BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022648
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82662|SUCB_ARATH Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1
Length = 421
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/233 (80%), Positives = 220/233 (94%)
Query: 2 VRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKA 61
+RGL+NKLVSRSL+++G+WQ QQLRRLNIHEYQGAELM KYG+NVPKG+A +S++EVKKA
Sbjct: 1 MRGLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKA 60
Query: 62 IQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQT 121
IQD FP+ ELVVKSQILAGGRGLGTFKSGLKGGVHIVK++E E++AGKMLGQ+LVTKQT
Sbjct: 61 IQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQT 120
Query: 122 GPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVK 181
GPQGK+VSKVYLCEKLSLVNEMYF+I+LDRK+AGP+II C KGGTSIEDLAEK+P+MI+K
Sbjct: 121 GPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIK 180
Query: 182 VPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
VPIDVF GITDEDAAKVVDGLAPK ADR D+IEQVKKLY+LF ++DCT+LE++
Sbjct: 181 VPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEIN 233
>sp|Q6K9N6|SUCB_ORYSJ Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1
SV=1
Length = 422
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/234 (81%), Positives = 210/234 (89%)
Query: 1 MVRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKK 60
MVRG L KL SR+L+VAG+WQ QQLRRLNIHEYQGAELM KYGINVP+G A SV+EVK
Sbjct: 1 MVRGSLGKLASRALSVAGKWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKN 60
Query: 61 AIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQ 120
+++ FP KE+VVKSQILAGGRGLGTFKSGL+GGVHIVK EE E LA KMLGQILVTKQ
Sbjct: 61 TLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQ 120
Query: 121 TGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIV 180
TGPQGKIVSKVYLCEKLSLVNEMYFAI LDR TAGP+II CSKGGTSIEDLAEKYP+MI+
Sbjct: 121 TGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMII 180
Query: 181 KVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
KVPIDVF GITD+DAAKVVDGLAPK ADR +IEQ+KKLY+LFC+SDCTLLE++
Sbjct: 181 KVPIDVFKGITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEIN 234
>sp|Q84LB6|SUCB_SOLLC Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Solanum lycopersicum PE=1 SV=1
Length = 417
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/230 (80%), Positives = 215/230 (93%)
Query: 5 LLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD 64
+L KL ++SL+VAG+WQQQQLRRLNIHEYQGAELM+KYGINVPKG+AVAS+DEVKKAIQD
Sbjct: 1 MLRKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVASLDEVKKAIQD 60
Query: 65 AFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQ 124
FP+ E+VVKSQ+LAGGRGLGTFK+G +GGVHIVK ++ ED+A KMLGQILVTKQTG Q
Sbjct: 61 VFPNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEDIASKMLGQILVTKQTGAQ 120
Query: 125 GKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPI 184
GK+VSKVYLCEK+SLVNEMYF+I+LDR TAGP+II C KGGTSIEDLAEK+P+MI+KVPI
Sbjct: 121 GKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPI 180
Query: 185 DVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
DVF GI+D DAAKVVDGLAPKVADRND+IEQVKKLYKLFCE+DCT+LE++
Sbjct: 181 DVFKGISDADAAKVVDGLAPKVADRNDSIEQVKKLYKLFCETDCTMLEIN 230
>sp|Q55AI5|SUCB1_DICDI Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=scsC PE=3 SV=1
Length = 445
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Query: 24 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGR 83
Q R LN+HEYQ ++M YGIN P G + +E +K + + ++LVVK+Q+LAGGR
Sbjct: 31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAE--VMNTQDLVVKAQVLAGGR 88
Query: 84 GLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
G G F SGLKGGV + E+V+ A KMLG LVTKQTG GK+V +VY+ E+ L E
Sbjct: 89 GKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKE 148
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
MYFAI++DRK GP+++ +GG IE +A P+ I K PID+ G+ E ++ + L
Sbjct: 149 MYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKL 208
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ + A +Q+KKLY F ++DCTL+E++
Sbjct: 209 GFSKKNISMAQDQMKKLYDFFIKNDCTLVEIN 240
>sp|Q148D5|SUCB1_BOVIN Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Bos taurus GN=SUCLA2 PE=2 SV=1
Length = 463
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 143/230 (62%), Gaps = 3/230 (1%)
Query: 19 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQI 78
Q Q QQ R L++HEY EL+ + G+++PKG S DE AI K++V+K+Q+
Sbjct: 44 QIQHQQQRNLSLHEYLSMELLQEAGVSIPKGHVAKSPDEAY-AIAKKL-GSKDVVIKAQV 101
Query: 79 LAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKL 137
LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+
Sbjct: 102 LAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERR 161
Query: 138 SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAK 197
E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A +
Sbjct: 162 YPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVR 221
Query: 198 VVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICM 247
+ + + + A E + KLY F + D T++E++ S ++CM
Sbjct: 222 LAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCM 271
>sp|O97580|SUCB1_PIG Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
(Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1
Length = 425
Score = 174 bits (442), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 7/226 (3%)
Query: 26 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGL 85
R L++HEY EL+ + G+++PKG S DE AI K++V+K+Q+LAGGRG
Sbjct: 13 RNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAY-AIAKKL-GSKDVVIKAQVLAGGRGK 70
Query: 86 GTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMY 144
GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E Y
Sbjct: 71 GTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYY 130
Query: 145 FAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GL 202
FAI ++R GP++IG S+GG +IED+A + P IVK PID+ GI E A ++ G
Sbjct: 131 FAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGF 190
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICMS 248
P + D A E + KLY LF + D T++E++ S ++CM
Sbjct: 191 PPSIVDS--AAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMD 234
>sp|Q9YI37|SUCB1_COLLI Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
(Fragment) OS=Columba livia GN=SUCLA2 PE=1 SV=1
Length = 413
Score = 174 bits (441), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 144/224 (64%), Gaps = 3/224 (1%)
Query: 26 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGL 85
RRL++HEY L+ + GI+VP G+ + DE K ++ K+LV+K+Q+LAGGRG
Sbjct: 1 RRLSLHEYLSMGLLQEAGISVPHGVVARTPDEAYKIAKEI--GSKDLVIKAQVLAGGRGK 58
Query: 86 GTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMY 144
GTF+ GLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V++CE+ E Y
Sbjct: 59 GTFEGGLKGGVKIVFSPEEAKAVSSRMIGKKLFTKQTGEKGRICNQVFVCERRYPRREYY 118
Query: 145 FAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAP 204
FAI ++R GP++IG S+GG +IED+A + P+ I+K PID+ GI E A ++ +
Sbjct: 119 FAITMERSFQGPVLIGSSQGGVNIEDVAAENPDAIIKEPIDIVEGIKKEQAVRLAQKMGF 178
Query: 205 KVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICMS 248
++A E + KLY LF + D T++E++ + +++CM
Sbjct: 179 PSNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMD 222
>sp|Q9P567|SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=B9J10.140 PE=3 SV=1
Length = 447
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 141/227 (62%), Gaps = 7/227 (3%)
Query: 9 LVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPD 68
L SR +V+ QQQ R L+IHEY A+L+ +YGI VPKG VA +AI
Sbjct: 22 LASRLPSVS----QQQRRALSIHEYLSADLLRQYGIGVPKG-DVARTGAEAEAIAKQI-G 75
Query: 69 HKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKI 127
+++V+K+Q+LAGGRG GTF +GLKGGV ++ E + A +M+G L+TKQTG QG++
Sbjct: 76 GEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRL 135
Query: 128 VSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVF 187
S VY+CE+ E Y A+++DR + GP+I+ S+GG IE +A++ P I ID+
Sbjct: 136 CSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDIN 195
Query: 188 NGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
G+TDE A + L +A + ++KLYK+FCE D T +E++
Sbjct: 196 VGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEIN 242
>sp|Q9P2R7|SUCB1_HUMAN Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Homo sapiens GN=SUCLA2 PE=1 SV=3
Length = 463
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 141/225 (62%), Gaps = 7/225 (3%)
Query: 26 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGL 85
R L++HEY EL+ + G++VPKG S DE AI K++V+K+Q+LAGGRG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAY-AIAKKL-GSKDVVIKAQVLAGGRGK 108
Query: 86 GTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMY 144
GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E Y
Sbjct: 109 GTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYY 168
Query: 145 FAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GL 202
FAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G
Sbjct: 169 FAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGF 228
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICM 247
P + + A E + KLY LF + D T++E++ S ++CM
Sbjct: 229 PPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCM 271
>sp|Q9Z2I9|SUCB1_MOUSE Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Mus musculus GN=Sucla2 PE=1 SV=2
Length = 463
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 140/225 (62%), Gaps = 7/225 (3%)
Query: 26 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGL 85
R L++HEY EL+ + G++VPKG S DE AI K++V+K+Q+LAGGRG
Sbjct: 51 RTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAY-AIAKKL-GSKDVVIKAQVLAGGRGK 108
Query: 86 GTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMY 144
GTF SGLKGGV IV EE + ++ +M+GQ L+TKQTG +G+I ++V +CE+ E Y
Sbjct: 109 GTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYY 168
Query: 145 FAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GL 202
FAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G
Sbjct: 169 FAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGF 228
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICM 247
+ D A E + KLY LF + D T++E++ S ++CM
Sbjct: 229 PSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCM 271
>sp|Q4R517|SUCB1_MACFA Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1
Length = 463
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 7/225 (3%)
Query: 26 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGL 85
R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG
Sbjct: 51 RNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKL--GSKDVVIKAQVLAGGRGK 108
Query: 86 GTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMY 144
GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E Y
Sbjct: 109 GTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYY 168
Query: 145 FAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GL 202
FAI ++R GP++IG S+GG +IED+A + P I+ PID+ GI E A ++ G
Sbjct: 169 FAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGF 228
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICM 247
P + + A E + KLY LF + D T++E++ S ++CM
Sbjct: 229 PPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCM 271
>sp|P53587|SUCB_NEOFR Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal
OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2
Length = 437
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 146/255 (57%), Gaps = 20/255 (7%)
Query: 10 VSRSLTVAGQW-----QQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD 64
V+RS + A Q Q R L++HEY L+ +Y +N PKG+ + +E +A +
Sbjct: 5 VTRSTSKAAPALASIAQTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKK 64
Query: 65 AFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGP 123
+ ++LV+K+Q+LAGGRG G F SGL+GGV + E+V+D A KMLG L+TKQTG
Sbjct: 65 L--NTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGA 122
Query: 124 QGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVP 183
G+ + VY+ E+ E YFAI+LDR T GP+++ S+GG IE++A+ P+ I+ VP
Sbjct: 123 AGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVP 182
Query: 184 IDVFNGITDE---DAAK---VVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNF 237
+ G+T E D AK + P+ AD KLYK+F E D T++E++
Sbjct: 183 FSIKTGLTREVALDTAKKMGFTEKCVPQAAD------TFMKLYKIFIEKDATMVEINPMA 236
Query: 238 YISLVLLICMSLLVG 252
+ ++CM G
Sbjct: 237 ENNRGEVVCMDAKFG 251
>sp|Q869S7|SUCB2_DICDI Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=scsB PE=3 SV=1
Length = 420
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 136/226 (60%), Gaps = 5/226 (2%)
Query: 24 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGR 83
Q+R LN+HEYQ LM KYG+N K V + AI+ A + ELVVK+Q+ AGGR
Sbjct: 23 QVRYLNLHEYQSKSLMDKYGVNTQKWRVVTKASD---AIKAASELNGELVVKAQVHAGGR 79
Query: 84 GLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN 141
G G+F ++G KGGVH+ K +E E L +MLG+ LVTKQT +G V V L E +
Sbjct: 80 GKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKR 139
Query: 142 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG 201
E+YFAI++DRK GP++I +GG IE +AE+ P++I K PID+ GI E + +
Sbjct: 140 ELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEK 199
Query: 202 LAPKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICM 247
L A +Q++ LY+LF +SD T +E++ + +ICM
Sbjct: 200 LGFTGEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICM 245
>sp|P53590|SUCB2_PIG Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
(Fragment) OS=Sus scrofa GN=SUCLG2 PE=1 SV=2
Length = 433
Score = 164 bits (415), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 6/237 (2%)
Query: 2 VRGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEV 58
R LL L R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E
Sbjct: 10 ARKLLRDLAFRPPLLAARSQVVQLTPRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEA 69
Query: 59 KKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEV-EDLAGKMLGQILV 117
+A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K EV LA +M+G L
Sbjct: 70 LEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLA 127
Query: 118 TKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPN 177
TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P
Sbjct: 128 TKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPE 187
Query: 178 MIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +EV+
Sbjct: 188 LIFKEQIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVN 244
>sp|Q3MHX5|SUCB2_BOVIN Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Bos taurus GN=SUCLG2 PE=2 SV=1
Length = 432
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 6/237 (2%)
Query: 2 VRGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEV 58
R LL LV R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E
Sbjct: 9 ARKLLRDLVLRPPLLAARSQVVQLTSRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEA 68
Query: 59 KKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEV-EDLAGKMLGQILV 117
+A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V LA +M+G L
Sbjct: 69 LEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYNLA 126
Query: 118 TKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPN 177
TKQT +G V KV + E L + E Y AI++DR GP+++G +GG IE++A P
Sbjct: 127 TKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPE 186
Query: 178 MIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +EV+
Sbjct: 187 LIFKEQIDIIEGIKDSQAQRMAENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVN 243
>sp|Q9Z2I8|SUCB2_MOUSE Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Mus musculus GN=Suclg2 PE=2 SV=3
Length = 433
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 4/223 (1%)
Query: 14 LTVAGQWQQQQLRR-LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKEL 72
L V Q RR LN+ EYQ +LM+++G+ V + + E +A + + KE+
Sbjct: 24 LAVRSQAGHLTPRRWLNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRL--NAKEI 81
Query: 73 VVKSQILAGGRGLGTFKSGLKGGVHIVKKEEV-EDLAGKMLGQILVTKQTGPQGKIVSKV 131
V+K+QILAGGRG G F SGLKGGVH+ K +V +LA +M+G L TKQT +G V+KV
Sbjct: 82 VLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKV 141
Query: 132 YLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGIT 191
+ E L + E Y AI++DR GP+I+G +GG IE++A P +I K ID+F GI
Sbjct: 142 MVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIK 201
Query: 192 DEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
D A ++ + L + +N A +Q+ KLY LF + D T +EV+
Sbjct: 202 DSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVN 244
>sp|P53312|SUCB_YEAST Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=LSC2 PE=1 SV=1
Length = 427
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 23 QQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGG 82
Q R L+IHEY+ A+L+ +YGI P+G + +E +A + + +LV+K+Q L GG
Sbjct: 26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKL--NTNKLVIKAQALTGG 83
Query: 83 RGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN 141
RG G F +G K GVH+++ ++ ED+A +ML L+TKQTG GK VS VY+ +++ +
Sbjct: 84 RGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKH 143
Query: 142 EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD- 200
E Y +I++DR+T P+II S+GG +IE++AE+ P+ I K I+ G++ + A V
Sbjct: 144 EAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKS 203
Query: 201 -GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
G +P D +A + V LYK+F E D T +E++
Sbjct: 204 LGFSPDAQD--EAAKAVSNLYKIFMERDATQVEIN 236
>sp|Q96I99|SUCB2_HUMAN Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Homo sapiens GN=SUCLG2 PE=1 SV=2
Length = 432
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 133/228 (58%), Gaps = 4/228 (1%)
Query: 9 LVSRSLTVAGQWQQQQLRR-LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFP 67
L R L Q Q RR LN+ EYQ +LM+ G+ V + + +E +A +
Sbjct: 18 LRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRL-- 75
Query: 68 DHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEV-EDLAGKMLGQILVTKQTGPQGK 126
+ KE+V+K+QILAGGRG G F SGLKGGVH+ K V LA +M+G L TKQT +G
Sbjct: 76 NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGV 135
Query: 127 IVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDV 186
V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+
Sbjct: 136 KVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDI 195
Query: 187 FNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
F GI D A ++ + L ++ A +Q+ KLY LF + D T +EV+
Sbjct: 196 FEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVN 243
>sp|Q9YI36|SUCB2_COLLI Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
(Fragment) OS=Columba livia GN=SUCLG2 PE=1 SV=1
Length = 391
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 32 EYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSG 91
EYQ ++MA +G+ V + S ++ +A Q KE+V+K+QILAGGRG G F SG
Sbjct: 1 EYQSKKIMADHGVTVQRFFVADSANDALEAAQRL--KAKEIVLKAQILAGGRGKGVFNSG 58
Query: 92 LKGGVHIVKKEE-VEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLD 150
LKGGVH+ K + VE LA +M+G L TKQT G V KV + E L++ E YFAI++D
Sbjct: 59 LKGGVHLTKDPKIVEQLAKQMIGYNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILMD 118
Query: 151 RKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRN 210
R GP+++G +GG IE++A P +I K ID+F GI D A ++ L K +
Sbjct: 119 RACNGPVMVGSPQGGVDIEEVAVTSPELIFKEEIDIFEGIKDHQALQMAKNLGFKGPLQQ 178
Query: 211 DAIEQVKKLYKLFCESDCTLLEVS 234
A +Q+KKLY LF + D T +EV+
Sbjct: 179 QAADQIKKLYNLFLKIDATQVEVN 202
>sp|B1ZP17|SUCC_OPITP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae
(strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1
Length = 393
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L K+G+ VPKG + +E A+ P+ +VVKSQI AGGRG GT
Sbjct: 1 MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQ-LPEGM-IVVKSQIHAGGRGKGT 58
Query: 88 FKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146
F G KGGV + K K E + AGKMLG LVT QTGP G+ V +Y + E Y A
Sbjct: 59 FTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYLA 118
Query: 147 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKV 206
I+LDR T+ P+I+ ++GG IE +A P+ I KV +D G+ D ++V L
Sbjct: 119 ILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFTA 178
Query: 207 ADRNDAIEQVKKLYKLFCESDCTLLEVS 234
A+ +A + ++ LY+ F E+D +++EV+
Sbjct: 179 AEGKNASKLIRALYRCFWENDASMVEVN 206
>sp|P53588|SUCB1_CAEEL Probable succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial OS=Caenorhabditis elegans GN=F47B10.1 PE=3
SV=1
Length = 435
Score = 155 bits (392), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 134/227 (59%), Gaps = 13/227 (5%)
Query: 14 LTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKEL- 72
L + ++ R L +HE+ G +++ Y I VP VA E AF + K +
Sbjct: 10 LNTSQKFMAPAARTLMLHEHHGMKILQNYEIKVPP-FGVAQDAET------AFSEAKRIG 62
Query: 73 ----VVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKI 127
VVK+Q+LAGGRG G F SGL+GGV IV +EV+ AG M+G L+TKQT +GK
Sbjct: 63 GKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKK 122
Query: 128 VSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVF 187
+V +C++L E YF+I LDR T GPI+I S+GG +IE++A P+ IVK+PIDV
Sbjct: 123 CEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVN 182
Query: 188 NGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
GIT E A ++ + A E ++KLY++F SD TL+E++
Sbjct: 183 VGITKELAHEIAVKMGFSKDCEQQASEIIEKLYQMFKGSDATLVEIN 229
>sp|O94415|SUCB_SCHPO Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC1620.08 PE=3 SV=1
Length = 433
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 134/226 (59%), Gaps = 3/226 (1%)
Query: 24 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGR 83
Q R L +HEY +++ K+G++VP+G S +E +K +D +LVVK+Q+LAGGR
Sbjct: 19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDL--KVTDLVVKAQVLAGGR 76
Query: 84 GLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
G G F SGL+GGV V E A +M+G L+T+QTGP GKI + VY+CE+ + E
Sbjct: 77 GKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKE 136
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
YFAI++DR+ P+I+ +GG IE +A + P+ I+K + + A ++VD L
Sbjct: 137 YYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKL 196
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVSMNFYISLVLLICMS 248
+ + A++ + KLYK+F + D T +E++ + ++CM
Sbjct: 197 GFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVLCMD 242
>sp|A6WXE8|SUCC_OCHA4 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum
anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168)
GN=sucC PE=3 SV=1
Length = 398
Score = 154 bits (388), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTGP GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA+K+ D L
Sbjct: 119 YLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGQAREDGVKLFPILYKAFTEKDMSLLEIN 209
>sp|P66868|SUCC_BRUSU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis
biovar 1 (strain 1330) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|B0CIT0|SUCC_BRUSI Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|A5VSQ3|SUCC_BRUO2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella ovis
(strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucC PE=3
SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|P66867|SUCC_BRUME Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|C0RFH1|SUCC_BRUMB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella
melitensis biotype 2 (strain ATCC 23457) GN=sucC PE=3
SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|A9M8R2|SUCC_BRUC2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|Q57AX2|SUCC_BRUAB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus
biovar 1 (strain 9-941) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|B2S880|SUCC_BRUA1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus
(strain S19) GN=sucC PE=3 SV=1
Length = 398
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG + G+AV SV++ ++ + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAK-TLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+
Sbjct: 59 FKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L
Sbjct: 119 YLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D ++ LYK F E D +LLE++
Sbjct: 179 LEGGAREDGLKLFPILYKAFTEKDMSLLEIN 209
>sp|A9IZV3|SUCC_BART1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella
tribocorum (strain CIP 105476 / IBS 506) GN=sucC PE=3
SV=1
Length = 398
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKK-AIQDAFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ +YG + G+AV S+++ +K A + P + VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLY---VVKSQIHAGGRGKG 57
Query: 87 TFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK KGGV + + EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E
Sbjct: 58 QFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y ++++DR + ++GG IE +AE+ P I +PIDV G+T D A++ D L
Sbjct: 118 LYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D + LYK FCE D +LLE++
Sbjct: 178 ELHDSAREDGEKLFPILYKAFCEKDMSLLEIN 209
>sp|Q2W063|SUCC_MAGSA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3
SV=1
Length = 398
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 126/211 (59%), Gaps = 7/211 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLG 86
+NIHEYQG +++AKYG+ V KG + DE + +D P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDLGGP---VWVVKSQIHAGGRGAG 57
Query: 87 TFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK+ KGGV + K EEV+ +MLGQ+L+TKQTGP GK V +VY+ + + E+
Sbjct: 58 RFKNDPNGKGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKREL 117
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y ++++DR T I+ ++GG IE++A +P I+KV ID G ++ GL
Sbjct: 118 YLSMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLG 177
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ N ++ V LYK F + DC+++E++
Sbjct: 178 LEGKQVNTCVKFVGALYKAFMDLDCSIVEIN 208
>sp|B2UMH5|SUCC_AKKM8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia
muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1
Length = 393
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/208 (41%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ +L ++G+ PKG+A ++ E + ++ + VVK+Q+ AGGRG GT
Sbjct: 1 MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNM--GLSQYVVKAQVHAGGRGKGT 58
Query: 88 FKSGLKGGVHIVKKEEVEDL-AGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146
FK+G KGGVH+VK E + AGKML Q+LVTKQTG GK+VSK+ + E + L E YFA
Sbjct: 59 FKNGFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFA 118
Query: 147 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKV 206
I+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L
Sbjct: 119 ILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTG 178
Query: 207 ADRNDAIEQVKKLYKLFCESDCTLLEVS 234
A + + +YKLF DC+L+E++
Sbjct: 179 PLLRQATKLITNVYKLFTALDCSLVEIN 206
>sp|Q6G1M1|SUCC_BARHE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella
henselae (strain ATCC 49882 / Houston 1) GN=sucC PE=3
SV=1
Length = 398
Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKK-AIQDAFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ +YG + G+AV SV++ +K A + P + VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKLPGPLY---VVKSQIHAGGRGKG 57
Query: 87 TFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E
Sbjct: 58 KFKELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y ++++DR + ++GG IE +AE+ P I+ +PI+ G+T D A++ D L
Sbjct: 118 LYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ R D + LYK FCE D +LLE++
Sbjct: 178 DLHDSAREDGEKLFPILYKAFCEKDMSLLEIN 209
>sp|A1UQV9|SUCC_BARBK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella
bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3
SV=1
Length = 398
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKK-AIQDAFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ +YG V G+AV SV++ +K A + P + VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKLPGPLY---VVKSQIHAGGRGKG 57
Query: 87 TFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK S KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + ++ E
Sbjct: 58 NFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y ++++DR T + ++GG IE +A + P I + ID G+TD D K+ D L
Sbjct: 118 LYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDEL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
R D + LYK FCE D +LLE++
Sbjct: 178 NLSGNAREDGEKLFPILYKAFCEKDMSLLEIN 209
>sp|Q6FYD1|SUCC_BARQU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella
quintana (strain Toulouse) GN=sucC PE=3 SV=1
Length = 398
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 124/212 (58%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKK-AIQDAFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ +YG + G+AV S+++ +K A + P + VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLY---VVKSQIHAGGRGKG 57
Query: 87 TFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E
Sbjct: 58 KFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y ++++DR + +GG IE +AE+ P I+ +P+D G+T D ++ D L
Sbjct: 118 LYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
R D + LYK FCE D +LLE++
Sbjct: 178 ELHDNARKDGEKLFPILYKAFCEKDMSLLEIN 209
>sp|A1AZH7|SUCC_PARDP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus
denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1
Length = 397
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ +YG V G V DE K A + D VVK+QI AGGRG G
Sbjct: 1 MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGEL--DGPLWVVKAQIHAGGRGKGH 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK +G KGGV + K EE E+LA +MLG+ LVT QTG GK V+++Y+ + + E+
Sbjct: 59 FKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIEREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L
Sbjct: 119 YLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALG 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
A + VK LY++F E D +LE++
Sbjct: 179 LSGAQVKQCVALVKNLYRMFIEKDMEMLEIN 209
>sp|P53589|SUCB2_CAEEL Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=3
SV=1
Length = 415
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 5/216 (2%)
Query: 22 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAG 81
+ Q R LN+ E+Q E++ K+G +V + VAS + + +F DH E VVK+QILAG
Sbjct: 14 KSQRRFLNLQEFQSKEILEKHGCSV-QNFVVASNRKEAEEKWMSFGDH-EYVVKAQILAG 71
Query: 82 GRGLGTFKSGLKG--GVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLS 138
GRG G F +G KG GV I K+++ + +M+G+ LVTKQT +G V KV + E +
Sbjct: 72 GRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVD 131
Query: 139 LVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV 198
+ E Y A+++DR++ GP+++ GG IE +AEK P I K PID+ G+T+ + K+
Sbjct: 132 IKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKI 191
Query: 199 VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
L + A +++K+LY LF D T +E++
Sbjct: 192 AKDLQFEGKLIGVAAQEIKRLYDLFIAVDATQVEIN 227
>sp|Q11CV8|SUCC_MESSB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp.
(strain BNC1) GN=sucC PE=3 SV=1
Length = 397
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 120/211 (56%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ EL+ YG V +G+A+ + E + A + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKELLRGYGAPVAQGVAIFTSGEAEAAAK-KLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK KGGV + K EEV A +MLG LVTKQTGP+GK V+++Y+ + + E+
Sbjct: 59 FKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQVNRLYIEDGADIAREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR P + ++GG IE +AE+ P I+ + I G+T++D K+ L
Sbjct: 119 YLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPERGVTNDDVTKLNAALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
A D LYK F E D +LLEV+
Sbjct: 179 LDGAAAKDGETLFPILYKAFTEKDMSLLEVN 209
>sp|B9JCF4|SUCC_AGRRK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium
radiobacter (strain K84 / ATCC BAA-868) GN=sucC PE=3
SV=1
Length = 397
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ +G V G+A+ S DE + A + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKALLKSFGAPVADGVAIFSADEAEAAAKQ-LP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK KGGV + K E+V + MLG LVTKQTGP GK V+++Y+ + + E+
Sbjct: 59 FKELSPDAKGGVRLAKSIEDVVANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR + ++GG IE +A P I+ V ID G+T D+ + D L
Sbjct: 119 YLSILVDRSVGQVAFVVSTEGGMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ A R D + LYK F E D LLEV+
Sbjct: 179 LEGAAREDGAKLFPILYKAFVEKDMALLEVN 209
>sp|B9KNB3|SUCC_RHOSK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter
sphaeroides (strain KD131 / KCTC 12085) GN=sucC PE=3
SV=1
Length = 397
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ YG V G V DE K A + P VVK+QI AGGRG G
Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGP---LWVVKAQIHAGGRGKG 57
Query: 87 TFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E
Sbjct: 58 KFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L
Sbjct: 118 LYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ A ++ VK LY+ F E D +LE++
Sbjct: 178 GLEGAQVKQCVQLVKNLYRAFVEKDMEMLEIN 209
>sp|Q3IZ84|SUCC_RHOS4 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=sucC PE=3 SV=1
Length = 397
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ YG V G V DE K A + P VVK+QI AGGRG G
Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGP---LWVVKAQIHAGGRGKG 57
Query: 87 TFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E
Sbjct: 58 KFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L
Sbjct: 118 LYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ A ++ VK LY+ F E D +LE++
Sbjct: 178 GLEGAQVKQCVQLVKNLYRAFVEKDMEMLEIN 209
>sp|A3PN13|SUCC_RHOS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=sucC PE=3
SV=1
Length = 397
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ YG V G V DE K A + P VVK+QI AGGRG G
Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGP---LWVVKAQIHAGGRGKG 57
Query: 87 TFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E
Sbjct: 58 KFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L
Sbjct: 118 LYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ A ++ VK LY+ F E D +LE++
Sbjct: 178 GLEGAQVKQCVQLVKNLYRAFVEKDMEMLEIN 209
>sp|B6IP72|SUCC_RHOCS Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum
centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1
Length = 398
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 122/215 (56%), Gaps = 15/215 (6%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKEL-----VVKSQILAGG 82
+NIHEYQ L+ KYG+ VP+G +++E + KEL VVKSQI AGG
Sbjct: 1 MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVA-------KELGGPVWVVKSQIHAGG 53
Query: 83 RGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSL 139
RG G FK KGGV +VK ++V MLG++LVTKQTGP+GK V ++Y+ E +
Sbjct: 54 RGAGRFKDDPNGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADI 113
Query: 140 VNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV 199
E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV
Sbjct: 114 KRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVA 173
Query: 200 DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
L + + + +YK F + D +L+EV+
Sbjct: 174 FALGLEGKQVGACTKFLLGMYKAFTDLDMSLVEVN 208
>sp|A4WNM6|SUCC_RHOS5 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter
sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=sucC PE=3
SV=1
Length = 397
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 8/212 (3%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLG 86
+NIHEYQ L+ YG V G V DE K A + P VVK+QI AGGRG G
Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGELGGP---LWVVKAQIHAGGRGKG 57
Query: 87 TFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNE 142
FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E
Sbjct: 58 KFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARE 117
Query: 143 MYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGL 202
+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L
Sbjct: 118 LYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFAL 177
Query: 203 APKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
+ A ++ VK LY+ F E D +LE++
Sbjct: 178 GLEGAQVKQCVQLVKNLYRAFVEKDMEMLEIN 209
>sp|A6TKJ3|SUCC_ALKMQ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus
metalliredigens (strain QYMF) GN=sucC PE=3 SV=1
Length = 397
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 125/209 (59%), Gaps = 12/209 (5%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELV-VKSQILAGGRGLG 86
+NIHEYQG E+M +YGI+VP+ +V+E A+Q A E++ VK+QI AGGRG
Sbjct: 1 MNIHEYQGKEIMKQYGISVPRSRITFTVEE---AVQAAIDLGCEVIAVKAQIHAGGRGKA 57
Query: 87 TFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYF 145
GGV I + EE + A +L +IL+TKQTGP+GK+V++V + E L + E Y
Sbjct: 58 -------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYL 110
Query: 146 AIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPK 205
+ +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ +
Sbjct: 111 SCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGIN 170
Query: 206 VADRNDAIEQVKKLYKLFCESDCTLLEVS 234
A +A + + +Y+LF E DC+++E++
Sbjct: 171 EACLQEAAQCIMNIYRLFMEKDCSMVEIN 199
>sp|Q68WU5|SUCC_RICTY Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucC PE=3 SV=1
Length = 386
Score = 134 bits (337), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 122/221 (55%), Gaps = 13/221 (5%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ E++ KYG+ GL V +++ +AI + K VVK+QI AGGRG
Sbjct: 1 MNIHEYQAKEILRKYGVPTSTGLVVTKTEKINEAIDKL--NTKVYVVKAQIHAGGRGKA- 57
Query: 88 FKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146
GGV +VK KEE + +A M G LVT QTGPQG+ V+ +Y+ ++ E YF+
Sbjct: 58 ------GGVKVVKSKEEAKKVAHDMFGINLVTHQTGPQGQKVNHLYIESGCDILKEYYFS 111
Query: 147 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKV 206
I+ DR + I ++GG IE +AEK P I+K +D G+ D + GL K
Sbjct: 112 IVFDRSASCITFIASTEGGVDIEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYGLGFKD 171
Query: 207 ADRNDAIEQVKKLYKLFCESDCTLLEVS---MNFYISLVLL 244
+ E VK +Y F E+D T +E++ +N Y +L+ L
Sbjct: 172 SQAKQMKEIVKSVYNAFIETDATQIEINPLIINSYKNLLAL 212
>sp|A6UDP2|SUCC_SINMW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium
medicae (strain WSM419) GN=sucC PE=3 SV=1
Length = 398
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 119/211 (56%), Gaps = 6/211 (2%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+NIHEYQ L+ YG V +G+A+ S DE A + P VVKSQI AGGRG G
Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAK-KLP-GPLYVVKSQIHAGGRGKGK 58
Query: 88 FK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEM 143
FK + KGGV + K +EV A +MLG LVTKQTGP GK V+++Y+ + + E+
Sbjct: 59 FKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDREL 118
Query: 144 YFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA 203
Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L
Sbjct: 119 YLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALK 178
Query: 204 PKVADRNDAIEQVKKLYKLFCESDCTLLEVS 234
R DA + LYK F E D +LLEV+
Sbjct: 179 LDGEARADAEKLFPILYKAFVEKDMSLLEVN 209
>sp|B1YIL7|SUCC_EXIS2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=sucC PE=3 SV=1
Length = 386
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 10/208 (4%)
Query: 28 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGT 87
+N+HEYQ EL+ YG+ VP G+A +V+E A + K VVK+QI AGGRG
Sbjct: 1 MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIK--VVKAQIHAGGRGKA- 57
Query: 88 FKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFA 146
GGV + K +EEV++ A ++LG+ LVT QTGP+GK++ ++ + E ++ E Y
Sbjct: 58 ------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYLG 111
Query: 147 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKV 206
I+LDR T +I+G S+GG IE++AE P I+K +D G+ A K+ + V
Sbjct: 112 IVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKLAFAMGVPV 171
Query: 207 ADRNDAIEQVKKLYKLFCESDCTLLEVS 234
N + V KLY F + DC++ E++
Sbjct: 172 KLVNKFVGMVTKLYTFFVDKDCSIAEIN 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.141 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,068,102
Number of Sequences: 539616
Number of extensions: 4287683
Number of successful extensions: 16021
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 14295
Number of HSP's gapped (non-prelim): 614
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)