BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022649
(294 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/304 (79%), Positives = 266/304 (87%), Gaps = 17/304 (5%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAES-GLAASDGGLAAGSPMMLQLSSGDGSSHISA 59
MANNP E + DDFL++ILG+PNF SA++ GL +DG LA +PMMLQLSSGDGS+HI+A
Sbjct: 1 MANNPTEPPA-DDFLQEILGLPNFASADAAGLVGADGALA--TPMMLQLSSGDGSNHITA 57
Query: 60 LGGGVSSG----YHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEE------HAIKNVF 109
LGGG G +HG FPLGLSLEQGKGGFLKPEEASGSGKRF ++ + +KNVF
Sbjct: 58 LGGGGGGGGGAGFHG--FPLGLSLEQGKGGFLKPEEASGSGKRFRDDVVDGRANTVKNVF 115
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
HGQP+P+ + AAPHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK
Sbjct: 116 HGQPMPTTMAAAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 175
Query: 170 TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQP 229
TDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVEDE+GEG RNQP
Sbjct: 176 TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEDETGEGGRNQP 234
Query: 230 AWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPE 289
AWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYH+Q P++ +VKPE
Sbjct: 235 AWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQAPDTSTIVKPE 294
Query: 290 TNPP 293
TNPP
Sbjct: 295 TNPP 298
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/299 (75%), Positives = 262/299 (87%), Gaps = 14/299 (4%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS---PMMLQLSSGDGSSHI 57
MANNP++A + DDFLEQILG+PNF SA+SGL+A+D GLA + PMMLQL+S D ++H+
Sbjct: 1 MANNPSDAPA-DDFLEQILGLPNFASADSGLSAADVGLAGAATQAPMMLQLNSADANAHL 59
Query: 58 SALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEE---HAIKNVFHGQPL 114
+ + +H V+ LGLSL+QGKGGF+KPEEAS SGKRF ++ + KNVFHGQP+
Sbjct: 60 AG------AAFHAPVYQLGLSLDQGKGGFMKPEEASASGKRFRDDVVDNRAKNVFHGQPM 113
Query: 115 PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
P+ +PAAPHPPA+RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA
Sbjct: 114 PTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 173
Query: 175 MLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKW 234
MLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E GEG RN+PAW+KW
Sbjct: 174 MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGGEGARNRPAWDKW 232
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY SQPP++ ++VKPETNPP
Sbjct: 233 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPP 291
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/301 (78%), Positives = 257/301 (85%), Gaps = 10/301 (3%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS----PMMLQLSSGDGSSH 56
MANNP E TDDFL++ILG+PNF SAE+GL +D GLA + PMMLQLSSGDGS H
Sbjct: 1 MANNPTE-PPTDDFLQEILGMPNFASAEAGLVGADAGLAGTASVQAPMMLQLSSGDGSGH 59
Query: 57 ISALGGGVSSGYHGQVFP-LGLSLEQGKGGFLKPEEASGSGKRFPEEHA---IKNVFHGQ 112
ISALGG G G LGLSLEQGKGGFLKPEEASGSG RF ++ ++NVFHGQ
Sbjct: 60 ISALGGAPGGGGAGFHGFPLGLSLEQGKGGFLKPEEASGSGNRFRDDIVDGRVRNVFHGQ 119
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR 172
P+P+ V AA HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR
Sbjct: 120 PMPTTVTAATHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR 179
Query: 173 AAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE 232
AAMLDEIVDYVKFLRLQVK+LSMSR+G GAVAPLV TD+PLS VEDE+GEG RNQ AWE
Sbjct: 180 AAMLDEIVDYVKFLRLQVKILSMSRLGGAGAVAPLV-TDIPLSPVEDETGEGGRNQLAWE 238
Query: 233 KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNP 292
KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPI+LATAIYH+QPP++ +VKPETNP
Sbjct: 239 KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPITLATAIYHTQPPDTTTIVKPETNP 298
Query: 293 P 293
P
Sbjct: 299 P 299
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/299 (74%), Positives = 259/299 (86%), Gaps = 14/299 (4%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAG---SPMMLQLSSGDGSSHI 57
MANNP++A + DDFLEQILG+P F SA+SGL+A+D GLA SPMMLQLSS D ++H+
Sbjct: 1 MANNPSDAPA-DDFLEQILGLPTFASADSGLSAADVGLAGAATQSPMMLQLSSADANAHL 59
Query: 58 SALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEE---HAIKNVFHGQPL 114
+ + +H V+ LGLSLEQGKG F+KP+EAS SGKRF ++ + K+VFHGQP+
Sbjct: 60 AG------ASFHAPVYQLGLSLEQGKGRFMKPDEASASGKRFRDDVVDNRAKHVFHGQPM 113
Query: 115 PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
P+ +PAAPHPPA+RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA
Sbjct: 114 PTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 173
Query: 175 MLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKW 234
MLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E GEG RN+PAW+KW
Sbjct: 174 MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGGEGARNRPAWDKW 232
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY SQPP++ ++VK ET+PP
Sbjct: 233 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKHETSPP 291
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/300 (75%), Positives = 255/300 (85%), Gaps = 11/300 (3%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MANNP++A + DDFLEQILG+P FGS +SGL D GLA +PMMLQL+S D +H
Sbjct: 1 MANNPSDAPAADDFLEQILGLPPFGSGDSGLVGPDIGLAGTAPMMLQLNSADHGNHHHLA 60
Query: 61 GGGVSSGYHGQVFPLGLSLEQGK----GGFLKPEEASGSGKRFPEEHAI---KNVFHGQP 113
GG +H V+ LGLSL+QGK GGFLKPE+ASGSGKRF ++ KNV+HGQP
Sbjct: 61 AGGP---FHAPVYQLGLSLDQGKVVGGGGFLKPEDASGSGKRFRDDVVDGRPKNVYHGQP 117
Query: 114 LPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 173
+ + +PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA
Sbjct: 118 MSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 177
Query: 174 AMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEK 233
AMLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E GEG RN+PAW+K
Sbjct: 178 AMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGGEGARNRPAWDK 236
Query: 234 WSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
WSNDGTE+QVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY SQPP+S ++VKPETNPP
Sbjct: 237 WSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDSSSMVKPETNPP 296
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/299 (75%), Positives = 253/299 (84%), Gaps = 17/299 (5%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA+NP+EA + DDFLEQILGIP + +A+ LAA+D LAA PM+LQL SG+GS HI+
Sbjct: 1 MASNPSEAPA-DDFLEQILGIPTYPAADPNLAANDVNLAA--PMVLQLGSGEGSGHIAG- 56
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEE------HAIKNVFHGQPL 114
GY G +FPLGL LEQGK FLKPE+ASGSGKRF EE +KN FHGQP+
Sbjct: 57 ------GYQGTMFPLGLRLEQGKSSFLKPEDASGSGKRFREEVIDGRASTVKNAFHGQPM 110
Query: 115 PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
+ V AAPHPPA+RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA
Sbjct: 111 QATVAAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 170
Query: 175 MLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKW 234
MLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL+SVE+E+ EG RN+PAWEKW
Sbjct: 171 MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLASVEEEASEGGRNEPAWEKW 229
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLA+AIYHSQ P++ L+KP+TNPP
Sbjct: 230 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQQPDTTPLIKPQTNPP 288
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/319 (72%), Positives = 260/319 (81%), Gaps = 28/319 (8%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS----------------PM 44
MANN ++ + DDFLEQILGIP FGS++ GLA +DGGLA + PM
Sbjct: 1 MANNHSD-TQADDFLEQILGIP-FGSSDQGLAGTDGGLAGAAAAAAAAAAAVAAQGQAPM 58
Query: 45 MLQLSSGDGSSHISALGGGV--SSGYHGQV-FPLGLSLEQGKGGFLKPEEASGSGKRFPE 101
MLQLSSGDG HI+ +G G +G+HG FPLGLSL+QGK GFLK EEASGSGKR+
Sbjct: 59 MLQLSSGDGGGHITTIGSGSVGGTGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCG 118
Query: 102 E------HAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAE 155
E ++KNVF GQ + + + AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAE
Sbjct: 119 EVVDVRASSVKNVFQGQQMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAE 178
Query: 156 RIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLS 215
RIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLS
Sbjct: 179 RIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLS 237
Query: 216 SVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIY 275
SVE+E EG RNQPAW+KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY
Sbjct: 238 SVEEEGSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIY 297
Query: 276 HSQPPESPNLVKPETNPPP 294
H+QPP+S ++VKPE+NPPP
Sbjct: 298 HTQPPDSSSVVKPESNPPP 316
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/298 (74%), Positives = 249/298 (83%), Gaps = 20/298 (6%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MAN+P++ + DDFLEQILG+PNF SA+ A SPMMLQL+SGD +SH+ A
Sbjct: 1 MANHPSD-TPADDFLEQILGLPNFTSADGTDA---------SPMMLQLNSGDAASHLGAG 50
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGG-FLKPEEASGSGKRFPEEHAI---KNVFHGQPLPS 116
GG +H V+ LGLSL+QGKGG FLKP+EASGSGKRF E+ KN FHGQP+P+
Sbjct: 51 GG-----FHAPVYHLGLSLDQGKGGGFLKPDEASGSGKRFREDLVDTRPKNTFHGQPMPT 105
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
VPAAP PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML
Sbjct: 106 TVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 165
Query: 177 DEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSN 236
DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E + RNQPAWEKWSN
Sbjct: 166 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGSDSGRNQPAWEKWSN 224
Query: 237 DGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPPP 294
DGTE+QVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY SQP ++ ++VKPET PPP
Sbjct: 225 DGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPETIPPP 282
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/301 (73%), Positives = 247/301 (82%), Gaps = 23/301 (7%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MAN+P++ + DDFLEQILG+PNF SA+ A SPMMLQL+SGD +SH+ A
Sbjct: 1 MANHPSD-TPADDFLEQILGLPNFTSADGTDA---------SPMMLQLNSGDAASHLGAG 50
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGG-FLKPEEASGSGKRFPEE------HAIKNVFHGQP 113
GG +H V+ LGLSL+QGKGG FLKP+EASGSGKRF E+ FHGQP
Sbjct: 51 GG-----FHAPVYHLGLSLDQGKGGGFLKPDEASGSGKRFREDLVDTRPKNFLQTFHGQP 105
Query: 114 LPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 173
+P+ VPAAP PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA
Sbjct: 106 MPTTVPAAPQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 165
Query: 174 AMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEK 233
AMLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E + RNQPAWEK
Sbjct: 166 AMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGSDSGRNQPAWEK 224
Query: 234 WSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
WSNDGTE+QVAKLMEENVGAAMQFLQSKALCIMPISLA+AIY SQP ++ ++VKPET PP
Sbjct: 225 WSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDNSSIVKPETIPP 284
Query: 294 P 294
P
Sbjct: 285 P 285
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/298 (71%), Positives = 241/298 (80%), Gaps = 29/298 (9%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MAN+P++A + DDFLEQILG+PNF SA+ A+S +PMMLQL+SGD A
Sbjct: 1 MANHPSDAPAADDFLEQILGLPNFASADGTDASS-----LHAPMMLQLNSGD-----LAA 50
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGG-FLKPEEASGSGKRFPEEHAI----KNVFHGQPLP 115
GG +G+H V+ LGLSL+QGKGG FLKP++ASGSG RF E+ + KN FHGQP+P
Sbjct: 51 GG---AGFHSPVYQLGLSLDQGKGGGFLKPDDASGSGNRFREDVVVGARHKNAFHGQPMP 107
Query: 116 SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM 175
+ VP+APHPP MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA M
Sbjct: 108 TTVPSAPHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAVM 167
Query: 176 LDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWS 235
LDEIVDYVKFLRLQVKVLSMSR+G GAVAPL +E GEG RNQPAWEKWS
Sbjct: 168 LDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPL-----------EEGGEGGRNQPAWEKWS 216
Query: 236 NDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
NDGTE+QVAKLMEEN+GAAMQFLQSKALCIMPISLA+AIY SQP E+ ++VKPET+PP
Sbjct: 217 NDGTEKQVAKLMEENIGAAMQFLQSKALCIMPISLASAIYQSQPSENSSIVKPETSPP 274
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/308 (69%), Positives = 245/308 (79%), Gaps = 17/308 (5%)
Query: 3 NNPNEASS----TDDFLEQILGIPNFG--SAESGLAASDGGLAAGSPMMLQLSSGDGSSH 56
NNP+E S +DDF E ILG+PNF SA G PMMLQL SGD SH
Sbjct: 4 NNPHENLSDQTPSDDFFEHILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGDEGSH 63
Query: 57 ISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNVF 109
++ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V+
Sbjct: 64 MAGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVY 123
Query: 110 HGQPLPSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
HGQP+ P P+APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+VN
Sbjct: 124 HGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVN 183
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVRN 227
KTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSVEDE+ +G R
Sbjct: 184 KTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDMPLSSSVEDETSDGGRT 242
Query: 228 -QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLV 286
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AI HSQPP++ ++V
Sbjct: 243 PQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAICHSQPPDTSSVV 302
Query: 287 KPETNPPP 294
KPETNPPP
Sbjct: 303 KPETNPPP 310
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 246/308 (79%), Gaps = 17/308 (5%)
Query: 2 ANNPNEASS----TDDFLEQILGIPNFG--SAESGLAASDGGLAAGSPMMLQLSSGDGSS 55
+NNP++ S +DDF EQILG+PNF SA G PMMLQL SGD S
Sbjct: 3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGDEGS 62
Query: 56 HISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNV 108
+ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V
Sbjct: 63 QMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPV 122
Query: 109 FHGQPLPSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
FHGQP+ P P+APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+V
Sbjct: 123 FHGQPMQQPAPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSVEDE+G+G R
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDMPLSSSVEDETGDGGR 241
Query: 227 N-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++
Sbjct: 242 TPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
Query: 286 VKPETNPP 293
VKPETNPP
Sbjct: 302 VKPETNPP 309
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 246/308 (79%), Gaps = 17/308 (5%)
Query: 2 ANNPNEASS----TDDFLEQILGIPNFG--SAESGLAASDGGLAAGSPMMLQLSSGDGSS 55
+NNP++ S +DDF EQILG+PNF SA G PMMLQL SG+ S
Sbjct: 3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGS 62
Query: 56 HISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNV 108
H+ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V
Sbjct: 63 HMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPV 122
Query: 109 FHGQPLPSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
FHGQP+ P P+APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+V
Sbjct: 123 FHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSVEDE+GEG R
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDMPLSSSVEDETGEGGR 241
Query: 227 N-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++
Sbjct: 242 TPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
Query: 286 VKPETNPP 293
VKPE NPP
Sbjct: 302 VKPENNPP 309
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/308 (70%), Positives = 246/308 (79%), Gaps = 17/308 (5%)
Query: 2 ANNPNEASS----TDDFLEQILGIPNFG--SAESGLAASDGGLAAGSPMMLQLSSGDGSS 55
+NNP++ S +DDF EQILG+PNF SA G PMMLQL SG+ S
Sbjct: 3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGS 62
Query: 56 HISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNV 108
H+ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V
Sbjct: 63 HMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPV 122
Query: 109 FHGQPLPSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
FHGQP+ P P+APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+V
Sbjct: 123 FHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSVEDE+GEG R
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGVGAVAPLV-TDMPLSSSVEDETGEGGR 241
Query: 227 N-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++
Sbjct: 242 TPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
Query: 286 VKPETNPP 293
VKPE NPP
Sbjct: 302 VKPENNPP 309
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 215/308 (69%), Positives = 245/308 (79%), Gaps = 17/308 (5%)
Query: 2 ANNPNEASS----TDDFLEQILGIPNFG--SAESGLAASDGGLAAGSPMMLQLSSGDGSS 55
+NNP++ S +DDF EQILG+PNF SA G PMMLQL SG+ S
Sbjct: 3 SNNPHDNLSDQTPSDDFFEQILGLPNFSASSAAGLSGVDGGLGGGAPPMMLQLGSGEEGS 62
Query: 56 HISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNV 108
H+ LGG +G+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K V
Sbjct: 63 HMGGLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPV 122
Query: 109 FHGQPLPSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
FHGQP+ P P+APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+V
Sbjct: 123 FHGQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTV 182
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSV DE+GEG R
Sbjct: 183 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDMPLSSSVXDETGEGGR 241
Query: 227 N-QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
QPAWEKWSNDGTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++
Sbjct: 242 TPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSV 301
Query: 286 VKPETNPP 293
VKPE NPP
Sbjct: 302 VKPENNPP 309
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 218/296 (73%), Positives = 245/296 (82%), Gaps = 17/296 (5%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MAN+P+EA TDDFLEQILG+ F SA+ AS MMLQL+SGD ++H++A
Sbjct: 1 MANHPSEAP-TDDFLEQILGLSTFASADPAADASP--------MMLQLNSGDAATHLAAT 51
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAI---KNVFHGQPLPSP 117
+ +H + LGLSL+QGKG FL PE+ASGSGKRF ++ KN FHGQP+P+
Sbjct: 52 H---LAAFHAPPYQLGLSLDQGKGPFLTPEDASGSGKRFRDDVVDTRPKNFFHGQPMPTT 108
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
VP APHPPA+RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD
Sbjct: 109 VPTAPHPPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 168
Query: 178 EIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
EIVDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PLSSVE+E GEG RNQPAWEKWSND
Sbjct: 169 EIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDIPLSSVEEEGGEG-RNQPAWEKWSND 226
Query: 238 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
GTERQVAKLMEENVGAAMQFLQSKALCIMP+SLA+AIY SQP + ++VKPETNPP
Sbjct: 227 GTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPSGTSSIVKPETNPP 282
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 225/329 (68%), Gaps = 53/329 (16%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA NP E + DDFLEQIL IP++ + + + GS M+LQLSSGDGS H++
Sbjct: 1 MATNPPEGYA-DDFLEQILAIPSYPGHDPNMVGT------GSTMVLQLSSGDGSGHVA-- 51
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRF--------------------- 99
GG G+ G VFPLGLSLE G + A GSG+RF
Sbjct: 52 -GG---GFQGPVFPLGLSLESG---IPATQVAPGSGERFRDDVDARGSSGRSERESVHLD 104
Query: 100 ---------------PEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSI 144
P + FHGQP P P+ AAPHPPA+RPRVRARRGQATDPHSI
Sbjct: 105 GLFPAYGHVQSLSVRPAVPQVHQAFHGQPTPVPITAAPHPPAIRPRVRARRGQATDPHSI 164
Query: 145 AERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAV 204
AERLRRERIAER++ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAV
Sbjct: 165 AERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAV 224
Query: 205 APLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALC 264
A LV D+PL +VE E+GEG NQ AW+KWSNDGTER+VAKLMEE+VGAAMQFLQSKALC
Sbjct: 225 AQLV-ADIPLPAVEGETGEGGSNQQAWDKWSNDGTEREVAKLMEEDVGAAMQFLQSKALC 283
Query: 265 IMPISLATAIYHSQPPESPNLVKPETNPP 293
IMPISLA AIY + ++P L+KPE N P
Sbjct: 284 IMPISLAAAIYPAHQTDTPTLIKPEPNAP 312
>gi|356502774|ref|XP_003520191.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 274
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 206/296 (69%), Positives = 238/296 (80%), Gaps = 26/296 (8%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MAN+P++AS TDDFL+QILG+ F SA++ SPMMLQL+SGD ++H+++
Sbjct: 1 MANHPSQAS-TDDFLDQILGLSTFASADA------------SPMMLQLNSGDAATHLAS- 46
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAI---KNVFHGQPLPSP 117
+H + LGLSL+QGKG FL PE+ASGSGKRF ++ NVF GQP+P+
Sbjct: 47 -------FHAPPYQLGLSLDQGKGPFLTPEDASGSGKRFRDDAVDTRPNNVFDGQPMPTT 99
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
VP APH PA+RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD
Sbjct: 100 VPTAPHLPAVRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 159
Query: 178 EIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
EIVDYVKFLRLQVKV ++ G AVAPLV TD+PLSSVE+E GEG RNQPAWEK SND
Sbjct: 160 EIVDYVKFLRLQVKVNALXXXGGADAVAPLV-TDIPLSSVEEEGGEG-RNQPAWEKCSND 217
Query: 238 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
GTERQVAKLMEENVGAAMQFLQSKALCIMP+SLA+AIY SQP ++ ++VKPE NPP
Sbjct: 218 GTERQVAKLMEENVGAAMQFLQSKALCIMPVSLASAIYQSQPSDTSSIVKPEINPP 273
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 227/350 (64%), Gaps = 71/350 (20%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA NP E TDDFLEQIL IP++ + + + GS M+LQLSSGDGS H++
Sbjct: 1 MATNPAEGY-TDDFLEQILAIPSYPGHDPNMVGT------GSTMVLQLSSGDGSGHVA-- 51
Query: 61 GGGVSSGYHGQVFPLGLSLEQ---------GKGGFLKPE-EASGSGKRFPEEHAIKNVF- 109
GG G+ G VFPLGLSLE G G + + +A GS R E ++ VF
Sbjct: 52 -GG---GFQGPVFPLGLSLESGIPATQVAPGSGERFRDDVDARGSSGRSGEYVTVRGVFR 107
Query: 110 ----------------------------------------------HGQPLPSPVPAAPH 123
HGQP P P+ AAPH
Sbjct: 108 WRIGGFCFSRARTERESVHLDGLFPAYGHVQSLSVRPAVPQVHQAFHGQPTPVPITAAPH 167
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PPA+RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS NKTDRAAMLDEIVDYV
Sbjct: 168 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYV 227
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQV 243
KFLRLQVKVLSMSR+G GAVA LV D+PL +VE E+GEG NQ AW+KWSNDGTER+V
Sbjct: 228 KFLRLQVKVLSMSRLGGAGAVAQLV-ADIPLPAVEGETGEGGSNQQAWDKWSNDGTEREV 286
Query: 244 AKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
AKLMEE+VGAAMQFLQSKALCIMPISLA AIY + ++P L+KPE N P
Sbjct: 287 AKLMEEDVGAAMQFLQSKALCIMPISLAAAIYPAHQTDTPTLIKPEPNAP 336
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 207/315 (65%), Positives = 238/315 (75%), Gaps = 28/315 (8%)
Query: 1 MANNPN------EASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS---PMMLQLSSG 51
MANN N + S +DDF EQILGI NF ++ + G +G PMMLQL SG
Sbjct: 1 MANNNNPHDNLSDQSPSDDFFEQILGISNFSASSGSGLSGLAGGLSGVGPPPMMLQLGSG 60
Query: 52 D--GSSHISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------ 102
D +H+ A+G G G+H Q+FPLGLSL+QGKG GFLKPE GSGKRF ++
Sbjct: 61 DEGNHNHMGAIGAGGPLGFHNQMFPLGLSLDQGKGHGFLKPEGVHGSGKRFQDDVVDNRC 120
Query: 103 HAIKNVFHGQPLPSPVPAAPHP-PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQ 161
++K VFHGQP+ P P PH ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQ
Sbjct: 121 SSMKPVFHGQPMSQPAPPMPHQQSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQ 180
Query: 162 ELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDE 220
ELVP+V+KTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV T++PL SS+EDE
Sbjct: 181 ELVPTVSKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TEMPLSSSIEDE 239
Query: 221 SGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPP 280
+ Q WEKWSNDGTE QVAKLMEENVGAAMQ LQSKALCIMPISLA AIYHSQP
Sbjct: 240 T------QGVWEKWSNDGTELQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPQ 293
Query: 281 E-SPNLVKPETNPPP 294
+ S +++KPE NPPP
Sbjct: 294 DTSSSIIKPEMNPPP 308
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 211/313 (67%), Positives = 241/313 (76%), Gaps = 26/313 (8%)
Query: 1 MANNPN-------EASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS---PMMLQLSS 50
MANN N + S TDDF EQILG+ NF ++ + GG +G PMMLQL S
Sbjct: 1 MANNNNNPHDSISDPSPTDDFFEQILGLSNFSASSGSGLSGIGGGLSGVGPPPMMLQLGS 60
Query: 51 GD--GSSHISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE---HA 104
GD +H+ A+GGG G+H Q+FPLGLSL+QGKG GFLKP+ G+GKRF ++ +
Sbjct: 61 GDEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDGIHGTGKRFQDDVLDNR 120
Query: 105 IKNVFHGQPLPSPVPAAPHPPA-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
+K VFHGQP+ P P PH + +RPRVRARRGQATDPHSIAERLRRERIAERIRALQEL
Sbjct: 121 MKPVFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 180
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESG 222
VP+VNKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV T++PL SS EDE+
Sbjct: 181 VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TEMPLSSSTEDET- 238
Query: 223 EGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE- 281
Q WEKWSNDGTERQVAKLMEENVGAAMQ LQSKALCIMPISLA AIYHSQPP+
Sbjct: 239 -----QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDT 293
Query: 282 SPNLVKPETNPPP 294
S ++VKPE NPPP
Sbjct: 294 SSSIVKPEMNPPP 306
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/236 (77%), Positives = 206/236 (87%), Gaps = 11/236 (4%)
Query: 68 YHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HAIKNVFHGQPLPSPVPA 120
+H Q+FPLGLSL+QGKG GFL+PE GSGKRF ++ ++K VFHGQP+ P P+
Sbjct: 12 FHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQQPPPS 71
Query: 121 APH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEI 179
APH P ++RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP+VNKTDRAAM+DEI
Sbjct: 72 APHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEI 131
Query: 180 VDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVRN-QPAWEKWSND 237
VDYVKFLRLQVKVLSMSR+G GAVAPLV TD+PL SSVEDE+GEG R QPAWEKWSND
Sbjct: 132 VDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TDMPLSSSVEDETGEGGRTPQPAWEKWSND 190
Query: 238 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
GTERQVAKLMEENVGAAMQ LQSKALC+MPISLA AIYHSQPP++ ++VKPE NPP
Sbjct: 191 GTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 246
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/313 (66%), Positives = 239/313 (76%), Gaps = 30/313 (9%)
Query: 1 MANNPN-------EASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGD- 52
MANN N + S TDDF EQILG+ + S SG S G PMMLQL SG+
Sbjct: 1 MANNNNIPHDSISDPSPTDDFFEQILGL-SNFSGSSGSGLSGIGGVGPPPMMLQLGSGNE 59
Query: 53 -GSSHISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEE------HA 104
+H+ A+GGG G+H Q+FPLGLSL+QGKG GFLKP+E +GKRF ++ +
Sbjct: 60 GNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVLDNRCSS 116
Query: 105 IKNVFHGQPLPSPVPAAPHPPA-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
+K +FHGQP+ P P PH + +RPRVRARRGQATDPHSIAERLRRERIAERIR+LQEL
Sbjct: 117 MKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQEL 176
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESG 222
VP+VNKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV T++PL SSVEDE+
Sbjct: 177 VPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TEMPLSSSVEDET- 234
Query: 223 EGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE- 281
Q WEKWSNDGTERQVAKLMEENVGAAMQ LQSKALCIMPISLA AIYHSQPP+
Sbjct: 235 -----QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDT 289
Query: 282 SPNLVKPETNPPP 294
S ++VKPE NPPP
Sbjct: 290 SSSIVKPEMNPPP 302
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 205/309 (66%), Positives = 233/309 (75%), Gaps = 27/309 (8%)
Query: 1 MANNPN-------EASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGD- 52
MANN N + S TDDF EQILG+ + S SG S G PMMLQL SG+
Sbjct: 1 MANNNNIPHDSISDPSPTDDFFEQILGL-SNFSGSSGSGLSGIGGVGPPPMMLQLGSGNE 59
Query: 53 -GSSHISALGGGVSSGYHGQVFPLGLSLEQGKG-GFLKPEEASGSGKRFPEEHAIKNVFH 110
+H+ A+GGG G+H Q+FPLGLSL+QGKG GFLKP+E +GKRF ++ + N
Sbjct: 60 GNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRF-QDDVLDNRCS 115
Query: 111 GQ--PLPSPVPAAPHPPA-MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
P+ P P PH + +RPRVRARRGQATDPHSIAERLRRERIAERIR+LQELVP+V
Sbjct: 116 SMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTV 175
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL-SSVEDESGEGVR 226
NKTDRAAM+DEIVDYVKFLRLQVKVLSMSR+G GAVAPLV T++PL SSVEDE+
Sbjct: 176 NKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV-TEMPLSSSVEDET----- 229
Query: 227 NQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE-SPNL 285
Q WEKWSNDGTERQVAKLMEENVGAAMQ LQSKALCIMPISLA AIYHSQPP+ S ++
Sbjct: 230 -QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSI 288
Query: 286 VKPETNPPP 294
VKPE NPPP
Sbjct: 289 VKPEMNPPP 297
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/323 (55%), Positives = 204/323 (63%), Gaps = 50/323 (15%)
Query: 12 DDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISALGGGVSSGYHGQ 71
DDF EQIL +P++ ++ A DG LA S G G A G +S G
Sbjct: 17 DDFFEQILAVPSY--SDPAFGAHDGNLALASGGGGGGGGGGGGGGGGAASGYMSMGMG-- 72
Query: 72 VFPLGLSLEQGKGGFLKPEEASGSGKR----------------------FPEEHAIK--- 106
PLGL+LE G FLK + SG+ FP ++
Sbjct: 73 -MPLGLNLEHG---FLKARDQSGATNNAAAAASSSCGITERESVHLTNLFPAFGQLQPQS 128
Query: 107 ----------------NVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRR 150
FHGQP S V A PHPPA+RPRVRARRGQATDPHSIAERLRR
Sbjct: 129 LRPSPPAPAPPPPHLPQPFHGQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRR 188
Query: 151 ERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTT 210
ERIAER++ALQELVPS NKTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVA LV
Sbjct: 189 ERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV-A 247
Query: 211 DLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISL 270
D+PL S+E + EG NQ AWEKWS DGTE+QVAKLMEE+VGAAMQFLQSKALCIMPISL
Sbjct: 248 DVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISL 307
Query: 271 ATAIYHSQPPESPNLVKPETNPP 293
A+AI+ + PE LVKPE++ P
Sbjct: 308 ASAIFRTHQPEPSTLVKPESDAP 330
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/315 (55%), Positives = 212/315 (67%), Gaps = 34/315 (10%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA N EA + DDFLEQIL IP++ SGL +D G+P + +S +S +S L
Sbjct: 1 MAANQPEAYA-DDFLEQILAIPSY----SGLPVAD----VGTPS--ETTSFTSASAVSHL 49
Query: 61 GGGVSSGYHGQVFPLGLSLEQGK------GGFLKPEEASG-------SGKRFPEEHAIKN 107
++G +FPLGLSL+ G+ G + E G +G + HA+++
Sbjct: 50 NSAAAAGLQQPLFPLGLSLDNGRDDVSEAGAYAVKHERDGMNIGNLYAGLEHLQSHAVRH 109
Query: 108 ----VFHGQPL-----PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIR 158
+ H QP S PHPP++RPRVRARRGQATDPHSIAERLRRERI+ERI+
Sbjct: 110 SVPSIHHVQPFQGPPTTSTTVTVPHPPSIRPRVRARRGQATDPHSIAERLRRERISERIK 169
Query: 159 ALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
ALQELVPS NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G AVA LV D+PL SVE
Sbjct: 170 ALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQLV-ADIPLQSVE 228
Query: 219 DESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQ 278
+SGE NQ W+KWSN TER+VAKLMEE+VGAAMQ+LQSK+LCIMPISLA IY +Q
Sbjct: 229 GDSGESRSNQHIWDKWSNVDTEREVAKLMEEDVGAAMQYLQSKSLCIMPISLAALIYPTQ 288
Query: 279 PPESPNLVKPETNPP 293
P+ +LVKPE P
Sbjct: 289 LPDDQSLVKPEAAAP 303
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/315 (54%), Positives = 209/315 (66%), Gaps = 35/315 (11%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA N EA + DDFLEQIL IP++G L +D G+P + +S +S +S L
Sbjct: 1 MAANQPEAYA-DDFLEQILAIPSYG-----LPVAD----VGTPS--ETTSFTSASAVSRL 48
Query: 61 GGGVSSGYHGQVFPLGLSLEQGK------GGFLKPEEASG-------SGKRFPEEHAIKN 107
++G +FPLGLSL+ G+ G + E G +G + HA+++
Sbjct: 49 NSAAAAGLQQPMFPLGLSLDNGRDNVSEAGAYAVKHERDGMNIGNLYAGLEHSQSHAVRH 108
Query: 108 ----VFHGQPL-----PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIR 158
V H QP S P PP++RPRVRARRGQATDPHSIAERLRRERI+ERI+
Sbjct: 109 SLPSVHHVQPFQGPPTTSTTVTVPQPPSIRPRVRARRGQATDPHSIAERLRRERISERIK 168
Query: 159 ALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
ALQELVPS NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G AVA LV D+PL SVE
Sbjct: 169 ALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGASAVAQLV-ADIPLQSVE 227
Query: 219 DESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQ 278
+SGE NQ W+KWSN TE++VAKLMEE+VGAAMQ+LQSK+LCIMPISLA IY +Q
Sbjct: 228 GDSGESRSNQRIWDKWSNVDTEQEVAKLMEEDVGAAMQYLQSKSLCIMPISLAALIYPTQ 287
Query: 279 PPESPNLVKPETNPP 293
P+ LVKPE P
Sbjct: 288 QPDDQLLVKPEAAAP 302
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/185 (78%), Positives = 159/185 (85%), Gaps = 1/185 (0%)
Query: 109 FHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
FHGQP S V A PHPPA+RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS N
Sbjct: 77 FHGQPTSSAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSAN 136
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ 228
KTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVA LV D+PL S+E + EG NQ
Sbjct: 137 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLLSIEGDGTEGGSNQ 195
Query: 229 PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
AWEKWS DGTE+QVAKLMEE+VGAAMQFLQSKALCIMPISLA+AI+ + PE LVKP
Sbjct: 196 QAWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQPEPSTLVKP 255
Query: 289 ETNPP 293
E++ P
Sbjct: 256 ESDAP 260
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/186 (77%), Positives = 164/186 (88%), Gaps = 2/186 (1%)
Query: 109 FHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
FHGQP P V AA PPA+RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ N
Sbjct: 141 FHGQPTPGVVSAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTAN 200
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEG-VRN 227
KTDRAAM+DEIVDYVKFLRLQVKVLSMSR+GA GAVA LV D+PL+SVE ES +G N
Sbjct: 201 KTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV-ADVPLASVEGESIDGAAAN 259
Query: 228 QPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVK 287
Q WEKWSNDGTE+QVAKLMEE++GAAMQFLQSKALCIMPISLA+AI + PP++P+++K
Sbjct: 260 QQTWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAILRTHPPDAPSIIK 319
Query: 288 PETNPP 293
PE+N P
Sbjct: 320 PESNTP 325
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/314 (52%), Positives = 205/314 (65%), Gaps = 42/314 (13%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MANN E + DDFLE+IL IP++ S L +D ++AG+ SS + +S
Sbjct: 1 MANNAPEIYAADDFLEKILAIPSYAS----LPVTD--ISAGA------SSENSAS----- 43
Query: 61 GGGVSSGYHGQVFPLGLSLEQG------KGGF-LKPEEA------SGSGKRFPEEHAIK- 106
G+S ++FPLGLSL+ G GGF +K E S SG + HA+
Sbjct: 44 --GISQLQQQRLFPLGLSLDNGFAGANDIGGFQVKTEREAMHMGNSYSGLEHLQSHAVCL 101
Query: 107 --------NVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIR 158
F G P S PH PA+ PRVRARRGQATDPHSIAERLRRERI+ERI+
Sbjct: 102 SVPQVHQVQPFQGHPTSSTTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIK 161
Query: 159 ALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
ALQELVP+ NKTDRAA++DEI+DYVKFLRLQVKVLSMSR+G AVA LV TD+PL SVE
Sbjct: 162 ALQELVPNCNKTDRAALVDEILDYVKFLRLQVKVLSMSRLGGTSAVAQLV-TDIPLQSVE 220
Query: 219 DESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQ 278
+S E NQ WEKWS+ TE++VAKLM E+VG AMQ+LQSK+LCIMP+SLA IY +Q
Sbjct: 221 GDSCESRSNQHVWEKWSDSETEQEVAKLMGEDVGTAMQYLQSKSLCIMPVSLAALIYPTQ 280
Query: 279 PPESPNLVKPETNP 292
+ ++VKP+ P
Sbjct: 281 QTDDQSMVKPDYGP 294
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/182 (76%), Positives = 156/182 (85%), Gaps = 1/182 (0%)
Query: 112 QPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTD 171
QP V A P PP +RPRVRARRGQATDPHSIAERLRR RI ER++ALQELVP+ NKTD
Sbjct: 1 QPTSGAVSAVPQPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTD 60
Query: 172 RAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAW 231
RAAMLDEIVDYVKFLRLQVKVLSMSR+GA GAVA LV D+PLSSV+ E EG NQ AW
Sbjct: 61 RAAMLDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLV-ADVPLSSVQGEGIEGGANQQAW 119
Query: 232 EKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETN 291
E WSNDGTE++VAKLMEE+VGAAMQ LQSKALCIMP+SLA+AI+ ++PP +P LVKPE+N
Sbjct: 120 ENWSNDGTEQEVAKLMEEDVGAAMQLLQSKALCIMPVSLASAIFRARPPNAPTLVKPESN 179
Query: 292 PP 293
PP
Sbjct: 180 PP 181
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Query: 109 FHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
FH Q V A P PP +RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS N
Sbjct: 36 FHNQTNTGTVAAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCN 95
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ 228
KTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVA LV D+PLSSVE E E NQ
Sbjct: 96 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLSSVEGEGIESGNNQ 154
Query: 229 PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
AWEKWS+DGTE+QVAKLMEE+VGAAMQFLQSKALCIMPISLA+AI+ + + LVKP
Sbjct: 155 QAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKP 214
Query: 289 ETNPP 293
E N P
Sbjct: 215 EMNTP 219
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 153/185 (82%), Gaps = 1/185 (0%)
Query: 109 FHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
FH Q V A P PP +RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS N
Sbjct: 135 FHNQTNTGTVAAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCN 194
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ 228
KTDRAAMLDEIVDYVKFLRLQVKVLSMSR+G GAVA LV D+PLSSVE E E NQ
Sbjct: 195 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLSSVEGEGIESGNNQ 253
Query: 229 PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
AWEKWS+DGTE+QVAKLMEE+VGAAMQFLQSKALCIMPISLA+AI+ + + LVKP
Sbjct: 254 QAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKP 313
Query: 289 ETNPP 293
E N P
Sbjct: 314 EMNTP 318
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 270 bits (689), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
V A P PP +RPRVRARRGQATDPHSIAERLRR RI ER++ALQELVP+ NKTDRAAMLD
Sbjct: 3 VSAVPQPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRAAMLD 62
Query: 178 EIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
EIVDYVKFLRLQ+KVLSMSR+GA GAVA LV D+PLSS++ E EG NQ +WE WSND
Sbjct: 63 EIVDYVKFLRLQIKVLSMSRLGAAGAVAQLV-ADVPLSSIKGEGNEGGANQQSWENWSND 121
Query: 238 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
TE++VAKLMEE+VGAAMQFLQSKALCIMPISLA+AI+ ++PP + L+ E+N P
Sbjct: 122 DTEQEVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRARPPNASTLINTESNTP 177
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 150/169 (88%), Gaps = 2/169 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP +RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS+NKTDRAAMLDEIVDYV
Sbjct: 159 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 218
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE-DESGEGVRNQPAWEKWSNDGTERQ 242
KFLRLQVKVLSMSR+G GAVA LV D+PLS+VE D+ EGV N+ AW+KWSNDGTE+Q
Sbjct: 219 KFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLSAVEGDQDIEGVSNEQAWDKWSNDGTEQQ 277
Query: 243 VAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETN 291
VAKLMEE+VGAAMQFLQSKALCIMPISLA++I+ E+ +KPE+N
Sbjct: 278 VAKLMEEDVGAAMQFLQSKALCIMPISLASSIFRMPQSEASTGIKPESN 326
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 151/179 (84%), Gaps = 1/179 (0%)
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR 172
P P+ HPP +RPRVRARRGQATDPHSIAERLRRERIAER+RALQELVPS+NK+DR
Sbjct: 162 PTPASNAHMQHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDR 221
Query: 173 AAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE 232
AAMLDEIVDYVKFLRLQVKVLSMSR+G GAVA LV D+PLS+VE E EG ++ AW
Sbjct: 222 AAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLSAVEGEDIEGGASEQAWS 280
Query: 233 KWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETN 291
KWSNDGTE+QVAKLMEE+VGAAMQFLQSKALCIMPISLA+AI+ E+ +KPE++
Sbjct: 281 KWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSEASTTIKPESD 339
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 148/169 (87%), Gaps = 2/169 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP +RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVPS+NKTDRAAMLDEIVDYV
Sbjct: 162 PPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYV 221
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE-DESGEGVRNQPAWEKWSNDGTERQ 242
KFLRLQVKVLSMSR+G GAVA LV D+PLS+VE D+ EG N+ AW+KWSNDGTE+Q
Sbjct: 222 KFLRLQVKVLSMSRLGGAGAVAQLV-ADVPLSAVEGDQDIEGGANEQAWDKWSNDGTEQQ 280
Query: 243 VAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETN 291
VAKLMEE+VGAAMQFLQSKALCIMPI LA+AI+ E+ +KPE+N
Sbjct: 281 VAKLMEEDVGAAMQFLQSKALCIMPIPLASAIFRMPQSEASTGIKPESN 329
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/296 (54%), Positives = 185/296 (62%), Gaps = 15/296 (5%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISAL 60
MA P DDF +Q + GS A + GG A G S D ++ ++
Sbjct: 1 MAGQPPPQGPEDDFFDQFFSMTAGGSYPG--ATAGGGRAPGDQPFSLALSLDAAAAEASG 58
Query: 61 GGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAI--KNVFHGQ-PLPSP 117
G + G + L G P A G G + P A VFH Q P
Sbjct: 59 SGKHADGGKADREAIQLP------GLFPP--AFGGGVQPPHLRATPPTQVFHAQQPKQGG 110
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP+ NKTDRAAMLD
Sbjct: 111 AAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLD 170
Query: 178 EIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
EI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+ + Q WEKWS D
Sbjct: 171 EILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEASDSGSKQQIWEKWSTD 228
Query: 238 GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
GTERQVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q + VKPE N P
Sbjct: 229 GTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQDGQPVKPEPNTP 284
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
Query: 107 NVFH-GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
VFH Q P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP
Sbjct: 108 QVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVP 167
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGV 225
+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+ +
Sbjct: 168 NTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEASDSG 225
Query: 226 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
NQ WEKWS DGTERQVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 226 GNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQP 285
Query: 286 VKPETNPP 293
VK E N P
Sbjct: 286 VKHEPNTP 293
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
Query: 107 NVFH-GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
VFH Q P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP
Sbjct: 108 QVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVP 167
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGV 225
+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+ +
Sbjct: 168 NTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEASDSG 225
Query: 226 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
NQ WEKWS DGTERQVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 226 GNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQP 285
Query: 286 VKPETNPP 293
VK E N P
Sbjct: 286 VKHEPNTP 293
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
Query: 107 NVFH-GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
VFH Q P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP
Sbjct: 108 QVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVP 167
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGV 225
+ NKTDRAAMLDEI+DYVKFLRLQVKVLS+SR+G GAVA LV D+PL SV+ E+ +
Sbjct: 168 NTNKTDRAAMLDEILDYVKFLRLQVKVLSISRLGGAGAVAQLV-ADIPL-SVKGEASDSG 225
Query: 226 RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNL 285
NQ WEKWS DGTERQVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 226 GNQQIWEKWSTDGTERQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQQTQDGQP 285
Query: 286 VKPETNPP 293
VK E N P
Sbjct: 286 VKHEPNTP 293
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/172 (75%), Positives = 143/172 (83%), Gaps = 2/172 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP+ NKTDRA MLDEI+D
Sbjct: 113 PQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILD 172
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTER 241
YVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+ + Q WEKWS DGTER
Sbjct: 173 YVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEASDSGSKQQIWEKWSTDGTER 230
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETNPP 293
QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q + VKPE N P
Sbjct: 231 QVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQDGQPVKPEPNTP 282
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 153/192 (79%), Gaps = 10/192 (5%)
Query: 108 VFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
+F QP P AP PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP+
Sbjct: 1 MFQAQPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNT 60
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEG--- 224
NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+G+G
Sbjct: 61 NKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEAGDGGGA 118
Query: 225 ---VRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE 281
+ Q WEKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MP+SLA AIY +Q P
Sbjct: 119 PQQQQQQHVWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPVSLAMAIYDTQHPL 178
Query: 282 S--PNLVKPETN 291
+ +KPE N
Sbjct: 179 DGHGHSLKPEPN 190
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/191 (69%), Positives = 151/191 (79%), Gaps = 6/191 (3%)
Query: 107 NVFHGQPLPS----PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQE 162
VFH QP P P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQ+
Sbjct: 104 QVFHAQPKPGEGAMAAPQPQQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQD 163
Query: 163 LVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG 222
LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+P+ SV+ E+
Sbjct: 164 LVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPI-SVKGEAS 221
Query: 223 EGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPES 282
+ Q WEKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 222 DSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQD 281
Query: 283 PNLVKPETNPP 293
+ VKPE N P
Sbjct: 282 GHSVKPEPNTP 292
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/188 (69%), Positives = 149/188 (79%), Gaps = 4/188 (2%)
Query: 107 NVFHGQPL---PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
VFH QP + VP PPA RP+ RARRGQATDPHSIAERLRRERIAER+RALQEL
Sbjct: 99 QVFHAQPRLGEGAMVPQPHQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQEL 158
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGE 223
VP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA L+ D+PLS +E+ +
Sbjct: 159 VPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLI-ADIPLSVKGEEASD 217
Query: 224 GVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESP 283
Q WEKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 218 SGGKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHLQDG 277
Query: 284 NLVKPETN 291
+ +KPE N
Sbjct: 278 HSMKPEPN 285
>gi|224082728|ref|XP_002306815.1| predicted protein [Populus trichocarpa]
gi|222856264|gb|EEE93811.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/134 (89%), Positives = 127/134 (94%), Gaps = 1/134 (0%)
Query: 160 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
LQELVPSVNKTDRA MLDEIVDYVKFLRLQVKVLSMSR+G GAVAPLVT D+PLSSVED
Sbjct: 52 LQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVT-DIPLSSVED 110
Query: 220 ESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQP 279
E+GEG RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYH+QP
Sbjct: 111 ETGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHTQP 170
Query: 280 PESPNLVKPETNPP 293
P++ +VKPETNPP
Sbjct: 171 PDTTTIVKPETNPP 184
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/191 (69%), Positives = 151/191 (79%), Gaps = 6/191 (3%)
Query: 107 NVFHGQPLPS----PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQE 162
VFH QP P P PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQ+
Sbjct: 153 QVFHAQPKPGEGAMAAPQPQQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQD 212
Query: 163 LVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG 222
LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+P+ SV+ E+
Sbjct: 213 LVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPI-SVKGEAS 270
Query: 223 EGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPES 282
+ Q WEKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY +Q +
Sbjct: 271 DSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQD 330
Query: 283 PNLVKPETNPP 293
+ VKPE N P
Sbjct: 331 GHSVKPEPNTP 341
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 158/303 (52%), Positives = 180/303 (59%), Gaps = 50/303 (16%)
Query: 5 PNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLSSGDGSSHISALGGGV 64
P S DDFLE P+ SA +G A
Sbjct: 6 PPPGGSEDDFLEHFFAFPSAASAAAGGHAG------------------------------ 35
Query: 65 SSGYHGQVFPLGLSLEQGK-----------GGFLKPEEASGSGKRFPEEHA--IKNVFHG 111
+ FPL LSL+ G P A G + P +F
Sbjct: 36 AGAGGDHPFPLALSLDAAAEPKPDRDPVQLAGLFPPVFAGAGGVQQPHLRGPPPPQMFQA 95
Query: 112 QPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTD 171
QP P AP PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP+ NKTD
Sbjct: 96 QPKPGEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTD 155
Query: 172 RAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAW 231
RAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+ + Q W
Sbjct: 156 RAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEASDSGSTQHIW 213
Query: 232 EKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIY---HSQPPESPNLVKP 288
EKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY HSQ + +L+KP
Sbjct: 214 EKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQ--DGHSLMKP 271
Query: 289 ETN 291
E N
Sbjct: 272 EPN 274
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 165/240 (68%), Gaps = 23/240 (9%)
Query: 73 FPLGLSLEQGK-----------GGFLKPEEASGSGKRFPEEHAIK--NVFHGQPLPSPVP 119
FPL LSL+ G P A G P +F QP P
Sbjct: 45 FPLALSLDAAAEAKPDRDPVQLAGLFPPVFAGAGGVHQPHLRGPPPPQMFQAQPKPGEGG 104
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEI 179
AP PPA RP+VRARRGQATDPHSIAERLRRERIAER+RALQELVP+ NKTDRAAMLDEI
Sbjct: 105 MAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEI 164
Query: 180 VDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEG------VRNQPAWEK 233
+DYVKFLRLQVKVLSMSR+G GAVA LV D+PL SV+ E+G+G + Q WEK
Sbjct: 165 LDYVKFLRLQVKVLSMSRLGGAGAVAQLV-ADIPL-SVKGEAGDGGGAPQQQQQQHVWEK 222
Query: 234 WSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPES--PNLVKPETN 291
WS DGTE+QVAKLMEE++GAAMQFLQSKALC+MP+SLA AIY +Q P + +KPE N
Sbjct: 223 WSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPVSLAMAIYDTQHPLDGHGHSLKPEPN 282
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/163 (65%), Positives = 126/163 (77%), Gaps = 10/163 (6%)
Query: 118 VPAAPHPPAM--RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM 175
VPA P M RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+M
Sbjct: 16 VPAGQSLPGMGARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASM 75
Query: 176 LDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVED----ESGEGVRNQPAW 231
LDEI+DYVKFL+LQVKVLSMSR+G GA LV +D P + GV N PA
Sbjct: 76 LDEIIDYVKFLQLQVKVLSMSRLGGAGA---LVNSDPPAEGGNNFAASAGSSGVSN-PAQ 131
Query: 232 EKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
+ ++ TERQV ++ME+++GAAMQ+LQSK LC+MPISLATAI
Sbjct: 132 DGLASALTERQVTRMMEDDMGAAMQYLQSKGLCLMPISLATAI 174
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 149/239 (62%), Gaps = 33/239 (13%)
Query: 45 MLQLSSGDGSSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHA 104
++ SS G + + AL G S HG P QG ++ GSG A
Sbjct: 132 VVNTSSAAGDASVQALFNGFSGSLHGVAQPHHFQPPQG--------QSFGSGSVSATNQA 183
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
P AP P R +VRARRGQATDPHSIAERLRRERIAER++ALQELV
Sbjct: 184 ------------PASGAPAQP--RQKVRARRGQATDPHSIAERLRRERIAERMKALQELV 229
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVED---ES 221
P+ NKTD+A+MLDEI+DYVKFL++QVKVLSMSR+G GAVAPLV D+ V D +
Sbjct: 230 PNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLV-ADMSSEGVSDCVQTN 288
Query: 222 GEGV---RNQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
G G RN P SN+ TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI
Sbjct: 289 GNGGVHPRN-PKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 346
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 127/170 (74%), Gaps = 13/170 (7%)
Query: 108 VFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSV 167
V GQPLP RPRVRARRGQATDPHSIAERLRRERIAER++ALQELVP+
Sbjct: 17 VPSGQPLPGI--------GARPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNS 68
Query: 168 NKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP---LSSVEDESGEG 224
NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G GA+ LV DLP ++ +G
Sbjct: 69 NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAGALPSLVNNDLPSEGANTFAASAGSS 128
Query: 225 VRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
PA + + TERQV ++ME+++G+AMQ+LQSK LC+MPISLATAI
Sbjct: 129 GIPNPAQDGLAL--TERQVTRMMEDDMGSAMQYLQSKGLCLMPISLATAI 176
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 123/160 (76%), Gaps = 17/160 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEIVDYVKFL+
Sbjct: 237 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 296
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVA 244
LQVKVLSMSR+G AVAPLV D S EG R A S+DG TE+QVA
Sbjct: 297 LQVKVLSMSRLGGAAAVAPLVA---------DMSSEG-RGGVAVAAGSDDGLAVTEQQVA 346
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
KLMEE++G AMQ+LQ K LC+MP+SLA+AI H +PP
Sbjct: 347 KLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPP 386
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 123/160 (76%), Gaps = 17/160 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEIVDYVKFL+
Sbjct: 236 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQ 295
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVA 244
LQVKVLSMSR+G AVAPLV D S EG R A S+DG TE+QVA
Sbjct: 296 LQVKVLSMSRLGGAAAVAPLVA---------DMSSEG-RGGVAVAAGSDDGLAVTEQQVA 345
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
KLMEE++G AMQ+LQ K LC+MP+SLA+AI H +PP
Sbjct: 346 KLMEEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPP 385
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 145/231 (62%), Gaps = 33/231 (14%)
Query: 53 GSSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQ 112
G + + AL G S HG P QG ++ GSG A
Sbjct: 143 GDASVQALFNGFSGSLHGVAQPHHFQPPQG--------QSFGSGSVSATNQA-------- 186
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR 172
P AP P R +VRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+
Sbjct: 187 ----PASGAPAQP--RQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDK 240
Query: 173 AAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVED---ESGEGV---R 226
A+MLDEI+DYVKFL++QVKVLSMSR+G GAVAPLV D+ V D +G G R
Sbjct: 241 ASMLDEIIDYVKFLQVQVKVLSMSRLGGAGAVAPLV-ADMSSEGVSDCVQTNGNGGVHPR 299
Query: 227 NQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
N P SN+ TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI
Sbjct: 300 N-PKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 349
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 123/153 (80%), Gaps = 7/153 (4%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RPRVRARRGQATDPHSIAERLRRE+IAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 133 RPRVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 192
Query: 188 LQVKVLSMSRVGAPGA-VAPLVTTDLPLSSVEDE--SGEGVRNQPAWEKWSNDG---TER 241
LQVKVLSMSR+G GA +APLV DLPL E S + Q + DG TE
Sbjct: 193 LQVKVLSMSRLGGAGATMAPLV-ADLPLEGAGQELVSSSQLCRQISVNLSPQDGIALTEH 251
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
QVA+LME+++G+AMQ+LQSK LC+MPISLAT+I
Sbjct: 252 QVARLMEDDMGSAMQYLQSKGLCLMPISLATSI 284
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 134/204 (65%), Gaps = 19/204 (9%)
Query: 97 KRFPEEHAIKNVFHGQPLPSPVPA-APHPPAMRPRVRARRGQATDPHSIAERLRRERIAE 155
+ F + A QP S AP P R RVRARRGQATDPHSIAERLRRERIAE
Sbjct: 4 QNFGAQGAATTAVMNQPQASGSNGGAPAQP--RQRVRARRGQATDPHSIAERLRRERIAE 61
Query: 156 RIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTT----- 210
R++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AVAPLV
Sbjct: 62 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEA 121
Query: 211 --DLPLSSVEDESGEGVRNQPAWEKWSNDG----TERQVAKLMEENVGAAMQFLQSKALC 264
D +S + S N + +ND TE QVAKLMEE++G+AMQ+LQ K LC
Sbjct: 122 GGDCIQASADGGSLSRTSNGNQTAR-TNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLC 180
Query: 265 IMPISLATAI----YHSQPPESPN 284
+MPISLATAI H++ P N
Sbjct: 181 LMPISLATAISTATCHNRSPAINN 204
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 123/163 (75%), Gaps = 17/163 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 222 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 281
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDL-------PLSSVEDESGEGVR------NQPAWEKW 234
LQVKVLSMSR+G AVAPLV D+ + + + +G G NQ +
Sbjct: 282 LQVKVLSMSRLGGAAAVAPLV-ADMYSEGGGDCIQANGNSNGGGAHAPNSNTNQTSATTP 340
Query: 235 SNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI
Sbjct: 341 SNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 383
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/245 (51%), Positives = 148/245 (60%), Gaps = 27/245 (11%)
Query: 51 GDGSSHISALGGGVSSG-YHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVF 109
GDGS + AL G + G HG G + Q + F P+ S + + A V
Sbjct: 191 GDGS--VQALYNGFAPGALHGS----GQASNQAQN-FHHPQGGSMQAQNY---GAPATVM 240
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
+ P AP P R RVRARRGQAT PHSIAERLRRERIAER++ALQELVP+ NK
Sbjct: 241 NQTPATGSAGGAPAQP--RQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK 298
Query: 170 TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTT-------DLPLSSVEDESG 222
TD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AVAPLV D +S
Sbjct: 299 TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQASGTSGPT 358
Query: 223 EGVRNQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----Y 275
G SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI
Sbjct: 359 GGRATNGTQTXTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTTTC 418
Query: 276 HSQPP 280
HS+ P
Sbjct: 419 HSRNP 423
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 119/150 (79%), Gaps = 15/150 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 194 KQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 253
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVA 244
LQVKVLSMSR+G AVAPLV + G+ ++ A SND TE+QVA
Sbjct: 254 LQVKVLSMSRLGGAAAVAPLVA---------EGGGDCIQ---AKRSNSNDSLAMTEQQVA 301
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLMEE++G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 302 KLMEEDMGSAMQYLQGKGLCLMPISLASAI 331
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 140/230 (60%), Gaps = 22/230 (9%)
Query: 51 GDGSSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFH 110
GDGS + AL G + HG G + Q + F P+ S + + A V +
Sbjct: 36 GDGS--VQALYNGFAGALHGS----GQASNQAQN-FHHPQGGSMQAQNYG---APATVMN 85
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
P AP P R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKT
Sbjct: 86 QTPATGSAGGAPAQP--RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKT 143
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTT-------DLPLSSVEDESGE 223
D+A+MLDEI+DYVKFL+LQVKVLSMSR+G AVAPLV D +S
Sbjct: 144 DKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQASGTSGPTG 203
Query: 224 GVRNQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISL 270
G SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISL
Sbjct: 204 GRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 253
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 121/160 (75%), Gaps = 14/160 (8%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 171 KPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 230
Query: 188 LQVKVLSMSRVGAPGAVAPLV--------TTDLPLSSVEDESGEGV--RNQPAWEKWSND 237
LQVKVLSMSR+G AVAPLV V + +G GV R+ +ND
Sbjct: 231 LQVKVLSMSRLGGAAAVAPLVADISSEGGGGGGGGDCVTNGAG-GVLPRSTTTAASTTND 289
Query: 238 G---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI
Sbjct: 290 SLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 329
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 124/164 (75%), Gaps = 15/164 (9%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVPS NKTD+A+MLDEI+DYVKFL+
Sbjct: 141 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQ 200
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND---------- 237
+QVKVLSMSR+G GAVAPLV +S ++ +G+G + W+ + +
Sbjct: 201 VQVKVLSMSRLGGAGAVAPLVAN---MSPEDNGNGDGT-SSSGWDGNAGNSDDNGGGSTL 256
Query: 238 -GTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPP 280
TE QV++LMEE++G+AMQ+LQ K LC+MPISLA+ I + P
Sbjct: 257 RATEEQVSRLMEEDMGSAMQYLQGKGLCLMPISLASLISSATSP 300
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 122/190 (64%), Gaps = 35/190 (18%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 250 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 309
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG--------- 238
LQVKVLSMSR+G AVAPLV D S EG + SN G
Sbjct: 310 LQVKVLSMSRLGGAAAVAPLVA---------DMSSEGGGDCIQANGKSNGGGAQASTTNT 360
Query: 239 -----------------TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPE 281
TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI + P
Sbjct: 361 NTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPT 420
Query: 282 SPNLVKPETN 291
V P N
Sbjct: 421 RNVNVNPLIN 430
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 126/184 (68%), Gaps = 29/184 (15%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 253 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 312
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGV----------------RNQPAW 231
LQVKVLSMSR+G AVAPLV + + E G N +
Sbjct: 313 LQVKVLSMSRLGGAAAVAPLV------ADISSEGGGDCIQANANGAAGNGSLPRANNSSQ 366
Query: 232 EKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPPESPN 284
SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI H++ + +
Sbjct: 367 TPSSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRNTTTNS 426
Query: 285 LVKP 288
L+ P
Sbjct: 427 LLNP 430
>gi|115470903|ref|NP_001059050.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|113610586|dbj|BAF20964.1| Os07g0182200 [Oryza sativa Japonica Group]
gi|215694864|dbj|BAG90055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 112/137 (81%), Gaps = 2/137 (1%)
Query: 157 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS 216
+RALQ+LVP+ NKTDRAAMLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+P+S
Sbjct: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVA-DIPIS- 58
Query: 217 VEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYH 276
V+ E+ + Q WEKWS DGTE+QVAKLMEE++GAAMQFLQSKALC+MPISLA AIY
Sbjct: 59 VKGEASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYD 118
Query: 277 SQPPESPNLVKPETNPP 293
+Q + + VKPE N P
Sbjct: 119 TQHSQDGHSVKPEPNTP 135
>gi|195649667|gb|ACG44301.1| BHLH transcription factor [Zea mays]
Length = 136
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 110/137 (80%), Gaps = 2/137 (1%)
Query: 157 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS 216
+RALQELVP+ NKTDRA MLDEI+DYVKFLRLQVKVLSMSR+G GAVA LV D+PLS
Sbjct: 1 MRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVA-DIPLS- 58
Query: 217 VEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYH 276
V+ E+ + Q WEKWS DGTERQ+AKLMEE++GAAMQFLQSKALC+MPISLA AIY
Sbjct: 59 VKGEASDSGSKQQIWEKWSTDGTERQIAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYD 118
Query: 277 SQPPESPNLVKPETNPP 293
+Q + VKPE N P
Sbjct: 119 TQHSQDGQPVKPEPNTP 135
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 123/177 (69%), Gaps = 27/177 (15%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+ YVKFL+
Sbjct: 27 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQ 86
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVA 244
LQVKVLSMSR+G AVAPLV + + E G N +ND TE QV
Sbjct: 87 LQVKVLSMSRLGGAAAVAPLV------ADISSEVRNG--NNGTVTASTNDTLTVTEHQVV 138
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI-----------YHSQP-----PESPNL 285
KLMEE++G+AMQ+LQ K LC+MPISLA+AI H+ P P SPNL
Sbjct: 139 KLMEEDMGSAMQYLQGKGLCLMPISLASAISTATCHPRVNPXHNNPNGGDAPSSPNL 195
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 122/170 (71%), Gaps = 17/170 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ +VRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 201 KQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 260
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR-------------NQPAWEKW 234
LQVKVLSMSR+G AVAPLV E G G + NQ A
Sbjct: 261 LQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGAQAGGRNSNNNGNGGNQTASTND 320
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
S TE+QVAKLME+++G+AMQ+LQ K LC+MPISLATAI HS+ P
Sbjct: 321 SMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCHSRNP 370
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP R ++RARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYV 190
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQV 243
KFL+LQVKVLSMSR+G +V+ ++ + G S TE QV
Sbjct: 191 KFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQV 250
Query: 244 AKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPPESPNLVKPETNPPP 294
AKLMEE++G+AMQ+LQ K LC+MPISLATAI HS+ P P V P P
Sbjct: 251 AKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVGGPSP 305
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 124/177 (70%), Gaps = 19/177 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI++YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG-------------EGVRNQPAWEKW 234
LQVKVLSMSR+G GAV P L+ + E+G G N
Sbjct: 156 LQVKVLSMSRLGGAGAVGP------RLNGLSAEAGGRLNALTAPCNGLNGNGNVTGSSNE 209
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPETN 291
S TE++VAKLMEE++G+AMQ+LQ K LC+MPISLATAI S +L P +N
Sbjct: 210 SLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNPISN 266
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 121/175 (69%), Gaps = 4/175 (2%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP R ++RARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYV 190
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQV 243
+FL+LQVKVLSMSR+G +V+ ++ + G S TE QV
Sbjct: 191 EFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQV 250
Query: 244 AKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPPESPNLVKPETNPPP 294
AKLMEE++G+AMQ+LQ K LC+MPISLATAI HS+ P P V P P
Sbjct: 251 AKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGAVADVGGPSP 305
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 10/178 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP R ++RARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYV 190
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TE 240
KFL+LQVKVLSMSR+G +V+ ++ + + SND TE
Sbjct: 191 KFLQLQVKVLSMSRLGGAASVSSQIS---EAGGSHGNASSAMVGGSQTAGNSNDSVTMTE 247
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPPESPNLVKPETNPPP 294
QVAKLMEE++G+AMQ+LQ + LC+MPISLATAI HS+ P P V P P
Sbjct: 248 HQVAKLMEEDMGSAMQYLQGEGLCLMPISLATAISTATCHSRNPLIPGAVADVGGPSP 305
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 121/167 (72%), Gaps = 19/167 (11%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 122 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 181
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG----TE 240
FL+LQVKVLSMSR+G +V+ ++ ED G + E S+ G TE
Sbjct: 182 FLQLQVKVLSMSRLGGAASVSSQIS--------EDAGG-------SHENTSSSGEAKMTE 226
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVK 287
QVAKLMEE++G+AMQ+LQ K LC+MPISLAT I + P VK
Sbjct: 227 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRNPFVK 273
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 124/167 (74%), Gaps = 10/167 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PP R +VRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYV 190
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TE 240
KFL+LQVKVLSMSR+G +V+ + ++ S S +Q A SND TE
Sbjct: 191 KFLQLQVKVLSMSRLGGAASVSSQL-SEAGGSHGNASSAMAGGSQTAGN--SNDSITMTE 247
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPPESP 283
QVAKLMEE++G+AMQ+LQ K LC+MPISLATAI HS+ P P
Sbjct: 248 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIP 294
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 19/167 (11%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 181 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 240
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG----TE 240
FL+LQVKVLSMSR+G + + ++ ED G + E S+ G TE
Sbjct: 241 FLQLQVKVLSMSRLGGAASASSQIS--------EDAGG-------SHENTSSSGEAKMTE 285
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVK 287
QVAKLMEE++G+AMQ+LQ K LC+MPISLAT I + P VK
Sbjct: 286 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVK 332
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 19/167 (11%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 183
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG----TE 240
FL+LQVKVLSMSR+G + + ++ ED G + E S+ G TE
Sbjct: 184 FLQLQVKVLSMSRLGGAASASSQIS--------EDAGG-------SHENTSSSGEAKMTE 228
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVK 287
QVAKLMEE++G+AMQ+LQ K LC+MPISLAT I + P VK
Sbjct: 229 HQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVK 275
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 118/152 (77%), Gaps = 17/152 (11%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RPRVRARRGQATDPHSIAERLRRERIAER++ALQ+LVP+ NKTD+A+MLDEIVDYVKFL+
Sbjct: 1 RPRVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQ 60
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEK-----WSNDG---T 239
LQVKVLSMSR+G+ AV P + DLP EG + A S+DG
Sbjct: 61 LQVKVLSMSRLGSAAAV-PSLVADLP--------SEGANSLLASTLSRSTGISHDGLASA 111
Query: 240 ERQVAKLMEENVGAAMQFLQSKALCIMPISLA 271
ERQVA+LM+E++G+AMQ+LQSK LC+MPISLA
Sbjct: 112 ERQVARLMDEDMGSAMQYLQSKGLCLMPISLA 143
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 122/174 (70%), Gaps = 19/174 (10%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI++YV+FL+
Sbjct: 96 KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQ 155
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG-------------EGVRNQPAWEKW 234
LQVKVLSMSR+G G+V P L+ + E+G G N
Sbjct: 156 LQVKVLSMSRLGGAGSVGP------RLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNE 209
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
S TE++VAKLMEE++G+AMQ+LQ K LC+MPISLATAI S +L P
Sbjct: 210 SLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISSSTTHSRGSLFNP 263
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 117/155 (75%), Gaps = 16/155 (10%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R++ LQ+LVP+ NK D+A+MLDEI+DYVKFL
Sbjct: 313 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 372
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQP-------AWEKWSNDGT 239
+LQVKVLSMSRVGAPGAV PL+T + EG QP A + +
Sbjct: 373 QLQVKVLSMSRVGAPGAVLPLLT---------ESKTEGYHGQPLPQGLLDALDSEDSFVF 423
Query: 240 ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQSK LC+MP++LA+AI
Sbjct: 424 EEEVVKLMETSITSAMQYLQSKGLCLMPVALASAI 458
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 117/155 (75%), Gaps = 16/155 (10%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R++ LQ+LVP+ NK D+A+MLDEI+DYVKFL
Sbjct: 278 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 337
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQP-------AWEKWSNDGT 239
+LQVKVLSMSRVGAPGAV PL+T + EG QP A + +
Sbjct: 338 QLQVKVLSMSRVGAPGAVLPLLT---------ESKTEGYHGQPLPQGLLDALDSEDSFVF 388
Query: 240 ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQSK LC+MP++LA+AI
Sbjct: 389 EEEVVKLMETSITSAMQYLQSKGLCLMPVALASAI 423
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 119/167 (71%), Gaps = 19/167 (11%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P +P+VRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVK 183
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG----TE 240
FL+LQVKVLSMSR+G + + ++ ED G + E S+ G TE
Sbjct: 184 FLQLQVKVLSMSRLGGAASASSQIS--------EDAGG-------SHENTSSSGEAKMTE 228
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVK 287
Q AKLMEE++G+AMQ+LQ K LC+MPISLAT I + P VK
Sbjct: 229 HQXAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVK 275
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 119/168 (70%), Gaps = 20/168 (11%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 214 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 273
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPL---------SSVEDESGEGVRNQPAWEKWSNDG 238
LQVKVLS+SR+G A P DL + SG+ P+ SND
Sbjct: 274 LQVKVLSVSRLGGATAAMPSRLPDLSTEGGTECNQSNGTNGASGQTSTGAPS----SNDA 329
Query: 239 ---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQP 279
TE QV KLMEE++G+AMQ+LQ K LC+MPISLATAI HS+P
Sbjct: 330 MTVTEHQVVKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRP 377
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 115/154 (74%), Gaps = 13/154 (8%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ NKTD+A+MLDEI++YVKFL+
Sbjct: 293 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 352
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA-------WEKWSNDGTE 240
LQVKVLSMSR+GA AV PL+T + E +G+ P+ + E
Sbjct: 353 LQVKVLSMSRLGAAEAVVPLITDG------QAEGSKGLSLSPSAGQAEDICQSPDQIAFE 406
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
++V KLME NV AMQ+LQSK LC+MPI+LATAI
Sbjct: 407 QEVVKLMESNVTMAMQYLQSKGLCLMPIALATAI 440
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 117/160 (73%), Gaps = 21/160 (13%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R+++LQ+LVP+ NK D+A+MLDEI+DYVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGT------- 239
+LQVKVLSMSR+GAPGAV PL+T + EG QP + G
Sbjct: 376 QLQVKVLSMSRLGAPGAVLPLLT---------ESQTEGYHGQPLSAPTNTQGLLDALDSE 426
Query: 240 -----ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQ+K LC+MP++LA+AI
Sbjct: 427 DAFVFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAI 466
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 115/154 (74%), Gaps = 13/154 (8%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ NKTD+A+MLDEI++YVKFL+
Sbjct: 146 KPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQ 205
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA-------WEKWSNDGTE 240
LQVKVLSMSR+GA AV PL+T + E +G+ P+ + E
Sbjct: 206 LQVKVLSMSRLGAAEAVVPLITDG------QAEGSKGLSLSPSAGQAEDICQSPDQIAFE 259
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
++V KLME NV AMQ+LQSK LC+MPI+LATAI
Sbjct: 260 QEVVKLMESNVTMAMQYLQSKGLCLMPIALATAI 293
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 120/154 (77%), Gaps = 11/154 (7%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK---TDRAAMLDEIVDYVK 184
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NK TD+A+MLDEI+DYVK
Sbjct: 235 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVK 294
Query: 185 FLRLQVK----VLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTE 240
FL+LQVK VLSMSR+G AVAPLV D+ S E G G PA E S TE
Sbjct: 295 FLQLQVKASMHVLSMSRLGGAAAVAPLV-ADM---SSEGRGGAGNGGGPAAESDSLTVTE 350
Query: 241 RQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
+QVAKLMEE++GAAMQ+LQ K LC+MP+SLA+AI
Sbjct: 351 QQVAKLMEEDMGAAMQYLQGKGLCLMPVSLASAI 384
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 147/252 (58%), Gaps = 34/252 (13%)
Query: 51 GDGSSHISALGGGVSSGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFH 110
GDGS + AL G + HG G + Q + F P+ S + + A V +
Sbjct: 217 GDGS--VQALYNGFAGALHGS----GQASNQAQN-FHHPQGGSMQAQNY---GAPATVMN 266
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK- 169
P AP P R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NK
Sbjct: 267 QTPATGSAGGAPAQP--RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKV 324
Query: 170 -----TDRAAMLDEIVDYVKFLRLQ---------VKVLSMSRVGAPGAVAPLVTTDLPLS 215
TD+A+MLDEI+DYVKFL+LQ V+VLSMSR+G AVAPLV +
Sbjct: 325 IHPTLTDKASMLDEIIDYVKFLQLQVKVFLTVVVVQVLSMSRLGGAAAVAPLVADMSSEA 384
Query: 216 SVEDESGEGVRNQPAWEKWSNDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLAT 272
S G SND TE QVAKLMEE++G+AMQ+LQ K LC+MPISLAT
Sbjct: 385 SGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLAT 444
Query: 273 AI----YHSQPP 280
AI HS+ P
Sbjct: 445 AISTTTCHSRNP 456
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 117/159 (73%), Gaps = 11/159 (6%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R RA+RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQ
Sbjct: 187 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 246
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ--------PAWEKWSNDGTER 241
VKVLSMSR+G AV LV ++S + SG+G + S TE+
Sbjct: 247 VKVLSMSRLGGATAVGTLVAG---IASEGNGSGDGTSDSGKGNAANGENGGGGSLQVTEQ 303
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPP 280
QVA+LMEE++G AMQ+LQ K LC+MPISLA+AI + P
Sbjct: 304 QVARLMEEDMGTAMQYLQGKGLCLMPISLASAISSATWP 342
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 123/176 (69%), Gaps = 13/176 (7%)
Query: 116 SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM 175
S PAA +PRVRARRGQATDPHSIAERLRRE+IAER++ LQELVP+ +K D+A+M
Sbjct: 336 STAPAASCNGTGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASM 395
Query: 176 LDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVT-------TDLPLSSVEDESGEGVRNQ 228
LDEI++YVKFL+LQVKVLSMSR+GA GAV PL+T L LS+ +G G+
Sbjct: 396 LDEIIEYVKFLQLQVKVLSMSRLGATGAVIPLITDGQAEGSNSLSLST---SAGLGIDVA 452
Query: 229 PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPN 284
P+ ++ + E +V KL+E NV A+Q+LQ K C+MPI+LA AI + S N
Sbjct: 453 PSSDQIA---FEHEVLKLLESNVTKAIQYLQGKGFCLMPIALAAAISSGKASLSCN 505
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 115/150 (76%), Gaps = 3/150 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ+LVP+ NK D+A+MLDEI+DYVKFL+
Sbjct: 312 KPRTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQ 371
Query: 188 LQVKVLSMSRVGAPGAVAPLV-TTDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVA 244
LQVKVLSMSR+GAPGAV PL+ + S S + P S D + E++V
Sbjct: 372 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPTDMPDSEDSSAFEQEVV 431
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 432 KLMETSITSAMQYLQNKGLCLMPIALASAI 461
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 125/186 (67%), Gaps = 19/186 (10%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P + RVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 177 PPRQTRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 236
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG------ 238
FL+LQVKVLSMSR+G +APLV + +SS + S + A + +G
Sbjct: 237 FLQLQVKVLSMSRLGGAAGMAPLVAS---MSSEANSSNTKSGSGAAAAAATANGNGNGGE 293
Query: 239 ----------TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKP 288
TE+QVAK+MEE++G AMQ+LQ K LC+MPISLA+AI + +
Sbjct: 294 KSGGGAGLRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMPISLASAISSATTTTGASPASL 353
Query: 289 ETNPPP 294
PPP
Sbjct: 354 LARPPP 359
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 121/168 (72%), Gaps = 10/168 (5%)
Query: 114 LPSPVPAAPHPPAM---RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
+P AAP + RVRARRG ATDPHSIAERLRRE+IAER++ LQELVP+ NK
Sbjct: 220 MPQTTSAAPVEGCNGTGKTRVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKV 279
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLS----SVEDESGEGVR 226
D+A+MLDEI++YVKFL+LQVKVLSMSR+GA GAV PL+T P S+ +G G+
Sbjct: 280 DKASMLDEIIEYVKFLQLQVKVLSMSRLGAAGAVIPLLTDGQPEGHNSLSLSPSAGLGID 339
Query: 227 NQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
P+ ++ + E++V KL+E +V AMQ+LQSK LC+MPI+LA AI
Sbjct: 340 ISPSADQIA---FEQEVLKLLESDVTMAMQYLQSKGLCLMPIALAAAI 384
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 114/159 (71%), Gaps = 21/159 (13%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ+LVP+ NK D+++MLDEI+DYVKFL+
Sbjct: 317 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 376
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGT-------- 239
LQVKVLSMSR+GAPGAV PL+ + EG N P ++ G
Sbjct: 377 LQVKVLSMSRLGAPGAVLPLLA---------ESQTEGRSNSPLSSPTTSQGLLDVAGPDD 427
Query: 240 ----ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E++V KLME ++ AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 428 SLVFEQEVIKLMETSITNAMQYLQNKGLCLMPIALASAI 466
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 114/160 (71%), Gaps = 21/160 (13%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R++ LQ+LVP+ NK D+A+MLDEI+DYVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ------------PAWEKW 234
+LQVKVLSMSR+GAPGAV PL+ + EG R Q E
Sbjct: 376 QLQVKVLSMSRLGAPGAVLPLLA---------ESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQ+K LC+MP++LA+AI
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAI 466
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 114/160 (71%), Gaps = 21/160 (13%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R++ LQ+LVP+ NK D+A+MLDEI+DYVKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFL 375
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ------------PAWEKW 234
+LQVKVLSMSR+GAPGAV PL+ + EG R Q E
Sbjct: 376 QLQVKVLSMSRLGAPGAVLPLLA---------ESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQ+K LC+MP++LA+AI
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAI 466
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 16/177 (9%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRE+I++R++ LQELVP+ NKT++A+MLDEI+DYVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 188 LQVKVLSMSRVGAPGAVAPLVT---TDLP-------LSSVEDESGEGVRNQ--PAWEKWS 235
LQVKVLSMSR+GA AV PL+T T+ P SS E ++G G P +
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPEL 430
Query: 236 NDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPE 289
DG E++V KLME+N+ AMQ+LQSK LC+MP++LA+AI +Q S V+PE
Sbjct: 431 LDGGAMFEQEVVKLMEDNMTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 3/150 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ LVP+ NK D+A+MLDEI+DYVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 188 LQVKVLSMSRVGAPGAVAPLV-TTDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVA 244
LQVKVLSMSR+GAPGAV PL+ + S S + P S D + E++V
Sbjct: 373 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPTDMPDSEDSSAFEQEVV 432
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 433 KLMETSIISAMQYLQNKGLCLMPIALASAI 462
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 16/177 (9%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PRVRARRGQATDPHSIAERLRRE+I++R++ LQELVP+ NKT++A+MLDEI+DYVKFL+
Sbjct: 311 KPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQ 370
Query: 188 LQVKVLSMSRVGAPGAVAPLVT---TDLP-------LSSVEDESGEGVRNQ--PAWEKWS 235
LQVKVLSMSR+GA AV PL+T T+ P SS E ++G G P +
Sbjct: 371 LQVKVLSMSRLGAAEAVVPLLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQPEL 430
Query: 236 NDG---TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPPESPNLVKPE 289
DG E++V KLME+N+ AMQ+LQSK LC+MP++LA+AI +Q S V+PE
Sbjct: 431 LDGGAMFEQEVVKLMEDNMTTAMQYLQSKGLCLMPVALASAI-SAQKGTSSAAVRPE 486
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 114/161 (70%), Gaps = 14/161 (8%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 156 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 215
Query: 188 LQVK----------VLSMSRVGAPGAVAPLV----TTDLPLSSVEDESGEGVRNQPAWEK 233
LQVK VLSMSR+G AVAPLV + + + A
Sbjct: 216 LQVKASTYTKLLIHVLSMSRLGGAAAVAPLVADMSSEGRGGGAANGGAPAAAAAAAAAGS 275
Query: 234 WSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
S TE+QVAKLMEE++G AMQ+LQ K LC+MPISLA+AI
Sbjct: 276 DSLTVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPISLASAI 316
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 113/159 (71%), Gaps = 21/159 (13%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ+LVP+ NK D+++MLDEI+DYVKFL+
Sbjct: 316 KPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQ 375
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGT-------- 239
LQVKVL MSR+GAPGAV PL+ + EG N P ++ G
Sbjct: 376 LQVKVLCMSRLGAPGAVLPLLA---------ESQTEGRSNSPLSSPTASQGLLDAAGPED 426
Query: 240 ----ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E++V KLME ++ AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 427 SLVFEQEVIKLMETSITNAMQYLQNKGLCLMPIALASAI 465
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 114/159 (71%), Gaps = 21/159 (13%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQELVP+ NK D+++MLDEI+DYVKFL+
Sbjct: 318 KPRSRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQ 377
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGT-------- 239
LQVKVLSMSR+GAPGAV PL + + EG N ++ G
Sbjct: 378 LQVKVLSMSRLGAPGAVLPL---------LRESQTEGHSNSSLSGTTTSQGLLDVANPED 428
Query: 240 ----ERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E++V KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 429 SVVFEQEVIKLMETSITSAMQYLQNKGLCLMPIALASAI 467
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 118/170 (69%), Gaps = 19/170 (11%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK---TDRAAMLDEIVDYVK 184
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NK TD+A+MLDEI+DYVK
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVK 306
Query: 185 FLRLQVK----------VLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKW 234
FL+LQVK VLSMSR+G AVAPLV D+ S A
Sbjct: 307 FLQLQVKASTYTKLLIHVLSMSRLGGAAAVAPLV-ADMS-SEGRGGGAANGGAPAAAGSD 364
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
S TE+QVAKLMEE++G AMQ+LQ K LC+MPISLA+AI H +PP
Sbjct: 365 SLTVTEQQVAKLMEEDMGTAMQYLQGKGLCLMPISLASAISSATCHLRPP 414
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 3/150 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ LVP+ NK D+A+MLDEI+DYVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 188 LQVKVLSMSRVGAPGAVAPLV-TTDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVA 244
LQVKVLSMSR+GAPGAV PL+ + S S + P S D + E++V
Sbjct: 373 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVV 432
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 433 KLMETSIISAMQYLQNKGLCLMPIALASAI 462
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 3/150 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ LVP+ NK D+A+MLDEI+DYVKFL+
Sbjct: 313 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 372
Query: 188 LQVKVLSMSRVGAPGAVAPLV-TTDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVA 244
LQVKVLSMSR+GAPGAV PL+ + S S + P S D + E++V
Sbjct: 373 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVV 432
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 433 KLMETSIISAMQYLQNKGLCLMPIALASAI 462
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 129/191 (67%), Gaps = 14/191 (7%)
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDR 172
P P A A +PRVRARRGQATDPHSIAERLRRE+I++R++ LQELVP+ N+TD+
Sbjct: 280 PFMVPANGAAGNGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDK 339
Query: 173 AAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS-----VEDESGEGVRN 227
A+MLDEI++YVKFL+LQVKVLSMSR+GA AV PL+T +S + SG G +
Sbjct: 340 ASMLDEIIEYVKFLQLQVKVLSMSRLGATEAVVPLLTQSQTENSGGGLLLSPRSGSGRQQ 399
Query: 228 Q--------PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQP 279
Q P+ E E++VA+LME ++ AMQ+LQSK LC+MP++LA+AI Q
Sbjct: 400 QARGGSLPPPSSEVRDGAAFEQEVAQLMESDMTTAMQYLQSKGLCLMPVALASAI-SGQK 458
Query: 280 PESPNLVKPET 290
S V+PE
Sbjct: 459 GASSAAVQPEN 469
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 3/150 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR RARRGQATDPHSIAERLRRE+I+ER++ LQ LVP+ NK D+A+MLDEI+DYVKFL+
Sbjct: 236 KPRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQ 295
Query: 188 LQVKVLSMSRVGAPGAVAPLV-TTDLPLSSVEDESGEGVRNQPAWEKWSNDGT--ERQVA 244
LQVKVLSMSR+GAPGAV PL+ + S S + P S D + E++V
Sbjct: 296 LQVKVLSMSRLGAPGAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVV 355
Query: 245 KLMEENVGAAMQFLQSKALCIMPISLATAI 274
KLME ++ +AMQ+LQ+K LC+MPI+LA+AI
Sbjct: 356 KLMETSIISAMQYLQNKGLCLMPIALASAI 385
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 107/142 (75%), Gaps = 9/142 (6%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
GQATDPHSIAERLRRERIAER++ALQELVPS NKTD+A+MLDEI+DYVKFL+LQVKVLSM
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSM 228
Query: 196 SRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG------TERQVAKLMEE 249
SR+G AV PL LSS +G G + N+G TE+QVA+LMEE
Sbjct: 229 SRLGGAAAVGPLAAG---LSSESSGNGNGTSSSGDGNGEDNNGGSTLWATEQQVARLMEE 285
Query: 250 NVGAAMQFLQSKALCIMPISLA 271
++G AMQ+LQ K LC+MPISLA
Sbjct: 286 DMGTAMQYLQGKGLCLMPISLA 307
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 114/160 (71%), Gaps = 21/160 (13%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++PRVRARRGQATDPHSIAERLRRE+I++R++ LQ+LVP+ NK D+A+MLDEI+D+VKFL
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFL 375
Query: 187 RLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ------------PAWEKW 234
+LQVKVLSMSR+GAPGAV PL+ + EG R Q E
Sbjct: 376 QLQVKVLSMSRLGAPGAVLPLLA---------ESQTEGYRGQLLSAPTNAQGLLDTEESE 426
Query: 235 SNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E +V KLME ++ +AMQ+LQ+K LC+MP++LA+AI
Sbjct: 427 DTFAFEEEVVKLMETSITSAMQYLQNKGLCLMPVALASAI 466
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R R RA RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 236 RQRERAWRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 295
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLM 247
LQ VLSMSR+G AVAPLV +SS + G A TE+QVAKLM
Sbjct: 296 LQ--VLSMSRLGGAAAVAPLVAD---MSS--EGRGGAGAAAAAGSDGGLAVTEQQVAKLM 348
Query: 248 EENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
EE++G AMQ+LQ K LC+MP+SLA+AI H +PP
Sbjct: 349 EEDMGTAMQYLQGKGLCLMPVSLASAISSATCHMRPP 385
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 111/146 (76%), Gaps = 6/146 (4%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+R R RA+RGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYV+FL
Sbjct: 190 LRQRQRAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFL 249
Query: 187 RLQVKVLSMSRV-GAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG----TER 241
+LQVKVLSMSR+ GA G +APLV + + S + G N A K N G E
Sbjct: 250 QLQVKVLSMSRLGGAAGGMAPLVAS-MASSEGKSNGSGGGGNTNATTKSGNGGGLRVAEH 308
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMP 267
QVAK+MEE++G AMQ+LQ K LC+MP
Sbjct: 309 QVAKMMEEDMGTAMQYLQGKGLCLMP 334
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 111/145 (76%), Gaps = 10/145 (6%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R RA+RGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQ
Sbjct: 194 RQRAKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQ 253
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR---NQPAWEKWSNDG----TERQ 242
VKVLSMSR+G AV PLV + ++S + +G G N A + G TE+Q
Sbjct: 254 VKVLSMSRLGGATAVGPLVAS---MASEGNGNGNGTSDSGNGNAANGENGGGSLQVTEQQ 310
Query: 243 VAKLMEENVGAAMQFLQSKALCIMP 267
VA+LMEE++G AMQ+LQ K LC+MP
Sbjct: 311 VARLMEEDMGTAMQYLQGKGLCLMP 335
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 111/140 (79%), Gaps = 13/140 (9%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
GQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSM
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
Query: 196 SRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVAKLMEENVG 252
SR+G GA V TDLP ++S + + + + DG TERQVAKLMEE++G
Sbjct: 324 SRLGNAGA----VMTDLP----PEDSNQFLA--ALGQNGAQDGIALTERQVAKLMEEDMG 373
Query: 253 AAMQFLQSKALCIMPISLAT 272
+AMQ+LQ+K LC+MPI LA+
Sbjct: 374 SAMQYLQNKGLCLMPIHLAS 393
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 111/140 (79%), Gaps = 13/140 (9%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
GQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSM
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSM 323
Query: 196 SRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG---TERQVAKLMEENVG 252
SR+G GA V TDLP ++S + + + + DG TERQVAKLMEE++G
Sbjct: 324 SRLGNAGA----VMTDLP----PEDSNQFLA--ALGQNGAQDGIALTERQVAKLMEEDMG 373
Query: 253 AAMQFLQSKALCIMPISLAT 272
+AMQ+LQ+K LC+MPI LA+
Sbjct: 374 SAMQYLQNKGLCLMPIHLAS 393
>gi|224082724|ref|XP_002306814.1| predicted protein [Populus trichocarpa]
gi|222856263|gb|EEE93810.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 120/199 (60%), Gaps = 54/199 (27%)
Query: 1 MANNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGS----PMMLQLSSGDGSSH 56
MANNP E TDDFL++ILG+PNF SAE+GL +D GLA + MMLQLSSGDGS H
Sbjct: 1 MANNPTE-PPTDDFLQEILGMPNFASAEAGLVGADAGLAGAAAAQASMMLQLSSGDGSGH 59
Query: 57 ISALGGGVSSG---YHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEE----------- 102
IS LGG G +HG FPLGLSLEQGKGGFLKPEEASGSGKRF +E
Sbjct: 60 ISDLGGAPGGGSAGFHG--FPLGLSLEQGKGGFLKPEEASGSGKRFRDEIVDGRAKNVGI 117
Query: 103 ---------------------------------HAIKNVFHGQPLPSPVPAAPHPPAMRP 129
VFHGQP+P+ V APHPPAMRP
Sbjct: 118 GGCSSAGEIAIFPVILVFVDDIFPVISVFVDEILVFLQVFHGQPMPTTVAIAPHPPAMRP 177
Query: 130 RVRARRGQATDPHSIAERL 148
RVRARRGQATDPHSIAER+
Sbjct: 178 RVRARRGQATDPHSIAERV 196
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%), Gaps = 17/160 (10%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P + RVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG------ 238
FL+LQVKVLSMSR+G +APLV + + S G G
Sbjct: 258 FLQLQVKVLSMSRLGGAAGMAPLVASMSSEGNSNGSSNGGGGKASKGGTGGEGGGGGGGG 317
Query: 239 -----------TERQVAKLMEENVGAAMQFLQSKALCIMP 267
TE+QVAK+MEE++G AMQ+LQ K LC+MP
Sbjct: 318 GGGGTGGGMRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMP 357
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 106/160 (66%), Gaps = 17/160 (10%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P + RVRARRGQATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVK
Sbjct: 198 PPRQQRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVK 257
Query: 185 FLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG------ 238
FL+LQVKVLSMSR+G +APLV + + S G
Sbjct: 258 FLQLQVKVLSMSRLGGAAGMAPLVASMSSEGNSNGSSNGSGGKASKGGTGGEGGGGGGGG 317
Query: 239 -----------TERQVAKLMEENVGAAMQFLQSKALCIMP 267
TE+QVAK+MEE++G AMQ+LQ K LC+MP
Sbjct: 318 GGGGTGGGMRVTEQQVAKMMEEDMGTAMQYLQGKGLCLMP 357
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 104/157 (66%), Gaps = 22/157 (14%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELV + NKTD+A+MLDEI+DYVKFL+
Sbjct: 142 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 201
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLM 247
LQ VLSMSR+G A TE+QVAKLM
Sbjct: 202 LQ--VLSMSRLGG----------------AARSRQGRDGAAAAAGSDGLAVTEQQVAKLM 243
Query: 248 EENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
EE++G AMQ+LQ K LC+MP+SLA AI H +PP
Sbjct: 244 EEDMGTAMQYLQGKGLCLMPVSLAAAISSATCHMRPP 280
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 118/160 (73%), Gaps = 13/160 (8%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ RVRARRGQATDPHSIAERLRRE+I++R++ LQELVP+ NKTD+A+ML+EI++Y+KFL+
Sbjct: 279 KARVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQ 338
Query: 188 LQVKVLSMSRVGAPGAVAPLV------TTDLPLSSVEDESGEGVRNQPAWEKWSNDG--- 238
LQ KVLSMSR+GA A+ PL+ ++ L + S + + G + + +D
Sbjct: 339 LQTKVLSMSRLGATDALVPLLMDSHNESSGLVMGSPKSGAAAGGKGHAGHRQTDSDDFVE 398
Query: 239 ----TERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
E++VA++ME+N+ AMQ+LQ++ LC+MPI+LA+AI
Sbjct: 399 DKVVLEQEVAQMMEDNMTMAMQYLQNRGLCLMPITLASAI 438
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 104/157 (66%), Gaps = 22/157 (14%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELV + NKTD+A+MLDEI+DYVKFL+
Sbjct: 114 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQ 173
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLM 247
LQ VLSMSR+G A TE+QVAKLM
Sbjct: 174 LQ--VLSMSRLGG----------------AARSRQGRDGAAAAAGSDGLAVTEQQVAKLM 215
Query: 248 EENVGAAMQFLQSKALCIMPISLATAI----YHSQPP 280
EE++G AMQ+LQ K LC+MP+SLA AI H +PP
Sbjct: 216 EEDMGTAMQYLQGKGLCLMPVSLAAAISSATCHMRPP 252
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 107/166 (64%), Gaps = 37/166 (22%)
Query: 139 TDPHSIAER----------------------LRRERIAERIRALQELVPSVNKTDRAAML 176
TDPHSIAER LRRERIAER++ALQELVP+ NKTD+A+ML
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 278
Query: 177 DEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE---- 232
DEI+DYVKFL+LQVKVLSMSR+G AVAPLV +SS + +G + E
Sbjct: 279 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVAN---MSSESNGNGNATSSSGNGEAANG 335
Query: 233 --KWSNDG------TERQVAKLMEENVGAAMQFLQSKALCIMPISL 270
N+G TE+QVAKLMEE++G+AMQ+LQ K LC+MPISL
Sbjct: 336 SSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 381
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 107/166 (64%), Gaps = 37/166 (22%)
Query: 139 TDPHSIAER----------------------LRRERIAERIRALQELVPSVNKTDRAAML 176
TDPHSIAER LRRERIAER++ALQELVP+ NKTD+A+ML
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 279
Query: 177 DEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE---- 232
DEI+DYVKFL+LQVKVLSMSR+G AVAPLV +SS + +G + E
Sbjct: 280 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVAN---MSSESNGNGNATSSSGNGEAANG 336
Query: 233 --KWSNDG------TERQVAKLMEENVGAAMQFLQSKALCIMPISL 270
N+G TE+QVAKLMEE++G+AMQ+LQ K LC+MPISL
Sbjct: 337 SSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 382
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 107/166 (64%), Gaps = 37/166 (22%)
Query: 139 TDPHSIAER----------------------LRRERIAERIRALQELVPSVNKTDRAAML 176
TDPHSIAER LRRERIAER++ALQELVP+ NKTD+A+ML
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANKTDKASML 279
Query: 177 DEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE---- 232
DEI+DYVKFL+LQVKVLSMSR+G AVAPLV +SS + +G + E
Sbjct: 280 DEIIDYVKFLQLQVKVLSMSRLGGASAVAPLVAN---MSSESNGNGNATSSSGNGEAANG 336
Query: 233 --KWSNDG------TERQVAKLMEENVGAAMQFLQSKALCIMPISL 270
N+G TE+QVAKLMEE++G+AMQ+LQ K LC+MPISL
Sbjct: 337 SSNGDNNGGGTLRVTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISL 382
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 79/87 (90%), Gaps = 3/87 (3%)
Query: 125 PAMRP---RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
PA +P RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+D
Sbjct: 238 PAAQPKQQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIID 297
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLV 208
YVKFL+LQVKVLSMSR+G AVAPLV
Sbjct: 298 YVKFLQLQVKVLSMSRLGGAAAVAPLV 324
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 91/129 (70%), Gaps = 12/129 (9%)
Query: 157 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS 216
++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AVAPLV D+ +
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV-ADMSSEA 59
Query: 217 VED------ESGEGVRNQPAWEKWS-NDG----TERQVAKLMEENVGAAMQFLQSKALCI 265
D G R + S ND TE QVAKLMEE++G+AMQ+LQ K LC+
Sbjct: 60 GGDCIQANANGGSIARTTNGNQTASTNDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCL 119
Query: 266 MPISLATAI 274
MPISLATAI
Sbjct: 120 MPISLATAI 128
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 74/81 (91%), Gaps = 2/81 (2%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+
Sbjct: 247 RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 306
Query: 188 LQVKVLSMSRVGAPGAVAPLV 208
LQ VLSMSR+G AVAPLV
Sbjct: 307 LQ--VLSMSRLGGAAAVAPLV 325
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 17/139 (12%)
Query: 146 ERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVA 205
+RLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G +A
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAGMA 210
Query: 206 PLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG-----------------TERQVAKLME 248
PLV + + S G G TE+QVAK+ME
Sbjct: 211 PLVASMSSEGNSNGSSNGGGGKASKGGTGGEGGGGGGGGGGGGTGGGMRVTEQQVAKMME 270
Query: 249 ENVGAAMQFLQSKALCIMP 267
E++G AMQ+LQ K LC+MP
Sbjct: 271 EDMGTAMQYLQGKGLCLMP 289
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 67/73 (91%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 197
ATDPHSIAERLRRERIAER+++LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 279
Query: 198 VGAPGAVAPLVTT 210
+G +APLV +
Sbjct: 280 LGGAAGMAPLVAS 292
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 65/69 (94%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
A +PRVRARRGQATDPHSIAERLRRE+I++R++ LQELVP+ N+TD+A+MLDEI++YVKF
Sbjct: 293 APKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKF 352
Query: 186 LRLQVKVLS 194
L+LQVKV S
Sbjct: 353 LQLQVKVRS 361
>gi|195620662|gb|ACG32161.1| hypothetical protein [Zea mays]
gi|413939309|gb|AFW73860.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 170
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 80/120 (66%), Gaps = 11/120 (9%)
Query: 169 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQ 228
+TD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AV LV ++S + SG+G +
Sbjct: 6 QTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGTLVA---GIASEGNGSGDGTSDS 62
Query: 229 --------PAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHSQPP 280
S TE+QVA+LMEE++G AMQ+LQ K LC+MPISLA+AI + P
Sbjct: 63 GKGNAANGENGGGGSLQVTEQQVARLMEEDMGTAMQYLQGKGLCLMPISLASAISSATWP 122
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 58/64 (90%)
Query: 147 RLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAP 206
+LRRERIAER++ALQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR+G AV P
Sbjct: 140 QLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVGP 199
Query: 207 LVTT 210
LV +
Sbjct: 200 LVAS 203
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 9/117 (7%)
Query: 80 EQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQAT 139
E + G +K EE S G +N + +P P PP VRARRGQAT
Sbjct: 343 EGNENGQVKAEEESKGGNNSNANDEKQNKSNSKP--------PEPPKDYIHVRARRGQAT 394
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
D HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 395 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 451
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 76 GLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARR 135
G +GK P+EA G+ K PE+ P AA VRARR
Sbjct: 101 GCKRPRGKQQLRDPDEAGGAAKGRPEKP------KACARKKPEAAAAGQKTDYIHVRARR 154
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 194
GQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ QV+ LS
Sbjct: 155 GQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLS 214
Query: 195 MSRVGAPGAVAPLVTTDL 212
M A V + DL
Sbjct: 215 MKIAAANPVVNFNIVDDL 232
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 363 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 422
Query: 181 DYVKFLRLQVKVLSMSRVGAPG----AVAPLVTTDL 212
+YV+ L+ QV+ LSM ++ LVT D+
Sbjct: 423 NYVQSLQRQVEFLSMKLASVNTRMDLSIESLVTKDV 458
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 10/114 (8%)
Query: 83 KGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPH 142
K G +K EE S +G + +N+ +P P PP VRARRGQATD H
Sbjct: 251 KNGSVKAEEDSKAGTSSGGDEK-QNMSSSKP--------PEPPKDYIHVRARRGQATDSH 301
Query: 143 SIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
S+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 302 SLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVEFLSM 355
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 330 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 389
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 390 NYVQSLQRQVEFLSM 404
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 364 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 423
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 424 NYVQSLQRQVEFLSM 438
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 341 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 400
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 401 NYVQSLQRQVEFLSM 415
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 349 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 408
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 409 NYVQSLQRQVEFLSM 423
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Query: 80 EQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQAT 139
++ K K +E +GS K +E +N Q + P P PP VRARRGQAT
Sbjct: 320 DESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKP--PEPPKDYIHVRARRGQAT 377
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
D HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 378 DSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 434
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 7/109 (6%)
Query: 88 KPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAER 147
K +EA+G K E++ Q P PP VRARRGQATD HS+AER
Sbjct: 309 KSDEANGHDKAKAEQNG------NQKQNKDNTKLPEPPKDYIHVRARRGQATDSHSLAER 362
Query: 148 LRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 363 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSM 411
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 376 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 435
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 436 NYVQSLQRQVEFLSM 450
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+FL+ QV+ LSM
Sbjct: 233 INYVQFLQNQVEFLSM 248
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK T +A MLDEI+
Sbjct: 344 PEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEII 403
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 404 NYVQSLQRQVEFLSM 418
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 292 PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 351
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 352 NYVQSLQRQVEFLSM 366
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 206 VEFLSMKIA----ASNPVVSFDI----VEDLFGRQLK 234
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 206 VEFLSMKIA----ASNPVVSFDI----VEDLFGRQLK 234
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 224 VEFLSM 229
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 292 PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 351
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 352 NYVQSLQRQVEFLSM 366
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 224 VEFLSM 229
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 115 PSPVPAAPHPPAMRPR----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
P PV P PR VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK
Sbjct: 174 PPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKV 233
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG 222
+A MLDEI++YV+ L+ QV+ LSM V PL ++LP +D G
Sbjct: 234 IGKALMLDEIINYVQSLQRQVEFLSMKLA----TVNPLDLSNLPTLLQKDACG 282
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 290 PEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEII 349
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 350 NYVQSLQRQVEFLSM 364
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
+A P VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDE
Sbjct: 221 SAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 280
Query: 179 IVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDL 212
I++YV+ L+ QV+ LSM V P V D+
Sbjct: 281 IINYVQSLQQQVEFLSMKLA----TVNPDVNVDI 310
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 9/90 (10%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 161 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 220
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
V+ LSM A P+V D+ VED
Sbjct: 221 VEFLSMK----IAASNPVVNFDI----VED 242
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 153 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 212
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 213 VEFLSMK----IAASNPVVSFDI----VEDLFGRQLK 241
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 18 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 77
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 78 NYVQSLQRQVEFLSM 92
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVD 181
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++
Sbjct: 182 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIIN 241
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
YV+ L+ QV+ LSM V PL ++LP
Sbjct: 242 YVQSLQRQVEFLSMKLA----TVNPLDFSNLP 269
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++Y
Sbjct: 186 PPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINY 245
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
V+ L+ QV+ LSM V PL ++LP
Sbjct: 246 VQSLQRQVEFLSMKLA----TVNPLDFSNLP 272
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++Y
Sbjct: 187 PPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINY 246
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
V+ L+ QV+ LSM V PL ++LP
Sbjct: 247 VQSLQRQVEFLSMKLA----TVNPLDLSNLP 273
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 203 VEFLSMK----IAASNPVVSFDI----VEDLFGRQLK 231
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLD 177
P P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLD
Sbjct: 360 PKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 419
Query: 178 EIVDYVKFLRLQVKVLSM 195
EI++YV+ L+ QV+ LSM
Sbjct: 420 EIINYVQSLQRQVEFLSM 437
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVD 181
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
YV+ L+ QV+ LSM V PL ++LP
Sbjct: 256 YVQSLQRQVEFLSMKLA----TVNPLDFSNLP 283
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLD 177
P P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLD
Sbjct: 360 PKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 419
Query: 178 EIVDYVKFLRLQVKVLSM 195
EI++YV+ L+ QV+ LSM
Sbjct: 420 EIINYVQSLQRQVEFLSM 437
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 282 PEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 341
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 342 NYVQSLQRQVEFLSM 356
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVD 181
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
YV+ L+ QV+ LSM V PL ++LP
Sbjct: 256 YVQSLQRQVEFLSMKLA----TVNPLDFSNLP 283
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 11/97 (11%)
Query: 100 PEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRA 159
P +HA N +G+ P VRARRGQAT+ HS+AER+RRE+I+ER+R
Sbjct: 244 PNKHAKDNSSNGEA----------PKENYIHVRARRGQATNSHSLAERVRREKISERMRL 293
Query: 160 LQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
LQELVP NK T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 294 LQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 330
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 203 VEFLSMK----IAASNPVVSFDI----VEDLFGRQLK 231
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVD 181
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
YV+ L+ QV+ LSM V PL ++LP
Sbjct: 256 YVQSLQRQVEFLSMKLA----TVNPLDFSNLP 283
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+ + +PAA P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 106 GKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKV 165
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A++LDEI++Y++ L+ QV+ LSM
Sbjct: 166 IGKASVLDEIINYIQSLQCQVEFLSM 191
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER+R LQ LVP +K T +A MLDEI++Y
Sbjct: 129 PPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINY 188
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLV 208
V+ L+ QV+ LSM +++P+V
Sbjct: 189 VQTLQTQVEFLSMKLT----SISPVV 210
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 9/97 (9%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM A P+V+ D+ VED G ++
Sbjct: 203 VEFLSMK----IAASNPVVSFDI----VEDLFGRQLK 231
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 68/104 (65%), Gaps = 9/104 (8%)
Query: 115 PSPVPAAPHPPAMRPR----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
P PV P PR VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK
Sbjct: 174 PPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKV 233
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
+A MLDEI++YV+ L+ QV+ LSM V PL ++LP
Sbjct: 234 IGKALMLDEIINYVQSLQRQVEFLSMKLA----TVNPLDLSNLP 273
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLD 177
P P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLD
Sbjct: 251 PKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLD 310
Query: 178 EIVDYVKFLRLQVKVLSM 195
EI++YV+ L+ QV+ LSM
Sbjct: 311 EIINYVQSLQRQVEFLSM 328
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 268 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 327
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 328 QVEFLSM 334
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP NK T +A M+DEI+
Sbjct: 209 PEPPKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEII 268
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 269 NYVQSLQCQVEFLSM 283
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V+ LSM + V + DL
Sbjct: 224 VEFLSMKIAASNPVVNFNIVEDL 246
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A P VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDE
Sbjct: 142 ANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDE 201
Query: 179 IVDYVKFLRLQVKVLSMSRVG-APGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
I++YV+ L+ QV+ LSM P + D + +D+S G+ Q A + +
Sbjct: 202 IINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLDALMVRPDDQSLSGLETQMANIQQGST 261
Query: 238 GTERQVAKLMEENVGAAMQFL 258
T Q A+++ N + QFL
Sbjct: 262 TTTSQAAEVI-ANTNSGYQFL 281
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 262 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 321
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
G+ S PAA PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK
Sbjct: 154 QGKGKNSSKPAA-EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNK 212
Query: 170 -TDRAAMLDEIVDYVKFLRLQVKVLSM 195
+A MLDEI++YV+ L+ QV+ LSM
Sbjct: 213 VVGKALMLDEIINYVQSLQQQVEFLSM 239
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
G+ S PAA PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK
Sbjct: 154 QGKGKNSSKPAA-EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNK 212
Query: 170 -TDRAAMLDEIVDYVKFLRLQVKVLSM 195
+A MLDEI++YV+ L+ QV+ LSM
Sbjct: 213 VVGKALMLDEIINYVQSLQQQVEFLSM 239
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRERI++R++ LQ+LVP NK +A MLDEI++Y
Sbjct: 178 PPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIINY 237
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
V+ L+ QV+ LSM V PL ++LP
Sbjct: 238 VQSLQRQVEFLSMKLA----TVNPLDFSNLP 264
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 239 HVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQ 298
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 299 QVEFLSM 305
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER+RRERI+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 234 VRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 293
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 294 VEFLSM 299
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+
Sbjct: 241 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 300
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 301 QVEFLSM 307
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 394 TPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 453
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 454 INYVQSLQRQVEFLSM 469
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 245 PEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 304
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 305 NYVQSLQHQVEFLSM 319
>gi|356514806|ref|XP_003526094.1| PREDICTED: uncharacterized protein LOC100782991 [Glycine max]
Length = 390
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 60/69 (86%)
Query: 102 EHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQ 161
E ++ FH QP+P+ VP APHPPA+RPRVRARRGQ TDPHSIAERL RERIAERIRALQ
Sbjct: 285 ESQLREFFHAQPMPTTVPTAPHPPAVRPRVRARRGQTTDPHSIAERLHRERIAERIRALQ 344
Query: 162 ELVPSVNKT 170
ELVPSVNKT
Sbjct: 345 ELVPSVNKT 353
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVPS NK T +A MLDEI++YV+ L+ Q
Sbjct: 32 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQ 91
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 92 VEFLSM 97
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+ + +PAA P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 104 GKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKV 163
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A++LDEI++Y++ L+ QV+ LSM
Sbjct: 164 IGKASVLDEIINYIQSLQCQVEFLSM 189
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
+A P VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDE
Sbjct: 68 SAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 127
Query: 179 IVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDL 212
I++YV+ L+ QV+ LSM V P V D+
Sbjct: 128 IINYVQSLQQQVEFLSM----KLATVNPDVNVDI 157
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 207 PEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEII 266
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 267 NYVQSLQHQVEFLSM 281
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI+
Sbjct: 49 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 108
Query: 181 DYVKFLRLQVKVLSMS 196
+YV+ L+ QV+ LSM
Sbjct: 109 NYVQSLQRQVEFLSMK 124
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQATD HS+AER+RRE+I ER++ LQ LVPS NK T +A MLDEI++YV+ L+
Sbjct: 257 HVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQR 316
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 317 QVEFLSM 323
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 163 VRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 222
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 223 VEFLSM 228
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER+R LQ LVP +K T +A MLDEI++Y
Sbjct: 130 PPKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINY 189
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLV 208
V+ L+ QV+ LSM +++P+V
Sbjct: 190 VQTLQNQVEFLSMKLT----SISPVV 211
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 122 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQ 181
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 182 VEFLSM 187
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 251 VEFLSM 256
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 65 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 124
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 125 NYVQSLQRQVEFLSM 139
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 251 VEFLSM 256
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN-KTDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER+R LQELVP + KT +A MLDEI++YV+ L+
Sbjct: 230 HVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQ 289
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 290 QVEFLSM 296
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 268 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 327
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 328 NYVQSLQRQVEFLSM 342
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
V+ LSM V P + D+ +D RN P
Sbjct: 266 VEFLSMKLA----TVNPEINIDIDRILAKDLLQSRDRNTPT 302
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 11/120 (9%)
Query: 77 LSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRG 136
+S+E G EE SG GK G+ S +P PP VRARRG
Sbjct: 220 MSMEDG-------EENSGKGKAAQSSSENGGKKQGKDGASKLP---EPPKDFIHVRARRG 269
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 270 EATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 204 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 263
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
V+ LSM V P + D+ +D RN P
Sbjct: 264 VEFLSMKLA----TVNPEINIDIDRILAKDLLQSRDRNTPT 300
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 11/120 (9%)
Query: 77 LSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRG 136
+S+E G EE SG GK G+ S +P PP VRARRG
Sbjct: 220 MSMEDG-------EENSGKGKAAQSSSENGGKKQGKDGASKLP---EPPKDFIHVRARRG 269
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 270 EATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSM 329
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RRERI+ER++ LQ LVP NK T +A MLDEI+
Sbjct: 102 PEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEII 161
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 162 NYVQSLQRQVEFLSM 176
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 243 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 302
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 303 NYVQSLQRQVEFLSM 317
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 154 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 213
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
V+ LSM V P + D+ +D RN P
Sbjct: 214 VEFLSMKLA----TVNPEINIDIDRILAKDLLQSRDRNTPT 250
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 318 VEFLSM 323
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RRERI+ER++ LQ LVP NK T +A MLDEI+
Sbjct: 72 PEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEII 131
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 132 NYVQSLQRQVEFLSM 146
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 318 VEFLSM 323
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 83 KGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPH 142
KGG ++ +GS K E+ K P P P VRARRGQATD H
Sbjct: 149 KGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKP------PEAPKDYIHVRARRGQATDSH 202
Query: 143 SIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
S+AER RRE+I+ER+ LQ+LVP N+ T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 203 SLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM 256
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 185 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 244
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 245 VEFLSM 250
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 261 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 320
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 321 NYVQSLQRQVEFLSM 335
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 83 KGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPH 142
KGG ++ +GS K E+ K P P P VRARRGQATD H
Sbjct: 152 KGGKRSKQDEAGSSKNGVEKCDSKGDNKDDAKP------PEAPKDYIHVRARRGQATDSH 205
Query: 143 SIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
S+AER RRE+I+ER+ LQ+LVP N+ T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 206 SLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSM 259
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 252 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 311
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 312 VEFLSM 317
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+ S PAA PP VRARRGQATD HS+AER+RRE+I +++ LQ+LVP NK
Sbjct: 48 GKVSKSKQPAADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKV 107
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A MLDEI++YV+ L+ QV+ LSM
Sbjct: 108 IGKALMLDEIINYVQSLQQQVEFLSM 133
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 206 VEFLSM 211
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 318 VEFLSM 323
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 271 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 330
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 331 NYVQSLQRQVEFLSM 345
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P P VRARRGQATD HS+AER+RR+RI+ER++ LQ LVP NK T +A MLDEI+
Sbjct: 238 PEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEII 297
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 298 NYVQSLQRQVEFLSM 312
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 315
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 316 VEFLSM 321
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PPA VRARRGQATD HS+AER+RRERI+ER++ LQ LVP +K T +A MLDEI++Y
Sbjct: 167 PPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINY 226
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 227 VQSLQNQVEFLSM 239
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 123 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 182
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
V+ LSM A++P + DL L +
Sbjct: 183 VEFLSMK----LSAISPELNCDLDLQDI 206
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 33 VRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQ 92
Query: 190 VKVLSMSRVGAPGAVAPLVTTD 211
V+ LSM AV P + TD
Sbjct: 93 VEFLSMK----LAAVKPALYTD 110
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 237 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 296
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 297 VEFLSM 302
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 107 NVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPS 166
N G+ L P P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP
Sbjct: 124 NSSDGKKLAEQSPK-PEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
Query: 167 VNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 195
NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 167 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 226
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 227 VEFLSM 232
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 363 VEFLSM 368
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 204
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 205 VEFLSM 210
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
++ LSM A+ P + DL L +D
Sbjct: 158 IEFLSMK----LSAIGPGLNCDLDLQDEQD 183
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I +R++ LQ+LVP+ NK T +A MLDEI++YV+ L+ Q
Sbjct: 296 VRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQ 355
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 356 VEFLSM 361
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 361
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 362 VEFLSM 367
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 363 VEFLSM 368
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 125 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 184
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
V+ LSM ++P + +DL L +
Sbjct: 185 VEFLSMKL----STISPELNSDLDLQDI 208
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 309 VEFLSM 314
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
++ LSM A+ P + DL L +D
Sbjct: 184 IEFLSMK----LSAIGPGLNCDLDLQDEQD 209
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A PPA VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDE
Sbjct: 169 AGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDE 228
Query: 179 IVDYVKFLRLQVKVLSM 195
I+ YV+ L+ QV+ LSM
Sbjct: 229 IISYVQSLQNQVEFLSM 245
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 363 VEFLSM 368
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A PPA VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDE
Sbjct: 169 AGGEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDE 228
Query: 179 IVDYVKFLRLQVKVLSM 195
I+ YV+ L+ QV+ LSM
Sbjct: 229 IISYVQSLQNQVEFLSM 245
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIV 180
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI+
Sbjct: 160 PEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 219
Query: 181 DYVKFLRLQVKVLSM 195
+Y++ L+ QV+ LSM
Sbjct: 220 NYIQSLQRQVEFLSM 234
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 234 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 293
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 294 VEFLSM 299
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 270 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 329
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 330 NYVQSLQRQVEFLSM 344
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 190 VKVLSM 195
++ LSM
Sbjct: 232 IEFLSM 237
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++Y
Sbjct: 140 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINY 199
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 200 VQSLQNQVEFLSM 212
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++Y
Sbjct: 116 PPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINY 175
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 176 VQSLQNQVEFLSM 188
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK +A MLDEI++YV+ L+ Q
Sbjct: 211 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQ 270
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 271 VEFLSM 276
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 190 VKVLSM 195
++ LSM
Sbjct: 232 IEFLSM 237
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 309 VEFLSM 314
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 190 VKVLSM 195
++ LSM
Sbjct: 232 IEFLSM 237
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 118 IRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 177
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
V+ LSM AV+P + DL +
Sbjct: 178 VEFLSMKL----SAVSPELNCDLDFQDI 201
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 15/122 (12%)
Query: 76 GLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRP-RVRAR 134
G ++E G GG E +S +G +E + K P+ PP VRAR
Sbjct: 76 GSTVENG-GGLKAAEASSVAGSNNSDEQSTK------------PSESEPPKQDYIHVRAR 122
Query: 135 RGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVL 193
RGQATD HSIAER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV+ L
Sbjct: 123 RGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEIINYIQSLQHQVEFL 182
Query: 194 SM 195
SM
Sbjct: 183 SM 184
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 190 VKVLSM 195
++ LSM
Sbjct: 232 IEFLSM 237
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Query: 120 AAPHPPAMRPR----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAA 174
+A PPA P+ VRARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A
Sbjct: 265 SATKPPAEAPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAV 324
Query: 175 MLDEIVDYVKFLRLQVKVLSM 195
MLDEI++YV+ L+ QV+ LSM
Sbjct: 325 MLDEIINYVQSLQRQVEFLSM 345
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAML 176
V A PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP +K T +A ML
Sbjct: 243 VAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVML 302
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DEI++YV+ L+ QV+ LSM
Sbjct: 303 DEIINYVQSLQRQVEFLSM 321
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER+ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 194 VRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 253
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 254 VEFLSM 259
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
V+V + G+ D SVE
Sbjct: 206 VEVNGTAAAWDIGSQNLFSGFDAQFQSVE 234
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP RARRG+ATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI+
Sbjct: 243 PEPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 302
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV+ LSM
Sbjct: 303 NYVQSLQRQVEFLSM 317
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A P VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDE
Sbjct: 153 ANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDE 212
Query: 179 IVDYVKFLRLQVKVLSM 195
I++YV+ L+ QV+ LSM
Sbjct: 213 IINYVQSLQNQVEFLSM 229
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 169 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 228
Query: 190 VKVLSM 195
++ LSM
Sbjct: 229 IEFLSM 234
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 54 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 113
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 114 VESLSM 119
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER+R LQEL P NK T +A MLDEI++YV+ L+ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
V+ LSM V P + D+ +D RN P
Sbjct: 266 VEFLSMKLA----TVNPEINIDIDRILAKDLLQSRDRNTPT 302
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
++ LSM A+ P + DL L +
Sbjct: 158 IEFLSMK----LSAIGPGLNCDLDLQDI 181
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++Y
Sbjct: 165 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINY 224
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 225 VQSLQNQVEFLSM 237
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 305 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQ 364
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 365 VEFLSM 370
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 181
HP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVPS +K T +A MLDEI++
Sbjct: 17 HPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIIN 76
Query: 182 YVKFLRLQVKVLSM 195
YV+ L+ Q++ LSM
Sbjct: 77 YVQSLQRQIEFLSM 90
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++Y
Sbjct: 157 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINY 216
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 217 VQSLQNQVEFLSM 229
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 125 VRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQ 184
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 185 VEFLSM 190
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
++ LSM A+ P + DL L +
Sbjct: 184 IEFLSMK----LSAIGPGLNCDLDLQDI 207
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 171 VEFLSM 176
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 207 INYVQSLQQQVEFLSM 222
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
++ LSM A+ P + DL L +
Sbjct: 184 IEFLSMK----LSAIGPGLNCDLDLQDI 207
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 256 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 316 VEFLSM 321
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 207 INYVQSLQQQVEFLSM 222
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 207 INYVQSLQQQVEFLSM 222
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 171 VEFLSM 176
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 441 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 500
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 501 VENLSM 506
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 147 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 206
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 207 INYVQSLQQQVEFLSM 222
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 301 VEFLSM 306
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 307 QVEFLSM 313
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 247 HVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 306
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 307 QVEFLSM 313
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 109 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 168
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 169 VEFLSM 174
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER+R LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 401 VEFLSM 406
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER+R LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 401 VEFLSM 406
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 206 INYVQSLQQQVEFLSM 221
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 115 PSPVPAAPH-PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDR 172
P V P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +
Sbjct: 155 PKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGK 214
Query: 173 AAMLDEIVDYVKFLRLQVKVLSM 195
A MLDEI++YV+ L+ QV+ LSM
Sbjct: 215 ALMLDEIINYVQSLQNQVEFLSM 237
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 16/189 (8%)
Query: 29 SGLAASDGGLAAGSPMMLQLSSGDGSSHISALGG-GVSSGYHGQVFPLGLSLEQGK---G 84
SG +G L S ++ + S + S + GG G GQ G S ++ K
Sbjct: 73 SGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGK 132
Query: 85 GFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSI 144
+ E+ ++ P +A K QP S H +RARRGQAT+ HS+
Sbjct: 133 DCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIH-------MRARRGQATNSHSL 185
Query: 145 AERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGA 203
AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q++ LSM A
Sbjct: 186 AERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKL----SA 241
Query: 204 VAPLVTTDL 212
V P++ +L
Sbjct: 242 VNPVLDFNL 250
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 16/189 (8%)
Query: 29 SGLAASDGGLAAGSPMMLQLSSGDGSSHISALGG-GVSSGYHGQVFPLGLSLEQGK---G 84
SG +G L S ++ + S + S + GG G GQ G S ++ K
Sbjct: 124 SGSKLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGK 183
Query: 85 GFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSI 144
+ E+ ++ P +A K QP S H +RARRGQAT+ HS+
Sbjct: 184 DCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIH-------MRARRGQATNSHSL 236
Query: 145 AERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGA 203
AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q++ LSM A
Sbjct: 237 AERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKL----SA 292
Query: 204 VAPLVTTDL 212
V P++ +L
Sbjct: 293 VNPVLDFNL 301
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 253 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 312
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 313 VEFLSM 318
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRA+RGQAT+ HS+AER+RRERI+ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 245 HVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQR 304
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 305 QVEFLSM 311
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIV 180
PHP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI+
Sbjct: 103 PHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEII 162
Query: 181 DYVKFLRLQVKVLSM 195
+Y++ L QV+ LSM
Sbjct: 163 NYIQSLHHQVEFLSM 177
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 122 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 181
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 182 VEFLSM 187
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 301 VEFLSM 306
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 199 VEFLSM 204
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 206 INYVQSLQQQVEFLSM 221
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
QV+ LSM ++P + +DL L +
Sbjct: 687 QVEFLSMKL----STISPELNSDLDLQDI 711
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 111 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 170
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 171 VEFLSM 176
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
QV+ LSM ++P + +DL L +
Sbjct: 687 QVEFLSMKL----STISPELNSDLDLQDI 711
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 337
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 338 VEFLSM 343
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 121 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 180
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 181 VEFLSM 186
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 199 VEFLSM 204
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 16/131 (12%)
Query: 66 SGYHGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPP 125
SG + Q+ G S+E GF EAS +G E + K P +P H
Sbjct: 89 SGSNKQMKLGGSSVEND--GFKAEAEASSAGGNKSSEQSNK------PCEAPKQDYIH-- 138
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVK 184
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++
Sbjct: 139 -----VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQ 193
Query: 185 FLRLQVKVLSM 195
L+ QV+ LSM
Sbjct: 194 SLQRQVEFLSM 204
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 112 QPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 170
+P + PA P P VRARRGQATD HS+AER RRERI+ER++ LQ+LVP NK
Sbjct: 75 KPDKNSKPAEP-PKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVI 133
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSM------SRVGAPGAVAPLVTTDLPLSSVE 218
+A +LDEI++Y++ L+ QV+ LSM SR+ + + DL L ++
Sbjct: 134 GKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGFHSKDLGLQPID 187
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 629 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 688
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 689 VEFLSM 694
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 131 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQ 190
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 191 VEFLSM 196
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 5/89 (5%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 627 HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQR 686
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
QV+ LSM ++P + +DL L +
Sbjct: 687 QVEFLSMKL----STISPELNSDLDLQDI 711
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 317
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 318 VEFLSM 323
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
+RPR ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K
Sbjct: 114 TVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQ 173
Query: 186 LRLQVKVLSMSR------VGAPGAVAPLVTTDLPLSSVEDESGEGVRN 227
L+LQV++L+M + PG + P+ LPL+ + + G G+ N
Sbjct: 174 LQLQVQMLTMRNGLSLHPMCLPGVLQPM---QLPLTGMSFDEGGGLLN 218
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 429 VEFLSM 434
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 128 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 187
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
++ LSM A+ P + DL L +
Sbjct: 188 IEFLSMK----LSAIGPGLNCDLDLQDI 211
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 120 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 179
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 180 VEFLSM 185
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK +A MLDEI++YV+ L+ Q
Sbjct: 143 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 202
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 203 VEFLSM 208
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 107 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 166
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 167 VEFLSM 172
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 146 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 205
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 206 INYVQSLQQQVEFLSM 221
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER+R LQELVP NK T +A MLDEI++Y++ L+ Q
Sbjct: 48 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQ 107
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V+ LSM V P + D+
Sbjct: 108 VEFLSMK----LATVNPDINIDI 126
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+L+P NK +A MLDEI++YV+ L+ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 252 VEFLSM 257
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R++ LQ+LVP NK +A MLDEI
Sbjct: 148 AVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEI 207
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 208 INYVQSLQQQVEFLSM 223
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 138 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 197
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 198 VEFLSM 203
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 77 LSLEQGKGGFLKPE------EASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPR 130
+ L+Q KG E EA G + P + N G+ A+ P
Sbjct: 313 IELDQAKGNLQSVEAAKDNVEAQQKGDQTPT--STPNKTSGKQGKQGSQASDPPKEEYIH 370
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 371 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 430
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 431 VEFLSM 436
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 70/97 (72%), Gaps = 7/97 (7%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRAR+GQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVR 226
V+ LSM AV P + DL + S+ + S + +R
Sbjct: 236 VEFLSMKL----SAVNPRI--DLDIESLVNNSKDVLR 266
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 65/89 (73%), Gaps = 7/89 (7%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 252 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 311
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
QV+ LSM +V P T DL + S+
Sbjct: 312 QVEFLSMKLA----SVNP--TLDLNIESI 334
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P VRARRGQATD HS+AER RRE+I++++++LQ+LVP NK T RA MLDEI++Y
Sbjct: 195 PKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINY 254
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 255 VQSLQRQVEFLSM 267
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQELVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 325 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 384
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 385 VEFLSM 390
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS++ER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 105 VRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQ 164
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 165 VEFLSM 170
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+L+P NK +A MLDEI++YV+ L+ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 252 VEFLSM 257
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 207
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 208 VEFLSM 213
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER++ LQELVP +K +A+ LDEI++YV+ L+ Q
Sbjct: 132 VRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQ 191
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 192 VEFLSMKLAAA 202
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 239
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 240 VEFLSM 245
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 257 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 316
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 317 QVEFLSM 323
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++Y
Sbjct: 164 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINY 223
Query: 183 VKFLRLQVKVLSM 195
V+ L+ QV+ LSM
Sbjct: 224 VQSLQNQVEFLSM 236
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-------- 169
+ AA PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK
Sbjct: 132 LDAAGEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKI 191
Query: 170 -------TDRAAMLDEIVDYVKFLRLQVKVLSM 195
T +A MLDEI++YV+ L+ QV+ LSM
Sbjct: 192 NLNFTLVTGKAVMLDEIINYVQSLQRQVEFLSM 224
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 256 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 316 VEFLSM 321
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 168 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 227
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM AV P++ +L
Sbjct: 228 IEFLSM----KLSAVNPVLDFNL 246
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 248 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 307
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 308 QVEFLSM 314
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 429 VEFLSM 434
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 129 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 188
Query: 190 VKVLS 194
V+ LS
Sbjct: 189 VEFLS 193
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 257 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 316
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 317 VEFLSM 322
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 407 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 466
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 467 VEFLSM 472
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RARRGQAT+ HS+AERLRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 246 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 305
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 306 VEFLSM 311
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDE 178
A PP VRARRGQATD HS+AER+RRE+I +++ LQ+LVP NK +A MLDE
Sbjct: 166 ADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDE 225
Query: 179 IVDYVKFLRLQVKVLSM 195
I++YV+ L+ QV+ LSM
Sbjct: 226 IINYVQSLQQQVEFLSM 242
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 319 QVEFLSM 325
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Query: 119 PAAPHPPAMRP-RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAML 176
P P PP VRARRGQATD HSIAER RRE+I+ER++ LQ+LVP NK +A++L
Sbjct: 99 PTPPEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVL 158
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DEI++Y++ L+ QV+ LSM
Sbjct: 159 DEIINYIQALQRQVEFLSM 177
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+
Sbjct: 137 HLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQR 196
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 197 QVEFLSM 203
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRERI+ER+R LQ LVP +K T +A +LDEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 199 VEFLSM 204
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 259 HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 318
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 319 QVEFLSM 325
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
Query: 112 QPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 170
QPL +P H VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 47 QPLEAPKQDYIH-------VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI 99
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A++LDEI++Y++ L+ QV+ LSM
Sbjct: 100 GKASVLDEIINYIQALQRQVEFLSM 124
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 120 AAPHPPAMRPR-----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRA 173
A PP P+ VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A
Sbjct: 60 ATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKA 119
Query: 174 AMLDEIVDYVKFLRLQVKVLSM 195
MLDEI++YV+ L+ Q++ LSM
Sbjct: 120 VMLDEIINYVQSLQRQIEFLSM 141
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 361
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 362 VEFLSM 367
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TD 171
P S V +P P + VRARRGQATD HS+AER RRE+I+++++ LQ+LVP NK T
Sbjct: 174 PNASKVSGSPKPDYIH--VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITG 231
Query: 172 RAAMLDEIVDYVKFLRLQVKVLSM 195
+A MLDEI++YV+ L+ QV+ LS+
Sbjct: 232 KAGMLDEIINYVQSLQRQVEFLSL 255
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 73 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 132
Query: 190 VKVLSM 195
++ LSM
Sbjct: 133 IEFLSM 138
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP K T +A MLDEI++YV+ L+ Q
Sbjct: 388 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 447
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 448 VESLSM 453
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 239 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 298
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 299 VEFLSM 304
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 135 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQ 194
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 195 VEFLSM 200
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 113 PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TD 171
P S V +P P + VRARRGQATD HS+AER RRE+I+++++ LQ+LVP NK T
Sbjct: 174 PNASKVSGSPKPDYIH--VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITG 231
Query: 172 RAAMLDEIVDYVKFLRLQVKVLSM 195
+A MLDEI++YV+ L+ QV+ LS+
Sbjct: 232 KAGMLDEIINYVQSLQRQVEFLSL 255
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ LVP K T +A MLDEI++YV+ L+
Sbjct: 258 HVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQR 317
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 318 QVEFLSM 324
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 64 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 123
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 124 VEFLSM 129
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 357 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 416
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 417 QVEFLSM 423
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 115 PSPVPAAPHPPAMRPR-----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
P + A PP + VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K
Sbjct: 48 PRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSK 107
Query: 170 -TDRAAMLDEIVDYVKFLRLQVKVLSM 195
T +A MLDEI++YV+ L+ Q++ LSM
Sbjct: 108 ITGKAVMLDEIINYVQSLQRQIEFLSM 134
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 368 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 427
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 428 VEFLSM 433
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 317 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 376
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 377 VEFLSM 382
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV 180
A P + R ++RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE +
Sbjct: 305 AKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 364
Query: 181 DYVKFLRLQVKVLSM 195
+Y+K L+LQV+++SM
Sbjct: 365 EYLKTLQLQVQIMSM 379
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV 180
A P + R ++RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE +
Sbjct: 305 AKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 364
Query: 181 DYVKFLRLQVKVLSM 195
+Y+K L+LQV+++SM
Sbjct: 365 EYLKTLQLQVQIMSM 379
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV 180
A P + R ++RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE +
Sbjct: 305 AKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 364
Query: 181 DYVKFLRLQVKVLSM 195
+Y+K L+LQV+++SM
Sbjct: 365 EYLKTLQLQVQIMSM 379
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 14/112 (12%)
Query: 85 GFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSI 144
GF EAS G E + K P +P P H VRARRGQATD HS+
Sbjct: 81 GFKAEAEASSVGGNKSSEQSNK------PCEAPKPDYIH-------VRARRGQATDSHSL 127
Query: 145 AERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 195
AER RRE+I+ER++ LQ+L P NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 128 AERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 179
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV 180
A P + R ++RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE +
Sbjct: 305 AKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 364
Query: 181 DYVKFLRLQVKVLSM 195
+Y+K L+LQV+++SM
Sbjct: 365 EYLKTLQLQVQIMSM 379
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 221 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 280
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 281 VEFLSM 286
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIV 180
A P + R ++RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE +
Sbjct: 305 AKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 364
Query: 181 DYVKFLRLQVKVLSM 195
+Y+K L+LQV+++SM
Sbjct: 365 EYLKTLQLQVQIMSM 379
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 245 VEFLSM 250
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 245 VEFLSM 250
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 245 VEFLSM 250
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 53/62 (85%), Gaps = 1/62 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP K T +A MLDEI++YV+FL+ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQ 65
Query: 190 VK 191
V+
Sbjct: 66 VE 67
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 150 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 209
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 210 VEFLSM 215
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 168 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 227
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 228 VEFLSM 233
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ+LVP NK T RA MLDEI++YV+ L+ Q
Sbjct: 37 VRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 96
Query: 190 VKVLSM 195
V+ +SM
Sbjct: 97 VEFISM 102
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P PP + + RA G ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V
Sbjct: 255 PAPPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQ 314
Query: 182 YVKFLRLQVKVLS 194
YVKFL+LQ+K+LS
Sbjct: 315 YVKFLQLQIKLLS 327
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 14/121 (11%)
Query: 82 GKGGFLKPEEASGSGKR-FPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATD 140
G+ G LKP+ + +G + PE AI+ Q VP ++RA+RG AT
Sbjct: 286 GRSGQLKPQFSLPAGSKPSPEIAAIEKFLQFQ---DSVPC---------KIRAKRGCATH 333
Query: 141 PHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
P SIAER+RR +I+ERIR LQELVP++ K T+ + MLD VDY+K L++QVKV++ R G
Sbjct: 334 PRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMNDGRAG 393
Query: 200 A 200
Sbjct: 394 C 394
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 32/185 (17%)
Query: 23 NFGSAESGLAASDGGLAAGSPMMLQLSSG----------DGSSHISALGGG-VSSGYHGQ 71
N G + AS GG PM+L+ S G +G +S GGG V++ G+
Sbjct: 52 NAGVGGANREASGGG---DDPMVLERSGGRKRRDAATEDEGGKAVSTSGGGNVANDCDGK 108
Query: 72 VFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRV 131
S ++ + + E +SG +P+ +A P V
Sbjct: 109 RLKTSGSRDENRDSKTEVETSSG-----------------KPVEQNPQSADPPKQDFIHV 151
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQV 190
RARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV
Sbjct: 152 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 211
Query: 191 KVLSM 195
+ LSM
Sbjct: 212 EFLSM 216
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+P+ +A P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 131 GKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 190
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 191 IGKALVLDEIINYIQSLQRQVEFLSM 216
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 245 VEFLSM 250
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 76 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 135
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 136 VEFLSM 141
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 30/159 (18%)
Query: 78 SLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPR-----VR 132
++++G GG K +AS SG+ E + K P + PP+ P+ VR
Sbjct: 85 AVDEGGGGDGKRIKASESGEGGRENSSGK----------PAEQSGKPPSEPPKQDYIHVR 134
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVK 191
ARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q +
Sbjct: 135 ARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAE 194
Query: 192 VLSM------SRVGAPGAVAP--------LVTTDLPLSS 216
LSM SR+ + V P TTD+P +S
Sbjct: 195 FLSMKLEAVNSRMESGIEVFPPKDFDQQTFDTTDMPFAS 233
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+++++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 187 VRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 246
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 247 VEFLSM 252
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+P+ RA RG ATDP S+ R RRERI ER+R LQ+LVP+ K D + ML+E V YVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 294 LQIKLLS 300
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 113/219 (51%), Gaps = 26/219 (11%)
Query: 3 NNPNEASSTDDFLEQILGIPNFGSAESGLAASDGGLAAGSPMMLQLS--SGDGS--SHIS 58
N+ N + + L Q +G+ A + AA D + G + QLS S GS S IS
Sbjct: 160 NHLNMDNGYESMLRQGMGVGFRNGATNAAAAVDSSGSGGGRLKGQLSFSSRQGSLMSQIS 219
Query: 59 ALG----GGVS----SGYHGQV--FPLGLSLEQGKGGFLKPEEASGSGK-RFPEEHAIKN 107
+G GG S G G + +P+ E+ L E SG + R E A
Sbjct: 220 EMGSEDLGGSSPEGAGGSRGYIPGYPMSSGWEESS---LMSENMSGMKRPRDSSEPAQNG 276
Query: 108 VFHGQPLP--SPVPAA-----PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRAL 160
+ H LP S AA A+ ++RA+RG AT P SIAER+RR RI+ERIR L
Sbjct: 277 LAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKL 336
Query: 161 QELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
QELVP+++K T+ A MLD VDY+K L+ QVKV++ SR
Sbjct: 337 QELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRA 375
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+P+ RA RG ATDP S+ R RRERI ER+R LQ+LVP+ K D + ML+E V YVKFL+
Sbjct: 234 KPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQ 293
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 294 LQIKLLS 300
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRAR+GQAT+ HS+AERLRRE+I+ER++ LQ+LVP K T +A MLDEI++YV+ L+ Q
Sbjct: 174 VRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQ 233
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 234 VEFLSM 239
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 119 PAAPHPPAMRPR-----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DR 172
PA PA + + VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +
Sbjct: 125 PAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 184
Query: 173 AAMLDEIVDYVKFLRLQVKVLSM 195
A +LDEI++Y++ L+ QV+ LSM
Sbjct: 185 ALVLDEIINYIQSLQRQVEFLSM 207
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 517
Query: 193 LSMSR------VGAPGAVAPLVT 209
+SM + PGA+AP+ T
Sbjct: 518 MSMGAGLFMPPMMFPGAMAPMNT 540
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I +R++ LQELVP NK A+ LDEI+++V+FL+ Q
Sbjct: 182 VRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQFLQRQ 241
Query: 190 VKVLSM 195
V++LSM
Sbjct: 242 VEILSM 247
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 119 PAAPHPPAMRPR-----VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DR 172
PA PA + + VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +
Sbjct: 140 PAEESKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 199
Query: 173 AAMLDEIVDYVKFLRLQVKVLSM 195
A +LDEI++Y++ L+ QV+ LSM
Sbjct: 200 ALVLDEIINYIQSLQRQVEFLSM 222
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAML 176
V A PP VRARRGQATD HS+AER+RRE+I ER++ LQ+LVP +K T +A ML
Sbjct: 243 VAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVML 302
Query: 177 DEIVDYVKFLRLQVKV 192
DEI++YV+ L+ QV+V
Sbjct: 303 DEIINYVQSLQRQVEV 318
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER RRE+I+E++ ALQ+++P NK +A +LDEI+
Sbjct: 145 PEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEII 204
Query: 181 DYVKFLRLQVKVLSM 195
+Y++ L+ QV+ LSM
Sbjct: 205 NYIQSLQRQVEFLSM 219
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQATD HS+AER RRE+I+E++ ALQ+++P NK +A +LDEI+
Sbjct: 144 PEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEII 203
Query: 181 DYVKFLRLQVKVLSM 195
+Y++ L+ QV+ LSM
Sbjct: 204 NYIQSLQRQVEFLSM 218
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 116 SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAA 174
S PA+ P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A
Sbjct: 131 SAKPASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 190
Query: 175 MLDEIVDYVKFLRLQVKVLSM 195
+LDEI++Y++ L+ QV+ LSM
Sbjct: 191 VLDEIINYIQSLQRQVEFLSM 211
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 138 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 197
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 198 VEFLSM 203
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 153 VRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 212
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 213 VEFLSMKLTAA 223
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 90 EEASGSGKRFPEEHAIKNVFHGQPLP-SPVPAAPHPPAMRPR-----VRARRGQATDPHS 143
+E G GKR + K G+ P + PP+ P+ VRARRGQATD HS
Sbjct: 83 DEGCGDGKRVKTSESGKG--EGESCSGKPAKQSGKPPSEPPKQDYIHVRARRGQATDSHS 140
Query: 144 IAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPG 202
+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 141 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 200
Query: 203 AVAP 206
+AP
Sbjct: 201 RIAP 204
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+P+ +A P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 62 GKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKV 121
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A +LDEI++Y++ L+ QV+ LSM
Sbjct: 122 IGKALVLDEIINYIQSLQRQVEFLSM 147
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 122 PHPPAMRP-RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 179
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI
Sbjct: 118 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEI 177
Query: 180 VDYVKFLRLQVKVLSM 195
++Y++ L+ QV+ LSM
Sbjct: 178 INYIQSLQHQVEFLSM 193
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 147 VRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 206
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 207 VEFLSM 212
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 146 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 205
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 206 VEFLSM 211
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 121 APHPPAMRPRV--RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
AP PA+ RAR+G A DP SIA R RRERI++R++ LQELVP+ K D ML++
Sbjct: 346 APRVPALNTNFKPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEK 405
Query: 179 IVDYVKFLRLQVKVLSMSRVGAPGAV 204
++YVKFL+LQVKVL+ GA
Sbjct: 406 AINYVKFLQLQVKVLTSDDYWPSGAT 431
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 140 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 199
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 200 VEFLSM 205
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+ER++ LQ LVP NK +A MLDEI++YV+ L+ Q
Sbjct: 6 VRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQ 65
Query: 190 VKVLSMSRVGAPGAVAPLVTTD 211
V+ LSM +V A + D
Sbjct: 66 VEFLSM-KVAALNHRVDFINVD 86
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 299 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQE 358
Query: 189 QVKVLSMSRVGA 200
QVKV++ SR
Sbjct: 359 QVKVINESRANC 370
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 15/119 (12%)
Query: 81 QGKGGFLKPEE---ASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQ 137
Q + G LK E S +G + PE+ A +P S P P VRARRGQ
Sbjct: 58 QDQNGALKAGEVDATSVAGNKLPEQTA-------KPSSSEQP----PKQDYIHVRARRGQ 106
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 195
ATD HS+AER RRE+I+ER++ LQ++VP NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSM 165
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ++VP NK T +A +LDEI++Y++ L+ Q
Sbjct: 141 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER+ LQ+LVP NK +A++LDEI++Y++ L+ Q
Sbjct: 131 VRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 190
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 191 VEFLSM 196
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI++Y++ L+ Q
Sbjct: 134 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 193
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 194 VEFLSM 199
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+
Sbjct: 105 HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQR 164
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 165 QVEFLSM 171
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+ S A + + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K
Sbjct: 245 GEDSSSKEDDASKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV 304
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLS 194
D + ML+E V YVKFL+LQ+K+LS
Sbjct: 305 DISTMLEEAVHYVKFLQLQIKLLS 328
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 10/93 (10%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAM 175
P P P + VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +
Sbjct: 35 PTPEQPKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 92
Query: 176 LDEIVDYVKFLRLQVKVLSM------SRVGAPG 202
LDEI++Y++ L+ QV+ LSM SR+G PG
Sbjct: 93 LDEIINYIQSLQRQVEFLSMKLEAVNSRIG-PG 124
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RR +I ER++ LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGV 225
V+ LSM A TD + S++ ++ E V
Sbjct: 207 VEFLSMKLTAASSYYDFNSETD-AVESMQAKAREAV 241
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 122 PHPPAM-RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
P PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 6 PEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 65
Query: 180 VDYVKFLRLQVKVLSMS 196
++YV+ L+ QV+ LSM
Sbjct: 66 INYVQSLQRQVEFLSMK 82
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RR +I ER++ LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 190 VKVLSMSRVGAPGAVAPLVTTD 211
V+ LSM A TD
Sbjct: 207 VEFLSMKLTAASSYYDFNSETD 228
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI++Y++ L+ Q
Sbjct: 95 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 154
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 155 VEFLSM 160
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 206 VEFLSM 211
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQ+++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 354
Query: 193 LSMSRVGAPGAVAPLVTTDLP 213
+ M AP + P V LP
Sbjct: 355 MWMGSGMAPPVMFPGVHQYLP 375
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP ++ T +A +LDEI++YV+ L+ Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQ 204
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 205 VEFLSM 210
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 185 VEFLSM 190
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQ+++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 373
Query: 193 LSMSRVGAPGAVAPLVTTDLP 213
+ M AP + P V LP
Sbjct: 374 MWMGSGMAPPVMFPGVHQYLP 394
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP++ K T+ A MLD VDY+K L+
Sbjct: 318 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 377
Query: 189 QVKVLSMSR 197
QVKVL+ SR
Sbjct: 378 QVKVLNDSR 386
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 16/119 (13%)
Query: 83 KGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPH 142
+ G + + +SG GKR A+K++ P V VRARRGQATD H
Sbjct: 114 ESGLKRGKNSSGRGKR-----AMKSIEKEDEKPREVV----------HVRARRGQATDSH 158
Query: 143 SIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRVGA 200
S+AER+RR +I ER+R LQ++VP KT A MLDEI++YV+ L+ QV+ LSM A
Sbjct: 159 SLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAA 217
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQ+++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQM 373
Query: 193 LSMSRVGAPGAVAPLVTTDLP 213
+ M AP + P V LP
Sbjct: 374 MWMGSGMAPPVMFPGVHQYLP 394
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 185 VEFLSM 190
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Query: 115 PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRA 173
PS P+ P P VR+RRGQATD HS+AER RRERI ER++ LQ+LVP NK +A
Sbjct: 128 PSSKPSEP-PMQDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKA 186
Query: 174 AMLDEIVDYVKFLRLQVKVLSM------SRVGAPGAVAPLVTTDL 212
LDEI++Y++ L+ QV+ LSM SR+ A+ L DL
Sbjct: 187 LALDEIINYIQSLQCQVEFLSMKLEAVNSRMSTSPAIEGLHPKDL 231
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLD 177
PA P P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LD
Sbjct: 133 PAEP-PKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 191
Query: 178 EIVDYVKFLRLQVKVLSM 195
EI++Y++ L+ QV+ LSM
Sbjct: 192 EIINYIQSLQRQVEFLSM 209
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 13/105 (12%)
Query: 95 SGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIA 154
SGK PE AI+ Q VP ++RA+RG AT P SIAER+RR +I+
Sbjct: 303 SGKTSPEMAAIEKFLQFQ---DAVPC---------KIRAKRGCATHPRSIAERVRRTKIS 350
Query: 155 ERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
ERIR LQELVP++ K T+ + MLD VDY+K L++QVKV++ R
Sbjct: 351 ERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMNDGRA 395
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RR +I ER++ LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 136 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 195
Query: 190 VKVLSMSRVGAPGAVAPLVTTD 211
V+ LSM A TD
Sbjct: 196 VEFLSMKLTAASSYYDFNSETD 217
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 137 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 196
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 197 VEFLSM 202
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQV++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 388
Query: 193 LSMSRVGA---PGAVAPLVTTDLPLSSV 217
+ M G P + P V LP V
Sbjct: 389 MWMGSAGIAAPPAVMFPGVHQYLPRMGV 416
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQV++
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 388
Query: 193 LSMSRVGA---PGAVAPLVTTDLPLSSV 217
+ M G P + P V LP V
Sbjct: 389 MWMGSAGIAAPPAVMFPGVHQYLPRMGV 416
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER+ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 84 VRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQ 143
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 144 VEFLSM 149
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQV++
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQVQM 383
Query: 193 LSM-SRVGAPGAV 204
+ M S + AP AV
Sbjct: 384 MWMGSGIAAPPAV 396
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 138 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 197
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 198 VEFLSM 203
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 190 VEFLSM 195
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP++ K T+ A MLD VDY+K L+
Sbjct: 317 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 376
Query: 189 QVKVLSMSR 197
QVKVL+ SR
Sbjct: 377 QVKVLNDSR 385
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 9/90 (10%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAM 175
P P P + VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +
Sbjct: 159 PTPEQPKQDYIH--VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 216
Query: 176 LDEIVDYVKFLRLQVKVLSM------SRVG 199
LDEI++Y++ L+ QV+ LSM SR+G
Sbjct: 217 LDEIINYIQSLQRQVEFLSMKLEAVNSRIG 246
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V+YVKFL+LQ
Sbjct: 263 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQ 322
Query: 190 VKVLS 194
+K+LS
Sbjct: 323 IKLLS 327
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP++ K T+ A MLD VDY+K L+
Sbjct: 296 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 355
Query: 189 QVKVLSMSR 197
QVKVL+ SR
Sbjct: 356 QVKVLNDSR 364
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA+RGQAT+ HS+AERLRR++I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 31 IRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 90
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 91 VEFLSM 96
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 121 APHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 179
A PP VRARRGQATD HS+AER+RRE+I++R+ LQ LVP +K T +A +LDEI
Sbjct: 128 AEDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEI 187
Query: 180 VDYVKFLRLQVKVLSM 195
++YV+ L+ QV+ LSM
Sbjct: 188 INYVQSLQNQVEFLSM 203
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP NK T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 196 VEFLSM 201
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ + RA RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V+YVKFL+
Sbjct: 256 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 315
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 316 LQIKLLS 322
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I E++R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 140 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 199
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE 232
++ LSM A +T +S E E+ E ++ A+E
Sbjct: 200 IEFLSMKLSAA--------STFYDFNSSEAEALETMQGTNAYE 234
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K A MLD I+DYV+ L+ Q
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM ++ A A L + D+
Sbjct: 164 IEFLSM-KLSAASACYDLNSLDI 185
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD H +AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 151 VRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 211 VEFLSM 216
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I R++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
V+ LSM A+ P DL L V
Sbjct: 214 VEFLSMK----LSAIRPGFNRDLELQDV 237
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A ML+EI++YV+ L+ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQ 65
Query: 190 VKVLSM 195
++ LSM
Sbjct: 66 IEFLSM 71
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RR +I ER++ LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 149 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 208
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 209 VEFLSMKLTAA 219
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K A MLD I+DYV+ L+ Q
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM ++ A A L + D+
Sbjct: 164 IEFLSM-KLSAASACYDLNSLDI 185
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ++VP NK +A++LDEI++Y++ L+ Q
Sbjct: 50 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 109
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 110 VEFLSM 115
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 426
Query: 193 LSM 195
+SM
Sbjct: 427 MSM 429
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I ER++ LQ+LVP NK +A++LDEI++YV+ L Q
Sbjct: 114 VRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQ 173
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 174 VEFLSM 179
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ++VP NK +A +LDEI++Y++ L+ Q
Sbjct: 137 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQ 196
Query: 190 VKVLSMSRVGAPGAVAPLV 208
V+ LSM +AP +
Sbjct: 197 VEFLSMKLEAVNSRLAPRI 215
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ + RA RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V+YVKFL+
Sbjct: 252 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 311
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 312 LQIKLLS 318
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I E++R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 123 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 182
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE 232
++ LSM A +T +S E E+ E ++ A+E
Sbjct: 183 IEFLSMKLSAA--------STFYDFNSSEAEALETMQGTNAYE 217
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 26/131 (19%)
Query: 76 GLSLEQGKGGFLKPEEASGSGKRFP-----EEHAIKNVFHGQPLPSPVPAAPHPPAMRPR 130
G+S Q + +SG GKR EE + + V H
Sbjct: 108 GISTPQVSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVH-------------------- 147
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R L+++VP KT A MLDEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 207
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 208 VEFLSMKLAAA 218
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 151 VEFLSM 156
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ++VP NK +A++LDEI++Y++ L+ Q
Sbjct: 123 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 182
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 183 VEFLSM 188
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I E++R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 119 VRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 178
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWE 232
++ LSM A +T +S E E+ E ++ A+E
Sbjct: 179 IEFLSMKLSAA--------STFYDFNSSEAEALETMQGTNAYE 213
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 13/103 (12%)
Query: 97 KRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAER 156
K FP+ I+ H Q VP ++RA+RG AT P SIAER+RR RI+ER
Sbjct: 311 KNFPQITTIEKFLHFQ---DSVPC---------KIRAKRGCATHPRSIAERVRRTRISER 358
Query: 157 IRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRV 198
+R LQEL P+++K T+ A MLD V+Y+K L+ QVK L+ ++V
Sbjct: 359 MRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLNDTKV 401
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E VDYVKFL+
Sbjct: 187 KIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQR 246
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 247 QIQELT 252
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ + RA RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V+YVKFL+
Sbjct: 251 KDKARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQ 310
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 311 LQIKLLS 317
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 453 SKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 512
Query: 193 LSM 195
+SM
Sbjct: 513 MSM 515
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 218 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 277
Query: 189 QVKVLSMSR 197
QVK LS +R
Sbjct: 278 QVKTLSDNR 286
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 16/109 (14%)
Query: 107 NVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPS 166
N FH P+ R RA+RG AT P SIAER+RR +I+ER++ LQ+LVPS
Sbjct: 374 NTFHTVPM---------------RTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPS 418
Query: 167 VNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPL 214
++K T+ + MLDE V+YVK L+ QV+ LS + V A A + +D +
Sbjct: 419 MDKQTNTSDMLDETVEYVKSLQRQVQELSDTVVRLEAAAAQKIFSDFQI 467
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 25/151 (16%)
Query: 114 LPSPVPAAPHPPAMRPRV--RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-T 170
L + V P + + + R+RRGQAT+ HS+AER+RRE+I+ER++ LQ+LVP NK T
Sbjct: 93 LTNSVKDEPKNKSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVT 152
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
+A +L+ I++YV+ L+ QV++LS+ +V DL ++ P+
Sbjct: 153 GKALVLENIINYVQSLQSQVEILSVKLT----SVLSRCHFDLQING-----------HPS 197
Query: 231 WEKWSNDGTERQVAKLMEENVGAAMQFLQSK 261
E WSN + E+ G+ M + Q K
Sbjct: 198 KEHWSN-------VRETEDFHGSLMHYKQHK 221
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP SI R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 206 KTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 265
Query: 190 VKVLS 194
+K+LS
Sbjct: 266 IKLLS 270
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 520
Query: 193 LSM 195
+SM
Sbjct: 521 MSM 523
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 263 KTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ 322
Query: 190 VKVLS 194
+K+LS
Sbjct: 323 IKLLS 327
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 52 DGSSHISALGG--GVSSGY-HGQVFPLGLSLEQGKGGFLKPEEASGSGKRFPEEHAIKNV 108
DGSS G G+ +G+ G + G + Q F P+ + + F + A
Sbjct: 160 DGSSFKGGDGSMQGLFNGFGAGSMNGTGQASNQSMQHFNHPQGGAMQAQNFGAQGAATTA 219
Query: 109 FHGQPLPSP----VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
QP S PA P R RVRARRGQATDPHSIAERLRRERIAER++ALQELV
Sbjct: 220 VMNQPQASGSNGGAPAQP-----RQRVRARRGQATDPHSIAERLRRERIAERMKALQELV 274
Query: 165 PSVNKT 170
P+ NK
Sbjct: 275 PNANKV 280
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 216
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 217 VEFLSMKLTAA 227
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 112 QPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT- 170
Q P P + P VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK
Sbjct: 80 QQTPKPSSSEQAPKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVI 139
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSM 195
+A +LD I++YV+ L+ QV+ LSM
Sbjct: 140 GKAFVLDGIINYVQSLQRQVEFLSM 164
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 490
Query: 193 LSM 195
+SM
Sbjct: 491 MSM 493
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 381
Query: 193 LSM 195
+SM
Sbjct: 382 MSM 384
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 74 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 133
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 134 VEFLSM 139
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+ + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL
Sbjct: 262 LNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFL 321
Query: 187 RLQVKVLS 194
+LQ+K+LS
Sbjct: 322 QLQIKLLS 329
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 31/139 (22%)
Query: 76 GLSLEQGKGGFLKPEEASG-SGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAM-RPRVRA 133
G ++E G GG LK EAS +G +E + K P+ PP VRA
Sbjct: 79 GSTVENGGGGGLKAAEASSVAGSNNSDEQSTK------------PSESEPPKQDYIHVRA 126
Query: 134 RRGQATDPHSIAERL----------------RRERIAERIRALQELVPSVNK-TDRAAML 176
RRGQATD HSIAER+ RRE+I+ER++ LQ+LVP NK +A +L
Sbjct: 127 RRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVPGCNKMIGKALVL 186
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DEI++Y++ L+ QV+ LSM
Sbjct: 187 DEIINYIQSLQHQVEFLSM 205
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P + + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 184 KFLRLQVKVLSMSRVGAPGAVA----PLVTTDLPLSSVE 218
KFL+LQ+K+LS + +A + DL +SS++
Sbjct: 240 KFLQLQIKLLSSDDMWMYAPIAYNGVNISNIDLNISSLQ 278
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 156 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 215
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 216 VEFLSMKLTAA 226
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 25/160 (15%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A PP VRAR+GQATD HS+ ER+RRE+I+ER++ LQ LVP NK T +A MLDE
Sbjct: 121 ANSKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDE 180
Query: 179 IVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDG 238
I++YV+ L+ QV+V + G P G R P K+
Sbjct: 181 IINYVQSLQRQVEVARKAAKTTGGVKKP----------------NGYR--PRIHKYQK-S 221
Query: 239 TERQVAKL----MEENVGAAMQFLQSKALCIMPISLATAI 274
TE + KL + +N A +F QS+A+ +P L A+
Sbjct: 222 TELLIRKLPFQRLSQNFKADFRF-QSQAVLALPRQLKHAL 260
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 321 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 380
Query: 189 QVKVLSMSRVGA 200
QVK L+ SR
Sbjct: 381 QVKGLNDSRANC 392
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 57/74 (77%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RP RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K L+
Sbjct: 239 RPASNKRRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQ 298
Query: 188 LQVKVLSMSRVGAP 201
+QV+++ MS AP
Sbjct: 299 MQVQIMWMSTGMAP 312
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V+YVKFL+LQ
Sbjct: 260 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQ 319
Query: 190 VKVLS 194
+K+LS
Sbjct: 320 IKLLS 324
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 57/72 (79%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE ++Y+K L++QV++
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 321
Query: 193 LSMSRVGAPGAV 204
+ M AP AV
Sbjct: 322 MWMGSGMAPPAV 333
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 5/85 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRA+RGQAT+ HS+AER RRE+I R++ LQ+LVP NK T +A MLDEI++YV+ L+ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPL 214
V+ LSM A+ P DL L
Sbjct: 214 VEFLSMK----LSAIRPGFNRDLEL 234
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
Query: 190 VKVLS 194
+K+LS
Sbjct: 296 IKLLS 300
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 517
Query: 193 LSM 195
+SM
Sbjct: 518 MSM 520
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
Query: 190 VKVLS 194
+K+LS
Sbjct: 296 IKLLS 300
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P + + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YV
Sbjct: 180 PSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYV 239
Query: 184 KFLRLQVKVLSMSRVGAPGAVA----PLVTTDLPLSSVE 218
KFL+LQ+K+LS +A + DL +SS++
Sbjct: 240 KFLQLQIKLLSSDDTWMYAPIAYNGVNISNIDLNISSLQ 278
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP ++K T+ A MLD V+Y
Sbjct: 287 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEY 346
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLVTTD 211
+K L+ Q K LS R P T+
Sbjct: 347 IKDLQKQFKTLSEKRANCKCISMPKADTN 375
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 13/108 (12%)
Query: 97 KRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAER 156
K FP+ I+ H Q VP ++RA+RG AT P SIAER+RR RI+ER
Sbjct: 149 KNFPQITTIEKFLHFQ---DSVPC---------KIRAKRGCATHPRSIAERVRRTRISER 196
Query: 157 IRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGA 203
+R LQEL P+++K T+ A MLD V+Y+K L+ QVK L+ ++V +
Sbjct: 197 MRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLNDTKVKCTCS 244
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 502
Query: 193 LSM 195
+SM
Sbjct: 503 MSM 505
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP++ K T+ A MLD VDY+K L+
Sbjct: 324 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 383
Query: 189 QVKVLSMSRV 198
QVKVL+ R
Sbjct: 384 QVKVLNDGRA 393
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+ + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL
Sbjct: 259 LNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFL 318
Query: 187 RLQVKVLS 194
+LQ+K+LS
Sbjct: 319 QLQIKLLS 326
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRL 188
+RAR GQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K +A MLDEI++YV+ L+
Sbjct: 262 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 321
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 317 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 376
Query: 189 QVKVLSMSRVGA 200
QVK L+ SR
Sbjct: 377 QVKGLNDSRANC 388
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 15/119 (12%)
Query: 81 QGKGGFLKPEE---ASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQ 137
Q + G LK E S +G + PE+ A +P S P P VRARRGQ
Sbjct: 58 QDQNGALKAGEVDATSVAGNKLPEQTA-------KPSSSEQP----PKQDYIHVRARRGQ 106
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSM 195
ATD HS+AER RRE+I+ER++ LQ++VP NK +A +LDEI++Y++ L+ QV+ L M
Sbjct: 107 ATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFM 165
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324
Query: 190 VKVLS 194
+K+LS
Sbjct: 325 IKLLS 329
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRL 188
+RAR GQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K +A MLDEI++YV+ L+
Sbjct: 262 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 321
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 322 QVEFLSM 328
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+VRA+RG AT P SIAER+RR +I+ERIR LQELVP ++K T+ + MLD VDY+K L+
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 189 QVKVLSMSRV 198
QVK L+ SR
Sbjct: 356 QVKALNESRA 365
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+VRA+RG AT P SIAER+RR +I+ERIR LQELVP ++K T+ + MLD VDY+K L+
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 189 QVKVLSMSRV 198
QVK L+ SR
Sbjct: 356 QVKALNESRA 365
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVKFL+
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 242 QIQELT 247
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRL 188
+RAR GQAT+ HS+AER+RRE+I+ER++ LQ+LVP +K +A MLDEI++YV+ L+
Sbjct: 264 HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQR 323
Query: 189 QVKVLSM 195
QV+ LSM
Sbjct: 324 QVEFLSM 330
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER+ LQ+LVP +K T +A +L+EI++YV+ L+ Q
Sbjct: 119 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 178
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 179 VEFLSM 184
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRE+I ER++ LQ+LVP K A MLD I+DYV+ L+ Q
Sbjct: 47 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 106
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM ++ A A L + D+
Sbjct: 107 IEFLSM-KLSAASACYDLNSLDI 128
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQM 510
Query: 193 LSM 195
+SM
Sbjct: 511 MSM 513
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 22/108 (20%)
Query: 90 EEASGSGKRFPEEHA-IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERL 148
E +SG G + EE + +K+ H VRARRGQATD HS+AER
Sbjct: 118 ETSSGGGSKETEEKSPLKDYIH--------------------VRARRGQATDRHSLAERA 157
Query: 149 RRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 195
RRE+I+ER++ LQ+L+P NK +A +LDEI++Y++ L+ QV+ LSM
Sbjct: 158 RREKISERMKFLQDLIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSM 205
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
R+RA+RG AT P SIAER+RR RI+ER+R LQ+LVP+++K T+ A MLD VDY+K L+
Sbjct: 281 RIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQK 340
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSS 216
Q K LS +R A V PLS+
Sbjct: 341 QFKTLSDNR-----ANCVCVNMQKPLSN 363
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP+ K D + ML+E V YVKFL
Sbjct: 242 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 301
Query: 187 RLQVKVLS 194
+LQ+K+LS
Sbjct: 302 QLQIKLLS 309
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRL 188
VRARRGQATD HS+AER RRE+I +R++ LQELVP NK A+ LDEI+++V+ L+
Sbjct: 176 HVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSLQC 235
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG 222
QV+ LSM AV P + +L S + ESG
Sbjct: 236 QVEFLSMRL----AAVNPRIDFNLD-SMLSAESG 264
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP++ K T+ A MLD VDY+K L+
Sbjct: 159 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQK 218
Query: 189 QVKVLSMSRV 198
QVKVL+ R
Sbjct: 219 QVKVLNDGRA 228
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 345
Query: 190 VKVLS 194
+K+LS
Sbjct: 346 IKLLS 350
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 345
Query: 190 VKVLS 194
+K+LS
Sbjct: 346 IKLLS 350
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP KT A MLDEI++YV+ L+ Q
Sbjct: 73 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 132
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 133 VEFLSMKLTAA 143
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 68 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 127
Query: 189 QVKVLSMSRVGAPGA 203
QVK L+ SR +
Sbjct: 128 QVKGLNDSRANCTCS 142
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A MLDE V YVKFL+
Sbjct: 80 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQK 139
Query: 189 QVKVLS 194
Q++ LS
Sbjct: 140 QIEELS 145
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR ++ D H+ +ER RR+RI E++RALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 75
Query: 193 LSMSRVGAPGAVAPLVTTDL 212
L M G G +AP+V +L
Sbjct: 76 LVM---GKGGGMAPVVPPEL 92
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP K A MLDEI++YV+ L+ Q
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 205 VEFLSMKLTAA 215
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
V PPA R ++R +A + H+++ER RR+RI E+++ALQEL+P+ NKTD+A+MLD
Sbjct: 4 VDVKKAPPA---RTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLD 60
Query: 178 EIVDYVKFLRLQVKVLS 194
E ++Y+K L+LQ++VLS
Sbjct: 61 EAIEYLKMLQLQLQVLS 77
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+VRA+RG AT P SIAER+RR +I+ERIR LQELVP ++K T+ + MLD VDY+K L+
Sbjct: 193 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 252
Query: 189 QVKVLSMSRVGA 200
QVK L+ SR
Sbjct: 253 QVKALNESRASC 264
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQM 523
Query: 193 LSM 195
+SM
Sbjct: 524 MSM 526
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR ++ D H+ +ER RR+RI E++RALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 74
Query: 193 LSMSRVGAPGAVAPLVTTDL 212
L M G G +AP+V +L
Sbjct: 75 LVM---GKGGGMAPVVPPEL 91
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L++QV++
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 370
Query: 193 LSM 195
+ M
Sbjct: 371 MWM 373
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V+YVKFL+ Q
Sbjct: 273 KTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQ 332
Query: 190 VKVLSMSRVGAPGAVAPLVTTD 211
+KV ++ G + L+++D
Sbjct: 333 IKVCTI------GDIIYLLSSD 348
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ + RA RG +TDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V YVKFL+
Sbjct: 212 KGKARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTKVDMSTMLEEAVHYVKFLQ 271
Query: 188 LQVKVLS 194
LQ+KVLS
Sbjct: 272 LQIKVLS 278
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A MLDE + YVKFL+
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 229 QIQELT 234
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 291 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 350
Query: 189 QVKVLSMSR 197
QVKVL S+
Sbjct: 351 QVKVLKESQ 359
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 270 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 329
Query: 189 QVKVLSMSRVGA 200
Q K LS +R
Sbjct: 330 QYKTLSDNRANC 341
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP K+ A MLDEI++YV+ L+ Q
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQ 207
Query: 190 VKVLSMSRVGA 200
V++LSM A
Sbjct: 208 VELLSMKLTAA 218
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Query: 121 APHPPAMRPRV--RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
AP PA+ RAR+G A DP SIA R RRERI++R++ LQELVP+ K D ML++
Sbjct: 346 APRVPALNTNFKPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVDLVTMLEK 405
Query: 179 IVDYVKFLRLQVKV 192
++YVKFL+LQVKV
Sbjct: 406 AINYVKFLQLQVKV 419
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
V PPA R ++R +A + H+++ER RR+RI E+++ALQEL+P+ NKTD+A+MLD
Sbjct: 4 VDVKKAPPA---RTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLD 60
Query: 178 EIVDYVKFLRLQVKVLS 194
E ++Y+K L+LQ++VLS
Sbjct: 61 EAIEYLKMLQLQLQVLS 77
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ+LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 236 KSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQ 295
Query: 190 VKVLS 194
+K+LS
Sbjct: 296 IKLLS 300
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 25/118 (21%)
Query: 88 KPEEASGSGKRFP----EEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHS 143
K + +SG GKR EE K V H VRARRGQATD HS
Sbjct: 129 KIKHSSGRGKRVKSNVTEEEKAKEVVH--------------------VRARRGQATDSHS 168
Query: 144 IAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRVGA 200
+AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ QV+ LS+ A
Sbjct: 169 LAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAA 226
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 25/118 (21%)
Query: 88 KPEEASGSGKRFP----EEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHS 143
K + +SG GKR EE K V H VRARRGQATD HS
Sbjct: 128 KIKHSSGRGKRVKSNVTEEEKAKEVVH--------------------VRARRGQATDSHS 167
Query: 144 IAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSMSRVGA 200
+AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ QV+ LS+ A
Sbjct: 168 LAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAA 225
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+++++ LQ++VP K T +A MLDEI++YV+ L+ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQ 200
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 201 VEFLSM 206
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 5/90 (5%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRAR QAT+ HSIAE+LRRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+ L+ Q
Sbjct: 148 VRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 207
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
V+ LSM V P + D+ L +D
Sbjct: 208 VEFLSMKL----STVNPRLGVDIELLLAKD 233
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 284 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQK 343
Query: 189 QVKVL 193
QVKVL
Sbjct: 344 QVKVL 348
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRL 188
VRA+RGQATD HSIAER+RRE+I ++R LQ++VP +K+ A ML+EI++YV L+
Sbjct: 157 HVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQN 216
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSND 237
QV+ LSM + A L +L SS + + + +KWS +
Sbjct: 217 QVEFLSM-ELAAASCSNDL--KNLTESSKKAQGTNSTDDAQETQKWSRE 262
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA +G ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 223 KTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282
Query: 190 VKVLS 194
+K+LS
Sbjct: 283 IKLLS 287
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 316 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 375
Query: 189 QVKVLSMSRVGA 200
QVK L+ SR
Sbjct: 376 QVKALNESRASC 387
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 183 KSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ 242
Query: 190 VKVLS 194
+K+LS
Sbjct: 243 IKLLS 247
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L++QV++
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQM 91
Query: 193 LSM-SRVGAPGAV 204
+ M + AP AV
Sbjct: 92 MWMGGGMAAPPAV 104
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HSIAER+RRE+I ++R LQ+LVP +K+ A ML+EI++YV L+ Q
Sbjct: 149 VRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQ 208
Query: 190 VKVLSMSRVGAPGA 203
V+ LSM A +
Sbjct: 209 VEFLSMELAAASCS 222
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+VRA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 284 KVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 343
Query: 189 QVKVLSMSRVGA 200
Q K+L+ +R
Sbjct: 344 QYKILNDNRANC 355
>gi|357440797|ref|XP_003590676.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355479724|gb|AES60927.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 325
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 196
Q ++ ++R RR+RIA+ ++AL EL+P+ + +A +LD+I+DYVK+L++QVK LS S
Sbjct: 190 QKSEKTRYSDRQRRQRIADNLKALHELLPTPHVGSQAYILDDIIDYVKYLQIQVKELSGS 249
Query: 197 RVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQ 256
++ A PLV + G ++ Q N+ E + L+E N A Q
Sbjct: 250 KLQADSNSIPLV--------FHEGYGHYIKEQVL-----NEPLEEIMGNLLEVNSAATCQ 296
Query: 257 FLQSKALCIMPISLATAI 274
L++K L ++PI+L +
Sbjct: 297 LLENKGLVLLPIALVDEL 314
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTD-RAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HSIAER+RRE+I R+R LQ+LVP K A MLDEI++YV L+ Q
Sbjct: 202 VRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYVHSLQNQ 261
Query: 190 VKVLS 194
V+ LS
Sbjct: 262 VEFLS 266
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVKFL+
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 189 QVKVLS 194
+++ LS
Sbjct: 164 KIQELS 169
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 92 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 151
Query: 190 VKVLS 194
+K+LS
Sbjct: 152 IKLLS 156
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 29/132 (21%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VR RRGQATD HS+AER RRE+I R++ LQELVP +K AM LDEI+++V+ L+ Q
Sbjct: 200 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 259
Query: 190 VKVLSMSRVGA------------------------PGAVAPLVTTDLPLSSVEDESGEGV 225
V++LSM P V PL+ ++PL+ +
Sbjct: 260 VEILSMKLAAVNPRIDFSLDSLLATDGASLMDNNLPSMVTPLMWPEIPLNGNRQHYQQQW 319
Query: 226 R----NQPAWEK 233
R +QP WE+
Sbjct: 320 RLDAFHQPLWER 331
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I+ R++ LQ LVP ++ T +A ML+EI++YVK L+ Q
Sbjct: 150 VRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 209
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM AV P V T++
Sbjct: 210 IEFLSMK----LAAVDPRVDTNV 228
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQ
Sbjct: 151 RSSSKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 210
Query: 190 VKVLSMSR------VGAPGAVAPLVTTDLPL 214
V++LSM + PGA+ P+ + + +
Sbjct: 211 VQMLSMRNGMSLHPMCLPGALQPVQVSQMRM 241
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 57/69 (82%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+R + ++R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L
Sbjct: 357 IRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSL 416
Query: 187 RLQVKVLSM 195
+LQV+++SM
Sbjct: 417 QLQVQMMSM 425
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVKFL+
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 189 QVKVLS 194
+++ LS
Sbjct: 234 KIQELS 239
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 236 KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 295
Query: 190 VKVLS 194
+K+LS
Sbjct: 296 IKLLS 300
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQE+VP+++K T+ A ML+E V+YVKFL+
Sbjct: 167 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQK 226
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 227 QIQELT 232
>gi|388500044|gb|AFK38088.1| unknown [Medicago truncatula]
Length = 325
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 125 PAMRPRVRAR---RGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P++ P ++R Q ++ ++R R +RIA+ ++AL EL+P+ + +A +LD+I+D
Sbjct: 175 PSLLPNPKSRGSSTKQKSEKTRYSDRQRTQRIADNLKALHELLPTPHVGSQAYILDDIID 234
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTER 241
YVK+L++QVK LS S++ A PLV + G ++ Q N+ E
Sbjct: 235 YVKYLQIQVKELSGSKLQADSNFIPLV--------FHEGYGHYIKEQVL-----NEPLEE 281
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
+ L+E N A Q L++K L ++PI+L +
Sbjct: 282 IMGNLLEVNSAATCQLLENKGLVLLPIALVDEL 314
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E V YVKFL+LQ+K
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEAVQYVKFLQLQIK 307
Query: 192 VLS 194
+LS
Sbjct: 308 LLS 310
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A MLDE V YVKFL+
Sbjct: 117 KIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQN 176
Query: 189 QVKVLS 194
Q++ LS
Sbjct: 177 QIEELS 182
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 55/64 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R ++ + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398
Query: 193 LSMS 196
+SM+
Sbjct: 399 MSMA 402
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 278 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 337
Query: 189 QVKVLSMSRVGA 200
Q K+L+ +R
Sbjct: 338 QYKILNDNRANC 349
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P ++ ++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD V+Y
Sbjct: 293 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEY 352
Query: 183 VKFLRLQVKVLSMSRV 198
+K L+ Q K LS R
Sbjct: 353 IKDLQKQFKTLSEKRA 368
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 299 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 358
Query: 189 QVKVLSMSRVGA 200
Q K+L+ +R
Sbjct: 359 QYKILNDNRANC 370
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDY 182
+ A + RA RG ATDP S+ R RRERI ER+R LQ LVP+ K D + ML+E Y
Sbjct: 188 YSSAKKTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQY 247
Query: 183 VKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
VKFL+LQ+K+LS + AP+ + +S+V+
Sbjct: 248 VKFLQLQIKLLSSDDM---WMYAPIAYNGINISNVD 280
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ RA RG ATDP S+ R RRERI ER+R LQ+LVP+ K D + ML+E YVKFL+
Sbjct: 187 KAYTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAAQYVKFLQ 246
Query: 188 LQVKVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
LQ+K+LS AP+ + +S+V+
Sbjct: 247 LQIKLLSSDDT---WMYAPIAYNGINISNVD 274
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 278 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 337
Query: 189 QVKVLSMSRVGA 200
Q K+L+ +R
Sbjct: 338 QYKILNDNRANC 349
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 217 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 276
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 277 WMTTGMAP 284
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 55/64 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R ++ + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 396
Query: 193 LSMS 196
+SM+
Sbjct: 397 MSMA 400
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 317 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 376
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 377 WMTTGMAP 384
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 333 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 392
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 393 WMTTGMAP 400
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P+ RP + RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K
Sbjct: 217 PSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 275
Query: 185 FLRLQVKVLSMS 196
L++QV+++ M+
Sbjct: 276 SLQMQVQIMWMT 287
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 228 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIM 287
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 288 WMTTGMAP 295
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
Query: 122 PHPPAMRP-RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEI 179
P PP VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A++LDEI
Sbjct: 118 PEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEI 177
Query: 180 VDYVKFLRLQVKVL 193
++Y++ L+ QV+ +
Sbjct: 178 INYIQSLQHQVEFM 191
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ + RA RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V YVKFL+
Sbjct: 213 KGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQ 272
Query: 188 LQVKVLS 194
LQ+K+LS
Sbjct: 273 LQIKLLS 279
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 49/73 (67%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P PP + + RA A DP S+ R RRERI ER+R LQ LVP+ K D + ML+E V
Sbjct: 255 PAPPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQ 314
Query: 182 YVKFLRLQVKVLS 194
YVKFL+LQ+K+LS
Sbjct: 315 YVKFLQLQIKLLS 327
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI ER++ALQEL+P NK+D+A+MLDE ++Y+K L+LQ++V
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQV 348
Query: 193 LSM 195
+SM
Sbjct: 349 MSM 351
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 227 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIM 286
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 287 WMTSGMAP 294
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 30 TRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 89
Query: 193 LSM 195
+ M
Sbjct: 90 MWM 92
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERIR LQELVP+++K T A MLD +DY+K L+
Sbjct: 302 KIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQK 361
Query: 189 QVKVLSMSRV 198
Q K LS R
Sbjct: 362 QFKTLSDKRA 371
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P+ RP + RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K
Sbjct: 214 PSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 272
Query: 185 FLRLQVKVLSMS 196
L++QV+++ M+
Sbjct: 273 SLQMQVQIMWMT 284
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 55/69 (79%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+R +R +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE ++Y+K L
Sbjct: 306 LRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKTDKASMLDEAIEYLKTL 365
Query: 187 RLQVKVLSM 195
+LQV+++SM
Sbjct: 366 QLQVQMMSM 374
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 55/67 (82%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 166 PRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 225
Query: 189 QVKVLSM 195
QV++LSM
Sbjct: 226 QVQMLSM 232
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Query: 78 SLEQGKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQ 137
S+EQ ++ P ++ K+ KN G VRA+RGQ
Sbjct: 102 SMEQSTSSYISPTASTNETKK-------KNNLGGSKKGENKEKEGDKAEEVIHVRAKRGQ 154
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQVKVLSMS 196
ATD HSIAER+RRE+I ++R LQ+LVP +++ A ML+EI++YV L+ QV+ LSM
Sbjct: 155 ATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQVEFLSME 214
Query: 197 RVGAPGA 203
A +
Sbjct: 215 LAAASSS 221
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 11/108 (10%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 200 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 259
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPL------SSVEDESGEGVRNQPAW 231
V++LSM AV P + +L S+ D S G Q AW
Sbjct: 260 VEMLSMRL----AAVNPRIDFNLDTILASENGSLMDGSFNGTAMQLAW 303
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I E+++ LQ +VP KT A MLDEI++YV+ L+ Q
Sbjct: 152 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 211
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 212 VEFLSMKLTAA 222
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 55/67 (82%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 166 PRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 225
Query: 189 QVKVLSM 195
QV++LSM
Sbjct: 226 QVQMLSM 232
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 363
Query: 193 LSM 195
+SM
Sbjct: 364 MSM 366
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP K T +A MLDEI++YV+ L+ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 190 VK 191
V+
Sbjct: 61 VE 62
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 439
Query: 193 LSM 195
+SM
Sbjct: 440 MSM 442
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRE+I ER+R LQ LVP+ K D + ML++ + YVKFL+LQ
Sbjct: 197 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQ 256
Query: 190 VKVLS 194
+K+LS
Sbjct: 257 IKLLS 261
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 236
Query: 193 LSM 195
+SM
Sbjct: 237 MSM 239
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 55/68 (80%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI E++RALQEL+P NKTD+A++LDE ++Y+K L++QV+++
Sbjct: 321 RRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIM 380
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 381 WMTSGMAP 388
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRE+I ER+R LQ LVP+ K D + ML++ + YVKFL+LQ
Sbjct: 183 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVDISTMLEDAIHYVKFLQLQ 242
Query: 190 VKVLS 194
+K+LS
Sbjct: 243 IKLLS 247
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P+ RP + RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K
Sbjct: 218 PSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 276
Query: 185 FLRLQVKVLSMS 196
L++QV+++ M+
Sbjct: 277 SLQMQVQIMWMT 288
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/71 (57%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP K A MLDEI++YV+ L+ Q
Sbjct: 1039 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1098
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 1099 VEFLSMKLTAA 1109
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RAR+G A DP SIA R+RRERI+ER++ LQ L+P+ +K D ML++ + YV+ L LQ+K
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIK 814
Query: 192 VLSMSRVGAPGAVAPLVTT 210
+L + P A+ PL T
Sbjct: 815 MLKNDSIW-PKALGPLPNT 832
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-------TDRAAMLDEIVDY 182
R+RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLDE V+Y
Sbjct: 415 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEY 474
Query: 183 VKFLRLQVKVLSMSRVGAPG 202
+KFL+ QV L R G
Sbjct: 475 MKFLQKQVDDLQECREKCQG 494
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 54/63 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 325
Query: 193 LSM 195
+SM
Sbjct: 326 MSM 328
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE +DY+K L+LQV++
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQM 313
Query: 193 LSM 195
+SM
Sbjct: 314 MSM 316
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 338 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQR 397
Query: 189 QVKVLSMSRVGAPGA 203
QV+ LS +R A
Sbjct: 398 QVETLSENRSKCTCA 412
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+ER++ LQ LVP +K + +LDEI++YVK L+ Q
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQ 167
Query: 190 VKVLSMSRVGAPGAVAPLV 208
V+ L VG +++P++
Sbjct: 168 VEFL----VGKLASISPML 182
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 127 MRPRVRARRG-QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
+R R R +R + H+++ER RR++I E+IRAL+EL+P+ NK D+A+MLD+ +DY+K
Sbjct: 197 VRERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKT 256
Query: 186 LRLQVKVLSMSR 197
L+LQ++++SM R
Sbjct: 257 LKLQLQIMSMGR 268
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 54/64 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398
Query: 193 LSMS 196
+SM+
Sbjct: 399 MSMA 402
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 343 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQR 402
Query: 189 QVKVLSMSRV 198
Q K LS +R
Sbjct: 403 QFKALSENRA 412
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA++G A DP SIA R RRERI++R++ LQEL+P+ +K D ML++ ++YVKFL+LQVK
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVK 468
Query: 192 VL 193
VL
Sbjct: 469 VL 470
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
PP VRARRG+ATD HS+AER+RRE+I+ R++ LQ LVP +K T +A +LDEI+ Y
Sbjct: 154 PPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISY 213
Query: 183 VKFL--RLQVKV 192
V+FL R+QV++
Sbjct: 214 VQFLKDRVQVRI 225
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R ++ + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 188 PRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 247
Query: 189 QVKVLSMSR------VGAPGAVAPL 207
QV++LSM + PG + P+
Sbjct: 248 QVQMLSMRNGLSLQPMCLPGMLQPI 272
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P+ RP + RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K
Sbjct: 393 PSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 451
Query: 185 FLRLQVKVLSMS 196
L++QV+++ M+
Sbjct: 452 SLQMQVQIMWMT 463
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP NK A+ LDEI+++V+ L+ Q
Sbjct: 201 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQ 260
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 261 VEFLSM 266
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA++G A DP SIA R RRERI++R++ LQEL+P+ +K D ML++ ++YVKFL+LQVK
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVDLVTMLEKAINYVKFLQLQVK 468
Query: 192 VL 193
VL
Sbjct: 469 VL 470
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+ER++ LQ LVP +K + +LDEI++YVK L+ Q
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 190 VKVLSMSRVGAPGAVAPLV 208
V+ L VG +++P++
Sbjct: 168 VEFL----VGKLASISPML 182
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+ER++ LQ LVP +K + +LDEI++YVK L+ Q
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 190 VKVLSMSRVGAPGAVAPLV 208
V+ L VG +++P++
Sbjct: 168 VEFL----VGKLASISPML 182
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI ER++ALQEL+P NK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 209 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 268
Query: 193 LSM 195
+SM
Sbjct: 269 MSM 271
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI ER++ALQEL+P NK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 209 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 268
Query: 193 LSM 195
+SM
Sbjct: 269 MSM 271
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ Q
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQ 216
Query: 190 VKVLSMSRVGA 200
V+ LS+ A
Sbjct: 217 VEFLSLKLTAA 227
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 64/97 (65%), Gaps = 6/97 (6%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 153 PRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 212
Query: 189 QVKVLSMSR------VGAPGAVAPLVTTDLPLSSVED 219
QV++LS+ + PG + P + + E+
Sbjct: 213 QVQMLSLRNGIGLHPMCLPGVLQPTQFSQFSMGFAEE 249
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEI 179
AA PA + A+R +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE
Sbjct: 262 AATCSPAQKTTT-AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEA 320
Query: 180 VDYVKFLRLQVKVLSMSRVGAPGAV 204
++Y+K L+LQ++++ M AP AV
Sbjct: 321 IEYLKSLQLQLQMMWMGGGMAPRAV 345
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYV 183
PA VRA+RGQA D HS+AER+RRE+I+E++ LQ LVP +K T +A MLDEI+ YV
Sbjct: 151 PAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYV 210
Query: 184 KFLRLQVKVLSM 195
+ L+ QV+ LSM
Sbjct: 211 QSLQNQVEFLSM 222
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI ER++ALQEL+P NK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339
Query: 193 LSM 195
+SM
Sbjct: 340 MSM 342
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVK L+
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 243 QIQELT 248
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI ER++ALQEL+P NK+D+A+MLDE ++Y+K L+LQ+++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339
Query: 193 LSM 195
+SM
Sbjct: 340 MSM 342
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ Q
Sbjct: 133 VRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 192
Query: 190 VKVLSMSRVGA 200
V+ LSM A
Sbjct: 193 VEFLSMKLTAA 203
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Query: 125 PAMRPRV-RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PA RV +R +A + H+ +ER RR+RI E++RALQEL+P+ NKTD+A+MLDE ++Y+
Sbjct: 582 PATTGRVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYL 641
Query: 184 KFLRLQVKVLSMSRVG 199
K L+LQ++++S+ R G
Sbjct: 642 KMLQLQLQMMSI-RTG 656
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER+R LQ LVP+ K + ML+E V YVKFL+LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQ 295
Query: 190 VKVLS 194
+K+LS
Sbjct: 296 IKLLS 300
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 45/62 (72%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RARRG ATDP S+ R RRE+I ER++ LQ LVP+ K D MLDE + YV+FL+LQV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVT 502
Query: 192 VL 193
+L
Sbjct: 503 LL 504
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
P+ RP + RR +A + H+++ER RR+RI E++RALQELVP NKTD+A++LDE ++Y+K
Sbjct: 317 PSKRPAAK-RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLK 375
Query: 185 FLRLQVKVLSMS 196
L++QV+++ M+
Sbjct: 376 SLQMQVQIMWMT 387
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVK L+
Sbjct: 185 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 244
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 245 QIQELT 250
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 7/89 (7%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRL 188
VR RRGQATD HS+AER RRE+I R++ LQELVP NK A+ LD+I+++V+ L+
Sbjct: 159 HVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQH 218
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
+V++LSM AV P++ D L S+
Sbjct: 219 EVEILSMKL----AAVNPII--DFNLDSI 241
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQEL--VPSVNKTDRAAMLDEIVDYVKFLRLQV 190
ARR +A + H+++ER RR+RI E++RALQEL +P NKTD+A+MLDE ++Y+K L+LQ+
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQL 221
Query: 191 KVLSMSRVGAPGAVAPLVTTDLPLSSVE 218
+V+ M AP + P V LP V
Sbjct: 222 RVMWMGSGMAPPLMFPGVHQYLPRMGVR 249
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI E++RALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 356 TKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 415
Query: 193 LSM 195
+SM
Sbjct: 416 MSM 418
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+ +ER RR+RI E++RALQEL+P+ NKTD+A+MLDE +DY+K L+LQ+++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQM 789
Query: 193 LSM 195
+S+
Sbjct: 790 MSI 792
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
Query: 194 SM 195
SM
Sbjct: 369 SM 370
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 12/115 (10%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 185 VRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQ 244
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG---EGVRNQPAW---EKWSNDG 238
V++LSM AV P + +L S + E+G +G N ++ ++W DG
Sbjct: 245 VEMLSMRL----AAVNPRIDFNLD-SILASENGSLMDGSFNAESYHQLQQWPFDG 294
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 22/176 (12%)
Query: 53 GSSHISALGGGVSSGYHGQVFPLGLSLEQGKG----GFLKPEEASGSGKR--FPEEHAIK 106
GSS + G++ HG P G+ G + E + S KR F E+++
Sbjct: 98 GSSAVVESSTGINFSDHGAYCPAGMKETAGNTFSSIAAVDSEAITVSRKRRMFSMENSVD 157
Query: 107 NVFHGQ---PLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
+ P S VP+ P P ++R +A + H+++E+ RR RI E+++ALQ L
Sbjct: 158 DFGCDSEKGPEASDVPSNPAPSR----SSSKRSRAAEVHNLSEKRRRSRINEKMKALQNL 213
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR------VGAPGAVAPLVTTDLP 213
+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M + PGA+ P T LP
Sbjct: 214 IPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPIYLPGALQP---TQLP 266
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 57/76 (75%), Gaps = 5/76 (6%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR +A + H+++ER RR+RI E++RALQEL+P KTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 182 TRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQV 241
Query: 193 LSMSRVGAPGAVAPLV 208
+ M G +AP++
Sbjct: 242 MWMG-----GGMAPML 252
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K
Sbjct: 33 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLK 92
Query: 185 FLRLQVKVLSMSR---------VGAPGAVAPL 207
L+LQV++LSM GAP +APL
Sbjct: 93 HLQLQVQMLSMRNGLYLPPGNLSGAPETLAPL 124
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 440
Query: 194 SM 195
SM
Sbjct: 441 SM 442
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRG+ATD HS+AER RRE+I+ER++ LQ LVP +K + +LDEI++YVK L+ Q
Sbjct: 42 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 101
Query: 190 VKVLSMSRVGAPGAVAPLV 208
V+ L VG +++P++
Sbjct: 102 VEFL----VGKLASISPML 116
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA+RG ATDP S+ R RRERI ER++ LQ LVP+ K D ML+E + YVKFL+LQV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVN 271
Query: 192 VLS 194
+LS
Sbjct: 272 MLS 274
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K
Sbjct: 33 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLK 92
Query: 185 FLRLQVKVLSMSR---------VGAPGAVAPL 207
L+LQV++LSM GAP +APL
Sbjct: 93 HLQLQVQMLSMRNGLYLPPGNLSGAPETLAPL 124
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 107 NVFHGQPLP-SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
N GQ L S +++ + RA +G ATDP S+ R RRE+I ER++ LQ LVP
Sbjct: 142 NWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 202 NGTKVDISTMLEEAVHYVKFLQLQIKLLS 230
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER+RR +I ER+R LQ++VP K A MLDEI++YV+ L+ Q
Sbjct: 1028 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1087
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 1088 VEFLSM 1093
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 29/132 (21%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VR RRGQATD HS+AER RRE+I R++ LQELVP +K AM LDEI+++V+ L+ Q
Sbjct: 206 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 265
Query: 190 VKVLSMSRVGA------------------------PGAVAPLVTTDLPLSSVEDESGEGV 225
V++LSM P V PL+ ++PL+ +
Sbjct: 266 VEILSMKLAAVNPRIDFSLDSLLATDGASLMDNNLPSMVTPLMWPEIPLNGNRQHYQQQW 325
Query: 226 R----NQPAWEK 233
+ +QP WE+
Sbjct: 326 QLDAFHQPLWER 337
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD VDY+K L+
Sbjct: 29 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQK 88
Query: 189 QVKVLSMSRVGAPG 202
Q K LS +R
Sbjct: 89 QYKTLSDNRANCKC 102
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 461
Query: 194 SM 195
SM
Sbjct: 462 SM 463
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ R+ RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V YVKFL+LQ
Sbjct: 223 KSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282
Query: 190 VKVLS 194
+K+LS
Sbjct: 283 IKLLS 287
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K
Sbjct: 35 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLK 94
Query: 185 FLRLQVKVLSMSR---------VGAPGAVAPL 207
L+LQV++LSM GAP +APL
Sbjct: 95 HLQLQVQMLSMRNGLYLPPGNLSGAPETLAPL 126
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP NK A+ LDEI+ +V+ L+ Q
Sbjct: 197 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQ 256
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V+ LSM AV P + +L
Sbjct: 257 VEFLSMRL----AAVNPRIDFNL 275
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT------DRAAMLDEIVDYVK 184
VRARRGQATD HSIAER+RRE+I R+R LQ+LVP K A MLDEI++YV
Sbjct: 148 VRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDEIINYVH 207
Query: 185 FLRLQVKVLS 194
L+ QV+ LS
Sbjct: 208 SLQNQVEFLS 217
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK--TDRAAMLDEIVDYVKFLR 187
+VRA+RG AT P SIAER+RR RI+ER+R LQELVP+ +K + A MLDE V+YVK L+
Sbjct: 467 KVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQ 526
Query: 188 LQVKVLSMSRVGAPGAVAP 206
QV+ L+ +R P
Sbjct: 527 KQVQELAENRAKCTCTHNP 545
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEI 179
AA PA + A+R +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE
Sbjct: 253 AATCSPAQKTTT-AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEA 311
Query: 180 VDYVKFLRLQVKVLSMSRVGAPGAV 204
++Y+K L+LQ++++ M AP AV
Sbjct: 312 IEYLKSLQLQLQMMWMGGGMAPPAV 336
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 107 NVFHGQPLP-SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
N GQ L S +++ + RA +G ATDP S+ R RRE+I ER++ LQ LVP
Sbjct: 142 NWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVED 219
+ K D + ML+E V YVKFL+LQ+KV + + G L+ T + L S +D
Sbjct: 202 NGTKVDISTMLEEAVHYVKFLQLQIKVCRLLK-GFFVFSQNLIITHVQLLSSDD 254
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEI 179
AA PA + A+R +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE
Sbjct: 253 AATCSPAQKTTT-AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEA 311
Query: 180 VDYVKFLRLQVKVLSMSRVGAPGAV 204
++Y+K L+LQ++++ M AP AV
Sbjct: 312 IEYLKSLQLQLQMMWMGGGMAPPAV 336
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLR 187
VRARRG+ATD HS+AER+RRERI+ER++ L+ LVP NK T +A MLDEI++YV+ L+
Sbjct: 150 VRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 63/90 (70%), Gaps = 9/90 (10%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR---- 197
H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 128 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSL 187
Query: 198 --VGAPGAVAPLVTTDLPLSSVEDESGEGV 225
+ PGA+ P+ LPLS + + G G+
Sbjct: 188 HPMCLPGALQPM---QLPLSGMSFDEGIGL 214
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 259 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 318
Query: 193 LSM 195
+SM
Sbjct: 319 MSM 321
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 496
Query: 194 SM 195
SM
Sbjct: 497 SM 498
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ A MLD VDY+K L+
Sbjct: 332 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 391
Query: 189 QVKVLS 194
QV+ LS
Sbjct: 392 QVQTLS 397
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 107 NVFHGQPLP-SPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVP 165
N GQ L S +++ + RA +G ATDP S+ R RRE+I ER++ LQ LVP
Sbjct: 142 NWIDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVP 201
Query: 166 SVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 202 NGTKVDISTMLEEAVHYVKFLQLQIKLLS 230
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G+ L + V RARRGQATD H++AER+RR +I E++R LQ +VP KT
Sbjct: 131 GKRLKNNVTEEEEKAKEVVNARARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKT 190
Query: 171 -DRAAMLDEIVDYVKFLRLQVKVLSMSRVGA 200
A MLDEI++YV+ L+ QV+ LS+ A
Sbjct: 191 MSMAVMLDEIINYVQSLQHQVEFLSLELTAA 221
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR ++ + H+ +ER RR++I E+++ALQEL+P+ NKTD+ +MLDE +DY+K L+LQ+++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQM 73
Query: 193 LSMSRVGAPGAVAPL 207
L M + +P V PL
Sbjct: 74 LVMGKGMSP--VVPL 86
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 54/69 (78%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+R +R +A + H+++ER RR+RI E+++ALQEL+P NK D+A+MLDE ++Y+K L
Sbjct: 295 VRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTL 354
Query: 187 RLQVKVLSM 195
+LQV+++SM
Sbjct: 355 QLQVQMMSM 363
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 508
Query: 194 SM 195
SM
Sbjct: 509 SM 510
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 54/69 (78%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+R +R +A + H+++ER RR+RI E+++ALQEL+P NK D+A+MLDE ++Y+K L
Sbjct: 291 VRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKASMLDEAIEYLKTL 350
Query: 187 RLQVKVLSM 195
+LQV+++SM
Sbjct: 351 QLQVQMMSM 359
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 11/99 (11%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ERIR LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 287 KIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQK 346
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSS--VEDESGEGV 225
QVK S +G + D L+ V DES E +
Sbjct: 347 QVKNSKASSLG--------IEKDFVLAKGQVTDESIEAI 377
>gi|356502821|ref|XP_003520214.1| PREDICTED: uncharacterized protein LOC100788949 [Glycine max]
Length = 320
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 14/132 (10%)
Query: 144 IAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR-VGAPG 202
+ ER RR+RIA+ ++AL EL+P+ + +A +LD+I+DYVK+L+LQ+K S SR + A
Sbjct: 189 VTERQRRQRIADNLKALHELLPNPAEGSQAYVLDDIIDYVKYLQLQIKEQSGSRLLQADS 248
Query: 203 AVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKA 262
PLV + G + +K N+ E + KL+E++ AA+Q L+SK
Sbjct: 249 TAIPLV--------FHEGYGHYIN-----QKMLNEPLEEIMGKLVEDDSAAAVQLLESKG 295
Query: 263 LCIMPISLATAI 274
L ++P++L +
Sbjct: 296 LFLLPMALVDEL 307
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLD VDY+K L+
Sbjct: 361 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQK 420
Query: 189 QVK 191
QVK
Sbjct: 421 QVK 423
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V YV FL+LQ
Sbjct: 271 KTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYVNFLQLQ 330
Query: 190 VKVLS 194
+K+LS
Sbjct: 331 IKLLS 335
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 62/89 (69%), Gaps = 7/89 (7%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G LPS A P PR ++R +A + H+++E+ RR +I E+++ALQ L+P+ NKT
Sbjct: 71 GSELPSSKAAPP------PRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKT 124
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
D+A+MLDE ++Y+K L+LQV++L M R G
Sbjct: 125 DKASMLDEAIEYLKQLQLQVQML-MVRNG 152
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 12/115 (10%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 184 VRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 243
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG---EGVRNQPAW---EKWSNDG 238
V++LSM AV P V +L S + E+G +G N ++ ++W DG
Sbjct: 244 VEMLSMRL----AAVNPRVEFNLD-SILASENGSLMDGNFNGESYHQLQQWPFDG 293
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVK L+
Sbjct: 180 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQS 239
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 240 QIQELT 245
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE ++Y+K L+LQV++
Sbjct: 272 TKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM 331
Query: 193 LSM 195
+SM
Sbjct: 332 MSM 334
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RAR+G A DP SIA R+RRERI+ER++ LQ L+P+ +K D ML++ + YV+ L Q+K
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIK 699
Query: 192 VLSMSRVGAPGAVAPLVTT 210
+L + P A+ PL T
Sbjct: 700 MLKNDSLW-PKALGPLPNT 717
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 263
Query: 190 VKVLSM 195
V++LSM
Sbjct: 264 VEMLSM 269
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ Q
Sbjct: 127 VRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 186
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 187 VEFLSM 192
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 263
Query: 190 VKVLSM 195
V++LSM
Sbjct: 264 VEMLSM 269
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
Query: 122 PHPPAMRPRVRA----RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
PH + RPR +R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLD
Sbjct: 143 PHGTSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLD 202
Query: 178 EIVDYVKFLRLQVKVLSM 195
E ++Y+K L+LQV++LSM
Sbjct: 203 EAIEYLKQLQLQVQMLSM 220
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 51/61 (83%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R +A H+++ER RR+RI E++RALQELVP NKTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASMLDEAIEYLKSLQLQLQV 292
Query: 193 L 193
+
Sbjct: 293 M 293
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ A MLD V+Y+K L+
Sbjct: 339 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQN 398
Query: 189 QVKVLSMSR 197
QV+ LS +R
Sbjct: 399 QVQTLSDNR 407
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVK L+
Sbjct: 177 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQG 236
Query: 189 QVKVLS 194
Q++ L+
Sbjct: 237 QIQELT 242
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE + Y+K L+LQV++
Sbjct: 304 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQM 363
Query: 193 LSM 195
+SM
Sbjct: 364 MSM 366
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ RA RG ATDP S+ R RRERI ER++ LQ +VP+ K D + ML+E V YVKFL+LQ
Sbjct: 269 KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVDISTMLEEAVHYVKFLQLQ 328
Query: 190 VKVLSM 195
+KV ++
Sbjct: 329 IKVKAL 334
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ A MLD VDY+K L+
Sbjct: 329 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 388
Query: 189 QVKVLS 194
QV+ LS
Sbjct: 389 QVQTLS 394
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 53/69 (76%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR ++ D H+ +ER RR+RI E+++ALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 75
Query: 193 LSMSRVGAP 201
L M + AP
Sbjct: 76 LVMGKGMAP 84
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RAR+G A DP SIA R+RRERI+ER++ LQ L+P+ +K D ML++ + YV+ L LQ+K
Sbjct: 49 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAITYVQCLELQIK 108
Query: 192 VLSMSRVGAPGAVAPLVTT 210
+L + P A+ PL T
Sbjct: 109 MLKNDSIW-PKALGPLPNT 126
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+RG+ + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 379
Query: 194 SMSRVGAPGAVAP 206
MS +G G P
Sbjct: 380 -MSTMGTAGMCMP 391
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R ++ + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 188 PRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 247
Query: 189 QVKVLSMSR------VGAPGAVAPL 207
QV++LSM + PG + P+
Sbjct: 248 QVQMLSMRNGLSLQPMCLPGVLQPI 272
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+RG+ + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 379
Query: 194 SMSRVGAPGAVAP 206
MS +G G P
Sbjct: 380 -MSTMGTAGMCMP 391
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+RG+ + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 383
Query: 194 SMSRVGAPGAVAP 206
MS +G G P
Sbjct: 384 -MSTMGTAGMCMP 395
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
PVP+ + RP+ R R + DP S+A R RRERI++RIR LQ LVP K D A+ML
Sbjct: 419 PVPSLEEIASSRPKRRNVR-ISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASML 477
Query: 177 DEIVDYVKFLRLQVKVL 193
DE + YVKFL+LQ++ L
Sbjct: 478 DEAIHYVKFLKLQLQTL 494
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQ
Sbjct: 132 RSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 191
Query: 190 VKVLSMSR------VGAPGAVAPLVTTDLPLSSVE-------DESGEGVRNQPAWE-KWS 235
V++LSM + PG + P+ + + + E D +G NQ E + +
Sbjct: 192 VQMLSMRNGLSLHPMCLPGVLPPVQLSQMRIGIGEENGSLHMDMTGTLPVNQETMEYRLA 251
Query: 236 NDGT 239
N GT
Sbjct: 252 NQGT 255
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 52/62 (83%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 408
Query: 194 SM 195
+M
Sbjct: 409 AM 410
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 12/115 (10%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K + LDEI+++V+ L+ Q
Sbjct: 185 VRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTLQRQ 244
Query: 190 VKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESG---EGVRNQPAW---EKWSNDG 238
V++LSM AV P + +L S + E+G +G N ++ ++W DG
Sbjct: 245 VEMLSMRL----AAVNPRIDFNLD-SILASENGSLMDGSFNAESYHQLQQWPFDG 294
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RAR+G A DP SIA R+RRERI+ER++ LQ L+P+ +K D ML++ + YV+ L Q+K
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVDMVTMLEKAISYVQCLEFQIK 882
Query: 192 VLSMSRVGAPGAVAPLVTT 210
+L + P A+ PL T
Sbjct: 883 MLKNDSLW-PKALGPLPNT 900
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 78.6 bits (192), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+ RARRG AT P SIAER RR RI+ER++ LQ+LVP+++K T+ A MLDE V+YVK L+
Sbjct: 14 KTRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQT 73
Query: 189 QVKVLSMSRV 198
QVK LS + V
Sbjct: 74 QVKDLSETIV 83
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 49/56 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 197
H+++ER RR++I E+IRAL+EL+P+ NK D+A+MLD+ +DY+K L+LQ++++SM R
Sbjct: 213 HNLSERKRRDKINEKIRALKELIPNCNKMDKASMLDDAIDYLKTLKLQLQIMSMGR 268
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 53/66 (80%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R +R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQ
Sbjct: 177 RSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQ 236
Query: 190 VKVLSM 195
V++LSM
Sbjct: 237 VQMLSM 242
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Query: 129 PRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
PR ++R ++ + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+L
Sbjct: 188 PRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQL 247
Query: 189 QVKVLSMSR------VGAPGAVAPL 207
QV++LSM + PG + P+
Sbjct: 248 QVQMLSMRNGLSLQPMCLPGMLQPI 272
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 54/68 (79%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+ +ER RR+RI E+++ALQELVP NK+D+A++LDE ++Y+K L+LQV+++
Sbjct: 140 RRARAAEVHNQSERRRRDRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIM 199
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 200 WMTTGMAP 207
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +AT+ H+++ER RR+RI +++RALQ+L+P+ NK D+A+ML E +DY+K L+LQV++
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQM 430
Query: 193 LSM-SRVGAPGAVAP 206
+SM +R+ P + P
Sbjct: 431 MSMGTRLCMPLMMLP 445
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV++
Sbjct: 158 TKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 217
Query: 193 LSM 195
++M
Sbjct: 218 MAM 220
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD V Y+K L+
Sbjct: 270 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQK 329
Query: 189 QVKVLSMSRVGA 200
Q K LS +R
Sbjct: 330 QYKTLSDNRANC 341
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD V+Y+K L+
Sbjct: 320 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQK 379
Query: 189 QVKVLSMSRV 198
Q L+ +R
Sbjct: 380 QYNTLTDNRA 389
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 51/59 (86%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+RG+A + H+++ER RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+V
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+ + +A +G ATDP S+ R RRERI +R+R LQ LVP+ K D + ML+E V YVKFL
Sbjct: 236 FKGKTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFL 295
Query: 187 RLQVKVLS 194
+LQ K+LS
Sbjct: 296 QLQNKLLS 303
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +AT+ H+++ER RR+RI +++RALQ+L+P+ NK D+A+ML E +DY+K L+LQV++
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQM 436
Query: 193 LSM-SRVGAPGAVAP 206
+SM +R+ P + P
Sbjct: 437 MSMGTRLCMPLMMLP 451
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD V+Y+K L+
Sbjct: 309 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQK 368
Query: 189 QVKVLSMSRV 198
Q L+ +R
Sbjct: 369 QYNTLTDNRA 378
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 54/65 (83%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+P R +R +A + H+++ER RR+RI E++RALQEL+P+ NKTD+A+MLDE ++Y+K L+
Sbjct: 8 KPATRPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQ 67
Query: 188 LQVKV 192
LQ++V
Sbjct: 68 LQLQV 72
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR ++ + H+ +ER RR++I E+++ALQEL+P+ NKTD+ +MLDE +DY+K L+LQ+++
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQM 73
Query: 193 LSMSRVGAPGAVAPL 207
L M + +P V PL
Sbjct: 74 LVMGKGMSP--VVPL 86
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA RG AT+P S+ R RRERI ER+R LQ LVP+ K D + ML+E YVKFL+LQ+K
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAAQYVKFLQLQIK 254
Query: 192 VLSM 195
+LS
Sbjct: 255 LLSC 258
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VR RRGQATD HS+AER RRE+I R++ LQELVP NK A+ LD+I+++V+ L+ +
Sbjct: 188 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNE 247
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V++LSM AV P++ +L
Sbjct: 248 VEILSMKL----AAVNPVIDFNL 266
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 17/111 (15%)
Query: 84 GGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHS 143
G LK E+ +G+G ++ ++ + L VP RVRA+RG AT P S
Sbjct: 53 GHQLKEEQGTGAG-------SLLDLDLERMLEDSVPC---------RVRAKRGCATHPRS 96
Query: 144 IAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVL 193
IAER+RR RI++RIR LQELVP+++K T+ A ML+E V+YVK L+ Q++ L
Sbjct: 97 IAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQKQIEEL 147
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
RA+RG ATDP SI R RRERI ER+RALQ LVP+ K D ML+E ++YVKFL+LQ+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKVDIVTMLEEAINYVKFLQLQL 296
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV A +PR + R ++DP ++A RLRRER+++R+R LQ+LV
Sbjct: 251 VKEMIYRAAAMRPVHLGTEAAADKPRRKNVR-ISSDPQTVAARLRRERVSDRLRVLQKLV 309
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
P NK D A+MLDE Y+KFL+ QV+ L
Sbjct: 310 PGGNKMDTASMLDEAASYLKFLKSQVQKL 338
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 316
Query: 193 LSM 195
+SM
Sbjct: 317 MSM 319
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV A +PR + R ++DP ++A RLRRER+++R+R LQ+LV
Sbjct: 250 VKEMIYRAAAMRPVHLGTEAAADKPRRKNVR-ISSDPQTVAARLRRERVSDRLRVLQKLV 308
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
P NK D A+MLDE Y+KFL+ QV+ L
Sbjct: 309 PGGNKMDTASMLDEAASYLKFLKSQVQKL 337
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ A MLD V+Y+K L+
Sbjct: 336 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQN 395
Query: 189 QVKVLSMSRV 198
QV+ LS +R
Sbjct: 396 QVEALSDNRA 405
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRA+RGQATD HS+AER+RRERI E++R LQ+LVP KT A MLD I++YV+ L+ Q
Sbjct: 121 VRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 180
Query: 190 VKV 192
++V
Sbjct: 181 IEV 183
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 73/105 (69%), Gaps = 8/105 (7%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
V+ARRG+A + HS+AER+RRE+I+ER++ LQ+LVP ++ T + +LDEI++YV+ L+ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 190 VKVLSM--SRVGAPGAVAP---LVTTDLPLSS--VEDESGEGVRN 227
V++LSM + VG ++ L+T + LSS V + GE V +
Sbjct: 265 VELLSMKLASVGLESSLEAEQILLTNNSYLSSSNVLCKRGENVND 309
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P AAP PP RPR + R ++DP ++A RLRRER++ER+R LQ LVP +K D A ML
Sbjct: 257 PSFAAPQPP-QRPRRKNVR-ISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATML 314
Query: 177 DEIVDYVKFLRLQVKVL 193
DE Y+KFL+ Q++ L
Sbjct: 315 DEAASYLKFLKSQLEAL 331
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VR RRGQATD HS+AER RRE+I R++ LQELVP K A+ LDEI+++V+ L+ Q
Sbjct: 173 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQ 232
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V++LSM AV P + +L
Sbjct: 233 VEILSMKL----AAVNPRIDFNL 251
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VR RRGQATD HS+AER RRE+I R++ LQELVP NK A+ LD+I+++V+ L+ +
Sbjct: 192 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNE 251
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V++LSM AV P++ +L
Sbjct: 252 VEILSMKL----AAVNPVIDFNL 270
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 52/62 (83%), Gaps = 1/62 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
R+RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ + MLDE V+Y+KFL+
Sbjct: 24 RLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQK 83
Query: 189 QV 190
QV
Sbjct: 84 QV 85
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
VRARRGQAT+ HS+AER RRE+I+ R++ LQ LVP ++ T +A ML+EI++YVK L+ Q
Sbjct: 19 VRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 78
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
++ LSM AV P + T++
Sbjct: 79 IEFLSMK----LAAVDPRLDTNV 97
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 390
Query: 193 LSM 195
+SM
Sbjct: 391 MSM 393
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R + + H+++ER RR+RI E++RALQEL+P+ NK D+++ML+E ++Y+K L+LQV++
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEAIEYLKTLQLQVQM 377
Query: 193 LSM 195
+SM
Sbjct: 378 MSM 380
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQELVP+++K T+ A MLD V+Y+K L+
Sbjct: 195 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQK 254
Query: 189 QVKVLSMSR 197
Q L+ +R
Sbjct: 255 QYNTLTDNR 263
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 58/80 (72%), Gaps = 6/80 (7%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 201
Query: 193 LSMSR------VGAPGAVAP 206
L+M V PG + P
Sbjct: 202 LTMRNGVSLYPVCLPGVLQP 221
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 93 SGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRER 152
+G+ RF +I + S P P + + RA ATD SI R RRER
Sbjct: 162 NGTNNRFSHVDSIGGIISS----SLSPKEHEAPKLGRKSRAASSPATDAQSIYARKRRER 217
Query: 153 IAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
I ER+R LQ LVP+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 218 INERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 259
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 72/105 (68%), Gaps = 8/105 (7%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
V+ARRG+A + HS+AER+RRE+I+ER++ LQ+LVP ++ T + +LDEI++YV+ L+ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 190 VKVLSM--SRVGAPGAVAP---LVTTDLPLSS--VEDESGEGVRN 227
V+ LSM + VG ++ L+T + LSS V + GE V +
Sbjct: 265 VEFLSMKLASVGLESSLEAEQILLTNNSYLSSSNVLCKRGENVND 309
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 59/76 (77%), Gaps = 3/76 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R ++ + HS++E+ RR+RI +++R+LQEL+P+ K D+ ++LDE +DY+K L+LQV+V
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQV 438
Query: 193 LSMSRVGAPGAVAPLV 208
+SM GA +AP++
Sbjct: 439 MSM---GAGMCMAPVM 451
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 390
Query: 193 LSM 195
+SM
Sbjct: 391 MSM 393
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+RG+ + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM- 324
Query: 194 SMSRVGAPGAVAPLVT 209
MS +G A A L
Sbjct: 325 -MSSMGPAAAAAGLCV 339
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQ+L P+++K T+ A MLD V+Y+K L+
Sbjct: 349 KIRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQK 408
Query: 189 QVKVL 193
QVK L
Sbjct: 409 QVKTL 413
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQELVP+++K T+ + MLD V+Y+K L+
Sbjct: 358 KLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQK 417
Query: 189 QVKVLSMSRVGA 200
QV+ LS +R
Sbjct: 418 QVQTLSDNRAKC 429
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQELVP+++K T+ + MLD V+Y+K L+
Sbjct: 358 KLRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQK 417
Query: 189 QVKVLSMSRVGA 200
QV+ LS +R
Sbjct: 418 QVQTLSDNRAKC 429
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Query: 128 RPR--VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
RPR ++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K
Sbjct: 95 RPRGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 154
Query: 186 LRLQVKVLSM 195
L+LQV++LSM
Sbjct: 155 LQLQVQMLSM 164
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
RA+RG ATDP S+ R RRE+I ER++ LQ LVP+ K D MLDE + YVKFL+ QV+
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVE 502
Query: 192 VL 193
+L
Sbjct: 503 LL 504
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 122 PHPPAMRPRVRA-----RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P PP R R + +R +A + H+++E+ RR +I E+++ALQ L+P+ NKTD+A+ML
Sbjct: 85 PEPPPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASML 144
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DE ++Y+K L+LQV++LSM
Sbjct: 145 DEAIEYLKQLQLQVQMLSM 163
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R +A + H+ +ER RR+RI E++RALQEL+P+ NKTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 78
Query: 193 LSM 195
++
Sbjct: 79 CAV 81
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 53/69 (76%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
RR ++ + H+ +ER RR+RI E+++ALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++
Sbjct: 15 TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 74
Query: 193 LSMSRVGAP 201
L M + AP
Sbjct: 75 LVMGKGMAP 83
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 13/78 (16%)
Query: 130 RVRARRGQATDPHSIAERL-------------RRERIAERIRALQELVPSVNKTDRAAML 176
+ RA RG ATDP S+ RL RRERI ER+R LQ LVP+ K D + ML
Sbjct: 236 KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVDISTML 295
Query: 177 DEIVDYVKFLRLQVKVLS 194
+E V YVKFL+LQ+K+LS
Sbjct: 296 EEAVQYVKFLQLQIKLLS 313
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 174
Query: 193 LSM 195
+SM
Sbjct: 175 MSM 177
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 12/95 (12%)
Query: 99 FPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIR 158
F H K+V +P+P P R ++R +A + H+++E+ RR RI E+++
Sbjct: 99 FTSSHVEKSVEASKPVPPP------------RSSSKRSRAAEFHNLSEKRRRSRINEKMK 146
Query: 159 ALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L
Sbjct: 147 ALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQYL 181
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 53/68 (77%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+ +ER RR+RI E++R+LQEL+P NK D+A++LDE ++Y+K L++QV+V+
Sbjct: 203 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 262
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 263 WMTSGMAP 270
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Query: 128 RPR--VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
RPR ++R +A + H+++E+ RR +I E+++ALQ L+P+ NKTD+A+MLDE ++Y+K
Sbjct: 15 RPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 74
Query: 186 LRLQVKVLSM 195
L+LQV++LSM
Sbjct: 75 LQLQVQMLSM 84
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 53/68 (77%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+ +ER RR+RI E++R+LQEL+P NK D+A++LDE ++Y+K L++QV+V+
Sbjct: 194 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQVQVM 253
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 254 WMTSGMAP 261
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 51/69 (73%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
+++ + +A RG A+DP S+ R RRERI +R++ LQ LVP+ K D + ML++ V YVKF
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKF 186
Query: 186 LRLQVKVLS 194
L+LQ+K+LS
Sbjct: 187 LQLQIKLLS 195
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 55/71 (77%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+R +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+MLDE +DY+K L+LQV+
Sbjct: 254 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKASMLDEAIDYLKSLQLQVQR 313
Query: 193 LSMSRVGAPGA 203
+ + ++ + G
Sbjct: 314 VQLMQMMSMGC 324
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ + MLD V+Y+K L+
Sbjct: 354 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQN 413
Query: 189 QVKVLSMSR 197
QV+ LS +R
Sbjct: 414 QVETLSDNR 422
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 53/63 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R + + H+++ER RR+RI E++RALQEL+P+ NK D+A+ML+E ++Y+K L+LQV++
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQM 269
Query: 193 LSM 195
+SM
Sbjct: 270 MSM 272
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMR------PRVRARRGQATDPHSIAERLRRERIAERIR 158
I+ + H LP P +R ++RA+RG AT P SIAER+RR RI+ERI+
Sbjct: 310 IRGLAHHLSLPISFNKDPVEKFLRFQEPVPHQIRAKRGCATHPRSIAERMRRTRISERIK 369
Query: 159 ALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVA 205
LQEL P ++K T A ML+ V+Y+K L+ QVK L+ ++ + +
Sbjct: 370 KLQELFPDMDKQTSTADMLELAVEYIKGLQRQVKTLTDTKAKCTCSCS 417
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 56/79 (70%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
R RR + H+++E+ RRE+I +++R L+EL+P+ NK D+A+MLD+ +DY+K L+LQ++
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQ 380
Query: 192 VLSMSRVGAPGAVAPLVTT 210
++SM P + P TT
Sbjct: 381 IMSMGNGLWPLMMLPAATT 399
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 115 PSPVPAAPHPPAMRPRVRARRGQAT---DPHSIAERLRRERIAERIRALQELVPSVNKTD 171
P V H A R +A+ T DP S+A + RRERI+ER+R LQELVP+ K D
Sbjct: 188 PQAVSPKKHCGAGRKASKAKSPSTTPTKDPQSLAAKNRRERISERLRTLQELVPNGTKVD 247
Query: 172 RAAMLDEIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
ML++ + YVKFL+LQVKVL+ A G AP ++
Sbjct: 248 LVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEIS 286
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 9/112 (8%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA RPR +R +A + H+++E+ RR +I E+++ALQ LVP+ +KTD+A+MLD+ ++Y+K
Sbjct: 40 PAGRPR--GKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKTDKASMLDDAIEYLK 97
Query: 185 FLRLQVKVLSMSR------VGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPA 230
L+LQV++LSM V PG L T+ + +++ S + N PA
Sbjct: 98 HLQLQVQMLSMRNGVYRPSVNLPGPPEHLPTSQM-CAALNQNSVDASSNPPA 148
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQEL P+++K T+ A MLD V+++K L+
Sbjct: 336 KIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQK 395
Query: 189 QVKVLS 194
QVK L+
Sbjct: 396 QVKTLT 401
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RPR + R ++DP ++A RLRRER++ER+R LQ+LVP +K D A+MLDE Y+KFL+
Sbjct: 283 RPRRKNVR-ISSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLK 341
Query: 188 LQVKVL 193
QV+ L
Sbjct: 342 SQVQAL 347
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 119 PAAPHPPAMRPRVRARRGQAT---DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM 175
P H A R +A+ DP S+A + RRERI+ER+RALQELVP+ K D M
Sbjct: 179 PNKKHCGAGRKASKAKLASTAPTKDPQSLAAKNRRERISERLRALQELVPNGTKVDLVTM 238
Query: 176 LDEIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
L++ + YVKFL+LQVKVL+ A G AP ++
Sbjct: 239 LEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEIS 273
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 56/71 (78%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K
Sbjct: 34 PARPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLK 93
Query: 185 FLRLQVKVLSM 195
L+LQV++LSM
Sbjct: 94 QLQLQVQMLSM 104
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRARRGQATD S+AE +R E+I +R++ LQ+LVP K T + MLDEI++YV+ L+
Sbjct: 10 RVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQSLQC 69
Query: 189 QVKVLSMSRVGAPGAVAPLVTTDLPLSSV 217
Q + LSM GAV P L L S+
Sbjct: 70 QAESLSMK----LGAVHPAPLDHLTLESL 94
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 52/62 (83%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKKLQLQVQM 211
Query: 193 LS 194
LS
Sbjct: 212 LS 213
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI+E+IR LQ+LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 394
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 115 PSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
P + AA R VR ++DP ++A RLRRER++ER+R LQ+LVP +K D A+
Sbjct: 274 PEVIAAAAAEKPRRKNVRI----SSDPQTVAARLRRERVSERLRVLQKLVPGGSKMDTAS 329
Query: 175 MLDEIVDYVKFLRLQVKVL 193
MLDE Y+KFL+ QV+ L
Sbjct: 330 MLDEAASYLKFLKSQVQAL 348
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 53/68 (77%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+ +ER RR+RI E++R+LQEL+P NK D+A++LDE ++Y+K L++Q++++
Sbjct: 232 RRSRAAEVHNQSERRRRDRINEKMRSLQELIPHCNKADKASILDEAIEYLKSLQMQLQIM 291
Query: 194 SMSRVGAP 201
M+ AP
Sbjct: 292 WMTTGMAP 299
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P A P + R+ TDP S+ R RRERI ER++ LQ LVP+ K D + ML+E V YV
Sbjct: 212 PVAANPSGKGRQS-TTDPQSLYARKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYV 270
Query: 184 KFLRLQVKVLS 194
KFL+LQ+K+LS
Sbjct: 271 KFLQLQIKLLS 281
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 59/76 (77%), Gaps = 3/76 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R ++ + HS++E+ RR+RI +++R+LQEL+P+ K D+ ++LDE +DY+K L+LQV+V
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQV 69
Query: 193 LSMSRVGAPGAVAPLV 208
+SM GA +AP++
Sbjct: 70 MSM---GAGMCMAPVM 82
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
PA R A+R +A H+++ER RR+RI E+++ALQEL+P NK D+A+MLDE ++Y+K
Sbjct: 240 PAQRTTT-AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLK 298
Query: 185 FLRLQVKVLSM 195
L+LQ++V+ M
Sbjct: 299 SLQLQLQVVWM 309
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RPRV+ RG ATDP S+ R RRE+IAER+R LQ L+P+ K D MLDE V YV+FL+
Sbjct: 446 RPRVQ--RGSATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLK 503
Query: 188 LQV 190
QV
Sbjct: 504 RQV 506
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI++R+R LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 294 RVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQD 353
Query: 189 QVKVL 193
Q++ L
Sbjct: 354 QIEKL 358
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++K T+ A MLD VDY+K L+
Sbjct: 331 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQK 390
Query: 189 QVKVL 193
Q + L
Sbjct: 391 QAQKL 395
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Query: 128 RPR--VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
RPR ++R +A + H+++E+ RR +I E+++ALQ L+P+ NKTD+A+MLDE ++Y+K
Sbjct: 92 RPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 151
Query: 186 LRLQVKVLSM 195
L+LQV++LSM
Sbjct: 152 LQLQVQMLSM 161
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN-KTDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++ +T+ A MLD V Y+K L+
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 362
Query: 189 QVKVLSMSR 197
QVK L SR
Sbjct: 363 QVKALEESR 371
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Query: 128 RPR--VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
RPR ++R +A + H+++E+ RR +I E+++ALQ L+P+ NKTD+A+MLDE ++Y+K
Sbjct: 92 RPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 151
Query: 186 LRLQVKVLSM 195
L+LQV++LSM
Sbjct: 152 LQLQVQMLSM 161
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRARRG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 279 RVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKD 338
Query: 189 QVKVL 193
QV+ L
Sbjct: 339 QVEKL 343
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 10/85 (11%)
Query: 114 LPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDR 172
P VP++ +RA+RG AT P S+AER+RR RI+ER+R LQE+VP+++K T
Sbjct: 235 FPDSVPSS---------IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCT 285
Query: 173 AAMLDEIVDYVKFLRLQVKVLSMSR 197
+ MLD V+Y+K L+ Q+K +S R
Sbjct: 286 SEMLDLAVEYIKDLQKQLKTMSAKR 310
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ LQELVP +K A+ LDEI+++V+ L+ +
Sbjct: 7 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQRE 66
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 67 VEFLSM 72
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
R RA+RG AT P SIAER+RR RI+ER+R LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 31 RTRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQR 90
Query: 189 QVKVLS 194
QV+ LS
Sbjct: 91 QVQTLS 96
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+PR + R ++DP ++A RLRRER+++R+R LQ+LVP +K D A+MLDE Y+KFLR
Sbjct: 276 KPRRKNVR-ISSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLR 334
Query: 188 LQVKVL 193
QV+ L
Sbjct: 335 SQVQAL 340
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 180 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 239
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 240 VEYLSM 245
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 15/129 (11%)
Query: 85 GFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQAT---DP 141
G L P SG GKR H + + P+ A R +A+ T DP
Sbjct: 143 GLLFPS-TSGGGKRA----------HAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDP 191
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG-A 200
S+A + RRERI+ER+R LQELVP+ K D ML++ + YVKFL+LQVKVL+ A
Sbjct: 192 QSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPA 251
Query: 201 PGAVAPLVT 209
G AP ++
Sbjct: 252 QGGKAPEIS 260
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI++R+R LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 299 RVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQD 358
Query: 189 QVKVL 193
Q++ L
Sbjct: 359 QIEKL 363
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 75/126 (59%), Gaps = 9/126 (7%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 157 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 216
Query: 190 VKVLSMSRV-----GAPGAVAPLVTTDL-PLSSVEDESGEGVRNQPAWEKWSNDGTERQV 243
V+ LSM G G + +TT+ ++S ++G + Q W + G RQ+
Sbjct: 217 VEYLSMRLATVNPRGDFGGLDSFLTTECGRIASFNCKNGIDL-EQVTWPEMGVHGA-RQL 274
Query: 244 AKLMEE 249
+L ++
Sbjct: 275 MQLQQQ 280
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P P++ P R VR ++DP ++A RLRRER++ER+R LQ LVP ++ D A+ML
Sbjct: 275 PAPSSQSKP-RRKNVRI----SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASML 329
Query: 177 DEIVDYVKFLRLQVKVL 193
DE Y+KFL+ QVK L
Sbjct: 330 DEAASYLKFLKTQVKAL 346
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 50/59 (84%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
A+R +A + H+++ER RR+RI E+++ALQEL+P NKTD+A+MLDE ++Y+K L+LQ++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQ 368
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 193 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 252
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 253 VEYLSM 258
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 107 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 166
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 167 VEYLSM 172
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ERI+ LQ+L P K T A MLD V+Y+K L+
Sbjct: 365 KIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQ 424
Query: 189 QVKVLS 194
+VK+LS
Sbjct: 425 KVKILS 430
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN-KTDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR +I+ER+R LQ+LVP+++ +T+ A MLD V Y+K L+
Sbjct: 302 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 361
Query: 189 QVKVLSMSR 197
QVK L +R
Sbjct: 362 QVKTLEETR 370
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 126 AMRPRVRARRGQA--TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
A RP+ + R G++ T+P SI R RRERI ER++ LQ LVP+ K D + ML+E V YV
Sbjct: 219 ARRPKGKGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVHYV 278
Query: 184 KFLRLQVKVLS 194
KFL+LQ+++LS
Sbjct: 279 KFLQLQIRLLS 289
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
+ + R+ R ATDP S+ + RRERI R+R LQ LVP+ K D + ML+E V YVKFL
Sbjct: 200 LNAKTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTKVDISTMLEEAVRYVKFL 259
Query: 187 RLQVKVLS 194
+LQ+K+LS
Sbjct: 260 QLQIKLLS 267
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 49/58 (84%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI E+IR LQ+LVP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 341 STDPQTVAARHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKAL 396
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/39 (87%), Positives = 38/39 (97%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK 169
VRARRGQATDPHSIAERLRRE+IAER++ALQELVP+ NK
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P +PR R R ++DP ++A RLRRER++ER+R LQ LVP ++ D A+MLDE
Sbjct: 271 PSSSQNKPRRRNVR-ISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAG 329
Query: 182 YVKFLRLQVKVL 193
Y+KFL+ QVK L
Sbjct: 330 YLKFLKSQVKAL 341
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 130 RVRA-RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRL 188
R R+ RR +A + H+ +ER RR+RI E++R LQ+L+P+ NKTD+A+ML+E ++Y+K L+
Sbjct: 352 RTRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQF 411
Query: 189 QVKVLSM 195
Q++V+ M
Sbjct: 412 QLQVMWM 418
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA RG AT P SIAER+RR +I+ER++ LQELVP+ ++ T+ A MLD+ V+YVK L+LQ
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 190 VKVLS 194
V+ L+
Sbjct: 439 VQELT 443
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P +PR R R ++DP ++A RLRRER++ER+R LQ LVP ++ D A+MLDE
Sbjct: 272 PSSSQNKPRRRNVR-ISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAG 330
Query: 182 YVKFLRLQVKVL 193
Y+KFL+ QVK L
Sbjct: 331 YLKFLKSQVKAL 342
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 80 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 139
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 140 VEYLSM 145
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 51/70 (72%)
Query: 125 PAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVK 184
+++ + ++ +G A+DP S+ R RRERI +R++ LQ LVP+ K D + ML++ V YVK
Sbjct: 127 KSLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVK 186
Query: 185 FLRLQVKVLS 194
FL+LQ+K+LS
Sbjct: 187 FLQLQIKLLS 196
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P +++P R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE + YV
Sbjct: 138 PESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYV 197
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVT 209
KFL+ QV+ L + P + VT
Sbjct: 198 KFLKTQVQSLERAAANRPAGIGFPVT 223
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 197
+ DP SIA + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 232 SKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDE 291
Query: 198 VG-APGAVAPLVT-----TDLPLSSVED 219
G AP V+ D LSS +D
Sbjct: 292 FWPVQGGKAPDVSQVKEAIDAILSSQKD 319
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 52/62 (83%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI ER++ALQEL+P+ NKTD+A+MLDE ++Y+K L+ Q++V
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 193 LS 194
+
Sbjct: 64 VC 65
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDE 178
A HP VRARRG+ATDPHS+AER+RR++I+ R++ LQ LVP +K T +A +LDE
Sbjct: 153 AKEHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDE 212
Query: 179 IVDYVKFLRLQVKVLS 194
I+ +V L+ QV+ L+
Sbjct: 213 IIRHVLSLQNQVEFLA 228
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 51/60 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
A+R +A + H+ +ER RR+RI E++RALQEL+P+ NKTD+A+ML+E ++Y+K L+LQ++V
Sbjct: 19 AKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASMLEEAIEYLKMLQLQLQV 78
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +++P R + DP SIA R RRERI+E+IR LQ +VP K D A+MLDE
Sbjct: 159 PIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDE 218
Query: 179 IVDYVKFLRLQVKVLSMSRVGA 200
+ YVKFL+ Q+K L GA
Sbjct: 219 AIHYVKFLKTQLKSLQERASGA 240
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 52/61 (85%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++ER RR+RI ER++ALQEL+P+ NKTD+A+MLDE ++Y+K L+ Q++V
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 193 L 193
+
Sbjct: 64 V 64
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 5/83 (6%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R++ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 33 VRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQ 92
Query: 190 VKVLSMSRVGAPGAVAPLVTTDL 212
V++LSM AV P + +L
Sbjct: 93 VEMLSMR----LAAVNPRIDFNL 111
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+ +R ++++ H+++ER RR+RI E++RALQELVP NK D+A+ML+E+++Y+K L++Q
Sbjct: 214 MNKKRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQ 273
Query: 190 VKVLSM 195
V+ +SM
Sbjct: 274 VQAMSM 279
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQAT---DPHSIAERLRRERIAERIRALQELVPS 166
H + + P+ A R +A+ T DP S+A + RRERI+ER+R LQELVP+
Sbjct: 173 HAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPN 232
Query: 167 VNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
K D ML++ + YVKFL+LQVKVL+ A G AP ++
Sbjct: 233 GTKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEIS 276
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 64/92 (69%), Gaps = 7/92 (7%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAP 201
H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LS+ R G
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSL-RNGL- 173
Query: 202 GAVAPLVTTD----LPLSSVEDESGEGVRNQP 229
++ P+ + LPLS + E EG + P
Sbjct: 174 -SLHPMYFHEGLHSLPLSRMSTELSEGNGSNP 204
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQ 189
VRARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 205
Query: 190 VKVLSM 195
V+ LSM
Sbjct: 206 VEYLSM 211
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 30/92 (32%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK--------------------- 169
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNF 337
Query: 170 ---------TDRAAMLDEIVDYVKFLRLQVKV 192
T +A MLDEI++YV+ L+ QV+V
Sbjct: 338 QRLLDLVKVTGKAVMLDEIINYVQSLQCQVEV 369
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
ARR +A H+ +ER RR+RI E+++ALQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+
Sbjct: 257 ARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQF 316
Query: 193 LSM 195
+S+
Sbjct: 317 MSV 319
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI+E+IR LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 278 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 333
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER+R LQELVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 265
Query: 200 -APGAVAPLVT 209
A G AP ++
Sbjct: 266 PAQGGKAPEIS 276
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+P+ ++ G A D SIA + RRERI+ER++ LQ+LVP+ +K D ML++ + YVKFL+
Sbjct: 228 KPKPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSKVDLVTMLEKAISYVKFLQ 287
Query: 188 LQVKVLSMSRVG-APGAVAPLVT 209
LQVKVL+ + G AP ++
Sbjct: 288 LQVKVLATDELWPVQGGKAPDIS 310
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 110 HGQPLPSPVPAAPHPPAMRPRVRARRGQAT---DPHSIAERLRRERIAERIRALQELVPS 166
H + + P+ A R +A+ T DP S+A + RRERI+ER+R LQELVP+
Sbjct: 175 HAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELVPN 234
Query: 167 VNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
K D ML++ + YVKFL+LQVKVL+ A G AP ++
Sbjct: 235 GTKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAPEIS 278
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI+E+IR LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK---TDRAAMLDEIVDYVKFLR 187
VRARRGQATD HS+AER RRE+I R++ LQELVP +K + A +LD+I+++V+ L+
Sbjct: 32 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQ 91
Query: 188 LQVKVLSM 195
QV+ LSM
Sbjct: 92 RQVEFLSM 99
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
+ +A R AT+ S+ R RRERI ER+R LQ LVP+ K D + ML+E V+YVKFL+LQ
Sbjct: 209 KAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQ 268
Query: 190 VKVLSMSRVG--APGAVAPL-VTTDLPLS 215
+K+LS + AP A + + DL LS
Sbjct: 269 IKLLSSDEMWMYAPIAYNGMNIGIDLNLS 297
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P A+R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 113 PVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 172
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+++L
Sbjct: 173 AIHYVKFLKRQIRLL 187
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 124 PPAMRPRVRARRGQ--ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P A + +A+ G ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E +
Sbjct: 212 PVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMH 271
Query: 182 YVKFLRLQVKVLSMSRVG--APGAVAPL-VTTDLPLS 215
YVKFL+LQ+K+LS + AP A + + DL LS
Sbjct: 272 YVKFLQLQIKLLSSDEMWMYAPIAYNGMNIGIDLNLS 308
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 124 PPAMRPRVRARRGQ--ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
P A + +A+ G ATDP S+ R RRERI ER++ LQ LVP+ K D + ML+E +
Sbjct: 212 PVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAMH 271
Query: 182 YVKFLRLQVKVLSMSRVG--APGAVAPL-VTTDLPLS 215
YVKFL+LQ+K+LS + AP A + + DL LS
Sbjct: 272 YVKFLQLQIKLLSSDEMWMYAPIAYNGMNIGIDLNLS 308
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 54/66 (81%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQ
Sbjct: 47 RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQ 106
Query: 190 VKVLSM 195
V++LSM
Sbjct: 107 VQMLSM 112
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 54/66 (81%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQ
Sbjct: 25 RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQ 84
Query: 190 VKVLSM 195
V++LSM
Sbjct: 85 VQMLSM 90
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P +++P R + DP S+A R RRERI+ERI+ LQ LVP K D A+MLDE + YV
Sbjct: 123 PESIKPPKRRNVKISKDPQSVAARHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYV 182
Query: 184 KFLRLQVKVLSMSRVGAPGAVAPLVTTDLP 213
KFL+ QV+ L + GA PL P
Sbjct: 183 KFLKKQVQTLEQA-----GASRPLNVVGFP 207
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
P +++P R + DP S+A R RRERI+ER+R LQ LVP K D A+MLDE + YV
Sbjct: 150 PESVKPPKRRNVKISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYV 209
Query: 184 KFLRLQVKVLSMSRVGAPG 202
KFL+ QV+ L + P
Sbjct: 210 KFLKKQVQSLEQAGANTPN 228
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 111 GQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT 170
G AAP + + + A DP SIA + RRERI+ER++ LQELVP+ +K
Sbjct: 167 GSVCKKQCTAAP------KKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKV 220
Query: 171 DRAAMLDEIVDYVKFLRLQVKVLSMSRVG-APGAVAPLVT 209
D ML++ + YVKFL+LQVK+L+ G AP ++
Sbjct: 221 DLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDIS 260
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 54/66 (81%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQ
Sbjct: 47 RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQ 106
Query: 190 VKVLSM 195
V++LSM
Sbjct: 107 VQMLSM 112
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI+E+IR LQ LVP K D A+MLDE +Y KFLR QVK L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKAL 331
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP SIA RLRRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 97 PVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTASMLDE 156
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+++L
Sbjct: 157 AIRYVKFLKRQIRLL 171
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI+E+IR LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 305 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 360
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 51/63 (80%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+ +ER RR+RI E++R LQ+L+P+ NKTD+A+ML+E ++Y+K L+ Q++V
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQV 415
Query: 193 LSM 195
+ M
Sbjct: 416 MWM 418
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 202
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
G A DP SIA + RRERI+ER++ LQ+LVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAT 291
Query: 196 SRVG-APGAVAPLVT 209
G AP ++
Sbjct: 292 DEFWPVQGGKAPDIS 306
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRARRG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD V+Y+K L+
Sbjct: 151 RVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELKD 210
Query: 189 QVKVL 193
QV+ L
Sbjct: 211 QVEKL 215
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 52/67 (77%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
AMR + +R +A H+ +ER RR+RI ++++ LQ+LVP+ +KTD+A+MLDE++DY+K
Sbjct: 264 AMRSSISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQ 323
Query: 186 LRLQVKV 192
L+ QV+V
Sbjct: 324 LQAQVQV 330
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 127 MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFL 186
++ + R G A+DP + + RRERI ER++ LQ LVP+ K D + ML+E V YVKFL
Sbjct: 234 LKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFL 293
Query: 187 RLQVKVLS 194
++Q+K+LS
Sbjct: 294 QVQIKLLS 301
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 85 GFLKPEEASGSGKRFPEEHA---IKNVFHGQPLPSPVPAAPHPPAM---RPRVRARRGQA 138
G A +G P+ A +K + + PV PA +PR + R +
Sbjct: 224 GLQDTNSAGAAGGYEPDMEAMAQVKEMIYRAAAMRPVSLVTESPAAGISKPRRKNVR-IS 282
Query: 139 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+DP ++A RLRRER+++R+R LQ+LVP +K D A+MLDE Y+KFL+ QV+ L
Sbjct: 283 SDPQTVAARLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQAL 337
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+ +P S+A R RR++I+ERIR L++L+P NK D A MLDE ++YVKFL+LQV++L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 442
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P A +P++ + DP S+A + RRERI+ER++ LQELVP+ +K D ML++
Sbjct: 194 PCTSASKAAKPKLNPFK----DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEK 249
Query: 179 IVDYVKFLRLQVKVLS 194
+ YVKFL+LQVKVL+
Sbjct: 250 AISYVKFLQLQVKVLA 265
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 48/60 (80%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
R+R+G A DP SIA R RRERI++R++ LQ+LVP+ +K D ML++ ++YVKF++LQ++
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKFMQLQLQ 293
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R ++R +A H ++ER RR++I E ++ALQEL+P KTDR++MLD++++YVK L+
Sbjct: 268 RDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQ 327
Query: 188 LQVKVLSMSRVGAP 201
Q+++ SM V P
Sbjct: 328 SQIQMFSMGHVMIP 341
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 74 PLGLS--LEQ-GKGGFLKPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPA---- 126
PLG S L+Q G + +S + KR ++ N F + PA+
Sbjct: 170 PLGSSQALDQPGAPRIISNSSSSPTRKRSADDQNTTNAFSKREKIDSSPASSCCTTALNT 229
Query: 127 -MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
++PR +R+G A DP SIA R RRERI++R++ LQ+LVP+ +K D ML++ ++YVKF
Sbjct: 230 NLKPR--SRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKVDLVTMLEKAINYVKF 287
Query: 186 LRLQVK 191
++LQ++
Sbjct: 288 MQLQLQ 293
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 88 KPEEASGSGKRFPEEHAIKNVFHGQPLPSPVPAAP--HPPAMRPRVRARRGQATDPHSIA 145
K ++ S KR P+ N+ +P A P HP VRARRG+ATD HS+A
Sbjct: 33 KVKKESKREKRNPKSSVSTNLERQRPTKRQKKAPPLEHPTGY-VHVRARRGEATDSHSLA 91
Query: 146 ERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLR 187
ER+RRERI+ +++ LQ LVP ++ T +A +LDEI+ YV+ L+
Sbjct: 92 ERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLK 134
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 59/76 (77%), Gaps = 3/76 (3%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+++ ++T+ H+++ER RR+RI ER+RALQEL+P+ NK D+A+MLDE ++Y+K L+LQ+++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQI 484
Query: 193 LSMSRVGAPGAVAPLV 208
+SM G G P+
Sbjct: 485 MSM---GGGGLYMPMT 497
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 47/123 (38%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERL------------------------------- 148
AA PP VRARRGQATD HS+AER+
Sbjct: 146 AAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQ 205
Query: 149 -RRERIAERIRALQELVPSVNK---------------TDRAAMLDEIVDYVKFLRLQVKV 192
RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 206 VRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEF 265
Query: 193 LSM 195
LSM
Sbjct: 266 LSM 268
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 198
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 11/96 (11%)
Query: 112 QPL-PSPVPAAPHPPA--MRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVN 168
+PL PS V P +R +R +A + H+++ER RR+RI E+++ALQEL+P N
Sbjct: 30 KPLWPSDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN 89
Query: 169 K--------TDRAAMLDEIVDYVKFLRLQVKVLSMS 196
K TD+A+MLDE ++Y+K L+LQV++ ++
Sbjct: 90 KLSSFTDSQTDKASMLDEAIEYLKTLQLQVQIFVLN 125
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA-MLDEIVDYVKFLRL 188
R RA+RG AT P SIAER+RR RI+ER++ LQ+LVP++ KT + MLDE V+YVK L++
Sbjct: 2 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQM 61
Query: 189 QVKVLS 194
+VK L+
Sbjct: 62 KVKELT 67
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
R RA+RG AT P SIAER+RR +I+ER++ LQ+LVP+++K T+ + MLDE V+YVK L+
Sbjct: 31 RTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQR 90
Query: 189 QVKVLS 194
+V+ LS
Sbjct: 91 KVQELS 96
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA-MLDEIVDYVKFLRL 188
R RA+RG AT P SIAER+RR RI+ER++ LQ+LVP++ KT A MLDE V+YVK L++
Sbjct: 4 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQV 63
Query: 189 QVKVL 193
+V L
Sbjct: 64 KVSEL 68
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+RR +A H+ +ER RR+RI ++++ALQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQA 302
Query: 193 LSMSRVGAPGAVAPL 207
+S+ + P + PL
Sbjct: 303 MSVRNM--PQMMMPL 315
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER RR RI+ RI+ LQ+L P +K T A MLD V+Y+K L+
Sbjct: 359 KIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQK 418
Query: 189 QVKVLSMSR 197
QVK+L +R
Sbjct: 419 QVKILRDTR 427
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV RPR R R ++DP ++A R RRERI+ER+R LQ+LV
Sbjct: 351 VKEMIYRAAAMRPVTLGAEDAGERPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLV 409
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRVGAPGA 203
P K D A+MLDE +Y++FL+ Q++ L ++ R P A
Sbjct: 410 PGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNA 449
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 48/60 (80%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAP 201
H+ +ER RR+RI E+++ALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++L M + AP
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAP 77
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER RR RI+ RI+ LQ+L P +K T A MLD V+Y+K L+
Sbjct: 355 KIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQK 414
Query: 189 QVKVLSMSR 197
QVK+L +R
Sbjct: 415 QVKMLRDTR 423
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 47/123 (38%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERL------------------------------- 148
AA PP VRARRGQATD HS+AER+
Sbjct: 267 AAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQ 326
Query: 149 -RRERIAERIRALQELVPSVNK---------------TDRAAMLDEIVDYVKFLRLQVKV 192
RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 327 VRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEF 386
Query: 193 LSM 195
LSM
Sbjct: 387 LSM 389
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 47/123 (38%)
Query: 120 AAPHPPAMRPRVRARRGQATDPHSIAERL------------------------------- 148
AA PP VRARRGQATD HS+AER+
Sbjct: 267 AAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQ 326
Query: 149 -RRERIAERIRALQELVPSVNK---------------TDRAAMLDEIVDYVKFLRLQVKV 192
RRE+I+ER++ LQ+LVP NK T +A MLDEI++YV+ L+ QV+
Sbjct: 327 VRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDEIINYVQSLQRQVEF 386
Query: 193 LSM 195
LSM
Sbjct: 387 LSM 389
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
A +P+ R ++DP ++A R RRERI++RIR LQ++VP +K D A+MLDE +Y+KF
Sbjct: 381 AEKPK-RKNVKISSDPQTVAARQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKF 439
Query: 186 LRLQVKVL 193
LR QVK L
Sbjct: 440 LRSQVKAL 447
>gi|140084395|gb|ABO84937.1| indehiscent 1 [Physcomitrella patens]
Length = 67
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+ DP S+A R RRERI++RIR LQ LVP K D A+MLDE + YVKFL+LQ++V
Sbjct: 3 SKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQV 57
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFW 269
Query: 200 -APGAVAPLVT-----TDLPLSSVEDESG 222
A G AP ++ D LSS + +S
Sbjct: 270 PAQGGKAPDISQVKEAIDAILSSTQRDSN 298
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Query: 126 AMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKF 185
A + + +A DP S+A ++RRE+IAE+++ LQ+LVP+ K D ML++ + YVKF
Sbjct: 189 ARKSKAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKF 248
Query: 186 LRLQVKVLSMSRVG-APGAVAPLVTTDLPLSSVED 219
L+LQVKVL+ A G AP LS V+D
Sbjct: 249 LQLQVKVLAADEFWPAQGGKAP------ELSQVKD 277
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 50/59 (84%)
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
+A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 234
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R RA+RG ATDP S+ R RRE+I ER++ LQ LVP+ + D ML+E + +VKFL Q
Sbjct: 469 RPRAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVDIVTMLEEAIHFVKFLEFQ 528
Query: 190 VKVL 193
+++L
Sbjct: 529 LELL 532
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV RPR R R ++DP ++A R RRERI+ER+R LQ+LV
Sbjct: 339 VKEMIYRAAAMRPVTLGAEDAGERPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLV 397
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRVGAPGA 203
P K D A+MLDE +Y++FL+ Q++ L ++ R P A
Sbjct: 398 PGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNA 437
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+TDP ++A R RRERI++RIR LQ +VP +K D A+MLDE +Y+KFLR QVK L
Sbjct: 205 STDPQTVAARQRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKAL 260
>gi|224095942|ref|XP_002310509.1| predicted protein [Populus trichocarpa]
gi|222853412|gb|EEE90959.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 100 PEEH--AIKNVFHGQPLPSPV---PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIA 154
PEE A+K + + PV PA H P R VR + DP S+A RLRRERI+
Sbjct: 3 PEEELGAMKEMMYRVAAMQPVDIDPATIHKPK-RKNVRI----SDDPQSVAARLRRERIS 57
Query: 155 ERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
E+IR LQ LVP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 58 EKIRILQRLVPGGRKMDTASMLDEAIRYVKFLKRQIRSLQ 97
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRLQ 189
VRAR GQATD ++AER+RR +I E++R LQ +VP KT A MLDEI++YV+ L+ Q
Sbjct: 153 VRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQNQ 212
Query: 190 VKVLSMSRVGAPGAV 204
V+ LS+ ++ AP
Sbjct: 213 VEFLSL-KLTAPSTF 226
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV RPR R R ++DP ++A R RRERI+ER+R LQ+LV
Sbjct: 322 VKEMIYRAAAMRPVSLGSEDAGERPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLV 380
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
P K D A+MLDE +Y++FL+ QV+ L
Sbjct: 381 PGGAKMDTASMLDEAANYLRFLKSQVREL 409
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 202 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 261
Query: 200 -APGAVAPLVT 209
A G AP ++
Sbjct: 262 PAQGGKAPDIS 272
>gi|326523389|dbj|BAJ88735.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 5/83 (6%)
Query: 112 QPLPSPVPAAPHPPAM-----RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPS 166
+PLPS A+ P +PR R ++DP ++A RLRRE+++ER+RALQ LVP
Sbjct: 270 RPLPSLTGASAGDPTHEPSPSKPRRRKNVRISSDPQTVAARLRREKVSERLRALQRLVPG 329
Query: 167 VNKTDRAAMLDEIVDYVKFLRLQ 189
+K D A+MLDE Y+KFL+ Q
Sbjct: 330 GSKMDTASMLDEAASYLKFLKSQ 352
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 50/59 (84%)
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
+A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV RPR R R ++DP ++A R RRERI+ER+R LQ+LV
Sbjct: 335 VKEMIYRAAAMRPVTLGAEDAGERPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLV 393
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRVGAPGA 203
P K D A+MLDE +Y++FL+ Q++ L ++ R P A
Sbjct: 394 PGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNA 433
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 125 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 184
Query: 179 IVDYVKFLRLQVKVL-SMSRVGAPGAVAPLVTTD 211
+ YVKFL+ Q+++L S+S P TT+
Sbjct: 185 AIRYVKFLKRQIRLLQSISHPSQPPQCIGFATTN 218
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 49/58 (84%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
A + H+++E+ RR +I E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++LSM
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSM 141
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 102 PVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 161
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+K+L
Sbjct: 162 AIRYVKFLKRQIKLL 176
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 108 VFHGQPLPSP-VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPS 166
+ PL P VP+ +RP+ R R + DP S+A R RRERI++R+R LQ VP
Sbjct: 359 LLFSTPLTLPNVPSMEEIVQLRPKRRNVRI-SKDPQSVAARHRRERISDRVRVLQHFVPG 417
Query: 167 VNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
K D A+MLDE + YVKFL+ Q++ L R+G
Sbjct: 418 GTKMDTASMLDEAIHYVKFLQQQLQTL--ERIG 448
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
+ DP S+A + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 122 PHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
P PP VRARRGQ D H AER+RRE+I+E + LQ+LVP ++ T +A LDEI+
Sbjct: 12 PEPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEII 71
Query: 181 DYVKFLRLQVKVLSM 195
+YV+ L+ QV++L M
Sbjct: 72 NYVQSLKRQVELLYM 86
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 48/60 (80%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAP 201
H+ +ER RR+RI E+++ALQEL+P+ KTD+ +MLDE +DY+K L++Q+++L M + AP
Sbjct: 22 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQMLVMGKGTAP 81
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 9/74 (12%)
Query: 131 VRARRGQATDPHSIAERL--------RRERIAERIRALQELVPSVNKTDRAAM-LDEIVD 181
VRARRGQATD HS+AER+ RRE+I R++ LQELVP +K A+ LDEI++
Sbjct: 129 VRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDEIIN 188
Query: 182 YVKFLRLQVKVLSM 195
+V+ L+ QV++LSM
Sbjct: 189 HVQTLQRQVEMLSM 202
>gi|296086723|emb|CBI32358.3| unnamed protein product [Vitis vinifera]
Length = 403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 124 PPAM--RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
PP +PR A R +A S +R RR RI+ER++ALQ L+P ++ +A++LD+I+D
Sbjct: 258 PPCFQSKPRSSASRQRA----SATDRRRRLRISERLKALQVLLPH-SEGGKASVLDDIID 312
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTER 241
Y+K L+LQ+K LS SR+G P + EG + ++ + E
Sbjct: 313 YIKHLQLQIKDLSQSRLGGQSTSDPFIFL------------EGYGHYILHDQMLKEPLEE 360
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
+ KL+E N A Q L+ + L +MP++L +
Sbjct: 361 MMGKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 393
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
+ DP S+A + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 246 SKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 302
>gi|359479869|ref|XP_003632365.1| PREDICTED: uncharacterized protein LOC100853547 [Vitis vinifera]
Length = 352
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 124 PPAM--RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVD 181
PP +PR A R +A S +R RR RI+ER++ALQ L+P ++ +A++LD+I+D
Sbjct: 213 PPCFQSKPRSSASRQRA----SATDRRRRLRISERLKALQVLLPH-SEGGKASVLDDIID 267
Query: 182 YVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSSVEDESGEGVRNQPAWEKWSNDGTER 241
Y+K L+LQ+K LS SR+G P + EG + ++ + E
Sbjct: 268 YIKHLQLQIKDLSQSRLGGQSTSDPFIFL------------EGYGHYILHDQMLKEPLEE 315
Query: 242 QVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
+ KL+E N A Q L+ + L +MP++L +
Sbjct: 316 MMGKLLEVNPSEATQLLEGRGLYVMPMTLVEGL 348
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 112 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 171
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+++L
Sbjct: 172 AIRYVKFLKRQIRLL 186
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 105 IKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELV 164
+K + + PV RPR R R ++DP ++A R RRERI+ER+R LQ+LV
Sbjct: 339 VKEMIYRAAAMRPVTLGAEDAGERPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLV 397
Query: 165 PSVNKTDRAAMLDEIVDYVKFLRLQVKVL-SMSRVGAPGA 203
P K D A+MLDE +Y++FL+ Q++ L ++ R P A
Sbjct: 398 PGGAKMDTASMLDEAANYLRFLKSQIRELQTLDRRNYPNA 437
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI++RI+ LQ L P +K T A MLD V+Y+K L+
Sbjct: 321 KIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQE 380
Query: 189 QVKVLS 194
QV++L+
Sbjct: 381 QVQILT 386
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI++RI+ LQ L P +K T A MLD V+Y+K L+
Sbjct: 318 KIRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQE 377
Query: 189 QVKVLS 194
QV++L+
Sbjct: 378 QVQILT 383
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 50/59 (84%)
Query: 137 QATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
+A + H+++E+ RR RI E+++ALQ L+P+ NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDEFW 263
Query: 200 -APGAVAPLVT 209
A G AP ++
Sbjct: 264 PAQGGKAPDIS 274
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A ++RRE+IAE+++ LQ+LVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 237 DPQSVAAKVRREKIAEKLKVLQDLVPNGTKVDLVTMLEKAITYVKFLQLQVKVLAADEFW 296
Query: 200 -APGAVAPLVTTDLPLSSVED 219
A G AP LS V+D
Sbjct: 297 PAQGGKAP------DLSQVKD 311
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
V +R +A H+ +ER RR++I +R++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 323
Query: 191 KVLSMSRVGAPGAVAPLV 208
++ M+R+ + PL
Sbjct: 324 QM--MNRINMSSMMLPLT 339
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFW 269
Query: 200 -APGAVAPLVT 209
A G AP ++
Sbjct: 270 PAQGGKAPDIS 280
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD VDY+K L+
Sbjct: 280 RVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKD 339
Query: 189 QVKVL 193
+V+ L
Sbjct: 340 RVEKL 344
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 117 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 176
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+++L
Sbjct: 177 AIRYVKFLKRQIRLL 191
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQ 189
+RA RG AT P SIAER+RR +I+ER++ LQ+LVPS+++ T+ A MLD+ V+YVK L+ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 190 VKVLSMS 196
V+ LS +
Sbjct: 123 VQELSKT 129
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI+E++R LQ LVP+++K T + MLD VD++K L+
Sbjct: 284 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 343
Query: 189 QVKVL 193
Q++ L
Sbjct: 344 QLQTL 348
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A RLRRERI+E+IR LQ LVP K D A+ML+E
Sbjct: 92 PVEIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRLVPGGRKMDTASMLEE 151
Query: 179 IVDYVKFLRLQVKVL 193
+ YVKFL+ Q+++L
Sbjct: 152 AIRYVKFLKRQIRLL 166
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQELVP+ K D ML++ + YVKFL++QVKVL+
Sbjct: 142 DPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFW 201
Query: 200 -APGAVAPLVT-----TDLPLSSVEDES 221
A G AP ++ D LSS + +S
Sbjct: 202 PAQGGKAPDISQVKEAIDAILSSSQRDS 229
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 139 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
TDP S+ R RRERI ER++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 139 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
TDP S+ R RRERI ER++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 139 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
TDP S+ R RRERI ER++ LQ L+P+ K D + ML+E V YVKFL+LQ+K+LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 295
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + + PV P +P+ R R + DP S+A R RRERI+E+IR LQ L
Sbjct: 84 AMKEMMYKMAVMQPVDIDP-ASVRKPKRRNVR-ISDDPQSVAARHRRERISEKIRILQRL 141
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 142 VPGGTKMDTASMLDEAILYVKFLKRQIRLL 171
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P+ A +P+ R R ++DP ++A R RRERI+ +IR LQ LVP K D A+ML
Sbjct: 270 PITATDCLGGSKPKRRNVR-ISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASML 328
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DE + YVK+L+ QV+ + M
Sbjct: 329 DEAIHYVKYLKSQVQAMEM 347
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P+ A +P+ R R ++DP ++A R RRERI+ +IR LQ LVP K D A+ML
Sbjct: 271 PITATDCLGGSKPKRRNVR-ISSDPQTVAARHRRERISTKIRILQRLVPGGTKMDTASML 329
Query: 177 DEIVDYVKFLRLQVKVLSM 195
DE + YVK+L+ QV+ + M
Sbjct: 330 DEAIHYVKYLKSQVQAMEM 348
>gi|168020611|ref|XP_001762836.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685945|gb|EDQ72337.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 72
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 45/56 (80%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+ +P S+A R RR++I+ERIR L++L+P NK D A MLDE ++YVKFL+LQV++L
Sbjct: 15 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDTATMLDEAIEYVKFLQLQVQIL 70
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKT-DRAAMLDEIVDYVKFLRL 188
VRARRGQATD HS+AER+RR +I E+++ LQ +VP KT A MLDEI++Y L+L
Sbjct: 155 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYFLSLKL 213
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P S+AER+RR RI+E+I+ L+ L P +K T A MLD V+Y+K L+
Sbjct: 166 KIRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQE 225
Query: 189 QVKVLSMSR 197
QVK L+ R
Sbjct: 226 QVKTLTDCR 234
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER RR RI+ERI+ LQ+L P K T A MLD V+++K L+
Sbjct: 360 KIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQ 419
Query: 189 QVKVLS 194
QV++LS
Sbjct: 420 QVQILS 425
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAM-LDEIVDYVKFLRLQVK 191
ARRGQATD HS+AER RRE+I R+ L+ELVP +K A+ LDEI+++V+ L+ QV+
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 192 VLSM 195
LSM
Sbjct: 61 YLSM 64
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
R+R Q H++ ER RR++I +R+R L+EL+P+ NKTD+A+MLD+ ++Y+K L+LQ++
Sbjct: 749 RSRNAQV---HNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQ 805
Query: 192 V 192
V
Sbjct: 806 V 806
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 51/62 (82%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A H+ +ER RR+RI ++++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+++
Sbjct: 220 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 279
Query: 194 SM 195
S+
Sbjct: 280 SV 281
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 41/58 (70%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
G ATDP S+ R RRE+IAER+R LQ L+P+ K D MLDE V YV+FL+ QV +L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGKVDIVTMLDEAVHYVQFLKRQVTLL 58
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 51/62 (82%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A H+ +ER RR+RI ++++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV+++
Sbjct: 182 RRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM 241
Query: 194 SM 195
S+
Sbjct: 242 SV 243
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + + PV P +P+ R R + DP S+A R RRERI+E+IR LQ L
Sbjct: 93 AMKEMMYKMAVMQPVDIDP-ASVRKPKRRNVR-ISDDPQSVAARHRRERISEKIRILQRL 150
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + YVKFL+ Q++ L
Sbjct: 151 VPGGTKMDTASMLDEAIRYVKFLKRQIRFL 180
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + PV P +PR R R + DP S+A R RRERI+ER+R LQ L
Sbjct: 128 AMKEMMYRIAAMQPVDIDP-ATVKKPRRRNVRI-SEDPQSVAARHRRERISERVRVLQRL 185
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
++DP ++A RLRRER++ER+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 357
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RP+ R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE + YVKFL+
Sbjct: 91 RPKRRNVR-ISDDPASVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLK 149
Query: 188 LQVKVL 193
Q+++L
Sbjct: 150 RQIRLL 155
>gi|356551793|ref|XP_003544258.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 110
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
DP S+A + RRERI+ER++ LQELVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 26 DPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLA 80
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 64/94 (68%), Gaps = 10/94 (10%)
Query: 120 AAPHPPAMRPRVR-----ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
AA H A R + RR +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+
Sbjct: 316 AAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKAS 375
Query: 175 MLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLV 208
MLDE ++Y+K L+LQ++++ M G VAP++
Sbjct: 376 MLDEAIEYLKSLQLQLQLMWMG-----GGVAPMM 404
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 118 VPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLD 177
+P + RP+ R R + D S+A R RRERI++RIR LQ LVP K D A+MLD
Sbjct: 351 IPTLEDIASSRPKRRNVR-ISIDTQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLD 409
Query: 178 EIVDYVKFLRLQVKVLSMSRVGA--PGAVA 205
E + Y+KFL+ Q++ L + PG VA
Sbjct: 410 EAIHYIKFLKQQLQTLEQLGIDGCDPGDVA 439
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + PV P +PR R R + DP S+A R RRERI+ER+R LQ L
Sbjct: 128 AMKEMMYRIAAMQPVDIDP-ATVKKPRRRNVR-ISEDPQSVAARHRRERISERVRVLQRL 185
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + PV P +PR R R + DP S+A R RRERI+ER+R LQ L
Sbjct: 127 AMKEMMYRIAAMQPVDIDP-ATVKKPRRRNVR-ISEDPQSVAARHRRERISERVRVLQRL 184
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 185 VPGGTKMDTASMLDEAIRYIKFLKRQVQEL 214
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PPA P+ R R G ATDP SIA R RRE+ +RIR LQ LVP+ + D ML + +YV
Sbjct: 670 PPA--PKQRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVHMLSQTFEYV 727
Query: 184 KFLRLQVKVL 193
+FL+ +V L
Sbjct: 728 RFLQHKVWDL 737
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
++DP ++A RLRRER++ER+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
++DP ++A RLRRER++ER+R LQ LVP +K D A MLDE Y+KFL+ Q++ L
Sbjct: 232 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 287
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI+E++R LQ LVP+++K T + MLD VD++K L+
Sbjct: 133 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQS 192
Query: 189 QVKVL 193
Q++ L
Sbjct: 193 QLQTL 197
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 46/60 (76%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
R + +P SIA R RR++I+ER+R L++LVP NK D A+MLDE + +VKFL++QV++L
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 64/94 (68%), Gaps = 10/94 (10%)
Query: 120 AAPHPPAMRPRVR-----ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAA 174
AA H A R + RR +A + H+++ER RR+RI E+++ALQEL+P NK+D+A+
Sbjct: 316 AAEHESAARNKASQRSGSTRRSRAAEVHNLSERRRRDRINEKMKALQELIPHSNKSDKAS 375
Query: 175 MLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLV 208
MLDE ++Y+K L+LQ++++ M G VAP++
Sbjct: 376 MLDEAIEYLKSLQLQLQLMWMG-----GGVAPMM 404
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 139 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
TDP S+ R RRE+I ER++ LQ LVP+ K D + ML+E V Y+KF++LQ+K+LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKVDISTMLEEAVHYIKFMQLQIKLLS 309
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
V +R +A H+ +ER RR++I +R++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
Query: 191 KVLSMSRVGAP 201
+ MSR+ P
Sbjct: 267 SM--MSRMNMP 275
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 46/60 (76%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
R + +P SIA R RR++I+ER+R L++LVP NK D A+MLDE + +VKFL++QV++L
Sbjct: 381 RFKETVEPQSIAARQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLL 440
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
RPR R R ++DP ++A R RRERI+ER+R LQ+LVP K D A+MLDE Y++FL+
Sbjct: 312 RPRRRNVR-ISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQ 370
Query: 188 LQVKVL 193
QV+ L
Sbjct: 371 SQVREL 376
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 119 PAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDE 178
P P +R R + DP S+A R RRERI+E+IR LQ LVP K D A+MLDE
Sbjct: 76 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDE 135
Query: 179 IVDYVKFLRLQVKVLSMSRVGAPGAV-APLVTTDLPLSSVE 218
+ YVKFL+ Q++ L + P V A L T D ++S +
Sbjct: 136 AIRYVKFLKRQIRQLQSNHHPLPTDVTACLSTPDWAVTSTK 176
>gi|168023485|ref|XP_001764268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684420|gb|EDQ70822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 86
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 117 PVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAML 176
P+P + RP+ R R + DP S+A R RRERI++RIR LQ LVP K D A+ML
Sbjct: 13 PIPTLEEIASSRPKRRNVRI-SKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTASML 71
Query: 177 DEIVDYVKFLRLQVK 191
DE + YVKFL+LQ++
Sbjct: 72 DEAIHYVKFLKLQLQ 86
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
V +R +A H+ +ER RR++I +R++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
Query: 191 KVLSMSRVGAP 201
+ MSR+ P
Sbjct: 267 SM--MSRMNMP 275
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 51/68 (75%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R R +R H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+
Sbjct: 83 RQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQLQ 142
Query: 188 LQVKVLSM 195
LQV+ L++
Sbjct: 143 LQVQTLAV 150
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 51/64 (79%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
V +R +A H+ +ER RR++I +R++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 336
Query: 191 KVLS 194
+++S
Sbjct: 337 QMMS 340
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A + RRERI+ER++ LQ+LVP+ +K D ML++ + YVKFL+LQVKVL+
Sbjct: 256 DPQSLAAKNRRERISERLKILQDLVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFW 315
Query: 200 -APGAVAPLVT-----TDLPLSSVED 219
G AP ++ D LSS D
Sbjct: 316 PVQGGKAPDISQVKEAIDAILSSQRD 341
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
DP S ++RRERI+ER++ LQ+LVP+ K D ML++ + YVKFL+LQVKVL+
Sbjct: 171 DPQSAVAKVRRERISERLKVLQDLVPNGTKVDMVTMLEKAITYVKFLQLQVKVLA 225
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 51/68 (75%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
R R +R H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+
Sbjct: 83 RQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQ 142
Query: 188 LQVKVLSM 195
LQV+ L++
Sbjct: 143 LQVQTLAV 150
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 141 PHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG- 199
P S A ++RRERI+ER++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 267
Query: 200 APGAVAPLVTTDLPLSSVED 219
A G AP LS V+D
Sbjct: 268 AQGGKAP------ELSQVKD 281
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 141 PHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG- 199
P S A ++RRERI+ER++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 209 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 268
Query: 200 APGAVAPLVTTDLPLSSVED 219
A G AP LS V+D
Sbjct: 269 AQGGKAP------ELSQVKD 282
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P ++ R RA+RG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD V Y
Sbjct: 86 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 145
Query: 183 VKFLRLQVKVL 193
+K L+ QV+ L
Sbjct: 146 IKELQGQVEKL 156
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 52/63 (82%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
++R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLDE ++Y+K L+LQV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLKLLQLQVQG 193
Query: 193 LSM 195
LS+
Sbjct: 194 LSV 196
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 196
DP S+A R RRERI+++IR LQ LVP K D A+MLDE V YVKFL+ QV+ L S
Sbjct: 115 DPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLEQS 171
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
G ATDP S+ R RRE+I ER++ LQ LVP+ K D MLDE + YV+FL+LQV +L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVTLL 58
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ V +R +A H+ +ER RR++I +R++ LQ+LVP+ NKTD+A+MLDE+++Y+K L+
Sbjct: 284 KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQ 343
Query: 188 LQVK 191
QV+
Sbjct: 344 AQVQ 347
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%)
Query: 128 RPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLR 187
+ V +R +A H+ +ER RR++I +R++ LQ+LVP+ NKTD+A+MLDE+++Y+K L+
Sbjct: 284 KSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQ 343
Query: 188 LQVK 191
QV+
Sbjct: 344 AQVQ 347
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 134 RRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RR +A + H+++ER RR+RI ER++ALQEL+P +KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 312
Query: 194 SMSRVGAPGAVAPLV 208
M G+ A AP++
Sbjct: 313 WM---GSGMAAAPMM 324
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYV 183
PPA P+ R R G ATDP SIA R RRE+ +RIR LQ LVP+ + D ML + +YV
Sbjct: 669 PPA--PKQRRRHGTATDPQSIAARTRREKFTDRIRILQGLVPNGERLDTVHMLSQTFEYV 726
Query: 184 KFLRLQVKVL-----SMSRV 198
+FL+ +V L SMS V
Sbjct: 727 RFLQHKVWDLYNNKDSMSEV 746
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV- 190
R +R + + H+++E+ RRE+I +++R L++L+P+ NK D+A+MLD+ +DY+K L+LQ+
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQ 390
Query: 191 ---KVLSM 195
+++SM
Sbjct: 391 ANFQIMSM 398
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
R + + D S+ + RRERI ER+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 227
Query: 192 VLS 194
+LS
Sbjct: 228 LLS 230
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 141 PHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG- 199
P S A ++RRERI+ER++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 202 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 261
Query: 200 APGAVAPLVTTDLPLSSVED 219
A G AP LS V+D
Sbjct: 262 AQGGKAP------ELSQVKD 275
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 42/47 (89%)
Query: 149 RRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
RR+RI E++RALQEL+P+ NK D+A+MLDE ++Y+K L+LQV+++SM
Sbjct: 12 RRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSM 58
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 47/60 (78%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAP 201
H ++ + RR+RI E+++ALQEL+P+ KTD+ +MLDE +DY+K L+LQ+++L M + AP
Sbjct: 144 HLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQMLVMGKGMAP 203
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQV 190
V +R +A H+ +ER RR++I +R++ LQ+LVP+ +KTD+A+MLDE+++Y+K L+ QV
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 268
Query: 191 KVLSMSRVGAP 201
+ MSR+ P
Sbjct: 269 SM--MSRMNMP 277
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P ++ R RA+RG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD V Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 183 VKFLRLQVKVL 193
+K L+ QV+ L
Sbjct: 362 IKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 124 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDY 182
P ++ R RA+RG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD V Y
Sbjct: 302 PDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTY 361
Query: 183 VKFLRLQVKVL 193
+K L+ QV+ L
Sbjct: 362 IKELQGQVEKL 372
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
+VRA+RG AT P SIAER RR RI+E++R LQELVP+++K T A MLD V+++K L+
Sbjct: 140 KVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQS 199
Query: 189 QVKVL 193
Q++ L
Sbjct: 200 QLQAL 204
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
+ DP S+A R RRERI+E+IR LQ LVP K D A+MLDE + YVKFL+ Q+++L
Sbjct: 105 SDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLL 160
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
R + + D S+ + RRERI ER+R LQ+LVP+ K D + ML+E V YVKFL+LQ+K
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKVDISTMLEEAVQYVKFLQLQIK 215
Query: 192 VLS 194
+LS
Sbjct: 216 LLS 218
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG 199
DP S+A R RRERI+E+IR LQ LVP K D A+MLDE + YVKFL+ Q++ L +
Sbjct: 34 DPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHP 93
Query: 200 APGAV-APLVTTDLPLSSVE 218
P V A L T D ++S +
Sbjct: 94 LPTDVTACLSTPDWAVTSTK 113
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 104 AIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQEL 163
A+K + + PV P +PR R R + DP S+ R RRERI+ER+R LQ L
Sbjct: 128 AMKEMMYRIAAMQPVDIDP-ATVKKPRRRNVR-ISEDPQSVVARHRRERISERVRVLQRL 185
Query: 164 VPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
VP K D A+MLDE + Y+KFL+ QV+ L
Sbjct: 186 VPGGTKMDTASMLDEAIRYIKFLKRQVQEL 215
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Query: 141 PHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVG- 199
P S A ++RRERI+ER++ LQ+LVP+ K D ML++ ++YVKFL+LQVKVL+
Sbjct: 224 PQSAAAKVRRERISERLKVLQDLVPNGTKVDLVTMLEKAINYVKFLQLQVKVLATDEFWP 283
Query: 200 APGAVAPLVTTDLPLSSVED 219
A G AP LS V+D
Sbjct: 284 AQGGKAP------ELSQVKD 297
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 52/64 (81%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
R R +R +A + H+++E+ RR RI E+++ALQ L+P+ +KTD+A+MLD+ ++Y+K L+LQ
Sbjct: 25 RPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQ 84
Query: 190 VKVL 193
V+++
Sbjct: 85 VQMI 88
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 123 HPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVD 181
P ++ R RA+RG AT P SIAER RR RI++R++ LQ+LVP+++K T+ + MLD V
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 207
Query: 182 YVKFLRLQVKVL 193
Y+K L+ QV+ L
Sbjct: 208 YIKELQGQVEKL 219
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>gi|125555439|gb|EAZ01045.1| hypothetical protein OsI_23077 [Oryza sativa Indica Group]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 16/102 (15%)
Query: 92 ASGSGKRFPEEHAIKNVFHGQPLPSPVPAAPHPPAMRPRVRARRGQATDPHSIAERLRRE 151
ASGS KR +P PSP+ + + + +R + S A + RRE
Sbjct: 166 ASGSQKR------------ARPPPSPLQGSE----LHEYSKKQRANNKETQSSAAKSRRE 209
Query: 152 RIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
RI+ER+RALQELVPS K D MLD + YVKF+++Q++VL
Sbjct: 210 RISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLRVL 251
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIV 180
RVRA+RG AT P SIAER+RR RI++RIR LQELVP+++K T+ A MLDE V
Sbjct: 191 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAV 242
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 140 DPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS 194
+P SI R RRERI ER++ LQ LVP+ K D + ML+E V YVKFL+LQ+++LS
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLS 276
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 131 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTD-RAAMLDEIVDYVKFLRLQ 189
VRARRG+A D HS+AER+RR++I+ +++ LQ LVP +KT + +LD I++Y+ L+ Q
Sbjct: 136 VRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQDQ 195
Query: 190 VKVL 193
VK L
Sbjct: 196 VKSL 199
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
G ATDP S+ R RRE+I ER++ LQ LVP+ K D MLDE + YVKFL+ QV++L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELL 58
>gi|52077404|dbj|BAD46515.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|125597317|gb|EAZ37097.1| hypothetical protein OsJ_21438 [Oryza sativa Japonica Group]
Length = 294
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 132 RARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVK 191
+ +R + S A + RRERI+ER+RALQELVPS K D MLD + YVKF+++Q++
Sbjct: 190 KKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISYVKFMQMQLR 249
Query: 192 VL 193
VL
Sbjct: 250 VL 251
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 136 GQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVL 193
G ATDP S+ R RRE+I ER+++LQ LVP+ K D MLDE + YVKFL+ QV++L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELL 58
>gi|255559498|ref|XP_002520769.1| DNA binding protein, putative [Ricinus communis]
gi|223540154|gb|EEF41731.1| DNA binding protein, putative [Ricinus communis]
Length = 340
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 12/118 (10%)
Query: 157 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRVGAPGAVAPLVTTDLPLSS 216
++ALQEL+P + + ++DEI+DYVK+L+LQ+K LS SR+ P
Sbjct: 231 LKALQELLPHSVEGSQIVVMDEIIDYVKYLQLQMKELSRSRLEGHLCSGPAHFL------ 284
Query: 217 VEDESGEGVRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAI 274
EG ++ N+ E +AKL++ N AA +FL+SK L +MP++LA +
Sbjct: 285 ------EGYHPYILHQQTMNEPLEETMAKLLKVNSSAATKFLESKGLFVMPMALADRL 336
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR RI E+++ALQ LVP+ +KTD+A+MLD+ ++Y+K L+LQV++LSM
Sbjct: 70 HNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM 123
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 47/54 (87%)
Query: 142 HSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSM 195
H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 147
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 131 VRAR-RGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQ 189
VR R R H+++E+ RR +I E+++ALQ+L+P+ NKTD+A+MLDE ++Y+K L+LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQ 156
Query: 190 VKVLSM 195
V+ L++
Sbjct: 157 VQALAV 162
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
++RA+RG AT P SIAER+RR RI+ER+R LQEL P ++K T A LD ++ +K L+
Sbjct: 335 KIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQK 394
Query: 189 QVKVLS 194
QVK L+
Sbjct: 395 QVKSLA 400
>gi|15236714|ref|NP_191923.1| transcription factor IND [Arabidopsis thaliana]
gi|209572742|sp|O81313.3|IND_ARATH RecName: Full=Transcription factor IND; AltName: Full=Basic
helix-loop-helix protein 40; Short=AtbHLH40; Short=bHLH
40; AltName: Full=Protein INDEHISCENT; AltName:
Full=Transcription factor EN 120; AltName: Full=bHLH
transcription factor bHLH040
gi|3193315|gb|AAC19297.1| contains similarity to transcriptional activator Ra [Arabidopsis
thaliana]
gi|7267099|emb|CAB80770.1| hypothetical protein [Arabidopsis thaliana]
gi|117958473|gb|ABK59672.1| At4g00120 [Arabidopsis thaliana]
gi|332656425|gb|AEE81825.1| transcription factor IND [Arabidopsis thaliana]
Length = 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 138 ATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS-MS 196
+ DP ++ R RRERI+E+IR L+ +VP K D A+MLDE + Y KFL+ QV++L S
Sbjct: 119 SDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHS 178
Query: 197 RVGAPGA 203
++GAP A
Sbjct: 179 QIGAPMA 185
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 130 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 188
RVRA+RG AT P SIAER RR RI+E++R LQ LVP+++K T A MLD VD+++ L+
Sbjct: 145 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQS 204
Query: 189 QVKVL 193
+++ L
Sbjct: 205 ELQAL 209
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 55/69 (79%)
Query: 133 ARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKV 192
+RR +A + H+++ER RRERI E+++ALQEL+P NKTD+A+MLDE ++Y+K L+LQ++V
Sbjct: 347 SRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406
Query: 193 LSMSRVGAP 201
+ M AP
Sbjct: 407 MWMGSGMAP 415
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,057,517,929
Number of Sequences: 23463169
Number of extensions: 232115718
Number of successful extensions: 796917
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 894
Number of HSP's that attempted gapping in prelim test: 792520
Number of HSP's gapped (non-prelim): 4163
length of query: 294
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 153
effective length of database: 9,050,888,538
effective search space: 1384785946314
effective search space used: 1384785946314
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)