BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022650
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus laevis GN=ergic3 PE=2 SV=1
Length = 389
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 174/324 (53%), Gaps = 42/324 (12%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ + +E
Sbjct: 60 VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEA 119
Query: 63 LTDLVEKEHEE-----HKHDHNK---------------DHKDDIDEKLHAFGFDEDAENM 102
+ K E+ D N+ + DD+ E G+ +
Sbjct: 120 DRHELGKSEEQVVFDPKTLDPNRCESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDS 179
Query: 103 IKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
I++ K + EGC+VYG L+V +VAGNFH + VH + I+ Q
Sbjct: 180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQ 239
Query: 145 MIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYIS 204
G N+N++H I LSFG YPG+ NPLDGT + +S F+Y++KIVPT Y +
Sbjct: 240 SF--GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVD 297
Query: 205 KDVLPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAV 262
+VL TNQFSVT + N D+ P V+ LY+LSP+ V E+ RSF H +T +CA+
Sbjct: 298 GEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAI 357
Query: 263 LGGTFALTGMLDRWMYRLLEALTK 286
+GG F + G++D +Y A+ K
Sbjct: 358 IGGVFTVAGLIDSLIYYSTRAIQK 381
>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Danio rerio GN=ergic3 PE=2 SV=1
Length = 383
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 170/316 (53%), Gaps = 32/316 (10%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + TE
Sbjct: 60 VDTSRGDKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPVTTEA 119
Query: 63 LTDLVEKEHE-------------EHKHDHNKDH------KDDIDEKLHAFGFDEDAENMI 103
+ KE E E + D DD+ E G+ + I
Sbjct: 120 EKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPDTI 179
Query: 104 KKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
++ K + EGC+VYG L+V +VAGNFH S +++V + G N
Sbjct: 180 EQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
+N++H I LSFG YPGI NPLD T S ++Y++KIVPT Y +V+ TNQ
Sbjct: 240 INMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQ 299
Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
FSVT + N D+ P V+ LY+LSP+ V E++RSF H +T +CA++GG F +
Sbjct: 300 FSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVA 359
Query: 271 GMLDRWMYRLLEALTK 286
G++D +Y A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375
>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1
Length = 384
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 174/318 (54%), Gaps = 35/318 (11%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ + +E
Sbjct: 60 VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEA 119
Query: 63 LTDLVEKEHEEH------KHDHNK---------------DHKDDIDEKLHAFGFDEDAEN 101
+ K EEH D N+ + DD+ E G+ +
Sbjct: 120 DRHELGKS-EEHVVFDPKSLDPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPD 178
Query: 102 MIKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
I++ K + EGC+VYG L+V +VAGNFH S +++V + G
Sbjct: 179 SIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 238
Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPT 210
N+N++H I LSFG YPG+ NPLDG+ +S F+Y++KIVPT Y + +VL T
Sbjct: 239 DNINMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRT 298
Query: 211 NQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFA 268
NQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F
Sbjct: 299 NQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFT 358
Query: 269 LTGMLDRWMYRLLEALTK 286
+ G++D +Y A+ K
Sbjct: 359 VAGLIDSLVYYSTRAIQK 376
>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Bos taurus GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 172/316 (54%), Gaps = 32/316 (10%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTE- 61
VD RG+ L I+IN+ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +E
Sbjct: 60 VDKSRGDKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSSEA 119
Query: 62 ------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAENMI 103
+ D ++ + E + + +D+ E G+ + I
Sbjct: 120 ERHELGKVEVKVFDPDSLDPDRCESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPDTI 179
Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
++ K + EGC+VYG L+V +VAGNFH S +++V + G N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQ
Sbjct: 240 INMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299
Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
FSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F +
Sbjct: 300 FSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 271 GMLDRWMYRLLEALTK 286
G++D +Y A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375
>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1
Length = 382
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 170/321 (52%), Gaps = 43/321 (13%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +E
Sbjct: 60 VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSSE- 118
Query: 63 LTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL------- 110
+ HE K + D +D + +AE N + V+ A
Sbjct: 119 -----AERHELGKVEVTVFGPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGAFK 173
Query: 111 -------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIF 147
+ EGC+VYG L+V +VAGNFH S +++V +
Sbjct: 174 NPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQS 233
Query: 148 GGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDV 207
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +V
Sbjct: 234 FGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEV 293
Query: 208 LPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 265
L TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 294 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGG 353
Query: 266 TFALTGMLDRWMYRLLEALTK 286
F + G++D +Y A+ K
Sbjct: 354 MFTVAGLIDSLIYHSARAIQK 374
>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Homo sapiens GN=ERGIC3 PE=1 SV=1
Length = 383
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 170/322 (52%), Gaps = 44/322 (13%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G + +E
Sbjct: 60 VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSE- 118
Query: 63 LTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL------- 110
+ HE K + D +D + +AE N + V+ A
Sbjct: 119 -----AERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAF 173
Query: 111 --------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMI 146
+ EGC+VYG L+V +VAGNFH S +++V +
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233
Query: 147 FGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKD 206
G N+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +
Sbjct: 234 SFGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGE 293
Query: 207 VLPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 264
VL TNQFSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++G
Sbjct: 294 VLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIG 353
Query: 265 GTFALTGMLDRWMYRLLEALTK 286
G F + G++D +Y A+ K
Sbjct: 354 GMFTVAGLIDSLIYHSARAIQK 375
>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Pongo abelii GN=ERGIC3 PE=2 SV=1
Length = 383
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 171/316 (54%), Gaps = 32/316 (10%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYG------- 55
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G
Sbjct: 60 VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEA 119
Query: 56 --HIIGTEYLT---------DLVEKEHEEHKHD-HNKDHKDDIDEKLHAFGFDEDAENMI 103
H +G +T D E + D + +D+ E G+ + I
Sbjct: 120 ERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPDTI 179
Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
++ K + EGC+VYG L+V +VAGNFH S +++V + G N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQ
Sbjct: 240 INMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299
Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
FSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F +
Sbjct: 300 FSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 271 GMLDRWMYRLLEALTK 286
G++D +Y A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375
>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3
OS=Mus musculus GN=Ergic3 PE=2 SV=1
Length = 383
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 172/316 (54%), Gaps = 32/316 (10%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYG------- 55
VD RG+ L I+I++ FP +PC LS+DA+D++G+ ++D++ N++K RL+ G
Sbjct: 60 VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSSEA 119
Query: 56 --HIIGTEYLT-----DLVEKEHEEHKHDHNKDHK-----DDIDEKLHAFGFDEDAENMI 103
H +G +T L E ++D K +D+ E G+ + I
Sbjct: 120 ERHELGKVEVTVFDPNSLDPNRCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTI 179
Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
++ K + EGC+VYG L+V +VAGNFH S +++V + G N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239
Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
+N++H I LSFG YPGI NPLD T S F+Y++K+VPT Y + +VL TNQ
Sbjct: 240 INMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299
Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
FSVT + N D+ P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F +
Sbjct: 300 FSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359
Query: 271 GMLDRWMYRLLEALTK 286
G++D +Y A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375
>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment
protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3
SV=1
Length = 383
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 175/323 (54%), Gaps = 45/323 (13%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
VD RGE L I++++TF LPC LS+DA+D+SG+H+ D+ NI+K RL+ G I
Sbjct: 59 VDTTRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI---- 114
Query: 63 LTDLVEKEHEEHKHDHNKDHKDDI---------------------DEKLHAF---GFDED 98
+ +E E +K + KD+ D + +E A+ G+ D
Sbjct: 115 IEAPPIREEEINKKESVKDNNDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWGLD 174
Query: 99 AENMIKKVKHAL------ESGEGCRVYGVLDVQRVAGNFHIS------VHGLNIYVAQMI 146
+ + ++ ++GEGC+VYG + V +VAGNFH + H ++++ Q
Sbjct: 175 PSGIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPF 234
Query: 147 FGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKD 206
G+ NVSH I+ LSFG +PGI NPLD + G F+Y++K+VPT Y ++ +
Sbjct: 235 KDGS--FNVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGN 292
Query: 207 VLPTNQFSVTEYFSTI---NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVL 263
+ TNQ+SVTE++ + E P ++F+YDLSPI + + E +SF +T +CA++
Sbjct: 293 RIATNQYSVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAII 352
Query: 264 GGTFALTGMLDRWMYRLLEALTK 286
GG F + G+ D ++Y + L K
Sbjct: 353 GGVFTVFGIFDSFIYYSTKNLQK 375
>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1
Length = 390
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 63/333 (18%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
V+ G+ + I+ N+TFP +PC +L+VD +D+SG+ + D+ + K RL+ G II +
Sbjct: 60 VNPSHGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVD- 118
Query: 63 LTDLVEKEHEEHKHDHNKDHKD-----------------------DIDEKLHAFGFDEDA 99
DL + D + D D K H D DA
Sbjct: 119 --DLDIGNQQSISDDGAAECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDA 176
Query: 100 ENMIK----KVKHALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
K K + + EGC + G L V R+AGNFHI+ VH Y+ +
Sbjct: 177 FKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINE 236
Query: 145 MIFGGAKNVNVSHVIHDLSFGPKY-PGIH--NPLDGTVRMLHDTSGTFKYYIKIVPTEYR 201
+ ++SH IH LSFGP +H NPLDGTV+ + ++Y+IK V ++
Sbjct: 237 LDLH-----DMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFM 291
Query: 202 YISKDVLP--TNQFSVTEYFSTIN-----------EFDRTWPAVYFLYDLSPITVTIKEE 248
+SK LP TN+++VT++ +I F P V+F +D+SP+ V ++
Sbjct: 292 PLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQV 351
Query: 249 R-RSFLHLITRLCAVLGGTFALTGMLDRWMYRL 280
R +F ++ + A+LGG L +DR Y +
Sbjct: 352 RGNTFGGFLSNVLALLGGCVTLASFVDRGYYEV 384
>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Danio rerio GN=ergic1 PE=2 SV=1
Length = 290
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 73/289 (25%)
Query: 4 DLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYL 63
D G + + +N++ P L CD++ +D D G+HEV GHI
Sbjct: 62 DKDSGGKIDVSLNISLPNLHCDLVGLDIQDEMGRHEV--------------GHI------ 101
Query: 64 TDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLD 123
EN +K L +G GCR G
Sbjct: 102 ------------------------------------ENSMKV---PLNNGHGCRFEGEFS 122
Query: 124 VQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYP-----GIHNPLDGT 178
+ +V GNFH+S H AQ ++ +++H+IH L+FG K G N L G
Sbjct: 123 INKVPGNFHVSTHSAT---AQ-----PQSPDMTHIIHKLAFGAKLQVQHVQGAFNALGGA 174
Query: 179 VRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EYFSTINEFDRTWPAVYFLYD 237
R+ + + Y +KIVPT Y + + Q++V + + + R PA++F YD
Sbjct: 175 DRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVANKEYVAYSHTGRIIPAIWFRYD 234
Query: 238 LSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 286
LSPITV E RR F IT +CA++GGTF + G++D ++ EA K
Sbjct: 235 LSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIIDSCIFTASEAWKK 283
>sp|Q969X5|ERGI1_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Homo sapiens GN=ERGIC1 PE=1 SV=1
Length = 290
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 105 KVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSF 164
+K L +G GCR G + +V GNFH+S H AQ +N +++HVIH LSF
Sbjct: 104 SMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHVIHKLSF 155
Query: 165 GPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EY 218
G G N L G R+ + + Y +KIVPT Y S + Q++V +
Sbjct: 156 GDTLQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKE 215
Query: 219 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 278
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD ++
Sbjct: 216 YVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIF 275
Query: 279 RLLEALTK 286
EA K
Sbjct: 276 TASEAWKK 283
>sp|Q9DC16|ERGI1_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Mus musculus GN=Ergic1 PE=1 SV=1
Length = 290
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 105 KVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSF 164
+K L +G GCR G + +V GNFH+S H AQ +N +++H IH LSF
Sbjct: 104 SMKIPLNNGAGCRFEGQFSINKVPGNFHVSTHSA---TAQ-----PQNPDMTHTIHKLSF 155
Query: 165 GPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EY 218
G G N L G R+ + + Y +KIVPT Y S + Q++V +
Sbjct: 156 GDTLQVQNVHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKE 215
Query: 219 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 278
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD ++
Sbjct: 216 YVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAIIGGTFTVAGILDSCIF 275
Query: 279 RLLEALTK 286
EA K
Sbjct: 276 TASEAWKK 283
>sp|Q5EHU7|ERGI2_GECJA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Gecko japonicus GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLN--SYGHIIGT 60
VD L I+I++T A+ C + D +D++ D +++ + S
Sbjct: 66 VDKDFSSKLRINIDITV-AMKCQYVGADVLDLAETMVASTDGLVYEPAIFDLSPQQKEWQ 124
Query: 61 EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
L + + EEH + + + F + + + + + + CR++G
Sbjct: 125 RMLQRIQSRLQEEHS----------LQDVIFKSTFKSASTALPPREDDSSQPPDACRIHG 174
Query: 121 VLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNP 174
L V +VAGNFHI+V + ++A ++ + N SH I LSFG PGI NP
Sbjct: 175 HLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGELVPGIINP 232
Query: 175 LDGTVRMLHDTSGTFKYYIKIVPTEYRY--ISKDVLPTNQFSVTEYFSTINEFDRT--WP 230
LDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 233 LDGTEKIALDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERVINHAAGSHGVS 289
Query: 231 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 290 GIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q4R5C3|ERGI2_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Macaca fascicularis GN=ERGIC2 PE=2 SV=1
Length = 377
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 111 ESGEGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSF 164
+S + CR++G L V +VAGNFHI+V + ++A ++ ++ N SH I LSF
Sbjct: 165 QSPDACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSF 222
Query: 165 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRY--ISKDVLPTNQFSVTEYFSTI 222
G P I NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE I
Sbjct: 223 GELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERII 279
Query: 223 NEFDRT--WPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
N + ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 280 NHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Mus musculus GN=Ergic2 PE=2 SV=1
Length = 377
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 114 EGCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPK 167
+ CR++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG
Sbjct: 168 DACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGEL 225
Query: 168 YPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRY--ISKDVLPTNQFSVTEYFSTINEF 225
PGI NPLDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN
Sbjct: 226 VPGIINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHA 282
Query: 226 DRT--WPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
+ ++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 283 AGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332
>sp|Q96RQ1|ERGI2_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Homo sapiens GN=ERGIC2 PE=1 SV=2
Length = 377
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLN--SYGHIIGT 60
VD L I+I++T A+ C + D +D++ D +++ + S
Sbjct: 66 VDKDFSSKLRINIDITV-AMKCQYVGADVLDLAETMVASADGLVYEPTVFDLSPQQKEWQ 124
Query: 61 EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
L + + EEH + + + F + + + + +S CR++G
Sbjct: 125 RMLQLIQSRLQEEH----------SLQDVIFKSAFKSTSTALPPREDDSSQSPNACRIHG 174
Query: 121 VLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNP 174
L V +VAGNFHI+V + ++A ++ ++ N SH I LSFG P I NP
Sbjct: 175 HLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHESYNFSHRIDHLSFGELVPAIINP 232
Query: 175 LDGTVRMLHDTSGTFKYYIKIVPTEYRY--ISKDVLPTNQFSVTEYFSTINEFDRT--WP 230
LDGT ++ D + F+Y+I +VPT+ IS D T+QFSVTE IN +
Sbjct: 233 LDGTEKIAIDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGSHGVS 289
Query: 231 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
++ YDLS + VT+ EE F RLC ++GG F+ TGML
Sbjct: 290 GIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGML 332
>sp|Q6NS19|ERGI1_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 1
OS=Xenopus laevis GN=ergic1 PE=2 SV=1
Length = 290
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 63 LTDLVEKE--HEEHKHDHNKDHKDDIDEKLHA---------FGFDEDAENMIKKVKH--- 108
LT + E +E + D +KD ID L+ G D E +V H
Sbjct: 44 LTGFIANEIVNELYVDDPDKDSGGKIDVTLNVTLPNLPCEVVGLDIQDEMGRHEVGHIDN 103
Query: 109 ----ALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSF 164
+ + GCR G+ + +V GNFH+S H +AQ N ++ H+IH LSF
Sbjct: 104 SMKIPINNAYGCRFEGLFSINKVPGNFHVSTHSA---IAQ-----PANPDMRHIIHKLSF 155
Query: 165 GPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-EY 218
G G N L G ++ + Y +KIVPT Y ++ + Q++V +
Sbjct: 156 GNTLQVDNIHGAFNALGGADKLASKALESHDYVLKIVPTVYEDLNGKQQFSYQYTVANKA 215
Query: 219 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 278
+ + R PA++F YDLSPITV E R+ IT +CA++GGTF + G+LD +++
Sbjct: 216 YVAYSHTGRVVPAIWFRYDLSPITVKYTERRQPMYRFITTVCAIIGGTFTVAGILDSFIF 275
Query: 279 RLLEALTK 286
EA K
Sbjct: 276 TASEAWKK 283
>sp|Q7T2D4|ERGI2_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 2
OS=Danio rerio GN=ergic2 PE=2 SV=1
Length = 376
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 115 GCRVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKY 168
CR++G L V +VAGNFHI+V + ++A ++ + N SH I LSFG +
Sbjct: 168 ACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--SHETYNFSHRIDHLSFGEEI 225
Query: 169 PGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRT 228
PGI NPLDGT ++ D + F+Y+I IVPT+ + K T+Q+SVTE IN +
Sbjct: 226 PGILNPLDGTEKVSADHNQMFQYFITIVPTKLQ-TYKVYADTHQYSVTERERVINHAAGS 284
Query: 229 --WPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
++ YD+S + V + E+ F + RLC ++GG F+ TGML
Sbjct: 285 HGVSGIFMKYDISSLMVKVTEQHMPFWQFLVRLCGIIGGIFSTTGML 331
>sp|O94283|ERV41_SCHPO ER-derived vesicles protein 41 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=erv41 PE=1 SV=1
Length = 333
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 32/269 (11%)
Query: 9 ETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVE 68
E + ++I++T A+PC L +D +D + DL ++ TE LT +E
Sbjct: 70 ELMDLNIDITI-AMPCSNLRIDVVDRTK----DL--------------VLATEALT--LE 108
Query: 69 KEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVA 128
+ + + +K+D L E KK SG CR+YG L V RV
Sbjct: 109 EAFIKDMPTSSTIYKNDRYAGLRW----ARTEKFRKKNNAEPGSGTACRIYGQLVVNRVN 164
Query: 129 GNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGT 188
G HI+ G + + F ++N +H I +LSFG YP + N LDG +D
Sbjct: 165 GQLHITAPGWGYGRSNIPF---HSLNFTHYIEELSFGEYYPALVNALDGHYGHANDHPFA 221
Query: 189 FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINE--FDRTWPAVYFLYDLSPITVTIK 246
F+YY+ ++PT Y+ S TNQ+S+TE S + + F P ++ YDL P+ V +
Sbjct: 222 FQYYLSVLPTSYKS-SFRSFETNQYSLTEN-SVVRQLGFGSLPPGIFIDYDLEPLAVRVV 279
Query: 247 EERRSFLHLITRLCAVLGGTFALTGMLDR 275
++ + + R+ A+ GG + ++R
Sbjct: 280 DKHPNVASTLLRILAISGGLITVASWIER 308
>sp|Q04651|ERV41_YEAST ER-derived vesicles protein ERV41 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV41 PE=1 SV=1
Length = 352
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 95 FDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVN 154
FDE N K L GC V+G + V RV+G I+ L YVA + +
Sbjct: 146 FDESDPN-----KAHLPEFNGCHVFGSIPVNRVSGELQITAKSLG-YVASRK-APLEELK 198
Query: 155 VSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTS-GTFKYYIKIVPTEYRYISKDVLPTNQF 213
+HVI++ SFG YP I NPLD T + D T+ YY +VPT ++ + +V TNQ+
Sbjct: 199 FNHVINEFSFGDFYPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKLGAEV-DTNQY 257
Query: 214 SVTEY---FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
SV +Y + + P ++F Y+ P+++ + + R SF+ + RL A+ +
Sbjct: 258 SVNDYRYLYKDVAAKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVAIC----SFL 313
Query: 271 GMLDRWMYRLLE 282
W++ LL+
Sbjct: 314 VYCASWIFTLLD 325
>sp|P39727|ERV46_YEAST ER-derived vesicles protein ERV46 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ERV46 PE=1 SV=2
Length = 415
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 77/357 (21%)
Query: 1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVD-LDTNIWKLRLNSYGHIIG 59
+ VD R L +++++TFP++PCD++++D +D SG+ ++D LD RLNS G +G
Sbjct: 57 LVVDRDRHAKLELNMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVG 116
Query: 60 --------------------TEYLTDLVEKEHEEHKHDHNKDHK---DDIDEKLHAF--- 93
Y + + + ++ K D D A+
Sbjct: 117 DATELHVGGNGDGTAPVNNDPNYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEA 176
Query: 94 ---GFDE------DAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHIS-----VHGLN 139
FD + E + K+ L EGCR+ G + R+ GN H + +
Sbjct: 177 GWAFFDGKNIEQCEREGYVSKINEHLN--EGCRIKGSAQINRIQGNLHFAPGKPYQNAYG 234
Query: 140 IYVAQMIFGGAKNVNVSHVIHDLSFGP-------------KYPGI---HNPLDGTVRMLH 183
+ ++ N+N +H+I+ LSFG ++ G +PLDG R +
Sbjct: 235 HFHDTSLYDKTSNLNFNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPLDG--RQVF 292
Query: 184 DTSGT----FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI-----NEFDRTW----- 229
T F Y+ KIVPT Y Y+ V+ T QFS T + + + T
Sbjct: 293 PDRNTHFHQFSYFAKIVPTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGG 352
Query: 230 -PAVYFLYDLSPITVTIKEER-RSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 284
P ++ +++SP+ V KE+ +++ I +GG A+ ++D+ Y+ ++
Sbjct: 353 IPGMFVFFEMSPLKVINKEQHGQTWSGFILNCITSIGGVLAVGTVMDKLFYKAQRSI 409
>sp|Q9T042|PDI54_ARATH Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana GN=PDIL5-4
PE=2 SV=1
Length = 480
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 91 HAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGA 150
H ++ ++N + +K A +G GCRV G + V++V GN +S F +
Sbjct: 270 HNLALEDKSDNSSRTLKKAPSTG-GCRVEGYMRVKKVPGNLMVSARS-----GSHSFDSS 323
Query: 151 KNVNVSHVIHDLSFGPK--------------YPGI-HNPLDGTVRMLHDTSG---TFKYY 192
+ +N+SHV++ LSFG + Y G+ H+ LDG + G T ++Y
Sbjct: 324 Q-MNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDGRSFINQRDLGPNVTIEHY 382
Query: 193 IKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSF 252
++IV TE + L + T + S + + P F ++LSP+ V I E +SF
Sbjct: 383 LQIVKTEVVKSNGQAL-VEAYEYTAHSSVAHSY--YLPVAKFHFELSPMQVLITENSKSF 439
Query: 253 LHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 286
H IT +CA++GG F + G+LD ++ + + K
Sbjct: 440 SHFITNVCAIIGGVFTVAGILDSILHHSMTLMKK 473
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
G+ L + N++FP+L C+ SVD D+ G + +++ I K ++S G+E+
Sbjct: 66 GDFLRLDFNISFPSLSCEFASVDVSDVLGTNRLNVTKTIRKFSIDSNMRPTGSEF 120
>sp|Q9LJU2|PDI53_ARATH Protein disulfide-isomerase 5-3 OS=Arabidopsis thaliana GN=PDIL5-3
PE=2 SV=1
Length = 483
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 59 GTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKL--------HAFGFDEDAENMIKKVKHAL 110
G++ D EHE + D + D + E L H D + + +K +K
Sbjct: 230 GSDLREDHGHHEHESYYGDRDTDSIVKMVEGLVAPIHPETHKVALDGKSNDTVKHLKKGP 289
Query: 111 ESGEGCRVYGVLDVQRVAGNFHISVH-GLNIYVAQMIFGGAKNVNVSHVIHDLSFG---- 165
+G GCRV G + V++V GN IS H G + + + +N+SHV+ SFG
Sbjct: 290 VTG-GCRVEGYVRVKKVPGNLVISAHSGAHSF-------DSSQMNMSHVVSHFSFGRMIS 341
Query: 166 PK----------YPGI-HNPLDGTVRMLHDTSG---TFKYYIKIVPTEY--RYISKDVLP 209
P+ Y G+ H+ LDG + G T ++Y++ V TE R ++
Sbjct: 342 PRLLTDMKRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSGQEHSL 401
Query: 210 TNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL 269
++ T + S + P F ++LSP+ + I E +SF H IT LCA++GG F +
Sbjct: 402 IEEYEYTAHSSVAQTY--YLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGVFTV 459
Query: 270 TGMLDRWMYRLLEALTK 286
G+LD + + + K
Sbjct: 460 AGILDSIFHNTVRLVKK 476
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV 67
G+ L I N++FPAL C+ SVD D+ G + +++ + K ++ + G E+ + L
Sbjct: 66 GDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFPIDPHLRSTGAEFHSGLA 125
Query: 68 EKEHEEHKHDHNKDHKDDIDEKL 90
HN +H ++ E+
Sbjct: 126 L---------HNINHGEETKEEF 139
>sp|Q69SA9|PDI54_ORYSJ Protein disulfide isomerase-like 5-4 OS=Oryza sativa subsp.
japonica GN=PDIL5-4 PE=2 SV=1
Length = 485
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 45/254 (17%)
Query: 69 KEHEEHKHDHNKDHKD---------------DIDEKLHAFGFDEDAENMIKKVKHALESG 113
KE++ H HDH + D +I + H ++ + + K
Sbjct: 234 KENQGH-HDHESYYGDRDTESLVAAMETYVANIPKDAHVLALEDKSNKTVDPAKRPAPLT 292
Query: 114 EGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG-------- 165
GCR+ G + V++V G+ IS F ++ +NVSH + SFG
Sbjct: 293 SGCRIEGFVRVKKVPGSVVISARS-----GSHSFDPSQ-INVSHYVTQFSFGKRLSAKMF 346
Query: 166 -------PKYPGIHNPLDGTVRMLH----DTSGTFKYYIKIVPTEYRYI--SKDVLPTNQ 212
P G H+ L G ++ + + T ++Y++IV TE + SK++ +
Sbjct: 347 NELKRLTPYVGGHHDRLAGQSYIVKHGDVNANVTIEHYLQIVKTELVTLRSSKELKLVEE 406
Query: 213 FSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGM 272
+ T + S ++ F P V F ++ SP+ V + E +SF H IT +CA++GG F + G+
Sbjct: 407 YEYTAHSSLVHSF--YVPVVKFHFEPSPMQVLVTELPKSFSHFITNVCAIIGGVFTVAGI 464
Query: 273 LDRWMYRLLEALTK 286
LD + L + K
Sbjct: 465 LDSIFHNTLRLVKK 478
Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 8 GETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV 67
GE L I N++FPAL C+ SVD D+ G + +++ + K ++ G+E+ +
Sbjct: 66 GEFLRIDFNLSFPALSCEFASVDVSDVLGTNRLNITKTVRKYSIDRNLVPTGSEFHPGPI 125
Query: 68 EKEHEEHKHDHNKDHKDDIDEKLHAFGFD 96
+H D ++H DD L + FD
Sbjct: 126 PTV-SKHGDDVEENH-DDGSVPLSSRNFD 152
>sp|Q5KYR3|IOLC_GEOKA 5-dehydro-2-deoxygluconokinase OS=Geobacillus kaustophilus (strain
HTA426) GN=iolC PE=3 SV=1
Length = 335
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Query: 152 NVNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 208
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 84 GIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIDEDYIRRAKCLL 143
Query: 209 PTNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVL 263
+ S F ++ R V F D P T KEE + +L C V+
Sbjct: 144 ISGTALAKSPSREAVFLALDYARRHGTVVVFDLDYRPYTWQSKEETAIYYNLAAEKCDVI 203
Query: 264 GGTFALTGMLDRW 276
GT M++R+
Sbjct: 204 IGTREEFDMMERF 216
>sp|A4IPB3|IOLC_GEOTN 5-dehydro-2-deoxygluconokinase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=iolC PE=3 SV=1
Length = 337
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 8/133 (6%)
Query: 152 NVNVSHVIHDLS---FGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 208
++ SHVI D S G + I +P D ++ M D K + +Y +K +L
Sbjct: 84 GIDTSHVITDKSGSVTGLAFTEIKSPTDCSILMYRDNVADLKLEPNDIHEDYIRQAKCLL 143
Query: 209 PTNQF-----SVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVL 263
+ S F + R V+F D P T KEE + +L C V+
Sbjct: 144 ISGTALAKSPSREAVFLALEYARRHGVVVFFDLDYRPYTWQSKEETAIYYNLAAEKCDVI 203
Query: 264 GGTFALTGMLDRW 276
GT M++++
Sbjct: 204 IGTREEFDMMEQF 216
>sp|Q123B6|SYR_POLSJ Arginine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=argS PE=3 SV=1
Length = 561
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 25 DVLSVDAIDMSG----KHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNK 80
DV +DAI +HE DLD + +R ++Y ++ + Y + V+ ++ K D K
Sbjct: 229 DVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNY-YLESSLYSSGRVDSAVQKLK-DAGK 286
Query: 81 DHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNI 140
++ D L + + +D + ++KK G+G Y V DV +H+
Sbjct: 287 TYEQDGALWLKSTDYGDDKDRVMKK-------GDGSYTYFVPDVA-----YHL------- 327
Query: 141 YVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR-----MLHDTSGTFKY--YI 193
A+ G +K +N+ + H + G+ G + +LH ++ +
Sbjct: 328 --AKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEV 385
Query: 194 KIVPTEYRYIS-KDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSF 252
KI Y++ +D++ +F + P +++D+ E +
Sbjct: 386 KISKRAGSYVTLRDLIEWTSADAVRFFLLSRK-----PDTEYVFDIDLALAKNNENPVYY 440
Query: 253 LHLI-TRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVL 293
+ R+C++LG A G + L AL P A++++
Sbjct: 441 VQYAHARICSILGTWAAQGGDASQLKSVDLSALDGPQAQALM 482
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,139,094
Number of Sequences: 539616
Number of extensions: 5443627
Number of successful extensions: 14236
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 14070
Number of HSP's gapped (non-prelim): 91
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)