Your job contains 1 sequence.
>022649
MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL
GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPA
APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV
DYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTE
RQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPPP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022649
(294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 812 6.6e-81 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 745 8.4e-74 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 470 8.7e-49 2
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 322 5.6e-29 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 296 9.1e-29 2
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 312 7.7e-28 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 307 2.2e-27 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 307 7.0e-27 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 302 7.3e-27 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 302 7.3e-27 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 123 1.8e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 115 3.9e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 113 6.3e-05 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 112 7.0e-05 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 117 8.1e-05 2
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 118 0.00014 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 114 0.00017 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 117 0.00024 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 108 0.00043 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 103 0.00055 2
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 111 0.00070 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 112 0.00079 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 111 0.00082 1
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 178/308 (57%), Positives = 204/308 (66%)
Query: 2 ANNPNEASS----TDDFLEQILGIPNFXXXXXXXXXXXXXXXXXX--PMMLQLSSGDGSS 55
+NNP++ S +DDF EQILG+PNF PMMLQL SG+ S
Sbjct: 3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGS 62
Query: 56 HISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNV 108
H+ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V
Sbjct: 63 HMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPV 122
Query: 109 FHGQXXXXXXXXXXXXXXXXX-XXXXXXXXXTDPHSXXXXXXXXXXXXXXXXXQELVPSV 167
FHGQ TDPHS QELVP+V
Sbjct: 123 FHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS-VEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLVT D+PLSS VEDE+GEG R
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT-DMPLSSSVEDETGEGGR 241
Query: 227 N-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++
Sbjct: 242 TPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
Query: 286 VKPETNPP 293
VKPE NPP
Sbjct: 302 VKPENNPP 309
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 175/313 (55%), Positives = 201/313 (64%)
Query: 1 MANNPN-------EASSTDDFLEQILGIPNFXXXXXXXXXXXXXXXXXXPMMLQLSSG-D 52
MANN N + S TDDF EQILG+ NF PMMLQL SG +
Sbjct: 1 MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPP-PMMLQLGSGNE 59
Query: 53 GS-SHISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HA 104
G+ +H+ A+GGG G+H Q+FPLGLSL+QGKG GFLKP+E +GKRF ++ +
Sbjct: 60 GNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVLDNRCSS 116
Query: 105 IKNVFHGQXXXXXXXXXXXXXXXXX-XXXXXXXXXTDPHSXXXXXXXXXXXXXXXXXQEL 163
+K +FHGQ TDPHS QEL
Sbjct: 117 MKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQEL 176
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS-VEDESG 222
VP+VNKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLVT ++PLSS VEDE+
Sbjct: 177 VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT-EMPLSSSVEDET- 234
Query: 223 EGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE- 281
Q WEKWSNDGTERQVAKLMEENVGAAMQ LQSKALCIMPISLA AIYHSQPP+
Sbjct: 235 -----QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDT 289
Query: 282 SPNLVKPETNPPP 294
S ++VKPE NPPP
Sbjct: 290 SSSIVKPEMNPPP 302
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 470 (170.5 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 100/155 (64%), Positives = 112/155 (72%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDPHS QELVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+
Sbjct: 141 TDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRL 200
Query: 199 GAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFL 258
G GAVA LV D+PLS V+ E+ + NQ WEKWS DGTERQVAKLMEE++GAAMQFL
Sbjct: 201 GGAGAVAQLVA-DIPLS-VKGEASDSGGNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFL 258
Query: 259 QSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
QSKALC+MPISLA AIY +Q + VK E N P
Sbjct: 259 QSKALCMMPISLAMAIYDTQQTQDGQPVKHEPNTP 293
Score = 56 (24.8 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 20/45 (44%), Positives = 23/45 (51%)
Query: 54 SSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKR 98
SS A GG ++G Q F L LSL+ EASGSGKR
Sbjct: 25 SSFPGAAPGGRAAG--DQPFSLALSLDAAAAA-----EASGSGKR 62
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 100/258 (38%), Positives = 127/258 (49%)
Query: 44 MMLQLSSGDGSSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEH 103
MM+ L+ DGSS + AL G S G + P + QG GG L ++ + P+
Sbjct: 67 MMMPLN--DGSS-VHALYNGFSVA--GSL-P-NFQIPQGSGGGLMNQQGQTQTQTQPQAS 119
Query: 104 AIKNVFHGQXXXXXXXXXXXXXXXXXXXXXXXXXXTDPHSXXXXXXXXXXXXXXXXXQEL 163
A TDPHS QEL
Sbjct: 120 A---------STATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQEL 170
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGE 223
VP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G +V+ ++ + S S
Sbjct: 171 VPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQIS-EAGGSHGNASSAM 229
Query: 224 GVRNQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIY----H 276
+Q A SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI H
Sbjct: 230 VGGSQTAGN--SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCH 287
Query: 277 SQPPESPNLVKPETNPPP 294
S+ P P V P P
Sbjct: 288 SRNPLIPGAVADVGGPSP 305
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 296 (109.3 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 81/162 (50%), Positives = 96/162 (59%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNK---TDRAAMLDEIVDYVKFLRLQVK---- 191
TDPHS QELVP+ NK TD+A+MLDEI+DYVKFL+LQVK
Sbjct: 258 TDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKASTY 317
Query: 192 ------VLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQ 242
VLSMSR+G AVAPLV D+ S E G G N A +D TE+Q
Sbjct: 318 TKLLIHVLSMSRLGGAAAVAPLVA-DM---SSEGRGG-GAANGGAPAAAGSDSLTVTEQQ 372
Query: 243 VAKLMEENVGAAMQFLQSKALCIMPISLATAIY----HSQPP 280
VAKLMEE++G AMQ+LQ K LC+MPISLA+AI H +PP
Sbjct: 373 VAKLMEEDMGTAMQYLQGKGLCLMPISLASAISSATCHLRPP 414
Score = 48 (22.0 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 22/57 (38%), Positives = 25/57 (43%)
Query: 44 MMLQLSSGDGSSHISALGGGVSSGYHGQVFPLGLSLEQGKGG----FLKPEEASGSG 96
MMLQ G G S GGG G G + PL L G GG LK A+ +G
Sbjct: 125 MMLQ---GLGGR--SPAGGGGGGGDGGLLLPLTLG-SGGSGGDVQALLKAAAANSAG 175
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 312 (114.9 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 72/123 (58%), Positives = 87/123 (70%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS---- 216
QELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AVAPLV S+
Sbjct: 264 QELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVANMSSESNGNGN 323
Query: 217 VEDESGEGVRNQPAWEKWSNDG-----TERQVAKLMEENVGAAMQFLQSKALCIMPISLA 271
SG G + +N G TE+QVAKLMEE++G+AMQ+LQ K LC+MPISLA
Sbjct: 324 ATSSSGNGEAANGSSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLA 383
Query: 272 TAI 274
TAI
Sbjct: 384 TAI 386
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 74/155 (47%), Positives = 92/155 (59%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDPHS QELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+
Sbjct: 138 TDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 197
Query: 199 GAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFL 258
G + + ++ D S E+ S G TE QVAKLMEE++G+AMQ+L
Sbjct: 198 GGAASASSQISEDAG-GSHENTSSSGEAKM----------TEHQVAKLMEEDMGSAMQYL 246
Query: 259 QSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
Q K LC+MPISLAT I + P VK +T P
Sbjct: 247 QGKGLCLMPISLATTISTATCPSRSPFVK-DTGVP 280
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 307 (113.1 bits), Expect = 7.0e-27, P = 7.0e-27
Identities = 79/166 (47%), Positives = 102/166 (61%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDPHS QELVP+ NKT++A+MLDEI+DYVKFL+LQVKVLSMSR+
Sbjct: 322 TDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLSMSRL 381
Query: 199 GAPGAVAPLVT---TDLP-------LSSVEDESGEGV--RNQPAWEKWSNDGT---ERQV 243
GA AV PL+T T+ P SS E ++G G P + DG E++V
Sbjct: 382 GAAEAVVPLLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPELLDGGAMFEQEV 441
Query: 244 AKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPE 289
KLME+N+ AMQ+LQSK LC+MP++LA+AI +Q S V+PE
Sbjct: 442 VKLMEDNMTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 70/154 (45%), Positives = 94/154 (61%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDPHS Q LVP+ NK D+A+MLDEI+DYVKFL+LQVKVLSMSR+
Sbjct: 247 TDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRL 306
Query: 199 GAPGAVAPLVT-TDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVAKLMEENVGAAM 255
GAPGAV PL+ + S S + P S D + E++V KLME ++ +AM
Sbjct: 307 GAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVVKLMETSIISAM 366
Query: 256 QFLQSKALCIMPISLATAIYHSQPPESPNLVKPE 289
Q+LQ+K LC+MPI+LA+AI + + + + PE
Sbjct: 367 QYLQNKGLCLMPIALASAISNQKGMAAAAAIPPE 400
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 73/157 (46%), Positives = 95/157 (60%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDPHS QELVP+ NKTD+A+MLDEI++YV+FL+LQVKVLSMSR+
Sbjct: 107 TDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRL 166
Query: 199 GAPGAVAPLVT-----TDLPLSSVEDE-SG-EGVRNQPAWEKWSNDGTERQVAKLMEENV 251
G G+V P + L+++ +G G N S TE++VAKLMEE++
Sbjct: 167 GGAGSVGPRLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDM 226
Query: 252 GAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
G+AMQ+LQ K LC+MPISLATAI S +L P
Sbjct: 227 GSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNP 263
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 123 (48.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/153 (28%), Positives = 60/153 (39%)
Query: 59 ALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGS-GKRFPEEHAIKNVFHGQXXXXX 117
A GGG +G G+ F GL GG + PE A+ + R ++ A + Q
Sbjct: 130 ATGGGGGAG--GRQF--GLLFPSTSGGGVSPERAAPAPAPRGSQKRA--HAESSQAMSPS 183
Query: 118 XXXXXXXXXXXXXXXXXXXXXTDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLD 177
DP S QELVP+ K D ML+
Sbjct: 184 KKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLE 243
Query: 178 EIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
+ + YVKFL+LQVKVL+ A G AP ++
Sbjct: 244 KAISYVKFLQLQVKVLATDEFWPAQGGKAPEIS 276
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 115 (45.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 23/40 (57%), Positives = 35/40 (87%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGA 200
Q+LVP+ +KTD+A+MLDE++DY+K L+ QV+V MSR+G+
Sbjct: 25 QKLVPNSSKTDKASMLDEVIDYLKQLQAQVQV--MSRMGS 62
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 113 (44.8 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 20/35 (57%), Positives = 31/35 (88%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
QEL+P+ NK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 336 QELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 370
Score = 49 (22.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 263 LCIMPISLATAIYHSQ-PP 280
LCI P+ L TA+ H Q PP
Sbjct: 374 LCIPPMLLPTAMQHLQIPP 392
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 112 (44.5 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAP 206
QEL+P+ KTD+ +MLDE +DY+K L+LQ+++L M + AP V P
Sbjct: 37 QELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAP-VVPP 81
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 117 (46.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTD---LPLSSV 217
Q+LVP+ +KTD+A+MLDE+++Y+K +LQ +V MSR+ P + P+ L +S +
Sbjct: 237 QKLVPNSSKTDKASMLDEVIEYLK--QLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLM 294
Query: 218 EDESGEGV 225
+ G G+
Sbjct: 295 SNPMGLGM 302
Score = 39 (18.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 227 NQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLV 286
N P+W+ SND R + L+ + + A + ++ + S +Y + P
Sbjct: 340 NCPSWDASSNDS--RFQSPLIPDPMSAFLA-CSTQPTTMEAYSRMATLYQQMQQQLP--- 393
Query: 287 KPETNP 292
P +NP
Sbjct: 394 -PPSNP 398
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM-SRVGAPGAVAPLV 208
QEL+P +KTD+A++LDE +DY+K L+LQ++V+ M S + A A AP++
Sbjct: 281 QELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMM 329
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/35 (60%), Positives = 31/35 (88%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
Q L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 127 QSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 161
Score = 36 (17.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 75 LGLSLEQGKGGFLKPEEASGSGKR 98
LG + GG +PE A+G+ R
Sbjct: 71 LGGFCDSEAGGSSEPEAAAGARPR 94
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 20/36 (55%), Positives = 32/36 (88%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 196
QEL+P+ NK D+A+MLDE ++Y+K L+LQV+++SM+
Sbjct: 367 QELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 108 (43.1 bits), Expect = 0.00043, P = 0.00043
Identities = 21/40 (52%), Positives = 34/40 (85%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS-MSRVG 199
Q+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L+ M+ +G
Sbjct: 117 QKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 26/68 (38%), Positives = 31/68 (45%)
Query: 139 TDPHSXXXXXXXXXXXXXXXXXQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
TDP S Q LVP K D A+MLDE + YVKFL+ QV+ S+ R
Sbjct: 159 TDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQ--SLERA 216
Query: 199 GAPGAVAP 206
A P
Sbjct: 217 AAANGHRP 224
Score = 40 (19.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 54 SSHISALGGGVSSGYHGQVFPLGLSLEQGKGG 85
+++ +A GGG S YH S G GG
Sbjct: 90 AAYSNAAGGGRGSEYHTTTTTRPASGGGGDGG 121
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 111 (44.1 bits), Expect = 0.00070, P = 0.00070
Identities = 20/35 (57%), Positives = 31/35 (88%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
Q L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 221 QSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 112 (44.5 bits), Expect = 0.00079, P = 0.00079
Identities = 19/35 (54%), Positives = 31/35 (88%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
QEL+P NK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 308 QELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 161 QELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAP 201
QEL+P KTDR++MLD++++YVK L+ Q+++ SM V P
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIP 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.131 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 294 233 0.00086 113 3 11 23 0.37 34
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 602 (64 KB)
Total size of DFA: 176 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.68u 0.12s 18.80t Elapsed: 00:00:01
Total cpu time: 18.68u 0.12s 18.80t Elapsed: 00:00:01
Start: Fri May 10 10:11:48 2013 End: Fri May 10 10:11:49 2013