Query: 140 FIAAC---KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 155 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 80 NKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
F H + K+ AVK + I E QF +E ++ HPN++
Sbjct: 46 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV-----SQFLTEGIIMKDFSHPNVLS 100
Query: 140 FIAACKKP---PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ C + P+ ++ YM G LR ++ + E ++ + + ++ L +++GM++L S+
Sbjct: 101 LLGICLRSEGSPL--VVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGT---YRWMAPEMIKEK 251
+HRDL + + VKVADFG + + + G +WMA E ++ +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 252 PYTRKVDVYSFGIVLWELTTALLP 275
+T K DV+SFG++LWEL T P
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T+ GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTE-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
K + F SE +++ + HPN++ K IITE+M G+L +L + + +
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTV 134
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETK- 234
++ + I+ GM+YL +HRDL + ++ KV+DFG S LE +
Sbjct: 135 IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 235 ----GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
G RW APE I+ + +T DV+S+GIV+WE+ + P+ MT
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 245
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 82 FASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
G + +Y G + Q +A+K +I E ++ Q E+AL L H NIVQ
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIK------EIPERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + + I E + G+L L K P + +T+ I G++YLH +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 199 IHRDLKSXXXXXXDDMRV-KVADFGTS---CLETQCRETKGNMGTYRWMAPEMIKEKP-- 252
+HRD+K V K++DFGTS C ET GT ++MAPE+I + P
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGPRG 201
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAA 285
Y + D++S G + E+ T PF + QAA
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 65
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 182
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 69
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 82 FASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
G + +Y G + Q +A+K +I E ++ Q E+AL L H NIVQ
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIK------EIPERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + + I E + G+L L K P + +T+ I G++YLH +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 199 IHRDLKSXXXXXXDDMRV-KVADFGTS---CLETQCRETKGNMGTYRWMAPEMIKEKP-- 252
+HRD+K V K++DFGTS C ET GT ++MAPE+I + P
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGPRG 187
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAA 285
Y + D++S G + E+ T PF + QAA
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 89
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 146
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 67
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 74
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 131
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 89
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 146
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 69
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I R VA+K++ ++ + L++ F+ EV ++ L HPNIV+ +
Sbjct: 29 AKVKLARHILTGREVAIKII---DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIE 84
Query: 146 KPPVYCIITEYMSQGTLRMYL------NKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
+I EY S G + YL +KE S + V ++Y H + ++
Sbjct: 85 TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV--------SAVQYCHQKRIV 136
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVD 258
HRDLK+ DM +K+ADFG S T + G + APE+ + K Y +VD
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 259 VYSFGIVLWELTTALLPFQG 278
V+S G++L+ L + LPF G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 90
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 147
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 90
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 147
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 90
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 147
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 68
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 126
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 185
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 67
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 124
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 97
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 154
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y KQ + + V Q+E +A +E Q + EV + S L HPN
Sbjct: 11 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPN 68
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ +I EY GT+ L K + + +++ + Y HS+
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALSYCHSK 126
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R T GT ++ PEMI+ + + K
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEK 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMT 280
VD++S G++ +E PF+ T
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANT 209
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 93
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 150
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 68
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 125
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 95
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 152
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFR 238
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y KQ + + V Q+E +A +E Q + EV + S L HPN
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSHLRHPN 72
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ +I EY GT+ L K + + +++ + Y HS+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALSYCHSK 130
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R T GT ++ PEMI+ + + K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEK 189
Query: 257 VDVYSFGIVLWELTTALLPFQGMT 280
VD++S G++ +E PF+ T
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 93
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 150
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 92
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 149
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQ 277
+ D+++ G ++++L L PF+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 69
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 126
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I R VA+K++ ++ + L++ F+ EV ++ L HPNIV+ +
Sbjct: 26 AKVKLARHILTGREVAIKII---DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIE 81
Query: 146 KPPVYCIITEYMSQGTLRMYL------NKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
+I EY S G + YL +KE S + V ++Y H + ++
Sbjct: 82 TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV--------SAVQYCHQKRIV 133
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVD 258
HRDLK+ DM +K+ADFG S T + G+ + APE+ + K Y +VD
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 259 VYSFGIVLWELTTALLPFQG 278
V+S G++L+ L + LPF G
Sbjct: 194 VWSLGVILYTLVSGSLPFDG 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R + R VAVK++ ++ + L++ F+ EV ++ L HPNIV+ +
Sbjct: 29 AKVKLARHVLTGREVAVKII---DKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIE 84
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 85 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLK 141
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G+ + APE+ + K Y +VDV+S G
Sbjct: 142 AENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 202 VILYTLVSGSLPFDG 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 70
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 127
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 73 LSQLFIGN-----KFASG--AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSE 125
++ L IGN G A ++ R I + VAVK++ ++ + + L++ F+ E
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFR-E 56
Query: 126 VALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL- 184
V ++ L HPNIV+ + ++ EY S G + YL + E R
Sbjct: 57 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGWMKEKEARAKFR 113
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
I ++Y H + ++HRDLK+ DM +K+ADFG S T + G+ + A
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 173
Query: 245 PEMIKEKPYTR-KVDVYSFGIVLWELTTALLPFQG 278
PE+ + K Y +VDV+S G++L+ L + LPF G
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 81 KFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
+ +G + R I++ VA+K R +E K +++ E+ ++ +L HPN+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCR-----QELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 139 ---------QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISR 188
Q +A P + EY G LR YLN+ E E +R L DIS
Sbjct: 77 SAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDD---MRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ YLH +IHRDLK + K+ D G + Q +GT +++AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTALLPF-QGMTPVQAAFAVAEK 291
E++++K YT VD +SFG + +E T PF PVQ V EK
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 24/227 (10%)
Query: 81 KFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
+ +G + R I++ VA+K R +E K +++ E+ ++ +L HPN+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCR-----QELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 139 ---------QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISR 188
Q +A P + EY G LR YLN+ E E +R L DIS
Sbjct: 76 SAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDD---MRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ YLH +IHRDLK + K+ D G + Q +GT +++AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTALLPF-QGMTPVQAAFAVAEK 291
E++++K YT VD +SFG + +E T PF PVQ V EK
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 239
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 14 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 67
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 126
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 127 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 185
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAVK++ ++ + + L++ F+ EV ++ L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDG 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 18 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 71
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 130
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 189
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 15 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 68
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 127
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 186
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 20 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 73
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 132
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 191
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 12/207 (5%)
Query: 78 IGNKFASGAHSR--IYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
G G+ S + R + R A+K++ + I+E + + E ++SRL HP
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHP 90
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYLH 194
V+ + Y G L Y+ K + ET R +I +EYLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAEIVSALEYLH 147
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGN--MGTYRWMAPEMIKEK 251
+G+IHRDLK +DM +++ DFGT+ L + ++ + N +GT ++++PE++ EK
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
+ D+++ G ++++L L PF+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 13 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 66
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 125
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 184
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 95 YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIIT 154
+ R VAVKM+ + Q R +L +EV ++ H N+V+ + ++
Sbjct: 68 HSGRQVAVKMMDLRKQ---QRREL---LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM 121
Query: 155 EYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDM 214
E++ G L +++ L+ E + + + + + YLH+QGVIHRD+KS D
Sbjct: 122 EFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178
Query: 215 RVKVADFG-TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
RVK++DFG + + + K +GT WMAPE+I Y +VD++S GI++ E+
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 274 LPFQGMTPVQA 284
P+ +PVQA
Sbjct: 239 PPYFSDSPVQA 249
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTE 177
+ F+ E+ +L L H NIV++ C + I EY+ G+LR YL K + +
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHI 121
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK--- 234
+L+ I +GMEYL ++ IHRDL + ++ RVK+ DFG + + Q +E
Sbjct: 122 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 235 --GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
G + W APE + E ++ DV+SFG+VL+EL T +
Sbjct: 182 EPGESPIF-WYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 46 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 99
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 158
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 217
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 32/207 (15%)
Query: 83 ASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SG ++++ ++ + +K V+ N+ E EV L++L H NIV +
Sbjct: 20 GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----------REVKALAKLDHVNIVHY 69
Query: 141 IAAC-----------------KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
C K I E+ +GTL ++ K+ L L L
Sbjct: 70 -NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
I++G++Y+HS+ +I+RDLK D +VK+ DFG + L+ + + + GT R+
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR-SKGTLRY 187
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWEL 269
M+PE I + Y ++VD+Y+ G++L EL
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 21 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 74
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 133
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 134 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 192
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 15 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 68
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 127
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 186
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 69
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY +G + L K + + +++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PEMI+ +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 19 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 72
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 131
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 132 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 190
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAVK++ ++ + + L++ F+ EV ++ L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G+ + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDG 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAVK++ ++ + + L++ F+ EV ++ L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G+ + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDG 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 100/232 (43%), Gaps = 13/232 (5%)
Query: 55 NVETWEVSKEDQEE-----WTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIP 108
N E SK+ EE W L IG G +Y KQ + + V
Sbjct: 12 NPEEELASKQKNEESKKRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 109 NQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK 168
Q+E +A +E Q + EV + S L HPNI++ +I EY GT+ L K
Sbjct: 70 AQLE--KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
+ + +++ + Y HS+ VIHRD+K +K+ADFG S
Sbjct: 128 LSKFD--EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 229 QCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
R GT ++ PEMI+ + + KVD++S G++ +E PF+ T
Sbjct: 186 SSRRDD-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 15 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 68
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL K + + +L+ I +GM
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGM 127
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE-----TKGNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF-WYAP 186
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTE 177
+ F+ E+ +L L H NIV++ C + I EY+ G+LR YL K + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHI 132
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK--- 234
+L+ I +GMEYL ++ IHRDL + ++ RVK+ DFG + + Q +E
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 235 --GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
G + W APE + E ++ DV+SFG+VL+EL T +
Sbjct: 193 EPGESPIF-WYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTE 177
+ F+ E+ +L L H NIV++ C + I EY+ G+LR YL K + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHI 132
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK--- 234
+L+ I +GMEYL ++ IHRDL + ++ RVK+ DFG + + Q +E
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 235 --GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
G + W APE + E ++ DV+SFG+VL+EL T +
Sbjct: 193 EPGESPIF-WYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 67
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGR 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKS 124
+ +W L IG G +Y KQ + + V Q+E +A +E Q +
Sbjct: 2 KRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRR 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV + S L HPNI++ +I EY GT+ L K + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
+++ + Y HS+ VIHRD+K +K+ADFG S R GT ++
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLP 174
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
PEMI+ + + KVD++S G++ +E PF+ T
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Query: 83 ASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL-FHPNIVQ 139
+G + ++Y+G + + A+K++ + EE + K E+ +L + H NI
Sbjct: 33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE-------EIKQEINMLKKYSHHRNIAT 85
Query: 140 FIAAC--KKPPV----YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
+ A K PP ++ E+ G++ + + +L E + + +I RG+ +L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMI--KE 250
H VIHRD+K ++ VK+ DFG S L+ +GT WMAPE+I E
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 251 KP---YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
P Y K D++S GI E+ P M P++A F +
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 53/257 (20%)
Query: 68 EWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSE-- 125
E + DL L + G + +Y+G +R VAVK+ N+ Q F +E
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR---------QNFINEKN 57
Query: 126 VALLSRLFHPNIVQFIAACKKPPV-----YCIITEYMSQGTLRMYLNKKEPYSLSTE--- 177
+ + + H NI +FI ++ Y ++ EY G+L YL SL T
Sbjct: 58 IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------SLHTSDWV 111
Query: 178 TVLRLALDISRGMEYLHSQ---------GVIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
+ RLA ++RG+ YLH++ + HRDL S +D ++DFG S T
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 229 QCRETK---------GNMGTYRWMAPEMIK-------EKPYTRKVDVYSFGIVLWEL--- 269
R + +GT R+MAPE+++ + ++VD+Y+ G++ WE+
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
Query: 270 TTALLPFQGMTPVQAAF 286
T L P + + Q AF
Sbjct: 232 CTDLFPGESVPEYQMAF 248
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 101 AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAA-----------CKKPPV 149
A+K +R+PN+ E R K+ + EV L++L HP IV++ A P V
Sbjct: 34 AIKRIRLPNR-ELAREKVMR----EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 150 YCII-TEYMSQGTLRMYLNKKEPYSLSTETV-LRLALDISRGMEYLHSQGVIHRDLKSXX 207
Y I + + L+ ++N + +V L + L I+ +E+LHS+G++HRDLK
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN 148
Query: 208 XXXXDDMRVKVADFGTSCLETQCRETK-------------GNMGTYRWMAPEMIKEKPYT 254
D VKV DFG Q E + G +GT +M+PE I Y+
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 255 RKVDVYSFGIVLWELTTALLPF 276
KVD++S G++L+EL L PF
Sbjct: 209 HKVDIFSLGLILFEL---LYPF 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP + + + EY++ G L ++ + LS T A +I G+++L
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFL 134
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM--GTYRWMAPEMIKEK 251
HS+G+++RDLK D +K+ADFG C E + K N GT ++APE++ +
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGM-CKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
Y VD +SFG++L+E+ PF G
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D QL K +++G ++ + VK++++ + + + F E L
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKV----RDWSTRKSRDFNEECPRLRI 63
Query: 132 LFHPNIVQFIAACKKPPVY--CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
HPN++ + AC+ PP +IT + G+L L++ + + ++ ALD +RG
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARG 123
Query: 190 MEYLHS-QGVIHRD-LKSXXXXXXDDM--RVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+LH+ + +I R L S +D R+ AD S ++ G W+AP
Sbjct: 124 XAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXYAPAWVAP 177
Query: 246 EMIKEKP---YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
E +++KP R D +SF ++LWEL T +PF ++ + VA
Sbjct: 178 EALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVA 224
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAV RI ++ + + L++ F+ EV ++ L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G+ + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDG 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 122 FKSEVALLSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
+K E+ +L L+H +I+++ C + ++ EY+ G+LR YL + +S+ +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE-----TK 234
L A I GM YLHSQ IHR+L + +D VK+ DFG + + E
Sbjct: 120 LLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
G+ + W APE +KE + DV+SFG+ L+EL T
Sbjct: 180 GDSPVF-WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 20/228 (8%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETR--------AKLEQQFKSEVALLS 130
K SGA+ + K A+K+++ +Q ++ R K ++ +E++LL
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIK-KSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLALDISRG 189
L HPNI++ + + ++TE+ G L +N+ + +++ L G
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL---SG 158
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDD---MRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
+ YLH ++HRD+K + + +K+ DFG S ++ + + +GT ++APE
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE 218
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
++K+K Y K DV+S G++++ L PF G Q EK Y
Sbjct: 219 VLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQND-QDIIKKVEKGKY 264
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 66
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+A+FG S R T GT ++ PEMI+ +
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 183
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP + + + EY++ G L ++ + LS T A +I G+++L
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFL 135
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN--MGTYRWMAPEMIKEK 251
HS+G+++RDLK D +K+ADFG C E + K N GT ++APE++ +
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGM-CKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
Y VD +SFG++L+E+ PF G
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 69
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R T GT ++ PE I+ +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEXIEGR 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 66
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPEMIEGR 183
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAV RI ++ + + L++ F+ EV ++ L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ DM +K+ADFG S T + G+ + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQG 278
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDG 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTE 177
+ F+ E+ +L L H NIV++ C + I E++ G+LR YL K + +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-RIDHI 117
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK--- 234
+L+ I +GMEYL ++ IHRDL + ++ RVK+ DFG + + Q +E
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 235 --GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
G + W APE + E ++ DV+SFG+VL+EL T +
Sbjct: 178 EPGESPIF-WYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 67
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPEMIEGR 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 67
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+A+FG S R T GT ++ PEMI+ +
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGR 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 67
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD-LCGTLDYLPPEMIEGR 184
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 65
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPEMIEGR 182
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ------QFKSEVALL 129
+G G S ++ R + R VAVK++R A L + +F+ E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLR---------ADLARDPSFYLRFRREAQNA 66
Query: 130 SRLFHPNIVQFI----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP IV A P+ I+ EY+ TLR ++ + P ++ + + + D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYR 241
+ + + H G+IHRD+K VKV DFG + +T +GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+++PE + + DVYS G VL+E+ T PF G +PV A+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Query: 152 IITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXX 211
I E+ +GTL ++ K+ L L L I++G++Y+HS+ +IHRDLK
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV 170
Query: 212 DDMRVKVADFG-TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +VK+ DFG + L+ + T+ + GT R+M+PE I + Y ++VD+Y+ G++L EL
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGKRTR-SKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 64
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY GT+ L K + + +++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPEMIEGR 181
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 28/229 (12%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIY----------RGIYKQRAVAVKMVRIPNQIE 112
KE E+ AD SQ + G+ +++ R +Y + + +++ +++
Sbjct: 15 KEGHEK--ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV- 71
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
R K+E+ EV HP IV+ A + +I +++ G L L+K+
Sbjct: 72 --RTKMERDILVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--- 120
Query: 173 SLSTETVLRLAL-DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ TE ++ L +++ +++LHS G+I+RDLK ++ +K+ DFG S E+
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDH 179
Query: 232 ETKGNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
E K GT +MAPE++ + +T+ D +SFG++++E+ T LPFQG
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 28/229 (12%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIY----------RGIYKQRAVAVKMVRIPNQIE 112
KE E+ AD SQ + G+ +++ R +Y + + +++ +++
Sbjct: 16 KEGHEK--ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV- 72
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
R K+E+ EV HP IV+ A + +I +++ G L L+K+
Sbjct: 73 --RTKMERDILVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--- 121
Query: 173 SLSTETVLRLAL-DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ TE ++ L +++ +++LHS G+I+RDLK ++ +K+ DFG S E+
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDH 180
Query: 232 ETKGNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
E K GT +MAPE++ + +T+ D +SFG++++E+ T LPFQG
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 6/209 (2%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSR 131
L IG G +Y KQ + + V Q+E +A +E Q + EV + S
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE--KAGVEHQLRREVEIQSH 69
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
L HPNI++ +I EY +G + L K + + +++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
Y HS+ VIHRD+K +K+ADFG S R GT ++ PEMI+ +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LXGTLDYLPPEMIEGR 186
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ KVD++S G++ +E PF+ T
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 116/229 (50%), Gaps = 28/229 (12%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIY----------RGIYKQRAVAVKMVRIPNQIE 112
KE E+ AD SQ + G+ +++ R +Y + + +++ +++
Sbjct: 15 KEGHEK--ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV- 71
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
R K+E+ EV HP IV+ A + +I +++ G L L+K+
Sbjct: 72 --RTKMERDILVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--- 120
Query: 173 SLSTETVLRLAL-DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ TE ++ L +++ +++LHS G+I+RDLK ++ +K+ DFG S E+
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDH 179
Query: 232 ETKGNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
E K GT +MAPE++ + +T+ D +SFG++++E+ T LPFQG
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEY 156
Q+ VA+K I Q+ + ++ + + + E++ L L HP+I++ P ++ EY
Sbjct: 34 QQKVALKF--ISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90
Query: 157 MSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV 216
+ G L Y+ +K+ ++ + R I +EY H ++HRDLK D++ V
Sbjct: 91 -AGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNV 147
Query: 217 KVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFGIVLWELTTALLP 275
K+ADFG S + T K + G+ + APE+I K Y +VDV+S GIVL+ + LP
Sbjct: 148 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
Query: 276 F 276
F
Sbjct: 208 F 208
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 117 KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLST 176
K + F SE +++ + HPN++ K IITE+M G+L +L + + +
Sbjct: 50 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTV 108
Query: 177 ETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETK- 234
++ + I+ GM+YL +HR L + ++ KV+DFG S LE +
Sbjct: 109 IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 235 ----GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT-ALLPFQGMT 280
G RW APE I+ + +T DV+S+GIV+WE+ + P+ MT
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 219
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ 120
K+D E+ +DL ++ G+ +Y R + VA+K + + + Q
Sbjct: 10 KDDPEKLFSDLREI------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW---Q 60
Query: 121 QFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEY-MSQGTLRMYLNKKEPYSLSTETV 179
EV L +L HPN +Q+ + ++ EY + + + ++KK + V
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV 120
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGT 239
AL +G+ YLHS +IHRD+K+ + VK+ DFG++ + +GT
Sbjct: 121 THGAL---QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGT 174
Query: 240 YRWMAPEMI---KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
WMAPE+I E Y KVDV+S GI EL P M + A + +A+ S
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 11/157 (7%)
Query: 122 FKSEVALLSRLFHPNIVQFIAAC--KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETV 179
+K E+ +L L+H +I+++ C + ++ EY+ G+LR YL + +S+ +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE-----TK 234
L A I GM YLH+Q IHR+L + +D VK+ DFG + + E
Sbjct: 120 LLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
G+ + W APE +KE + DV+SFG+ L+EL T
Sbjct: 180 GDSPVF-WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ------QFKSEVALL 129
+G G S ++ R + R VAVK++R A L + +F+ E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLR---------ADLARDPSFYLRFRREAQNA 66
Query: 130 SRLFHPNIVQFI----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP IV A P+ I+ EY+ TLR ++ + P ++ + + + D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYR 241
+ + + H G+IHRD+K VKV DFG + +T +GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+++PE + + DVYS G VL+E+ T PF G +PV A+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 81 KFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K SGA+ + R A+K++R + + +KL + EVA+L L HPNI+
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE----EVAVLKLLDHPNIM 99
Query: 139 QFIAACKKPPVYCIITEYMSQGTL------RMYLNKKEPYSLSTETVLRLALDISRGMEY 192
+ + Y ++ E G L RM N+ + +++ L G+ Y
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNE-----VDAAVIIKQVL---SGVTY 151
Query: 193 LHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK 249
LH ++HRDLK D +K+ DFG S + ++ K +GT ++APE+++
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+K Y K DV+S G++L+ L PF G T Q EK Y
Sbjct: 212 KK-YDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILRKVEKGKY 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 21/237 (8%)
Query: 63 KEDQEEWTADLSQLFIGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ 120
K+D E+ +DL ++ G+ +Y R + VA+K + + ++ K +
Sbjct: 49 KDDPEKLFSDLREI------GHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQD 100
Query: 121 QFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEY-MSQGTLRMYLNKKEPYSLSTETV 179
K EV L +L HPN +Q+ + ++ EY + + + ++KK + V
Sbjct: 101 IIK-EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV 159
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGT 239
AL +G+ YLHS +IHRD+K+ + VK+ DFG++ + +GT
Sbjct: 160 THGAL---QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF---VGT 213
Query: 240 YRWMAPEMI---KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
WMAPE+I E Y KVDV+S GI EL P M + A + +A+ S
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES 270
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 66 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 122
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 123 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 182
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTE 177
+ F+ E+ +L L H NIV++ C + I EY+ G+LR YL K + +
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHI 115
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----- 232
+L+ I +GMEYL ++ IHR+L + ++ RVK+ DFG + + Q +E
Sbjct: 116 KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK 175
Query: 233 TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
G + W APE + E ++ DV+SFG+VL+EL T +
Sbjct: 176 EPGESPIF-WYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ------QFKSEVALL 129
+G G S ++ R + R VAVK++R A L + +F+ E
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVLR---------ADLARDPSFYLRFRREAQNA 66
Query: 130 SRLFHPNIVQFIAA--CKKP--PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP IV A + P P+ I+ EY+ TLR ++ + P ++ + + + D
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYR 241
+ + + H G+IHRD+K VKV DFG + +T +GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+++PE + + DVYS G VL+E+ T PF G +PV A+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 70 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 126
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 127 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 186
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 187 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K GA +Y + + VA++ + + Q ++ + +E+ ++ +PNIV
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK------ELIINEILVMRENKNPNIV 80
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + ++ EY++ G+L + + V R L + +E+LHS V
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQV 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKPYTRKV 257
IHRD+KS D VK+ DFG T + + M GT WMAPE++ K Y KV
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 258 DVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
D++S GI+ E+ P+ P++A + +A
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL 132
L QL GN F S R Y + V + ++ + EE + F+ E+ +L L
Sbjct: 18 LQQLGKGN-FGSVEMCR-YDPLQDNTGEVVAVKKLQHSTEEHL----RDFEREIEILKSL 71
Query: 133 FHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
H NIV++ C + I EY+ G+LR YL + + +L+ I +GM
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGM 130
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK-----GNMGTYRWMAP 245
EYL ++ IHRDL + ++ RVK+ DFG + + Q +E G + W AP
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WYAP 189
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTTAL 273
E + E ++ DV+SFG+VL+EL T +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKS 124
+ +W L IG G +Y K + + V Q+E +A +E Q +
Sbjct: 2 KRQWA--LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLE--KAGVEHQLRR 57
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV + S L HPNI++ +I EY GT+ L K + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
+++ + Y HS+ VIHRD+K +K+ADFG S R GT ++
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLP 174
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
PEMI+ + + KVD++S G++ +E PF+ T
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 75 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 131
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 132 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 191
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 192 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
+GA S + I + K+V I +E E ++E+A+L ++ HPNIV
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
+ +I + +S G L + +K Y+ + RL + ++YLH G++HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--RLIFQVLDAVKYLHDLGIVHR 140
Query: 202 DLKSXXX---XXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVD 258
DLK +D ++ ++DFG S +E GT ++APE++ +KPY++ VD
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 259 VYSFGIVLWELTTALLPF 276
+S G++ + L PF
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
+GA S + I + K+V I +E E ++E+A+L ++ HPNIV
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
+ +I + +S G L + +K Y+ + RL + ++YLH G++HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--RLIFQVLDAVKYLHDLGIVHR 140
Query: 202 DLKSXXX---XXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVD 258
DLK +D ++ ++DFG S +E GT ++APE++ +KPY++ VD
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 259 VYSFGIVLWELTTALLPF 276
+S G++ + L PF
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 82 FASGAHSRIYRGIYKQRA------VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
SGA +Y+GI+ VA+K++R E T K ++ E +++ + P
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-----ENTSPKANKEILDEAYVMAGVGSP 79
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
+ + + C V ++T+ M G L ++ + L ++ +L + I++GM YL
Sbjct: 80 YVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQIAKGMSYLED 137
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYRWMAPEMIKEK 251
++HRDL + VK+ DFG + L ET+ G + +WMA E I +
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV-PIKWMALESILRR 196
Query: 252 PYTRKVDVYSFGIVLWELTT-ALLPFQGM 279
+T + DV+S+G+ +WEL T P+ G+
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K GA +Y + + VA++ + + Q ++ + +E+ ++ +PNIV
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK------ELIINEILVMRENKNPNIV 80
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + ++ EY++ G+L + + V R L + +E+LHS V
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQV 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKPYTRKV 257
IHRD+KS D VK+ DFG T + + M GT WMAPE++ K Y KV
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 258 DVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
D++S GI+ E+ P+ P++A + +A
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 77 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 133
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 134 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 193
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 194 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 235
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K GA +Y + + VA++ + + Q ++ + +E+ ++ +PNIV
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK------ELIINEILVMRENKNPNIV 80
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + ++ EY++ G+L + + V R L + +E+LHS V
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQV 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN--MGTYRWMAPEMIKEKPYTRK 256
IHRD+KS D VK+ DFG C + ++K + +GT WMAPE++ K Y K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
VD++S GI+ E+ P+ P++A + +A
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 78 IGNKFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+GN G+ + +YR I+ VA+KM+ ++ +A + Q+ ++EV + +L HP
Sbjct: 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMI---DKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYL-NKKEPYSLSTETVLRLALDISRGMEYLH 194
+I++ + ++ E G + YL N+ +P+S I GM YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFS--ENEARHFMHQIITGMLYLH 129
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKPY 253
S G++HRDL +M +K+ADFG + E + GT +++PE+ +
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 254 TRKVDVYSFGIVLWELTTALLPF 276
+ DV+S G + + L PF
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPF 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
+GA S + I + K+V I +E E ++E+A+L ++ HPNIV
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
+ +I + +S G L + +K Y+ + RL + ++YLH G++HR
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS--RLIFQVLDAVKYLHDLGIVHR 140
Query: 202 DLKSXXX---XXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVD 258
DLK +D ++ ++DFG S +E GT ++APE++ +KPY++ VD
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVD 200
Query: 259 VYSFGIVLWELTTALLPF 276
+S G++ + L PF
Sbjct: 201 CWSIGVIAYILLCGYPPF 218
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K GA +Y + + VA++ + + Q ++ + +E+ ++ +PNIV
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK------ELIINEILVMRENKNPNIV 81
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + ++ EY++ G+L + + V R L + +E+LHS V
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQV 138
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN--MGTYRWMAPEMIKEKPYTRK 256
IHRD+KS D VK+ DFG C + ++K + +GT WMAPE++ K Y K
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
VD++S GI+ E+ P+ P++A + +A
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 86 AHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
A ++ R I + VAVK++ ++ + + L++ F+ EV + L HPNIV+ +
Sbjct: 28 AKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIE 83
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLHSQGVIHRDLK 204
++ EY S G + YL + E R I ++Y H + ++HRDLK
Sbjct: 84 TEKTLYLVXEYASGGEVFDYL---VAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFG 263
+ D +K+ADFG S T + G + APE+ + K Y +VDV+S G
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 264 IVLWELTTALLPFQGMT 280
++L+ L + LPF G
Sbjct: 201 VILYTLVSGSLPFDGQN 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 120 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 176
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 177 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 236
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 237 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 278
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 4/217 (1%)
Query: 61 VSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQ 120
++++ + + + +G+ G ++ G ++ V V+I N+ + +
Sbjct: 3 MAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVA-VKILNRQKIRSLDVVG 61
Query: 121 QFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVL 180
+ + E+ L HP+I++ P ++ EY+S G L Y+ K L +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESR 119
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
RL I G++Y H V+HRDLK M K+ADFG S + + + + G+
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSP 179
Query: 241 RWMAPEMIKEKPYT-RKVDVYSFGIVLWELTTALLPF 276
+ APE+I + Y +VD++S G++L+ L LPF
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
+EV ++ H N+V+ + ++ E++ G L + ++ E + +
Sbjct: 197 NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVC 253
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGNMGTYRW 242
L + + + LH+QGVIHRD+KS D RVK++DFG + + + K +GT W
Sbjct: 254 LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYW 313
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
MAPE+I PY +VD++S GI++ E+ P+ P++A
Sbjct: 314 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA 355
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 69 WTADLSQLFI-GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEV 126
+ + LFI K SGA ++ + ++R+ ++ R+ I + R+++ +Q ++E+
Sbjct: 16 FQGTIDDLFIFKRKLGSGAFGDVH--LVEERSSGLE--RVIKTINKDRSQVPMEQIEAEI 71
Query: 127 ALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVLRLAL 184
+L L HPNI++ + I+ E G L R+ + +LS V L
Sbjct: 72 EVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK 131
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXD---DMRVKVADFGTSCLETQCRETKGNMGTYR 241
+ + Y HSQ V+H+DLK D +K+ DFG + L + GT
Sbjct: 132 QMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTAL 191
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+MAPE+ K + T K D++S G+V++ L T LPF G +
Sbjct: 192 YMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ------QFKSEVALL 129
+G G S ++ R + R VAVK++R A L + +F+ E
Sbjct: 16 LGEILGFGGMSEVHLARDLRLHRDVAVKVLR---------ADLARDPSFYLRFRREAQNA 66
Query: 130 SRLFHPNIVQFI----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP IV A P+ I+ EY+ TLR ++ + P ++ + + + D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYR 241
+ + + H G+IHRD+K VKV DFG + +T +GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+++PE + + DVYS G VL+E+ T PF G +PV A+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK ++ E +L ++ E+ +L L+H +IV++ C+ + + EY+
Sbjct: 40 VAVKALK-----EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G+LR YL + + + +L A I GM YLH+Q IHR L + +D VK
Sbjct: 95 PLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVK 151
Query: 218 VADFGTSCLETQCRE-----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ DFG + + E G+ + W APE +KE + DV+SFG+ L+EL T
Sbjct: 152 IGDFGLAKAVPEGHEYYRVREDGDSPVF-WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK ++ E +L ++ E+ +L L+H +IV++ C+ + + EY+
Sbjct: 41 VAVKALK-----EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G+LR YL + + + +L A I GM YLH+Q IHR L + +D VK
Sbjct: 96 PLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVK 152
Query: 218 VADFGTSCLETQCRE-----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ DFG + + E G+ + W APE +KE + DV+SFG+ L+EL T
Sbjct: 153 IGDFGLAKAVPEGHEYYRVREDGDSPVF-WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+G G S ++ R + R VAVK++R + + +F+ E + L HP
Sbjct: 33 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPS---FYLRFRREAQNAAALNHP 89
Query: 136 NIVQFI----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
IV A P+ I+ EY+ TLR ++ + P ++ + + + D + +
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALN 147
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYRWMAPEM 247
+ H G+IHRD+K VKV DFG + +T +GT ++++PE
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 248 IKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+ + DVYS G VL+E+ T PF G +PV A+
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV LL +L HPNI++ + + I+ E + G L + K++ +S R+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIK 128
Query: 185 DISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR 241
+ G+ Y+H ++HRDLK D +K+ DFG S Q + K +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE+++ Y K DV+S G++L+ L + PF G
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP--PVYCIITEYM 157
VAVK Q++ + ++ F+ E+ +L L IV++ P P ++ EY+
Sbjct: 39 VAVK------QLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G LR +L + L +L + I +GMEYL S+ +HRDL + + VK
Sbjct: 93 PSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 151
Query: 218 VADFGTSCL-----ETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ADFG + L + G + W APE + + ++R+ DV+SFG+VL+EL T
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIF-WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D+S + I +G + RG K V I + ++F SE +++ +
Sbjct: 12 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQ 71
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
HPNI++ I+TE+M G L +L + + ++ + I+ GM
Sbjct: 72 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMR 130
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRE-----TKGNMGTYRWMAP 245
YL +HRDL + ++ KV+DFG S LE + + G RW AP
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTT 271
E I + +T D +S+GIV+WE+ +
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ HP
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NI+ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVSY 235
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
D+S + I +G + RG K V I + ++F SE +++ +
Sbjct: 14 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQ 73
Query: 132 LFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGME 191
HPNI++ I+TE+M G L +L + + ++ + I+ GM
Sbjct: 74 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMR 132
Query: 192 YLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRE-----TKGNMGTYRWMAP 245
YL +HRDL + ++ KV+DFG S LE + + G RW AP
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 246 EMIKEKPYTRKVDVYSFGIVLWELTT 271
E I + +T D +S+GIV+WE+ +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 73 LSQLFIGNKFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLS 130
L+ I K G S +YR + VA+K V+I + ++ AK E+ LL
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD---AKARADCIKEIDLLK 87
Query: 131 RLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLN--KKEPYSLSTETVLRLALDISR 188
+L HPN++++ A+ + I+ E G L + KK+ + TV + + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPEM 247
+E++HS+ V+HRD+K VK+ D G ++ +GT +M+PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 248 IKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
I E Y K D++S G +L+E+ PF G
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Query: 81 KFASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K GA +Y + + VA++ + + Q ++ + +E+ ++ +PNIV
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK------ELIINEILVMRENKNPNIV 81
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
++ + ++ EY++ G+L + + V R L + +E+LHS V
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQV 138
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKPYTRKV 257
IHR++KS D VK+ DFG T + + M GT WMAPE++ K Y KV
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 258 DVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
D++S GI+ E+ P+ P++A + +A
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIA 230
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEY 156
Q+ VA+K + +E +E +E+A+L ++ HPNIV + +I +
Sbjct: 43 QKLVAIKCIA-KKALEGKEGSME----NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQL 97
Query: 157 MSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXX---XXXDD 213
+S G L + +K Y+ + RL + ++YLH G++HRDLK +D
Sbjct: 98 VSGGELFDRIVEKGFYTERDAS--RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 214 MRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
++ ++DFG S +E GT ++APE++ +KPY++ VD +S G++ + L
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 274 LPF 276
PF
Sbjct: 216 PPF 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFHPNIVQF 140
SG +++G++ ++K+ IE+ + Q + + L H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C + ++T+Y+ G+L ++ + +L + +L + I++GM YL G++H
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVH 138
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
R+L + +V+VADFG + L + Q ++ +WMA E I YT +
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT-PIKWMALESIHFGKYTHQ 197
Query: 257 VDVYSFGIVLWELTT-ALLPFQGM 279
DV+S+G+ +WEL T P+ G+
Sbjct: 198 SDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 9/204 (4%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFHPNIVQF 140
SG +++G++ ++K+ IE+ + Q + + L H +IV+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ C + ++T+Y+ G+L ++ + +L + +L + I++GM YL G++H
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVH 156
Query: 201 RDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
R+L + +V+VADFG + L + Q ++ +WMA E I YT +
Sbjct: 157 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT-PIKWMALESIHFGKYTHQ 215
Query: 257 VDVYSFGIVLWELTT-ALLPFQGM 279
DV+S+G+ +WEL T P+ G+
Sbjct: 216 SDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 22/235 (9%)
Query: 54 ENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRI----PN 109
+ + W +KE +++ + IG +S ++R + AV + V P
Sbjct: 81 DELPDWAAAKEFYQKYDP---KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE 137
Query: 110 QIEETRAKLEQQFKSEVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK 168
Q+EE R + + E +L ++ HP+I+ I + + ++ + M +G L YL +
Sbjct: 138 QLEEVR----EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE 193
Query: 169 KEPYS-LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE 227
K S T +++R L+ + +LH+ ++HRDLK D+M+++++DFG SC
Sbjct: 194 KVALSEKETRSIMRSLLE---AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
Query: 228 TQCRETKGNMGTYRWMAPEMIK------EKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + GT ++APE++K Y ++VD+++ G++L+ L PF
Sbjct: 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G +Y G Y +A I + T + + F E L+ L HPN++ I
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 142 AACKKPP-VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
P + ++ YM G L ++ + + + + ++ L ++RGMEYL Q +H
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS--CLETQ---CRETKGNMGTYRWMAPEMIKEKPYTR 255
RDL + + VKVADFG + L+ + ++ + +W A E ++ +T
Sbjct: 148 RDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT 207
Query: 256 KVDVYSFGIVLWELTT-ALLPFQGMTPVQAAFAVAE 290
K DV+SFG++LWEL T P++ + P +A+
Sbjct: 208 KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV LL +L HPNI++ + + I+ E + G L + K++ +S R+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIK 128
Query: 185 DISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR 241
+ G+ Y+H ++HRDLK D +K+ DFG S Q + K +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE+++ Y K DV+S G++L+ L + PF G
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 78 IGNKFASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ------QFKSEVALL 129
+G G S ++ R + R VAVK++R A L + +F+ E
Sbjct: 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLR---------ADLARDPSFYLRFRREAQNA 66
Query: 130 SRLFHPNIVQFI----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP IV A P+ I+ EY+ TLR ++ + P ++ + + + D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIAD 124
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCL----ETQCRETKGNMGTYR 241
+ + + H G+IHRD+K VKV DFG + +T +GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAF 286
+++PE + + DVYS G VL+E+ T PF G +P A+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAY 229
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
G + ++RG ++ VAVK I +R + ++E+ L H NI+ FIA
Sbjct: 17 GKGRYGEVWRGSWQGENVAVK-------IFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 143 AC----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH---- 194
+ +IT Y G+L YL + +L T + LR+ L I+ G+ +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 195 -SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE--TKGN---MGTYRWMAP 245
+QG + HRDLKS + + +AD G + + +Q GN +GT R+MAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 246 EMIKEKPYT------RKVDVYSFGIVLWELTTALL----------PFQGMTPVQAAFAVA 289
E++ E ++VD+++FG+VLWE+ ++ PF + P +F
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 290 EKV 292
KV
Sbjct: 247 RKV 249
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 80 NKFASGAHSRIYRG-IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
N G ++Y+G + VAVK ++ EE E QF++EV ++S H N++
Sbjct: 44 NILGRGGFGKVYKGRLADGTLVAVKRLK-----EERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS---LSTETVLRLALDISRGMEYLHS 195
+ C P ++ YM+ G++ L ++ P S L R+AL +RG+ YLH
Sbjct: 99 RLRGFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHD 157
Query: 196 Q---GVIHRDLKSXXXXXXDDMRVKVADFGTSCLET--QCRETKGNMGTYRWMAPEMIKE 250
+IHRD+K+ ++ V DFG + L GT +APE +
Sbjct: 158 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLST 217
Query: 251 KPYTRKVDVYSFGIVLWELTTALLPF 276
+ K DV+ +G++L EL T F
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
G + ++RG ++ VAVK I +R + ++E+ L H NI+ FIA
Sbjct: 17 GKGRYGEVWRGSWQGENVAVK-------IFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 143 AC----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH---- 194
+ +IT Y G+L YL + +L T + LR+ L I+ G+ +LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 195 -SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE--TKGN---MGTYRWMAP 245
+QG + HRDLKS + + +AD G + + +Q GN +GT R+MAP
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 246 EMIKEKPYT------RKVDVYSFGIVLWELTTALL----------PFQGMTPVQAAFAVA 289
E++ E ++VD+++FG+VLWE+ ++ PF + P +F
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDM 246
Query: 290 EKV 292
KV
Sbjct: 247 RKV 249
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 122 FKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYMSQGTLRMYLNKKEPYSLSTETV 179
K E+ +L L+H NIV++ C + I I E++ G+L+ YL K + ++ +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQ 128
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGT 239
L+ A+ I +GM+YL S+ +HRDL + + +VK+ DFG T+ ET T
Sbjct: 129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL----TKAIETDKEXXT 184
Query: 240 YR--------WMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ W APE + + + DV+SFG+ L EL T
Sbjct: 185 VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
EV LL +L HPNI++ + + I+ E + G L + K++ +S R+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIK 128
Query: 185 DISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR 241
+ G+ Y+H ++HRDLK D +K+ DFG S Q + K +GT
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE+++ Y K DV+S G++L+ L + PF G
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK ++ E+ K E+ +L L+H NIV++ C + I I E++
Sbjct: 41 VAVKSLK-----PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G+L+ YL K + ++ + L+ A+ I +GM+YL S+ +HRDL + + +VK
Sbjct: 96 PSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 154
Query: 218 VADFGTSCLETQCRETKGNMGTYR--------WMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
+ DFG T+ ET T + W APE + + + DV+SFG+ L EL
Sbjct: 155 IGDFGL----TKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
Query: 270 TT 271
T
Sbjct: 211 LT 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSE 125
+ + + +G+ G ++ G ++ V V+I N+ + + + K E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVA-VKILNRQKIRSLDVVGKIKRE 61
Query: 126 VALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP+I++ P + ++ EY+S G L Y+ K + RL
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQ 119
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
I ++Y H V+HRDLK M K+ADFG S + + + + G+ + AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 246 EMIKEKPYTR-KVDVYSFGIVLWELTTALLPF 276
E+I + Y +VD++S G++L+ L LPF
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 47/245 (19%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR--LFHPNIVQF 140
G + ++RG ++ VAVK+ ++ E+ + E L + L H NI+ F
Sbjct: 46 GKGRYGEVWRGSWQGENVAVKIFS---------SRDEKSWFRETELYNTVMLRHENILGF 96
Query: 141 IAAC----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH-- 194
IA+ +IT Y G+L YL + +L T + LR+ L I+ G+ +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 195 ---SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE--TKGN---MGTYRWM 243
+QG + HRDLKS + + +AD G + + +Q GN +GT R+M
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 244 APEMIKEKPYT------RKVDVYSFGIVLWELTTALL----------PFQGMTPVQAAFA 287
APE++ E ++VD+++FG+VLWE+ ++ PF + P +F
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 273
Query: 288 VAEKV 292
KV
Sbjct: 274 DMRKV 278
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 30/180 (16%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP---VYCIITEYMSQGTLRMYLNKK 169
+ R +EQ ++ E+A+L +L HPN+V+ + P +Y ++ E ++QG + M +
Sbjct: 75 QPRGPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLY-MVFELVNQGPV-MEVPTL 131
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQ 229
+P LS + D+ +G+EYLH Q +IHRD+K +D +K+ADFG S
Sbjct: 132 KP--LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS----- 184
Query: 230 CRETKGN-------MGTYRWMAPEMIKEKPYTRKV------DVYSFGIVLWELTTALLPF 276
E KG+ +GT +MAPE + E TRK+ DV++ G+ L+ PF
Sbjct: 185 -NEFKGSDALLSNTVGTPAFMAPESLSE---TRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 4/212 (1%)
Query: 66 QEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSE 125
+ + + +G+ G ++ G ++ V V+I N+ + + + K E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVA-VKILNRQKIRSLDVVGKIKRE 61
Query: 126 VALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD 185
+ L HP+I++ P + ++ EY+S G L Y+ K + RL
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQ 119
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
I ++Y H V+HRDLK M K+ADFG S + + + + G+ + AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 246 EMIKEKPYTR-KVDVYSFGIVLWELTTALLPF 276
E+I + Y +VD++S G++L+ L LPF
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFH 134
I + GA ++Y+ K+ A K++ ET+++ E + + E+ +L+ H
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVI-------ETKSEEELEDYIVEIEILATCDH 75
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P IV+ + A I+ E+ G + + + + L+ + + + + +LH
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLH 134
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEMI----- 248
S+ +IHRDLK+ + +++ADFG S + + + + +GT WMAPE++
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
K+ PY K D++S GI L E+ P + P++ +A+
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 236
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 17/222 (7%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLE-QQFKSEVALLSRLFH 134
I + GA ++Y+ K+ A K++ ET+++ E + + E+ +L+ H
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVI-------ETKSEEELEDYIVEIEILATCDH 67
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P IV+ + A I+ E+ G + + + + L+ + + + + +LH
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLH 126
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGN-MGTYRWMAPEMI----- 248
S+ +IHRDLK+ + +++ADFG S + + + + +GT WMAPE++
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
K+ PY K D++S GI L E+ P + P++ +A+
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 47/245 (19%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF--HPNIVQF 140
G + ++RG++ +VAVK+ ++ EQ + E + + + H NI+ F
Sbjct: 17 GKGRYGEVWRGLWHGESVAVKIFS---------SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 141 IAAC----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH-- 194
IA+ +IT Y G+L +L ++ +L LRLA+ + G+ +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ---TLEPHLALRLAVSAACGLAHLHVE 124
Query: 195 ---SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE--TKGN---MGTYRWM 243
+QG + HRD KS +++ +AD G + + +Q + GN +GT R+M
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 244 APEMIKEKPYT------RKVDVYSFGIVLWELTTALL----------PFQGMTPVQAAFA 287
APE++ E+ T + D+++FG+VLWE+ + PF + P +F
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE 244
Query: 288 VAEKV 292
+KV
Sbjct: 245 DMKKV 249
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 82 FASGAHSRIYRGIYKQ--RAVAVKMVRIPN----QIEETRAKLEQQFKSEVALLSRL-FH 134
G S + R I+K + AVK++ + EE + E K EV +L ++ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 83
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYL 193
PNI+Q + + ++ + M +G L YL +K S T ++R L++ + L
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV---ICAL 140
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK---- 249
H ++HRDLK DDM +K+ DFG SC + + GT ++APE+I+
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMN 200
Query: 250 --EKPYTRKVDVYSFGIVLWELTTALLPF 276
Y ++VD++S G++++ L PF
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ G+ +Y+G+ + V V + ++ + T+++ Q+FK E L L HPNIV+F
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDR-KLTKSE-RQRFKEEAEXLKGLQHPNIVRF 90
Query: 141 I----AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLR-LALDISRGMEYLHS 195
+ K ++TE + GTL+ YL + + + VLR I +G+++LH+
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKR---FKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 196 QG--VIHRDLKSXXXXXXDDM-RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ +IHRDLK VK+ D G + L+ + K +GT + APE +EK
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK-RASFAKAVIGTPEFXAPEXYEEK- 205
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y VDVY+FG E T+ P+
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPY 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTE 177
E ++E+A+L ++ H NIV + P ++ + +S G L + +K Y+
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS 123
Query: 178 TVLRLALDISRGMEYLHSQGVIHRDLKSXXX---XXXDDMRVKVADFGTSCLETQCRETK 234
T++R LD + YLH G++HRDLK ++ ++ ++DFG S +E +
Sbjct: 124 TLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS 180
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++ +KPY++ VD +S G++ + L PF
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+ + GA S + R ++K + A K++ ++ A+ Q+ + E + +L HP
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQHP 65
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NIV+ + ++ + ++ + ++ G L + +E YS + + I + Y HS
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIAYCHS 123
Query: 196 QGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
G++HR+LK + VK+ADFG + G GT +++PE++K+ P
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y++ VD+++ G++L+ L PF
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+ + GA S + R ++K + A K++ ++ A+ Q+ + E + +L HP
Sbjct: 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQHP 65
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NIV+ + ++ + ++ + ++ G L + +E YS + + I + Y HS
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIAYCHS 123
Query: 196 QGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
G++HR+LK + VK+ADFG + G GT +++PE++K+ P
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y++ VD+++ G++L+ L PF
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+ + GA S + R ++K + A K++ ++ A+ Q+ + E + +L HP
Sbjct: 9 VKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQHP 64
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NIV+ + ++ + ++ + ++ G L + +E YS + + I + Y HS
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIAYCHS 122
Query: 196 QGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
G++HR+LK + VK+ADFG + G GT +++PE++K+ P
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y++ VD+++ G++L+ L PF
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPF 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 82 FASGAHSRIYRGIYKQ--RAVAVKMVRIPN----QIEETRAKLEQQFKSEVALLSRL-FH 134
G S + R I+K + AVK++ + EE + E K EV +L ++ H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 70
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYL 193
PNI+Q + + ++ + M +G L YL +K S T ++R L++ + L
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV---ICAL 127
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK---- 249
H ++HRDLK DDM +K+ DFG SC + + GT ++APE+I+
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 250 --EKPYTRKVDVYSFGIVLWELTTALLPF 276
Y ++VD++S G++++ L PF
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G +Y G+Y V + ++ +++F SE ++ L HP+IV+ I
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
++ P + II E G L YL + + SL T++ +L I + M YL S +HR
Sbjct: 80 GIIEEEPTW-IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHR 137
Query: 202 DLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG--TYRWMAPEMIKEKPYTRKVDV 259
D+ VK+ DFG S K ++ +WM+PE I + +T DV
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 197
Query: 260 YSFGIVLWELTT 271
+ F + +WE+ +
Sbjct: 198 WMFAVCMWEILS 209
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
K E +L+ + HP +V+ A + +I +++ G L L+K+ + TE ++
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKF 134
Query: 183 AL-DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM--GT 239
L +++ G+++LHS G+I+RDLK ++ +K+ DFG S E E K GT
Sbjct: 135 YLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGT 193
Query: 240 YRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+MAPE++ + ++ D +S+G++++E+ T LPFQG
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 80 NKFASGAHSRIYRG-IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
N G ++Y+G + VAVK ++ EE E QF++EV ++S H N++
Sbjct: 36 NILGRGGFGKVYKGRLADGXLVAVKRLK-----EERTQGGELQFQTEVEMISMAVHRNLL 90
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS---LSTETVLRLALDISRGMEYLHS 195
+ C P ++ YM+ G++ L ++ P S L R+AL +RG+ YLH
Sbjct: 91 RLRGFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 196 Q---GVIHRDLKSXXXXXXDDMRVKVADFGTSCL-----ETQCRETKGNMGTYRWMAPEM 247
+IHRD+K+ ++ V DFG + L +G +G +APE
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGH---IAPEY 206
Query: 248 IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + K DV+ +G++L EL T F
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 82 FASGAHSRIYRGIYKQ--RAVAVKMVRIPN----QIEETRAKLEQQFKSEVALLSRL-FH 134
G S + R I+K + AVK++ + EE + E K EV +L ++ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKVSGH 83
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYL 193
PNI+Q + + ++ + M +G L YL +K S T ++R L++ + L
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV---ICAL 140
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK---- 249
H ++HRDLK DDM +K+ DFG SC + + GT ++APE+I+
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200
Query: 250 --EKPYTRKVDVYSFGIVLWELTTALLPF 276
Y ++VD++S G++++ L PF
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
+ + GA S + R ++K + A K++ ++ A+ Q+ + E + +L HP
Sbjct: 33 VKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQHP 88
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NIV+ + ++ + ++ + ++ G L + +E YS + + I + Y HS
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIAYCHS 146
Query: 196 QGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
G++HR+LK + VK+ADFG + G GT +++PE++K+ P
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y++ VD+++ G++L+ L PF
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPF 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G +Y G+Y V + ++ +++F SE ++ L HP+IV+ I
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
++ P + II E G L YL + + SL T++ +L I + M YL S +HR
Sbjct: 92 GIIEEEPTW-IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHR 149
Query: 202 DLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG--TYRWMAPEMIKEKPYTRKVDV 259
D+ VK+ DFG S K ++ +WM+PE I + +T DV
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 209
Query: 260 YSFGIVLWELTT 271
+ F + +WE+ +
Sbjct: 210 WMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G +Y G+Y V + ++ +++F SE ++ L HP+IV+ I
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
++ P + II E G L YL + + SL T++ +L I + M YL S +HR
Sbjct: 76 GIIEEEPTW-IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHR 133
Query: 202 DLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG--TYRWMAPEMIKEKPYTRKVDV 259
D+ VK+ DFG S K ++ +WM+PE I + +T DV
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 193
Query: 260 YSFGIVLWELTT 271
+ F + +WE+ +
Sbjct: 194 WMFAVCMWEILS 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 115 RAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL 174
R ++ + EV +L + HPNI+ + +I E +S G L +L +KE SL
Sbjct: 55 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SL 112
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQC 230
+ + + I G+ YLHS+ + H DLK D + R+K+ DFG +
Sbjct: 113 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 231 RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
E K GT ++APE++ +P + D++S G++ + L + PF G T
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 101 AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQG 160
A K ++ R ++ + EV +L + HPNI+ + +I E +S G
Sbjct: 55 AAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG 114
Query: 161 TLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD----DMRV 216
L +L +KE SL+ + + I G+ YLHS+ + H DLK D + R+
Sbjct: 115 ELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRI 172
Query: 217 KVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
K+ DFG + E K GT ++APE++ +P + D++S G++ + L + PF
Sbjct: 173 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 277 QGMT 280
G T
Sbjct: 233 LGET 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
AK K+E +L + HP IV I A + +I EY+S G L M L ++E +
Sbjct: 62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFME 120
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLET--QCRET 233
LA +IS + +LH +G+I+RDLK VK+ DFG C E+ T
Sbjct: 121 DTACFYLA-EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-CKESIHDGTVT 178
Query: 234 KGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
GT +MAPE++ + R VD +S G +++++ T PF G
Sbjct: 179 HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
AK K+E +L + HP IV I A + +I EY+S G L M L ++E +
Sbjct: 62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFME 120
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG 235
LA +IS + +LH +G+I+RDLK VK+ DFG C E+ T
Sbjct: 121 DTACFYLA-EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL-CKESIHDGTVT 178
Query: 236 NM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ GT +MAPE++ + R VD +S G +++++ T PF G
Sbjct: 179 HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 115 RAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL 174
R ++ + EV +L + HPNI+ + +I E +S G L +L +KE SL
Sbjct: 48 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SL 105
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQC 230
+ + + I G+ YLHS+ + H DLK D + R+K+ DFG +
Sbjct: 106 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 231 RETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
E K GT ++APE++ +P + D++S G++ + L + PF G T
Sbjct: 166 NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 83 ASGAHSRIY--RGIYKQRAVAVKMVRIPNQIEETRAKLEQ--QFKSEVALLSRLFHPNIV 138
+G+ R++ R + R A+K+++ +E +L+Q E +LS + HP I+
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLK-----KEIVVRLKQVEHTNDERLMLSIVTHPFII 69
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + +I +Y+ G L L K + A ++ +EYLHS+ +
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVD 258
I+RDLK + +K+ DFG + T GT ++APE++ KPY + +D
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDV--TYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 259 VYSFGIVLWELTTALLPF 276
+SFGI+++E+ PF
Sbjct: 186 WWSFGILIYEMLAGYTPF 203
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK Q++ + ++ F+ E+ +L L IV++ P + + EY+
Sbjct: 42 VAVK------QLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G LR +L + L +L + I +GMEYL S+ +HRDL + + VK
Sbjct: 96 PSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 154
Query: 218 VADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ADFG + L ++ + W APE + + ++R+ DV+SFG+VL+EL T
Sbjct: 155 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 83 ASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
GA S + R I ++ AVK+V + + + + K E ++ L HP+IV+
Sbjct: 33 GKGAFSVVRRCINRETGQQFAVKIVDV-AKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEP--YSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E+M L + K+ + S I + Y H +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 199 IHRDLKSXX---XXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYT 254
IHRD+K + VK+ DFG + L G +GT +MAPE++K +PY
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYG 211
Query: 255 RKVDVYSFGIVLWELTTALLPFQG 278
+ VDV+ G++L+ L + LPF G
Sbjct: 212 KPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK Q++ + ++ F+ E+ +L L IV++ P + + EY+
Sbjct: 55 VAVK------QLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G LR +L + L +L + I +GMEYL S+ +HRDL + + VK
Sbjct: 109 PSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 167
Query: 218 VADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ADFG + L ++ + W APE + + ++R+ DV+SFG+VL+EL T
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCI--ITEYM 157
VAVK Q++ + ++ F+ E+ +L L IV++ P + + EY+
Sbjct: 43 VAVK------QLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 158 SQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVK 217
G LR +L + L +L + I +GMEYL S+ +HRDL + + VK
Sbjct: 97 PSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 155
Query: 218 VADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
+ADFG + L ++ + W APE + + ++R+ DV+SFG+VL+EL T
Sbjct: 156 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 78 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 72 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 128
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 74 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 130
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 190
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 191 SDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 105 VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
++I N+ ++ ++ + + E++ L L HP+I++ K ++ EY + L
Sbjct: 44 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 102
Query: 165 YLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
Y+ +++ +S + R I +EY H ++HRDLK + + VK+ADFG S
Sbjct: 103 YIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Query: 225 CLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFGIVLWELTTALLPF 276
+ T K + G+ + APE+I K Y +VDV+S G++L+ + LPF
Sbjct: 161 NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 105 VRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRM 164
++I N+ ++ ++ + + E++ L L HP+I++ K ++ EY + L
Sbjct: 43 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFD 101
Query: 165 YLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS 224
Y+ +++ +S + R I +EY H ++HRDLK + + VK+ADFG S
Sbjct: 102 YIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Query: 225 CLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFGIVLWELTTALLPF 276
+ T K + G+ + APE+I K Y +VDV+S G++L+ + LPF
Sbjct: 160 NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 84 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 140
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 94 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 94 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 150
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 78 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 134
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 92 IGICEAES-WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 148
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQ 159
VA+K++ N+ ++ ++ + + E++ L L HP+I++ K ++ EY +
Sbjct: 36 VALKII---NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 91
Query: 160 GTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVA 219
L Y+ +++ +S + R I +EY H ++HRDLK + + VK+A
Sbjct: 92 NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA 149
Query: 220 DFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFGIVLWELTTALLPFQ 277
DFG S + T K + G+ + APE+I K Y +VDV+S G++L+ + LPF
Sbjct: 150 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 64
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWELT 270
PE++ K ++ D+Y+ G+V WE+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQ 159
VA+K++ N+ ++ ++ + + E++ L L HP+I++ K ++ EY +
Sbjct: 32 VALKII---NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 87
Query: 160 GTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVA 219
L Y+ +++ +S + R I +EY H ++HRDLK + + VK+A
Sbjct: 88 NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA 145
Query: 220 DFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR-KVDVYSFGIVLWELTTALLPF 276
DFG S + T K + G+ + APE+I K Y +VDV+S G++L+ + LPF
Sbjct: 146 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 102
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWEL 269
PE++ K ++ D+Y+ G+V WE+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 33/211 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 89
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWEL 269
PE++ K ++ D+Y+ G+V WE+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 63
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWELT 270
PE++ K ++ D+Y+ G+V WE+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 69
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWELT 270
PE++ K ++ D+Y+ G+V WE+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 33/212 (15%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
G ++RG ++ VAVK I +R + ++E+ L H NI+ FI
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVK-------IFSSREERSWFREAEIYQTVMLRHENILGFI 66
Query: 142 AACKKP----PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH--- 194
AA K ++++Y G+L YLN+ Y+++ E +++LAL + G+ +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 195 --SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-----KGNMGTYRWMA 244
+QG + HRDLKS + +AD G + +T +GT R+MA
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 245 PEMI------KEKPYTRKVDVYSFGIVLWELT 270
PE++ K ++ D+Y+ G+V WE+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 119 EQQFKSEVALLSRLFHPNIVQF---IAACKKPPVYCIITEYMSQGTLRMYLNK--KEPYS 173
+Q SEV LL L HPNIV++ I +Y I+ EY G L + K KE
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQY 107
Query: 174 LSTETVLRLALDISRGMEYLH--SQG---VIHRDLKSXXXXXXDDMRVKVADFGTS-CLE 227
L E VLR+ ++ ++ H S G V+HRDLK VK+ DFG + L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFA 287
K +GT +M+PE + Y K D++S G +L+EL + PF + + A
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
Query: 288 VAE 290
+ E
Sbjct: 228 IRE 230
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N++ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N++ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY 235
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 132
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 192
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 233
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N++ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVSY 235
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N++ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSY 235
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 132
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 192
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 101 AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQG 160
A K ++ R + + EV++L + HPN++ + +I E ++ G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 161 TLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD----DMRV 216
L +L +KE SL+ E I G+ YLHS + H DLK D R+
Sbjct: 100 ELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 217 KVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
K+ DFG + E K GT ++APE++ +P + D++S G++ + L + PF
Sbjct: 158 KIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 277 QGMTPVQAAFAVAEKVSY 294
G T Q A V+Y
Sbjct: 218 LGDTK-QETLANVSAVNY 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 119 EQQFKSEVALLSRLFHPNIVQF---IAACKKPPVYCIITEYMSQGTLRMYLNK--KEPYS 173
+Q SEV LL L HPNIV++ I +Y I+ EY G L + K KE
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQY 107
Query: 174 LSTETVLRLALDISRGMEYLH--SQG---VIHRDLKSXXXXXXDDMRVKVADFGTS-CLE 227
L E VLR+ ++ ++ H S G V+HRDLK VK+ DFG + L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFA 287
K +GT +M+PE + Y K D++S G +L+EL + PF + + A
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
Query: 288 VAE 290
+ E
Sbjct: 228 IRE 230
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 9/223 (4%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
IG + SG + + + K + A K ++ R ++ + EV++L ++ H
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N++ + +I E +S G L +L +KE SLS E I G+ YLH+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHT 133
Query: 196 QGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
+ + H DLK D +K+ DFG + E K GT ++APE++ +
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
P + D++S G++ + L + PF G T Q A VSY
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVSY 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 436 IGICEAE-SWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 492
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
+ SG + +G Y+ + V + + E L+ + +E ++ +L +P IV+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
I C+ + ++ E G L YL + + + ++ L +S GM+YL +H
Sbjct: 437 IGICEAE-SWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVH 493
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS----CLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
RDL + K++DFG S E + +W APE I ++ K
Sbjct: 494 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Query: 257 VDVYSFGIVLWE-LTTALLPFQGM 279
DV+SFG+++WE + P++GM
Sbjct: 554 SDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y K+ V + V +QIE + +E Q + E+ + + L HPN
Sbjct: 27 IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIE--KEGVEHQLRREIEIQAHLHHPN 84
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYLHS 195
I++ +I EY +G L L K + T T++ +++ + Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME---ELADALMYCHG 141
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+ VIHRD+K +K+ADFG S R K GT ++ PEMI+ + +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR-KTMCGTLDYLPPEMIEGRMHNE 200
Query: 256 KVDVYSFGIVLWELTTALLPFQGMT 280
KVD++ G++ +EL PF+ +
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESAS 225
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 13/133 (9%)
Query: 152 IITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX 207
+ EY++ G L ++ + KEP+++ A +I+ G+ +L S+G+I+RDLK
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQSKGIIYRDLKLDN 151
Query: 208 XXXXDDMRVKVADFGTSCLET--QCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIV 265
+ +K+ADFG C E TK GT ++APE+I +PY + VD ++FG++
Sbjct: 152 VMLDSEGHIKIADFGM-CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 266 LWELTTALLPFQG 278
L+E+ PF+G
Sbjct: 211 LYEMLAGQAPFEG 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 9/222 (4%)
Query: 79 GNKFASGAHSRIYRGIYKQRAV--AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
G + SG + + + K + A K ++ R + + EV++L + HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
++ + +I E ++ G L +L +KE SL+ E I G+ YLHS
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSL 133
Query: 197 GVIHRDLKSXXXXXXD----DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKP 252
+ H DLK D R+K+ DFG + E K GT ++APE++ +P
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEP 193
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVSY 294
+ D++S G++ + L + PF G T Q A V+Y
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTK-QETLANVSAVNY 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K SGA+ + + K + A + ++I + T EVA+L +L HPNI++
Sbjct: 11 KLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYLHSQGV 198
+ Y ++ E G L + ++ +S + +++ L G YLH +
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL---SGTTYLHKHNI 125
Query: 199 IHRDLKSXXXXXXD---DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+HRDLK D +K+ DFG S + K +GT ++APE++++K Y
Sbjct: 126 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK-YDE 184
Query: 256 KVDVYSFGIVLWELTTALLPFQGMT 280
K DV+S G++L+ L PF G T
Sbjct: 185 KCDVWSCGVILYILLCGYPPFGGQT 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 110
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTP 169
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 23/138 (16%)
Query: 152 IITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX 207
+ EY++ G L ++ + KEP+++ A +I+ G+ +L S+G+I+RDLK
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVF------YAAEIAIGLFFLQSKGIIYRDLKLDN 472
Query: 208 XXXXDDMRVKVADFGTSCLETQCRE-------TKGNMGTYRWMAPEMIKEKPYTRKVDVY 260
+ +K+ADFG C+E TK GT ++APE+I +PY + VD +
Sbjct: 473 VMLDSEGHIKIADFGM------CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 261 SFGIVLWELTTALLPFQG 278
+FG++L+E+ PF+G
Sbjct: 527 AFGVLLYEMLAGQAPFEG 544
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 73 LSQLF-IGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
LS F + ++ GA S +YR K Q+ A+K+++ + ++ ++E+ +L
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--------KTVDKKIVRTEIGVL 102
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
RL HPNI++ + P ++ E ++ G L + +K YS I
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEA 160
Query: 190 MEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
+ YLH G++HRDLK D +K+ADFG S + K GT + APE
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE 220
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+++ Y +VD++S GI+ + L PF
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 115
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTP 174
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 113
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTP 172
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+L H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
+ R+ M +WM PE E +T K D +SFG++LWE+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+L H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 110
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTP 169
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 119 EQQFKSEVALLSRLFHPNIVQF---IAACKKPPVYCIITEYMSQGTLRMYLNK--KEPYS 173
+Q SEV LL L HPNIV++ I +Y I+ EY G L + K KE
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-IVMEYCEGGDLASVITKGTKERQY 107
Query: 174 LSTETVLRLALDISRGMEYLH--SQG---VIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
L E VLR+ ++ ++ H S G V+HRDLK VK+ DFG + +
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 229 QCRE-TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFA 287
+ K +GT +M+PE + Y K D++S G +L+EL + PF + + A
Sbjct: 168 HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
Query: 288 VAE 290
+ E
Sbjct: 228 IRE 230
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 110
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTP 169
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 110
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTP 169
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K SGA+ + + K + A + ++I + T EVA+L +L HPNI++
Sbjct: 28 KLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYLHSQGV 198
+ Y ++ E G L + ++ +S + +++ L G YLH +
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHNI 142
Query: 199 IHRDLKSXXXXXXD---DMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+HRDLK D +K+ DFG S + K +GT ++APE++++K Y
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK-YDE 201
Query: 256 KVDVYSFGIVLWELTTALLPFQGMT 280
K DV+S G++L+ L PF G T
Sbjct: 202 KCDVWSCGVILYILLCGYPPFGGQT 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + A + C + EY + G L +L+++ + TE R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFY 110
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE--TQCRETKGNMGTY 240
+I +EYLHS+ V++RD+K D +K+ DFG C E + K GT
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTP 169
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 81
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 82 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 139
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR-----WMAPEMIKE 250
+ IHRDL + VK+ DFG Q + M +R W APE +K
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-NDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 251 KPYTRKVDVYSFGIVLWELTT 271
+ ++ D + FG+ LWE+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R VAVK + E K+++ K E+ L HPNIV+F P
Sbjct: 35 ARLMRDKQANELVAVKYI-------ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--S 205
I+ EY S G L + +S E IS G+ Y H+ V HRDLK +
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-GVSYAHAMQVAHRDLKLEN 145
Query: 206 XXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYSFGI 264
R+K+ADFG S + K +GT ++APE++ +K Y KV DV+S G+
Sbjct: 146 TLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 265 VLWELTTALLPFQ 277
L+ + PF+
Sbjct: 206 TLYVMLVGAYPFE 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 72 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 129
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR-----WMAPEMIKE 250
+ IHRDL + VK+ DFG Q + M +R W APE +K
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ-NDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 251 KPYTRKVDVYSFGIVLWELTT 271
+ ++ D + FG+ LWE+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL---NKKEPYSLSTETVLR 181
E +L+++ IV A + C++ M+ G +R ++ ++ P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTY 240
A +S G+E+LH + +I+RDLK DD V+++D G + L+ +TKG GT
Sbjct: 295 TAQIVS-GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+MAPE++ + Y VD ++ G+ L+E+ A PF+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL---NKKEPYSLSTETVLR 181
E +L+++ IV A + C++ M+ G +R ++ ++ P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTY 240
A +S G+E+LH + +I+RDLK DD V+++D G + L+ +TKG GT
Sbjct: 295 TAQIVS-GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+MAPE++ + Y VD ++ G+ L+E+ A PF+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL---NKKEPYSLSTETVLR 181
E +L+++ IV A + C++ M+ G +R ++ ++ P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTY 240
A I G+E+LH + +I+RDLK DD V+++D G + L+ +TKG GT
Sbjct: 295 TA-QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+MAPE++ + Y VD ++ G+ L+E+ A PF+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 76 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 133
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEK 251
+ IHRDL + VK+ DFG Q + + + W APE +K +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 252 PYTRKVDVYSFGIVLWELTT 271
++ D + FG+ LWE+ T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 81 KFASGAHSRIYRG---IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---H 134
+ GA+ ++++ R VA+K VR+ Q E L EVA+L L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 135 PNIVQFIAAC-----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
PN+V+ C + ++ E++ Q L YL+K + TET+ + + RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK 249
+++LHS V+HRDLK ++K+ADFG + + + + T + APE++
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPV 282
+ Y VD++S G + E+ F+G + V
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 72 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 129
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEK 251
+ IHRDL + VK+ DFG Q + + + W APE +K +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 252 PYTRKVDVYSFGIVLWELTT 271
++ D + FG+ LWE+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 81
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 82 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 139
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEK 251
+ IHRDL + VK+ DFG Q + + + W APE +K +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 252 PYTRKVDVYSFGIVLWELTT 271
++ D + FG+ LWE+ T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYL---NKKEPYSLSTETVLR 181
E +L+++ IV A + C++ M+ G +R ++ ++ P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTY 240
A +S G+E+LH + +I+RDLK DD V+++D G + L+ +TKG GT
Sbjct: 295 TAQIVS-GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+MAPE++ + Y VD ++ G+ L+E+ A PF+
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 75
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 76 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 133
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEK 251
+ IHRDL + VK+ DFG Q + + + W APE +K +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 252 PYTRKVDVYSFGIVLWELTT 271
++ D + FG+ LWE+ T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 79 GNKFASGAHSRIY-------RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
G G ++ Y + ++ + V M+ P+Q +++ +E+A+
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQ--------KEKMSTEIAIHKS 82
Query: 132 LFHPNIVQFIAACKKPP-VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
L +P++V F + VY ++ + L ++ +K +R + +G+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGV 139
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIK 249
+YLH+ VIHRDLK DDM VK+ DFG + +E K GT ++APE++
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+K ++ +VD++S G +L+ L PF+
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 81 KFASGAHSRIYRGIYKQRA----VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
+ G + +G+Y+ R VA+K+++ + +T ++ E ++ +L +P
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-----EEMMREAQIMHQLDNPY 71
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYL-NKKEPYSLSTETVLRLALDISRGMEYLHS 195
IV+ I C+ + ++ E G L +L K+E +S V L +S GM+YL
Sbjct: 72 IVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSN--VAELLHQVSMGMKYLEE 128
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTY--RWMAPEMIKEK 251
+ +HRDL + + K++DFG S T + G + +W APE I +
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 252 PYTRKVDVYSFGIVLWE-LTTALLPFQGMT-PVQAAF 286
++ + DV+S+G+ +WE L+ P++ M P AF
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 81 KFASGAHSRIYRGIY-----KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
K G+ + RG + K +VAVK ++ P+ + + A F EV + L H
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
N+++ PP+ ++TE G+L L K + + L T+ R A+ ++ GM YL S
Sbjct: 72 NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLES 129
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE----TKGNMGTYRWMAPEMIKEK 251
+ IHRDL + VK+ DFG Q + + + W APE +K +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 252 PYTRKVDVYSFGIVLWELTT 271
++ D + FG+ LWE+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 81 KFASGAHSRIYRG---IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---H 134
+ GA+ ++++ R VA+K VR+ Q E L EVA+L L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 135 PNIVQFIAAC-----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
PN+V+ C + ++ E++ Q L YL+K + TET+ + + RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK 249
+++LHS V+HRDLK ++K+ADFG + + + + T + APE++
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPV 282
+ Y VD++S G + E+ F+G + V
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
A G +++ VAVK+ I + K Q + EV L + H NI+QFI
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQD-------KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 143 ACKKPPVYCI----ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ-- 196
A K+ + IT + +G+L +L +S + +A ++RG+ YLH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIP 142
Query: 197 --------GVIHRDLKSXXXXXXDDMRVKVADFGTSC---LETQCRETKGNMGTYRWMAP 245
+ HRD+KS +++ +ADFG + +T G +GT R+MAP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 246 EMIK-----EKPYTRKVDVYSFGIVLWELTT 271
E+++ ++ ++D+Y+ G+VLWEL +
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 81 KFASGAHSRIYRG---IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF---H 134
+ GA+ ++++ R VA+K VR+ Q E L EVA+L L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLST--IREVAVLRHLETFEH 73
Query: 135 PNIVQFIAAC-----KKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
PN+V+ C + ++ E++ Q L YL+K + TET+ + + RG
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK 249
+++LHS V+HRDLK ++K+ADFG + + + + T + APE++
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPV 282
+ Y VD++S G + E+ F+G + V
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 94 IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-VYCI 152
++ + V M+ P+Q +++ +E+A+ L +P++V F + VY +
Sbjct: 69 VFAGKVVPKSMLLKPHQ--------KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 153 ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD 212
+ + L ++ +K +R + +G++YLH+ VIHRDLK D
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 213 DMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
DM VK+ DFG + +E K GT ++APE++ +K ++ +VD++S G +L+ L
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
Query: 272 ALLPFQ 277
PF+
Sbjct: 238 GKPPFE 243
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
+ R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLA 183
EV LL +L HPNI++ + + ++ E + G L +++K + ++R
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 184 LDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
L G+ Y+H ++HRDLK D +++ DFG S ++ K +GT
Sbjct: 136 L---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE++ Y K DV+S G++L+ L + PF G
Sbjct: 193 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLA 183
EV LL +L HPNI++ + + ++ E + G L +++K + ++R
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 158
Query: 184 LDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
L G+ Y+H ++HRDLK D +++ DFG S ++ K +GT
Sbjct: 159 L---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 215
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE++ Y K DV+S G++L+ L + PF G
Sbjct: 216 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 70 TADLSQLFIGNK-FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVAL 128
T ++ + FI + SGA S ++ + KQR K+ + I+++ A + ++E+A+
Sbjct: 4 TTNIRKTFIFMEVLGSGAFSEVF--LVKQRLTG-KLFAL-KCIKKSPAFRDSSLENEIAV 59
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD-IS 187
L ++ H NIV + Y ++ + +S G L + ++ Y TE L + +
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVY---TEKDASLVIQQVL 116
Query: 188 RGMEYLHSQGVIHRDLKSXXX---XXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMA 244
++YLH G++HRDLK ++ ++ + DFG S +E Q GT ++A
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVA 175
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
PE++ +KPY++ VD +S G++ + L PF
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLA 183
EV LL +L HPNI++ + + ++ E + G L +++K + ++R
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 159
Query: 184 LDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
L G+ Y+H ++HRDLK D +++ DFG S ++ K +GT
Sbjct: 160 L---SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 216
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE++ Y K DV+S G++L+ L + PF G
Sbjct: 217 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 94 IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-VYCI 152
++ + V M+ P+Q +++ +E+A+ L +P++V F + VY +
Sbjct: 69 VFAGKVVPKSMLLKPHQ--------KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 153 ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD 212
+ + L ++ +K +R + +G++YLH+ VIHRDLK D
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 213 DMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
DM VK+ DFG + +E K GT ++APE++ +K ++ +VD++S G +L+ L
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
Query: 272 ALLPFQ 277
PF+
Sbjct: 238 GKPPFE 243
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y KQ + + V +Q+E + +E Q + E+ + S L HPN
Sbjct: 19 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPN 76
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ ++ E+ +G L L K + +++ + Y H +
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHER 134
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R + GT ++ PEMI+ K + K
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIEGKTHDEK 193
Query: 257 VDVYSFGIVLWELTTALLPF 276
VD++ G++ +E + PF
Sbjct: 194 VDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
IG G +Y KQ + + V +Q+E + +E Q + E+ + S L HPN
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ ++ E+ +G L L K + +++ + Y H +
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHER 133
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R + GT ++ PEMI+ K + K
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIEGKTHDEK 192
Query: 257 VDVYSFGIVLWELTTALLPF 276
VD++ G++ +E + PF
Sbjct: 193 VDLWCAGVLCYEFLVGMPPF 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 94 IYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-VYCI 152
++ + V M+ P+Q +++ +E+A+ L +P++V F + VY +
Sbjct: 69 VFAGKVVPKSMLLKPHQ--------KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVV 120
Query: 153 ITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXD 212
+ + L ++ +K +R + +G++YLH+ VIHRDLK D
Sbjct: 121 LEICRRRSLLELHKRRKAVTEPEARYFMRQTI---QGVQYLHNNRVIHRDLKLGNLFLND 177
Query: 213 DMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTT 271
DM VK+ DFG + +E K GT ++APE++ +K ++ +VD++S G +L+ L
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
Query: 272 ALLPFQ 277
PF+
Sbjct: 238 GKPPFE 243
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R VAVK + E K+++ K E+ L HPNIV+F P
Sbjct: 34 ARLMRDKQSNELVAVKYI-------ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 86
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--S 205
I+ EY S G L + +S E IS G+ Y H+ V HRDLK +
Sbjct: 87 THLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-GVSYCHAMQVCHRDLKLEN 144
Query: 206 XXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYSFGI 264
R+K+ DFG S + K +GT ++APE++ +K Y KV DV+S G+
Sbjct: 145 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
Query: 265 VLWELTTALLPFQ 277
L+ + PF+
Sbjct: 205 TLYVMLVGAYPFE 217
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 83 ASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
G S + R I ++ AVK+V + + + + K E ++ L HP+IV+
Sbjct: 35 GKGPFSVVRRCINRETGQQFAVKIVDV-AKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEP--YSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E+M L + K+ + S I + Y H +
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 153
Query: 199 IHRDLKSX---XXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYT 254
IHRD+K + VK+ FG + L G +GT +MAPE++K +PY
Sbjct: 154 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYG 213
Query: 255 RKVDVYSFGIVLWELTTALLPFQG 278
+ VDV+ G++L+ L + LPF G
Sbjct: 214 KPVDVWGCGVILFILLSGCLPFYG 237
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 83 ASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
G S + R I ++ AVK+V + + + + K E ++ L HP+IV+
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDV-AKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEP--YSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E+M L + K+ + S I + Y H +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 199 IHRDLKSX---XXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMAPEMIKEKPYT 254
IHRD+K + VK+ FG + L G +GT +MAPE++K +PY
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYG 211
Query: 255 RKVDVYSFGIVLWELTTALLPFQG 278
+ VDV+ G++L+ L + LPF G
Sbjct: 212 KPVDVWGCGVILFILLSGCLPFYG 235
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK-----KEPYS 173
E F E ++S+ H NIV+ I + I+ E M+ G L+ +L + +P S
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDL--KSXXXXXXDDMRV-KVADFGTS---CLE 227
L+ +L +A DI+ G +YL IHRD+ ++ RV K+ DFG +
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 214
Query: 228 TQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPF 276
R+ M +WM PE E +T K D +SFG++LWE+ + +P+
Sbjct: 215 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLA 183
EV LL +L HPNI++ + + ++ E + G L +++K + ++R
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 141
Query: 184 LDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
L G+ Y+H ++HRDLK D +++ DFG S ++ K +GT
Sbjct: 142 LS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 198
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE++ Y K DV+S G++L+ L + PF G
Sbjct: 199 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 25/189 (13%)
Query: 101 AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQG 160
A+K+++ I++ + K +ALL + P + Q + + + EY++ G
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDK--PPFLTQLHSCFQTVDRLYFVMEYVNGG 105
Query: 161 TLRMYLNK----KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV 216
L ++ + KEP ++ A +IS G+ +LH +G+I+RDLK + +
Sbjct: 106 DLMYHIQQVGKFKEPQAVF------YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHI 159
Query: 217 KVADFGTSCLETQCRE-------TKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
K+ADFG C+E T+ GT ++APE+I +PY + VD +++G++L+E+
Sbjct: 160 KIADFGM------CKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
Query: 270 TTALLPFQG 278
PF G
Sbjct: 214 LAGQPPFDG 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL-RMYLNKKEPYSLSTETVLRLA 183
EV LL +L HPNI + + + ++ E + G L +++K + ++R
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV 135
Query: 184 LDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTY 240
L G+ Y H ++HRDLK D +++ DFG S ++ K +GT
Sbjct: 136 L---SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA 192
Query: 241 RWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++APE++ Y K DV+S G++L+ L + PF G
Sbjct: 193 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 22/265 (8%)
Query: 29 LNSDMENLEKKRFDSLE-SWSMILDSENVETWEVSKEDQEEWTADLSQ--LFIGN-KFAS 84
LNSD E R S + M +D+ E+ E+ ++ L + L I + +
Sbjct: 287 LNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGC 346
Query: 85 GAHSRIYRGIYKQRA----VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
G + +G+Y+ R VA+K+++ + +T ++ E ++ +L +P IV+
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-----EEMMREAQIMHQLDNPYIVRL 401
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYL-NKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
I C+ + ++ E G L +L K+E + V L +S GM+YL + +
Sbjct: 402 IGVCQAEALM-LVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTY--RWMAPEMIKEKPYTR 255
HR+L + + K++DFG S T + G + +W APE I + ++
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 256 KVDVYSFGIVLWE-LTTALLPFQGM 279
+ DV+S+G+ +WE L+ P++ M
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
C++ M+ G L+ ++ + A +I G+E LH + +++RDLK
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 211 XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELT 270
D ++++D G + + + KG +GT +MAPE++K + YT D ++ G +L+E+
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 271 TALLPFQ 277
PFQ
Sbjct: 380 AGQSPFQ 386
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
C++ M+ G L+ ++ + A +I G+E LH + +++RDLK
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 211 XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELT 270
D ++++D G + + + KG +GT +MAPE++K + YT D ++ G +L+E+
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 271 TALLPFQ 277
PFQ
Sbjct: 380 AGQSPFQ 386
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 5 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 52
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 109
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 110 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 7 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 54
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 111
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA+ + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R + VAVK + E A +++ + E+ L HPNIV+F P
Sbjct: 36 ARLMRDKLTKELVAVKYI-------ERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP 88
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--S 205
II EY S G L Y S + + G+ Y HS + HRDLK +
Sbjct: 89 THLAIIMEYASGGEL--YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN 146
Query: 206 XXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYSFGI 264
R+K+ DFG S + K +GT ++APE++ + Y K+ DV+S G+
Sbjct: 147 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 265 VLWELTTALLPFQ 277
L+ + PF+
Sbjct: 207 TLYVMLVGAYPFE 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 28/178 (15%)
Query: 119 EQQFKSEVALLSR--LFHPNIVQFIAACKKPP----VYCIITEYMSQGTLRMYLNKKEPY 172
+Q ++SE + S + H N++QFIAA K+ +IT + +G+L YL
Sbjct: 51 KQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN--- 107
Query: 173 SLSTETVLRLALDISRGMEYLHSQ-----------GVIHRDLKSXXXXXXDDMRVKVADF 221
++ + +A +SRG+ YLH + HRD KS D+ +ADF
Sbjct: 108 IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADF 167
Query: 222 GTSCLETQCR---ETKGNMGTYRWMAPEMIK-----EKPYTRKVDVYSFGIVLWELTT 271
G + + +T G +GT R+MAPE+++ ++ ++D+Y+ G+VLWEL +
Sbjct: 168 GLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 93/179 (51%), Gaps = 8/179 (4%)
Query: 105 VRIPNQIEETRA-KLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL- 162
+++ +I +TR K +++ K+E++++++L H N++Q A + ++ EY+ G L
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
Query: 163 -RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--SXXXXXXDDMRVKVA 219
R+ E Y+L+ + I G+ ++H ++H DLK + D ++K+
Sbjct: 175 DRII---DESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKII 231
Query: 220 DFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
DFG + + K N GT ++APE++ + D++S G++ + L + L PF G
Sbjct: 232 DFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R VAVK + E K+ K E+ L HPNIV+F P
Sbjct: 35 ARLMRDKQSNELVAVKYI-------ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALD-ISRGMEYLHSQGVIHRDLK-- 204
I+ EY S G L + +S E R + G+ Y H+ V HRDLK
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFS---EDEARFFFQQLISGVSYCHAMQVCHRDLKLE 144
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYSFG 263
+ R+K+ DFG S + K +GT ++APE++ +K Y KV DV+S G
Sbjct: 145 NTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 264 IVLWELTTALLPFQ 277
+ L+ + PF+
Sbjct: 205 VTLYVMLVGAYPFE 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 103 KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL 162
+MV I + T + K+E+ L L H +I Q + ++ EY G L
Sbjct: 36 EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95
Query: 163 RMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG 222
Y+ ++ LS E + I + Y+HSQG HRDLK + ++K+ DFG
Sbjct: 96 FDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG 153
Query: 223 TSCLETQCRETKGN--------MGTYRWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTAL 273
C + KGN G+ + APE+I+ K Y + DV+S GI+L+ L
Sbjct: 154 L------CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 274 LPF 276
LPF
Sbjct: 208 LPF 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 81 KFASGAHSRIYRGIYKQ-RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K G + +Y+ Q R VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKELHHPNIVS 83
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
I ++ E+M + L+ L++ + L + + RG+ + H ++
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKV 257
HRDLK D +K+ADFG + R + T + AP+ ++ K Y+ V
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 258 DVYSFGIVLWELTTALLPFQGMT 280
D++S G + E+ T F G+T
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 81 KFASGAHSRIYRGIYKQ-RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K G + +Y+ Q R VA+K +R+ + E + E++LL L HPNIV
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE----GIPSTAIREISLLKELHHPNIVS 83
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
I ++ E+M + L+ L++ + L + + RG+ + H ++
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKV 257
HRDLK D +K+ADFG + R + T + AP+ ++ K Y+ V
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV 201
Query: 258 DVYSFGIVLWELTTALLPFQGMT 280
D++S G + E+ T F G+T
Sbjct: 202 DIWSIGCIFAEMITGKPLFPGVT 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKS 124
E+W DL Q GA + + + + AVAVK+V + ++ + K
Sbjct: 6 EDW--DLVQ-----TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-----CPENIKK 53
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEP-YSLSTETVLRLA 183
E+ + L H N+V+F ++ + + EY S G L ++ EP + R
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFF 110
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFG-TSCLETQCRETKGN--MGTY 240
+ G+ YLH G+ HRD+K + +K++DFG + RE N GT
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 241 RWMAPEMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
++APE++K + + VDV+S GIVL + LP+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 72 DLSQLFIGNKFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
D QLF + GA S + R + K + A K++ ++ A+ Q+ + E +
Sbjct: 31 DDYQLF--EELGKGAFSVVRRCVKKTPTQEYAAKII----NTKKLSARDHQKLEREARIC 84
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
L HPNIV+ + + + ++ + ++ G L + +E YS + + I
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--HCIHQILES 142
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETK--GNMGTYRWMA 244
+ ++H ++HRDLK + VK+ADFG + +E Q + G GT +++
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLS 201
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
PE++++ PY + VD+++ G++L+ L PF
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R VAVK + E K+++ K E+ L HPNIV+F P
Sbjct: 35 ARLMRDKQSNELVAVKYI-------ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--S 205
I+ EY S G L + +S E IS G+ Y H+ V HRDLK +
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-GVSYCHAMQVCHRDLKLEN 145
Query: 206 XXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYSFGI 264
R+K+ FG S + K +GT ++APE++ +K Y KV DV+S G+
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 265 VLWELTTALLPFQ 277
L+ + PF+
Sbjct: 206 TLYVMLVGAYPFE 218
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 88 SRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKP 147
+R+ R VAVK + E K+++ K E+ L HPNIV+F P
Sbjct: 35 ARLMRDKQSNELVAVKYI-------ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTP 87
Query: 148 PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK--S 205
I+ EY S G L + +S E IS G+ Y H+ V HRDLK +
Sbjct: 88 THLAIVMEYASGGELFERICNAGRFS-EDEARFFFQQLIS-GVSYCHAMQVCHRDLKLEN 145
Query: 206 XXXXXXDDMRVKVADFG---TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKV-DVYS 261
R+K+ FG +S L +Q ++T +GT ++APE++ +K Y KV DV+S
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLLKKEYDGKVADVWS 202
Query: 262 FGIVLWELTTALLPFQ 277
G+ L+ + PF+
Sbjct: 203 CGVTLYVMLVGAYPFE 218
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 6/200 (3%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKM-VRIPNQIEETRAKLEQQFKSEVALLSRLFHPN 136
I G +Y KQ + + V +Q+E + +E Q + E+ + S L HPN
Sbjct: 18 IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPN 75
Query: 137 IVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
I++ ++ E+ +G L L K + +++ + Y H +
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHER 133
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRK 256
VIHRD+K +K+ADFG S R + GT ++ PEMI+ K + K
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIEGKTHDEK 192
Query: 257 VDVYSFGIVLWELTTALLPF 276
VD++ G++ +E + PF
Sbjct: 193 VDLWCAGVLCYEFLVGMPPF 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
A+ Q+ + E + L HPNIV+ + + + +I + ++ G L + +E YS +
Sbjct: 62 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 121
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSC-LETQCR 231
+ I + + H GV+HRDLK ++ VK+ADFG + +E + +
Sbjct: 122 DAS--HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 232 ETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G GT +++PE++++ PY + VD+++ G++L+ L PF
Sbjct: 180 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEY 192
HP + Q + P + E+++ G L ++ K + E R A +I + +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARARFYAAEIISALMF 139
Query: 193 LHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR--ETKGNMGTYRWMAPEMIKE 250
LH +G+I+RDLK + K+ADFG C E C T GT ++APE+++E
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGM-CKEGICNGVTTATFCGTPDYIAPEILQE 198
Query: 251 KPYTRKVDVYSFGIVLWELTTALLPFQ 277
Y VD ++ G++L+E+ PF+
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 92 RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAA-------- 143
R R A+K +R T KL SEV LL+ L H +V++ AA
Sbjct: 26 RNALDSRYYAIKKIR------HTEEKLSTIL-SEVMLLASLNHQYVVRYYAAWLERRNFV 78
Query: 144 -----CKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
KK I EY GTL ++ E + + RL I + Y+HSQG+
Sbjct: 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--------CLETQCRETKGN-------MGTYRWM 243
IHRDLK + VK+ DFG + L+ + G+ +GT ++
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 244 APEMIK-EKPYTRKVDVYSFGIVLWELTTALLPFQ-GMTPVQ 283
A E++ Y K+D+YS GI+ +E+ + PF GM V
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVN 236
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CL 226
KEP ++ E ++ + ++RGME+L S+ IHRDL + ++ VK+ DFG +
Sbjct: 193 KEP--ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 227 ETQCRETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
+ KG+ +WMAPE I +K Y+ K DV+S+G++LWE+ + P+ G+
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ + GI K R VAVKM++ E +A
Sbjct: 18 DASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAAC-KKPPVYCIITEYMSQGTLRMYL-NKKEPYSL 174
+ +E+ +L+ + H N+V + AC K+ +I EY G L YL +K++ + L
Sbjct: 78 M-----TELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFL 132
Query: 175 STETVLRL 182
+ + L +
Sbjct: 133 NKDAALHM 140
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 72
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 191
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + + + C + EY + G L +L+++ +S E R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS---EDRARFY 253
Query: 183 ALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-------K 234
+I ++YLHS+ V++RDLK D +K+ DFG C+E K
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMK 307
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + + + C + EY + G L +L+++ +S E R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS---EDRARFY 256
Query: 183 ALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-------K 234
+I ++YLHS+ V++RDLK D +K+ DFG C+E K
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMK 310
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 180 LRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK----- 234
L + + I+ +E+LHS+G++HRDLK D VKV DFG Q E +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 235 --------GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
G +GT +M+PE I Y+ KVD++S G++L+EL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + + + C + EY + G L +L+++ +S E R
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS---EDRARFY 113
Query: 183 ALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-------K 234
+I ++YLHS+ V++RDLK D +K+ DFG C+E K
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMK 167
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + + + C + EY + G L +L+++ +S E R
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS---EDRARFY 114
Query: 183 ALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-------K 234
+I ++YLHS+ V++RDLK D +K+ DFG C+E K
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMK 168
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 74 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 133
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L HP + + + C + EY + G L +L+++ +S E R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS---EDRARFY 115
Query: 183 ALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET-------K 234
+I ++YLHS+ V++RDLK D +K+ DFG C+E K
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMK 169
Query: 235 GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE++++ Y R VD + G+V++E+ LPF
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 64 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 68 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 71 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 72 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 131
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 63 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 122
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 72 DLSQLFIGNKFASGAHSRIYR--GIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
D QLF + GA S + R I + A K++ ++ A+ Q+ + E +
Sbjct: 4 DEYQLF--EELGKGAFSVVRRCMKIPTGQEYAAKII----NTKKLSARDHQKLEREARIC 57
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
L HPNIV+ + + + ++ + ++ G L + +E YS + + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--HCIQQILES 115
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETK--GNMGTYRWMA 244
+ + H G++HRDLK + VK+ADFG + +E Q + G GT +++
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
PE++++ PY + VD+++ G++L+ L PF
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 145
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 64 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 72 DLSQLFIGNKFASGAHSRIYR--GIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
D QLF + GA S + R I + A K++ ++ A+ Q+ + E +
Sbjct: 4 DEYQLF--EELGKGAFSVVRRCMKIPTGQEYAAKII----NTKKLSARDHQKLEREARIC 57
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
L HPNIV+ + + + ++ + ++ G L + +E YS + + I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--HCIQQILES 115
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRETK--GNMGTYRWMA 244
+ + H G++HRDLK + VK+ADFG + +E Q + G GT +++
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
PE++++ PY + VD+++ G++L+ L PF
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EYM G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KVADFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EYM G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KVADFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 66
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 66
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 66
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 66
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 126 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 67
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 67
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 69
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 188
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 72
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 132 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 191
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 67
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 127 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 69
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 129 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 188
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 65
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
A+ Q+ + E + L HPNIV+ + + + +I + ++ G L + +E YS +
Sbjct: 51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 110
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSC-LETQCR 231
+ I + + H GV+HR+LK ++ VK+ADFG + +E + +
Sbjct: 111 DAS--HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 232 ETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G GT +++PE++++ PY + VD+++ G++L+ L PF
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 66
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++S L+ +++ + + + +G+ + HS V
Sbjct: 67 KLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 80 NKFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNI 137
+K G ++ +Y+G K VA+K +R+ ++ + EV+LL L H NI
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-----EVSLLKDLKHANI 62
Query: 138 VQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQG 197
V ++ EY+ + L+ YL+ ++ V + RG+ Y H Q
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI-INMHNVKLFLFQLLRGLAYCHRQK 120
Query: 198 VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE--MIKEKPYTR 255
V+HRDLK + +K+ADFG + ++ +T N W P ++ Y+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 256 KVDVYSFGIVLWELTTALLPFQGMT 280
++D++ G + +E+ T F G T
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
Query: 78 IGNKFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP 135
I + SGA ++R + K R K + P +++ K +E++++++L HP
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK------NEISIMNQLHHP 108
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
++ A + +I E++S G L + E Y +S V+ G++++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 196 QGVIHRDLKSXXX--XXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPY 253
++H D+K VK+ DFG + K T + APE++ +P
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPV 227
Query: 254 TRKVDVYSFGIVLWELTTALLPFQG 278
D+++ G++ + L + L PF G
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++S L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 125 EVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
E+ +L R HPNI+ ++TE M G L + +++ +S + +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMG- 238
I++ +EYLH+QGV+HRDLK D+ +++ DFG Q R G +
Sbjct: 125 --ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMT 179
Query: 239 ---TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
T ++APE+++ + Y D++S G++L+ + T PF
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++ Q L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 67
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++S L+ +++ + + + +G+ + HS V
Sbjct: 68 KLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 9/212 (4%)
Query: 81 KFASGAHSRIYRGIYK--QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ K VA+K +R+ + E + + E++LL L HPNIV
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR----EISLLKELNHPNIV 68
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + ++ E++S L+ +++ + + + +G+ + HS V
Sbjct: 69 KLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRK 256
+HRDLK + +K+ADFG + R + T + APE ++ K Y+
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 257 VDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
VD++S G + E+ T F G + + F +
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 14 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 68
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 69 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 126
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK + ++V DFG + + K
Sbjct: 127 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFA------KRVK 179
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 180 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 63 KEDQEEWTADLSQLFIG-NKFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLE 119
K+D + +L + ++ SGA+ + I K+ VA+K + P Q E
Sbjct: 12 KQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE----IFA 67
Query: 120 QQFKSEVALLSRLFHPNIVQ----FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
++ E+ LL + H N++ F A Y Y+ ++ L K S
Sbjct: 68 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF---YLVMPFMQTDLQKIMGLKFS 124
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG 235
E + L + +G++Y+HS GV+HRDLK +D +K+ DFG + R
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA------RHADA 178
Query: 236 NMGTY---RWM-APEMIKE-KPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE+I Y + VD++S G ++ E+ T F+G
Sbjct: 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 126 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 130 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 189
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 63 KEDQEEWTADLSQLFIG-NKFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLE 119
K+D + +L + ++ SGA+ + I K+ VA+K + P Q E
Sbjct: 30 KQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE----IFA 85
Query: 120 QQFKSEVALLSRLFHPNIVQ----FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
++ E+ LL + H N++ F A Y Y+ ++ L K S
Sbjct: 86 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF---YLVMPFMQTDLQKIMGMEFS 142
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG 235
E + L + +G++Y+HS GV+HRDLK +D +K+ DFG + R
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA------RHADA 196
Query: 236 NMGTY---RWM-APEMIKE-KPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE+I Y + VD++S G ++ E+ T F+G
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY------S 173
Q+ E+ +L R H NI+ + P + E M L +L + Y
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTI-----EQMKDVYLVTHLMGADLYKLLKTQH 140
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
LS + + I RG++Y+HS V+HRDLK +K+ DFG + + +
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KVADFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
K G + +Y+ K V + +I +++ + E++LL L HPNIV+
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ ++ E++ Q L+ +++ + + + +G+ + HS V+H
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKVD 258
RDLK + +K+ADFG + R + T + APE ++ K Y+ VD
Sbjct: 127 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 259 VYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
++S G + E+ T F G + + F +
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 5/210 (2%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
K G + +Y+ K V + +I +++ + E++LL L HPNIV+
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKI--RLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIH 200
+ ++ E++ Q L+ +++ + + + +G+ + HS V+H
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 201 RDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKVD 258
RDLK + +K+ADFG + R + T + APE ++ K Y+ VD
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 259 VYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
++S G + E+ T F G + + F +
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 183
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L KE
Sbjct: 52 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAK 109
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ E + ++++ + RG+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 166
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +MAPE ++ Y+ + D++S G+ L EL P
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 148 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 207
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 208 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 28 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 82
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 140
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 141 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 193
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSC-LETQCRETKGNMGTYRWMA 244
I G +YLH VIHRDLK +D+ VK+ DFG + +E K GT ++A
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 209
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
PE++ +K ++ +VDV+S G +++ L PF+
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG 238
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 239 TY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y RW APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GN----MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG--- 235
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 236 -NMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ T + APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H NI+ + P + + Y+ Q + L K + LS +
Sbjct: 71 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG--- 235
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 236 -NMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ T + APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG CR T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL------CRHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 92 RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAA-------- 143
R R A+K +R T KL SEV LL+ L H +V++ AA
Sbjct: 26 RNALDSRYYAIKKIR------HTEEKLSTIL-SEVMLLASLNHQYVVRYYAAWLERRNFV 78
Query: 144 -----CKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
KK I EY TL ++ E + + RL I + Y+HSQG+
Sbjct: 79 KPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--------CLETQCRETKGN-------MGTYRWM 243
IHRDLK + VK+ DFG + L+ + G+ +GT ++
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 244 APEMIK-EKPYTRKVDVYSFGIVLWELTTALLPFQ-GMTPVQ 283
A E++ Y K+D+YS GI+ +E+ + PF GM V
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVN 236
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 48 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 102
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 160
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 161 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 213
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 214 GATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 115 RAKLEQQFKSE-VALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS 173
+ K E+ SE LL + HP +V + + + +Y++ G L +L ++ +
Sbjct: 78 KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF- 136
Query: 174 LSTETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE 232
E R A +I+ + YLHS +++RDLK + + DFG +
Sbjct: 137 --LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194
Query: 233 TKGNM-GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
T GT ++APE++ ++PY R VD + G VL+E+ L PF
Sbjct: 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 82 FASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL-FHPNIV 138
G+ S + ++K+ +A AVK++ ++E + E+ L HPNIV
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---------KRMEANTQKEITALKLCEGHPNIV 69
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ ++ E ++ G L + KK+ +S + + + L + ++H GV
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL--VSAVSHMHDVGV 127
Query: 199 IHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRET-KGNMGTYRWMAPEMIKEKPYT 254
+HRDLK D++ +K+ DFG + L+ + K T + APE++ + Y
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 255 RKVDVYSFGIVLWELTTALLPFQ 277
D++S G++L+ + + +PFQ
Sbjct: 188 ESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYL 193
P IV A P I + M+ G L +L++ + + +E +R A +I G+E++
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHM 307
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK-P 252
H++ V++RDLK + V+++D G +C + ++ ++GT+ +MAPE++++
Sbjct: 308 HNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKGVA 366
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQ 277
Y D +S G +L++L PF+
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSPFR 391
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 142 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 189
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYL 193
P IV A P I + M+ G L +L++ + + +E +R A +I G+E++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHM 308
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK-P 252
H++ V++RDLK + V+++D G +C + ++ ++GT+ +MAPE++++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKGVA 367
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQ 277
Y D +S G +L++L PF+
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 142 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 189
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 22 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 76
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 77 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 136
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 137 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 184
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 185 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP 141
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 142 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 189
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCR 231
L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 232 ETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 72
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKK 169
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 73 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSK 121
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 125 EVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
E+ +L R HPNI+ ++TE M G L L+K +E
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFV 126
Query: 184 LD-ISRGMEYLHSQGVIHRDLKSXXXXXXDDMR----VKVADFGTSCLETQCRETKGNMG 238
L I + +EYLHSQGV+HRDLK D+ +++ DFG Q R G +
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLM 183
Query: 239 ----TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
T ++APE++K + Y D++S GI+L+ + PF
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCR 231
L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 232 ETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 297
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 11 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 70
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKK 169
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 71 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSK 119
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYL 193
P IV A P I + M+ G L +L++ + + +E +R A +I G+E++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHM 308
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK-P 252
H++ V++RDLK + V+++D G +C + ++ ++GT+ +MAPE++++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKGVA 367
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQ 277
Y D +S G +L++L PF+
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 142 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 189
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYL 193
P IV A P I + M+ G L +L++ + + +E +R A +I G+E++
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHM 308
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK-P 252
H++ V++RDLK + V+++D G +C + ++ ++GT+ +MAPE++++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGHVRISDLGLAC-DFSKKKPHASVGTHGYMAPEVLQKGVA 367
Query: 253 YTRKVDVYSFGIVLWELTTALLPFQ 277
Y D +S G +L++L PF+
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFR 392
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 48 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 102
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY++ G + +L + EP
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 162
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 163 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 210
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 28 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 82
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY G + +L + +S
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS-- 140
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK +KV DFG + + K
Sbjct: 141 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVK 193
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCR 231
L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 232 ETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 304
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKK 169
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 78 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSK 126
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++++ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCR 231
L+ E ++ + +++GME+L S+ IHRDL + + VK+ DFG + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 232 ETKGNMG-TYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL-TTALLPFQGM 279
KG+ +WMAPE I ++ YT + DV+SFG++LWE+ + P+ G+
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 65 DQEEWTADLSQLFIGNKFASGAHSRIYR----GIYKQ---RAVAVKMVRIPNQIEETRAK 117
D +W +L +G GA ++ GI K R VAVKM++ E RA
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 79
Query: 118 LEQQFKSEVALLSRL-FHPNIVQFIAACKKP--PVYCIITEYMSQGTLRMYLNKK 169
+ SE+ +L + H N+V + AC KP P+ +I E+ G L YL K
Sbjct: 80 M-----SELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSK 128
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFK 123
E+ + TA L Q +G+ R+ +K+ M +I ++ + + K +
Sbjct: 31 ENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAM-KILDKQKVVKLKQIEHTL 89
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L + P +V+ + K ++ EY+ G + +L + +S E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFY 146
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----G 238
A I EYLHS +I+RDLK ++V DFG + + KG G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 239 TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
T ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 59 WEVSKEDQEEWTADLSQLFIGNK-FASGAHSRIYRGIYKQ--RAVAVKMV-RIPNQIEET 114
++++ +DQ + L +I +K SGA + ++ + VA++++ + I
Sbjct: 133 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 115 R-AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEP 171
R A ++E+ +L +L HP I++ I Y I+ E M G L ++ NK+
Sbjct: 193 READPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR-- 249
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLET 228
L T + ++YLH G+IHRDLK +D +K+ DFG S +
Sbjct: 250 --LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 307
Query: 229 QCRETKGNMGTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 125 EVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
E+ +L R HPNI+ ++TE M G L L+K +E
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL---LDKILRQKFFSEREASFV 126
Query: 184 LD-ISRGMEYLHSQGVIHRDLKSXXXXXXDDMR----VKVADFGTSCLETQCRETKGNMG 238
L I + +EYLHSQGV+HRDLK D+ +++ DFG Q R G +
Sbjct: 127 LHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLM 183
Query: 239 ----TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
T ++APE++K + Y D++S GI+L+ + PF
Sbjct: 184 TPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 125 EVALLSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLA 183
E+ +L R HPNI+ ++TE G L + +++ +S + +
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT 124
Query: 184 LDISRGMEYLHSQGVIHRDLKSXXXXXXDDM----RVKVADFGTSCLETQCRETKGNMG- 238
I++ +EYLH+QGV+HRDLK D+ +++ DFG Q R G +
Sbjct: 125 --ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXT 179
Query: 239 ---TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
T ++APE+++ + Y D++S G++L+ T PF
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFK 123
E+ + TA L Q +G+ R+ +K+ M +I ++ + + K +
Sbjct: 31 ENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAM-KILDKQKVVKLKQIEHTL 89
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L + P +V+ + K ++ EY+ G + +L + +S E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFY 146
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----G 238
A I EYLHS +I+RDLK ++V DFG + + KG G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 239 TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
T ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 64 EDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFK 123
E+ + TA L Q +G+ R+ +K+ M +I ++ + + K +
Sbjct: 31 ENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAM-KILDKQKVVKLKQIEHTL 89
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L + P +V+ + K ++ EY+ G + +L + +S E R
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFY 146
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----G 238
A I EYLHS +I+RDLK ++V DFG + + KG G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCG 200
Query: 239 TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
T ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 59 WEVSKEDQEEWTADLSQLFIGNK-FASGAHSRIYRGIYKQ--RAVAVKMV-RIPNQIEET 114
++++ +DQ + L +I +K SGA + ++ + VA++++ + I
Sbjct: 119 FDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 178
Query: 115 R-AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEP 171
R A ++E+ +L +L HP I++ I Y I+ E M G L ++ NK+
Sbjct: 179 READPALNVETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR-- 235
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLET 228
L T + ++YLH G+IHRDLK +D +K+ DFG S +
Sbjct: 236 --LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 293
Query: 229 QCRETKGNMGTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ + GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR-------AKLEQQFKSEVALLSRLFHP 135
+SG++ + G+ + V + R+ N + + R + L ++ E+ LL+ HP
Sbjct: 31 SSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 136 NIV---QFIAACKKPPVY--CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
NI+ ++P ++ ++TE M ++ +++ +S + + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR--IVISPQHIQYFMYHILLGL 147
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWM-APEMIK 249
LH GV+HRDL D+ + + DF + E K + T+RW APE++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLA-REDTADANKTHYVTHRWYRAPELVM 206
Query: 250 E-KPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ K +T+ VD++S G V+ E+ F+G T
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR-------AKLEQQFKSEVALLSRLFHP 135
+SG++ + G+ + V + R+ N + + R + L ++ E+ LL+ HP
Sbjct: 31 SSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 136 NIV---QFIAACKKPPVY--CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGM 190
NI+ ++P ++ ++TE M ++ +++ +S + + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR--IVISPQHIQYFMYHILLGL 147
Query: 191 EYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWM-APEMIK 249
LH GV+HRDL D+ + + DF + E K + T+RW APE++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLA-REDTADANKTHYVTHRWYRAPELVM 206
Query: 250 E-KPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
+ K +T+ VD++S G V+ E+ F+G T
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 119 EQQFKSEVALLSRLFHPNIVQFIAAC---KKPPVYCIITEYMSQGTLRMY---LNKKEPY 172
E K E+ LL RL H N++Q + +K +Y ++ EY G M K+ P
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY-MVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 173 SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS------CL 226
+ +L G+EYLHSQG++H+D+K +K++ G +
Sbjct: 109 CQAHGYFCQLI----DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164
Query: 227 ETQCRETKGNMGTYRWMAPEMIK--EKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ CR ++G+ + PE+ + KVD++S G+ L+ +TT L PF+G
Sbjct: 165 DDTCRTSQGSPA---FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT +APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 20 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 74
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY+ G + +L + +S
Sbjct: 75 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-- 132
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 133 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 185
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 186 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 28 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 82
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY+ G + +L + +S
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-- 140
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 141 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 193
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 28 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 82
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY+ G + +L + +S
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-- 140
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 141 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 193
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 28 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 82
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY+ G + +L + +S
Sbjct: 83 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-- 140
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 141 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 193
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 83 ASGAHSRI---YRGIYKQRAVAVKMVRIPNQ--IEETRAKLEQQFKSEVALLSRLFHPNI 137
SGA+ + Y +Q+ VAVK + P Q I R E+ LL L H N+
Sbjct: 37 GSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 89
Query: 138 VQFIAACKKPPVYCIITE-YMSQGTLRMYLNK-KEPYSLSTETVLRLALDISRGMEYLHS 195
+ + +E Y+ + LN + +LS E V L + RG++Y+HS
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE-MIKEKPYT 254
G+IHRDLK +D +++ DFG + E G + T + APE M+ Y
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 255 RKVDVYSFGIVLWELTTALLPFQG 278
+ VD++S G ++ EL F G
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPG 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY++ G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 48 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 102
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY+ G + +L + +S
Sbjct: 103 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS-- 160
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 161 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 213
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQ---GTLRMYLNKKEPYSLSTETVLR 181
E+ LL +L H N+V + CKK + ++ E++ L ++ P L + V +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELF-----PNGLDYQVVQK 128
Query: 182 LALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR 241
I G+ + HS +IHRD+K VK+ DFG + E + R
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 242 WM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
W APE ++ + Y + VDV++ G ++ E+ F G + + + +
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISRGMEYL 193
P +V+ + K ++ EY G + +L + +S E R A I EYL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFS---EPHARFYAAQIVLTFEYL 158
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMAPEMIK 249
HS +I+RDLK +KVADFG + + KG GT ++APE+I
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFA------KRVKGRTWXLCGTPEYLAPEIIL 212
Query: 250 EKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
K Y + VD ++ G++++E+ PF P+Q
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KV DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 27 LKKWETPSQN----TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAM-KILDKQKVVK 81
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
K + +E +L + P +V+ + K ++ EY++ G + +L + +S
Sbjct: 82 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS-- 139
Query: 176 TETVLRL-ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
E R A I EYLHS +I+RDLK ++V DFG + + K
Sbjct: 140 -EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVK 192
Query: 235 GNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
G GT ++AP +I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 173 SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE 232
+LS E V L + RG++Y+HS G+IHRDLK +D +++ DFG + E
Sbjct: 119 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA--RQADEE 176
Query: 233 TKGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL F G
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVL 180
++E+ +L +L HP I++ I Y I+ E M G L ++ NK+ L T
Sbjct: 63 ETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCK 117
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNM 237
+ ++YLH G+IHRDLK +D +K+ DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 238 GTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 173 SLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE 232
+LS E V L + RG++Y+HS G+IHRDLK +D +++ DFG + E
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA--RQADEE 184
Query: 233 TKGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL F G
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPG 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVL 180
++E+ +L +L HP I++ I Y I+ E M G L ++ NK+ L T
Sbjct: 63 ETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCK 117
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNM 237
+ ++YLH G+IHRDLK +D +K+ DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 238 GTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVL 180
++E+ +L +L HP I++ I Y I+ E M G L ++ NK+ L T
Sbjct: 63 ETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCK 117
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNM 237
+ ++YLH G+IHRDLK +D +K+ DFG S + + +
Sbjct: 118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 238 GTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP +V + + + EY++ G L ++ ++ L E + +IS + YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYL 169
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKP 252
H +G+I+RDLK + +K+ D+G + +T GT ++APE+++ +
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED 229
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y VD ++ G++++E+ PF
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVL 180
++E+ +L +L HP I++ I Y I+ E M G L ++ NK+ L T
Sbjct: 62 ETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCK 116
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNM 237
+ ++YLH G+IHRDLK +D +K+ DFG S + + +
Sbjct: 117 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 238 GTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 45/246 (18%)
Query: 75 QLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFH 134
Q+ + + G + ++ G ++ VAVK+ + R ++E+ + H
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFR-------ETEIYQTVLMRH 90
Query: 135 PNIVQFIAACKKPP-----VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
NI+ FIAA K +Y +IT+Y G+L YL +L +++L+LA G
Sbjct: 91 ENILGFIAADIKGTGSWTQLY-LITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSG 146
Query: 190 MEYLHSQ--------GVIHRDLKSXXXXXXDDMRVKVADFGTSC---LETQCRETKGN-- 236
+ +LH++ + HRDLKS + +AD G + +T + N
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 237 MGTYRWMAPEMIKEKPYTRK------VDVYSFGIVLWELTTAL----------LPFQGMT 280
+GT R+M PE++ E D+YSFG++LWE+ LP+ +
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266
Query: 281 PVQAAF 286
P ++
Sbjct: 267 PSDPSY 272
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 123 KSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTL--RMYLNKKEPYSLSTETVL 180
++E+ +L +L HP I++ I Y I+ E M G L ++ NK+ L T
Sbjct: 69 ETEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCK 123
Query: 181 RLALDISRGMEYLHSQGVIHRDLKSXX---XXXXDDMRVKVADFGTSCLETQCRETKGNM 237
+ ++YLH G+IHRDLK +D +K+ DFG S + + +
Sbjct: 124 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 238 GTYRWMAPEM---IKEKPYTRKVDVYSFGIVLWELTTALLPF 276
GT ++APE+ + Y R VD +S G++L+ + PF
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP +V + + + EY++ G L ++ ++ L E + +IS + YL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYL 137
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRE-------TKGNMGTYRWMAPE 246
H +G+I+RDLK + +K+ D+G C+E T GT ++APE
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
+++ + Y VD ++ G++++E+ PF
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 153
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCGTPEYLA 207
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 37 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 81
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 138
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWTLCGTPEYLA 192
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L + P +V+ + K ++ EY G + +L + +S E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFY 146
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----G 238
A I EYLHS +I+RDLK +KV DFG + + KG G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA------KRVKGRTWXLCG 200
Query: 239 TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
T ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP +V + + + EY++ G L ++ ++ L E + +IS + YL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYL 122
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKP 252
H +G+I+RDLK + +K+ D+G + +T GT ++APE+++ +
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y VD ++ G++++E+ PF
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 56 VETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETR 115
++ WE ++ TA L Q +G+ R+ +K+ M +I ++ + +
Sbjct: 20 LKKWESPAQN----TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAM-KILDKQKVVK 74
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEP 171
K + +E +L + P +V+ + K ++ EY+ G + +L + EP
Sbjct: 75 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 134
Query: 172 YSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
++ A I EYLHS +I+RDLK ++V DFG + +
Sbjct: 135 HARF------YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------K 182
Query: 232 ETKGNM----GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
KG GT ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 153
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 207
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY+ G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 35/222 (15%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALD 185
+ P +V+ + K ++ EY G + +L + EP++ A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF------YAAQ 149
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYR 241
I EYLHS +I+RDLK +KV DFG + + KG GT
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPE 203
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEY 156
Q+ A+K++ I+ + + F E +++ P +VQ A + ++ EY
Sbjct: 100 QKVYAMKLLSKFEMIKRSDSAF---FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEY 156
Query: 157 MSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV 216
M G L +N Y + + ++ ++ +HS G+IHRD+K +
Sbjct: 157 MPGGDL---VNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL 213
Query: 217 KVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKP----YTRKVDVYSFGIVLWEL 269
K+ADFGT C+ ET +GT +++PE++K + Y R+ D +S G+ L+E+
Sbjct: 214 KLADFGT-CMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 270 TTALLPF 276
PF
Sbjct: 273 LVGDTPF 279
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 134 HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
HP +V + + + EY++ G L ++ ++ L E + +IS + YL
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYL 126
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM-GTYRWMAPEMIKEKP 252
H +G+I+RDLK + +K+ D+G + +T GT ++APE+++ +
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 253 YTRKVDVYSFGIVLWELTTALLPF 276
Y VD ++ G++++E+ PF
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P ++ + +I EY + G + + +S V+RL I G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 195 SQGVIHRDLKSXXXXXXDDM---RVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEK 251
++H DLK +K+ DFG S E + MGT ++APE++
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQG 278
P T D+++ GI+ + L T PF G
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVG 235
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 8/166 (4%)
Query: 116 AKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLS 175
A+ Q+ + E + L H NIV+ + + + ++ + ++ G L + +E YS +
Sbjct: 44 ARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA 103
Query: 176 TETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR---VKVADFGTSCLETQCRE 232
+ I + + H GV+HRDLK + VK+ADFG + +E Q +
Sbjct: 104 DAS--HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ 160
Query: 233 TK--GNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G GT +++PE+++++ Y + VD+++ G++L+ L PF
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 90 IYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPV 149
+YRG++ R VAVK + +P + A E Q E HPN++++ K
Sbjct: 41 VYRGMFDNRDVAVKRI-LPECF--SFADREVQLLRESDE-----HPNVIRYFCTEKDRQF 92
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS---- 205
I E + TL+ Y+ +K+ L E + L S G+ +LHS ++HRDLK
Sbjct: 93 QYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTS-GLAHLHSLNIVHRDLKPHNIL 150
Query: 206 -XXXXXXDDMRVKVADFGTSCLETQCRET----KGNMGTYRWMAPEMI----KEKPYTRK 256
++ ++DFG R + G GT W+APEM+ KE P T
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP-TYT 209
Query: 257 VDVYSFGIVLW 267
VD++S G V +
Sbjct: 210 VDIFSAGCVFY 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--RHTADEM 186
Query: 234 KGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL T F G
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAV----AVKMVRIPNQIEETRAKLEQQFKSEVAL 128
L I + +GA ++R +RA A K V P++ ++ + + E+
Sbjct: 156 LDHYDIHEELGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDK------ETVRKEIQT 207
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
+S L HP +V A + +I E+MS G L + E +S + + + +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 266
Query: 189 GMEYLHSQGVIHRDLK--SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
G+ ++H +H DLK + +K+ DFG + + K GT + APE
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 326
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + KP D++S G++ + L + L PF G
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--RHTADEM 186
Query: 234 KGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL T F G
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 73 LSQLFIGNKFASGAHSRIYRGIYKQRAV----AVKMVRIPNQIEETRAKLEQQFKSEVAL 128
L I + +GA ++R +RA A K V P++ ++ + + E+
Sbjct: 50 LDHYDIHEELGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDK------ETVRKEIQT 101
Query: 129 LSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
+S L HP +V A + +I E+MS G L + E +S + + + +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 160
Query: 189 GMEYLHSQGVIHRDLK--SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPE 246
G+ ++H +H DLK + +K+ DFG + + K GT + APE
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 220
Query: 247 MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + KP D++S G++ + L + L PF G
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + E
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--RHTADEM 186
Query: 234 KGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL T F G
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 21/213 (9%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
GA++++ + Q + I Q +R+++ F+ L + NI++ I
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV---FREVETLYQCQGNKNILELI 77
Query: 142 AACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHR 201
+ + ++ E + G++ ++ K++ ++ + R+ D++ +++LH++G+ HR
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS--RVVRDVAAALDFLHTKGIAHR 135
Query: 202 DLKSXXXXXXDDMR---VKVADF--------GTSCLETQCRETKGNMGTYRWMAPEMI-- 248
DLK + VK+ DF SC E G+ +MAPE++
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 249 ---KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ Y ++ D++S G+VL+ + + PF G
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------RHT 180
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------RHT 180
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 92 RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAA-------- 143
R R A+K +R T KL SEV LL+ L H +V++ AA
Sbjct: 26 RNALDSRYYAIKKIR------HTEEKLSTIL-SEVXLLASLNHQYVVRYYAAWLERRNFV 78
Query: 144 -----CKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
KK I EY TL ++ E + + RL I + Y+HSQG+
Sbjct: 79 KPXTAVKKKSTLFIQXEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGI 137
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS--------CLETQCRETKGN-------MGTYRWM 243
IHR+LK + VK+ DFG + L+ + G+ +GT ++
Sbjct: 138 IHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYV 197
Query: 244 APEMIK-EKPYTRKVDVYSFGIVLWELTTALLPF 276
A E++ Y K+D YS GI+ +E + PF
Sbjct: 198 ATEVLDGTGHYNEKIDXYSLGIIFFE---XIYPF 228
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P +V+ + K ++ EY G + +L + +S E R A I
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 152
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK ++V DFG + + KG GT ++A
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPEYLA 206
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------RHT 186
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 181
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 185
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 235
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 181
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 172
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 180
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 198
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 174
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 171
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P + + + K ++ EY G + +L + +S E R A I
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 153
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KV DFG + + KG GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLA 207
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 181
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 171
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 182
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 171
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 172
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 177
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 177
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 180
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 230
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL-ALDISR 188
+ P + + + K ++ EY G + +L + +S E R A I
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFYAAQIVL 153
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYRWMA 244
EYLHS +I+RDLK +KV DFG + + KG GT ++A
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPEYLA 207
Query: 245 PEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
PE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 187
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA------RHT 177
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 173
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 187
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 177
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 186
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 187
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALD 185
+ P +V+ + K ++ EY+ G + +L + EP++ A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF------YAAQ 149
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYR 241
I EYLHS +I+RDLK ++V DFG + + KG GT
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPE 203
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 194
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 195
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA------RHT 181
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 198
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 195
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 95
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALD 185
+ P +V+ + K ++ EY+ G + +L + EP++ A
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF------YAAQ 149
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYR 241
I EYLHS +I+RDLK ++V DFG + + KG GT
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPE 203
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 194
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALD 185
+ P +V+ + K ++ EY+ G + +L + EP++ A
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF------YAAQ 150
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYR 241
I EYLHS +I+RDLK ++V DFG + + KG GT
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA------KRVKGRTWXLCGTPE 204
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + E
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDEM 179
Query: 234 KGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL T F G
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 124 SEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL- 182
+E +L + P +V+ + K ++ EY G + +L + +S E R
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFS---EPHARFY 146
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----G 238
A I EYLHS +I+RDLK ++V DFG + + KG G
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA------KRVKGRTWXLCG 200
Query: 239 TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
T ++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + E
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA--RHTDDEM 199
Query: 234 KGNMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
G + T + APE M+ Y + VD++S G ++ EL T F G
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
K +G ++ +Y+G+ K V V + + EE + E++L+ L H NIV+
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR---EISLMKELKHENIVRL 68
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLNKKE----PYSLSTETVLRLALDISRGMEYLHSQ 196
++ E+M L+ Y++ + P L V + +G+ + H
Sbjct: 69 YDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYT 254
++HRDLK ++K+ DFG + + T + AP+ ++ + Y+
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 255 RKVDVYSFGIVLWELTTALLPFQG 278
+D++S G +L E+ T F G
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPG 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M + RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M + RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 83 ASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
SGA+ + + + VA+K + P Q E ++ E+ LL + H N++
Sbjct: 34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE----LFAKRAYRELRLLKHMRHENVIGL 89
Query: 141 IAACKKPPVYCIITEYMS----QGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQ 196
+ T++ GT L K E L + + L + +G+ Y+H+
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 197 GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKE-KPYTR 255
G+IHRDLK +D +K+ DFG + E G + T + APE+I YT+
Sbjct: 148 GIIHRDLKPGNLAVNEDCELKILDFGLA--RQADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 256 KVDVYSFGIVLWELTTALLPFQG 278
VD++S G ++ E+ T F+G
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKG 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 171
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M + RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K+
Sbjct: 61 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAG 118
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 119 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 175
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVA 289
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P + A F +
Sbjct: 176 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
Query: 290 EKV 292
+ +
Sbjct: 236 DYI 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DFG + R T
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------RHT 204
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y VD++S G ++ EL T F G
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPG 254
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 70 TADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALL 129
T ++ + +G H + + + KQ+ V +K QIE T +E +L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAM-KILDKQKVVKLK------QIEHTL--------NEKRIL 96
Query: 130 SRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNK----KEPYSLSTETVLRLALD 185
+ P + + + K ++ EY G + +L + EP++ A
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF------YAAQ 150
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNM----GTYR 241
I EYLHS +I+RDLK +KV DFG + + KG GT
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA------KRVKGRTWXLCGTPE 204
Query: 242 WMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
++APE+I K Y + VD ++ G++++E+ PF P+Q
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 120 QQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK-EPYSLSTET 178
Q+ E+ +L R H N++ + + + Y+ Q + L K + LS +
Sbjct: 86 QRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDH 145
Query: 179 VLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKG--- 235
+ I RG++Y+HS V+HRDLK +K+ DFG + + + G
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT 205
Query: 236 -NMGTYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ T + APE M+ K YT+ +D++S G +L E+ + F G
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 82 FASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL-FHPNIV 138
GAH+R+ I + AVK+ IE+ + + EV +L + H N++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKI------IEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYLHSQG 197
+ I ++ + ++ E M G++ +++K+ ++ L V++ D++ +++LH++G
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKG 131
Query: 198 VIHRDLKSXXXXXXDDMR---VKVADFGTS--------CLETQCRETKGNMGTYRWMAPE 246
+ HRDLK + VK+ DFG C E G+ +MAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 247 MI-----KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++ + Y ++ D++S G++L+ L + PF G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ D+G + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 115 RAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSL 174
R ++ FK E+ ++ L HP +V + + ++ + + G LR +L +
Sbjct: 56 RNEVRNVFK-ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHF 112
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETK 234
ETV ++ ++YL +Q +IHRD+K + V + DF + + + +
Sbjct: 113 KEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 235 GNMGTYRWMAPEMI---KEKPYTRKVDVYSFGIVLWELTTALLPFQ 277
GT +MAPEM K Y+ VD +S G+ +EL P+
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 82 FASGAHSRIY-----RGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFH-P 135
+GA+ +++ G + A+K+++ ++ +AK + ++E +L + P
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ--KAKTTEHTRTERQVLEHIRQSP 119
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL-DISRGMEYLH 194
+V A + +I +Y++ G L +L+++E + TE +++ + +I +E+LH
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF---TEHEVQIYVGEIVLALEHLH 176
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTS--CLETQCRETKGNMGTYRWMAPEMIK--E 250
G+I+RD+K + V + DFG S + + GT +MAP++++ +
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 251 KPYTRKVDVYSFGIVLWELTTALLPF 276
+ + VD +S G++++EL T PF
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 100 VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQ 159
VAVK + P Q +T AK + E+ LL + H NI+ + + Q
Sbjct: 52 VAVKKLSRPFQ-NQTHAK---RAYRELVLLKCVNHKNIISLLNV------------FTPQ 95
Query: 160 GTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLKSX 206
TL + + E + V+ + LD R G+++LHS G+IHRDLK
Sbjct: 96 KTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 207 XXXXXDDMRVKVADFGTSCLETQCRETKGNMGTY----RWMAPEMIKEKPYTRKVDVYSF 262
D +K+ DFG + T C T M Y + APE+I Y VD++S
Sbjct: 156 NIVVKSDCTLKILDFGLA--RTAC--TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSV 211
Query: 263 GIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
G ++ EL + FQG + V E++
Sbjct: 212 GCIMGELVKGCVIFQGTDHIDQWNKVIEQLG 242
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 6/202 (2%)
Query: 80 NKFASGAHSRIYRGIYKQR--AVAVKMVRIPNQIEETRAKLEQQFKS--EVALLSRLFHP 135
+ SGA ++ + K++ V VK ++ +E+ + + K E+A+LSR+ H
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 136 NIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
NI++ + + + ++ E G + P L + + + YL
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRL 148
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPY-T 254
+ +IHRD+K +D +K+ DFG++ + + GT + APE++ PY
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG 208
Query: 255 RKVDVYSFGIVLWELTTALLPF 276
+++++S G+ L+ L PF
Sbjct: 209 PELEMWSLGVTLYTLVFEENPF 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 99
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 156
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 99
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 156
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 82 FASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
G + +Y+ K + VA+K +++ ++ E + + + E+ LL L HPNI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHR-SEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
+ A ++ ++M T + K L+ + L +G+EYLH ++
Sbjct: 77 LLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 134
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPEMI-KEKPYTRKV 257
HRDLK ++ +K+ADFG + + R + T + APE++ + Y V
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGV 194
Query: 258 DVYSFGIVLWEL 269
D+++ G +L EL
Sbjct: 195 DMWAVGCILAEL 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 99
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 156
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 99
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 156
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 69 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 126
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 127 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 183
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 184 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
GA + ++RG +K+ + +++ N I R ++ Q + E +L +L H NIV+
Sbjct: 17 LGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRP-VDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 142 AACKKPPVY--CIITEYMSQGTLRMYLNKKEP---YSLSTETVLRLALDISRGMEYLHSQ 196
A ++ +I E+ G+L L +EP Y L L + D+ GM +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 197 GVIHRDLKSXXXXXXDDMRV---------KVADFGTSCLETQCRETKGNMGTYRWMAPEM 247
G++HR++K + MRV K+ DFG + + GT ++ P+M
Sbjct: 132 GIVHRNIKP-----GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 248 IK--------EKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+ +K Y VD++S G+ + T LPF+
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 82 FASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFI 141
GA + ++RG +K+ + +++ N I R ++ Q + E +L +L H NIV+
Sbjct: 17 LGQGATANVFRGRHKKTG-DLFAIKVFNNISFLRP-VDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 142 AACKKPPVY--CIITEYMSQGTLRMYLNKKEP---YSLSTETVLRLALDISRGMEYLHSQ 196
A ++ +I E+ G+L L +EP Y L L + D+ GM +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 197 GVIHRDLKSXXXXXXDDMRV---------KVADFGTSCLETQCRETKGNMGTYRWMAPEM 247
G++HR++K + MRV K+ DFG + + GT ++ P+M
Sbjct: 132 GIVHRNIKP-----GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 248 IK--------EKPYTRKVDVYSFGIVLWELTTALLPFQ 277
+ +K Y VD++S G+ + T LPF+
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 42 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 99
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 156
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 104 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 161
Query: 173 SLSTETVLRLALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 162 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 218
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
++ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 60 EVSKEDQEEWTA-DLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKL 118
++S E ++TA DL L + GA+ + + ++K + + RI + ++E K
Sbjct: 10 KISPEQHWDFTAEDLKDL---GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE---KE 63
Query: 119 EQQFKSEVALLSRLFH-PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS---- 173
++Q ++ ++ R P IVQF A + I E MS + Y K YS
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFY---KYVYSVLDD 120
Query: 174 -LSTETVLRLALDISRGMEYLHSQ-GVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ E + ++ L + + +L +IHRD+K +K+ DFG S
Sbjct: 121 VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180
Query: 232 ETKGNMGTYRWMAPEMI----KEKPYTRKVDVYSFGIVLWELTTALLPF 276
+ G +MAPE I + Y + DV+S GI L+EL T P+
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI 248
G+++LHS G+IHRDLK D +K+ DFG + + + T + APE+I
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI 195
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
Y VD++S G ++ EL + FQG
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSVIFQG 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ FG + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 32/224 (14%)
Query: 76 LFIGNKFASGAHSRI--YRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF 133
LFI K G S + G++ A+K + Q + A+ E A + RLF
Sbjct: 32 LFI-QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQRE-------ADMHRLF 83
Query: 134 -HPNIVQFIAAC-----KKPPVYCIITEYMSQGTLRMYLN--KKEPYSLSTETVLRLALD 185
HPNI++ +A C K + ++ + +GTL + K + L+ + +L L L
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLP-FFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 186 ISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGT---SCLETQ-------CRETKG 235
I RG+E +H++G HRDLK D+ + + D G+ +C+ + ++
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 236 NMGTYRWMAPEMIKEKPYT---RKVDVYSFGIVLWELTTALLPF 276
T + APE+ + + + DV+S G VL+ + P+
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 61 VSKEDQEEW---TADLSQLFIGNK--FASGAHSRIYRG--IYKQRAVAVKMVRIPNQIEE 113
S DQ ++ T +L +L + + A G + +Y + R A+K + + N+ E+
Sbjct: 10 ASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEK 68
Query: 114 TRAKLEQQFKSEVALLSRL-FHPNIVQFIAACK--------KPPVYCIITEYMSQGTLRM 164
RA ++ EV + +L HPNIVQF +A + ++TE + +G L
Sbjct: 69 NRAIIQ-----EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTE-LCKGQLVE 122
Query: 165 YLNKKEPYS-LSTETVLRLALDISRGMEYLHSQG--VIHRDLKSXXXXXXDDMRVKVADF 221
+L K E LS +TVL++ R ++++H Q +IHRDLK + +K+ DF
Sbjct: 123 FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182
Query: 222 GTSCLETQCRE---------------TKGNMGTYRWMAPEMI---KEKPYTRKVDVYSFG 263
G++ + + T+ YR PE+I P K D+++ G
Sbjct: 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYR--TPEIIDLYSNFPIGEKQDIWALG 240
Query: 264 IVLWELTTALLPFQ 277
+L+ L PF+
Sbjct: 241 CILYLLCFRQHPFE 254
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEE-TRAKLEQQFKSEVALLSRLFHPN 136
IGN A G S R + Q+ VA+K +IPN + T AK + E+ +L H N
Sbjct: 62 IGNG-AYGVVSSARRRLTGQQ-VAIK--KIPNAFDVVTNAK---RTLRELKILKHFKHDN 114
Query: 137 IVQFIAACKKP--------PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
I+ I +P VY ++ + + L ++ +P L+ E V + R
Sbjct: 115 IIA-IKDILRPTVPYGEFKSVYVVLD--LMESDLHQIIHSSQP--LTLEHVRYFLYQLLR 169
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTY---RWM- 243
G++Y+HS VIHRDLK ++ +K+ DFG + L T E + M Y RW
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 244 APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
APE M+ YT+ +D++S G + E+ F G
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 50/259 (19%)
Query: 82 FASGAHSRIYRGIYKQ-RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQF 140
G++ + I Q RA+ + N+I + K ++ K+EV L+ +L HPNI +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 141 IAACKKPPVYCIITEYMSQGTLRMYLN-------------------------KKEPYSLS 175
+ C++ E G L LN +E + S
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 176 TETVLRLALD--------------ISRGMEYLHSQGVIHRDLK--SXXXXXXDDMRVKVA 219
R +LD I + YLH+QG+ HRD+K + +K+
Sbjct: 154 IHG-FRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
Query: 220 DFGTS--CLETQCRETKG---NMGTYRWMAPEMIK--EKPYTRKVDVYSFGIVLWELTTA 272
DFG S + E G GT ++APE++ + Y K D +S G++L L
Sbjct: 213 DFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
Query: 273 LLPFQGMTPVQAAFAVAEK 291
+PF G+ V K
Sbjct: 273 AVPFPGVNDADTISQVLNK 291
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 113 ETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPY 172
E + + Q E+ +L P IV F A I E+M G+L L K
Sbjct: 45 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-- 102
Query: 173 SLSTETVLRLALDISRGMEYLHSQG-VIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCR 231
+ + + ++++ + +G+ YL + ++HRD+K +K+ DFG S Q
Sbjct: 103 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLI 159
Query: 232 ETKGN--MGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLP 275
+ N +GT +M+PE ++ Y+ + D++S G+ L E+ P
Sbjct: 160 DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 81 KFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K G + +Y+ A+K +R+ E+ + E+++L L H NIV+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
++ E++ Q L+ L+ E L + T L + G+ Y H + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKV 257
HRDLK + +K+ADFG + R+ + T + AP+ ++ K Y+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 258 DVYSFGIVLWELTTALLPFQGMT 280
D++S G + E+ F G++
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ D G + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 81 KFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K G + +Y+ A+K +R+ E+ + E+++L L H NIV+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
++ E++ Q L+ L+ E L + T L + G+ Y H + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKV 257
HRDLK + +K+ADFG + R+ + T + AP+ ++ K Y+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 258 DVYSFGIVLWELTTALLPFQGMT 280
D++S G + E+ F G++
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVS 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 81 KFASGAHSRIYRGIYK-QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQ 139
K G + +Y+ A+K +R+ E+ + E+++L L H NIV+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRL----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 140 FIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVI 199
++ E++ Q L+ L+ E L + T L + G+ Y H + V+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 200 HRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEKPYTRKV 257
HRDLK + +K+ADFG + R+ + T + AP+ ++ K Y+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 258 DVYSFGIVLWELTTALLPFQGMT 280
D++S G + E+ F G++
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVS 205
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ D G + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ DF + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +++ ++ VA+K VR+ + E + + E+ LL L H NIV
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLLKELKHKNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ ++ E+ Q L+ Y + L E V + +G+ + HS+ V
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPEMI-KEKPYTRK 256
+HRDLK + +K+ADFG + R + T + P+++ K Y+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 257 VDVYSFGIVLWELTTALLP-FQG 278
+D++S G + EL A P F G
Sbjct: 183 IDMWSAGCIFAELANAARPLFPG 205
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 78 IGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEE-TRAKLEQQFKSEVALLSRLFHPN 136
IGN A G S R + Q+ VA+K +IPN + T AK + E+ +L H N
Sbjct: 63 IGNG-AYGVVSSARRRLTGQQ-VAIK--KIPNAFDVVTNAK---RTLRELKILKHFKHDN 115
Query: 137 IVQFIAACKKP--------PVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISR 188
I+ I +P VY ++ + + L ++ +P +L E V + R
Sbjct: 116 IIA-IKDILRPTVPYGEFKSVYVVLD--LMESDLHQIIHSSQPLTL--EHVRYFLYQLLR 170
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTY---RWM- 243
G++Y+HS VIHRDLK ++ +K+ DFG + L T E + M Y RW
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 244 APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
APE M+ YT+ +D++S G + E+ F G
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 174 LSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRET 233
L+ + V L I RG++Y+HS +IHRDLK +D +K+ D G + R T
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA------RHT 175
Query: 234 KGNMGTY---RWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
M Y RW APE M+ Y + VD++S G ++ EL T F G
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 225
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 82 FASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRL-FHPNIV 138
GAH+R+ I + AVK+ IE+ + + EV +L + H N++
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKI------IEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYS-LSTETVLRLALDISRGMEYLHSQG 197
+ I ++ + ++ E M G++ +++K+ ++ L V++ D++ +++LH++G
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKG 131
Query: 198 VIHRDLKSXXXXXXDDMR---VKVADF--------GTSCLETQCRETKGNMGTYRWMAPE 246
+ HRDLK + VK+ DF C E G+ +MAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 247 MI-----KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
++ + Y ++ D++S G++L+ L + PF G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P +VQ A + ++ EYM G L +N Y + + ++ ++ +H
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE------TQCRETKGNMGTYRWMAPEMI 248
S G IHRD+K +K+ADFGT C++ +C +GT +++PE++
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGT-CMKMNKEGMVRCDTA---VGTPDYISPEVL 241
Query: 249 KEKP----YTRKVDVYSFGIVLWELTTALLPF 276
K + Y R+ D +S G+ L+E+ PF
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 17/234 (7%)
Query: 67 EEWTADLSQLFIGNKFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKS 124
+ + A+++ L + SG ++++ +++ +AVK +R EE + L
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRIL---MDL 74
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
+V L S P IVQ I E M GT L K+ + + ++ +
Sbjct: 75 DVVLKSHDC-PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTV 131
Query: 185 DISRGMEYL-HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWM 243
I + + YL GVIHRD+K + ++K+ DFG S + + G +M
Sbjct: 132 AIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYM 191
Query: 244 APEMIKE----KP-YTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKV 292
APE I KP Y + DV+S GI L EL T P++ + F V KV
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN---CKTDFEVLTKV 242
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P +VQ A + ++ EYM G L +N Y + + ++ ++ +H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE------TQCRETKGNMGTYRWMAPEMI 248
S G IHRD+K +K+ADFGT C++ +C +GT +++PE++
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGT-CMKMNKEGMVRCDTA---VGTPDYISPEVL 246
Query: 249 KEKP----YTRKVDVYSFGIVLWELTTALLPF 276
K + Y R+ D +S G+ L+E+ PF
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M L++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G+++ E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 270 TTALLPFQG 278
+ F G
Sbjct: 219 IKGGVLFPG 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAA-CKKPPVYCIITE 155
+R VA+K + P Q +T AK + E+ L+ + H NI+ + + +
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 156 YMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMR 215
Y+ + L++ L E + L + G+++LHS G+IHRDLK D
Sbjct: 105 YIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDAT 164
Query: 216 VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLP 275
+K+ DFG + + T + APE+I Y VD++S G+++ E+ +
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVL 224
Query: 276 FQG 278
F G
Sbjct: 225 FPG 227
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 135 PNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLH 194
P +VQ A + ++ EYM G L +N Y + + ++ ++ +H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 195 SQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLE------TQCRETKGNMGTYRWMAPEMI 248
S G IHRD+K +K+ADFGT C++ +C +GT +++PE++
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGT-CMKMNKEGMVRCDTA---VGTPDYISPEVL 246
Query: 249 KEKP----YTRKVDVYSFGIVLWELTTALLPF 276
K + Y R+ D +S G+ L+E+ PF
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 43/209 (20%)
Query: 96 KQRAVAVK-MVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPV----- 149
++R VA+K ++R+ + + + L E+A+L+RL H ++V+ + V
Sbjct: 77 EKRVVAIKKILRVFEDLIDCKRILR-----EIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
++ E +++ + P L+ + L ++ G++Y+HS G++HRDLK
Sbjct: 132 LYVVLEIADSDFKKLF---RTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 210 XXDDMRVKVADF-----------GTSCLETQCRETKGNMGTY----------------RW 242
D VKV DF G S L RE N+ T+ RW
Sbjct: 189 VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRW 248
Query: 243 M-APEMI-KEKPYTRKVDVYSFGIVLWEL 269
APE+I ++ YT +DV+S G + EL
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAEL 277
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 152 IITEYMSQGTLRMY------LNKKEPYSLSTETVLRLALDISRGMEYLHSQ-GVIHRDLK 204
II EYM ++ + L+K + + + + + Y+H++ + HRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI-KEKPYT-RKVDVYSF 262
+ RVK++DFG S ++ KG+ GTY +M PE E Y KVD++S
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVD-KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 263 GIVLWELTTALLPF 276
GI L+ + ++PF
Sbjct: 239 GICLYVMFYNVVPF 252
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKXVNHKNIISLLNV------------FT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ ++ +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKXVNHKNII------------SLLNVFT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
A G Y I +R VA+K + P Q +T AK + E+ L+ + H NI+ +
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLN 90
Query: 143 ACKKPP-------VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
VY I+ E M ++ L E + L + G+++LHS
Sbjct: 91 VFTPQKSLEEFQDVY-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
G+IHRDLK D +K+ DFG + + + T + APE+I Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 256 KVDVYSFGIVLWELTTALLPFQG 278
VD++S G ++ E+ + F G
Sbjct: 205 NVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 10/208 (4%)
Query: 90 IYRGIYKQRAVAV----KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
I RG + + +AV ++ R +I + + +FK E+ ++ L HPNI++ +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS 205
++ E + G L + K + S R+ D+ + Y H V HRDLK
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKRVFRESDAA--RIMKDVLSAVAYCHKLNVAHRDLKP 134
Query: 206 XX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSF 262
D +K+ DFG + + + +GT +++P+++ E Y + D +S
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL-EGLYGPECDEWSA 193
Query: 263 GIVLWELTTALLPFQGMTPVQAAFAVAE 290
G++++ L PF T + + E
Sbjct: 194 GVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M L++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDAN-----LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 10/208 (4%)
Query: 90 IYRGIYKQRAVAV----KMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACK 145
I RG + + +AV ++ R +I + + +FK E+ ++ L HPNI++ +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 146 KPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS 205
++ E + G L + K + S R+ D+ + Y H V HRDLK
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHKRVFRESDAA--RIMKDVLSAVAYCHKLNVAHRDLKP 151
Query: 206 XX---XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSF 262
D +K+ DFG + + + +GT +++P+++ E Y + D +S
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL-EGLYGPECDEWSA 210
Query: 263 GIVLWELTTALLPFQGMTPVQAAFAVAE 290
G++++ L PF T + + E
Sbjct: 211 GVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKXVNHKNIISLLNV------------FT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 43 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 86
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLK 146
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 147 PSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 207 IMGEMVRHKILFPG 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M L++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +++ ++ VA+K VR+ + E + + E+ LL L H NIV
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLLKELKHKNIV 64
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ ++ E+ Q L+ Y + L E V + +G+ + HS+ V
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPEMI-KEKPYTRK 256
+HRDLK + +K+A+FG + R + T + P+++ K Y+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 257 VDVYSFGIVLWELTTALLP-FQG 278
+D++S G + EL A P F G
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPG 205
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI 248
G+++LHS G+IHRDLK D +K+ DFG + + T + APE+I
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI 197
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
Y VD++S G ++ E+ + F G + V E++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 52 DSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA--VAVKMVRIPN 109
D+E V E K E+ ++ + + G+ ++R KQ AVK VR
Sbjct: 50 DNEGVLLTEKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR--- 106
Query: 110 QIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK 169
LE E+ + L P IV A ++ P I E + G+L + K
Sbjct: 107 --------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--K 156
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS-XXXXXXDDMRVKVADFGTS-CLE 227
+ L + L G+EYLH++ ++H D+K+ D R + DFG + CL+
Sbjct: 157 QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 216
Query: 228 TQCRETK---GNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G+ GT MAPE++ KP KVD++S ++ + P+
Sbjct: 217 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
A G Y I +R VA+K + P Q +T AK + E+ L+ + H NI+ +
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLN 90
Query: 143 ACKKPP-------VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
VY I+ E M ++ L E + L + G+++LHS
Sbjct: 91 VFTPQKSLEEFQDVY-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
G+IHRDLK D +K+ DFG + + + T + APE+I Y
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 256 KVDVYSFGIVLWELTTALLPFQG 278
VD++S G ++ E+ + F G
Sbjct: 205 NVDLWSVGCIMGEMVCHKILFPG 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M L++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M L++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP------NIVQFIAACKKPPVY 150
+ VA+KMVR + +Q E+ +L L N++ +
Sbjct: 122 HQHVALKMVR-------NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
C+ E +S L + K + S V + A I + ++ LH +IH DLK
Sbjct: 175 CMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 211 XDDMR--VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
R +KV DFG+SC E Q T YR APE+I Y +D++S G +L E
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGARYGMPIDMWSLGCILAE 291
Query: 269 LTTA--LLP 275
L T LLP
Sbjct: 292 LLTGYPLLP 300
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 88 RNVAIKKLSRPFQ-NQTHAKRAYR---ELVLMKCVNHKNIISLLNV------------FT 131
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 252 IMGEMVRHKILFPG 265
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 88 RNVAIKKLSRPFQ-NQTHAKRAYR---ELVLMKCVNHKNIISLLNV------------FT 131
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 252 IMGEMVRHKILFPG 265
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 49 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 104
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M ++ L E + L + G+++LHS G+IHRDLK
Sbjct: 105 Y-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 158
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 129 LSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
+S+LF HPNIV + A ++T +M+ G+ + + ++ + + +
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF--GTSCLETQCRE------TKGNMGT 239
+ ++Y+H G +HR +K+ D +V ++ S + R+ K ++
Sbjct: 139 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 198
Query: 240 YRWMAPEMIKE--KPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
W++PE++++ + Y K D+YS GI EL +PF+ M Q
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPP-------V 149
+R VA+K + P Q +T AK + E+ L+ + H NI+ + V
Sbjct: 50 ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105
Query: 150 YCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXX 209
Y I+ E M ++ L E + L + G+++LHS G+IHRDLK
Sbjct: 106 Y-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 210 XXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWEL 269
D +K+ DFG + + T + APE+I Y VD++S G ++ E+
Sbjct: 160 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 270 TTALLPFQGMTPVQAAFAVAEKVS 293
+ F G + V E++
Sbjct: 220 IKGGVLFPGTDHIDQWNKVIEQLG 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP------NIVQFIAACKKPPVY 150
+ VA+KMVR + +Q E+ +L L N++ +
Sbjct: 122 HQHVALKMVR-------NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
C+ E +S L + K + S V + A I + ++ LH +IH DLK
Sbjct: 175 CMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 211 XDDMR--VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
R +KV DFG+SC E Q T YR APE+I Y +D++S G +L E
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYR--APEVILGARYGMPIDMWSLGCILAE 291
Query: 269 LTTA--LLP 275
L T LLP
Sbjct: 292 LLTGYPLLP 300
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 51 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 94
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 154
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 155 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 215 IMGEMVRHKILFPG 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 44 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 87
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 147
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 148 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 208 IMGEMVRHKILFPG 221
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 129 LSRLF-HPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDIS 187
+S+LF HPNIV + A ++T +M+ G+ + + ++ + + +
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 122
Query: 188 RGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADF--GTSCLETQCRE------TKGNMGT 239
+ ++Y+H G +HR +K+ D +V ++ S + R+ K ++
Sbjct: 123 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV 182
Query: 240 YRWMAPEMIKE--KPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQ 283
W++PE++++ + Y K D+YS GI EL +PF+ M Q
Sbjct: 183 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 228
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 52 DSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA--VAVKMVRIPN 109
D+E V E K E+ ++ + + G+ ++R KQ AVK VR
Sbjct: 52 DNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR--- 108
Query: 110 QIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK 169
LE E+ + L P IV A ++ P I E + G+L + K
Sbjct: 109 --------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--K 158
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS-XXXXXXDDMRVKVADFGTS-CLE 227
+ L + L G+EYLH++ ++H D+K+ D R + DFG + CL+
Sbjct: 159 QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 218
Query: 228 TQCRETK---GNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G+ GT MAPE++ KP KVD++S ++ + P+
Sbjct: 219 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI 248
G+++LHS G+IHRDLK D +K+ DFG + + T + APE+I
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
Y VD++S G ++ E+ + F G + V E++
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 242
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 51 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 94
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 154
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 155 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 215 IMGEMVRHKILFPG 228
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 22/234 (9%)
Query: 52 DSENVETWEVSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRA--VAVKMVRIPN 109
D+E V E K E+ ++ + + G+ ++R KQ AVK VR
Sbjct: 36 DNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR--- 92
Query: 110 QIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKK 169
LE E+ + L P IV A ++ P I E + G+L + K
Sbjct: 93 --------LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--K 142
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKS-XXXXXXDDMRVKVADFGTS-CLE 227
+ L + L G+EYLH++ ++H D+K+ D R + DFG + CL+
Sbjct: 143 QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202
Query: 228 TQCRETK---GNM--GTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 276
G+ GT MAPE++ KP KVD++S ++ + P+
Sbjct: 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 49 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 92
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 93 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 152
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 153 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 212
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 213 IMGEMVRHKILFPG 226
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 44 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 87
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 147
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 148 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 207
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 208 IMGEMVRHKILFPG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 50 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 93
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 154 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 214 IMGEMVRHKILFPG 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 98 RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYM 157
R VA+K + P Q +T AK + E+ L+ + H NI+ + +
Sbjct: 43 RNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIISLLNV------------FT 86
Query: 158 SQGTLRMYLNK---KEPYSLSTETVLRLALDISR----------GMEYLHSQGVIHRDLK 204
Q TL + + E + V+++ LD R G+++LHS G+IHRDLK
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 146
Query: 205 SXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGI 264
D +K+ DFG + + T + APE+I Y VD++S G
Sbjct: 147 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 265 VLWELTTALLPFQG 278
++ E+ + F G
Sbjct: 207 IMGEMVRHKILFPG 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
A G Y I +R VA+K + P Q +T AK + E+ L+ + H NI+ +
Sbjct: 30 AQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLN 84
Query: 143 ACKKPP-------VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
VY I+ E M ++ L E + L + G+++LHS
Sbjct: 85 VFTPQKSLEEFQDVY-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHS 138
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
G+IHRDLK D +K+ DFG + + T + APE+I Y
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 256 KVDVYSFGIVLWELTTALLPFQG 278
VD++S G ++ E+ + F G
Sbjct: 199 NVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 152 IITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX---X 208
II E M G L + ++ + + + DI +++LHS + HRD+K
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 209 XXXDDMRVKVADFG------TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSF 262
D +K+ DFG + L+T C T ++APE++ + Y + D++S
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQNALQTPCY-------TPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 263 GIVLWELTTALLPF 276
G++++ L PF
Sbjct: 216 GVIMYILLCGFPPF 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 152 IITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXX---X 208
II E M G L + ++ + + + DI +++LHS + HRD+K
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 209 XXXDDMRVKVADFG------TSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSF 262
D +K+ DFG + L+T C T ++APE++ + Y + D++S
Sbjct: 144 SKEKDAVLKLTDFGFAKETTQNALQTPCY-------TPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 263 GIVLWELTTALLPFQGMT 280
G++++ L PF T
Sbjct: 197 GVIMYILLCGFPPFYSNT 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 83 ASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIVQFIA 142
A G Y I +R VA+K + P Q +T AK + E+ L+ + H NI+ +
Sbjct: 41 AQGIVCAAYDAIL-ERNVAIKKLSRPFQ-NQTHAK---RAYRELVLMKCVNHKNIIGLLN 95
Query: 143 ACKKPP-------VYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHS 195
VY I+ E M ++ L E + L + G+++LHS
Sbjct: 96 VFTPQKSLEEFQDVY-IVMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHS 149
Query: 196 QGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
G+IHRDLK D +K+ DFG + + T + APE+I Y
Sbjct: 150 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 256 KVDVYSFGIVLWELTTALLPFQG 278
VD++S G ++ E+ + F G
Sbjct: 210 NVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 125 EVALLSRLFHPNIVQ----FIAACKKPPVYCIITEYMSQGTL------RMYLNKKEPYSL 174
E+ALL L HPN++ F++ + ++ +Y R K+P L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADR--KVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125
Query: 175 STETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDD----MRVKVADFGTSCLETQC 230
V L I G+ YLH+ V+HRDLK + RVK+AD G + L
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 231 RETKGNMG----TYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTA 272
+ ++ T+ + APE ++ + YT+ +D+++ G + EL T+
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 81 KFASGAHSRIYRGI--YKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G + +Y+ I VA+K +R+ ++ E + EV+LL L H NI+
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR----EVSLLKELQHRNII 96
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + +I EY ++ L+ Y++K +S + + G+ + HS+
Sbjct: 97 ELKSVIHHNHRLHLIFEY-AENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 199 IHRDLKS-----XXXXXXDDMRVKVADFGTS-CLETQCRETKGNMGTYRWMAPE-MIKEK 251
+HRDLK + +K+ DFG + R+ + T + PE ++ +
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 252 PYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAE 290
Y+ VD++S + E+ F G + + F + E
Sbjct: 214 HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE 252
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%)
Query: 189 GMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI 248
G+++LHS G+IHRDLK D +K+ DFG + + T + APE+I
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI 199
Query: 249 KEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKVS 293
Y VD++S G ++ E+ + F G + V E++
Sbjct: 200 LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLG 244
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G +++ +++ + VA+K V + N+ E E+ +L L H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE----GFPITALREIKILQLLKHENVV 80
Query: 139 QFIAACK---------KPPVYCII--TEYMSQGTLRMYLNKKEPYSLS-TETVLRLALDI 186
I C+ K +Y + E+ G L L K ++LS + V+++ L+
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLN- 136
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR----W 242
G+ Y+H ++HRD+K+ D +K+ADFG + + + ++ N R W
Sbjct: 137 --GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 243 MAPE--MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
P ++ E+ Y +D++ G ++ E+ T QG T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G +++ +++ + VA+K V + N+ E E+ +L L H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE----GFPITALREIKILQLLKHENVV 80
Query: 139 QFIAACK---------KPPVYCII--TEYMSQGTLRMYLNKKEPYSLS-TETVLRLALDI 186
I C+ K +Y + E+ G L L K ++LS + V+++ L+
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLN- 136
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR----W 242
G+ Y+H ++HRD+K+ D +K+ADFG + + + ++ N R W
Sbjct: 137 --GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 243 MAPE--MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
P ++ E+ Y +D++ G ++ E+ T QG T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G +++ +++ + VA+K V + N+ E E+ +L L H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE----GFPITALREIKILQLLKHENVV 80
Query: 139 QFIAACK---------KPPVYCII--TEYMSQGTLRMYLNKKEPYSLS-TETVLRLALDI 186
I C+ K +Y + E+ G L L K ++LS + V+++ L+
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLN- 136
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR----W 242
G+ Y+H ++HRD+K+ D +K+ADFG + + + ++ N R W
Sbjct: 137 --GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 243 MAPE--MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
P ++ E+ Y +D++ G ++ E+ T QG T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 81 KFASGAHSRIYRGIYKQ--RAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
K G +++ +++ + VA+K V + N+ E E+ +L L H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE----GFPITALREIKILQLLKHENVV 79
Query: 139 QFIAACK---------KPPVYCII--TEYMSQGTLRMYLNKKEPYSLS-TETVLRLALDI 186
I C+ K +Y + E+ G L L K ++LS + V+++ L+
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLN- 135
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYR----W 242
G+ Y+H ++HRD+K+ D +K+ADFG + + + ++ N R W
Sbjct: 136 --GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 243 MAPE--MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMT 280
P ++ E+ Y +D++ G ++ E+ T QG T
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 79/189 (41%), Gaps = 20/189 (10%)
Query: 97 QRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHP------NIVQFIAACKKPPVY 150
+ VA+KMVR + +Q E+ +L L N++ +
Sbjct: 122 HQHVALKMVR-------NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174
Query: 151 CIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXX 210
C+ E +S L + K + S V + A I + ++ LH +IH DLK
Sbjct: 175 CMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL 233
Query: 211 XDDMR--VKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWE 268
R +KV DFG+SC E Q YR APE+I Y +D++S G +L E
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYR--APEVILGARYGMPIDMWSLGCILAE 291
Query: 269 LTTA--LLP 275
L T LLP
Sbjct: 292 LLTGYPLLP 300
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 75 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 130
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 131 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 191 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 244
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 123
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 184 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 64 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 119
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 120 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 180 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 145
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 206 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 123
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 124 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 184 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 116 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 120 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 178 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 229
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 116 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 57 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 116
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 117 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 175 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA 115
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 116 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 116
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 117 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 177 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 84 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 139
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 140 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 200 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 69 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 124
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 125 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 185 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 238
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 145
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 92 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 147
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 148 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 208 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 261
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNK 168
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLE 227
K+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 116 KQ--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Query: 228 TQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 94 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 149
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 150 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 210 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 263
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 119 EQQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRMYLNKKEP 171
+++FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ +
Sbjct: 135 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH---- 190
Query: 172 YSLSTET--VLRLAL---DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSC 225
YS + +T V+ + L + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 191 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
Query: 226 LETQCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 251 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 304
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 64
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E M + ++ E +L E +
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQV 123
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 182
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 81 KFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
+ G+ ++R KQ AVK VR+ E RA+ E+ + L P IV
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRL----EVFRAE-------ELMACAGLTSPRIV 129
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
A ++ P I E + G+L + KE L + L G+EYLHS+ +
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 199 IHRDLKS-XXXXXXDDMRVKVADFGTS-CLETQCRETK---GNM--GTYRWMAPEMIKEK 251
+H D+K+ D + DFG + CL+ G+ GT MAPE++ +
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 252 PYTRKVDVYSFGIVLWELTTALLPF 276
KVDV+S ++ + P+
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 81 KFASGAHSRIYRGIYKQRA--VAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLFHPNIV 138
+ G+ ++R KQ AVK VR+ E RA+ E+ + L P IV
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRL----EVFRAE-------ELMACAGLTSPRIV 148
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
A ++ P I E + G+L + KE L + L G+EYLHS+ +
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 199 IHRDLKS-XXXXXXDDMRVKVADFGTS-CLETQCRETK---GNM--GTYRWMAPEMIKEK 251
+H D+K+ D + DFG + CL+ G+ GT MAPE++ +
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 252 PYTRKVDVYSFGIVLWELTTALLPF 276
KVDV+S ++ + P+
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 90
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 91 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 149 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 120 QQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNKK 169
+ FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y K
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLET 228
+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 117 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 229 QCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 125 EVALLSRLFHPNIVQF--------------IAACKKPPVYCIITEYMSQGTLRMYLNKKE 170
E+ ++ RL H NIV+ + + + I+ EYM N E
Sbjct: 58 EIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD----LANVLE 113
Query: 171 PYSLSTETVLRLALDISRGMEYLHSQGVIHRDLK-SXXXXXXDDMRVKVADFGTSCLETQ 229
L E + RG++Y+HS V+HRDLK + +D+ +K+ DFG + +
Sbjct: 114 QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP 173
Query: 230 CRETKGNMG----TYRWMAPE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQA 284
KG++ T + +P ++ YT+ +D+++ G + E+ T F G ++
Sbjct: 174 HYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233
Query: 285 AFAVAEKV 292
+ E +
Sbjct: 234 MQLILESI 241
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 120 QQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNKK 169
+ FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ + R+ Y K
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLET 228
+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 117 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 229 QCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 40/228 (17%)
Query: 81 KFASGAHSRIYRGIYKQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIVQ 139
K GA+ +++ I ++ V + +I + + + ++ F+ E+ +L+ L H NIV
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS-TDAQRTFR-EIMILTELSGHENIVN 73
Query: 140 FIAACKKP---PVYCIITEYMS---QGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYL 193
+ + VY ++ +YM +R N EP + + + ++YL
Sbjct: 74 LLNVLRADNDRDVY-LVFDYMETDLHAVIRA--NILEPVHKQY-----VVYQLIKVIKYL 125
Query: 194 HSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMG--------------- 238
HS G++HRD+K + VKVADFG S R N+
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 239 ------TYRWM-APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
RW APE ++ YT+ +D++S G +L E+ F G
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 128 LLSRLFHPNIVQ---FIAACKK--PPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRL 182
L+ + HP+IVQ F+ + PV I+ EY+ +L+ +K P + E + L
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVA---EAIAYL 188
Query: 183 ALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRW 242
L+I + YLHS G+++ DLK ++ ++K+ D G ++ GT +
Sbjct: 189 -LEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV---SRINSFGYLYGTPGF 243
Query: 243 MAPEMIKEKPYTRKVDVYSFGIVLWELTTAL 273
APE+++ P T D+Y+ G L LT L
Sbjct: 244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDL 273
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 74
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 75 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 133 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 119 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 120 QQFKS-EVALLSRLFHPNIVQ-----FIAACKKPPVYC-IITEYMSQGTLRM---YLNKK 169
+ FK+ E+ ++ +L H NIV+ + + KK VY ++ +Y+ R+ Y K
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK 116
Query: 170 EPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRV-KVADFGTSCLET 228
+ +L V + R + Y+HS G+ HRD+K D V K+ DFG++
Sbjct: 117 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 229 QCRETKGNMGTYRWMAPEMI-KEKPYTRKVDVYSFGIVLWELTTALLPFQG 278
+ + + + APE+I YT +DV+S G VL EL F G
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 71
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 72 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 130 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 70
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 71 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 129 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 118
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 119 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + +T +GT +M PE IK+ +R
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 60
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 178
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 169 KEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLET 228
K P L+ E + + ++ G ++H G+IHRDLK D VKV DFG +
Sbjct: 121 KTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
Query: 229 QCRET-------------------KGNMGTY---RWM-APEMI-KEKPYTRKVDVYSFGI 264
++T K + ++ RW APE+I ++ YT+ +D++S G
Sbjct: 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240
Query: 265 VLWELTTAL 273
+ EL L
Sbjct: 241 IFAELLNML 249
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 125 EVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLAL 184
E+ +L +L HPN+V + ++ ++ EY L L++ + + V +
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE-LDRYQ-RGVPEHLVKSITW 109
Query: 185 DISRGMEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWM- 243
+ + + H IHRD+K +K+ DFG + L T + + RW
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR 169
Query: 244 APE-MIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAV 288
+PE ++ + Y VDV++ G V EL + + + G + V + +
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 190 MEYLHSQGVIHRDLKSXXXXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIK 249
+ +LHSQG++H D+K R K+ DFG + G R+MAPE+++
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ 229
Query: 250 EKPYTRKVDVYSFGIVLWELTTAL-LPFQG 278
Y DV+S G+ + E+ + LP G
Sbjct: 230 GS-YGTAADVFSLGLTILEVACNMELPHGG 258
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 60
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 178
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 60
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 119
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 178
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 63
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 64 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 181
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 65
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 183
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 64
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 123
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 182
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 65
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 183
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGI--YKQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 93
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 211
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 65
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 124
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 183
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 107
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 225
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGI--YKQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 92
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 210
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 79
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 197
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 87
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 88 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 146
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 205
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGI--YKQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 93
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 211
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGI--YKQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 93
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 211
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 80
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 81 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 198
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMVRIPNQIEETRAKLEQQFKSEVALLSR 131
SQ +G SG +Y GI VA+K V + + EV LL +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 132 L--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRG 189
+ +++ + ++P + +I E + ++ E +L E +
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 190 MEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMI 248
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + PE I
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPPEWI 201
Query: 249 KEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
+ Y R V+S GI+L+++ +PF+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 80
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 81 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 139
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 198
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 81 KFASGAHSRIYRGIYKQRAV-AVKMVRIPNQIEETRAKLEQQFKSEVALLSRLF-HPNIV 138
+ SG S++++ + +++ + A+K V + EE + +++E+A L++L H + +
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNL----EEADNQTLDSYRNEIAYLNKLQQHSDKI 90
Query: 139 QFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGV 198
+ + Y + L +L KK+ S+ ++ + +H G+
Sbjct: 91 IRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 199 IHRDLKSXXXXXXDDMRVKVADFGTSCL---ETQCRETKGNMGTYRWMAPEMIKEKPYTR 255
+H DLK D M +K+ DFG + + +GT +M PE IK+ +R
Sbjct: 149 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 256 K-----------VDVYSFGIVLWELTTALLPFQ 277
+ DV+S G +L+ +T PFQ
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 79
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 138
Query: 187 SRGMEYLHSQGVIHRDLKSXX-XXXXDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 197
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 24/114 (21%)
Query: 186 ISRGMEYLHSQGVIHRDLK-------------SXXXXXXDDMRVKVADFGTSC--LETQC 230
I+ G+ +LHS +IHRDLK + +++R+ ++DFG C L++
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-CKKLDSGQ 200
Query: 231 RETKGNM----GTYRWMAPEMIKE---KPYTRKVDVYSFGIVLWE-LTTALLPF 276
+ N+ GT W APE+++E + TR +D++S G V + L+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 93
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 152
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 211
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 92
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 210
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 24/114 (21%)
Query: 186 ISRGMEYLHSQGVIHRDLK-------------SXXXXXXDDMRVKVADFGTSC--LETQC 230
I+ G+ +LHS +IHRDLK + +++R+ ++DFG C L++
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL-CKKLDSGQ 200
Query: 231 RETKGNM----GTYRWMAPEMIKE---KPYTRKVDVYSFGIVLWE-LTTALLPF 276
+ N+ GT W APE+++E + TR +D++S G V + L+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 107
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 225
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 92
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 210
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)
Query: 74 SQLFIGNKFASGAHSRIYRGIY--KQRAVAVKMV---RIPNQIEETRAKLEQQFKSEVAL 128
SQ +G SG +Y GI VA+K V RI + E + EV L
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGT---RVPMEVVL 92
Query: 129 LSRL--FHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETVLRLALDI 186
L ++ +++ + ++P + +I E + ++ E +L E +
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV 151
Query: 187 SRGMEYLHSQGVIHRDLKSXXXXX-XDDMRVKVADFGTSCLETQCRETKGNMGTYRWMAP 245
+ + H+ GV+HRD+K + +K+ DFG+ L T + GT + P
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD-GTRVYSPP 210
Query: 246 EMIKEKPY-TRKVDVYSFGIVLWELTTALLPFQ 277
E I+ Y R V+S GI+L+++ +PF+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,489,778
Number of Sequences: 62578
Number of extensions: 274792
Number of successful extensions: 3455
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 778
Number of HSP's gapped (non-prelim): 1141
length of query: 294
length of database: 14,973,337
effective HSP length: 98
effective length of query: 196
effective length of database: 8,840,693
effective search space: 1732775828
effective search space used: 1732775828
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)