Query 022652
Match_columns 294
No_of_seqs 269 out of 3202
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 08:55:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 3.1E-30 1.1E-34 227.2 27.4 224 55-279 20-248 (407)
2 3alj_A 2-methyl-3-hydroxypyrid 100.0 2.7E-26 9.4E-31 200.1 25.6 212 57-277 10-230 (379)
3 2x3n_A Probable FAD-dependent 99.9 1.7E-26 5.9E-31 202.7 21.0 214 57-275 5-228 (399)
4 2vou_A 2,6-dihydroxypyridine h 99.9 5.2E-25 1.8E-29 193.2 27.1 210 57-277 4-227 (397)
5 2qa2_A CABE, polyketide oxygen 99.9 7.6E-25 2.6E-29 197.1 27.7 209 57-276 11-226 (499)
6 2qa1_A PGAE, polyketide oxygen 99.9 7.7E-25 2.6E-29 197.1 27.3 209 56-275 9-224 (500)
7 2xdo_A TETX2 protein; tetracyc 99.9 6.5E-25 2.2E-29 192.6 24.0 220 56-278 24-252 (398)
8 3c96_A Flavin-containing monoo 99.9 4.4E-24 1.5E-28 188.1 26.0 206 57-266 3-223 (410)
9 2r0c_A REBC; flavin adenine di 99.9 9.7E-24 3.3E-28 192.2 25.7 212 56-269 24-257 (549)
10 3oz2_A Digeranylgeranylglycero 99.9 4.8E-24 1.6E-28 186.5 22.8 220 57-280 3-232 (397)
11 3ihg_A RDME; flavoenzyme, anth 99.9 2.6E-24 8.8E-29 195.7 21.2 217 57-274 4-247 (535)
12 3cgv_A Geranylgeranyl reductas 99.9 7.2E-24 2.5E-28 185.7 22.9 216 58-279 4-231 (397)
13 1k0i_A P-hydroxybenzoate hydro 99.9 3.9E-24 1.3E-28 187.4 19.9 217 58-278 2-228 (394)
14 3nix_A Flavoprotein/dehydrogen 99.9 1.2E-23 4.3E-28 185.7 21.7 218 57-277 4-235 (421)
15 1pn0_A Phenol 2-monooxygenase; 99.9 1.4E-23 4.8E-28 194.6 22.0 219 57-277 7-295 (665)
16 4hb9_A Similarities with proba 99.9 9.8E-24 3.4E-28 185.6 19.4 181 59-240 2-193 (412)
17 3e1t_A Halogenase; flavoprotei 99.9 1.6E-23 5.6E-28 189.3 21.0 220 57-277 6-238 (512)
18 2dkh_A 3-hydroxybenzoate hydro 99.9 3.6E-23 1.2E-27 191.5 22.3 218 57-276 31-275 (639)
19 3fmw_A Oxygenase; mithramycin, 99.9 3.4E-24 1.2E-28 195.4 15.1 213 57-276 48-269 (570)
20 3i3l_A Alkylhalidase CMLS; fla 99.9 1.3E-22 4.5E-27 185.3 23.3 220 57-277 22-254 (591)
21 3atr_A Conserved archaeal prot 99.9 2.7E-22 9.1E-27 178.8 22.1 212 57-278 5-236 (453)
22 2pyx_A Tryptophan halogenase; 99.8 7.7E-19 2.6E-23 159.3 26.9 211 57-269 6-294 (526)
23 2gmh_A Electron transfer flavo 99.8 1E-18 3.5E-23 160.0 27.1 216 56-278 33-295 (584)
24 2weu_A Tryptophan 5-halogenase 99.8 6.6E-19 2.2E-23 159.3 24.5 216 58-276 2-296 (511)
25 2aqj_A Tryptophan halogenase, 99.8 2.4E-18 8.2E-23 156.5 25.1 216 57-275 4-288 (538)
26 2e4g_A Tryptophan halogenase; 99.8 9E-18 3.1E-22 152.9 25.4 216 57-275 24-318 (550)
27 3c4a_A Probable tryptophan hyd 99.8 3.5E-19 1.2E-23 155.2 12.4 193 59-275 1-205 (381)
28 1yvv_A Amine oxidase, flavin-c 99.7 1.2E-15 4.1E-20 130.4 20.0 150 58-219 2-167 (336)
29 2bry_A NEDD9 interacting prote 99.7 4.7E-17 1.6E-21 146.3 11.4 141 56-223 90-239 (497)
30 2gag_B Heterotetrameric sarcos 99.7 6.4E-16 2.2E-20 135.5 17.8 116 155-276 170-288 (405)
31 3dme_A Conserved exported prot 99.7 3.7E-16 1.2E-20 135.1 13.5 69 155-223 146-220 (369)
32 3nyc_A D-arginine dehydrogenas 99.7 5E-16 1.7E-20 135.0 13.2 68 154-223 149-219 (381)
33 3ps9_A TRNA 5-methylaminomethy 99.7 2.4E-15 8.3E-20 140.2 18.2 164 57-222 271-482 (676)
34 3pvc_A TRNA 5-methylaminomethy 99.7 5.1E-15 1.8E-19 138.2 18.7 113 154-275 407-525 (689)
35 3v76_A Flavoprotein; structura 99.6 1.7E-15 6E-20 132.9 14.3 141 56-214 25-187 (417)
36 3da1_A Glycerol-3-phosphate de 99.6 1.4E-15 4.9E-20 138.5 13.9 69 155-223 166-242 (561)
37 1y56_B Sarcosine oxidase; dehy 99.6 4.4E-15 1.5E-19 129.2 16.4 68 155-223 145-215 (382)
38 2i0z_A NAD(FAD)-utilizing dehy 99.6 2.3E-15 7.9E-20 133.7 14.8 164 56-224 24-212 (447)
39 2oln_A NIKD protein; flavoprot 99.6 1.4E-14 4.7E-19 126.8 19.5 167 58-226 4-221 (397)
40 1ryi_A Glycine oxidase; flavop 99.6 1.1E-14 3.6E-19 126.8 18.5 110 155-273 160-272 (382)
41 3dje_A Fructosyl amine: oxygen 99.6 1.7E-15 5.7E-20 134.4 12.4 62 154-215 156-222 (438)
42 2gf3_A MSOX, monomeric sarcosi 99.6 1.3E-14 4.5E-19 126.4 17.5 164 57-222 2-214 (389)
43 1rp0_A ARA6, thiazole biosynth 99.6 2.8E-15 9.7E-20 125.2 12.6 135 56-219 37-196 (284)
44 3nlc_A Uncharacterized protein 99.6 7E-15 2.4E-19 132.7 14.9 141 57-223 106-290 (549)
45 3jsk_A Cypbp37 protein; octame 99.6 4E-15 1.4E-19 125.8 11.9 134 57-219 78-256 (344)
46 3ces_A MNMG, tRNA uridine 5-ca 99.6 1.1E-14 3.7E-19 132.6 13.5 153 57-221 27-188 (651)
47 1qo8_A Flavocytochrome C3 fuma 99.6 2.5E-15 8.4E-20 137.3 9.2 164 55-220 118-318 (566)
48 2uzz_A N-methyl-L-tryptophan o 99.6 2.9E-14 9.8E-19 123.5 15.4 156 58-215 2-205 (372)
49 2zxi_A TRNA uridine 5-carboxym 99.6 2.3E-14 7.8E-19 130.0 14.7 150 57-218 26-184 (637)
50 2ywl_A Thioredoxin reductase r 99.6 1.9E-14 6.3E-19 111.9 12.3 116 59-223 2-119 (180)
51 2cul_A Glucose-inhibited divis 99.6 1.4E-14 4.8E-19 117.3 11.7 124 57-222 2-133 (232)
52 2gqf_A Hypothetical protein HI 99.6 2.6E-14 9E-19 124.9 13.4 139 58-214 4-168 (401)
53 3axb_A Putative oxidoreductase 99.6 2.6E-14 8.8E-19 127.1 13.2 73 154-227 176-268 (448)
54 1y0p_A Fumarate reductase flav 99.6 8E-15 2.8E-19 134.1 10.0 163 56-220 124-323 (571)
55 2qcu_A Aerobic glycerol-3-phos 99.6 4.7E-13 1.6E-17 120.5 21.3 111 154-272 144-269 (501)
56 3c4n_A Uncharacterized protein 99.5 2.2E-14 7.4E-19 125.9 10.9 166 57-225 35-249 (405)
57 2gjc_A Thiazole biosynthetic e 99.5 7.3E-14 2.5E-18 117.5 12.8 136 56-220 63-245 (326)
58 3cp8_A TRNA uridine 5-carboxym 99.5 5.7E-14 2E-18 127.8 12.4 152 57-216 20-176 (641)
59 4a9w_A Monooxygenase; baeyer-v 99.5 9.3E-14 3.2E-18 119.4 11.9 128 58-215 3-133 (357)
60 3ab1_A Ferredoxin--NADP reduct 99.5 3.4E-14 1.2E-18 122.6 9.1 121 57-218 13-135 (360)
61 2zbw_A Thioredoxin reductase; 99.5 6.3E-14 2.2E-18 119.6 9.4 122 57-220 4-127 (335)
62 1pj5_A N,N-dimethylglycine oxi 99.5 3.3E-13 1.1E-17 128.6 15.1 74 154-228 146-222 (830)
63 3gwf_A Cyclohexanone monooxyge 99.5 1.4E-13 4.8E-18 124.7 11.9 169 57-257 7-188 (540)
64 3ihm_A Styrene monooxygenase A 99.5 2.9E-13 9.9E-18 119.6 13.5 143 57-219 21-172 (430)
65 3lzw_A Ferredoxin--NADP reduct 99.5 8.1E-14 2.8E-18 118.6 9.5 117 57-215 6-124 (332)
66 2rgh_A Alpha-glycerophosphate 99.5 4E-12 1.4E-16 116.0 20.5 69 155-223 184-260 (571)
67 4ap3_A Steroid monooxygenase; 99.5 1.4E-13 4.9E-18 124.9 10.8 169 57-257 20-201 (549)
68 4fk1_A Putative thioredoxin re 99.5 3.5E-13 1.2E-17 113.6 12.3 112 56-214 4-117 (304)
69 4at0_A 3-ketosteroid-delta4-5a 99.5 5.7E-14 1.9E-18 126.8 7.8 57 160-216 203-266 (510)
70 1w4x_A Phenylacetone monooxyge 99.5 2E-13 7E-18 124.0 10.7 134 57-216 15-156 (542)
71 4dgk_A Phytoene dehydrogenase; 99.5 7.3E-13 2.5E-17 119.3 14.0 61 160-220 222-284 (501)
72 3i6d_A Protoporphyrinogen oxid 99.4 5.6E-13 1.9E-17 118.9 12.4 56 160-216 236-291 (470)
73 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 7.2E-13 2.5E-17 113.5 12.5 134 59-213 2-164 (342)
74 3uox_A Otemo; baeyer-villiger 99.4 4.2E-13 1.4E-17 121.7 11.3 136 57-215 8-148 (545)
75 3fbs_A Oxidoreductase; structu 99.4 9.4E-13 3.2E-17 110.2 11.2 110 58-216 2-114 (297)
76 2gv8_A Monooxygenase; FMO, FAD 99.4 8.9E-13 3.1E-17 117.1 11.5 150 57-215 5-178 (447)
77 3f8d_A Thioredoxin reductase ( 99.4 2E-12 7E-17 109.4 12.5 111 57-215 14-126 (323)
78 2q0l_A TRXR, thioredoxin reduc 99.4 1.7E-12 5.7E-17 109.6 11.0 112 59-216 2-116 (311)
79 1d4d_A Flavocytochrome C fumar 99.4 2.7E-12 9.2E-17 117.3 12.9 164 57-220 125-323 (572)
80 3ka7_A Oxidoreductase; structu 99.4 6.5E-12 2.2E-16 110.7 14.1 57 159-216 196-254 (425)
81 2q7v_A Thioredoxin reductase; 99.4 3.5E-12 1.2E-16 108.3 11.4 114 57-215 7-124 (325)
82 2xve_A Flavin-containing monoo 99.4 3.5E-12 1.2E-16 113.7 11.7 149 59-216 3-168 (464)
83 3itj_A Thioredoxin reductase 1 99.4 3E-12 1E-16 109.1 10.5 117 56-215 20-143 (338)
84 1vdc_A NTR, NADPH dependent th 99.4 1.9E-12 6.6E-17 110.3 9.1 114 57-216 7-126 (333)
85 2ivd_A PPO, PPOX, protoporphyr 99.3 9.3E-12 3.2E-16 111.4 12.7 64 56-119 14-92 (478)
86 1kf6_A Fumarate reductase flav 99.3 5.1E-12 1.7E-16 115.9 11.2 163 57-220 4-203 (602)
87 3k7m_X 6-hydroxy-L-nicotine ox 99.3 6.3E-13 2.2E-17 117.4 4.5 51 160-213 208-258 (431)
88 3nks_A Protoporphyrinogen oxid 99.3 4.6E-12 1.6E-16 113.4 9.9 55 160-215 235-291 (477)
89 1c0p_A D-amino acid oxidase; a 99.3 6.2E-12 2.1E-16 108.5 10.1 36 57-92 5-40 (363)
90 3nrn_A Uncharacterized protein 99.3 1.3E-11 4.3E-16 108.8 12.1 58 160-221 190-249 (421)
91 2h88_A Succinate dehydrogenase 99.3 1.4E-11 4.8E-16 113.0 12.8 159 57-216 17-219 (621)
92 2wdq_A Succinate dehydrogenase 99.3 5.9E-12 2E-16 115.2 10.3 159 57-216 6-208 (588)
93 3cty_A Thioredoxin reductase; 99.3 7E-12 2.4E-16 106.2 9.9 111 57-215 15-127 (319)
94 3lov_A Protoporphyrinogen oxid 99.3 1.2E-11 4.3E-16 110.5 11.9 55 160-216 237-291 (475)
95 3d1c_A Flavin-containing putat 99.3 1.5E-11 5.2E-16 106.2 12.0 134 58-215 4-144 (369)
96 1chu_A Protein (L-aspartate ox 99.3 1.5E-11 5.2E-16 111.4 11.8 36 57-93 7-42 (540)
97 1fl2_A Alkyl hydroperoxide red 99.3 1.5E-11 5E-16 103.8 11.0 112 58-215 1-116 (310)
98 4a5l_A Thioredoxin reductase; 99.3 2.4E-11 8.2E-16 102.6 12.1 115 57-214 3-121 (314)
99 2e5v_A L-aspartate oxidase; ar 99.3 1.8E-11 6E-16 109.3 11.7 60 158-218 118-180 (472)
100 1s3e_A Amine oxidase [flavin-c 99.3 5.6E-11 1.9E-15 107.5 15.1 54 160-215 216-269 (520)
101 2a87_A TRXR, TR, thioredoxin r 99.3 1.2E-11 4E-16 105.6 10.1 112 57-215 13-127 (335)
102 1trb_A Thioredoxin reductase; 99.3 1.3E-11 4.4E-16 104.5 10.2 112 57-215 4-117 (320)
103 4gcm_A TRXR, thioredoxin reduc 99.3 2E-11 6.8E-16 103.1 11.0 35 57-91 5-39 (312)
104 3p1w_A Rabgdi protein; GDI RAB 99.3 6.2E-10 2.1E-14 98.5 20.4 54 160-213 257-313 (475)
105 1rsg_A FMS1 protein; FAD bindi 99.3 2.8E-11 9.6E-16 109.4 12.1 58 158-215 201-258 (516)
106 4gde_A UDP-galactopyranose mut 99.3 1.6E-11 5.5E-16 110.8 10.4 52 158-212 221-274 (513)
107 2vvm_A Monoamine oxidase N; FA 99.3 3.8E-11 1.3E-15 107.9 12.4 55 160-215 256-313 (495)
108 3s5w_A L-ornithine 5-monooxyge 99.3 3.1E-11 1E-15 107.6 11.6 146 57-215 29-193 (463)
109 2bcg_G Secretory pathway GDP d 99.3 5.4E-10 1.8E-14 99.3 19.5 55 160-215 243-301 (453)
110 1hyu_A AHPF, alkyl hydroperoxi 99.2 3.7E-11 1.2E-15 108.6 10.8 115 55-215 209-327 (521)
111 1jnr_A Adenylylsulfate reducta 99.2 5E-11 1.7E-15 110.3 11.9 152 57-216 21-220 (643)
112 2bs2_A Quinol-fumarate reducta 99.2 3.7E-11 1.3E-15 111.0 9.8 58 159-216 158-222 (660)
113 3g3e_A D-amino-acid oxidase; F 99.2 2.3E-11 8E-16 104.4 7.7 49 154-215 137-187 (351)
114 3r9u_A Thioredoxin reductase; 99.2 1.6E-10 5.4E-15 97.4 12.3 110 57-214 3-118 (315)
115 3gyx_A Adenylylsulfate reducta 99.2 6.3E-11 2.1E-15 109.4 10.0 61 156-216 163-235 (662)
116 2b9w_A Putative aminooxidase; 99.2 7.3E-10 2.5E-14 97.5 14.9 38 57-94 5-43 (424)
117 2yg5_A Putrescine oxidase; oxi 99.1 8.4E-10 2.9E-14 98.0 15.2 38 57-94 4-41 (453)
118 2jae_A L-amino acid oxidase; o 99.1 3.5E-10 1.2E-14 101.5 12.3 54 159-213 239-295 (489)
119 4gut_A Lysine-specific histone 99.1 6.9E-10 2.4E-14 104.2 13.9 50 160-213 535-584 (776)
120 3klj_A NAD(FAD)-dependent dehy 99.1 5.4E-10 1.8E-14 97.1 11.6 109 57-214 8-116 (385)
121 1q1r_A Putidaredoxin reductase 99.1 2.3E-10 7.8E-15 101.0 9.4 111 57-215 3-115 (431)
122 1dxl_A Dihydrolipoamide dehydr 99.1 3E-10 1E-14 101.4 9.9 37 57-93 5-41 (470)
123 3kkj_A Amine oxidase, flavin-c 99.1 1.4E-10 4.9E-15 95.5 6.9 37 58-94 2-38 (336)
124 3lxd_A FAD-dependent pyridine 99.1 1.4E-10 4.7E-15 102.0 6.4 110 57-214 8-119 (415)
125 1d5t_A Guanine nucleotide diss 99.1 1.1E-08 3.8E-13 90.3 18.4 55 160-215 235-291 (433)
126 2gqw_A Ferredoxin reductase; f 99.1 4.5E-10 1.5E-14 98.4 9.2 107 57-215 6-114 (408)
127 3kd9_A Coenzyme A disulfide re 99.1 2.7E-10 9.4E-15 101.1 7.9 105 58-214 3-114 (449)
128 3sx6_A Sulfide-quinone reducta 99.0 1.4E-10 4.8E-15 102.6 5.4 108 58-216 4-114 (437)
129 1v59_A Dihydrolipoamide dehydr 99.0 2.4E-10 8.4E-15 102.2 7.1 37 57-93 4-40 (478)
130 3oc4_A Oxidoreductase, pyridin 99.0 9E-10 3.1E-14 97.8 10.2 111 59-215 3-116 (452)
131 3ef6_A Toluene 1,2-dioxygenase 99.0 1.1E-09 3.9E-14 95.9 10.6 107 59-214 3-111 (410)
132 2v3a_A Rubredoxin reductase; a 99.0 1.7E-09 5.9E-14 93.9 11.7 100 58-215 145-244 (384)
133 1sez_A Protoporphyrinogen oxid 99.0 8.9E-09 3E-13 92.6 16.6 62 57-118 12-88 (504)
134 3h8l_A NADH oxidase; membrane 99.0 2.9E-10 9.8E-15 99.7 6.4 35 59-93 2-39 (409)
135 1ges_A Glutathione reductase; 99.0 1.8E-09 6E-14 95.9 11.4 101 58-216 167-267 (450)
136 3iwa_A FAD-dependent pyridine 99.0 7.5E-10 2.6E-14 98.9 9.1 36 58-93 3-40 (472)
137 2yqu_A 2-oxoglutarate dehydrog 99.0 1.7E-09 5.9E-14 96.1 11.2 100 58-216 167-266 (455)
138 1ojt_A Surface protein; redox- 99.0 1.1E-10 3.7E-15 104.6 3.5 37 57-93 5-41 (482)
139 3lxd_A FAD-dependent pyridine 99.0 6.4E-09 2.2E-13 91.3 14.6 99 58-215 152-252 (415)
140 3fg2_P Putative rubredoxin red 99.0 7.2E-09 2.5E-13 90.7 14.3 98 58-214 142-241 (404)
141 3fg2_P Putative rubredoxin red 99.0 4.9E-10 1.7E-14 98.1 6.5 106 59-213 2-109 (404)
142 2a8x_A Dihydrolipoyl dehydroge 99.0 4.4E-10 1.5E-14 100.2 6.1 141 58-216 3-148 (464)
143 3ics_A Coenzyme A-disulfide re 99.0 2E-09 6.8E-14 98.8 10.5 113 57-214 35-152 (588)
144 3h28_A Sulfide-quinone reducta 99.0 2.6E-10 8.9E-15 100.7 4.1 107 58-215 2-110 (430)
145 1zmd_A Dihydrolipoyl dehydroge 99.0 1.6E-09 5.5E-14 96.8 9.0 37 57-93 5-41 (474)
146 3l8k_A Dihydrolipoyl dehydroge 99.0 1.2E-09 4.1E-14 97.4 8.1 36 58-93 4-39 (466)
147 3hyw_A Sulfide-quinone reducta 99.0 2.9E-09 1E-13 93.9 10.5 105 59-214 3-109 (430)
148 3cgb_A Pyridine nucleotide-dis 98.9 1.1E-09 3.7E-14 98.1 7.4 113 58-215 36-153 (480)
149 2bc0_A NADH oxidase; flavoprot 98.9 9.4E-10 3.2E-14 98.7 6.9 113 57-215 34-150 (490)
150 2qae_A Lipoamide, dihydrolipoy 98.9 1.8E-09 6.1E-14 96.4 8.5 36 58-93 2-37 (468)
151 1ebd_A E3BD, dihydrolipoamide 98.9 1.8E-09 6.2E-14 96.0 8.5 33 58-90 3-35 (455)
152 2r9z_A Glutathione amide reduc 98.9 5.5E-09 1.9E-13 93.0 11.4 99 58-215 166-265 (463)
153 3ntd_A FAD-dependent pyridine 98.9 4.3E-09 1.5E-13 96.1 10.9 111 59-214 2-117 (565)
154 3urh_A Dihydrolipoyl dehydroge 98.9 9.6E-10 3.3E-14 98.7 6.4 37 57-93 24-60 (491)
155 2eq6_A Pyruvate dehydrogenase 98.9 5.6E-09 1.9E-13 93.0 10.9 100 58-216 169-273 (464)
156 1xhc_A NADH oxidase /nitrite r 98.9 5.3E-09 1.8E-13 90.3 10.2 106 58-214 8-113 (367)
157 3ef6_A Toluene 1,2-dioxygenase 98.9 8.2E-09 2.8E-13 90.5 11.4 101 57-215 142-242 (410)
158 1onf_A GR, grase, glutathione 98.9 9E-09 3.1E-13 92.6 11.9 101 58-216 176-277 (500)
159 3qfa_A Thioredoxin reductase 1 98.9 4.5E-09 1.5E-13 94.9 9.9 36 56-91 30-65 (519)
160 1y56_A Hypothetical protein PH 98.9 1.9E-09 6.6E-14 96.7 7.3 110 58-215 108-220 (493)
161 4b63_A L-ornithine N5 monooxyg 98.9 8.9E-09 3E-13 92.5 11.6 58 156-213 142-213 (501)
162 2wpf_A Trypanothione reductase 98.9 1.1E-08 3.8E-13 91.8 12.1 100 58-215 191-293 (495)
163 1m6i_A Programmed cell death p 98.9 2.4E-09 8.3E-14 96.0 7.7 132 57-214 10-144 (493)
164 1b37_A Protein (polyamine oxid 98.9 3.7E-08 1.3E-12 87.9 15.3 55 160-215 207-271 (472)
165 2hqm_A GR, grase, glutathione 98.9 1.1E-08 3.7E-13 91.5 11.8 100 58-215 185-286 (479)
166 2cdu_A NADPH oxidase; flavoenz 98.9 5.7E-10 1.9E-14 99.1 3.3 112 59-215 1-118 (452)
167 1fec_A Trypanothione reductase 98.9 8.9E-09 3.1E-13 92.3 11.1 100 58-215 187-289 (490)
168 1zk7_A HGII, reductase, mercur 98.9 1.6E-08 5.6E-13 90.1 12.4 35 57-91 3-37 (467)
169 1q1r_A Putidaredoxin reductase 98.9 1.4E-08 4.9E-13 89.5 11.9 100 58-214 149-250 (431)
170 1nhp_A NADH peroxidase; oxidor 98.9 1.2E-08 4E-13 90.5 10.9 111 59-215 1-116 (447)
171 2yqu_A 2-oxoglutarate dehydrog 98.9 8.7E-10 3E-14 98.0 3.6 36 58-93 1-36 (455)
172 1nhp_A NADH peroxidase; oxidor 98.9 1.3E-08 4.6E-13 90.1 10.8 98 57-215 148-247 (447)
173 3lad_A Dihydrolipoamide dehydr 98.8 2.4E-09 8.3E-14 95.7 5.9 37 57-93 2-38 (476)
174 3dgz_A Thioredoxin reductase 2 98.8 1E-08 3.5E-13 91.9 9.8 34 57-90 5-38 (488)
175 2v3a_A Rubredoxin reductase; a 98.8 1.3E-08 4.3E-13 88.5 10.0 110 57-215 3-114 (384)
176 1xdi_A RV3303C-LPDA; reductase 98.8 6.7E-09 2.3E-13 93.4 8.4 34 58-91 2-38 (499)
177 1ebd_A E3BD, dihydrolipoamide 98.8 1.5E-08 5.2E-13 90.0 10.6 99 58-215 170-271 (455)
178 2gqw_A Ferredoxin reductase; f 98.8 2.8E-08 9.5E-13 87.0 11.7 95 58-214 145-239 (408)
179 3o0h_A Glutathione reductase; 98.8 1.3E-08 4.3E-13 91.2 9.8 34 57-90 25-58 (484)
180 1xdi_A RV3303C-LPDA; reductase 98.8 2.5E-08 8.6E-13 89.6 11.7 100 58-216 182-281 (499)
181 1mo9_A ORF3; nucleotide bindin 98.8 2E-08 7E-13 90.7 11.1 100 59-216 215-318 (523)
182 3vrd_B FCCB subunit, flavocyto 98.8 2.1E-08 7.1E-13 87.6 10.8 105 59-215 3-109 (401)
183 1ojt_A Surface protein; redox- 98.8 1.6E-08 5.5E-13 90.5 10.0 99 58-215 185-287 (482)
184 3g5s_A Methylenetetrahydrofola 98.8 2.2E-08 7.5E-13 85.5 10.1 34 59-92 2-35 (443)
185 3o0h_A Glutathione reductase; 98.8 3.4E-08 1.1E-12 88.5 11.7 99 58-215 191-289 (484)
186 3dgh_A TRXR-1, thioredoxin red 98.8 1.8E-08 6E-13 90.3 9.8 34 57-90 8-41 (483)
187 1mo9_A ORF3; nucleotide bindin 98.8 3.7E-08 1.3E-12 89.0 11.8 38 56-93 41-78 (523)
188 1lvl_A Dihydrolipoamide dehydr 98.8 2.1E-08 7E-13 89.2 9.9 34 57-90 4-37 (458)
189 1v59_A Dihydrolipoamide dehydr 98.8 2.4E-08 8.1E-13 89.3 10.3 100 58-216 183-289 (478)
190 1zmd_A Dihydrolipoyl dehydroge 98.8 3.3E-08 1.1E-12 88.2 11.2 101 58-215 178-283 (474)
191 2cdu_A NADPH oxidase; flavoenz 98.8 4.4E-08 1.5E-12 86.9 11.7 100 58-215 149-248 (452)
192 2a8x_A Dihydrolipoyl dehydroge 98.8 4.1E-08 1.4E-12 87.4 11.4 99 58-215 171-272 (464)
193 4eqs_A Coenzyme A disulfide re 98.8 2.1E-08 7.1E-13 88.6 9.3 109 60-214 2-116 (437)
194 3ntd_A FAD-dependent pyridine 98.8 6.3E-08 2.2E-12 88.4 12.8 100 58-215 151-268 (565)
195 3iwa_A FAD-dependent pyridine 98.8 6.2E-08 2.1E-12 86.4 12.2 107 58-222 159-268 (472)
196 1trb_A Thioredoxin reductase; 98.8 4.1E-08 1.4E-12 82.8 10.5 98 58-215 145-248 (320)
197 2qae_A Lipoamide, dihydrolipoy 98.8 4.1E-08 1.4E-12 87.6 10.9 99 58-215 174-277 (468)
198 4dna_A Probable glutathione re 98.8 4.1E-08 1.4E-12 87.4 10.9 99 58-215 170-269 (463)
199 3ic9_A Dihydrolipoamide dehydr 98.8 9.3E-10 3.2E-14 98.8 0.3 34 58-91 8-41 (492)
200 2bc0_A NADH oxidase; flavoprot 98.8 6E-08 2.1E-12 86.9 11.9 100 57-215 193-292 (490)
201 1lvl_A Dihydrolipoamide dehydr 98.7 3.2E-08 1.1E-12 88.0 9.8 97 58-215 171-269 (458)
202 3dk9_A Grase, GR, glutathione 98.7 1.5E-08 5.2E-13 90.6 7.7 35 57-91 19-53 (478)
203 3fpz_A Thiazole biosynthetic e 98.7 1.2E-08 4E-13 86.7 6.6 40 55-94 62-103 (326)
204 3oc4_A Oxidoreductase, pyridin 98.7 8.8E-08 3E-12 85.0 12.5 99 58-215 147-245 (452)
205 2gag_A Heterotetrameric sarcos 98.7 2.3E-08 7.8E-13 96.6 9.3 36 58-93 128-163 (965)
206 4b1b_A TRXR, thioredoxin reduc 98.7 1.1E-07 3.7E-12 85.9 13.0 99 57-215 222-320 (542)
207 2hqm_A GR, grase, glutathione 98.7 1.6E-08 5.6E-13 90.4 7.5 35 57-91 10-44 (479)
208 2vdc_G Glutamate synthase [NAD 98.7 3.6E-09 1.2E-13 93.9 3.1 37 57-93 121-157 (456)
209 4dna_A Probable glutathione re 98.7 1.9E-08 6.4E-13 89.6 7.3 34 57-90 4-37 (463)
210 3itj_A Thioredoxin reductase 1 98.7 5.7E-08 2E-12 82.4 10.0 94 58-214 173-271 (338)
211 1dxl_A Dihydrolipoamide dehydr 98.7 4.3E-08 1.5E-12 87.4 9.6 99 58-215 177-280 (470)
212 2eq6_A Pyruvate dehydrogenase 98.7 4.1E-08 1.4E-12 87.4 9.4 34 58-91 6-39 (464)
213 4g6h_A Rotenone-insensitive NA 98.7 3.4E-08 1.2E-12 88.7 8.6 37 56-92 40-76 (502)
214 2q0l_A TRXR, thioredoxin reduc 98.7 1.1E-07 3.8E-12 79.8 11.2 94 58-214 143-241 (311)
215 1zk7_A HGII, reductase, mercur 98.7 8.3E-08 2.8E-12 85.5 10.9 97 58-215 176-272 (467)
216 3ic9_A Dihydrolipoamide dehydr 98.7 1.1E-07 3.8E-12 85.3 11.7 98 58-215 174-275 (492)
217 4eqs_A Coenzyme A disulfide re 98.7 9.9E-08 3.4E-12 84.2 11.2 94 58-214 147-240 (437)
218 1m6i_A Programmed cell death p 98.7 1.2E-07 4.2E-12 85.0 11.6 107 58-222 180-292 (493)
219 1xhc_A NADH oxidase /nitrite r 98.7 4.7E-08 1.6E-12 84.3 8.5 99 59-222 144-244 (367)
220 3lad_A Dihydrolipoamide dehydr 98.7 1.4E-07 4.8E-12 84.2 11.8 99 58-215 180-281 (476)
221 3cgb_A Pyridine nucleotide-dis 98.7 1E-07 3.5E-12 85.2 10.8 99 57-215 185-283 (480)
222 3urh_A Dihydrolipoyl dehydroge 98.7 1.2E-07 4E-12 85.1 11.2 99 58-215 198-301 (491)
223 3ics_A Coenzyme A-disulfide re 98.7 1.2E-07 4E-12 87.0 11.2 97 58-215 187-283 (588)
224 3k30_A Histamine dehydrogenase 98.7 1.4E-08 4.6E-13 94.9 4.7 38 56-93 389-426 (690)
225 1ges_A Glutathione reductase; 98.6 1.3E-07 4.6E-12 83.8 10.5 35 57-91 3-37 (450)
226 3dk9_A Grase, GR, glutathione 98.6 1.6E-07 5.3E-12 84.0 11.0 100 58-215 187-294 (478)
227 3cty_A Thioredoxin reductase; 98.6 1.9E-07 6.5E-12 78.8 10.9 94 58-215 155-253 (319)
228 3dgh_A TRXR-1, thioredoxin red 98.6 2.3E-07 7.8E-12 83.0 11.8 98 58-214 187-289 (483)
229 1fec_A Trypanothione reductase 98.6 9.8E-08 3.4E-12 85.5 9.2 33 57-89 2-35 (490)
230 1fl2_A Alkyl hydroperoxide red 98.6 2.1E-07 7.2E-12 78.1 10.8 94 58-214 144-242 (310)
231 3r9u_A Thioredoxin reductase; 98.6 2.3E-07 7.8E-12 77.9 10.8 94 58-214 147-244 (315)
232 2zbw_A Thioredoxin reductase; 98.6 1.6E-07 5.3E-12 79.8 9.9 97 58-215 152-253 (335)
233 2wpf_A Trypanothione reductase 98.6 2.9E-08 9.8E-13 89.1 5.5 33 57-89 6-39 (495)
234 4b1b_A TRXR, thioredoxin reduc 98.6 8.4E-08 2.9E-12 86.7 8.2 35 57-91 41-75 (542)
235 2q7v_A Thioredoxin reductase; 98.6 2.7E-07 9.4E-12 78.0 10.8 94 58-215 152-250 (325)
236 1vdc_A NTR, NADPH dependent th 98.6 2.8E-07 9.7E-12 78.1 10.9 96 57-215 158-260 (333)
237 3f8d_A Thioredoxin reductase ( 98.6 3.8E-07 1.3E-11 76.8 11.3 94 58-215 154-252 (323)
238 3ab1_A Ferredoxin--NADP reduct 98.6 9.6E-08 3.3E-12 82.0 7.1 98 58-215 163-264 (360)
239 3l8k_A Dihydrolipoyl dehydroge 98.6 3.2E-07 1.1E-11 81.7 10.7 97 58-215 172-273 (466)
240 2e1m_A L-glutamate oxidase; L- 98.6 6.8E-08 2.3E-12 83.1 6.0 38 56-93 42-80 (376)
241 1lqt_A FPRA; NADP+ derivative, 98.6 1.1E-08 3.7E-13 90.9 1.1 36 58-93 3-45 (456)
242 3dgz_A Thioredoxin reductase 2 98.6 4.5E-07 1.5E-11 81.2 11.6 98 58-214 185-287 (488)
243 3d1c_A Flavin-containing putat 98.6 3.8E-07 1.3E-11 78.4 10.8 106 58-215 166-273 (369)
244 1v0j_A UDP-galactopyranose mut 98.6 8.5E-08 2.9E-12 83.7 6.6 38 57-94 6-44 (399)
245 1gte_A Dihydropyrimidine dehyd 98.5 1.8E-08 6.3E-13 97.8 1.8 37 57-93 186-223 (1025)
246 1ps9_A 2,4-dienoyl-COA reducta 98.5 1E-07 3.6E-12 88.7 6.1 38 56-93 371-408 (671)
247 3hdq_A UDP-galactopyranose mut 98.5 1.6E-07 5.3E-12 81.5 6.3 39 56-94 27-65 (397)
248 1cjc_A Protein (adrenodoxin re 98.5 3.7E-08 1.3E-12 87.5 2.2 37 57-93 5-43 (460)
249 3kd9_A Coenzyme A disulfide re 98.5 9.2E-07 3.1E-11 78.3 11.0 96 58-214 148-244 (449)
250 3s5w_A L-ornithine 5-monooxyge 98.5 6.2E-07 2.1E-11 79.7 9.7 134 58-215 227-378 (463)
251 2iid_A L-amino-acid oxidase; f 98.4 4.5E-07 1.5E-11 81.4 8.1 39 56-94 31-69 (498)
252 2a87_A TRXR, TR, thioredoxin r 98.4 5.2E-07 1.8E-11 76.6 8.1 94 58-215 155-253 (335)
253 1i8t_A UDP-galactopyranose mut 98.4 2.2E-07 7.4E-12 80.2 5.6 37 58-94 1-37 (367)
254 1hyu_A AHPF, alkyl hydroperoxi 98.4 1.3E-06 4.6E-11 78.8 10.7 94 58-214 355-453 (521)
255 4dsg_A UDP-galactopyranose mut 98.4 3.4E-07 1.2E-11 81.9 6.4 56 158-216 215-272 (484)
256 3lzw_A Ferredoxin--NADP reduct 98.4 8.4E-07 2.9E-11 75.0 8.4 92 58-214 154-250 (332)
257 4g6h_A Rotenone-insensitive NA 98.4 7.7E-07 2.6E-11 79.9 8.4 95 59-213 218-331 (502)
258 3klj_A NAD(FAD)-dependent dehy 98.4 2.3E-07 7.9E-12 80.5 4.1 36 58-93 146-181 (385)
259 2x8g_A Thioredoxin glutathione 98.3 3.9E-06 1.3E-10 77.1 12.2 33 58-90 286-318 (598)
260 2bi7_A UDP-galactopyranose mut 98.3 5.6E-07 1.9E-11 78.0 6.2 37 58-94 3-39 (384)
261 3qfa_A Thioredoxin reductase 1 98.3 5.1E-06 1.7E-10 74.9 11.8 98 58-214 210-315 (519)
262 3k30_A Histamine dehydrogenase 98.3 9.4E-07 3.2E-11 82.5 6.6 97 58-214 523-624 (690)
263 1onf_A GR, grase, glutathione 98.3 8.2E-07 2.8E-11 79.8 5.4 34 58-91 2-35 (500)
264 3fbs_A Oxidoreductase; structu 98.2 3.2E-06 1.1E-10 70.2 8.4 86 58-214 141-226 (297)
265 2r9z_A Glutathione amide reduc 98.2 8.6E-07 2.9E-11 78.8 5.2 35 57-91 3-37 (463)
266 4a5l_A Thioredoxin reductase; 98.2 6.1E-06 2.1E-10 69.2 10.0 36 58-93 152-187 (314)
267 3pl8_A Pyranose 2-oxidase; sub 98.2 1E-06 3.5E-11 81.1 5.2 38 57-94 45-82 (623)
268 3gwf_A Cyclohexanone monooxyge 98.2 3.4E-06 1.2E-10 76.4 8.0 36 57-92 177-212 (540)
269 1kdg_A CDH, cellobiose dehydro 98.2 1.3E-06 4.5E-11 79.3 5.1 36 57-92 6-41 (546)
270 2gag_A Heterotetrameric sarcos 98.2 5.6E-06 1.9E-10 80.0 9.5 90 58-214 284-383 (965)
271 3t37_A Probable dehydrogenase; 98.2 1.2E-06 4E-11 79.2 4.2 36 57-92 16-52 (526)
272 1o94_A Tmadh, trimethylamine d 98.1 2.2E-06 7.4E-11 80.5 6.1 38 56-93 387-424 (729)
273 3uox_A Otemo; baeyer-villiger 98.1 7.2E-06 2.5E-10 74.3 8.7 35 58-92 185-219 (545)
274 2xve_A Flavin-containing monoo 98.1 2E-05 6.9E-10 70.0 11.4 36 58-93 197-232 (464)
275 2gv8_A Monooxygenase; FMO, FAD 98.1 7.6E-06 2.6E-10 72.4 8.6 35 58-92 212-247 (447)
276 2z3y_A Lysine-specific histone 98.1 2.8E-06 9.6E-11 78.9 6.0 38 57-94 106-143 (662)
277 2x8g_A Thioredoxin glutathione 98.1 2.4E-06 8.1E-11 78.5 5.0 35 56-90 105-139 (598)
278 2xag_A Lysine-specific histone 98.1 5.1E-06 1.7E-10 78.8 7.1 38 57-94 277-314 (852)
279 3q9t_A Choline dehydrogenase a 98.0 4.5E-06 1.5E-10 76.0 4.4 36 57-92 5-41 (577)
280 4ap3_A Steroid monooxygenase; 98.0 3.1E-06 1.1E-10 76.8 3.3 35 58-92 191-225 (549)
281 1ju2_A HydroxynitrIle lyase; f 98.0 3.4E-06 1.2E-10 76.3 3.3 35 57-92 25-59 (536)
282 1o94_A Tmadh, trimethylamine d 98.0 9E-06 3.1E-10 76.3 6.2 34 58-91 528-563 (729)
283 2vdc_G Glutamate synthase [NAD 97.9 1.5E-05 5E-10 70.6 6.4 37 57-93 263-300 (456)
284 1gte_A Dihydropyrimidine dehyd 97.9 5.9E-05 2E-09 73.4 11.1 33 59-91 333-366 (1025)
285 1cjc_A Protein (adrenodoxin re 97.9 4.1E-05 1.4E-09 67.9 9.1 36 58-93 145-201 (460)
286 1ps9_A 2,4-dienoyl-COA reducta 97.9 4.8E-05 1.7E-09 70.7 9.7 41 171-215 587-629 (671)
287 3qvp_A Glucose oxidase; oxidor 97.9 8E-06 2.7E-10 74.4 4.2 35 57-91 18-53 (583)
288 4gcm_A TRXR, thioredoxin reduc 97.9 0.0001 3.5E-09 61.6 10.7 36 58-93 145-180 (312)
289 1n4w_A CHOD, cholesterol oxida 97.9 1.2E-05 4E-10 72.3 4.9 35 57-91 4-38 (504)
290 3ayj_A Pro-enzyme of L-phenyla 97.8 7.1E-06 2.4E-10 76.0 3.3 36 58-93 56-100 (721)
291 1lqt_A FPRA; NADP+ derivative, 97.8 5.2E-05 1.8E-09 67.1 8.8 36 58-93 147-203 (456)
292 1coy_A Cholesterol oxidase; ox 97.8 1.6E-05 5.5E-10 71.4 5.0 35 57-91 10-44 (507)
293 3fim_B ARYL-alcohol oxidase; A 97.8 8.1E-06 2.8E-10 74.1 2.8 36 58-93 2-38 (566)
294 1gpe_A Protein (glucose oxidas 97.8 2.4E-05 8.2E-10 71.5 5.5 37 57-93 23-60 (587)
295 1vg0_A RAB proteins geranylger 97.8 4.9E-05 1.7E-09 69.5 7.4 56 57-113 7-62 (650)
296 2jbv_A Choline oxidase; alcoho 97.7 2.3E-05 7.9E-10 71.0 4.2 37 57-93 12-49 (546)
297 4a9w_A Monooxygenase; baeyer-v 97.7 6.5E-05 2.2E-09 63.8 6.4 33 58-91 163-195 (357)
298 4fk1_A Putative thioredoxin re 97.6 0.00029 9.9E-09 58.7 9.5 90 58-214 146-236 (304)
299 3h8l_A NADH oxidase; membrane 97.6 0.00022 7.5E-09 62.1 8.9 39 171-214 232-270 (409)
300 3h28_A Sulfide-quinone reducta 97.3 0.00048 1.6E-08 60.4 7.0 38 171-213 214-255 (430)
301 3sx6_A Sulfide-quinone reducta 97.3 0.00058 2E-08 60.1 7.5 39 171-212 222-267 (437)
302 3fwz_A Inner membrane protein 97.3 0.00038 1.3E-08 50.9 5.2 36 57-92 6-41 (140)
303 1w4x_A Phenylacetone monooxyge 97.2 0.00091 3.1E-08 60.5 7.9 36 58-93 186-221 (542)
304 2g1u_A Hypothetical protein TM 97.2 0.00054 1.8E-08 51.0 5.2 35 58-92 19-53 (155)
305 3llv_A Exopolyphosphatase-rela 97.1 0.00057 1.9E-08 49.9 4.8 34 58-91 6-39 (141)
306 1lss_A TRK system potassium up 97.0 0.00083 2.8E-08 48.7 5.0 33 59-91 5-37 (140)
307 4b63_A L-ornithine N5 monooxyg 96.9 0.0034 1.2E-07 56.2 8.9 36 58-93 246-283 (501)
308 1id1_A Putative potassium chan 96.9 0.0015 5.1E-08 48.4 5.6 34 58-91 3-36 (153)
309 3ic5_A Putative saccharopine d 96.8 0.0013 4.4E-08 46.1 4.6 34 58-91 5-39 (118)
310 1f0y_A HCDH, L-3-hydroxyacyl-C 96.7 0.002 6.9E-08 53.6 5.3 35 58-92 15-49 (302)
311 3ado_A Lambda-crystallin; L-gu 96.7 0.0016 5.4E-08 54.5 4.5 35 58-92 6-40 (319)
312 3vrd_B FCCB subunit, flavocyto 96.6 0.011 3.9E-07 51.0 10.1 43 171-214 216-258 (401)
313 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0024 8.4E-08 46.4 5.0 33 59-91 7-39 (144)
314 1pzg_A LDH, lactate dehydrogen 96.6 0.0028 9.4E-08 53.5 5.4 36 57-92 8-44 (331)
315 3c85_A Putative glutathione-re 96.5 0.0035 1.2E-07 47.9 5.3 35 58-92 39-74 (183)
316 2dpo_A L-gulonate 3-dehydrogen 96.4 0.0029 9.9E-08 53.0 4.5 35 58-92 6-40 (319)
317 3i83_A 2-dehydropantoate 2-red 96.4 0.0035 1.2E-07 52.6 5.1 33 59-91 3-35 (320)
318 1y56_A Hypothetical protein PH 96.4 0.011 3.6E-07 52.8 8.3 52 171-223 271-324 (493)
319 3l4b_C TRKA K+ channel protien 96.3 0.0029 9.9E-08 49.9 4.1 33 60-92 2-34 (218)
320 3hn2_A 2-dehydropantoate 2-red 96.2 0.0039 1.3E-07 52.1 4.5 33 59-91 3-35 (312)
321 4e12_A Diketoreductase; oxidor 96.2 0.0058 2E-07 50.3 5.3 35 58-92 4-38 (283)
322 3g17_A Similar to 2-dehydropan 96.1 0.0057 1.9E-07 50.6 4.7 33 59-91 3-35 (294)
323 3vtf_A UDP-glucose 6-dehydroge 96.1 0.0061 2.1E-07 53.2 5.1 35 57-91 20-54 (444)
324 2raf_A Putative dinucleotide-b 96.1 0.0074 2.5E-07 47.2 5.1 35 58-92 19-53 (209)
325 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0068 2.3E-07 47.9 4.8 35 57-91 30-64 (223)
326 2y0c_A BCEC, UDP-glucose dehyd 96.1 0.006 2E-07 54.1 5.0 34 58-91 8-41 (478)
327 3ghy_A Ketopantoate reductase 96.0 0.0075 2.6E-07 50.9 5.3 32 59-90 4-35 (335)
328 3p2y_A Alanine dehydrogenase/p 96.0 0.01 3.5E-07 50.7 6.0 36 57-92 183-218 (381)
329 1lld_A L-lactate dehydrogenase 96.0 0.0069 2.4E-07 50.7 5.0 34 58-91 7-42 (319)
330 1ks9_A KPA reductase;, 2-dehyd 96.0 0.0078 2.7E-07 49.5 5.1 33 60-92 2-34 (291)
331 2x5o_A UDP-N-acetylmuramoylala 96.0 0.0062 2.1E-07 53.5 4.6 36 58-93 5-40 (439)
332 2ewd_A Lactate dehydrogenase,; 95.9 0.0089 3E-07 50.1 5.3 35 58-92 4-39 (317)
333 2ew2_A 2-dehydropantoate 2-red 95.9 0.0075 2.6E-07 50.2 4.9 33 59-91 4-36 (316)
334 4dio_A NAD(P) transhydrogenase 95.9 0.0091 3.1E-07 51.4 5.4 36 57-92 189-224 (405)
335 3doj_A AT3G25530, dehydrogenas 95.9 0.0087 3E-07 49.9 5.2 36 57-92 20-55 (310)
336 3gg2_A Sugar dehydrogenase, UD 95.9 0.0077 2.6E-07 53.0 5.0 34 59-92 3-36 (450)
337 4a7p_A UDP-glucose dehydrogena 95.9 0.0088 3E-07 52.5 5.2 36 58-93 8-43 (446)
338 3k96_A Glycerol-3-phosphate de 95.9 0.0089 3.1E-07 50.9 5.1 34 58-91 29-62 (356)
339 2hjr_A Malate dehydrogenase; m 95.9 0.01 3.4E-07 50.0 5.4 35 58-92 14-49 (328)
340 3lk7_A UDP-N-acetylmuramoylala 95.9 0.0085 2.9E-07 52.8 5.1 34 58-91 9-42 (451)
341 1kyq_A Met8P, siroheme biosynt 95.8 0.0057 2E-07 49.9 3.5 35 57-91 12-46 (274)
342 1jw9_B Molybdopterin biosynthe 95.8 0.009 3.1E-07 48.1 4.6 34 58-91 31-65 (249)
343 3g79_A NDP-N-acetyl-D-galactos 95.8 0.0092 3.1E-07 52.8 4.9 35 58-92 18-54 (478)
344 1t2d_A LDH-P, L-lactate dehydr 95.8 0.013 4.4E-07 49.2 5.5 35 58-92 4-39 (322)
345 3k6j_A Protein F01G10.3, confi 95.7 0.013 4.3E-07 51.6 5.5 35 58-92 54-88 (460)
346 4g65_A TRK system potassium up 95.6 0.0042 1.4E-07 54.9 2.2 34 58-91 3-36 (461)
347 2v6b_A L-LDH, L-lactate dehydr 95.6 0.012 4.2E-07 48.9 4.9 32 60-91 2-35 (304)
348 3pid_A UDP-glucose 6-dehydroge 95.6 0.011 3.6E-07 51.6 4.7 35 57-92 35-69 (432)
349 3l9w_A Glutathione-regulated p 95.6 0.012 4.1E-07 51.1 4.8 35 58-92 4-38 (413)
350 3ego_A Probable 2-dehydropanto 95.6 0.013 4.3E-07 48.9 4.8 32 59-91 3-34 (307)
351 1zej_A HBD-9, 3-hydroxyacyl-CO 95.6 0.011 3.7E-07 48.8 4.3 35 57-92 11-45 (293)
352 3g0o_A 3-hydroxyisobutyrate de 95.6 0.014 4.7E-07 48.5 5.0 35 58-92 7-41 (303)
353 3tl2_A Malate dehydrogenase; c 95.6 0.015 5.1E-07 48.6 5.2 34 58-91 8-42 (315)
354 2a9f_A Putative malic enzyme ( 95.5 0.014 4.8E-07 49.8 4.9 35 57-91 187-222 (398)
355 1bg6_A N-(1-D-carboxylethyl)-L 95.5 0.014 4.7E-07 49.6 5.0 33 59-91 5-37 (359)
356 3hwr_A 2-dehydropantoate 2-red 95.5 0.014 4.9E-07 48.8 4.9 33 58-91 19-51 (318)
357 3pef_A 6-phosphogluconate dehy 95.5 0.015 5.3E-07 47.8 4.9 34 59-92 2-35 (287)
358 2vns_A Metalloreductase steap3 95.4 0.02 6.8E-07 45.0 5.2 34 58-91 28-61 (215)
359 1mv8_A GMD, GDP-mannose 6-dehy 95.4 0.012 4.2E-07 51.5 4.3 32 60-91 2-33 (436)
360 1ur5_A Malate dehydrogenase; o 95.4 0.019 6.5E-07 47.8 5.3 33 59-91 3-36 (309)
361 1zcj_A Peroxisomal bifunctiona 95.4 0.016 5.6E-07 51.2 5.1 35 58-92 37-71 (463)
362 3gvi_A Malate dehydrogenase; N 95.4 0.02 7E-07 47.9 5.4 35 58-92 7-42 (324)
363 1z82_A Glycerol-3-phosphate de 95.4 0.017 6E-07 48.6 5.0 35 57-91 13-47 (335)
364 3qha_A Putative oxidoreductase 95.4 0.013 4.5E-07 48.5 4.1 36 58-93 15-50 (296)
365 3dtt_A NADP oxidoreductase; st 95.3 0.02 7E-07 45.9 5.1 36 57-92 18-53 (245)
366 1guz_A Malate dehydrogenase; o 95.3 0.02 6.8E-07 47.7 5.2 33 60-92 2-36 (310)
367 1y6j_A L-lactate dehydrogenase 95.3 0.019 6.6E-07 48.0 5.1 35 58-92 7-43 (318)
368 3eag_A UDP-N-acetylmuramate:L- 95.3 0.021 7.1E-07 48.0 5.3 35 58-92 4-39 (326)
369 3h8v_A Ubiquitin-like modifier 95.3 0.016 5.6E-07 47.6 4.5 35 57-91 35-70 (292)
370 1x13_A NAD(P) transhydrogenase 95.3 0.019 6.4E-07 49.8 5.0 35 58-92 172-206 (401)
371 3pqe_A L-LDH, L-lactate dehydr 95.3 0.02 6.7E-07 48.1 5.0 34 58-91 5-40 (326)
372 3pdu_A 3-hydroxyisobutyrate de 95.3 0.015 5.1E-07 47.9 4.3 33 60-92 3-35 (287)
373 2qyt_A 2-dehydropantoate 2-red 95.3 0.013 4.4E-07 48.9 3.8 31 59-89 9-45 (317)
374 1vl6_A Malate oxidoreductase; 95.2 0.02 6.8E-07 48.8 4.9 36 56-91 190-226 (388)
375 1l7d_A Nicotinamide nucleotide 95.2 0.023 8E-07 48.9 5.4 36 57-92 171-206 (384)
376 3hyw_A Sulfide-quinone reducta 95.2 0.11 3.9E-06 45.2 9.9 40 171-213 214-255 (430)
377 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.0077 2.6E-07 44.0 2.0 34 58-91 21-54 (144)
378 4huj_A Uncharacterized protein 95.2 0.012 4.2E-07 46.4 3.3 35 58-92 23-58 (220)
379 4dll_A 2-hydroxy-3-oxopropiona 95.2 0.02 6.8E-07 48.0 4.7 36 57-92 30-65 (320)
380 3p7m_A Malate dehydrogenase; p 95.2 0.028 9.5E-07 47.1 5.5 35 58-92 5-40 (321)
381 4ffl_A PYLC; amino acid, biosy 95.2 0.024 8.3E-07 48.3 5.3 34 59-92 2-35 (363)
382 3rui_A Ubiquitin-like modifier 95.1 0.024 8.1E-07 47.6 5.0 34 58-91 34-68 (340)
383 2uyy_A N-PAC protein; long-cha 95.1 0.029 9.9E-07 46.8 5.6 35 58-92 30-64 (316)
384 3l6d_A Putative oxidoreductase 95.1 0.03 1E-06 46.5 5.6 35 58-92 9-43 (306)
385 3qsg_A NAD-binding phosphogluc 95.1 0.021 7E-07 47.7 4.6 33 58-90 24-57 (312)
386 1txg_A Glycerol-3-phosphate de 95.1 0.02 6.9E-07 48.1 4.5 30 60-89 2-31 (335)
387 1ldn_A L-lactate dehydrogenase 95.1 0.026 8.8E-07 47.2 5.1 34 58-91 6-41 (316)
388 3mog_A Probable 3-hydroxybutyr 95.0 0.027 9.3E-07 50.0 5.3 35 58-92 5-39 (483)
389 1pjc_A Protein (L-alanine dehy 95.0 0.024 8.4E-07 48.3 4.9 34 58-91 167-200 (361)
390 2h78_A Hibadh, 3-hydroxyisobut 95.0 0.022 7.6E-07 47.2 4.5 33 59-91 4-36 (302)
391 3ggo_A Prephenate dehydrogenas 95.0 0.032 1.1E-06 46.5 5.4 34 58-91 33-68 (314)
392 1a5z_A L-lactate dehydrogenase 94.9 0.024 8.3E-07 47.4 4.6 32 60-91 2-35 (319)
393 2i6t_A Ubiquitin-conjugating e 94.9 0.026 8.8E-07 46.9 4.7 35 58-92 14-50 (303)
394 3ius_A Uncharacterized conserv 94.9 0.025 8.5E-07 46.2 4.5 35 58-92 5-39 (286)
395 1dlj_A UDP-glucose dehydrogena 94.9 0.019 6.6E-07 49.7 3.9 31 60-91 2-32 (402)
396 1zud_1 Adenylyltransferase THI 94.8 0.027 9.1E-07 45.4 4.4 34 58-91 28-62 (251)
397 4ezb_A Uncharacterized conserv 94.8 0.026 9E-07 47.2 4.5 34 58-91 24-58 (317)
398 3ktd_A Prephenate dehydrogenas 94.8 0.038 1.3E-06 46.6 5.5 34 58-91 8-41 (341)
399 3dfu_A Uncharacterized protein 94.8 0.0089 3.1E-07 47.4 1.4 34 58-91 6-39 (232)
400 3ldh_A Lactate dehydrogenase; 94.8 0.034 1.2E-06 46.6 5.0 34 58-91 21-56 (330)
401 1vpd_A Tartronate semialdehyde 94.7 0.027 9.2E-07 46.5 4.3 33 59-91 6-38 (299)
402 3d0o_A L-LDH 1, L-lactate dehy 94.7 0.033 1.1E-06 46.6 4.9 34 58-91 6-41 (317)
403 2eez_A Alanine dehydrogenase; 94.7 0.036 1.2E-06 47.4 5.2 34 58-91 166-199 (369)
404 1evy_A Glycerol-3-phosphate de 94.7 0.018 6E-07 49.2 3.3 32 60-91 17-48 (366)
405 2pv7_A T-protein [includes: ch 94.7 0.032 1.1E-06 46.1 4.8 33 59-91 22-55 (298)
406 2q3e_A UDP-glucose 6-dehydroge 94.7 0.026 8.8E-07 50.0 4.4 33 59-91 6-40 (467)
407 1jay_A Coenzyme F420H2:NADP+ o 94.7 0.035 1.2E-06 43.3 4.7 32 60-91 2-34 (212)
408 2o3j_A UDP-glucose 6-dehydroge 94.7 0.028 9.4E-07 50.0 4.5 33 59-91 10-44 (481)
409 3gpi_A NAD-dependent epimerase 94.7 0.048 1.6E-06 44.6 5.7 34 59-92 4-37 (286)
410 1oju_A MDH, malate dehydrogena 94.7 0.032 1.1E-06 46.1 4.6 32 60-91 2-35 (294)
411 3vku_A L-LDH, L-lactate dehydr 94.6 0.037 1.3E-06 46.4 4.9 35 57-91 8-44 (326)
412 2rcy_A Pyrroline carboxylate r 94.6 0.042 1.4E-06 44.3 5.2 35 59-93 5-43 (262)
413 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.033 1.1E-06 46.3 4.6 33 59-91 2-36 (309)
414 3h5n_A MCCB protein; ubiquitin 94.6 0.034 1.2E-06 47.2 4.7 34 58-91 118-152 (353)
415 4e21_A 6-phosphogluconate dehy 94.6 0.038 1.3E-06 47.0 5.0 35 58-92 22-56 (358)
416 1nyt_A Shikimate 5-dehydrogena 94.6 0.043 1.5E-06 44.8 5.1 34 58-91 119-152 (271)
417 3nep_X Malate dehydrogenase; h 94.6 0.038 1.3E-06 46.1 4.8 33 60-92 2-36 (314)
418 2f1k_A Prephenate dehydrogenas 94.6 0.039 1.3E-06 45.0 4.9 32 60-91 2-33 (279)
419 1yj8_A Glycerol-3-phosphate de 94.6 0.032 1.1E-06 47.8 4.5 34 59-92 22-62 (375)
420 3c24_A Putative oxidoreductase 94.5 0.047 1.6E-06 44.8 5.3 33 59-91 12-45 (286)
421 2vhw_A Alanine dehydrogenase; 94.5 0.043 1.5E-06 47.1 5.2 34 58-91 168-201 (377)
422 3phh_A Shikimate dehydrogenase 94.5 0.049 1.7E-06 44.3 5.2 35 58-92 118-152 (269)
423 2aef_A Calcium-gated potassium 94.5 0.015 5E-07 46.3 2.1 34 58-92 9-42 (234)
424 3ojo_A CAP5O; rossmann fold, c 94.5 0.026 9.1E-07 49.2 3.8 34 59-92 12-45 (431)
425 2p4q_A 6-phosphogluconate dehy 94.4 0.05 1.7E-06 48.4 5.5 36 57-92 9-44 (497)
426 4aj2_A L-lactate dehydrogenase 94.4 0.051 1.8E-06 45.6 5.3 35 57-91 18-54 (331)
427 1yqg_A Pyrroline-5-carboxylate 94.4 0.041 1.4E-06 44.4 4.6 32 60-91 2-34 (263)
428 1x0v_A GPD-C, GPDH-C, glycerol 94.4 0.025 8.7E-07 47.9 3.4 34 59-92 9-49 (354)
429 3cky_A 2-hydroxymethyl glutara 94.4 0.04 1.4E-06 45.5 4.5 34 58-91 4-37 (301)
430 2gf2_A Hibadh, 3-hydroxyisobut 94.4 0.043 1.5E-06 45.2 4.7 33 60-92 2-34 (296)
431 4gwg_A 6-phosphogluconate dehy 94.3 0.053 1.8E-06 48.0 5.4 35 58-92 4-38 (484)
432 3fi9_A Malate dehydrogenase; s 94.3 0.058 2E-06 45.5 5.4 34 58-91 8-44 (343)
433 2g5c_A Prephenate dehydrogenas 94.3 0.051 1.7E-06 44.4 5.0 32 60-91 3-36 (281)
434 2zyd_A 6-phosphogluconate dehy 94.3 0.044 1.5E-06 48.6 4.9 35 57-91 14-48 (480)
435 2wtb_A MFP2, fatty acid multif 94.3 0.048 1.6E-06 51.0 5.3 34 59-92 313-346 (725)
436 1pjq_A CYSG, siroheme synthase 94.3 0.045 1.6E-06 48.2 4.9 34 58-91 12-45 (457)
437 3tri_A Pyrroline-5-carboxylate 94.3 0.065 2.2E-06 43.9 5.5 35 58-92 3-40 (280)
438 3gt0_A Pyrroline-5-carboxylate 94.3 0.061 2.1E-06 43.1 5.3 34 59-92 3-40 (247)
439 4gsl_A Ubiquitin-like modifier 94.2 0.048 1.6E-06 49.3 5.0 34 58-91 326-360 (615)
440 2egg_A AROE, shikimate 5-dehyd 94.2 0.051 1.8E-06 44.9 4.8 34 58-91 141-175 (297)
441 3d1l_A Putative NADP oxidoredu 94.2 0.053 1.8E-06 43.9 4.8 33 59-91 11-44 (266)
442 1np3_A Ketol-acid reductoisome 94.2 0.064 2.2E-06 45.2 5.5 33 59-91 17-49 (338)
443 2izz_A Pyrroline-5-carboxylate 94.2 0.055 1.9E-06 45.3 5.0 35 58-92 22-60 (322)
444 2pgd_A 6-phosphogluconate dehy 94.2 0.056 1.9E-06 48.0 5.3 33 59-91 3-35 (482)
445 3c7a_A Octopine dehydrogenase; 94.2 0.027 9.3E-07 48.8 3.2 30 59-88 3-33 (404)
446 3e8x_A Putative NAD-dependent 94.1 0.06 2.1E-06 42.6 5.0 35 58-92 21-56 (236)
447 2cvz_A Dehydrogenase, 3-hydrox 94.1 0.045 1.5E-06 44.9 4.3 31 60-91 3-33 (289)
448 3ew7_A LMO0794 protein; Q8Y8U8 94.1 0.067 2.3E-06 41.6 5.1 32 60-91 2-34 (221)
449 3vh1_A Ubiquitin-like modifier 94.1 0.049 1.7E-06 49.2 4.7 34 58-91 327-361 (598)
450 1tt5_B Ubiquitin-activating en 94.0 0.061 2.1E-06 46.9 5.1 34 58-91 40-74 (434)
451 1y8q_A Ubiquitin-like 1 activa 94.0 0.055 1.9E-06 45.8 4.7 34 58-91 36-70 (346)
452 3ond_A Adenosylhomocysteinase; 94.0 0.063 2.1E-06 47.3 5.1 34 58-91 265-298 (488)
453 1ez4_A Lactate dehydrogenase; 93.9 0.066 2.3E-06 44.7 5.0 34 58-91 5-40 (318)
454 2d4a_B Malate dehydrogenase; a 93.9 0.065 2.2E-06 44.5 4.9 33 60-92 1-34 (308)
455 3d4o_A Dipicolinate synthase s 93.9 0.073 2.5E-06 43.9 5.2 35 57-91 154-188 (293)
456 3don_A Shikimate dehydrogenase 93.9 0.054 1.8E-06 44.3 4.3 35 58-92 117-152 (277)
457 4gx0_A TRKA domain protein; me 93.9 0.065 2.2E-06 48.6 5.3 57 59-115 349-406 (565)
458 1p77_A Shikimate 5-dehydrogena 93.9 0.05 1.7E-06 44.3 4.2 34 58-91 119-152 (272)
459 2rir_A Dipicolinate synthase, 93.9 0.075 2.5E-06 44.0 5.2 35 57-91 156-190 (300)
460 3vps_A TUNA, NAD-dependent epi 93.8 0.079 2.7E-06 43.8 5.4 35 58-92 7-42 (321)
461 4gbj_A 6-phosphogluconate dehy 93.8 0.044 1.5E-06 45.3 3.7 35 58-92 5-39 (297)
462 2hk9_A Shikimate dehydrogenase 93.8 0.062 2.1E-06 43.9 4.6 34 58-91 129-162 (275)
463 3two_A Mannitol dehydrogenase; 93.8 0.12 4.2E-06 43.6 6.6 47 57-116 176-222 (348)
464 3h2s_A Putative NADH-flavin re 93.7 0.081 2.8E-06 41.3 5.0 32 60-91 2-34 (224)
465 1wdk_A Fatty oxidation complex 93.7 0.063 2.2E-06 50.1 4.9 35 58-92 314-348 (715)
466 1pgj_A 6PGDH, 6-PGDH, 6-phosph 93.7 0.07 2.4E-06 47.3 5.0 32 60-91 3-34 (478)
467 3u62_A Shikimate dehydrogenase 93.7 0.088 3E-06 42.4 5.1 32 60-91 110-142 (253)
468 4id9_A Short-chain dehydrogena 93.6 0.089 3.1E-06 44.2 5.4 36 57-92 18-54 (347)
469 3gvp_A Adenosylhomocysteinase 93.6 0.065 2.2E-06 46.4 4.4 35 57-91 219-253 (435)
470 1yb4_A Tartronic semialdehyde 93.6 0.044 1.5E-06 45.1 3.4 33 59-92 4-36 (295)
471 2ahr_A Putative pyrroline carb 93.5 0.064 2.2E-06 43.2 4.2 33 59-91 4-36 (259)
472 4b4o_A Epimerase family protei 93.5 0.097 3.3E-06 43.0 5.4 33 60-92 2-35 (298)
473 3jyo_A Quinate/shikimate dehyd 93.5 0.095 3.3E-06 42.9 5.2 35 57-91 126-161 (283)
474 1hdo_A Biliverdin IX beta redu 93.5 0.096 3.3E-06 40.2 4.9 34 59-92 4-38 (206)
475 3tnl_A Shikimate dehydrogenase 93.5 0.099 3.4E-06 43.5 5.2 34 58-91 154-188 (315)
476 3ce6_A Adenosylhomocysteinase; 93.5 0.073 2.5E-06 47.2 4.6 35 57-91 273-307 (494)
477 2zqz_A L-LDH, L-lactate dehydr 93.4 0.092 3.1E-06 44.0 5.0 35 57-91 8-44 (326)
478 2x0j_A Malate dehydrogenase; o 93.4 0.074 2.5E-06 43.8 4.3 32 60-91 2-35 (294)
479 2iz1_A 6-phosphogluconate dehy 93.4 0.098 3.4E-06 46.3 5.4 34 58-91 5-38 (474)
480 1i36_A Conserved hypothetical 93.3 0.072 2.5E-06 43.0 4.2 30 60-89 2-31 (264)
481 2d5c_A AROE, shikimate 5-dehyd 93.3 0.1 3.5E-06 42.2 5.0 32 60-91 118-149 (263)
482 1leh_A Leucine dehydrogenase; 93.3 0.1 3.5E-06 44.4 5.1 34 57-90 172-205 (364)
483 1piw_A Hypothetical zinc-type 93.3 0.14 4.8E-06 43.5 6.0 35 58-92 180-214 (360)
484 3dhn_A NAD-dependent epimerase 93.3 0.074 2.5E-06 41.7 4.0 34 59-92 5-39 (227)
485 2we8_A Xanthine dehydrogenase; 93.2 0.11 3.9E-06 44.5 5.3 37 57-93 203-239 (386)
486 3pwz_A Shikimate dehydrogenase 93.2 0.12 4E-06 42.2 5.1 35 57-91 119-154 (272)
487 1y8q_B Anthracycline-, ubiquit 93.2 0.082 2.8E-06 48.3 4.5 34 58-91 17-51 (640)
488 3fbt_A Chorismate mutase and s 93.1 0.1 3.4E-06 42.8 4.7 35 57-91 121-156 (282)
489 1edz_A 5,10-methylenetetrahydr 93.1 0.085 2.9E-06 43.9 4.3 35 57-91 176-211 (320)
490 3r6d_A NAD-dependent epimerase 93.1 0.15 5.1E-06 39.8 5.6 34 59-92 6-41 (221)
491 3uko_A Alcohol dehydrogenase c 93.1 0.12 4E-06 44.3 5.3 36 57-92 193-229 (378)
492 2dbq_A Glyoxylate reductase; D 93.1 0.13 4.3E-06 43.4 5.4 35 58-92 150-184 (334)
493 1nvt_A Shikimate 5'-dehydrogen 93.0 0.081 2.8E-06 43.5 4.0 33 58-91 128-160 (287)
494 3o8q_A Shikimate 5-dehydrogena 93.0 0.12 4E-06 42.3 4.9 35 57-91 125-160 (281)
495 2iid_A L-amino-acid oxidase; f 93.0 0.18 6.1E-06 44.7 6.5 53 159-213 241-297 (498)
496 3q2o_A Phosphoribosylaminoimid 93.0 0.14 4.7E-06 44.0 5.6 35 58-92 14-48 (389)
497 3orq_A N5-carboxyaminoimidazol 92.9 0.14 5E-06 43.7 5.7 35 58-92 12-46 (377)
498 1gpj_A Glutamyl-tRNA reductase 92.9 0.11 3.7E-06 45.0 4.9 35 57-91 166-201 (404)
499 1mld_A Malate dehydrogenase; o 92.9 0.091 3.1E-06 43.8 4.2 32 60-91 2-36 (314)
500 3zwc_A Peroxisomal bifunctiona 92.9 0.11 3.6E-06 48.6 5.1 35 58-92 316-350 (742)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.98 E-value=3.1e-30 Score=227.18 Aligned_cols=224 Identities=23% Similarity=0.436 Sum_probs=183.6
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 55 ~~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
...++||+|||||++|+++|+.|+++|++|+|||+.+.+...++++.+.+++.+.|+.+|+++.+.........+.+...
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 99 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDF 99 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEEC
Confidence 34579999999999999999999999999999999998877889999999999999999999999888888888888887
Q ss_pred C-CcEEEEecCCCC--CCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCC
Q 022652 135 D-GRELRSFGFKDE--DASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDG 211 (294)
Q Consensus 135 ~-~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G 211 (294)
. +.....++.... ........++|..|.+.|.+.+..++|+++++|++++.++++ +.|++.+|+++.+|+||+|||
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADG-VTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCC
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCc-EEEEEcCCCEEeeCEEEECCC
Confidence 6 666665554311 112445678999999999998866899999999999998877 558999999999999999999
Q ss_pred CCcHhhhhc-CCC-CCccccceEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCCC
Q 022652 212 IRSPIAKWI-GFS-EPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNPT 279 (294)
Q Consensus 212 ~~S~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 279 (294)
.+|.+|+.+ +.. .+.+.++.++++....+...+.......+++++.+++++|++++..+|++....+.
T Consensus 179 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 248 (407)
T 3rp8_A 179 SHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPA 248 (407)
T ss_dssp TTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCT
T ss_pred cChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCc
Confidence 999999999 775 56777888888887765443444567778899999999999999998888776544
No 2
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=2.7e-26 Score=200.10 Aligned_cols=212 Identities=22% Similarity=0.316 Sum_probs=169.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+...+.+..+.+++.+.++.+|+++.+.........+.+... +
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-g 88 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-N 88 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-T
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-C
Confidence 368999999999999999999999999999999988877788999999999999999999998877777777777776 6
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
..+..++.. ......+++.+|.+.|.+.+ .|++++++++|++++. ++ .|++.+|+++++|+||+|||.+|
T Consensus 89 ~~~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 89 KSVSKETFN----GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEEECGG----GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEETTSCEEECSEEEECCCTTC
T ss_pred ceeeeccCC----CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEECCCCEEEcCEEEECCCccH
Confidence 655444332 22357799999999998877 4899999999999987 34 47888888899999999999999
Q ss_pred HhhhhcCCC-CCccccceEEEEEEeCC----CCCCCCCceEE--EEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022652 215 PIAKWIGFS-EPKYVGHCAYRGLGYYP----NGQPFEPKLNY--IYGRGVRAGYVPVSPTKVYWFICHNN 277 (294)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (294)
.+|+.++.. .+.+.++.++++.++.. +.......... +++++.+++++|++++...|++....
T Consensus 161 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 230 (379)
T 3alj_A 161 KVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPA 230 (379)
T ss_dssp HHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECT
T ss_pred HHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecC
Confidence 999999764 34556777788777653 11111122232 56788899999999999888777654
No 3
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.7e-26 Score=202.71 Aligned_cols=214 Identities=20% Similarity=0.237 Sum_probs=167.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.+...+.+..+.+++.+.++.+|+++.+.........+.++..++
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 35899999999999999999999999999999998776778889999999999999999998876666666677776666
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCC---CCceEeCCceeEEEEcCCceE-EEEecCCCEEEcCEEEecCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLP---PESVQFSSELAKIETSGNGVT-ILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~v~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~ad~vV~A~G~ 212 (294)
.....++............+++..|.+.|.+.+. +++++++++|+++..++++++ .|++.+|+++++|+||+|+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 5555555433222334567899999999998872 689999999999998887742 688999988999999999999
Q ss_pred CcHhhhhcCCCC-Cc--cccc--eEEEEEEeCCCCCCCCCceEEEEeC-CeEEEEEEcCCCeEEEEEEE
Q 022652 213 RSPIAKWIGFSE-PK--YVGH--CAYRGLGYYPNGQPFEPKLNYIYGR-GVRAGYVPVSPTKVYWFICH 275 (294)
Q Consensus 213 ~S~~~~~~~~~~-~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~ 275 (294)
+|.+|+.++... +. +.++ .++++.+... .+.. . .++++ +.+++++|++++.+.|++.+
T Consensus 165 ~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~ 228 (399)
T 2x3n_A 165 ASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV--AERN--R-LYVDSQGGLAYFYPIGFDRARLVVSF 228 (399)
T ss_dssp TCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH--HHCE--E-EEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred ChHHHHHhCCCccccCCCCCCceEEEEEEecCC--CCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEe
Confidence 999999997763 33 5566 6666544322 1111 3 56677 88899999999888877754
No 4
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=5.2e-25 Score=193.18 Aligned_cols=210 Identities=23% Similarity=0.252 Sum_probs=161.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC-CCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC-
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL-RTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE- 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~-~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~- 134 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+ ...+.++.+.+++.+.|+.+|+++ .........+.+...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccccccccceEEEecC
Confidence 4689999999999999999999999999999998865 345788889999999999999987 334445556666665
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.+......... .....+..+.+.|.+.+++++++++++|++++.++++ +.|++.+|+++.+|+||+|||.+|
T Consensus 82 ~g~~~~~~~~~-------~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 82 TGERVGSVPAD-------WRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET-VQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp TCCEEEEEECC-------CCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC-EEEEETTSCEEEESEEEECCCTTC
T ss_pred CCCccccccCc-------ccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE-EEEEECCCCEEECCEEEECCCcch
Confidence 66655443321 1246788999999888889999999999999988777 558999998999999999999999
Q ss_pred HhhhhcCCC-CCccccceEEEEEEeCCCCCC-----CCCceEEEEeCCeEEEEEEcCCC------eEEEEEEEcC
Q 022652 215 PIAKWIGFS-EPKYVGHCAYRGLGYYPNGQP-----FEPKLNYIYGRGVRAGYVPVSPT------KVYWFICHNN 277 (294)
Q Consensus 215 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~~ 277 (294)
.+|+.++ . .+.+.++.+|++++......+ +...+.++++++.++.++|++++ ...|+++.+.
T Consensus 154 ~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 227 (397)
T 2vou_A 154 VVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNV 227 (397)
T ss_dssp HHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEEC
T ss_pred hHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecC
Confidence 9999997 4 456667778887776322111 11345666788888888998764 4445554443
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.94 E-value=7.6e-25 Score=197.09 Aligned_cols=209 Identities=20% Similarity=0.203 Sum_probs=157.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++||+|||||++|+++|+.|+++|++|+||||.+.+...+++..+.+++.++|+.+|+++++... .......+ .+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~---~~ 86 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV-ETSTQGHF---GG 86 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC-CEESEEEE---TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc-ccccccee---cc
Confidence 578999999999999999999999999999999998877888999999999999999999887654 22111111 11
Q ss_pred cEEEEecCCCCCCC-cceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCC---EEEcCEEEecC
Q 022652 137 RELRSFGFKDEDAS-QEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT---RIYANIVIGCD 210 (294)
Q Consensus 137 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~---~~~ad~vV~A~ 210 (294)
. .+++...... .....+.+..+.+.|.+.+ .+++++++++|++++.+++++ .|++.++. +++||+||+||
T Consensus 87 ~---~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v-~v~~~~~~g~~~~~a~~vVgAD 162 (499)
T 2qa2_A 87 R---PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHV-VVEVEGPDGPRSLTTRYVVGCD 162 (499)
T ss_dssp E---EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCE-EEEEECSSCEEEEEEEEEEECC
T ss_pred e---ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEE-EEEEEcCCCcEEEEeCEEEEcc
Confidence 1 1222211112 2346789999999998877 389999999999999988874 47887764 79999999999
Q ss_pred CCCcHhhhhcCCCCCccc-cceEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022652 211 GIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (294)
Q Consensus 211 G~~S~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (294)
|.+|.+|+.+|+..+... .+..+.+.+..... +....+++.++++++++|++++.+.+++...
T Consensus 163 G~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~ 226 (499)
T 2qa2_A 163 GGRSTVRKAAGFDFPGTSASREMFLADIRGCEI---TPRPIGETVPLGMVMSAPLGDGVDRIIVCER 226 (499)
T ss_dssp CTTCHHHHHTTCCCCEECCCCCEEEEEEESCCC---CCEEEEEEETTEEEEEEECSSSCEEEEEEET
T ss_pred CcccHHHHHcCCCCCCCCCccEEEEEEEEECCC---CcceEEEECCCeEEEEEEcCCCEEEEEEEec
Confidence 999999999988765543 34455555544321 2224556778888999999998766666543
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.94 E-value=7.7e-25 Score=197.08 Aligned_cols=209 Identities=19% Similarity=0.234 Sum_probs=156.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
+.++||+|||||++|+++|+.|+++|++|+||||.+.+...+++..+.+++.++|+.+|+++++... .......+ .
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~-~~~~~~~~---~ 84 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQGHF---G 84 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC-CBCCEEEE---T
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc-cccccccc---c
Confidence 4578999999999999999999999999999999998877888999999999999999999888654 22111111 1
Q ss_pred CcEEEEecCCCCCCC-cceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCC---EEEcCEEEec
Q 022652 136 GRELRSFGFKDEDAS-QEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT---RIYANIVIGC 209 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~---~~~ad~vV~A 209 (294)
+. .+++...... .....+.+..+.+.|.+.+ .+++++++++|++++.++++ +.|++.++. ++++|+||+|
T Consensus 85 ~~---~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v~v~~~~~~g~~~~~a~~vVgA 160 (500)
T 2qa1_A 85 GL---PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-VTVEVRGPEGKHTLRAAYLVGC 160 (500)
T ss_dssp TE---EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEEC
T ss_pred ce---ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-EEEEEEcCCCCEEEEeCEEEEC
Confidence 11 1222211111 2346789999999998876 48999999999999998887 447777764 7999999999
Q ss_pred CCCCcHhhhhcCCCCCccc-cceEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEE
Q 022652 210 DGIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICH 275 (294)
Q Consensus 210 ~G~~S~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 275 (294)
||.+|.+|+.+|+..+... .+..+.+.+.... .+....+++.++++++++|++++.+.+++..
T Consensus 161 DG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~ 224 (500)
T 2qa1_A 161 DGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE---LQPRMIGETLPGGMVMVGPLPGGITRIIVCE 224 (500)
T ss_dssp CCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC---CCCEEEEEEETTEEEEEEEETTTEEEEEEEE
T ss_pred CCcchHHHHHcCCCcCCCccceEEEEEEEEeCC---CCCceEEEECCCcEEEEEEcCCCEEEEEEEc
Confidence 9999999999988766543 3445555554432 1222456677888899999999876666554
No 7
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.94 E-value=6.5e-25 Score=192.61 Aligned_cols=220 Identities=21% Similarity=0.219 Sum_probs=164.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC--CcCceEEEcc-cHHHHHHHcCCchhHHhccccccceEEE
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR--TGGTSLTLFK-NGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~--~~g~~~~~~~-~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 132 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.+. ..|.++.+.+ .+.+.|+.+|+++.+......... .++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 456899999999999999999999999999999987653 2455666664 568999999999988765554444 555
Q ss_pred cCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCC
Q 022652 133 SEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (294)
...+........... .......+.|..|.+.|.+.+.+++++++++|++++.++++ +.|++.+|+++++|+||+|||.
T Consensus 103 ~~~g~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~-v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 103 DEKGNILSTKNVKPE-NRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK-WTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp CSSSEEEEECCCGGG-TTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS-EEEEETTSCCEEESEEEECSCT
T ss_pred CCCCCchhhcccccc-CCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE-EEEEECCCcEEecCEEEECCCc
Confidence 555654433210111 11223468999999999999877899999999999988776 5589999988999999999999
Q ss_pred CcHhhhhcCCCCCccccceEEEEEEeCCCC--CC----CCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCC
Q 022652 213 RSPIAKWIGFSEPKYVGHCAYRGLGYYPNG--QP----FEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNP 278 (294)
Q Consensus 213 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 278 (294)
+|.+|+.++...+.+.++..+++.+..... .. ......++++++..++++|.+++...|++.+..+
T Consensus 181 ~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 252 (398)
T 2xdo_A 181 MSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTP 252 (398)
T ss_dssp TCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECC
T ss_pred chhHHhhccCCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecC
Confidence 999999997666777777777766542110 00 1223445567888888899999888887766543
No 8
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.93 E-value=4.4e-24 Score=188.06 Aligned_cols=206 Identities=22% Similarity=0.321 Sum_probs=157.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~-V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
..+||+|||||++|+++|+.|+++|++ |+|+|+.+.+...+.++.+.+++.+.|+.+|+++.+.........+.+....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 358999999999999999999999999 9999999888778889999999999999999999888776666677777776
Q ss_pred CcEEEEecCCC-CCCCcceeeeeHHHHHHHHHhcCC---C-CceEeCCceeEEEEcCCceEEEEecC---C--CEEEcCE
Q 022652 136 GRELRSFGFKD-EDASQEVRAVERRILLETLANQLP---P-ESVQFSSELAKIETSGNGVTILELVN---G--TRIYANI 205 (294)
Q Consensus 136 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~---~-v~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~ 205 (294)
+.......... .........+.|..|.+.|.+.+. + ++++++++|+++.. +++ +.|.+.+ | +++.||+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESE
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCE
Confidence 76554433211 112233567899999999988762 4 58999999999988 666 4477665 6 4799999
Q ss_pred EEecCCCCcHhhhhcCCC--CCccccceEEEEEEeCCCCCCCCCceEEEEeC--CeEEEEEEcCC
Q 022652 206 VIGCDGIRSPIAKWIGFS--EPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGR--GVRAGYVPVSP 266 (294)
Q Consensus 206 vV~A~G~~S~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~ 266 (294)
||+|||.+|.+|+.++.. .+.+.+...|+++...... ..+...++++. +.+++++|+++
T Consensus 161 vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~ 223 (410)
T 3c96_A 161 LVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISA 223 (410)
T ss_dssp EEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCH
T ss_pred EEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCC
Confidence 999999999999999644 3456666777777654322 12333445553 66788999863
No 9
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.93 E-value=9.7e-24 Score=192.18 Aligned_cols=212 Identities=20% Similarity=0.243 Sum_probs=152.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccc----eEE
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKG----MAV 131 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~----~~~ 131 (294)
...+||+|||||++|+++|+.|+++|++|+||||.+.+...+++..+.+++.++++.+|+.+.+......... ..+
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEe
Confidence 3468999999999999999999999999999999998877888899999999999999999988776554432 222
Q ss_pred EcCCCcEEEEecCCCC-------CCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---C--C
Q 022652 132 KSEDGRELRSFGFKDE-------DASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---G--T 199 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g--~ 199 (294)
....+..+..+++... ..+.....+.+..+.+.|.+.+... ++++++|++++.+++++ .+++.+ | .
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHV-RATITDLRTGATR 181 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCE-EEEEEETTTCCEE
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEE-EEEEEECCCCCEE
Confidence 2344555544444221 1223456788999999998877433 99999999999988774 366654 6 3
Q ss_pred EEEcCEEEecCCCCcHhhhhcCCCCCcccc-ceEEEEEEeCCCCC----CCCCceEEEEeCC-eEEEEEEcCCCeE
Q 022652 200 RIYANIVIGCDGIRSPIAKWIGFSEPKYVG-HCAYRGLGYYPNGQ----PFEPKLNYIYGRG-VRAGYVPVSPTKV 269 (294)
Q Consensus 200 ~~~ad~vV~A~G~~S~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~p~~~~~~ 269 (294)
+++||+||+|||.+|.+|+.+|+..+.... ...+...+..+... .......++++++ ..++++|++++..
T Consensus 182 ~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~ 257 (549)
T 2r0c_A 182 AVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRGL 257 (549)
T ss_dssp EEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSSE
T ss_pred EEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCcE
Confidence 799999999999999999999887655432 22333333332110 0112334444555 7788999976543
No 10
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.93 E-value=4.8e-24 Score=186.47 Aligned_cols=220 Identities=17% Similarity=0.151 Sum_probs=148.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCc-CceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG-GTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~-g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
+.|||+||||||+|+++|+.|+++|++|+||||++.++.. ..+..+++ ..++.+++............+..+..+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 4699999999999999999999999999999998876432 12333443 5677888765544444556667777665
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec-CC--CEEEcCEEEecC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANIVIGCD 210 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~vV~A~ 210 (294)
+.......... ......+.++|..+.+.|.+.+ .|++++++++|+++..+++.+..+... ++ .+++||+||+||
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAd 158 (397)
T 3oz2_A 80 EKRPIILQSEK-AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp CSSCEEEECSS-SSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CceEeeccccc-cCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCC
Confidence 55433333222 2234456799999999998877 489999999999999888765544433 33 368999999999
Q ss_pred CCCcHhhhhcCCCCCccccceEEEE-EEeCCCCCCCCCceEEEEe---CCeEEEEEEcCCCeEEEEEEEcCCCC
Q 022652 211 GIRSPIAKWIGFSEPKYVGHCAYRG-LGYYPNGQPFEPKLNYIYG---RGVRAGYVPVSPTKVYWFICHNNPTP 280 (294)
Q Consensus 211 G~~S~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~ 280 (294)
|.+|.+|+.+++..+.......... ..........++...++++ ++.+.|++|..++...+.+.......
T Consensus 159 G~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~ 232 (397)
T 3oz2_A 159 GFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI 232 (397)
T ss_dssp CTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS
T ss_pred ccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchh
Confidence 9999999999876543322221111 1111111111233344443 46788999999988777665554443
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.93 E-value=2.6e-24 Score=195.75 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=156.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccce------E
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGM------A 130 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~------~ 130 (294)
.++||+|||||++|+++|+.|+++|++|+||||.+.+...+++..+.+++.++++.+|+++++.......... .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 4689999999999999999999999999999999988778888899999999999999999988765544332 3
Q ss_pred EEcCCCcEEEEecCC--------CCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCC----ceEEEEec
Q 022652 131 VKSEDGRELRSFGFK--------DEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGN----GVTILELV 196 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~----~~~~v~~~ 196 (294)
.....+..+..+... ....+.....+.+..|.+.|.+.+ .|++++++++|++++.+++ + +.+.+.
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~-v~v~~~ 162 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAG-VTARLA 162 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSE-EEEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCcccc-EEEEEE
Confidence 333445544422111 111233356789999999998877 4899999999999998877 5 457777
Q ss_pred CC---CEEEcCEEEecCCCCcHhhhhcCCCCCccccceEEEEE-EeCCCCCC--CC-CceEEEEeCCeEEEEEEcCCCeE
Q 022652 197 NG---TRIYANIVIGCDGIRSPIAKWIGFSEPKYVGHCAYRGL-GYYPNGQP--FE-PKLNYIYGRGVRAGYVPVSPTKV 269 (294)
Q Consensus 197 ~g---~~~~ad~vV~A~G~~S~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~-~~~~~~~~~~~~~~~~p~~~~~~ 269 (294)
++ .+++||+||+|||.+|.+|+.+|+..+.......+..+ ........ .. ....+++.++...+++|++++..
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~ 242 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPTDRPDR 242 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEECSSTTE
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEecCCCE
Confidence 65 67999999999999999999998876544322222211 12111111 11 23455556777788999987544
Q ss_pred EEEEE
Q 022652 270 YWFIC 274 (294)
Q Consensus 270 ~~~~~ 274 (294)
+.+++
T Consensus 243 ~~~~~ 247 (535)
T 3ihg_A 243 HTLFV 247 (535)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44333
No 12
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.93 E-value=7.2e-24 Score=185.70 Aligned_cols=216 Identities=16% Similarity=0.129 Sum_probs=150.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC-cCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT-GGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~-~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
++||+|||||++|+++|+.|+++|++|+|+|+.+.++. ...+..+. .+.++.+|+++..........++.+....+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLS---KGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEE---THHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccC---HHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 58999999999999999999999999999999986532 22222232 467888998766444455566777777665
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec---CCCEEEcCEEEecCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGTRIYANIVIGCDG 211 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~ad~vV~A~G 211 (294)
.....+..... .....+.+++..|.+.|.+.+ .|++++++++|+++..+++++.+|.+. ++.+++||+||+|+|
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G 159 (397)
T 3cgv_A 81 KRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp SSCEEEC------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCC
Confidence 54222222211 133466799999999998877 489999999999999887764446663 455899999999999
Q ss_pred CCcHhhhhcCCCC-Cccccc--eEEEEEEeCCCCCCCCCceEEEE---eCCeEEEEEEcCCCeEEEEEEEcCCC
Q 022652 212 IRSPIAKWIGFSE-PKYVGH--CAYRGLGYYPNGQPFEPKLNYIY---GRGVRAGYVPVSPTKVYWFICHNNPT 279 (294)
Q Consensus 212 ~~S~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~ 279 (294)
.+|.+++.+++.. +..... .++......... + ++...+++ .++++.|++|..++...+.+......
T Consensus 160 ~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~ 231 (397)
T 3cgv_A 160 FESEFGRWAGLKSVILARNDIISALQYRMINVDV-D-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINW 231 (397)
T ss_dssp TTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCC-C-TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTT
T ss_pred cchHhHHhcCCCccCCChhheeEEEEEEeccCCC-C-CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEecccc
Confidence 9999999998776 322211 122222222211 1 23344454 46789999999999877777665544
No 13
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.92 E-value=3.9e-24 Score=187.43 Aligned_cols=217 Identities=16% Similarity=0.177 Sum_probs=148.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC--CCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL--RTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~--~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
++||+|||||++|+++|+.|+++|++|+|+|+.+.+ ....++..+.+++.+.|+.+|+++.+.........+.+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 479999999999999999999999999999998752 112223358899999999999999988766666666665432
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEe-cCCC--EEEcCEEEecC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCD 210 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~ 210 (294)
. ...+++...........+.+..+.+.|.+.+ .+++++++++|+++..++++.+.|.+ .+|+ ++++|+||+||
T Consensus 82 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 82 Q--RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp E--EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred c--eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 2 1222222111123455677888888887766 48999999999999876433345777 6776 69999999999
Q ss_pred CCCcHhhhhcCCC-CCccccc--eEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcCC
Q 022652 211 GIRSPIAKWIGFS-EPKYVGH--CAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNNP 278 (294)
Q Consensus 211 G~~S~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 278 (294)
|.+|.+|+.++.. .+.+.+. ..+.++....+.. .....+..+++.++++.|..++...|++.....
T Consensus 160 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T 1k0i_A 160 GFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV--SHELIYANHPRGFALCSQRSATRSQYYVQVPLS 228 (394)
T ss_dssp CTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS--CSSCEEECCTTCCEEEEEEETTEEEEEEEECTT
T ss_pred CCCcHHHHhcCccccccccccccceeEEEecCCCCC--ccceEEEEcCCceEEEEecCCCcEEEEEEeCCC
Confidence 9999999999754 2333332 2344443322111 122333344566776667666777776665543
No 14
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.92 E-value=1.2e-23 Score=185.71 Aligned_cols=218 Identities=21% Similarity=0.222 Sum_probs=155.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccc-cceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEI-KGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~-~~~~~~~~~ 135 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.++ .+.+..+.+.....++.+|+++.+....... .+..+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-- 80 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR-FVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVR-- 80 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEE--
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEe--
Confidence 35899999999999999999999999999999997654 3556678889999999999998887654332 2333332
Q ss_pred CcEEEEecCCCC--CCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCce-EEEEecCCC--EEEcCEEEe
Q 022652 136 GRELRSFGFKDE--DASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGV-TILELVNGT--RIYANIVIG 208 (294)
Q Consensus 136 ~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~-~~v~~~~g~--~~~ad~vV~ 208 (294)
+.....+++... ........+++..+.+.|.+.+ .|++++++++|+++..++++. +.+.+.+|+ +++||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 81 GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 223333444322 2234456799999999998877 489999999999999887653 456678887 699999999
Q ss_pred cCCCCcHhhhhcCCCCCcc-ccceEEEEEEeCCC-CCCCC-CceEEEE---eCCeEEEEEEcCCCeEEEEEEEcC
Q 022652 209 CDGIRSPIAKWIGFSEPKY-VGHCAYRGLGYYPN-GQPFE-PKLNYIY---GRGVRAGYVPVSPTKVYWFICHNN 277 (294)
Q Consensus 209 A~G~~S~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~ 277 (294)
|+|.+|.+++.++...+.. ....++........ ...++ +...+.+ ..+.++|++|++++...+.+....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~ 235 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEP 235 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECH
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecH
Confidence 9999999999998775543 33444443333321 11221 2222333 367899999999998877776543
No 15
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.92 E-value=1.4e-23 Score=194.60 Aligned_cols=219 Identities=18% Similarity=0.211 Sum_probs=157.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-----cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-----LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAV 131 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-----~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 131 (294)
..+||+|||||++||++|+.|++ .|++|+||||.+.+...+++..+.++++++|+.+|+++.+.........+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 36899999999999999999999 9999999999988777899999999999999999999999877777777777
Q ss_pred EcCC--CcEEE--EecCC-CCCCCcceeeeeHHHHHHHHHhcCC--C---CceEeCCceeEEEEcC--------CceEEE
Q 022652 132 KSED--GRELR--SFGFK-DEDASQEVRAVERRILLETLANQLP--P---ESVQFSSELAKIETSG--------NGVTIL 193 (294)
Q Consensus 132 ~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~--~---v~i~~~~~v~~i~~~~--------~~~~~v 193 (294)
+... +.... .+... ..........+.+..+.+.|.+.+. + ++++++++|++++.++ ++ +.+
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~-V~v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP-VTM 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC-EEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC-EEE
Confidence 6643 32221 12111 1112333456899999999988772 3 8999999999998875 24 445
Q ss_pred Eec------------------------------------------CC--CEEEcCEEEecCCCCcHhhhhcCCCCCcccc
Q 022652 194 ELV------------------------------------------NG--TRIYANIVIGCDGIRSPIAKWIGFSEPKYVG 229 (294)
Q Consensus 194 ~~~------------------------------------------~g--~~~~ad~vV~A~G~~S~~~~~~~~~~~~~~~ 229 (294)
.+. +| ++++||+||+|||++|.+|+++|+..+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~ 245 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQT 245 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCc
Confidence 442 34 4689999999999999999999887654433
Q ss_pred ceEEEEEEeCC--CCCC-CCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022652 230 HCAYRGLGYYP--NGQP-FEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNN 277 (294)
Q Consensus 230 ~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (294)
...| ++.... ...+ ......++..++++++++|+.++.+.+++..+.
T Consensus 246 ~~~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~ 295 (665)
T 1pn0_A 246 DYIW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQA 295 (665)
T ss_dssp EEEE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC
T ss_pred cEEE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCC
Confidence 3333 343321 1111 112222222356778899999987666665544
No 16
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.92 E-value=9.8e-24 Score=185.56 Aligned_cols=181 Identities=21% Similarity=0.208 Sum_probs=134.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC--cCceEEEcccHHHHHHHcCCchhHHhccc----cccceEEE
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRSQFL----EIKGMAVK 132 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~--~g~~~~~~~~~~~~l~~lg~~~~~~~~~~----~~~~~~~~ 132 (294)
.+|+||||||+||++|+.|+++|++|+||||.+.+.. .|.++.+.+++.+.|+++|+.+.+..... ......+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 4799999999999999999999999999999887653 47788999999999999999876643211 11122333
Q ss_pred cCCCcEEEEecC----CCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEe
Q 022652 133 SEDGRELRSFGF----KDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIG 208 (294)
Q Consensus 133 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~ 208 (294)
...+........ ...........+.|.+|.+.|.+.+ +..|+++++|++++..+++.+.|+++||+++++|+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~-~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL-ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC-TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc-cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEE
Confidence 333332221110 1112233445789999999999887 45799999999999877765779999999999999999
Q ss_pred cCCCCcHhhhhcCCC-CCccccceEEEEEEeCC
Q 022652 209 CDGIRSPIAKWIGFS-EPKYVGHCAYRGLGYYP 240 (294)
Q Consensus 209 A~G~~S~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (294)
|||.+|.+|+.++.. .+.+.++..+.+.....
T Consensus 161 ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~ 193 (412)
T 4hb9_A 161 ADGSNSKVRKQYLPFIERFDVGVSMIIGRARLT 193 (412)
T ss_dssp CCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECC
T ss_pred CCCCCcchHHHhCCCccccccceeEEEEEEecc
Confidence 999999999999655 44456777777766553
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.92 E-value=1.6e-23 Score=189.32 Aligned_cols=220 Identities=16% Similarity=0.127 Sum_probs=153.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHH-HHHHcCCchhHHhccccccceEEEc-C
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWS-VLDALGVGSDLRSQFLEIKGMAVKS-E 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~-~l~~lg~~~~~~~~~~~~~~~~~~~-~ 134 (294)
.++||+|||||++|+++|+.|+++|++|+|||+.+.+. .+.+..+.+.... +++.+|+++.+.............. .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR-HQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC-CCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC-CCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 45899999999999999999999999999999998543 2334455565544 8899999988776544433322222 1
Q ss_pred CC--cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEE--EEecCCC--EEEcCEE
Q 022652 135 DG--RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTI--LELVNGT--RIYANIV 206 (294)
Q Consensus 135 ~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~--v~~~~g~--~~~ad~v 206 (294)
.. .....+...........+.+++..|.+.|.+.+ .|++++++++|+++..+++++.. +...+|+ +++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 11 111122222222334466789999999998877 58999999999999988776433 4445674 7999999
Q ss_pred EecCCCCcHhhhhcCCCC-CccccceEEEEEEeCCC--CCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022652 207 IGCDGIRSPIAKWIGFSE-PKYVGHCAYRGLGYYPN--GQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNN 277 (294)
Q Consensus 207 V~A~G~~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (294)
|+|+|.+|.+|+.++... ..+....++.++..... ..+........+.+++++|++|++++...+.+.+..
T Consensus 165 I~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~ 238 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSR 238 (512)
T ss_dssp EECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEH
T ss_pred EECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecH
Confidence 999999999999996542 22344566666555322 222334455566678899999999998777766643
No 18
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.91 E-value=3.6e-23 Score=191.52 Aligned_cols=218 Identities=18% Similarity=0.235 Sum_probs=154.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
..+||+|||||++||++|+.|++ .|++|+||||.+.+...+++..+.++++++++.+|+.+.+.........+.++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 99999999999988888899999999999999999999887766666666666532
Q ss_pred ----CcEEE--EecCCC-CCCCcceeeeeHHHHHHHHHhcC--CCC--ceEeCCceeEEEEcCC---ceEEEEec-----
Q 022652 136 ----GRELR--SFGFKD-EDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN---GVTILELV----- 196 (294)
Q Consensus 136 ----~~~~~--~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~--~~v--~i~~~~~v~~i~~~~~---~~~~v~~~----- 196 (294)
+.... .++... .........+.+..+.+.|.+.+ .++ +|+++++|++++.+++ ..+.|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 33221 122111 11233456788999999998877 344 9999999999998763 13446654
Q ss_pred -CC--CEEEcCEEEecCCCCcHhhhhcCCCCCccccceEEEEEEeCC--CCCC-CCCceEEEEeCCeEEEEEEcCCC-eE
Q 022652 197 -NG--TRIYANIVIGCDGIRSPIAKWIGFSEPKYVGHCAYRGLGYYP--NGQP-FEPKLNYIYGRGVRAGYVPVSPT-KV 269 (294)
Q Consensus 197 -~g--~~~~ad~vV~A~G~~S~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~p~~~~-~~ 269 (294)
+| ++++||+||+|||.+|.+|+.+|+..+.......| ++.... ...+ ......+.. ++++++++|+.++ .+
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~g~~~~~P~~~~~~~ 268 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAW-GVMDVLAVTDFPDVRYKVAIQS-EQGNVLIIPREGGHLV 268 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCE-EEEEEEEEECCTTTTSEEEEEE-TTEEEEEEECTTSSCE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceE-EEEEEEEccCCCccceeEEEEc-CCceEEEEEcCCCcEE
Confidence 45 47999999999999999999998876544333333 222211 1111 112222222 6778889999988 55
Q ss_pred EEEEEEc
Q 022652 270 YWFICHN 276 (294)
Q Consensus 270 ~~~~~~~ 276 (294)
.+++...
T Consensus 269 r~~~~~~ 275 (639)
T 2dkh_A 269 RFYVEMD 275 (639)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 5555443
No 19
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.91 E-value=3.4e-24 Score=195.38 Aligned_cols=213 Identities=20% Similarity=0.179 Sum_probs=145.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|||+.+.+...+++..+.+++.++|+.+|+++.+...........+ .+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~---~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPF---AG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCB---TT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCcee---CC
Confidence 468999999999999999999999999999999998877888999999999999999999988765443321100 11
Q ss_pred cEEEEecCCCCCC-CcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEe--cCC-CEEEcCEEEecC
Q 022652 137 RELRSFGFKDEDA-SQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL--VNG-TRIYANIVIGCD 210 (294)
Q Consensus 137 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~--~~g-~~~~ad~vV~A~ 210 (294)
.....+++..... ......+.+..+.+.|.+.+ .|++|+++++|++++.+++++ .|++ .+| ++++||+||+||
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v-~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAV-EVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCE-EEEEEETTEEEEEEESEEEECS
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeE-EEEEEeCCCcEEEEeCEEEEcC
Confidence 1000111111111 12345688999999998877 388999999999999888774 4666 677 689999999999
Q ss_pred CCCcHhhhhcCCCCCccc-cceEEEEEEeCCCCCCCCCceEEEEeCCeEEEE-EEcCCCeE-EEEEEEc
Q 022652 211 GIRSPIAKWIGFSEPKYV-GHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGY-VPVSPTKV-YWFICHN 276 (294)
Q Consensus 211 G~~S~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~ 276 (294)
|.+|.+|+.+|+..+... .+..+........ +. ....+.....+++++ +|++++.. .++++..
T Consensus 204 G~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~--~~-~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 204 GGRSTVRRLAADRFPGTEATVRALIGYVTTPE--RE-VPRRWERTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp CSSCHHHHHTTCCCCCCCCCEEEEEEECCCCS--CS-SCCCCCCCCSSCEEECCCC------CEEEEEE
T ss_pred CCCchHHHHcCCCCccceeeeEEEEEEEEecC--CC-cceEEEecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999999999988766543 3444433333322 21 112223344455555 79998866 5555544
No 20
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.91 E-value=1.3e-22 Score=185.35 Aligned_cols=220 Identities=15% Similarity=0.183 Sum_probs=154.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccc-cceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEI-KGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~-~~~~~~~~~ 135 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+. .+.+..+.+.+.+.++.+|+++.+....... ....+....
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~-~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR-YRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC-CCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC-CceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 46899999999999999999999999999999997554 3456778899999999999998876544322 222222222
Q ss_pred CcEEEEecCCCCC----CCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec-CC--CEEEcCEE
Q 022652 136 GRELRSFGFKDED----ASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANIV 206 (294)
Q Consensus 136 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~v 206 (294)
......+.+.... .......+++..|.+.|.+.+ .|++++++++|+++..+++.++.|.+. +| .++.||+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 2111122222111 123456789999999998877 589999999999999875555678877 66 47999999
Q ss_pred EecCCCCcHhhhhcCCCCCcc-ccceEEEEEEeCC--CCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEcC
Q 022652 207 IGCDGIRSPIAKWIGFSEPKY-VGHCAYRGLGYYP--NGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHNN 277 (294)
Q Consensus 207 V~A~G~~S~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 277 (294)
|+|+|.+|.+++.++...+.. ....++....... ...+........+.+++++|++|++++.+.+.+....
T Consensus 181 V~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~ 254 (591)
T 3i3l_A 181 IDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDR 254 (591)
T ss_dssp EECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEG
T ss_pred EECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCH
Confidence 999999999999997764322 1122222222221 1223334455566788899999999987777666544
No 21
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.90 E-value=2.7e-22 Score=178.84 Aligned_cols=212 Identities=17% Similarity=0.140 Sum_probs=145.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC--cCceEEEcccHHHHHHHcCCchhHHh-ccccccceEEEc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRS-QFLEIKGMAVKS 133 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~--~g~~~~~~~~~~~~l~~lg~~~~~~~-~~~~~~~~~~~~ 133 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.+.. ...+..+ +.+.++.+|+...... ......+..++.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 358999999999999999999999999999999876431 1122223 4678888887654322 122333444544
Q ss_pred CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEE
Q 022652 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIV 206 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~v 206 (294)
+.+.....+ ......++|..|.+.|.+.+ .|++++++++|+++..+++++++|.+. +|+ +++||+|
T Consensus 82 ~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~V 154 (453)
T 3atr_A 82 PDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVV 154 (453)
T ss_dssp TTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEE
T ss_pred CCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEE
Confidence 443221111 12345789999999998876 589999999999999887765445554 665 7999999
Q ss_pred EecCCCCcHhhhhcCCCCC----cc--ccceEEEEEEeCCCCCCCCCceEEEEe----CCeEEEEEEcCCCeEEEEEEEc
Q 022652 207 IGCDGIRSPIAKWIGFSEP----KY--VGHCAYRGLGYYPNGQPFEPKLNYIYG----RGVRAGYVPVSPTKVYWFICHN 276 (294)
Q Consensus 207 V~A~G~~S~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~ 276 (294)
|+|+|.+|.+++.++...| .+ ....++++..........+.....+++ +++++|++|..++.+.+.+.+.
T Consensus 155 V~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~ 234 (453)
T 3atr_A 155 VEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQ 234 (453)
T ss_dssp EECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEE
T ss_pred EECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEec
Confidence 9999999999999976542 12 234566665554432211233344553 5678999999999877766665
Q ss_pred CC
Q 022652 277 NP 278 (294)
Q Consensus 277 ~~ 278 (294)
..
T Consensus 235 ~~ 236 (453)
T 3atr_A 235 GG 236 (453)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.85 E-value=7.7e-19 Score=159.26 Aligned_cols=211 Identities=16% Similarity=0.131 Sum_probs=140.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH------------cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchh--HHhc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR------------LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSD--LRSQ 122 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~------------~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~--~~~~ 122 (294)
..+||+|||||++|+++|..|++ .|++|+|||+.+.+. .+.+..+.++..++++.+|+.+. +...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~-~g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT-IGVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC-CCSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC-cceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 46899999999999999999999 999999999976544 44477888999999999999986 4433
Q ss_pred c-ccccceEEEcCC-------CcE-EEEec---------CC----------------------------------CC--C
Q 022652 123 F-LEIKGMAVKSED-------GRE-LRSFG---------FK----------------------------------DE--D 148 (294)
Q Consensus 123 ~-~~~~~~~~~~~~-------~~~-~~~~~---------~~----------------------------------~~--~ 148 (294)
. ....++.+.... +.. ...+. +. .. .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 2 222233333211 111 11110 00 00 0
Q ss_pred CCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCc-eEEEEecCCCEEEcCEEEecCCCCcHh-hhhcCCC
Q 022652 149 ASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPI-AKWIGFS 223 (294)
Q Consensus 149 ~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~S~~-~~~~~~~ 223 (294)
.......+++..|.+.|.+.+ .|++++++ +|+++..++++ ++.|.+.+|.+++||+||+|+|.+|.+ ++.++..
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 112346789999999998765 48999999 69999887655 346788887789999999999999998 6666765
Q ss_pred CCcc----ccceEEEEEEeCCCC-CCCCCceEEEEeCCeEEEEEEcCCCeE
Q 022652 224 EPKY----VGHCAYRGLGYYPNG-QPFEPKLNYIYGRGVRAGYVPVSPTKV 269 (294)
Q Consensus 224 ~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~ 269 (294)
...+ .....+......... .+........+...+++|++|++++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~ 294 (526)
T 2pyx_A 244 FLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKG 294 (526)
T ss_dssp EEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEE
T ss_pred cccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceE
Confidence 3222 122333323333321 122233334456777899999988533
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.84 E-value=1e-18 Score=159.98 Aligned_cols=216 Identities=17% Similarity=0.125 Sum_probs=134.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc------CCceEEEecCCCCCC-cCceEEEcccHHHHHHHcCCchhHHhccccc--
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRL------GIGSLVIEQADSLRT-GGTSLTLFKNGWSVLDALGVGSDLRSQFLEI-- 126 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~------G~~V~vlE~~~~~~~-~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~-- 126 (294)
...+||+|||||++|+++|+.|+++ |++|+||||.+.++. ...+..+.+++++.| ++ ++.....+.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~---~~~~~g~~~~~ 107 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FP---DWKEKGAPLNT 107 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CT---THHHHTCCCCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HH---HHHhcCCceee
Confidence 3468999999999999999999999 999999999987653 234455777666554 22 222111111
Q ss_pred ----cceEEEcCCCcEEEEecCCC--CCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCc-eEEEEecC
Q 022652 127 ----KGMAVKSEDGRELRSFGFKD--EDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNG-VTILELVN 197 (294)
Q Consensus 127 ----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~-~~~v~~~~ 197 (294)
..+.+....+. ..++... .......+.+.+..|.+.|.+.+ .|++|+++++|+++..++++ +++|.+.+
T Consensus 108 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~ 185 (584)
T 2gmh_A 108 PVTEDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATND 185 (584)
T ss_dssp ECCEEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECC
T ss_pred eechhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCC
Confidence 12223332211 1122111 11122356789999999998877 48999999999999987754 45577653
Q ss_pred ------C---------CEEEcCEEEecCCCCcHhhhhc----CCCCCccccce--EEEEEEeCCCCCCCCCceEEEEe--
Q 022652 198 ------G---------TRIYANIVIGCDGIRSPIAKWI----GFSEPKYVGHC--AYRGLGYYPNGQPFEPKLNYIYG-- 254 (294)
Q Consensus 198 ------g---------~~~~ad~vV~A~G~~S~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 254 (294)
| .++.||+||+|+|.+|.+|+.+ ++.....+... .++.+...+......+...++++
T Consensus 186 ~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~ 265 (584)
T 2gmh_A 186 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWP 265 (584)
T ss_dssp EEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETT
T ss_pred ccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEecc
Confidence 3 5799999999999999999887 55432222111 23333333322222233344432
Q ss_pred ----CCeEEEEEEcC--CCeEEEEEEEcCC
Q 022652 255 ----RGVRAGYVPVS--PTKVYWFICHNNP 278 (294)
Q Consensus 255 ----~~~~~~~~p~~--~~~~~~~~~~~~~ 278 (294)
.....+++|.. ++.+.+.+.....
T Consensus 266 ~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~ 295 (584)
T 2gmh_A 266 LDRHTYGGSFLYHLNEGEPLLALGFVVGLD 295 (584)
T ss_dssp SCTTSCEEEEEEECCSSSCEEEEEEEEETT
T ss_pred ccCCcCCceEEEEecCCCCeEEEEEEEecC
Confidence 12335678888 7777776665443
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.84 E-value=6.6e-19 Score=159.29 Aligned_cols=216 Identities=16% Similarity=0.121 Sum_probs=135.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchh--HHhccccc-cceEE
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSD--LRSQFLEI-KGMAV 131 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~--~~~~~~~~-~~~~~ 131 (294)
.+||+|||||++|+++|+.|++ +|++|+|||+.+.+ ..+.+..+.+....+++.+|+.+. +....... .++.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~-~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVR-RIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCC-ceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 4799999999999999999999 99999999998643 345567778888899999999875 33322111 11222
Q ss_pred EcC--CCcE-EEEe------------------------------------------------cC----C------C--CC
Q 022652 132 KSE--DGRE-LRSF------------------------------------------------GF----K------D--ED 148 (294)
Q Consensus 132 ~~~--~~~~-~~~~------------------------------------------------~~----~------~--~~ 148 (294)
... .+.. ...+ .+ . . ..
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 110 0000 0000 00 0 0 00
Q ss_pred C--CcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCc-eEEEEecCCCEEEcCEEEecCCCCcHhhh-hcCC
Q 022652 149 A--SQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPIAK-WIGF 222 (294)
Q Consensus 149 ~--~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~S~~~~-~~~~ 222 (294)
. ......+++..|.+.|.+.+ .|++++++ +|+++..++++ ++.|.+.+|+++++|+||+|+|.+|.+++ .++.
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCC
Confidence 0 22346789999999998876 58999999 99999986554 45688888888999999999999999854 4465
Q ss_pred CCCc----cccceEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022652 223 SEPK----YVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (294)
Q Consensus 223 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (294)
.... .+...++.....................+++++|++|+++ ...+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~ 296 (511)
T 2weu_A 240 RFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYS 296 (511)
T ss_dssp CEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEEC
T ss_pred CCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEEC
Confidence 4321 1222233222333221112233344566778999999988 444444443
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.83 E-value=2.4e-18 Score=156.46 Aligned_cols=216 Identities=17% Similarity=0.150 Sum_probs=137.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCCCCcCceEEEcccHHH-HHHHcCCchh--HHhccccc-cce
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWS-VLDALGVGSD--LRSQFLEI-KGM 129 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~~~~g~~~~~~~~~~~-~l~~lg~~~~--~~~~~~~~-~~~ 129 (294)
..+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.+..+.+.... +++.+|+.+. +....... .++
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~ 82 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR-IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAI 82 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC-CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC-cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCc
Confidence 46899999999999999999999 999999999976443 4456778888888 9999999865 33221111 111
Q ss_pred EEEcCC-------CcE-EEEec---------C------------CCC------------------------CCCcceeee
Q 022652 130 AVKSED-------GRE-LRSFG---------F------------KDE------------------------DASQEVRAV 156 (294)
Q Consensus 130 ~~~~~~-------~~~-~~~~~---------~------------~~~------------------------~~~~~~~~~ 156 (294)
.+.... +.. ..... + ... ........+
T Consensus 83 ~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i 162 (538)
T 2aqj_A 83 KFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHF 162 (538)
T ss_dssp EEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEE
T ss_pred cccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEE
Confidence 221110 000 00000 0 000 001234678
Q ss_pred eHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCc-eEEEEecCCCEEEcCEEEecCCCCcHhhhh-cCCCCCccc----
Q 022652 157 ERRILLETLANQL--PPESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPIAKW-IGFSEPKYV---- 228 (294)
Q Consensus 157 ~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~-~~~~~~~~~---- 228 (294)
++..|.+.|.+.+ .|++++++ +|+++..++++ ++.|.+.+|+++.+|+||+|+|.+|.+++. ++.....+.
T Consensus 163 ~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~ 241 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLL 241 (538)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCC
T ss_pred eHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccc
Confidence 9999999998877 58999999 89999886654 456888888889999999999999998554 455432221
Q ss_pred cceEEEEEEeCCCC-CCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEE
Q 022652 229 GHCAYRGLGYYPNG-QPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICH 275 (294)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 275 (294)
...++......... .............++++|++|++++ ..+.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~ 288 (538)
T 2aqj_A 242 CDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVF 288 (538)
T ss_dssp CCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEE
T ss_pred cceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEE
Confidence 22333322332211 0022222334567789999999885 3333333
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.81 E-value=9e-18 Score=152.94 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=138.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCCCCcCceEEEcccHHH-HHHHcCCchh--HHhccccc-cce
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWS-VLDALGVGSD--LRSQFLEI-KGM 129 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~~~~g~~~~~~~~~~~-~l~~lg~~~~--~~~~~~~~-~~~ 129 (294)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.+. .+.+..+.+...+ +++.+|+.+. +....... .++
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~-~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT-LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC-CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc-cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 46899999999999999999999 999999999976543 3446778888888 9999999876 44322111 222
Q ss_pred EEEcCCCc---------------E-EEEecC----------------------C-C-------------C-------C--
Q 022652 130 AVKSEDGR---------------E-LRSFGF----------------------K-D-------------E-------D-- 148 (294)
Q Consensus 130 ~~~~~~~~---------------~-~~~~~~----------------------~-~-------------~-------~-- 148 (294)
.+...... . ...+.. . . . .
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 22211100 0 000000 0 0 0 0
Q ss_pred -CCcceeeeeHHHHHHHHHhcC--C-CCceEeCCceeEEEEcCCc-eEEEEecCCCEEEcCEEEecCCCCcHh-hhhcCC
Q 022652 149 -ASQEVRAVERRILLETLANQL--P-PESVQFSSELAKIETSGNG-VTILELVNGTRIYANIVIGCDGIRSPI-AKWIGF 222 (294)
Q Consensus 149 -~~~~~~~~~~~~l~~~L~~~~--~-~v~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~ad~vV~A~G~~S~~-~~~~~~ 222 (294)
.....+.+++..+.+.|.+.+ . |++++++ +|+++..++++ ++.|.+.+|+++.||+||+|+|.+|.+ ++.++.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCC
Confidence 022345689999999998877 3 8999999 99999886554 456888888889999999999999998 555565
Q ss_pred CCCccc----cceEEEEEEeCCCC-CCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEE
Q 022652 223 SEPKYV----GHCAYRGLGYYPNG-QPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICH 275 (294)
Q Consensus 223 ~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 275 (294)
....+. ...++......... ............+++++|++|+++ ...+.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~-~~~~g~v~ 318 (550)
T 2e4g_A 262 PFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLG-RFGTGYVY 318 (550)
T ss_dssp CEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSS-EEEEEEEE
T ss_pred CcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCC-ccceEEEE
Confidence 432221 11222222222211 001222334455778899999987 44444443
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.80 E-value=3.5e-19 Score=155.19 Aligned_cols=193 Identities=15% Similarity=0.064 Sum_probs=127.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCc-hh-HHhccccccceEEEcC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVG-SD-LRSQFLEIKGMAVKSE 134 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~-~~-~~~~~~~~~~~~~~~~ 134 (294)
.||+|||||++|+++|+.|+++ |++|+|+|+.+.+...|.++.+.+++.+.+...+++ +. +.........+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 999999999988777788888888776622222233 22 333333344455554
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (294)
.+..+. . ..+.....+.+.+|.+.|.+.+ .|++++++++|++++.. .++.+|+||+|||.
T Consensus 80 ~g~~~~---~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~ 141 (381)
T 3c4a_A 80 HNEPSL---M---STGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGV 141 (381)
T ss_dssp SSSEEE---C---CCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGG
T ss_pred CCeeEE---e---cCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCC
Confidence 343321 0 1123445799999999998877 38999999999888532 12579999999999
Q ss_pred CcHhhhhc----CCCCCccccceEEEEEEeCCCCCCCCCceEEEEeCCeEE--EEEEcCCCeEEEEEEE
Q 022652 213 RSPIAKWI----GFSEPKYVGHCAYRGLGYYPNGQPFEPKLNYIYGRGVRA--GYVPVSPTKVYWFICH 275 (294)
Q Consensus 213 ~S~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~ 275 (294)
+|. |+.+ +...+.+.++.+|++..... ..+ ...+.....+++ .++|++++...+++..
T Consensus 142 ~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~ 205 (381)
T 3c4a_A 142 NHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF--DQM--NLVFRTHGKDIFIAHAYKYSDTMSTFIVEC 205 (381)
T ss_dssp GGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC--SSE--EEEEEEETTEEEEEEEEECSSSCEEEEEEE
T ss_pred Cch-HHhhhhhcCCCcccCCccEEEEecCCCC--Ccc--eeeEeeCCCcEEEEEEEEecCCeEEEEEEC
Confidence 999 9887 33333334556666543321 111 111112233433 3799988876554443
No 28
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.71 E-value=1.2e-15 Score=130.37 Aligned_cols=150 Identities=15% Similarity=0.109 Sum_probs=89.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEE------------c---ccHHHHHHHcCCchhHHhc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTL------------F---KNGWSVLDALGVGSDLRSQ 122 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~------------~---~~~~~~l~~lg~~~~~~~~ 122 (294)
++||+|||||++|+++|+.|+++|++|+||||.+.++........ . +...+.++.+. .. ..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 77 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQ---AQ-GH 77 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHH---HH-TS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHH---hC-CC
Confidence 469999999999999999999999999999999866322111111 1 11122222211 00 00
Q ss_pred cccccceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEE
Q 022652 123 FLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIY 202 (294)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 202 (294)
.............+. +..................+.+.|.+ +++++++++|++++.++++ +.|++.+|+.+.
T Consensus 78 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~-~~v~~~~g~~~~ 149 (336)
T 1yvv_A 78 VAEWTPLLYNFHAGR----LSPSPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEH-WNLLDAEGQNHG 149 (336)
T ss_dssp EEEECCCEEEESSSB----CCCCCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSC-EEEEETTSCEEE
T ss_pred eeeccccceeccCcc----cccCCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCE-EEEEeCCCcCcc
Confidence 001111001101110 00000000111111234456666655 7799999999999988877 568898887664
Q ss_pred -cCEEEecCCCCcHhhhh
Q 022652 203 -ANIVIGCDGIRSPIAKW 219 (294)
Q Consensus 203 -ad~vV~A~G~~S~~~~~ 219 (294)
+|+||+|+|.++..+..
T Consensus 150 ~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 150 PFSHVIIATPAPQASTLL 167 (336)
T ss_dssp EESEEEECSCHHHHGGGG
T ss_pred ccCEEEEcCCHHHHHHhh
Confidence 99999999999988754
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.70 E-value=4.7e-17 Score=146.31 Aligned_cols=141 Identities=17% Similarity=0.155 Sum_probs=105.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
...+||+|||||++|+++|+.|+++|++|+|||+.+.++. .....+.+...+.++.+|+++.....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-~~~~~~~~~~~~~l~~~g~~~~~~~~------------- 155 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-HNVLHLWPFTIHDLRALGAKKFYGRF------------- 155 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-CCEEECCHHHHHHHHTTTHHHHCTTT-------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-CCcccCChhHHHHHHHcCCccccccc-------------
Confidence 3568999999999999999999999999999999987642 35566777788888888765321100
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcC--CceEEEEe--c-CC--CEEEcCEE
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILEL--V-NG--TRIYANIV 206 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~--~~~~~v~~--~-~g--~~~~ad~v 206 (294)
. ......+.+.++.+.|.+.+ .+++++++++|+++..++ +..+.|.+ . +| .++.+|+|
T Consensus 156 ---------~----~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~V 222 (497)
T 2bry_A 156 ---------C----TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVL 222 (497)
T ss_dssp ---------T----CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEE
T ss_pred ---------c----ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEE
Confidence 0 11123467788888887766 589999999999998752 22355666 3 55 46899999
Q ss_pred EecCCCCcHhhhhcCCC
Q 022652 207 IGCDGIRSPIAKWIGFS 223 (294)
Q Consensus 207 V~A~G~~S~~~~~~~~~ 223 (294)
|+|+|.+|.+|...+..
T Consensus 223 V~A~G~~S~~r~~~~~~ 239 (497)
T 2bry_A 223 ISAAGGKFVPEGFTIRE 239 (497)
T ss_dssp EECCCTTCCCTTCEEEE
T ss_pred EECCCCCcccccccchh
Confidence 99999999998766544
No 30
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.70 E-value=6.4e-16 Score=135.47 Aligned_cols=116 Identities=12% Similarity=0.026 Sum_probs=77.8
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc-HhhhhcCCCCCccccce
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFSEPKYVGHC 231 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S-~~~~~~~~~~~~~~~~~ 231 (294)
.++...+.+.|.+.+ .|++++++++|+++..++++++.|.+.+| ++.+|.||+|+|.+| .+++.++...|..+...
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~ 248 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPL 248 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccce
Confidence 356667888887766 48999999999999988777677888888 699999999999998 67777777655443211
Q ss_pred EEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEEEEc
Q 022652 232 AYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFICHN 276 (294)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 276 (294)
.+...-.... .+. ..++..+...++.|..++.+.+.....
T Consensus 249 ~~~~~~~~~~--~~~---~~~~~~~~~~y~~p~~~g~~~ig~~~~ 288 (405)
T 2gag_B 249 QALVSELFEP--VHP---TVVMSNHIHVYVSQAHKGELVMGAGID 288 (405)
T ss_dssp EEEEEEEBCS--CCC---SEEEETTTTEEEEECTTSEEEEEEEEC
T ss_pred eEEEecCCcc--ccC---ceEEeCCCcEEEEEcCCCcEEEEeccC
Confidence 1111111111 111 123334445568898888777766554
No 31
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.68 E-value=3.7e-16 Score=135.13 Aligned_cols=69 Identities=16% Similarity=0.273 Sum_probs=58.0
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCC--CEEEcCEEEecCCCCc-Hhhhhc-CCC
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRS-PIAKWI-GFS 223 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~S-~~~~~~-~~~ 223 (294)
.++...+.+.|.+.+ .|++++++++|+++..++++.+.|.+.+| .++.||.||+|+|.+| .+.+.+ |++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 477888888888776 58999999999999988776566888887 3799999999999999 577777 775
No 32
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.67 E-value=5e-16 Score=134.98 Aligned_cols=68 Identities=15% Similarity=0.167 Sum_probs=57.4
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-hhhhcCCC
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFS 223 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~-~~~~~~~~ 223 (294)
..++...+.+.|.+.+ .|++++++++|+++..++++ +.|++.+| ++.||.||+|+|.+|. +.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3578888999888877 48999999999999988776 77888888 7999999999999994 66677765
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.67 E-value=2.4e-15 Score=140.23 Aligned_cols=164 Identities=13% Similarity=0.112 Sum_probs=98.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcC---ceEEEcc------------------cHHHHHHHcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGG---TSLTLFK------------------NGWSVLDALGV 115 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g---~~~~~~~------------------~~~~~l~~lg~ 115 (294)
..+||+|||||++|+++|+.|+++|++|+|||++..++.++ .+-.+.+ .+.++++.+++
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 34899999999999999999999999999999976554211 1111211 12233344432
Q ss_pred chhHHhc---------------------cccccceEEEcCCCcEEEEecCCCC---CCCcceeeeeHHHHHHHHHhcC--
Q 022652 116 GSDLRSQ---------------------FLEIKGMAVKSEDGRELRSFGFKDE---DASQEVRAVERRILLETLANQL-- 169 (294)
Q Consensus 116 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~~-- 169 (294)
....... ..+...+.+.+... .......... ........++...+.+.|.+.+
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANA-VEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQ 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHH-HHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHH-HHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHh
Confidence 1100000 00000000100000 0000000000 0011233577888999888776
Q ss_pred CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-hhhhcCC
Q 022652 170 PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGF 222 (294)
Q Consensus 170 ~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~-~~~~~~~ 222 (294)
.|++++++++|+++..++++ +.|++.+|.++.||.||+|+|.+|. +....++
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~l 482 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDC-WLLNFAGDQQATHSVVVLANGHQISRFSQTSTL 482 (676)
T ss_dssp TTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECCGGGGGCSTTTTTC
T ss_pred CCCEEEeCCeeeEEEEeCCe-EEEEECCCCEEECCEEEECCCcchhccccccCC
Confidence 48999999999999988877 6788888888999999999999986 4333333
No 34
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.65 E-value=5.1e-15 Score=138.22 Aligned_cols=113 Identities=12% Similarity=-0.022 Sum_probs=72.3
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCC-EEEcCEEEecCCCCcH-hhhhcCCCCCcccc
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGT-RIYANIVIGCDGIRSP-IAKWIGFSEPKYVG 229 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ad~vV~A~G~~S~-~~~~~~~~~~~~~~ 229 (294)
..++...+.+.|.+.+ .|++|+++++|+++..++++ +.|.+.+|. ++.||.||+|+|.+|. +....+++.....|
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl~p~rG 485 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ-WQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPLSAVRG 485 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS-EEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSCCEEEEE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe-EEEEeCCCcEEEECCEEEECCCcchhccccccCCccccccC
Confidence 3567888999888776 58999999999999988877 668888886 7999999999999986 33333333222222
Q ss_pred ceEEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcC--CCeEEEEEEE
Q 022652 230 HCAYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVS--PTKVYWFICH 275 (294)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~ 275 (294)
+... ..... ........+..+ .++.|.. ++.+.+...+
T Consensus 486 q~~~---~~~~~--~~~~l~~v~~~~---~Yl~P~~~~~g~~~iGat~ 525 (689)
T 3pvc_A 486 QVSH---IPTTP--VLSQLQQVLCYD---GYLTPVNPANQHHCIGASY 525 (689)
T ss_dssp EEEE---EECCT--TGGGCCSEEESS---SEECCCBTTTTEEEEECCC
T ss_pred cEEE---ECCCC--ccccCCeeEeCC---ceEccccCCCCeEEEEEec
Confidence 3221 22221 111111223333 3578887 6766665444
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.7e-15 Score=132.89 Aligned_cols=141 Identities=21% Similarity=0.296 Sum_probs=89.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC------cCceEEEcc--------------cHHHHHHHcCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLFK--------------NGWSVLDALGV 115 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~------~g~~~~~~~--------------~~~~~l~~lg~ 115 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.++. +|.. .+.. .....+..+..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~-n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRC-NFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTC-EEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCce-eccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 3568999999999999999999999999999999987631 1221 1110 01122222221
Q ss_pred chhHHhccccccceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEE
Q 022652 116 GSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTIL 193 (294)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v 193 (294)
.+.+. . ....++.+..... +..+....+.++.+.|.+.+ .|++++++++|+++..++++ +.|
T Consensus 104 ~~~~~-~-~~~~Gi~~~~~~~-------------g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V 167 (417)
T 3v76_A 104 QDFVA-L-VERHGIGWHEKTL-------------GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRV 167 (417)
T ss_dssp HHHHH-H-HHHTTCCEEECST-------------TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEE
T ss_pred HHHHH-H-HHHcCCCcEEeeC-------------CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEE
Confidence 11110 0 0001111111110 11112245667777777766 38999999999999987776 668
Q ss_pred EecCCCEEEcCEEEecCCCCc
Q 022652 194 ELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 194 ~~~~g~~~~ad~vV~A~G~~S 214 (294)
.+.+| ++.||.||+|+|.+|
T Consensus 168 ~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 168 TTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EETTE-EEEESEEEECCCCSS
T ss_pred EECCc-EEEeeEEEECCCCcc
Confidence 88888 799999999999998
No 36
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.65 E-value=1.4e-15 Score=138.46 Aligned_cols=69 Identities=10% Similarity=0.005 Sum_probs=56.4
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecC---C--CEEEcCEEEecCCCCc-HhhhhcCCC
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVN---G--TRIYANIVIGCDGIRS-PIAKWIGFS 223 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~vV~A~G~~S-~~~~~~~~~ 223 (294)
.++...+...|.+.+ .|++++++++|+++..+++++++|.+.+ | .++.||.||+|+|.|| .+++++|..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 567788888888776 5899999999999999887766777754 3 3689999999999999 577777665
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.65 E-value=4.4e-15 Score=129.18 Aligned_cols=68 Identities=13% Similarity=0.081 Sum_probs=56.1
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc-HhhhhcCCC
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFS 223 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S-~~~~~~~~~ 223 (294)
.++...+.+.|.+.+ .|++++++++|+++..+++++..|++.+| ++.||.||+|+|.+| .+.+.++..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 467888888887776 48999999999999988777555888877 799999999999998 466666665
No 38
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.64 E-value=2.3e-15 Score=133.70 Aligned_cols=164 Identities=16% Similarity=0.210 Sum_probs=97.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC------cCceEEEcc-cHHHHHHHcCCchhHHhc----cc
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLFK-NGWSVLDALGVGSDLRSQ----FL 124 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~------~g~~~~~~~-~~~~~l~~lg~~~~~~~~----~~ 124 (294)
...+||+|||||++|+++|+.|+++|++|+|||+.+.++. ++....... ....++..++....+... ..
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 3568999999999999999999999999999999886531 111110111 111222222211111000 00
Q ss_pred cccceEEEcCCCcEEEEecCCCCCCCccee-eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEE
Q 022652 125 EIKGMAVKSEDGRELRSFGFKDEDASQEVR-AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRI 201 (294)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~ 201 (294)
....+.+....|....... ....+. ......+.+.|.+.+ .|++++++++|+++..++++++.|.+.+|+++
T Consensus 104 ~~~~~~~~~~~G~~~~~~~-----~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i 178 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEED-----HGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVL 178 (447)
T ss_dssp HHHHHHHHHHTTCCEEECG-----GGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEE
T ss_pred HHHHHHHHHhcCCceEEee-----CCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEE
Confidence 0000000000010000000 000000 013466777776665 48999999999999987766678899888789
Q ss_pred EcCEEEecCCCCc-----------HhhhhcCCCC
Q 022652 202 YANIVIGCDGIRS-----------PIAKWIGFSE 224 (294)
Q Consensus 202 ~ad~vV~A~G~~S-----------~~~~~~~~~~ 224 (294)
.||.||+|+|.+| .+++.+|...
T Consensus 179 ~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 179 ETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp ECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred ECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 9999999999999 7777777653
No 39
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.64 E-value=1.4e-14 Score=126.76 Aligned_cols=167 Identities=19% Similarity=0.189 Sum_probs=98.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCce---EE-Ecc---c--H-HHHHHHcCCchhHHhcc----
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTS---LT-LFK---N--G-WSVLDALGVGSDLRSQF---- 123 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~---~~-~~~---~--~-~~~l~~lg~~~~~~~~~---- 123 (294)
.+||+|||||++|+++|+.|+++|++|+|||+.......|.+ .. +.. . . ....+.+.++.++....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERRL 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCccH
Confidence 579999999999999999999999999999998755311111 11 110 0 0 01112222222222110
Q ss_pred ccccc-eEEEcCC------------------CcEEEEec-------CCCC--CC------CcceeeeeHHHHHHHHHhcC
Q 022652 124 LEIKG-MAVKSED------------------GRELRSFG-------FKDE--DA------SQEVRAVERRILLETLANQL 169 (294)
Q Consensus 124 ~~~~~-~~~~~~~------------------~~~~~~~~-------~~~~--~~------~~~~~~~~~~~l~~~L~~~~ 169 (294)
....+ +.+.... +.....++ +... .. ......++...+.+.|.+.+
T Consensus 84 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~a 163 (397)
T 2oln_A 84 IHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLA 163 (397)
T ss_dssp EECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred HHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHHH
Confidence 00011 1111111 10000000 0000 00 01123567778888887765
Q ss_pred --CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc-HhhhhcCCCCCc
Q 022652 170 --PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAKWIGFSEPK 226 (294)
Q Consensus 170 --~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S-~~~~~~~~~~~~ 226 (294)
.|++++++++|+++..++++ +.|.+.++ ++.||.||+|+|.++ .+.+.++...|.
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~~~~-v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~p~ 221 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPDADG-VSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGARLAY 221 (397)
T ss_dssp HHTTCEEEESCCEEEEEEETTE-EEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCCCCE
T ss_pred HHcCCEEECCCEEEEEEEcCCe-EEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCCCCe
Confidence 48999999999999987766 55777666 699999999999995 577777765543
No 40
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.64 E-value=1.1e-14 Score=126.76 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=72.7
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-hhhhcCCCCCccccce
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKYVGHC 231 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~-~~~~~~~~~~~~~~~~ 231 (294)
.+++..+.+.|.+.+ .|++++++++|+++..++++ +.|.+.+| ++.||.||+|+|.+|. +...++...+..+...
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g 237 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEA-LFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKG 237 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSS-EEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCE-EEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccce
Confidence 466788888888776 48999999999999987776 46888777 7999999999999987 7777765544332111
Q ss_pred EEEEEEeCCCCCCCCCceEEEEeCCeEEEEEEcCCCeEEEEE
Q 022652 232 AYRGLGYYPNGQPFEPKLNYIYGRGVRAGYVPVSPTKVYWFI 273 (294)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 273 (294)
.......... .+. . .++.+ ..+++|..++.+.+..
T Consensus 238 -~~~~~~~~~~-~~~-~--~~~~~--~~~~~p~~~g~~~vG~ 272 (382)
T 1ryi_A 238 -ECLSVWNDDI-PLT-K--TLYHD--HCYIVPRKSGRLVVGA 272 (382)
T ss_dssp -EEEEEECCSS-CCC-S--EEEET--TEEEEECTTSEEEEEC
T ss_pred -EEEEECCCCC-Ccc-c--eEEcC--CEEEEEcCCCeEEEee
Confidence 1111222211 122 1 23344 3567898887665544
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.63 E-value=1.7e-15 Score=134.35 Aligned_cols=62 Identities=15% Similarity=0.053 Sum_probs=53.5
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCC---ceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 154 RAVERRILLETLANQL--PPESVQFSS---ELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~---~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
..++...+.+.|.+.+ .|+++++++ +|+++..+++++.+|++.+|+++.||.||+|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 4567778888888776 589999999 9999998877766699999978999999999999986
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.63 E-value=1.3e-14 Score=126.40 Aligned_cols=164 Identities=15% Similarity=0.206 Sum_probs=96.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCce---E-EEcc------cHHH-HHHHcCCchhHHhcc--
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTS---L-TLFK------NGWS-VLDALGVGSDLRSQF-- 123 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~---~-~~~~------~~~~-~l~~lg~~~~~~~~~-- 123 (294)
+++||+|||||++|+++|+.|+++|++|+|||+.......+.+ . .+.. ...+ ..+.+.++.++....
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 3689999999999999999999999999999998754311111 1 1110 1111 112222222222110
Q ss_pred --ccccceEEE-cC-C--------------CcEEEEecC-------CCCC-C-------CcceeeeeHHHHHHHHHhcC-
Q 022652 124 --LEIKGMAVK-SE-D--------------GRELRSFGF-------KDED-A-------SQEVRAVERRILLETLANQL- 169 (294)
Q Consensus 124 --~~~~~~~~~-~~-~--------------~~~~~~~~~-------~~~~-~-------~~~~~~~~~~~l~~~L~~~~- 169 (294)
....+.... .. . +.....+.. +... . ......+++..+.+.|.+.+
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 001111111 11 0 100000000 0000 0 01123567788888888776
Q ss_pred -CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-hhhhcCC
Q 022652 170 -PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGF 222 (294)
Q Consensus 170 -~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~-~~~~~~~ 222 (294)
.|++++++++|++++.++++ +.|++.++ ++.||.||+|+|.++. +...++.
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~ 214 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDISPDS-VKIETANG-SYTADKLIVSMGAWNSKLLSKLNL 214 (389)
T ss_dssp HTTCEEECSCCEEEEEECSSC-EEEEETTE-EEEEEEEEECCGGGHHHHGGGGTE
T ss_pred HCCCEEEcCcEEEEEEecCCe-EEEEeCCC-EEEeCEEEEecCccHHHHhhhhcc
Confidence 48999999999999987766 55777766 6999999999999985 5555553
No 43
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.63 E-value=2.8e-15 Score=125.18 Aligned_cols=135 Identities=24% Similarity=0.314 Sum_probs=91.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCCCcC-------ceEEEcccHHHHHHHcCCchhHHhcccccc
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLRTGG-------TSLTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~~~~~~g-------~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~ 127 (294)
...+||+|||||++|+++|+.|+++ |++|+|+|+.+.++... ....+.....++++++|+....
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~-------- 108 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDE-------- 108 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEE--------
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCccc--------
Confidence 3568999999999999999999997 99999999998663210 0122233345555555542100
Q ss_pred ceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEec--------
Q 022652 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELV-------- 196 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~-------- 196 (294)
.+ ......+..++...|.+.+ .+++++++++|+++..+++.+..|.+.
T Consensus 109 -------~~--------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~ 167 (284)
T 1rp0_A 109 -------QD--------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNH 167 (284)
T ss_dssp -------CS--------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCT
T ss_pred -------CC--------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEecccccccc
Confidence 00 0011124566666666554 489999999999999877665455542
Q ss_pred -CC-----CEEEcCEEEecCCCCcHhhhh
Q 022652 197 -NG-----TRIYANIVIGCDGIRSPIAKW 219 (294)
Q Consensus 197 -~g-----~~~~ad~vV~A~G~~S~~~~~ 219 (294)
++ .++.||.||+|+|..|.++..
T Consensus 168 ~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 168 HTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp TTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CccccCceEEEECCEEEECCCCchHHHHH
Confidence 22 479999999999998876543
No 44
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.62 E-value=7e-15 Score=132.67 Aligned_cols=141 Identities=17% Similarity=0.301 Sum_probs=92.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC------------------------cCceEE----E------
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------------------------GGTSLT----L------ 102 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~------------------------~g~~~~----~------ 102 (294)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+.. +|.+.. +
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~ 185 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKD 185 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecc
Confidence 348999999999999999999999999999999865410 000000 0
Q ss_pred ----cccHHHHHHHcCCchhHHhccccccceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEe
Q 022652 103 ----FKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQF 176 (294)
Q Consensus 103 ----~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~ 176 (294)
.....+.+...|....+.. .. ...........+.+.|.+.+ .|+++++
T Consensus 186 ~~~~~~~v~~~~~~~G~~~~i~~-------------------------~~-~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~ 239 (549)
T 3nlc_A 186 PNFYGRKVITEFVEAGAPEEILY-------------------------VS-KPHIGTFKLVTMIEKMRATIIELGGEIRF 239 (549)
T ss_dssp TTCHHHHHHHHHHHTTCCGGGGT-------------------------BS-SCCCCHHHHHHHHHHHHHHHHHTTCEEES
T ss_pred ccccHHHHHHHHHHcCCCceEee-------------------------cc-ccccccchHHHHHHHHHHHHHhcCCEEEe
Confidence 0001111112222111100 00 00111133456666666655 4899999
Q ss_pred CCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH----hhhhcCCC
Q 022652 177 SSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP----IAKWIGFS 223 (294)
Q Consensus 177 ~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~----~~~~~~~~ 223 (294)
+++|+++..++++++.|.+.+|+++.||.||+|+|.++. ..+..|+.
T Consensus 240 ~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 240 STRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp SCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 999999998877777799999989999999999999995 34444555
No 45
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.61 E-value=4e-15 Score=125.83 Aligned_cols=134 Identities=22% Similarity=0.333 Sum_probs=90.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcC-------ceEEEcccHHHHHHHcCCchhHHhcccccc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGG-------TSLTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g-------~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~ 127 (294)
..+||+|||||++|+++|+.|+++ |++|+|+|+...++.+. ....+.+...++++.+|+....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~-------- 149 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYED-------- 149 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEE--------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccc--------
Confidence 468999999999999999999998 99999999987653211 1123335556777777763110
Q ss_pred ceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCC----------------
Q 022652 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGN---------------- 188 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~---------------- 188 (294)
.+. .....+..++.+.|.+.+ +++++++++.|+++..+++
T Consensus 150 -------~G~--------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~ 208 (344)
T 3jsk_A 150 -------EGD--------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE 208 (344)
T ss_dssp -------CSS--------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------
T ss_pred -------cCC--------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC
Confidence 000 011113456666666554 4889999999999987652
Q ss_pred ---ceEEEEec--------------CCCEEEcCEEEecCCCCcHhhhh
Q 022652 189 ---GVTILELV--------------NGTRIYANIVIGCDGIRSPIAKW 219 (294)
Q Consensus 189 ---~~~~v~~~--------------~g~~~~ad~vV~A~G~~S~~~~~ 219 (294)
.+.+|.+. +..+++|++||+|||..|.+++.
T Consensus 209 g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 209 AKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred CCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 33344431 22479999999999999985433
No 46
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.59 E-value=1.1e-14 Score=132.63 Aligned_cols=153 Identities=18% Similarity=0.206 Sum_probs=96.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC-CCCCcCceEEEcc----cHHHHHHHcCCc-hhHHhccccccceE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLFK----NGWSVLDALGVG-SDLRSQFLEIKGMA 130 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~-~~~~~g~~~~~~~----~~~~~l~~lg~~-~~~~~~~~~~~~~~ 130 (294)
..+||+|||||+||+++|+.|++.|++|+|+|+.. ..+..++...+.. ...+.++.++-. .... ...++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~----d~~gi~ 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAI----DQAGIQ 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHH----HHHEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHh----hhcccc
Confidence 46899999999999999999999999999999984 2322222111111 122333444321 1111 111122
Q ss_pred EEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEE
Q 022652 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVI 207 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (294)
+..... ............+++..+.+.|.+.+ .|+++ ++++|+++..+++.+++|.+.+|.++.||.||
T Consensus 103 f~~l~~-------~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VV 174 (651)
T 3ces_A 103 FRILNA-------SKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVV 174 (651)
T ss_dssp EEEEST-------TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEE
T ss_pred hhhhhc-------ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEE
Confidence 211000 00000111223577777777776655 47888 57899999887777778899888889999999
Q ss_pred ecCCCCcHhhhhcC
Q 022652 208 GCDGIRSPIAKWIG 221 (294)
Q Consensus 208 ~A~G~~S~~~~~~~ 221 (294)
+|+|.++..+...|
T Consensus 175 LATGt~s~~~~i~G 188 (651)
T 3ces_A 175 LTVGTFLDGKIHIG 188 (651)
T ss_dssp ECCSTTTCCEEECC
T ss_pred EcCCCCccCccccC
Confidence 99999987654433
No 47
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.59 E-value=2.5e-15 Score=137.35 Aligned_cols=164 Identities=15% Similarity=0.173 Sum_probs=96.0
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC----cCceEEEcccHHHHHHHcCCchhHHhccccc----
Q 022652 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT----GGTSLTLFKNGWSVLDALGVGSDLRSQFLEI---- 126 (294)
Q Consensus 55 ~~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~----~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~---- 126 (294)
....+||+|||||++|+++|+.|+++|++|+||||.+.++. .+.++. .......+.+++.+.........
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~--~~~~~~~~~~g~~ds~~~~~~~~~~~~ 195 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMN--AVGTKQQTAHGVEDKVEWFIEDAMKGG 195 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEE--CSSCHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeE--ccCCHHHHHhCCCCCHHHHHHHHHHhc
Confidence 34568999999999999999999999999999999986642 112222 22223334444332211100000
Q ss_pred -----------------cceEEEcCCCcEEEEecC-CCCCCCcce----eeeeHHHHHHHHHhcC--CCCceEeCCceeE
Q 022652 127 -----------------KGMAVKSEDGRELRSFGF-KDEDASQEV----RAVERRILLETLANQL--PPESVQFSSELAK 182 (294)
Q Consensus 127 -----------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~ 182 (294)
..+.+....|..+..... .....+... ..+....+.+.|.+.+ .|++|+++++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~ 275 (566)
T 1qo8_A 196 RQQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVK 275 (566)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEE
T ss_pred CCCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 000000000100000000 000000000 0134667777777666 4899999999999
Q ss_pred EEEcC-CceEEEEec--CCC--EEEcCEEEecCCCCcHhhhhc
Q 022652 183 IETSG-NGVTILELV--NGT--RIYANIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 183 i~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~S~~~~~~ 220 (294)
+..++ +.+++|.+. +|+ ++.||.||+|+|.++..++++
T Consensus 276 l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 276 LVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99877 655556554 664 689999999999999876655
No 48
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.59 E-value=2.9e-14 Score=123.55 Aligned_cols=156 Identities=17% Similarity=0.259 Sum_probs=92.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCc----CceEEEcc------cHHH-HHHHcCCchhHHhc----
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLTLFK------NGWS-VLDALGVGSDLRSQ---- 122 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~----g~~~~~~~------~~~~-~l~~lg~~~~~~~~---- 122 (294)
++||+|||||++|+++|++|+++|++|+|+|+....... +.+-.+.. ...+ ..+.+.++.++...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 579999999999999999999999999999998755211 11111110 0011 11122222222200
Q ss_pred -cccccc-eEEEcCC--------------CcEEEEecC-------CC--CCC------CcceeeeeHHHHHHHHHhcC--
Q 022652 123 -FLEIKG-MAVKSED--------------GRELRSFGF-------KD--EDA------SQEVRAVERRILLETLANQL-- 169 (294)
Q Consensus 123 -~~~~~~-~~~~~~~--------------~~~~~~~~~-------~~--~~~------~~~~~~~~~~~l~~~L~~~~-- 169 (294)
.....+ +.+.... +.....++. +. ... ......+++..+.+.|.+.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 161 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE 161 (372)
T ss_dssp CSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH
Confidence 000011 1111100 000110100 00 000 01223567888888888776
Q ss_pred CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 170 PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 170 ~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.|++++++++|+++..++++ +.|++.+| ++.||.||+|+|.+|.
T Consensus 162 ~G~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 162 AGCAQLFNCPVTAIRHDDDG-VTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp TTCEEECSCCEEEEEECSSS-EEEEESSC-EEEEEEEEECCGGGGG
T ss_pred CCCEEEcCCEEEEEEEcCCE-EEEEECCC-eEEcCEEEEcCCccHH
Confidence 48999999999999987776 56888877 4999999999999985
No 49
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.58 E-value=2.3e-14 Score=130.05 Aligned_cols=150 Identities=16% Similarity=0.136 Sum_probs=95.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC-CCCCcCceEEEc----ccHHHHHHHcCC-chhHHhccccccceE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLF----KNGWSVLDALGV-GSDLRSQFLEIKGMA 130 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~-~~~~~g~~~~~~----~~~~~~l~~lg~-~~~~~~~~~~~~~~~ 130 (294)
..+||+|||||+||+++|+.|++.|++|+|+|+.. ..+..++..... ....+.++.++- +..... ..++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d----~~gi~ 101 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAID----QTGIQ 101 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHH----HHEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhh----hcccc
Confidence 46899999999999999999999999999999984 232222111111 112233444432 221111 11122
Q ss_pred EEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEE
Q 022652 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVI 207 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (294)
+...+. ............+++..+.+.|.+.+ +++++ ++++|+++..+++.+++|.+.+|..+.||.||
T Consensus 102 f~~l~~-------~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVV 173 (637)
T 2zxi_A 102 FKMLNT-------RKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVV 173 (637)
T ss_dssp EEEEST-------TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEE
T ss_pred eeeccc-------ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 211000 00000111223567888877777655 47888 57899999888777778999999899999999
Q ss_pred ecCCCCcHhhh
Q 022652 208 GCDGIRSPIAK 218 (294)
Q Consensus 208 ~A~G~~S~~~~ 218 (294)
+|+|.++..+.
T Consensus 174 LATG~~s~~~~ 184 (637)
T 2zxi_A 174 VTTGTFLNGVI 184 (637)
T ss_dssp ECCTTCBTCEE
T ss_pred EccCCCccCce
Confidence 99999876543
No 50
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.58 E-value=1.9e-14 Score=111.93 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=85.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCcE
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 138 (294)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....... .+ .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------------~~--------~-------------- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------------RV--------P-------------- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------------CC--------C--------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------------hh--------h--------------
Confidence 6899999999999999999999999999999873311000 00 0
Q ss_pred EEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 139 LRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
.+... + ..+...++.+.+.+.+ .+++++++ +|+++..++++ +.+.+++| ++.+|.||+|+|.++.+
T Consensus 45 ----~~~~~--~---~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 45 ----NYPGL--L---DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp ----CSTTC--T---TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred ----ccCCC--c---CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEECCC-EEEECEEEECCCCCCCc
Confidence 00000 0 0133455666665554 48999999 99999987666 56888888 89999999999999988
Q ss_pred hhhcCCC
Q 022652 217 AKWIGFS 223 (294)
Q Consensus 217 ~~~~~~~ 223 (294)
++.++++
T Consensus 113 ~~~~g~~ 119 (180)
T 2ywl_A 113 PSLLGLT 119 (180)
T ss_dssp HHHHTCC
T ss_pred cccCCCC
Confidence 7777765
No 51
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.58 E-value=1.4e-14 Score=117.33 Aligned_cols=124 Identities=18% Similarity=0.144 Sum_probs=86.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccH-----HHHHHHcCCchhHHhccccccceEE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNG-----WSVLDALGVGSDLRSQFLEIKGMAV 131 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~-----~~~l~~lg~~~~~~~~~~~~~~~~~ 131 (294)
..+||+|||||++|+++|+.|++.|++|+|+|+.... .| ....+.. ..+++.+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~--~G--~~~~~~~~~~~~~~~~~~~~----------------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA--VM--MPFLPPKPPFPPGSLLERAY----------------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG--TT--CCSSCCCSCCCTTCHHHHHC-----------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc--CC--cccCccccccchhhHHhhhc-----------------
Confidence 3689999999999999999999999999999998432 11 1111100 00000000
Q ss_pred EcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEe
Q 022652 132 KSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIG 208 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~ 208 (294)
+ .... ++..+.+.|.+.+ ++++++ +++|+++..++++++.|.+.+|+++.||.||+
T Consensus 61 -d--------------~~g~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 61 -D--------------PKDE-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp -C--------------TTCC-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEE
T ss_pred -c--------------CCCC-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEE
Confidence 0 0010 5666777666655 377887 57999999877776678888888899999999
Q ss_pred cCCCCcHhhhhcCC
Q 022652 209 CDGIRSPIAKWIGF 222 (294)
Q Consensus 209 A~G~~S~~~~~~~~ 222 (294)
|+|.+|..+..+|.
T Consensus 120 A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 120 AVGSFLGARLFLGG 133 (232)
T ss_dssp CCTTCSSCEEEETT
T ss_pred CCCCChhhceecCC
Confidence 99999987655554
No 52
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.57 E-value=2.6e-14 Score=124.93 Aligned_cols=139 Identities=22% Similarity=0.233 Sum_probs=85.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC------cCce--EEEccc-----------HHHHHHHcCCchh
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTS--LTLFKN-----------GWSVLDALGVGSD 118 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~------~g~~--~~~~~~-----------~~~~l~~lg~~~~ 118 (294)
++||+|||||++|+++|+.|+++|++|+|+|+.+.++. +|.. ...... ....+..+...+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 58999999999999999999999999999999986531 1221 110000 0011111110000
Q ss_pred HHhccccccceEEEc-CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEc----CCceE
Q 022652 119 LRSQFLEIKGMAVKS-EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETS----GNGVT 191 (294)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~----~~~~~ 191 (294)
+ .. ....++.+.. ..+.. +....+.++.+.|.+.+ .|++++++++|+++..+ +++ +
T Consensus 84 ~-~~-~~~~Gi~~~~~~~g~~--------------~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~ 146 (401)
T 2gqf_A 84 I-SL-VAEQGITYHEKELGQL--------------FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-F 146 (401)
T ss_dssp H-HH-HHHTTCCEEECSTTEE--------------EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-E
T ss_pred H-HH-HHhCCCceEECcCCEE--------------ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-E
Confidence 0 00 0000111111 11110 00004566667776665 38999999999999876 444 6
Q ss_pred EEEecCCCEEEcCEEEecCCCCc
Q 022652 192 ILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 192 ~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.|++.++ +++||.||+|+|.+|
T Consensus 147 ~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 147 VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEEETTE-EEEESEEEECCCCSS
T ss_pred EEEECCC-EEECCEEEECCCCcc
Confidence 6888777 799999999999999
No 53
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.56 E-value=2.6e-14 Score=127.06 Aligned_cols=73 Identities=10% Similarity=0.129 Sum_probs=58.3
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEE---------------cCCceEEEEecCCCEE--EcCEEEecCCCCc
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIET---------------SGNGVTILELVNGTRI--YANIVIGCDGIRS 214 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~---------------~~~~~~~v~~~~g~~~--~ad~vV~A~G~~S 214 (294)
..++...+.+.|.+.+ .|++++++++|+++.. ++++++.|.+.+| ++ .||.||+|+|.++
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3467778888888776 5899999999999987 4555567888888 58 9999999999998
Q ss_pred H-hhhhcCCCCCcc
Q 022652 215 P-IAKWIGFSEPKY 227 (294)
Q Consensus 215 ~-~~~~~~~~~~~~ 227 (294)
. +...++...+..
T Consensus 255 ~~l~~~~g~~~~~~ 268 (448)
T 3axb_A 255 NRLLNPLGIDTFSR 268 (448)
T ss_dssp HHHHGGGTCCCSEE
T ss_pred HHHHHHcCCCCccc
Confidence 7 777777665544
No 54
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.56 E-value=8e-15 Score=134.13 Aligned_cols=163 Identities=15% Similarity=0.159 Sum_probs=93.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC----cCceEEEcccHHHHHHHcCCchhHHhccccc-----
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT----GGTSLTLFKNGWSVLDALGVGSDLRSQFLEI----- 126 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~----~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~----- 126 (294)
...+||+|||||++|+++|+.|+++|++|+||||.+..+. .+.++... ....++.+|+.+.........
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~--~~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAA--WTDQQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECS--SCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeC--CCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 3468999999999999999999999999999999986642 12222221 122334444322211100000
Q ss_pred ----------------cceEEEcCCCcEEEEecC-CCCCCCccee----eeeHHHHHHHHHhcC--CCCceEeCCceeEE
Q 022652 127 ----------------KGMAVKSEDGRELRSFGF-KDEDASQEVR----AVERRILLETLANQL--PPESVQFSSELAKI 183 (294)
Q Consensus 127 ----------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i 183 (294)
..+.+....|..+..+.. .....+.... ......+.+.|.+.+ .+++|+++++|+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 202 NINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEV 281 (571)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEE
T ss_pred CCCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEe
Confidence 000000000100000000 0000000000 023456777777665 48999999999999
Q ss_pred EEcC-CceEEEEec--CCC--EEEcCEEEecCCCCcHhhhhc
Q 022652 184 ETSG-NGVTILELV--NGT--RIYANIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 184 ~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~S~~~~~~ 220 (294)
..++ +.+++|.+. +|+ ++.||.||+|+|.++..++++
T Consensus 282 ~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 9876 555555554 564 689999999999998754433
No 55
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.56 E-value=4.7e-13 Score=120.50 Aligned_cols=111 Identities=13% Similarity=-0.004 Sum_probs=72.4
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEEEecCCCCcH-hhhh-cCCC-
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGIRSP-IAKW-IGFS- 223 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~~S~-~~~~-~~~~- 223 (294)
..++...+...|.+.+ .|++++++++|+++..++ +++.|.+. +|+ ++.||.||+|+|.||. +.+. ++..
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 3478889999988876 589999999999999876 45667773 565 7999999999999996 4543 5432
Q ss_pred -CCccc--cceEEEEEEeCCCCCCCCCceEEEE--eCCeEEEEEEcCCCeEEEE
Q 022652 224 -EPKYV--GHCAYRGLGYYPNGQPFEPKLNYIY--GRGVRAGYVPVSPTKVYWF 272 (294)
Q Consensus 224 -~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~ 272 (294)
.+..+ |+.. +.+ ...+.. ..+++ .++..++++|..++...+.
T Consensus 223 ~~~i~p~rG~~~---~~~--~~~~~~--~~~~~~~~dg~~~~~~P~~~g~~~iG 269 (501)
T 2qcu_A 223 PYGIRLIKGSHI---VVP--RVHTQK--QAYILQNEDKRIVFVIPWMDEFSIIG 269 (501)
T ss_dssp SSCBCCEEEEEE---EEE--CSSSCS--CEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred ccccccceeEEE---EEC--CCCCCc--eEEEeecCCCCEEEEEEcCCCcEEEc
Confidence 22222 2221 222 111112 22233 2566778999987765443
No 56
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.54 E-value=2.2e-14 Score=125.89 Aligned_cols=166 Identities=16% Similarity=0.143 Sum_probs=92.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCc-Cc--eEEE-cccH------HHHHHHcCCchhHHhc--
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTG-GT--SLTL-FKNG------WSVLDALGVGSDLRSQ-- 122 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~-g~--~~~~-~~~~------~~~l~~lg~~~~~~~~-- 122 (294)
..+||+|||||++|+++|+.|+++ |++|+|||+....... +. +..+ .+.. ....+.+.++.+....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999 9999999998644211 01 1012 1110 0111112111110000
Q ss_pred --cccccceE-EEc---CCCcEEEEecCCC-----------CC-----CCcceeeeeHHHHHHHHHhcC--CCCceEeCC
Q 022652 123 --FLEIKGMA-VKS---EDGRELRSFGFKD-----------ED-----ASQEVRAVERRILLETLANQL--PPESVQFSS 178 (294)
Q Consensus 123 --~~~~~~~~-~~~---~~~~~~~~~~~~~-----------~~-----~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~ 178 (294)
.....+.. +.. ..+ .+....... .. .......+++..+.+.|.+.+ .|+++++++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g-~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~ 193 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSG-LTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNT 193 (405)
T ss_dssp CCCEEECCEEEEESSCCSSS-CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCcEEeeCeEEehhhHhHCC-CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCC
Confidence 00000110 000 001 000000000 00 011123567888988888776 489999999
Q ss_pred cee---------EEEEcCCceEEEEecCCCEEEcCEEEecCCCCc-Hhhh-hcCCCCC
Q 022652 179 ELA---------KIETSGNGVTILELVNGTRIYANIVIGCDGIRS-PIAK-WIGFSEP 225 (294)
Q Consensus 179 ~v~---------~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S-~~~~-~~~~~~~ 225 (294)
+|+ ++..++++ +.|.+.+| ++.||.||+|+|.+| .+++ .++...+
T Consensus 194 ~v~~~~g~~~~~~i~~~~~~-v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~~ 249 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTNTH-QIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHTR 249 (405)
T ss_dssp EEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCCC
T ss_pred EEEeccccccccceEeeCCe-EEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCCC
Confidence 999 88766655 45777766 799999999999999 6777 7777654
No 57
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.53 E-value=7.3e-14 Score=117.47 Aligned_cols=136 Identities=18% Similarity=0.283 Sum_probs=91.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcC-------ceEEEcccHHHHHHHcCCchhHHhccccc
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGG-------TSLTLFKNGWSVLDALGVGSDLRSQFLEI 126 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g-------~~~~~~~~~~~~l~~lg~~~~~~~~~~~~ 126 (294)
...+||+|||||++|+++|+.|+++ |++|+|+|+.+.++.+. ....+.....++++.+|+....
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~------- 135 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYED------- 135 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEE-------
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccccc-------
Confidence 4568999999999999999999999 99999999988663211 1123334455666666653110
Q ss_pred cceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcC----C--ceEEEEec-
Q 022652 127 KGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSG----N--GVTILELV- 196 (294)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~----~--~~~~v~~~- 196 (294)
. +. .....+..++...|.+.+ ++++++.+++|+++..++ + .+.+|.+.
T Consensus 136 -------~-g~--------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~ 193 (326)
T 2gjc_A 136 -------E-GD--------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNW 193 (326)
T ss_dssp -------C-SS--------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEE
T ss_pred -------C-CC--------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecc
Confidence 0 10 111123456666666654 488999999999998774 2 44555442
Q ss_pred -------------CCCEEEc---------------CEEEecCCCCcHhhhhc
Q 022652 197 -------------NGTRIYA---------------NIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 197 -------------~g~~~~a---------------d~vV~A~G~~S~~~~~~ 220 (294)
++.++.| |+||+|+|..+++...+
T Consensus 194 ~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 194 TLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp HHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred eeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 3346999 99999999998876655
No 58
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.53 E-value=5.7e-14 Score=127.83 Aligned_cols=152 Identities=13% Similarity=0.148 Sum_probs=92.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC-CCCCcCceEEEcc-cHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD-SLRTGGTSLTLFK-NGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~-~~~~~g~~~~~~~-~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
..+||+|||||++|+++|+.|++.|.+|+|+|+.. .++..++...... ....+++.++.+..+........++.+...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 46899999999999999999999999999999985 2322222111111 112333332111110000011112222110
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDG 211 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G 211 (294)
+.. ...........+++..+.+.|.+.+ ++++++ +.+|+++..+++.+.+|.+.+|.++.||.||+|+|
T Consensus 100 ~~~-------kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG 171 (641)
T 3cp8_A 100 NRS-------KGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACG 171 (641)
T ss_dssp CSS-------SCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCT
T ss_pred ccc-------cCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcC
Confidence 000 0000111234578888887776655 478885 56999998877776668888898999999999999
Q ss_pred CCcHh
Q 022652 212 IRSPI 216 (294)
Q Consensus 212 ~~S~~ 216 (294)
.++..
T Consensus 172 ~~s~~ 176 (641)
T 3cp8_A 172 TFLNG 176 (641)
T ss_dssp TCBTC
T ss_pred CCCCc
Confidence 98764
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.51 E-value=9.3e-14 Score=119.36 Aligned_cols=128 Identities=18% Similarity=0.209 Sum_probs=83.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
++||+|||||++|+++|+.|+++|++|+|+|+.+.++..... .++.+. .........+ .+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~---------------~~~~~~-~~~~~~~~~~---~~- 62 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH---------------AWHSLH-LFSPAGWSSI---PG- 62 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG---------------SCTTCB-CSSCGGGSCC---SS-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC---------------CCCCcE-ecCchhhhhC---CC-
Confidence 579999999999999999999999999999999866321100 000000 0000000000 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEE-EEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTI-LELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~-v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+... ........+.++.+.+.+.+ .+++++++++|+++..+++. +. |.+.++ ++.+|.||+|+|.++
T Consensus 63 ----~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 63 ----WPMP----ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGER-LRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp ----SCCC----CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTE-EEEEETTSC-EEEEEEEEECCCSGG
T ss_pred ----CCCC----CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCc-EEEEEeCCC-EEEeCEEEECCCCCC
Confidence 0000 11111245666666666554 38899999999999987765 66 888887 799999999999887
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 133 ~ 133 (357)
T 4a9w_A 133 E 133 (357)
T ss_dssp G
T ss_pred C
Confidence 5
No 60
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.51 E-value=3.4e-14 Score=122.65 Aligned_cols=121 Identities=19% Similarity=0.206 Sum_probs=86.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|||+.+.++ |. +.. + .+ ....+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--g~----------~~~-~----------~~--~~~~~~--- 64 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--GQ----------LAA-L----------YP--EKHIYD--- 64 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--HH----------HHH-T----------CT--TSEECC---
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--Cc----------ccc-c----------CC--Cccccc---
Confidence 46899999999999999999999999999999987652 21 000 0 00 000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
. .....+.+.++.+.|.+.+ .+++++++++|+++..++++.+.|.+.+|+++.+|.||+|+|..+
T Consensus 65 -------~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 65 -------V------AGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp -------S------TTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred -------C------CCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 0 0011245667777666555 378899999999999876644678888888899999999999977
Q ss_pred Hhhh
Q 022652 215 PIAK 218 (294)
Q Consensus 215 ~~~~ 218 (294)
..++
T Consensus 132 ~~~~ 135 (360)
T 3ab1_A 132 FEPR 135 (360)
T ss_dssp CCBC
T ss_pred CCCC
Confidence 5443
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.49 E-value=6.3e-14 Score=119.65 Aligned_cols=122 Identities=18% Similarity=0.203 Sum_probs=85.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.++ |. +... . + ...++.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--g~----------~~~~--~---------~--~~~~~~--- 55 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--GQ----------LTAL--Y---------P--EKYIYD--- 55 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--HH----------HHHT--C---------T--TSEECC---
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--Ce----------eecc--C---------C--Cceeec---
Confidence 46899999999999999999999999999999987652 11 0000 0 0 000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
. .....+.+.++.+.+.+.+ .+++++++++|+++..+++. +.|.+.+++++.+|.||+|+|.++
T Consensus 56 -------~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 56 -------V------AGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp -------S------TTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEEETTSCEEEEEEEEECCTTSE
T ss_pred -------c------CCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEEECCCCEEEeCEEEECCCCCC
Confidence 0 0011245566666665554 26889999999999887664 668888888899999999999987
Q ss_pred Hhhhhc
Q 022652 215 PIAKWI 220 (294)
Q Consensus 215 ~~~~~~ 220 (294)
...+..
T Consensus 122 ~~p~~~ 127 (335)
T 2zbw_A 122 FEPRRI 127 (335)
T ss_dssp EEECCC
T ss_pred CCCCCC
Confidence 544433
No 62
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.49 E-value=3.3e-13 Score=128.57 Aligned_cols=74 Identities=26% Similarity=0.348 Sum_probs=59.4
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-hhhhcCCCCCccc
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP-IAKWIGFSEPKYV 228 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~-~~~~~~~~~~~~~ 228 (294)
..+++..+.+.|.+.+ .|++++++++|+++..++++++.|.+.+| ++.||.||+|+|.+|. +.+.+|...|..+
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~pl~p 222 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAVPLLP 222 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCCCCEE
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCcccee
Confidence 3468888999988877 58999999999999987777667888877 6999999999999996 3455566655444
No 63
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.49 E-value=1.4e-13 Score=124.72 Aligned_cols=169 Identities=22% Similarity=0.366 Sum_probs=100.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHH-HcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQ-RLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~-~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
..+||+|||||++|+++|+.|+ +.|++|+|+|+.+.++ |. +......|+..++......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G--Gt--------w~~~~ypg~~~d~~s~~~~---------- 66 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG--GT--------WYWNRYPGALSDTESHLYR---------- 66 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC--TH--------HHHCCCTTCEEEEEGGGSS----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC--Cc--------ccccCCCCceecCCcceee----------
Confidence 4589999999999999999999 9999999999988663 21 0000000110000000000
Q ss_pred CcEEEEecCCC---CCCCcceeeeeHHHHHHHHHhcC--CCC--ceEeCCceeEEEEcCC-ceEEEEecCCCEEEcCEEE
Q 022652 136 GRELRSFGFKD---EDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVI 207 (294)
Q Consensus 136 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~--~~v--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV 207 (294)
+.+.. ...........+.++.+.+.+.+ .++ +++++++|+++..+++ +.|.|.+.+|+++.+|.||
T Consensus 67 ------~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV 140 (540)
T 3gwf_A 67 ------FSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVV 140 (540)
T ss_dssp ------CCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEE
T ss_pred ------eccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEE
Confidence 00000 00011112356667766665544 256 8999999999998765 4577999999899999999
Q ss_pred ecCCCCcHhhhhcCCCCCccccceEEEEE----EeCCCCCCCCCceEEEEeCCe
Q 022652 208 GCDGIRSPIAKWIGFSEPKYVGHCAYRGL----GYYPNGQPFEPKLNYIYGRGV 257 (294)
Q Consensus 208 ~A~G~~S~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 257 (294)
+|+|.+|..+ .|..+|...+.+. ..+.....+.+....++|.|.
T Consensus 141 ~AtG~~s~p~------~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~ 188 (540)
T 3gwf_A 141 NAVGLLSAIN------FPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGS 188 (540)
T ss_dssp ECCCSCCSBC------CCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSH
T ss_pred ECCcccccCC------CCCCCCccccCCCEEEeecCCCccccccceEEEECCCc
Confidence 9999877532 2333333222111 122223334456677777664
No 64
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.49 E-value=2.9e-13 Score=119.61 Aligned_cols=143 Identities=20% Similarity=0.155 Sum_probs=84.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC-cCce---EEEcccHHHHHHHcCC--chhHHhccccccceE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT-GGTS---LTLFKNGWSVLDALGV--GSDLRSQFLEIKGMA 130 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~-~g~~---~~~~~~~~~~l~~lg~--~~~~~~~~~~~~~~~ 130 (294)
+++||+|||||++|+++|+.|+++|++|+|||+.+.... .|.. ..........++.+|+ |... .....++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~---~~~~~~~~ 97 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE---EFGYFGHY 97 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH---HHCEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh---ccccccee
Confidence 457999999999999999999999999999999873211 1211 2234455666677754 3221 22233333
Q ss_pred EEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCC-ceeEEEEcCCceEEEEecCCCEEEcCEEE
Q 022652 131 VKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSS-ELAKIETSGNGVTILELVNGTRIYANIVI 207 (294)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~-~v~~i~~~~~~~~~v~~~~g~~~~ad~vV 207 (294)
+....... ..+. .. .......+++..+...|.+.+ .|+++++.. .+.++. .....+|+||
T Consensus 98 ~~~~~~~~-~~~~--~~-~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~-------------~~~~~ad~VV 160 (430)
T 3ihm_A 98 YYVGGPQP-MRFY--GD-LKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE-------------GLSEQYDLLV 160 (430)
T ss_dssp EEECSSSC-EEEE--EE-EEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH-------------HHHTTSSEEE
T ss_pred EEECCCCc-cccc--hh-cCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh-------------hhcccCCEEE
Confidence 33222111 0110 00 012345678888888888776 467776522 111110 0012589999
Q ss_pred ecCCCCcHhhhh
Q 022652 208 GCDGIRSPIAKW 219 (294)
Q Consensus 208 ~A~G~~S~~~~~ 219 (294)
+|+|.+|.++..
T Consensus 161 ~AdG~~S~~~~~ 172 (430)
T 3ihm_A 161 VCTGKYALGKVF 172 (430)
T ss_dssp ECCCCTTGGGGS
T ss_pred ECCCCcchHHhc
Confidence 999999988643
No 65
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.49 E-value=8.1e-14 Score=118.63 Aligned_cols=117 Identities=21% Similarity=0.233 Sum_probs=84.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.++ |. + .... ....+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--G~--------~--~~~~-------------~~~~~~~--- 57 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--GQ--------L--SALY-------------PEKYIYD--- 57 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--HH--------H--HHHC-------------TTSEECC---
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--ce--------e--hhcC-------------CCceEec---
Confidence 35899999999999999999999999999999998652 21 0 0000 0000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+ .....+.+.++.+.+.+.+ .+++++++++|+++..++++.+.|.+.+++ +.+|.||+|+|.++
T Consensus 58 -------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 58 -------V------AGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp -------S------TTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred -------c------CCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 0 0011245667777776655 378999999999999887745778888886 99999999999965
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 124 ~ 124 (332)
T 3lzw_A 124 F 124 (332)
T ss_dssp C
T ss_pred C
Confidence 3
No 66
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.48 E-value=4e-12 Score=116.05 Aligned_cols=69 Identities=10% Similarity=-0.005 Sum_probs=52.8
Q ss_pred eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEEEecCCCCcH-hhhhcCCC
Q 022652 155 AVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGIRSP-IAKWIGFS 223 (294)
Q Consensus 155 ~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~~S~-~~~~~~~~ 223 (294)
.++...+...|++.+ .|++++.+++|+++..+++++++|.+. +++ ++.||.||+|+|.|+. +.+..+..
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~ 260 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTR 260 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSS
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccC
Confidence 356777877777665 589999999999999887776667653 343 6999999999999984 55555543
No 67
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.48 E-value=1.4e-13 Score=124.88 Aligned_cols=169 Identities=21% Similarity=0.299 Sum_probs=99.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|++.|++|+|||+.+.++ |. +......|+..++......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--Gt--------w~~~~ypg~~~dv~s~~y~----------- 78 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG--GV--------WYWNRYPGARCDVESIDYS----------- 78 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCTTTSS-----------
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------cccCCCCCceeCCCchhcc-----------
Confidence 46899999999999999999999999999999988663 21 1000001111110000000
Q ss_pred cEEEEecCCC---CCCCcceeeeeHHHHHHHHHhcC--CCC--ceEeCCceeEEEEcCC-ceEEEEecCCCEEEcCEEEe
Q 022652 137 RELRSFGFKD---EDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIG 208 (294)
Q Consensus 137 ~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~--~~v--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~ 208 (294)
+.+.. ...........+.++.+.+.+.+ .++ +++++++|+++..+++ +.|.|.+.+|+++.+|.||+
T Consensus 79 -----~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~ 153 (549)
T 4ap3_A 79 -----YSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVV 153 (549)
T ss_dssp -----CCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred -----cccccccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEE
Confidence 00000 00000011245566666555443 255 7999999999998765 35789999999999999999
Q ss_pred cCCCCcHhhhhcCCCCCccccceEEEEE----EeCC-CCCCCCCceEEEEeCCe
Q 022652 209 CDGIRSPIAKWIGFSEPKYVGHCAYRGL----GYYP-NGQPFEPKLNYIYGRGV 257 (294)
Q Consensus 209 A~G~~S~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 257 (294)
|+|.+|.. ..|..+|...+.+. ..+. ....+.+....++|.|.
T Consensus 154 AtG~~s~p------~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~ 201 (549)
T 4ap3_A 154 AAGPLSNA------NTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGS 201 (549)
T ss_dssp CCCSEEEC------CCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSH
T ss_pred CcCCCCCC------CCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCc
Confidence 99987652 22333333322221 1222 22334456677777664
No 68
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.47 E-value=3.5e-13 Score=113.58 Aligned_cols=112 Identities=18% Similarity=0.266 Sum_probs=72.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
++.|||+|||||+||++||+.|+++|++|+|+|+... +|... .... +
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~---gg~~~--------------------~~~~---~------- 50 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN---RNRVT--------------------QNSH---G------- 50 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---GGGGS--------------------SCBC---C-------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC---CCeee--------------------eecC---C-------
Confidence 3579999999999999999999999999999998752 22100 0000 0
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
+. .. ..+...++.+.+.+.+ .+...+++..+..+...+++.+.+.+.+|+++.+|.||+|+|+.
T Consensus 51 --------~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 51 --------FI----TR--DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp --------ST----TC--TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred --------cc----CC--CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 00 00 0133444444443332 13333445566667666665567889999999999999999975
Q ss_pred c
Q 022652 214 S 214 (294)
Q Consensus 214 S 214 (294)
.
T Consensus 117 p 117 (304)
T 4fk1_A 117 E 117 (304)
T ss_dssp E
T ss_pred c
Confidence 4
No 69
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.47 E-value=5.7e-14 Score=126.79 Aligned_cols=57 Identities=12% Similarity=0.065 Sum_probs=43.7
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEc-CCceEEEEecCC-C--EEEcC-EEEecCCCCcHh
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETS-GNGVTILELVNG-T--RIYAN-IVIGCDGIRSPI 216 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~-~~~~~~v~~~~g-~--~~~ad-~vV~A~G~~S~~ 216 (294)
.+.+.|.+.+ .|++|+++++|+++..+ ++.+++|.+.++ + ++.|| .||+|+|.++..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n 266 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYN 266 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhC
Confidence 6777776655 48999999999999988 455566666543 2 58995 999999999853
No 70
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.46 E-value=2e-13 Score=124.03 Aligned_cols=134 Identities=23% Similarity=0.328 Sum_probs=84.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.++ |. +..-...++..+.......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G--G~--------w~~~~~pg~~~d~~~~~~~----------- 73 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG--GV--------WYWNRYPGARCDIESIEYC----------- 73 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCTTTSS-----------
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------ccccCCCceeecccccccc-----------
Confidence 46899999999999999999999999999999998763 21 0000000100000000000
Q ss_pred cEEEEecCCCC---CCCcceeeeeHHHHHHHHHh---cCC-CCceEeCCceeEEEEcCC-ceEEEEecCCCEEEcCEEEe
Q 022652 137 RELRSFGFKDE---DASQEVRAVERRILLETLAN---QLP-PESVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIG 208 (294)
Q Consensus 137 ~~~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~---~~~-~v~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~ 208 (294)
+.+... ..........+.++.+.|.+ ... +.+++++++|+++..+++ +.|.|++.+|+++.||.||+
T Consensus 74 -----~~f~~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~ 148 (542)
T 1w4x_A 74 -----YSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIM 148 (542)
T ss_dssp -----CCSCHHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEE
T ss_pred -----cccChhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEE
Confidence 000000 00000112345555555543 332 467999999999998764 45779999998899999999
Q ss_pred cCCCCcHh
Q 022652 209 CDGIRSPI 216 (294)
Q Consensus 209 A~G~~S~~ 216 (294)
|+|.+|..
T Consensus 149 AtG~~s~p 156 (542)
T 1w4x_A 149 ASGQLSVP 156 (542)
T ss_dssp CCCSCCCC
T ss_pred CcCCCCCC
Confidence 99998753
No 71
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=7.3e-13 Score=119.29 Aligned_cols=61 Identities=16% Similarity=0.319 Sum_probs=44.9
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHhhhhc
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~ 220 (294)
.+.+.|.+.+ .|++|+++++|++|..+++++++|++.||+++.||.||.+.+.+...+..+
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 4555665555 489999999999999999887889999999999999999999887776665
No 72
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.45 E-value=5.6e-13 Score=118.92 Aligned_cols=56 Identities=29% Similarity=0.325 Sum_probs=46.7
Q ss_pred HHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 160 ~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
.+.+.|.+.+..++|+++++|++|+.++++ +.|++.+|+++.||.||+|+..+...
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSC-YSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSS-EEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCe-EEEEECCCCEEECCEEEECCCHHHHH
Confidence 667777777644789999999999988877 66999999889999999999877643
No 73
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.45 E-value=7.2e-13 Score=113.51 Aligned_cols=134 Identities=18% Similarity=0.164 Sum_probs=82.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCCCCcCceE-----------------EEccc----HHHHHHHc-
Q 022652 59 EDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSL-----------------TLFKN----GWSVLDAL- 113 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~~~~g~~~-----------------~~~~~----~~~~l~~l- 113 (294)
+||+|||||++|+++|+.|++ .|++|+|+||.+.++...... ...+. ..+.++.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 999999999987653211111 01111 11111111
Q ss_pred --CCchhHHhccccccceEEEcCCCcEEEEecCCCCCCCccee--eeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCc
Q 022652 114 --GVGSDLRSQFLEIKGMAVKSEDGRELRSFGFKDEDASQEVR--AVERRILLETLANQLPPESVQFSSELAKIETSGNG 189 (294)
Q Consensus 114 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~ 189 (294)
++... +.. ......... ....+ .-....+.+.|.+.+ +++|+++++|++|+.++++
T Consensus 82 ~~g~~~~-------------~~~---~~~~~~~~~---~~~~~~~~~g~~~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~ 141 (342)
T 3qj4_A 82 AYGVLRP-------------LSS---PIEGMVMKE---GDCNFVAPQGISSIIKHYLKES-GAEVYFRHRVTQINLRDDK 141 (342)
T ss_dssp HTTSCEE-------------CCS---CEETCCC-----CCEEEECTTCTTHHHHHHHHHH-TCEEESSCCEEEEEECSSS
T ss_pred hCCCeec-------------Cch---hhcceeccC---CccceecCCCHHHHHHHHHHhc-CCEEEeCCEEEEEEEcCCE
Confidence 11100 000 000000000 00000 012345666776655 7899999999999998777
Q ss_pred eEEEEecCCCEEEcCEEEecCCCC
Q 022652 190 VTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 190 ~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
|.|.+.+|+++.+|.||+|+...
T Consensus 142 -~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 142 -WEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp -EEEEESSSCCEEESEEEECSCHH
T ss_pred -EEEEECCCCEEEcCEEEECCCHH
Confidence 66899888778999999998753
No 74
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.44 E-value=4.2e-13 Score=121.70 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=84.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|++.|++|+|||+.+.++ |. +......|+..+......... + .+.-
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~G--Gt--------w~~~~yPg~~~d~~~~~y~~~---f-~~~~ 73 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVG--GT--------WYWNRYPGCRLDTESYAYGYF---A-LKGI 73 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--TH--------HHHCCCTTCBCSSCHHHHCHH---H-HTTS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC--Cc--------cccCCCCceeecCchhhcccc---c-Cccc
Confidence 46899999999999999999999999999999998663 22 100000011000000000000 0 0000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCC--ceEeCCceeEEEEcCC-ceEEEEecCCCEEEcCEEEecCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPE--SVQFSSELAKIETSGN-GVTILELVNGTRIYANIVIGCDG 211 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v--~i~~~~~v~~i~~~~~-~~~~v~~~~g~~~~ad~vV~A~G 211 (294)
............+.++.+.+.+.+ .++ .++++++|+++..+++ +.|.|++.+|+++.||.||+|+|
T Consensus 74 ---------~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 74 ---------IPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp ---------STTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred ---------ccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 000001111245555555554433 144 7899999999987654 45789999998899999999999
Q ss_pred CCcH
Q 022652 212 IRSP 215 (294)
Q Consensus 212 ~~S~ 215 (294)
.+|.
T Consensus 145 ~~s~ 148 (545)
T 3uox_A 145 PLSA 148 (545)
T ss_dssp SCBC
T ss_pred CCCC
Confidence 8764
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.42 E-value=9.4e-13 Score=110.21 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=78.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
++||+|||||++|+++|..|+++|++|+|+|+......... ..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~-----------------------~~-------------- 44 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFAS-----------------------HS-------------- 44 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCS-----------------------CC--------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccch-----------------------hh--------------
Confidence 47999999999999999999999999999999763210000 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC---CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL---PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
..+. . .......++.+.+.+.+ .+++++ +.+|+++..++++ +.|.+.+++++.+|.||+|+|..+
T Consensus 45 ----~~~~----~--~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~-~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 45 ----HGFL----G--QDGKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGE-FIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp ----CSST----T--CTTCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCCEE
T ss_pred ----cCCc----C--CCCCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCe-EEEEECCCCEEEcCEEEECCCCCC
Confidence 0000 0 01244566666666554 245554 5699999988766 668999998899999999999976
Q ss_pred Hh
Q 022652 215 PI 216 (294)
Q Consensus 215 ~~ 216 (294)
..
T Consensus 113 ~~ 114 (297)
T 3fbs_A 113 EL 114 (297)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.42 E-value=8.9e-13 Score=117.08 Aligned_cols=150 Identities=21% Similarity=0.215 Sum_probs=83.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhc-cccccc-----
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQ-FLEIKG----- 128 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~-~~~~~~----- 128 (294)
..+||+|||||++|+++|..|++.|+ +|+|+|+.+.++ |. +....... ..+++....... ......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G--G~-~~~~~~~~---~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG--GV-WNYTSTLS---NKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS--TT-CSCCSCCC---SCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC--Ce-ecCCCCCC---cccccccccccccccccccccccC
Confidence 46899999999999999999999999 999999987653 11 00000000 000000000000 000000
Q ss_pred ---eEEEc----CCCcEEEEecCCCCC-CCcceeeeeHHHHHHHHHhcCC--CCceEeCCceeEEEEcCCceEEEEecC-
Q 022652 129 ---MAVKS----EDGRELRSFGFKDED-ASQEVRAVERRILLETLANQLP--PESVQFSSELAKIETSGNGVTILELVN- 197 (294)
Q Consensus 129 ---~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~--~v~i~~~~~v~~i~~~~~~~~~v~~~~- 197 (294)
..+.. ...... ..+.... .........+.++.+.|.+.+. +..++++++|+++..++++ |.|.+.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~-~~V~~~~~ 155 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIEL--MGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS-WVVTYKGT 155 (447)
T ss_dssp BCCCCCCTTCBCSSCHHH--HSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE-EEEEEEES
T ss_pred CccCchhhhhccCCCHHH--hccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe-EEEEEeec
Confidence 00000 000000 0000000 0001122456677766655442 5679999999999887665 6677765
Q ss_pred --CC---EEEcCEEEecCCCCcH
Q 022652 198 --GT---RIYANIVIGCDGIRSP 215 (294)
Q Consensus 198 --g~---~~~ad~vV~A~G~~S~ 215 (294)
|+ ++.+|.||+|+|.+|.
T Consensus 156 ~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 156 KAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp STTCCEEEEEESEEEECCCSSSS
T ss_pred CCCCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999875
No 77
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.41 E-value=2e-12 Score=109.41 Aligned_cols=111 Identities=21% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+. + +|.... .
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~--gg~~~~----------------------------------~ 55 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P--GGQLTE----------------------------------A 55 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T--TGGGGG----------------------------------C
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C--CCeecc----------------------------------c
Confidence 4689999999999999999999999999999998 3 221000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
... ..+. . .......++.+.+.+.+ .++++++ ++|+++..+++. +.+.+.++.++.+|.||+|+|...
T Consensus 56 ~~~--~~~~----~--~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 56 GIV--DDYL----G--LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE-FVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp CEE--CCST----T--STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C-EEEEESSSCEEEEEEEEECCCCEE
T ss_pred ccc--cccC----C--CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE-EEEEECCCCEEEcCEEEECcCCCC
Confidence 000 0000 0 01155666766665554 3789988 899999887665 568888888999999999999875
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 126 ~ 126 (323)
T 3f8d_A 126 R 126 (323)
T ss_dssp C
T ss_pred c
Confidence 4
No 78
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.39 E-value=1.7e-12 Score=109.60 Aligned_cols=112 Identities=18% Similarity=0.219 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
+||+|||||++|+++|+.|+++|+ +|+|+|+.. + +|.... ... .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~--gg~~~~---------------------~~~---~-------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P--GGQITG---------------------SSE---I-------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T--TCGGGG---------------------CSC---B--------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C--Cccccc---------------------ccc---c--------
Confidence 699999999999999999999999 999999953 2 221000 000 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
..+ +.....+.+.++.+.+.+.+ .++++++ ++|+++..+++. +.|.+.+++++.+|.||+|+|.++.
T Consensus 47 ----~~~-----~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 47 ----ENY-----PGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp ----CCS-----TTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTE-EEEEETTSCEEEEEEEEECCCEEEC
T ss_pred ----ccC-----CCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCE-EEEEEcCCCEEECCEEEECCCCCCC
Confidence 000 00001255666766665544 3788887 789999887665 5577888888999999999998765
Q ss_pred h
Q 022652 216 I 216 (294)
Q Consensus 216 ~ 216 (294)
.
T Consensus 116 ~ 116 (311)
T 2q0l_A 116 R 116 (311)
T ss_dssp C
T ss_pred C
Confidence 4
No 79
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.39 E-value=2.7e-12 Score=117.28 Aligned_cols=164 Identities=18% Similarity=0.213 Sum_probs=88.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCc----CceEEEcc-----------cHHHHHHHc---CC---
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLTLFK-----------NGWSVLDAL---GV--- 115 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~----g~~~~~~~-----------~~~~~l~~l---g~--- 115 (294)
..+||+|||+|++|+++|+.|+++|++|+|+|+.+.++.. +.++.... ....+++.+ +.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4679999999999999999999999999999998866321 11221111 001111111 10
Q ss_pred chhHHhcccc--ccceEEEcCCCcEEEEecC-CCCCCCccee----eeeHHHHHHHHHhcC--CCCceEeCCceeEEEEc
Q 022652 116 GSDLRSQFLE--IKGMAVKSEDGRELRSFGF-KDEDASQEVR----AVERRILLETLANQL--PPESVQFSSELAKIETS 186 (294)
Q Consensus 116 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~ 186 (294)
..++...... ...+.+....+..+..... .....+.... ......+.+.|.+.+ .|++++++++|+++..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 0000000000 0000000000000000000 0000000000 123456777776665 48999999999999877
Q ss_pred C-CceEEEEec--CCC--EEEcCEEEecCCCCcHhhhhc
Q 022652 187 G-NGVTILELV--NGT--RIYANIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 187 ~-~~~~~v~~~--~g~--~~~ad~vV~A~G~~S~~~~~~ 220 (294)
+ +.+++|.+. +|+ ++.||.||+|+|.++..++++
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 6 555556554 564 689999999999999754444
No 80
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.37 E-value=6.5e-12 Score=110.66 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=45.2
Q ss_pred HHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 159 RILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 159 ~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
..+.+.|.+.+ .|++|+++++|++|..+++++..|.+. |+++.||.||.|+|.+...
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHH
Confidence 34556666655 489999999999999887775557775 6789999999999988764
No 81
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.36 E-value=3.5e-12 Score=108.34 Aligned_cols=114 Identities=21% Similarity=0.246 Sum_probs=77.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+. .+ +|.... ... .
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~--gg~~~~---------------------~~~---~------- 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP--GGQIAW---------------------SEE---V------- 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT--TGGGGG---------------------CSC---B-------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC--Cccccc---------------------ccc---c-------
Confidence 3689999999999999999999999999999998 33 221000 000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEc--CCceEEEEecCCCEEEcCEEEecCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETS--GNGVTILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (294)
..+. .. ...+.+.++.+.+.+.+ .++++++ .+|+++..+ ++..+.|.+.+|+++.+|.||+|+|.
T Consensus 53 -----~~~~----~~-~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 53 -----ENFP----GF-PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp -----CCST----TC-SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred -----ccCC----CC-CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 0000 00 00134556666665544 3788887 689999876 44324477778888999999999998
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
++.
T Consensus 122 ~~~ 124 (325)
T 2q7v_A 122 DPR 124 (325)
T ss_dssp EEC
T ss_pred CcC
Confidence 654
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.36 E-value=3.5e-12 Score=113.66 Aligned_cols=149 Identities=16% Similarity=0.229 Sum_probs=82.1
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCc---eEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEE
Q 022652 59 EDIVIVGAGIAGLATAVSLQR---LGIG---SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~---~G~~---V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 132 (294)
+||+|||||++|+++|..|++ .|++ |+|+|+.+.++ |........+. ...|+.. ....+......
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G--G~w~~~~~~g~---~~~g~~~----~~~~y~~l~~~ 73 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG--GQWNYTWRTGL---DENGEPV----HSSMYRYLWSN 73 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC--GGGSCCSCCSB---CTTSSBC----CCCCCTTCBCS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC--CEeecCCCCCc---cccCCCC----cCccccchhhc
Confidence 689999999999999999999 9999 99999987653 21000000000 0000000 00000000000
Q ss_pred cCCCc-EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCC--CCc--eEeCCceeEEEEcCC-ceEEEEecC---C--CEE
Q 022652 133 SEDGR-ELRSFGFKDEDASQEVRAVERRILLETLANQLP--PES--VQFSSELAKIETSGN-GVTILELVN---G--TRI 201 (294)
Q Consensus 133 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~v~--i~~~~~v~~i~~~~~-~~~~v~~~~---g--~~~ 201 (294)
..... ....+++.............+.++.+.|.+.+. +++ ++++++|+++..+++ +.|.|.+.+ | .++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~ 153 (464)
T 2xve_A 74 GPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSE 153 (464)
T ss_dssp SCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred CChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEE
Confidence 00000 000000000000000122566777777765542 666 899999999988765 246677754 3 468
Q ss_pred EcCEEEecCCCCcHh
Q 022652 202 YANIVIGCDGIRSPI 216 (294)
Q Consensus 202 ~ad~vV~A~G~~S~~ 216 (294)
.+|.||+|+|.+|..
T Consensus 154 ~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 154 EFDYVVCCTGHFSTP 168 (464)
T ss_dssp EESEEEECCCSSSSB
T ss_pred EcCEEEECCCCCCCC
Confidence 999999999987754
No 83
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.36 E-value=3e-12 Score=109.11 Aligned_cols=117 Identities=16% Similarity=0.224 Sum_probs=79.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC--CCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEc
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS--LRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~--~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 133 (294)
..++||+|||||++|+++|+.|+++|++|+|+|+.+. ...+|.. .. .. .+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~-----------------~~---~~------~~-- 71 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQL-----------------TT---TT------EI-- 71 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG-----------------GG---SS------EE--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccc-----------------cc---ch------hh--
Confidence 3568999999999999999999999999999999651 1112210 00 00 00
Q ss_pred CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEe---cCCCEEEcCEEEe
Q 022652 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL---VNGTRIYANIVIG 208 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~---~~g~~~~ad~vV~ 208 (294)
..+ +.....+.+.++.+.+.+.+ .++++++++ |+++..+++. +.+.+ .++.++.+|.||+
T Consensus 72 --------~~~-----~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~-~~v~~~~~~~~~~~~~d~vvl 136 (338)
T 3itj_A 72 --------ENF-----PGFPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKP-FKLWTEFNEDAEPVTTDAIIL 136 (338)
T ss_dssp --------CCS-----TTCTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSS-EEEEETTCSSSCCEEEEEEEE
T ss_pred --------ccc-----CCCcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCE-EEEEEEecCCCcEEEeCEEEE
Confidence 000 00001245666766666555 388999988 9999877666 54666 3667899999999
Q ss_pred cCCCCcH
Q 022652 209 CDGIRSP 215 (294)
Q Consensus 209 A~G~~S~ 215 (294)
|+|..+.
T Consensus 137 AtG~~~~ 143 (338)
T 3itj_A 137 ATGASAK 143 (338)
T ss_dssp CCCEEEC
T ss_pred CcCCCcC
Confidence 9998654
No 84
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.35 E-value=1.9e-12 Score=110.30 Aligned_cols=114 Identities=21% Similarity=0.202 Sum_probs=78.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC----CCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEE
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA----DSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVK 132 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~----~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 132 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+. ... +|. +. ... ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~--gg~--------------------~~-~~~-----~~~ 58 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAP--GGQ--------------------LT-TTT-----DVE 58 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCT--TCG--------------------GG-GCS-----EEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCC--Cce--------------------ee-ecc-----ccc
Confidence 3579999999999999999999999999999982 211 111 00 000 000
Q ss_pred cCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecC
Q 022652 133 SEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCD 210 (294)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~ 210 (294)
.+ +.....+.+.++.+.|.+.+ .++++++++ |+++..+++. +.|.+ ++.++.+|.||+|+
T Consensus 59 ----------~~-----~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~-~~v~~-~~~~~~~~~vv~A~ 120 (333)
T 1vdc_A 59 ----------NF-----PGFPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKP-FKLFT-DSKAILADAVILAI 120 (333)
T ss_dssp ----------CS-----TTCTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSS-EEEEC-SSEEEEEEEEEECC
T ss_pred ----------cC-----CCCccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCE-EEEEE-CCcEEEcCEEEECC
Confidence 00 00001245667777666554 478999886 9999876665 55777 77789999999999
Q ss_pred CCCcHh
Q 022652 211 GIRSPI 216 (294)
Q Consensus 211 G~~S~~ 216 (294)
|.++..
T Consensus 121 G~~~~~ 126 (333)
T 1vdc_A 121 GAVAKR 126 (333)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 998654
No 85
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.33 E-value=9.3e-12 Score=111.39 Aligned_cols=64 Identities=23% Similarity=0.358 Sum_probs=47.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEE---------------cccHHHHHHHcCCchhH
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTL---------------FKNGWSVLDALGVGSDL 119 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~---------------~~~~~~~l~~lg~~~~~ 119 (294)
...+||+|||||++||++|+.|+++|++|+|+|+.+.++....+... .+...++++++|+.+.+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~ 92 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRI 92 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGGE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCccee
Confidence 35789999999999999999999999999999999877422221111 24567888999986543
No 86
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.33 E-value=5.1e-12 Score=115.89 Aligned_cols=163 Identities=21% Similarity=0.179 Sum_probs=88.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCCc----CceEE--Ecc-cHHH-----HHHHc-CCc-hhHH
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTG----GTSLT--LFK-NGWS-----VLDAL-GVG-SDLR 120 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~~~~----g~~~~--~~~-~~~~-----~l~~l-g~~-~~~~ 120 (294)
..+||+|||||++|+++|+.|+++| ++|+||||....+.. ..++. +.. ...+ .++.- ++. ....
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3689999999999999999999999 999999998644211 01111 110 1111 11110 110 0100
Q ss_pred hcc----------ccccceEEEc-CCCcEEEEecCCCCCCCccee--eeeHHHHHHHHHhcC--CC-CceEeCCceeEEE
Q 022652 121 SQF----------LEIKGMAVKS-EDGRELRSFGFKDEDASQEVR--AVERRILLETLANQL--PP-ESVQFSSELAKIE 184 (294)
Q Consensus 121 ~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~--~~-v~i~~~~~v~~i~ 184 (294)
... ....++.+.. ..+... ...+.......... ......+.+.|.+.+ .+ +++++++.|+++.
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~-~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVN-VRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBC-CBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCccc-ccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 000 0001111111 111100 00000000000000 012346777777665 35 8999999999999
Q ss_pred EcCCceEEEEe---cCCC--EEEcCEEEecCCCCcHhhhhc
Q 022652 185 TSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPIAKWI 220 (294)
Q Consensus 185 ~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~~~~~ 220 (294)
.+++.+++|.. .+|+ .+.|+.||+|+|.+|.++...
T Consensus 163 ~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 163 VDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 87765444433 5665 689999999999999886544
No 87
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.32 E-value=6.3e-13 Score=117.42 Aligned_cols=51 Identities=18% Similarity=0.381 Sum_probs=40.3
Q ss_pred HHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 160 ~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
.+.+.+.+.. + +|+++++|++|+.++++ +.|.+.+|++++||.||+|.|..
T Consensus 208 ~l~~~~~~~~-g-~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEI-P-EIRLQTVVTGIDQSGDV-VNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTC-S-CEESSCCEEEEECSSSS-EEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhC-C-ceEeCCEEEEEEEcCCe-EEEEECCCCEEEeCEEEEecCcc
Confidence 3444444443 4 99999999999988777 45889888889999999999954
No 88
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.32 E-value=4.6e-12 Score=113.37 Aligned_cols=55 Identities=18% Similarity=0.140 Sum_probs=42.2
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+ .|++|+++++|++|..++++.+.|.+. +.++.||.||.|++.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHHH
Confidence 3555665555 378999999999999877665667764 457999999999987654
No 89
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.32 E-value=6.2e-12 Score=108.53 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.++||+|||||++|+++|++|+++|++|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 468999999999999999999999999999999763
No 90
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.31 E-value=1.3e-11 Score=108.79 Aligned_cols=58 Identities=16% Similarity=0.286 Sum_probs=44.2
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHhhhhcC
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPIAKWIG 221 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~ 221 (294)
.+.+.|.+.+ .|++|+++++|++|..++++ + | ..+|+++.||.||.|+|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-v-V-~~~g~~~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKK-V-Y-TRDNEEYSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTE-E-E-ETTCCEEECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCE-E-E-EeCCcEEEeCEEEECCCHHHHH-HhcC
Confidence 4555666555 37999999999999987766 4 5 4567789999999999988654 3444
No 91
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.31 E-value=1.4e-11 Score=113.03 Aligned_cols=159 Identities=23% Similarity=0.234 Sum_probs=88.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCc----CceEE--Ec---ccHHH-HHHH-c----CCc-hhHH
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG----GTSLT--LF---KNGWS-VLDA-L----GVG-SDLR 120 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~----g~~~~--~~---~~~~~-~l~~-l----g~~-~~~~ 120 (294)
..+||+|||||++|+++|+.|+++|++|+||||....+.. ..++. +. ....+ .+.. + ++. .+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4689999999999999999999999999999998643211 11121 11 11221 1111 1 111 1100
Q ss_pred h----c------cccccceEEEc-CCCcEEEEecCCCCCCC-----c--ceee---eeHHHHHHHHHhcC--CCCceEeC
Q 022652 121 S----Q------FLEIKGMAVKS-EDGRELRSFGFKDEDAS-----Q--EVRA---VERRILLETLANQL--PPESVQFS 177 (294)
Q Consensus 121 ~----~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~--~~~~---~~~~~l~~~L~~~~--~~v~i~~~ 177 (294)
. . .....++.+.. ..+..... .+...... . .... .....+.+.|.+.+ .+++++++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~-~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~ 175 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQR-AFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE 175 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEE-CCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceecc-ccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEc
Confidence 0 0 00001222211 11111100 00000000 0 0000 12346777777765 48999999
Q ss_pred CceeEEEEcCCceEEEEe---cCCC--EEEcCEEEecCCCCcHh
Q 022652 178 SELAKIETSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (294)
Q Consensus 178 ~~v~~i~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 216 (294)
+.|+++..+++.+.+|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 176 ~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 176 YFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred eEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 999999887665555554 4565 68999999999999875
No 92
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.31 E-value=5.9e-12 Score=115.23 Aligned_cols=159 Identities=22% Similarity=0.299 Sum_probs=87.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC------cCceEEEcc---cHHH-H----HHHc-CCc-hhHH
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT------GGTSLTLFK---NGWS-V----LDAL-GVG-SDLR 120 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~------~g~~~~~~~---~~~~-~----l~~l-g~~-~~~~ 120 (294)
..+||+|||||++|+++|+.|+++|.+|+||||....+. +|....+.. ...+ . ++.- ++. .++.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 368999999999999999999999999999999875421 111111111 1111 1 1111 111 1111
Q ss_pred hcc----------ccccceEEEc-CCCcEEEEecCCCCC-------CCccee--eeeHHHHHHHHHhcC--CCCceEeCC
Q 022652 121 SQF----------LEIKGMAVKS-EDGRELRSFGFKDED-------ASQEVR--AVERRILLETLANQL--PPESVQFSS 178 (294)
Q Consensus 121 ~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~l~~~L~~~~--~~v~i~~~~ 178 (294)
... ....++.+.. ..+..... .+.... ...... ......+.+.|.+.+ .+++|++++
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~-~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~ 164 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQR-PFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEE-CCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeee-ecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCc
Confidence 000 0011122211 11111100 000000 000000 011346666666655 489999999
Q ss_pred ceeEEEEc-CCceEEEEe---cCCC--EEEcCEEEecCCCCcHh
Q 022652 179 ELAKIETS-GNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (294)
Q Consensus 179 ~v~~i~~~-~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 216 (294)
+|+++..+ ++.+++|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 165 ~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 165 YALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 99999986 455555554 4565 58999999999999875
No 93
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.31 E-value=7e-12 Score=106.21 Aligned_cols=111 Identities=25% Similarity=0.315 Sum_probs=74.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.. + +|... .... +
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~~~---------------------~~~~---~------- 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A--GGLTA---------------------EAPL---V------- 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T--TGGGG---------------------GCSC---B-------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C--Ccccc---------------------ccch---h-------
Confidence 46899999999999999999999999999999953 2 22100 0000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
. .+. .. ..+...++.+.+.+.+ .++++++ .+|+++..+++. +.|.+ ++.++.+|.||+|+|.++
T Consensus 61 ---~--~~~----~~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 61 ---E--NYL----GF--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGG-FDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp ---C--CBT----TB--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTE-EEEEE-SSSEEEEEEEEECCCEEE
T ss_pred ---h--hcC----CC--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCE-EEEEE-CCCEEEeCEEEECCCCCc
Confidence 0 000 00 1234455655555444 3678877 789999877665 44666 556799999999999865
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 127 ~ 127 (319)
T 3cty_A 127 K 127 (319)
T ss_dssp C
T ss_pred c
Confidence 4
No 94
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.31 E-value=1.2e-11 Score=110.51 Aligned_cols=55 Identities=20% Similarity=0.218 Sum_probs=44.9
Q ss_pred HHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 160 ~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
.+.+.|.+.+..++|+++++|++|+.++++ +.|++.+| ++.||.||+|.+.+...
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~ 291 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGR-YRLKTDHG-PEYADYVLLTIPHPQVV 291 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTE-EEEECTTC-CEEESEEEECSCHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCE-EEEEECCC-eEECCEEEECCCHHHHH
Confidence 466677776644799999999999988777 66888888 79999999999976543
No 95
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.31 E-value=1.5e-11 Score=106.20 Aligned_cols=134 Identities=14% Similarity=0.186 Sum_probs=79.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
++||+|||||++|+++|..|++.|+ +|+|+|+.+ ++ +. +. ...-...+...........+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G--g~----------~~-~~~~~~~~~~~~~~~~~~g~~~--- 66 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG--HS----------FK-HWPKSTRTITPSFTSNGFGMPD--- 66 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT--HH----------HH-TSCTTCBCSSCCCCCGGGTCCC---
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC--Cc----------cc-cCcccccccCcchhcccCCchh---
Confidence 5799999999999999999999999 999999987 42 11 00 0000000000000000000000
Q ss_pred cEEEEecCCCCCCC----cceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecC
Q 022652 137 RELRSFGFKDEDAS----QEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCD 210 (294)
Q Consensus 137 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~ 210 (294)
+........ .....+.+..+.+.+.+.+ .+++++++++|+++..++++ +.|.+.++ ++.+|.||+|+
T Consensus 67 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g-~~~~d~vVlAt 139 (369)
T 3d1c_A 67 -----MNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-YTIATTTE-TYHADYIFVAT 139 (369)
T ss_dssp -----TTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-EEEEESSC-CEEEEEEEECC
T ss_pred -----hhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-EEEEeCCC-EEEeCEEEECC
Confidence 000000000 0011234555555554433 38899999999999987665 55888777 59999999999
Q ss_pred CCCcH
Q 022652 211 GIRSP 215 (294)
Q Consensus 211 G~~S~ 215 (294)
|.++.
T Consensus 140 G~~~~ 144 (369)
T 3d1c_A 140 GDYNF 144 (369)
T ss_dssp CSTTS
T ss_pred CCCCc
Confidence 99764
No 96
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.29 E-value=1.5e-11 Score=111.43 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+||+|||||++|+++|+.|++ |.+|+||||.+..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 46899999999999999999999 9999999998754
No 97
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.29 E-value=1.5e-11 Score=103.75 Aligned_cols=112 Identities=25% Similarity=0.326 Sum_probs=77.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
++||+|||||++|+++|..|+++|++|+|+|+.. +|... . ...+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~----gG~~~------------------------~--~~~~~----- 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF----GGQIL------------------------D--TVDIE----- 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST----TGGGG------------------------G--CCEEC-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC----Cceec------------------------c--ccccc-----
Confidence 3799999999999999999999999999998642 22100 0 00000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCC--ceEEEEecCCCEEEcCEEEecCCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGN--GVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~--~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
.+. ......+.++.+.+.+.+ .+++++++++|+.+..+.+ +.+.|.+++|+++.+|.||+|+|.+
T Consensus 46 -----~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 46 -----NYI------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp -----CBT------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred -----ccc------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 000 001134555666555444 3789999999999976532 2466888888889999999999987
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
+.
T Consensus 115 ~~ 116 (310)
T 1fl2_A 115 WR 116 (310)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 98
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.29 E-value=2.4e-11 Score=102.56 Aligned_cols=115 Identities=19% Similarity=0.259 Sum_probs=73.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCC--cCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRT--GGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~--~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
+.|||+|||||+||++||+.|+++|++|+|+|+....+. +|. +. ....+.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~--------------------~~------~~~~i~-- 54 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQ--------------------LT------TTTIIE-- 54 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCG--------------------GG------GSSEEC--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCC--------------------cC------ChHHhh--
Confidence 469999999999999999999999999999999763210 111 00 000000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (294)
++. .....+...++.+.+.+.+ .+.++. ...+.......+. ..+.+.++.++.+|.||+|+|.
T Consensus 55 --------~~~-----g~~~~i~~~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 55 --------NFP-----GFPNGIDGNELMMNMRTQSEKYGTTII-TETIDHVDFSTQP-FKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp --------CST-----TCTTCEEHHHHHHHHHHHHHHTTCEEE-CCCEEEEECSSSS-EEEEETTCCEEEEEEEEECCCE
T ss_pred --------hcc-----CCcccCCHHHHHHHHHHHHhhcCcEEE-EeEEEEeecCCCc-eEEEECCCeEEEEeEEEEcccc
Confidence 000 0001244556665555444 255555 4456666655555 3467788889999999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 120 ~~ 121 (314)
T 4a5l_A 120 TA 121 (314)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 99
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.29 E-value=1.8e-11 Score=109.31 Aligned_cols=60 Identities=13% Similarity=0.010 Sum_probs=44.3
Q ss_pred HHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEec-CCCEEEcCEEEecCCCCcHhhh
Q 022652 158 RRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELV-NGTRIYANIVIGCDGIRSPIAK 218 (294)
Q Consensus 158 ~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~-~g~~~~ad~vV~A~G~~S~~~~ 218 (294)
...+.+.|.+.+ .+++++++++| ++..+++.+.++... ++.++.+|.||+|+|.++.+..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCc
Confidence 456666666654 48999999999 998776665455543 2225789999999999998754
No 100
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.29 E-value=5.6e-11 Score=107.52 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=43.0
Q ss_pred HHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+ +++|+++++|++|..++++ +.|.+.+|+++.||.||.|.+....
T Consensus 216 ~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLL-GDRVKLERPVIYIDQTREN-VLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHH-GGGEESSCCEEEEECSSSS-EEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHc-CCcEEcCCeeEEEEECCCe-EEEEECCCeEEEeCEEEECCCHHHH
Confidence 3444454444 5789999999999987777 4488999989999999999998764
No 101
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.29 E-value=1.2e-11 Score=105.61 Aligned_cols=112 Identities=17% Similarity=0.279 Sum_probs=75.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|++.|++|+|+|+.. + +|... .....
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~~~---------------------~~~~~---------- 58 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-F--GGALM---------------------TTTDV---------- 58 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-C--SCGGG---------------------SCSCB----------
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-C--CCcee---------------------ccchh----------
Confidence 46899999999999999999999999999999752 2 22100 00000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEE-EecCCCEEEcCEEEecCCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTIL-ELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v-~~~~g~~~~ad~vV~A~G~~ 213 (294)
. .+ +.....+.+.++.+.+.+.+ .++++++++ |+++.. ++. +.| .+.+++++.+|.||+|+|.+
T Consensus 59 ---~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 59 ---E--NY-----PGFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGP-LKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp ---C--CS-----TTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-SEEEEETTSCEEEEEEEEECCCEE
T ss_pred ---h--hc-----CCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-EEEEEeCCCCEEEeCEEEECCCCC
Confidence 0 00 00001134455655555443 378998886 888876 333 446 77788889999999999986
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
+.
T Consensus 126 ~~ 127 (335)
T 2a87_A 126 AR 127 (335)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 102
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.28 E-value=1.3e-11 Score=104.55 Aligned_cols=112 Identities=17% Similarity=0.303 Sum_probs=74.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.. + +|... ......
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~--gg~~~---------------------~~~~~~--------- 50 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-K--GGQLT---------------------TTTEVE--------- 50 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-T--TGGGG---------------------GCSBCC---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-C--CceEe---------------------cchhhh---------
Confidence 35799999999999999999999999999999752 2 22100 000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.+ +.....+.+.++.+.+.+.+ .++++++++ |+++..+++. +.+ +.++.++.+|.||+|+|..+
T Consensus 51 ------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~-~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 51 ------NW-----PGDPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRP-FRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp ------CS-----TTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-EEE-EESSCEEEEEEEEECCCEEE
T ss_pred ------hC-----CCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCE-EEE-EeCCCEEEcCEEEECCCCCc
Confidence 00 00001134455555554443 378898886 8888876655 546 66777899999999999865
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 117 ~ 117 (320)
T 1trb_A 117 R 117 (320)
T ss_dssp C
T ss_pred C
Confidence 4
No 103
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.28 E-value=2e-11 Score=103.10 Aligned_cols=35 Identities=37% Similarity=0.527 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|||+|||||+||+++|+.|+++|++|+|+|+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999999999999864
No 104
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.27 E-value=6.2e-10 Score=98.53 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEE-cCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIET-SGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
++.+.|.+.+ .|++++++++|++|.. +++++++|++.+|+++.||.||.|.|.+
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4445555444 4799999999999998 5556678999999889999999999976
No 105
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.27 E-value=2.8e-11 Score=109.38 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 158 RRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 158 ~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
...+.+.|.+.+++.+|+++++|++|..++++.+.|++.+|+++.||.||.|.+....
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 4556666777666568999999999998643336689999988999999999986543
No 106
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.27 E-value=1.6e-11 Score=110.77 Aligned_cols=52 Identities=17% Similarity=0.247 Sum_probs=41.4
Q ss_pred HHHHHHHHHhcCC--CCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCC
Q 022652 158 RRILLETLANQLP--PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGI 212 (294)
Q Consensus 158 ~~~l~~~L~~~~~--~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 212 (294)
...+.+.|.+.+. +++++++++|++|..++.. +.+.+|+++.||.||.+.-.
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~---v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT---VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE---EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE---EEEcCCCEEECCEEEECCCH
Confidence 3467788888773 7889999999999876654 57889999999999976553
No 107
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.26 E-value=3.8e-11 Score=107.92 Aligned_cols=55 Identities=7% Similarity=0.064 Sum_probs=43.0
Q ss_pred HHHHHHHhcC--CC-CceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQL--PP-ESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~--~~-v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+ .| ++|+++++|++|..++++ +.|.+.+|+++.||.||+|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-ARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-EEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-EEEEECCCCEEEcCEEEECCCHHHH
Confidence 4445555544 24 679999999999987776 5588888888999999999997654
No 108
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.26 E-value=3.1e-11 Score=107.63 Aligned_cols=146 Identities=19% Similarity=0.137 Sum_probs=80.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-----CceEEEecCCCCCCcCce----EEEcccHHHHHHHcCCchhHHhcccccc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG-----IGSLVIEQADSLRTGGTS----LTLFKNGWSVLDALGVGSDLRSQFLEIK 127 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G-----~~V~vlE~~~~~~~~g~~----~~~~~~~~~~l~~lg~~~~~~~~~~~~~ 127 (294)
..+||+|||||++|+++|..|+++| ++|+|||+.+.++..... ..+.. ..++.+.. +......+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~---~~~~~l~~---~~~p~~~~~ 102 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQI---SFLKDLVS---LRNPTSPYS 102 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSS---CTTSSSST---TTCTTCTTS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCc---chhhcccc---ccCCCCCCC
Confidence 4679999999999999999999999 999999999866311100 00000 00000000 000000000
Q ss_pred ceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcC--CceE--EEEecCCC--
Q 022652 128 GMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVT--ILELVNGT-- 199 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~--~~~~--~v~~~~g~-- 199 (294)
...+....+.. ..+ .........+.++.+.+...+ .+++++++++|+++..++ ++.| .|.+.+++
T Consensus 103 ~~~~l~~~~~~---~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~ 175 (463)
T 3s5w_A 103 FVNYLHKHDRL---VDF----INLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE 175 (463)
T ss_dssp HHHHHHHTTCH---HHH----HHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC
T ss_pred hhHhhhhcCce---eec----ccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc
Confidence 00000000000 000 000011234566666664443 268999999999998762 3333 57777765
Q ss_pred --EEEcCEEEecCCCCcH
Q 022652 200 --RIYANIVIGCDGIRSP 215 (294)
Q Consensus 200 --~~~ad~vV~A~G~~S~ 215 (294)
++.+|.||+|+|....
T Consensus 176 ~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 176 ELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEEESEEEECCCCEEC
T ss_pred eEEEEeCEEEECCCCCCC
Confidence 7999999999998544
No 109
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.26 E-value=5.4e-10 Score=99.27 Aligned_cols=55 Identities=9% Similarity=-0.041 Sum_probs=43.1
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEc--CCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETS--GNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+ .|++++++++|++|..+ +++++.|.+ +|+++.||.||.|.|.++.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 4555565554 47899999999999987 566556776 4778999999999999865
No 110
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.23 E-value=3.7e-11 Score=108.62 Aligned_cols=115 Identities=26% Similarity=0.335 Sum_probs=79.4
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 55 DVRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 55 ~~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
....+||+|||||++|+++|+.|+++|++|+|+|+.. +|... ...++.
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~----GG~~~----------~~~~~~------------------ 256 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF----GGQVL----------DTVDIE------------------ 256 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST----TGGGT----------TCSCBC------------------
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC----CCccc----------cccccc------------------
Confidence 3457899999999999999999999999999998642 22100 000000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcC--CceEEEEecCCCEEEcCEEEecC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILELVNGTRIYANIVIGCD 210 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~~ad~vV~A~ 210 (294)
.+ .........++.+.+.+.+ .+++++.+++|+++..+. ++.+.|.+.+|.++.+|.||+|+
T Consensus 257 --------~~------~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAt 322 (521)
T 1hyu_A 257 --------NY------ISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIAT 322 (521)
T ss_dssp --------CB------TTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECC
T ss_pred --------cc------CCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECC
Confidence 00 0000134455666555544 388999999999997542 23466888888889999999999
Q ss_pred CCCcH
Q 022652 211 GIRSP 215 (294)
Q Consensus 211 G~~S~ 215 (294)
|.++.
T Consensus 323 G~~~~ 327 (521)
T 1hyu_A 323 GAKWR 327 (521)
T ss_dssp CEEEC
T ss_pred CCCcC
Confidence 98654
No 111
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.23 E-value=5e-11 Score=110.29 Aligned_cols=152 Identities=19% Similarity=0.236 Sum_probs=84.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHH---H-cCCceEEEecCCCCCCcC--ce-EEEc-----------ccH-HHHHHH-----
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQ---R-LGIGSLVIEQADSLRTGG--TS-LTLF-----------KNG-WSVLDA----- 112 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~---~-~G~~V~vlE~~~~~~~~g--~~-~~~~-----------~~~-~~~l~~----- 112 (294)
..+||+|||||++||++|+.|+ + +|.+|+||||....+.+. .+ .... ... ...++.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 4689999999999999999999 6 899999999987432211 11 1111 011 111111
Q ss_pred cCCc-hhHHhc----------cccccceEEEc-CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--C-CC-ceEe
Q 022652 113 LGVG-SDLRSQ----------FLEIKGMAVKS-EDGRELRSFGFKDEDASQEVRAVERRILLETLANQL--P-PE-SVQF 176 (294)
Q Consensus 113 lg~~-~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~v-~i~~ 176 (294)
.++. .++... .....++.+.. ..+... .. ......+....+.+.|.+.+ . |+ ++++
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~-----~~---~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~ 172 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYV-----RE---GQWQIMIHGESYKPIIAEAAKMAVGEENIYE 172 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBC-----BS---SSSCEEEEETTHHHHHHHHHHHHHCGGGEEC
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCcc-----CC---CccccCCCcHHHHHHHHHHHHhcCCCcEEEe
Confidence 1221 111000 00001111111 111100 00 00011122334445554444 2 89 9999
Q ss_pred CCceeEEEEcCC---ceEEEEe---cCCC--EEEcCEEEecCCCCcHh
Q 022652 177 SSELAKIETSGN---GVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (294)
Q Consensus 177 ~~~v~~i~~~~~---~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 216 (294)
++.|+++..+++ .+++|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 173 ~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 173 RVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp SEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 999999998766 6655543 4565 68999999999999864
No 112
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.21 E-value=3.7e-11 Score=110.97 Aligned_cols=58 Identities=19% Similarity=0.069 Sum_probs=44.4
Q ss_pred HHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEe---cCCC--EEEcCEEEecCCCCcHh
Q 022652 159 RILLETLANQL--PPESVQFSSELAKIETSGNGVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (294)
Q Consensus 159 ~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 216 (294)
..+...|.+.+ .|++|++++.|+++..+++.+.+|.. .+|+ .+.||.||+|+|.++.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 45667776665 38999999999999876665444543 4565 58999999999999865
No 113
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.20 E-value=2.3e-11 Score=104.43 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=38.7
Q ss_pred eeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 154 RAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 154 ~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
..++...+.+.|.+.+ .|++++. ++|++++..+ .+.||.||+|+|.+|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~------------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA------------REGADVIVNCTGVWAG 187 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH------------HTTCSEEEECCGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh------------cCCCCEEEECCCcChH
Confidence 4678889999998877 5888888 8887774321 1579999999999986
No 114
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.20 E-value=1.6e-10 Score=97.39 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=72.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEE-EecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLV-IEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~v-lE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
.++||+|||||++|+++|..|+++|++|+| +|+ +.+ +|.... ...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~--gG~~~~---------------------~~~---------- 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMP--GGQITS---------------------SSE---------- 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SST--TGGGGG---------------------CSC----------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCC--Cceeee---------------------ece----------
Confidence 468999999999999999999999999999 999 433 221000 000
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcC--CceEEEEe-cCCCEEEcCEEEecC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSG--NGVTILEL-VNGTRIYANIVIGCD 210 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~--~~~~~v~~-~~g~~~~ad~vV~A~ 210 (294)
. ..+ +.....+...++...+.+.+ .+++++++ +|+++ .++ +. +.+.. .++ ++.+|.||+|+
T Consensus 49 ---~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~-~~v~~~~~~-~~~~d~lvlAt 114 (315)
T 3r9u_A 49 ---I--ENY-----PGVAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGS-FTIKLEGGK-TELAKAVIVCT 114 (315)
T ss_dssp ---B--CCS-----TTCCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSC-EEEEETTSC-EEEEEEEEECC
T ss_pred ---e--ccC-----CCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCc-EEEEEecCC-EEEeCEEEEee
Confidence 0 000 00011245566666666554 37888888 89999 665 44 54423 334 89999999999
Q ss_pred CCCc
Q 022652 211 GIRS 214 (294)
Q Consensus 211 G~~S 214 (294)
|...
T Consensus 115 G~~~ 118 (315)
T 3r9u_A 115 GSAP 118 (315)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9743
No 115
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.18 E-value=6.3e-11 Score=109.44 Aligned_cols=61 Identities=10% Similarity=-0.037 Sum_probs=44.0
Q ss_pred eeHHHHHHHHHhcC----CCCceEeCCceeEEEEcCC---ceEEEEe---cCCC--EEEcCEEEecCCCCcHh
Q 022652 156 VERRILLETLANQL----PPESVQFSSELAKIETSGN---GVTILEL---VNGT--RIYANIVIGCDGIRSPI 216 (294)
Q Consensus 156 ~~~~~l~~~L~~~~----~~v~i~~~~~v~~i~~~~~---~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 216 (294)
+....+.+.|.+.+ .+++++.++.|+++..+++ .+.+|.. .+|+ .+.|+.||+|+|.++.+
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 34445555555444 2899999999999988766 5555543 3454 58999999999998864
No 116
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.15 E-value=7.3e-10 Score=97.54 Aligned_cols=38 Identities=34% Similarity=0.594 Sum_probs=35.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G-~~V~vlE~~~~~~ 94 (294)
..+||+|||||++||++|+.|+++| ++|+|+|+.+.++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 4689999999999999999999999 9999999988763
No 117
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.15 E-value=8.4e-10 Score=97.99 Aligned_cols=38 Identities=42% Similarity=0.670 Sum_probs=35.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
.++||+|||||++||++|+.|+++|++|+|+|+++.++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 35799999999999999999999999999999998764
No 118
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.14 E-value=3.5e-10 Score=101.51 Aligned_cols=54 Identities=15% Similarity=0.291 Sum_probs=43.0
Q ss_pred HHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCC---CEEEcCEEEecCCCC
Q 022652 159 RILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG---TRIYANIVIGCDGIR 213 (294)
Q Consensus 159 ~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g---~~~~ad~vV~A~G~~ 213 (294)
..|.+.|.+.+...+|+++++|++|..++++ +.|.+.+| +++.||.||.|....
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEG-VTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCe-EEEEEecCCeEEEEECCEEEECCCHH
Confidence 3567777776643789999999999988877 44888776 579999999999865
No 119
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.12 E-value=6.9e-10 Score=104.20 Aligned_cols=50 Identities=24% Similarity=0.311 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 160 ILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 160 ~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
.+.+.|.+ +++|+++++|++|..++++ +.|++.+|+++.||.||+|....
T Consensus 535 ~l~~aLa~---gl~I~l~t~V~~I~~~~~~-v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 535 VIIEKLAE---GLDIQLKSPVQCIDYSGDE-VQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp HHHHHHHT---TSCEESSCCEEEEECSSSS-EEEEETTCCEEEESEEEECCCHH
T ss_pred HHHHHHHh---CCcEEcCCeeEEEEEcCCE-EEEEECCCcEEEcCEEEECCCHH
Confidence 45555554 6689999999999988877 55899999889999999999643
No 120
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.10 E-value=5.4e-10 Score=97.09 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=72.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.+.+|+|||||+||+++|..|++.+.+|+|+|+.+...... +.....+. +.. .
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~------~~l~~~l~--g~~--------~----------- 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR------PRLNEIIA--KNK--------S----------- 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG------GGHHHHHH--SCC--------C-----------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc------ChhhHHHc--CCC--------C-----------
Confidence 46789999999999999999988899999999998652100 00000000 000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.... .....+ .+.+ .+++++++++|+++..+... |.+.+|+++.+|.||+|+|...
T Consensus 61 -------------~~~l-~~~~~~---~~~~--~~i~~~~~~~V~~id~~~~~---v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 61 -------------IDDI-LIKKND---WYEK--NNIKVITSEFATSIDPNNKL---VTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp -------------GGGT-BSSCHH---HHHH--TTCEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -------------HHHc-cCCCHH---HHHH--CCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEecCCCc
Confidence 0000 011111 1111 28899999999999866543 7888998999999999999743
No 121
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.10 E-value=2.3e-10 Score=101.03 Aligned_cols=111 Identities=16% Similarity=0.264 Sum_probs=71.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
+.+||+|||||++|+++|..|+++|. +|+|+|+.+...... +. +...+..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~------~~---------l~~~~~~------------- 54 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL------PP---------LSKAYLA------------- 54 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS------GG---------GGTTTTT-------------
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC------CC---------CcHHHhC-------------
Confidence 35899999999999999999999998 799999886531000 00 0000000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+. ....... .. +.+.+.+ .+++++++++|+.+..++.. |.+.+|+++.+|.||+|+|..+
T Consensus 55 -~~----------~~~~~~~-~~---~~~~~~~--~gv~~~~~~~v~~i~~~~~~---v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 55 -GK----------ATAESLY-LR---TPDAYAA--QNIQLLGGTQVTAINRDRQQ---VILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp -TC----------SCSGGGB-SS---CHHHHHH--TTEEEECSCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -CC----------CChHHhc-cc---CHHHHHh--CCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEcCCCCc
Confidence 00 0000000 00 0112212 27899999999999865432 6778888899999999999865
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 115 ~ 115 (431)
T 1q1r_A 115 R 115 (431)
T ss_dssp C
T ss_pred c
Confidence 4
No 122
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.10 E-value=3e-10 Score=101.45 Aligned_cols=37 Identities=32% Similarity=0.623 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 5789999999999999999999999999999998765
No 123
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.08 E-value=1.4e-10 Score=95.50 Aligned_cols=37 Identities=30% Similarity=0.461 Sum_probs=34.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
.+||+||||||+||+||+.|+++|++|+||||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 5799999999999999999999999999999998774
No 124
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.07 E-value=1.4e-10 Score=101.98 Aligned_cols=110 Identities=19% Similarity=0.334 Sum_probs=71.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCc--eEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIG--SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~--V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
.++||+|||||++|+++|..|+++|.+ |+|+|+.+.....-. + +...+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-----~----------l~~~~~~------------- 59 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-----P----------LSKEYLA------------- 59 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-----G----------GGTTTTT-------------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-----c----------CCHHHHc-------------
Confidence 468999999999999999999999987 999999875421000 0 0000000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+ ....... ...... .+.+ .+++++.+++|+.+..+... |.+.+++.+.+|.+|+|+|...
T Consensus 60 -~----------~~~~~~~-~~~~~~---~~~~--~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 60 -R----------EKTFERI-CIRPAQ---FWED--KAVEMKLGAEVVSLDPAAHT---VKLGDGSAIEYGKLIWATGGDP 119 (415)
T ss_dssp -T----------SSCSGGG-BSSCHH---HHHH--TTEEEEETCCEEEEETTTTE---EEETTSCEEEEEEEEECCCEEC
T ss_pred -C----------CCCHHHh-ccCCHH---HHHH--CCcEEEeCCEEEEEECCCCE---EEECCCCEEEeeEEEEccCCcc
Confidence 0 0000000 011111 1111 27899999999999765432 7788888999999999999643
No 125
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.06 E-value=1.1e-08 Score=90.25 Aligned_cols=55 Identities=11% Similarity=0.003 Sum_probs=43.0
Q ss_pred HHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+ .|++++++++|++|..++++++.|. .+|+++.||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEECCCCCcc
Confidence 5555565544 3789999999999998877755455 46778999999999999875
No 126
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.06 E-value=4.5e-10 Score=98.43 Aligned_cols=107 Identities=12% Similarity=0.150 Sum_probs=70.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
.++||+|||||++|+++|..|++.|. +|+|+|+.+....... +....++... . ...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-----~~~~~~~~~~---------~--~~~------ 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-----PLSKDFMAHG---------D--AEK------ 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-----GGGTHHHHHC---------C--GGG------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-----CCCHHHhCCC---------c--hhh------
Confidence 46899999999999999999999998 4999999875421100 0000111100 0 000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
. .+. ..+. .+++++++++|+.+..+.. .|.+.+|+++.+|.||+|+|...
T Consensus 64 ----------------~---~~~-------~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 64 ----------------I---RLD-------CKRA-PEVEWLLGVTAQSFDPQAH---TVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ----------------S---BCC-------CTTS-CSCEEEETCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred ----------------h---hHH-------HHHH-CCCEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCC
Confidence 0 000 0111 2789999999999976543 36778888899999999999855
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 114 ~ 114 (408)
T 2gqw_A 114 R 114 (408)
T ss_dssp C
T ss_pred C
Confidence 4
No 127
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.05 E-value=2.7e-10 Score=101.09 Aligned_cols=105 Identities=17% Similarity=0.258 Sum_probs=67.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
++||+|||||++|+++|+.|++. |++|+|+|+.+....... .+.. .+ .
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--~~p~-------------~~-------------~-- 52 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--GIPY-------------VV-------------E-- 52 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--CCcc-------------cc-------------C--
Confidence 57999999999999999999998 889999999985521110 0000 00 0
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHH----HHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCC-CEEEcCEEEecC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILL----ETLANQLPPESVQFSSELAKIETSGNGVTILELVNG-TRIYANIVIGCD 210 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~~ad~vV~A~ 210 (294)
+. ....++. +.+.+. .+++++++++|+++..+ . +.|.+.++ .++.+|.||+|+
T Consensus 53 ~~------------------~~~~~~~~~~~~~~~~~-~gi~v~~~~~v~~i~~~--~-~~v~~~~g~~~~~~d~lviAt 110 (449)
T 3kd9_A 53 GL------------------STPDKLMYYPPEVFIKK-RGIDLHLNAEVIEVDTG--Y-VRVRENGGEKSYEWDYLVFAN 110 (449)
T ss_dssp -------------------------------CTHHHH-TTCEEETTCEEEEECSS--E-EEEECSSSEEEEECSEEEECC
T ss_pred CC------------------CCHHHhhhcCHHHHHHh-cCcEEEecCEEEEEecC--C-CEEEECCceEEEEcCEEEECC
Confidence 00 0000000 111111 27899999999988533 2 44677776 379999999999
Q ss_pred CCCc
Q 022652 211 GIRS 214 (294)
Q Consensus 211 G~~S 214 (294)
|...
T Consensus 111 G~~p 114 (449)
T 3kd9_A 111 GASP 114 (449)
T ss_dssp CEEE
T ss_pred CCCC
Confidence 9644
No 128
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.04 E-value=1.4e-10 Score=102.60 Aligned_cols=108 Identities=17% Similarity=0.270 Sum_probs=69.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
+.||+|||||++|+++|..|++ .|++|+|+|+.+.... .+....... +.. .
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~~--g~~--------~--------- 57 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------VPSNPWVGV--GWK--------E--------- 57 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------GGGHHHHHH--TSS--------C---------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------cCCcccccc--Ccc--------C---------
Confidence 4699999999999999999999 8999999999884311 110000000 000 0
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.... ... +.+.+ +. .+++++ ..+|+++..+.+. |.+++++++.+|.||+|+|...
T Consensus 58 ---------------~~~~-~~~---l~~~~-~~-~gv~~~-~~~v~~id~~~~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 58 ---------------RDDI-AFP---IRHYV-ER-KGIHFI-AQSAEQIDAEAQN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp ---------------HHHH-EEE---CHHHH-HT-TTCEEE-CSCEEEEETTTTE---EEETTSCEEECSEEEECCCCEE
T ss_pred ---------------HHHH-HHH---HHHHH-HH-CCCEEE-EeEEEEEEcCCCE---EEECCCCEEECCEEEECCCCCc
Confidence 0000 000 11111 11 277886 5689999765542 7888888899999999999866
Q ss_pred Hh
Q 022652 215 PI 216 (294)
Q Consensus 215 ~~ 216 (294)
..
T Consensus 113 ~~ 114 (437)
T 3sx6_A 113 AF 114 (437)
T ss_dssp CG
T ss_pred Cc
Confidence 54
No 129
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.04 E-value=2.4e-10 Score=102.23 Aligned_cols=37 Identities=32% Similarity=0.650 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 3589999999999999999999999999999997655
No 130
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.03 E-value=9e-10 Score=97.83 Aligned_cols=111 Identities=15% Similarity=0.156 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
+||+|||||++|+++|..|+++ |++|+|+|+.+.++....+...... +
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~------------------------------~ 52 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFN------------------------------H 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhc------------------------------C
Confidence 5899999999999999999998 9999999999865311111000000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-cCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~~~~ad~vV~A~G~~S~ 215 (294)
... . ...........+ .+ .+++++++++|+++..+... +.+.. .++.++.+|.+|+|+|....
T Consensus 53 ~~~---~------~~~~~~~~~~~~----~~--~gi~~~~~~~V~~id~~~~~-v~v~~~~~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 53 TIN---E------LHEARYITEEEL----RR--QKIQLLLNREVVAMDVENQL-IAWTRKEEQQWYSYDKLILATGASQF 116 (452)
T ss_dssp -----------------CCCCHHHH----HH--TTEEEECSCEEEEEETTTTE-EEEEETTEEEEEECSEEEECCCCCBC
T ss_pred CCC---C------HHHhhcCCHHHH----HH--CCCEEEECCEEEEEECCCCE-EEEEecCceEEEEcCEEEECCCcccC
Confidence 000 0 000000011121 11 27788899999999876655 43432 24557999999999998554
No 131
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.03 E-value=1.1e-09 Score=95.91 Aligned_cols=107 Identities=18% Similarity=0.300 Sum_probs=70.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCc--eEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIG--SLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~--V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+.....-. + +...+......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-----~----------l~~~~~~g~~~----------- 56 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-----S----------LSKAVLDGSLE----------- 56 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-----G----------GGTHHHHTSSS-----------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-----c----------ccHHHhCCCCC-----------
Confidence 4899999999999999999999987 999999886421000 0 00000000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.... ....++. .+ .+++++.+++|+.+..+... |.+.+|+++.+|.+|+|+|...
T Consensus 57 -------------~~~~--~~~~~~~---~~--~~i~~~~~~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 57 -------------RPPI--LAEADWY---GE--ARIDMLTGPEVTALDVQTRT---ISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp -------------SCCB--SSCTTHH---HH--TTCEEEESCCEEEEETTTTE---EEETTSCEEECSEEEECCCEEE
T ss_pred -------------HHHh--cCCHHHH---HH--CCCEEEeCCEEEEEECCCCE---EEECCCCEEECCEEEEccCCcc
Confidence 0000 0111111 11 28899999999999765432 7888888999999999999753
No 132
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.03 E-value=1.7e-09 Score=93.94 Aligned_cols=100 Identities=21% Similarity=0.332 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||+.|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~--------------------------------------- 185 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLL--------------------------------------- 185 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhccc---------------------------------------
Confidence 56899999999999999999999999999999875421000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
+. -....+.+.+.+ .|++++++++|+++..++++ +.|.+.+|+++.+|.||.|+|..+.
T Consensus 186 ------------~~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 186 ------------HP----AAAKAVQAGLEG--LGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp ------------CH----HHHHHHHHHHHT--TTCEEEESCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred ------------CH----HHHHHHHHHHHH--cCCEEEeCCEEEEEEecCCE-EEEEECCCCEEECCEEEECcCCCcC
Confidence 00 001122233322 38999999999999877665 5588889989999999999998764
No 133
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.02 E-value=8.9e-09 Score=92.64 Aligned_cols=62 Identities=24% Similarity=0.347 Sum_probs=47.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceE-------E--------EcccHHHHHHHcCCchh
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSL-------T--------LFKNGWSVLDALGVGSD 118 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~-------~--------~~~~~~~~l~~lg~~~~ 118 (294)
..+||+|||||++||++|+.|+++|++|+|+|+.+.++....+. . ..+...++++++|+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 46899999999999999999999999999999998774321111 1 12456788899998654
No 134
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.02 E-value=2.9e-10 Score=99.73 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=32.4
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCceEEEecCCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQR---LGIGSLVIEQADSL 93 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~---~G~~V~vlE~~~~~ 93 (294)
.||+|||||++|+++|..|++ .|++|+|+|+.+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 479999999999999999999 89999999999843
No 135
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.02 E-value=1.8e-09 Score=95.90 Aligned_cols=101 Identities=19% Similarity=0.252 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+... +..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~-------------------- 208 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------FDP-------------------- 208 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------hhH--------------------
Confidence 468999999999999999999999999999998754210 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
-....+.+.|.+. |++++++++|+++..++++.+.|.+.+|+++.+|.||.|+|..+..
T Consensus 209 ------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 ------------------MISETLVEVMNAE--GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp ------------------HHHHHHHHHHHHH--SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 0011223333332 8999999999999887655456888899889999999999987653
No 136
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.01 E-value=7.5e-10 Score=98.88 Aligned_cols=36 Identities=28% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~ 93 (294)
++||+|||||++|+++|..|+++ |++|+|+|+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46899999999999999999999 9999999999865
No 137
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.01 E-value=1.7e-09 Score=96.10 Aligned_cols=100 Identities=21% Similarity=0.305 Sum_probs=75.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.. ..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~~------------------~~-------------------- 208 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTM------------------DL-------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccccc------------------CH--------------------
Confidence 4689999999999999999999999999999987542100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
--...+.+.|.+ .|++++++++|+++..++++ +.+.+.+|+++.+|.||.|+|..+..
T Consensus 209 ------------------~~~~~l~~~l~~--~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 209 ------------------EVSRAAERVFKK--QGLTIRTGVRVTAVVPEAKG-ARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp ------------------HHHHHHHHHHHH--HTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEECC
T ss_pred ------------------HHHHHHHHHHHH--CCCEEEECCEEEEEEEeCCE-EEEEECCCeEEEcCEEEECcCCCcCC
Confidence 001122233322 28999999999999987665 45777788889999999999987754
No 138
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.01 E-value=1.1e-10 Score=104.61 Aligned_cols=37 Identities=24% Similarity=0.489 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3689999999999999999999999999999997755
No 139
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.01 E-value=6.4e-09 Score=91.28 Aligned_cols=99 Identities=24% Similarity=0.321 Sum_probs=76.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~--------------------------------------- 192 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVA--------------------------------------- 192 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhc---------------------------------------
Confidence 56899999999999999999999999999999886521100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
...+.+.+.+.+ .|++++++++|+++..+++++..|.+.+|+++.||.||.|+|....
T Consensus 193 --------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 193 --------------------GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp --------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred --------------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 011122222221 3899999999999998766666799999999999999999998654
No 140
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.99 E-value=7.2e-09 Score=90.66 Aligned_cols=98 Identities=20% Similarity=0.317 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~--------------------------------------- 182 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVV--------------------------------------- 182 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhcc---------------------------------------
Confidence 46899999999999999999999999999999886521100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
...+.+.+.+.+ .|++++++++|+++..+++++..|.+.+|+++.+|.||.|+|...
T Consensus 183 --------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 --------------------TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp --------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred --------------------CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 011222222222 389999999999999877666678999999999999999999854
No 141
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.99 E-value=4.9e-10 Score=98.10 Aligned_cols=106 Identities=20% Similarity=0.281 Sum_probs=68.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.||+|||||++|+++|..|+++|+ +|+|+|+.+....... .+...+.. +
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~---------------~l~~~~l~--------------~ 52 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP---------------PLSKAYLK--------------S 52 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG---------------GGGTGGGG--------------S
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc---------------cCCHHHHC--------------C
Confidence 589999999999999999999999 8999999885421000 00000000 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
. ....... .... +.+.+ .+++++. ++|+++..+... |.+.+|+++.+|.+|+|+|..
T Consensus 53 ---------~-~~~~~~~-~~~~---~~~~~--~~i~~~~-~~v~~id~~~~~---v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 53 ---------G-GDPNSLM-FRPE---KFFQD--QAIELIS-DRMVSIDREGRK---LLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp ---------C-CCTTSSB-SSCH---HHHHH--TTEEEEC-CCEEEEETTTTE---EEESSSCEEECSEEEECCCEE
T ss_pred ---------C-CCHHHcc-CCCH---HHHHh--CCCEEEE-EEEEEEECCCCE---EEECCCCEEECCEEEEeeCCC
Confidence 0 0000000 1111 11111 2778888 899999765443 778888899999999999974
No 142
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.98 E-value=4.4e-10 Score=100.16 Aligned_cols=141 Identities=15% Similarity=0.200 Sum_probs=75.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEE-cccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTL-FKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~-~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
++||+|||||++|+++|..|+++|++|+|+|+.. . +|..... ......++...++++.+..... ..++. . .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~--gG~~~~~g~~psk~ll~~~~~~~~~~~~~~-~~g~~--~--~ 74 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-W--GGVCLNVGCIPSKALLRNAELVHIFTKDAK-AFGIS--G--E 74 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-T--THHHHHHSHHHHHHHHHHHHHHHHHHHHTT-TTTEE--E--C
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-C--CCcccccCchhhHHHHHHHHHHHHHHHHHH-hcCCC--C--C
Confidence 4799999999999999999999999999999983 3 2221100 0012223333333333221110 11111 0 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCC--CEEEcCEEEecCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGI 212 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~ 212 (294)
. ..++.... .... -....+.+.+.+.+ .+++++.++.+. .+++. +.|.+.+| +++.+|.||+|+|.
T Consensus 75 ~---~~~~~~~~-~~~~--~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~-v~V~~~~G~~~~~~~d~lViAtG~ 144 (464)
T 2a8x_A 75 V---TFDYGIAY-DRSR--KVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANT-LLVDLNDGGTESVTFDNAIIATGS 144 (464)
T ss_dssp C---EECHHHHH-HHHH--HHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSE-EEEEETTSCCEEEEEEEEEECCCE
T ss_pred C---ccCHHHHH-HHHH--HHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCe-EEEEeCCCceEEEEcCEEEECCCC
Confidence 0 00000000 0000 00011222222222 478888876543 23443 55777777 57999999999999
Q ss_pred CcHh
Q 022652 213 RSPI 216 (294)
Q Consensus 213 ~S~~ 216 (294)
.+..
T Consensus 145 ~~~~ 148 (464)
T 2a8x_A 145 STRL 148 (464)
T ss_dssp EECC
T ss_pred CCCC
Confidence 7754
No 143
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.98 E-value=2e-09 Score=98.78 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=71.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
.+.||+|||||++|+++|..|+++ |++|+|+|+.+....... ..... ..+...
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~-------~lp~~-~~g~~~----------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANC-------GLPYY-IGGVIT----------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHHHH-HTTSSC-----------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCC-------CCchh-hcCcCC-----------------
Confidence 467999999999999999999998 899999999986531110 00000 000000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-cCCC--EEEcCEEEecCC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDG 211 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G 211 (294)
......... .+.+.+.. +++++++++|+++..+++. +.+.. .+|+ ++.+|.||+|+|
T Consensus 90 --------------~~~~~~~~~----~~~~~~~~-gi~v~~~~~V~~id~~~~~-v~v~~~~~g~~~~~~~d~lviAtG 149 (588)
T 3ics_A 90 --------------ERQKLLVQT----VERMSKRF-NLDIRVLSEVVKINKEEKT-ITIKNVTTNETYNEAYDVLILSPG 149 (588)
T ss_dssp --------------CGGGGBSSC----HHHHHHHT-TCEEECSEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCC
T ss_pred --------------ChHHhhccC----HHHHHHhc-CcEEEECCEEEEEECCCCE-EEEeecCCCCEEEEeCCEEEECCC
Confidence 000000001 12222222 7889999999999877665 33443 3565 689999999999
Q ss_pred CCc
Q 022652 212 IRS 214 (294)
Q Consensus 212 ~~S 214 (294)
...
T Consensus 150 ~~p 152 (588)
T 3ics_A 150 AKP 152 (588)
T ss_dssp EEE
T ss_pred CCC
Confidence 743
No 144
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.97 E-value=2.6e-10 Score=100.68 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=67.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR--LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~--~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
++||+|||||++|+++|+.|++ .|++|+|+|+.+.... .+...... .+.. ....+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~-------~~~~~~~~--~g~~--------~~~~~~----- 59 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGF-------TPAFPHLA--MGWR--------KFEDIS----- 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEEC-------GGGHHHHH--HTCS--------CGGGSE-----
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCc-------CCCcchhc--cCcc--------CHHHHH-----
Confidence 3689999999999999999999 7899999999875421 11000000 0000 000000
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
....+ +.+. .+++++. .+|+.+..+.. .|.+.+++++.+|.||+|+|....
T Consensus 60 --------------------~~~~~----~~~~-~gv~~~~-~~v~~id~~~~---~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 60 --------------------VPLAP----LLPK-FNIEFIN-EKAESIDPDAN---TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp --------------------EESTT----TGGG-GTEEEEC-SCEEEEETTTT---EEEETTCCEEECSEEEECCCCEEE
T ss_pred --------------------HHHHH----HHHh-cCCEEEE-EEEEEEECCCC---EEEECCCcEEECCEEEEcCCcccc
Confidence 00000 0111 2677775 58888876544 277888888999999999998643
No 145
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.96 E-value=1.6e-09 Score=96.80 Aligned_cols=37 Identities=27% Similarity=0.614 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|..|+++|++|+|+|+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 4689999999999999999999999999999998765
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.96 E-value=1.2e-09 Score=97.43 Aligned_cols=36 Identities=33% Similarity=0.487 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
++||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 589999999999999999999999999999988765
No 147
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.96 E-value=2.9e-09 Score=93.88 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=66.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.+|||||||++|+++|..|++.+ ++|+|+|+.+... +.+....... |. .....+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~--g~--------~~~~~i~------ 59 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM--GW--------RKFEDIS------ 59 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH--TC--------SCGGGSE------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc--CC--------CCHHHhh------
Confidence 47999999999999999999876 7999999987421 1111111000 10 0000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
....+ +.+. .+++++.+ +|++|..+... |.+++|+++.+|++|+|+|+..
T Consensus 60 -------------------~~~~~----~~~~-~gv~~i~~-~v~~Id~~~~~---V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 60 -------------------VPLAP----LLPK-FNIEFINE-KAESIDPDANT---VTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp -------------------EESTT----TGGG-GTEEEECS-CEEEEETTTTE---EEETTCCEEECSEEEECCCCEE
T ss_pred -------------------hcHHH----HHHH-CCcEEEEe-EEEEEECCCCE---EEECCCCEEECCEEEEeCCCCc
Confidence 00000 1111 16677654 78888765543 7889999999999999999753
No 148
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.95 E-value=1.1e-09 Score=98.07 Aligned_cols=113 Identities=16% Similarity=0.231 Sum_probs=70.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
++||+|||||++|+++|..|++. |.+|+|+|+.+....... ....+- -+.. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~~-~~~~-------~~---------- 90 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-------GLPYVI-SGAI-------AS---------- 90 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-------GHHHHH-TTSS-------SC----------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-------Ccchhh-cCCc-------CC----------
Confidence 46999999999999999999997 999999999875421111 000000 0000 00
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-cCCC--EEEcCEEEecCCC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGI 212 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~ 212 (294)
........ .+.+.+. .+++++++++|+.+..+++. +.+.. .+|+ ++.+|.||+|+|.
T Consensus 91 --------------~~~l~~~~----~~~~~~~-~gv~~~~~~~v~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 91 --------------TEKLIARN----VKTFRDK-YGIDAKVRHEVTKVDTEKKI-VYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp --------------GGGGBSSC----HHHHHHT-TCCEEESSEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCE
T ss_pred --------------HHHhhhcC----HHHHHhh-cCCEEEeCCEEEEEECCCCE-EEEEEcCCCceEEEEcCEEEECCCC
Confidence 00000001 1222222 37899999999999876654 43554 4566 7999999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 151 ~p~ 153 (480)
T 3cgb_A 151 RPV 153 (480)
T ss_dssp EEC
T ss_pred ccc
Confidence 554
No 149
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.95 E-value=9.4e-10 Score=98.71 Aligned_cols=113 Identities=17% Similarity=0.143 Sum_probs=69.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC---CceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG---IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G---~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 133 (294)
+++||+|||||++|+++|..|++.| .+|+|+|+.+.....+.+ ... .++- ....
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-------~~~--~~~~------~~~~-------- 90 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-------MAL--WIGE------QIAG-------- 90 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-------HHH--HHTT------SSSC--------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-------cch--hhcC------ccCC--------
Confidence 3589999999999999999999998 999999998754221110 000 0000 0000
Q ss_pred CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec-CCCEEEcCEEEecCCC
Q 022652 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-NGTRIYANIVIGCDGI 212 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~-~g~~~~ad~vV~A~G~ 212 (294)
........+. .+ +. .+++++++++|+.+..+++. +.+... ++.++.+|.||+|+|.
T Consensus 91 ----------------~~~~~~~~~~----~~-~~-~gv~v~~~~~v~~i~~~~~~-v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 91 ----------------PEGLFYSDKE----EL-ES-LGAKVYMESPVQSIDYDAKT-VTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp ----------------SGGGBSCCHH----HH-HH-TTCEEETTCCEEEEETTTTE-EEEEETTEEEEEECSEEEECCCE
T ss_pred ----------------HHHhhhcCHH----HH-Hh-CCCEEEeCCEEEEEECCCCE-EEEEeCCcEEEEECCEEEECCCC
Confidence 0000000111 11 12 27899999999999866554 334321 2347999999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 148 ~p~ 150 (490)
T 2bc0_A 148 QPI 150 (490)
T ss_dssp EEC
T ss_pred CcC
Confidence 554
No 150
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.94 E-value=1.8e-09 Score=96.37 Aligned_cols=36 Identities=25% Similarity=0.579 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
++||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 579999999999999999999999999999998765
No 151
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.94 E-value=1.8e-09 Score=95.95 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999998
No 152
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.93 E-value=5.5e-09 Score=93.01 Aligned_cols=99 Identities=23% Similarity=0.232 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+... +..+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------~~~~------------------- 208 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------FDPL------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------cCHH-------------------
Confidence 458999999999999999999999999999998754110 0000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCC-EEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT-RIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ad~vV~A~G~~S~ 215 (294)
....+.+.|.+ .|++++++++|+++..++++ +.|.+.+|+ ++.+|.||.|+|....
T Consensus 209 -------------------~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 209 -------------------LSATLAENMHA--QGIETHLEFAVAALERDAQG-TTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp -------------------HHHHHHHHHHH--TTCEEESSCCEEEEEEETTE-EEEEETTCCEEEEESEEEECSCEEES
T ss_pred -------------------HHHHHHHHHHH--CCCEEEeCCEEEEEEEeCCe-EEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 01122333322 28999999999999877666 558888998 8999999999998764
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.93 E-value=4.3e-09 Score=96.13 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=69.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
.||+|||||++|+++|..|+++ |++|+|+|+.+....... ....+ ..+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-------~l~~~-~~~~~-------------------- 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-------GLPYH-ISGEI-------------------- 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-------GHHHH-HTSSS--------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-------CchHH-hcCCc--------------------
Confidence 5899999999999999999998 889999999986531110 00000 00000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-cCCC--EEEcCEEEecCCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGIR 213 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~~ 213 (294)
........-....+.+ .. +++++++++|+++..+... +.+.. .+|+ ++.+|.||+|+|..
T Consensus 54 -----------~~~~~~~~~~~~~~~~----~~-~i~~~~~~~V~~id~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 54 -----------AQRSALVLQTPESFKA----RF-NVEVRVKHEVVAIDRAAKL-VTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -----------CCGGGGBCCCHHHHHH----HH-CCEEETTEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----------CChHHhhccCHHHHHH----hc-CcEEEECCEEEEEECCCCE-EEEEecCCCCeEEEECCEEEECCCCC
Confidence 0000000011112222 11 7889999999999876655 33443 2343 78999999999984
Q ss_pred c
Q 022652 214 S 214 (294)
Q Consensus 214 S 214 (294)
.
T Consensus 117 p 117 (565)
T 3ntd_A 117 P 117 (565)
T ss_dssp E
T ss_pred C
Confidence 3
No 154
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.93 E-value=9.6e-10 Score=98.69 Aligned_cols=37 Identities=24% Similarity=0.531 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|..|+++|++|+|+|+.+.+
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4689999999999999999999999999999998765
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.92 E-value=5.6e-09 Score=93.03 Aligned_cols=100 Identities=19% Similarity=0.301 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+...- ..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~-------------------- 210 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQG------------------DP-------------------- 210 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CH--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccccc------------------CH--------------------
Confidence 4689999999999999999999999999999987552100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec-C--CC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-N--GT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~-~--g~--~~~ad~vV~A~G~ 212 (294)
--...+.+.|.+ .|++++++++|+++..++++ +.+.+. + |+ ++.+|.||.|+|.
T Consensus 211 ------------------~~~~~l~~~l~~--~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 211 ------------------ETAALLRRALEK--EGIRVRTKTKAVGYEKKKDG-LHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEECSEEEEEEEEETTE-EEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred ------------------HHHHHHHHHHHh--cCCEEEcCCEEEEEEEeCCE-EEEEEeecCCCceeEEEcCEEEECCCc
Confidence 001122233322 38999999999999877665 446765 6 76 7999999999998
Q ss_pred CcHh
Q 022652 213 RSPI 216 (294)
Q Consensus 213 ~S~~ 216 (294)
.+..
T Consensus 270 ~p~~ 273 (464)
T 2eq6_A 270 KPRT 273 (464)
T ss_dssp EESC
T ss_pred ccCC
Confidence 7653
No 156
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.91 E-value=5.3e-09 Score=90.28 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=66.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
.-||+|||||++|+++|..|++.| +|+|+|+.+..... . +.....+. +.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~-~-----~~l~~~~~--g~---------------------- 56 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYS-K-----PMLSHYIA--GF---------------------- 56 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCC-S-----TTHHHHHT--TS----------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccc-c-----chhHHHHh--CC----------------------
Confidence 458999999999999999999999 99999998754210 0 00000000 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.+. . ... ....+ .+.+ .+++++.+++|+.+..+.. .|. .+++++.+|.+|+|+|...
T Consensus 57 ----~~~-----~-~~~-~~~~~---~~~~--~~v~~~~g~~v~~id~~~~---~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 ----IPR-----N-RLF-PYSLD---WYRK--RGIEIRLAEEAKLIDRGRK---VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp ----SCG-----G-GGC-SSCHH---HHHH--HTEEEECSCCEEEEETTTT---EEE-ESSCEEECSEEEECCCEEE
T ss_pred ----CCH-----H-Hhc-cCCHH---HHHh--CCcEEEECCEEEEEECCCC---EEE-ECCcEEECCEEEECCCCCC
Confidence 000 0 000 00011 1111 2789999999998875532 255 6777899999999999643
No 157
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.91 E-value=8.2e-09 Score=90.47 Aligned_cols=101 Identities=20% Similarity=0.322 Sum_probs=75.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+|+|||+|..|+.+|..|++.|.+|+++|+.+.+.... +
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------~----------------- 183 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV---------------------L----------------- 183 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH---------------------H-----------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh---------------------c-----------------
Confidence 35689999999999999999999999999999988652100 0
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
+. --...+.+.+.+ .|++++++++|+++..++ .+..|.+.+|+++.+|.||.|+|....
T Consensus 184 -------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~-~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 184 -------------GR----RIGAWLRGLLTE--LGVQVELGTGVVGFSGEG-QLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp -------------CH----HHHHHHHHHHHH--HTCEEECSCCEEEEECSS-SCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred -------------CH----HHHHHHHHHHHH--CCCEEEeCCEEEEEeccC-cEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 00 001122222222 289999999999998755 445689999999999999999998654
No 158
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.91 E-value=9e-09 Score=92.56 Aligned_cols=101 Identities=18% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.+. +..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~-------------------- 217 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------FDE-------------------- 217 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------SCH--------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------cch--------------------
Confidence 468999999999999999999999999999998765210 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCE-EEcCEEEecCCCCcHh
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTR-IYANIVIGCDGIRSPI 216 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~-~~ad~vV~A~G~~S~~ 216 (294)
-....+.+.|.+ .|++++++++|+++..++++.+.|.+.+|++ +.+|.||.|+|.....
T Consensus 218 ------------------~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 ------------------SVINVLENDMKK--NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred ------------------hhHHHHHHHHHh--CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 001122333333 3899999999999987655435588888887 9999999999987653
No 159
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.91 E-value=4.5e-09 Score=94.91 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 457999999999999999999999999999999964
No 160
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.90 E-value=1.9e-09 Score=96.72 Aligned_cols=110 Identities=20% Similarity=0.267 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
.+||+|||||++|+++|+.|+++ ++|+|+|+.+.++ |... . .... .
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G--G~~~----------------~----~~~~-----~------ 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG--GDMW----------------L----KGIK-----Q------ 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS--CSGG----------------G----TCSE-----E------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC--Ceee----------------c----cccc-----c------
Confidence 57999999999999999999999 9999999998652 2100 0 0000 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC-CCCceEeCCceeEEEEcCCceEEEEecCCC--EEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL-PPESVQFSSELAKIETSGNGVTILELVNGT--RIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~--~~~ad~vV~A~G~~S 214 (294)
+ .... ...++.+.+.+.+ .+++++++++|.++..++.........+++ .+.+|.+|+|+|...
T Consensus 154 ----~-------g~~~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 154 ----E-------GFNK---DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ----T-------TTTE---EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred ----C-------CCCC---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 0 0000 3445555655554 477888999999988776653322224453 689999999999754
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 220 ~ 220 (493)
T 1y56_A 220 S 220 (493)
T ss_dssp C
T ss_pred c
Confidence 3
No 161
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.90 E-value=8.9e-09 Score=92.52 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=42.4
Q ss_pred eeHHHHHHHHHhcCC--CCceEeCCceeEEEEcCC-------ceEEEEecCC-----CEEEcCEEEecCCCC
Q 022652 156 VERRILLETLANQLP--PESVQFSSELAKIETSGN-------GVTILELVNG-----TRIYANIVIGCDGIR 213 (294)
Q Consensus 156 ~~~~~l~~~L~~~~~--~v~i~~~~~v~~i~~~~~-------~~~~v~~~~g-----~~~~ad~vV~A~G~~ 213 (294)
..|.++.++|...+. +..++++++|++++..++ +.|.|++.++ +++.|+.||+|+|..
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 567777777655442 457999999999987543 2477877654 268999999999954
No 162
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.90 E-value=1.1e-08 Score=91.77 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~---G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
..+++|||||..|+.+|..|++. |.+|+|+|+.+.+... +..
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------~d~----------------- 235 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------FDE----------------- 235 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------SCH-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------cCH-----------------
Confidence 46899999999999999999999 9999999998765210 000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
-....+.+.|.+ .|++++++++|+++..++++.+.|.+.+|+++.+|.||.|+|...
T Consensus 236 ---------------------~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 ---------------------TIREEVTKQLTA--NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp ---------------------HHHHHHHHHHHH--TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred ---------------------HHHHHHHHHHHh--CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcc
Confidence 001122333322 389999999999998776554568888998899999999999865
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 293 ~ 293 (495)
T 2wpf_A 293 R 293 (495)
T ss_dssp C
T ss_pred c
Confidence 4
No 163
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.89 E-value=2.4e-09 Score=96.05 Aligned_cols=132 Identities=18% Similarity=0.237 Sum_probs=73.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
..+||+|||||++|+++|..|+++ |.+|+|+|+.+....... +-+..++. +..... .....+...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~-----~lsk~l~~--~~~~~~------~~~~~~~~~ 76 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRP-----PLSKELWF--SDDPNV------TKTLRFKQW 76 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSG-----GGGTGGGC--C--CTH------HHHCEEECT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCC-----CCCHHhhc--CCccch------hhccccccc
Confidence 468999999999999999999887 889999999875421100 00000000 000000 001111111
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhc-CCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQ-LPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
.+.. ..+.+... .. ......+ .+. ..+++++.+++|+++..+.. .|.+.+|+++.+|.||+|+|..
T Consensus 77 ~~~~-~~~~~~~~----~~-~~~~~~l----~~~~~~gv~~~~g~~v~~id~~~~---~V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 77 NGKE-RSIYFQPP----SF-YVSAQDL----PHIENGGVAVLTGKKVVQLDVRDN---MVKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TSCE-EESBSSCG----GG-SBCTTTT----TTSTTCEEEEEETCCEEEEEGGGT---EEEETTSCEEEEEEEEECCCEE
T ss_pred cccc-ccccccch----Hh-hcchhhh----hhhhcCCeEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCC
Confidence 1110 00111000 00 0111111 111 13788999999999986543 2778888889999999999975
Q ss_pred c
Q 022652 214 S 214 (294)
Q Consensus 214 S 214 (294)
.
T Consensus 144 p 144 (493)
T 1m6i_A 144 P 144 (493)
T ss_dssp E
T ss_pred C
Confidence 4
No 164
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.89 E-value=3.7e-08 Score=87.86 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=45.3
Q ss_pred HHHHHHHhcCC----------CCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 160 ILLETLANQLP----------PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 160 ~l~~~L~~~~~----------~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.+.+.|.+.+. +++|+++++|++|..++++ +.|++.+|++++||.||.|++.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-VTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-EEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-EEEEECCCCEEEcCEEEEecCHHHh
Confidence 66777777652 4689999999999988877 4589999988999999999997544
No 165
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.1e-08 Score=91.52 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++|+.+.+... +..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~d~-------------------- 226 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------FDE-------------------- 226 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------cCH--------------------
Confidence 468999999999999999999999999999998764210 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCc-eEEEEecCC-CEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNG-VTILELVNG-TRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~-~~~v~~~~g-~~~~ad~vV~A~G~~S~ 215 (294)
-....+.+.|.+. |++++++++|+++..++++ .+.|.+.+| +++.+|.||.|+|....
T Consensus 227 ------------------~~~~~l~~~l~~~--Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 227 ------------------CIQNTITDHYVKE--GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp ------------------HHHHHHHHHHHHH--TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred ------------------HHHHHHHHHHHhC--CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 0011233333332 8999999999999876554 355888888 78999999999997654
No 166
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.89 E-value=5.7e-10 Score=99.13 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=68.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHc-CCchhHHhccccccceEEEcCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDAL-GVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~l-g~~~~~~~~~~~~~~~~~~~~~ 135 (294)
+||+|||||++|+++|..|++. |++|+|+|+.+.....+. ... ..+ +....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~--~~~~g~~~~----------------- 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-------GIA--LYLGKEIKN----------------- 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-------GHH--HHHTTCBGG-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-------cch--hhhcCCccc-----------------
Confidence 5899999999999999999998 999999999875421111 000 000 00000
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec-C--CCEEEcCEEEecCCC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-N--GTRIYANIVIGCDGI 212 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~-~--g~~~~ad~vV~A~G~ 212 (294)
.+ ........ .+.+. . .+++++++++|+.+..+++. +.+... + ++++.+|.+|+|+|.
T Consensus 55 ------~~------~~~~~~~~----~~~~~-~-~gv~~~~~~~v~~i~~~~~~-v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 55 ------ND------PRGLFYSS----PEELS-N-LGANVQMRHQVTNVDPETKT-IKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp ------GC------GGGGBSCC----HHHHH-H-TTCEEEESEEEEEEEGGGTE-EEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------CC------HHHhhhcC----HHHHH-H-cCCEEEeCCEEEEEEcCCCE-EEEEecCCCceEEEECCEEEEccCC
Confidence 00 00000001 11121 2 27899999999999766554 334431 2 357999999999996
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 116 ~p~ 118 (452)
T 2cdu_A 116 KPT 118 (452)
T ss_dssp EEC
T ss_pred CcC
Confidence 544
No 167
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.89 E-value=8.9e-09 Score=92.32 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~---G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
..+++|||||..|+.+|..|++. |.+|+++|+.+.+.+.-
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~------------------------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGF------------------------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTS-------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccccc-------------------------------------
Confidence 46899999999999999999999 99999999988542100
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.. -....+.+.|.+ .|++++++++|+++..++++.+.|.+.+|+++.+|.||.|+|...
T Consensus 230 ---------------d~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 ---------------DS----ELRKQLTEQLRA--NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp ---------------CH----HHHHHHHHHHHH--TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred ---------------CH----HHHHHHHHHHHh--CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 00 001122233322 389999999999998876554568888888899999999999876
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 289 ~ 289 (490)
T 1fec_A 289 R 289 (490)
T ss_dssp S
T ss_pred C
Confidence 4
No 168
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.88 E-value=1.6e-08 Score=90.10 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899999999999999999999999999999983
No 169
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.88 E-value=1.4e-08 Score=89.47 Aligned_cols=100 Identities=18% Similarity=0.261 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~--------------------------------------- 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVT--------------------------------------- 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchh---------------------------------------
Confidence 46899999999999999999999999999999875421000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEE--cCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIET--SGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+. --...+.+.+.+ .|++++++++|+++.. +++++..|.+.+|+++.+|.||.|+|...
T Consensus 190 ------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 190 ------------AP----PVSAFYEHLHRE--AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp ------------CH----HHHHHHHHHHHH--HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred ------------hH----HHHHHHHHHHHh--CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 00 000112222222 2899999999999987 44555568888998999999999999754
No 170
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.86 E-value=1.2e-08 Score=90.48 Aligned_cols=111 Identities=16% Similarity=0.153 Sum_probs=68.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
+||+|||||++|+++|..|++. |.+|+|+|+.+.....+. ..... .-+.. ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~~~~-~~~~~-------~~----------- 54 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-------GMQLY-LEGKV-------KD----------- 54 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-------GHHHH-HTTSS-------CC-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-------cchhh-hcCcc-------CC-----------
Confidence 4899999999999999999998 999999999875421111 00000 00000 00
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-cCCC--EEEcCEEEecCCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-VNGT--RIYANIVIGCDGIR 213 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-~~g~--~~~ad~vV~A~G~~ 213 (294)
........ .+.+.+ . +++++.+++|+.+..+++. +.+.. .+|+ ++.+|.+|+|+|..
T Consensus 55 -------------~~~~~~~~----~~~~~~-~-gv~~~~~~~v~~i~~~~~~-v~~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 55 -------------VNSVRYMT----GEKMES-R-GVNVFSNTEITAIQPKEHQ-VTVKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp -------------GGGSBSCC----HHHHHH-T-TCEEEETEEEEEEETTTTE-EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -------------HHHhhcCC----HHHHHH-C-CCEEEECCEEEEEeCCCCE-EEEEecCCCceEEEeCCEEEEcCCCC
Confidence 00000001 112222 2 7899999999999766654 33443 3455 48999999999975
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
..
T Consensus 115 p~ 116 (447)
T 1nhp_A 115 PF 116 (447)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 171
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.86 E-value=8.7e-10 Score=98.01 Aligned_cols=36 Identities=31% Similarity=0.569 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
++||+|||||++|+++|..|++.|++|+|+|+.+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 379999999999999999999999999999998755
No 172
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.85 E-value=1.3e-08 Score=90.14 Aligned_cols=98 Identities=16% Similarity=0.276 Sum_probs=71.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+++|||||++|+.+|..|++.|.+|+|+|+.+.+....
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY--------------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------------------------------------
Confidence 45799999999999999999999999999999987542100
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcC--CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQL--PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
. ..++.+.+.+.+ .|++++++++|+++..+ ++++.+.+ ++.++.+|.||.|+|...
T Consensus 189 -------------------~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 189 -------------------L-DKEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp -------------------C-CHHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred -------------------C-CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 0 011222222222 38999999999999865 44334566 456799999999999765
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 247 ~ 247 (447)
T 1nhp_A 247 N 247 (447)
T ss_dssp S
T ss_pred C
Confidence 3
No 173
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.85 E-value=2.4e-09 Score=95.69 Aligned_cols=37 Identities=30% Similarity=0.574 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4789999999999999999999999999999998744
No 174
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.84 E-value=1e-08 Score=91.89 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 5799999999999999999999999999999984
No 175
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.84 E-value=1.3e-08 Score=88.46 Aligned_cols=110 Identities=18% Similarity=0.221 Sum_probs=66.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSE 134 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 134 (294)
.++||+|||||++|+++|..|+++| .+|+|+|+..... ..... + . ...
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~-------~~~~~---l------~----~~~---------- 52 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRS-------YSKPM---L------S----TGF---------- 52 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCE-------ECGGG---G------G----GTT----------
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCc-------cCccc---c------c----HHH----------
Confidence 3589999999999999999999999 4689999875210 00000 0 0 000
Q ss_pred CCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 135 DGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
............. .+.+.+.. +++++.+++|+.+..++.. |.+.++ ++.+|.+|+|+|...
T Consensus 53 ----------~~~~~~~~~~~~~----~~~~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~~-~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 53 ----------SKNKDADGLAMAE----PGAMAEQL-NARILTHTRVTGIDPGHQR---IWIGEE-EVRYRDLVLAWGAEP 113 (384)
T ss_dssp ----------TTTCCHHHHEEEC----HHHHHHHT-TCEEECSCCCCEEEGGGTE---EEETTE-EEECSEEEECCCEEE
T ss_pred ----------hCCCCHHHhhccC----HHHHHHhC-CcEEEeCCEEEEEECCCCE---EEECCc-EEECCEEEEeCCCCc
Confidence 0000000000001 11222222 7889999999998765433 555544 699999999999755
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 114 ~ 114 (384)
T 2v3a_A 114 I 114 (384)
T ss_dssp C
T ss_pred C
Confidence 4
No 176
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.83 E-value=6.7e-09 Score=93.36 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc---CCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL---GIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~---G~~V~vlE~~~ 91 (294)
++||+|||||++|+++|+.|+++ |++|+|+|+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999987
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.83 E-value=1.5e-08 Score=89.99 Aligned_cols=99 Identities=18% Similarity=0.269 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+... ...
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~-------------------- 211 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------FEK-------------------- 211 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------SCH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------cCH--------------------
Confidence 468999999999999999999999999999998755210 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~~~~ad~vV~A~G~~S 214 (294)
-....+.+.|.+ .|++++++++|+++..++++ +.+.+. +++++.+|.||.|+|...
T Consensus 212 ------------------~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 212 ------------------QMAAIIKKRLKK--KGVEVVTNALAKGAEEREDG-VTVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEEESEEEEEEEEETTE-EEEEEEETTEEEEEEESEEEECSCEEE
T ss_pred ------------------HHHHHHHHHHHH--CCCEEEeCCEEEEEEEeCCe-EEEEEEeCCceeEEEcCEEEECcCCCc
Confidence 001122233322 38999999999999877665 445554 446799999999999865
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 271 ~ 271 (455)
T 1ebd_A 271 N 271 (455)
T ss_dssp S
T ss_pred c
Confidence 4
No 178
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.82 E-value=2.8e-08 Score=87.03 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~--------------------------------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAA--------------------------------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccccc---------------------------------------
Confidence 56899999999999999999999999999999886521000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+. -....+.+.|.+ .|++++++++|+++. + + .|.+.+|+++.+|.||.|+|...
T Consensus 186 ------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~-~-~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 186 ------------PA----TLADFVARYHAA--QGVDLRFERSVTGSV-D-G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEEESCCEEEEE-T-T---EEEETTSCEEECSEEEECSCEEE
T ss_pred ------------CH----HHHHHHHHHHHH--cCcEEEeCCEEEEEE-C-C---EEEECCCCEEEcCEEEECcCCCc
Confidence 00 001122222322 389999999999998 3 3 37788898999999999999764
No 179
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.82 E-value=1.3e-08 Score=91.21 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4689999999999999999999999999999994
No 180
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.82 E-value=2.5e-08 Score=89.62 Aligned_cols=100 Identities=16% Similarity=0.282 Sum_probs=75.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++|+.+.+...-
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYE---------------------------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCCS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc----------------------------------------
Confidence 4689999999999999999999999999999987552100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
.. -....+.+.|.+ .|++++++++|+++..++++ +.+.+.+|+++.+|.||+|+|..+..
T Consensus 222 ------------d~----~~~~~l~~~l~~--~GV~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 222 ------------DA----DAALVLEESFAE--RGVRLFKNARAASVTRTGAG-VLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ------------SH----HHHHHHHHHHHH--TTCEEETTCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCEEECC
T ss_pred ------------CH----HHHHHHHHHHHH--CCCEEEeCCEEEEEEEeCCE-EEEEECCCcEEEcCEEEECCCCCcCC
Confidence 00 001122222222 38999999999999987666 45778888889999999999987653
No 181
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.82 E-value=2e-08 Score=90.71 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCcE
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 138 (294)
.+++|||||..|+.+|..|++.|.+|+++|+.+.+...-
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~----------------------------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIK----------------------------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTCC-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccccc-----------------------------------------
Confidence 689999999999999999999999999999988542100
Q ss_pred EEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCce---EEEEecCCC-EEEcCEEEecCCCCc
Q 022652 139 LRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGV---TILELVNGT-RIYANIVIGCDGIRS 214 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~---~~v~~~~g~-~~~ad~vV~A~G~~S 214 (294)
.. -....+.+.|.+ .|++++++++|+++..++++. +.|.+.+|+ ++.+|.||.|+|..+
T Consensus 254 -----------~~----~~~~~l~~~l~~--~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 254 -----------DN----ETRAYVLDRMKE--QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp -----------SH----HHHHHHHHHHHH--TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred -----------cH----HHHHHHHHHHHh--CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 00 001122233322 389999999999998765552 457888887 799999999999876
Q ss_pred Hh
Q 022652 215 PI 216 (294)
Q Consensus 215 ~~ 216 (294)
..
T Consensus 317 ~~ 318 (523)
T 1mo9_A 317 RS 318 (523)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 182
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.82 E-value=2.1e-08 Score=87.56 Aligned_cols=105 Identities=17% Similarity=0.153 Sum_probs=66.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
++|||||||++|+++|..|++.| .+|+|||+.+..... +. +..+.........
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-------p~----------~~~v~~g~~~~~~-------- 57 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-------YM----------SNEVIGGDRELAS-------- 57 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-------TT----------HHHHHHTSSCGGG--------
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-------cC----------HHHHhcCCCCHHH--------
Confidence 47999999999999999999876 589999998742110 10 0111000000000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.......+. + .+++++. .+|++|..+... |.+.+|.++.+|.+|+|+|....
T Consensus 58 -----------------~~~~~~~~~----~--~gv~~i~-~~v~~id~~~~~---v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 58 -----------------LRVGYDGLR----A--HGIQVVH-DSALGIDPDKKL---VKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp -----------------GEECSHHHH----H--TTCEEEC-SCEEEEETTTTE---EEETTSCEEECSEEEECCCEEEC
T ss_pred -----------------HhhCHHHHH----H--CCCEEEE-eEEEEEEccCcE---EEecccceeecceeeeccCCccc
Confidence 001111221 1 2777764 478888765543 78889999999999999997543
No 183
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.81 E-value=1.6e-08 Score=90.51 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=73.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+|+|+.+.+...- ..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~~------------------~~-------------------- 226 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQGA------------------DR-------------------- 226 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccc------------------CH--------------------
Confidence 4689999999999999999999999999999988652100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC----CCEEEcCEEEecCCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN----GTRIYANIVIGCDGIR 213 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~----g~~~~ad~vV~A~G~~ 213 (294)
-....+.+.|.+ .|++++++++|+++..++++ +.|.+.+ |+++.+|.||.|+|..
T Consensus 227 ------------------~~~~~l~~~l~~--~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 227 ------------------DLVKVWQKQNEY--RFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp ------------------HHHHHHHHHHGG--GEEEEECSCEEEEEEEETTE-EEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred ------------------HHHHHHHHHHHh--cCCEEEECCEEEEEEEcCCe-EEEEEeccCCCceEEEcCEEEECcCCC
Confidence 001122333322 28899999999999877655 4477766 6779999999999987
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
..
T Consensus 286 p~ 287 (482)
T 1ojt_A 286 PN 287 (482)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 184
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.81 E-value=2.2e-08 Score=85.50 Aligned_cols=34 Identities=38% Similarity=0.570 Sum_probs=32.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+||+|||||++|+.+|+.|+++|++|+|+|+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 6999999999999999999999999999999773
No 185
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.80 E-value=3.4e-08 Score=88.46 Aligned_cols=99 Identities=22% Similarity=0.339 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||+|..|+.+|..|++.|.+|+++++.+.+...- ..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~------------------~~-------------------- 232 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNF------------------DY-------------------- 232 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CH--------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccccc------------------CH--------------------
Confidence 4689999999999999999999999999999987542100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
-....+.+.|.+. |++++++++|++++.++++ +.|.+.+|+++.+|.||.|+|..+.
T Consensus 233 ------------------~~~~~l~~~l~~~--Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 233 ------------------DLRQLLNDAMVAK--GISIIYEATVSQVQSTENC-YNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp ------------------HHHHHHHHHHHHH--TCEEESSCCEEEEEECSSS-EEEEETTSCEEEESEEEECCCEEEC
T ss_pred ------------------HHHHHHHHHHHHC--CCEEEeCCEEEEEEeeCCE-EEEEECCCcEEEcCEEEEeeCCCcC
Confidence 0011223333332 8999999999999987776 4688999988999999999998654
No 186
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.80 E-value=1.8e-08 Score=90.27 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5799999999999999999999999999999963
No 187
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.79 E-value=3.7e-08 Score=89.04 Aligned_cols=38 Identities=26% Similarity=0.426 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..++||+|||||++|+++|+.|++.|++|+|+|+.+.+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 35689999999999999999999999999999998755
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=2.1e-08 Score=89.20 Aligned_cols=34 Identities=26% Similarity=0.567 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4689999999999999999999999999999993
No 189
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.79 E-value=2.4e-08 Score=89.30 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+...-
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 222 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASM---------------------------------------- 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSS----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccccc----------------------------------------
Confidence 4689999999999999999999999999999988652100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEE--cCCceEEEEec-----CCCEEEcCEEEecC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIET--SGNGVTILELV-----NGTRIYANIVIGCD 210 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~--~~~~~~~v~~~-----~g~~~~ad~vV~A~ 210 (294)
.. -....+.+.|.+ .|++++++++|+++.. +++. +.+.+. +++++.+|.||.|+
T Consensus 223 ------------~~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~ 283 (478)
T 1v59_A 223 ------------DG----EVAKATQKFLKK--QGLDFKLSTKVISAKRNDDKNV-VEIVVEDTKTNKQENLEAEVLLVAV 283 (478)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECS
T ss_pred ------------CH----HHHHHHHHHHHH--CCCEEEeCCEEEEEEEecCCCe-EEEEEEEcCCCCceEEECCEEEECC
Confidence 00 001122233322 3899999999999987 4433 446665 34679999999999
Q ss_pred CCCcHh
Q 022652 211 GIRSPI 216 (294)
Q Consensus 211 G~~S~~ 216 (294)
|.....
T Consensus 284 G~~p~~ 289 (478)
T 1v59_A 284 GRRPYI 289 (478)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 976543
No 190
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.78 E-value=3.3e-08 Score=88.24 Aligned_cols=101 Identities=18% Similarity=0.312 Sum_probs=72.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.... +..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~-----------------~~~~------------------- 221 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG-----------------IDME------------------- 221 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS-----------------CCHH-------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc-----------------cCHH-------------------
Confidence 4689999999999999999999999999999988652100 0000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe-----cCCCEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL-----VNGTRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~-----~~g~~~~ad~vV~A~G~ 212 (294)
....+.+.|.+ .|++++++++|+++..++++.+.+.+ .+++++.+|.||.|+|.
T Consensus 222 -------------------~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 222 -------------------ISKNFQRILQK--QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp -------------------HHHHHHHHHHH--TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred -------------------HHHHHHHHHHH--CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 01122233322 38999999999999887665233553 45568999999999998
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 281 ~p~ 283 (474)
T 1zmd_A 281 RPF 283 (474)
T ss_dssp EEC
T ss_pred CcC
Confidence 654
No 191
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.78 E-value=4.4e-08 Score=86.91 Aligned_cols=100 Identities=20% Similarity=0.272 Sum_probs=72.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~--------------------------------------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYF--------------------------------------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTS---------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhh---------------------------------------
Confidence 46899999999999999999999999999999875521000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.. -....+.+.|.+ .|++++++++|+++..+++++..+.+ +|+++.+|.||.|+|....
T Consensus 190 ------------~~----~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 190 ------------DK----EFTDILAKDYEA--HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred ------------hh----hHHHHHHHHHHH--CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 00 001122222322 38999999999999865555433554 6778999999999997653
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.78 E-value=4.1e-08 Score=87.40 Aligned_cols=99 Identities=16% Similarity=0.297 Sum_probs=72.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+.+. ...+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------- 213 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------EDAD------------------- 213 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------SCHH-------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------cCHH-------------------
Confidence 468999999999999999999999999999998765210 0000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec-CC--CEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV-NG--TRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~-~g--~~~~ad~vV~A~G~~S 214 (294)
....+.+.|.+. |++++++++|+++..++++ +.+.+. +| +++.+|.||.|+|...
T Consensus 214 -------------------~~~~l~~~l~~~--gv~i~~~~~v~~i~~~~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 214 -------------------VSKEIEKQFKKL--GVTILTATKVESIADGGSQ-VTVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp -------------------HHHHHHHHHHHH--TCEEECSCEEEEEEECSSC-EEEEEESSSCEEEEEESEEEECSCEEE
T ss_pred -------------------HHHHHHHHHHHc--CCEEEeCcEEEEEEEcCCe-EEEEEEcCCceEEEEcCEEEECCCCCc
Confidence 011222333222 8999999999999877655 446664 56 5799999999999765
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 272 ~ 272 (464)
T 2a8x_A 272 N 272 (464)
T ss_dssp C
T ss_pred c
Confidence 4
No 193
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.77 E-value=2.1e-08 Score=88.62 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=66.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCCCCcCceEEEcccHHHHHHHcC-CchhHHhccccccceEEEcCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSLRTGGTSLTLFKNGWSVLDALG-VGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg-~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
+|+|||||++|+++|..|++.| .+|+|+|+.+.......+ +.. .++ ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~-------l~~--~~~~~~~~------------------ 54 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCA-------LPY--VIGEVVED------------------ 54 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGG-------HHH--HHTTSSCC------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcch-------hHH--HHcCCccc------------------
Confidence 6999999999999999999998 479999998754211110 000 000 0000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---CCEEEcCEEEecCCCC
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GTRIYANIVIGCDGIR 213 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g~~~~ad~vV~A~G~~ 213 (294)
...........+.+. .+++++.+++|+++..+... +.+.... +.++.+|.+|+|+|..
T Consensus 55 -------------~~~~~~~~~~~~~~~-----~~i~~~~~~~V~~id~~~~~-~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 55 -------------RRYALAYTPEKFYDR-----KQITVKTYHEVIAINDERQT-VSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp -------------GGGTBCCCHHHHHHH-----HCCEEEETEEEEEEETTTTE-EEEEETTTTEEEEEECSEEEECCCEE
T ss_pred -------------hhhhhhcCHHHHHHh-----cCCEEEeCCeEEEEEccCcE-EEEEeccCCceEEEEcCEEEECCCCc
Confidence 000001122233222 17899999999999766554 3233322 2368899999999975
Q ss_pred c
Q 022652 214 S 214 (294)
Q Consensus 214 S 214 (294)
.
T Consensus 116 p 116 (437)
T 4eqs_A 116 A 116 (437)
T ss_dssp E
T ss_pred c
Confidence 4
No 194
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.77 E-value=6.3e-08 Score=88.37 Aligned_cols=100 Identities=24% Similarity=0.359 Sum_probs=73.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+...-
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 190 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPV---------------------------------------- 190 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTS----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhc----------------------------------------
Confidence 4589999999999999999999999999999988542100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEc------------------CCceEEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETS------------------GNGVTILELVNGT 199 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~------------------~~~~~~v~~~~g~ 199 (294)
.. -....+.+.|.+ .|++++++++|+++..+ +++.+.+.+.+|+
T Consensus 191 ------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ 252 (565)
T 3ntd_A 191 ------------DR----EMAGFAHQAIRD--QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGE 252 (565)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSC
T ss_pred ------------CH----HHHHHHHHHHHH--CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCC
Confidence 00 001122223322 38999999999999873 2333557788888
Q ss_pred EEEcCEEEecCCCCcH
Q 022652 200 RIYANIVIGCDGIRSP 215 (294)
Q Consensus 200 ~~~ad~vV~A~G~~S~ 215 (294)
++.+|.||.|+|....
T Consensus 253 ~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 253 LLETDLLIMAIGVRPE 268 (565)
T ss_dssp EEEESEEEECSCEEEC
T ss_pred EEEcCEEEECcCCccc
Confidence 9999999999998653
No 195
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.76 E-value=6.2e-08 Score=86.44 Aligned_cols=107 Identities=28% Similarity=0.400 Sum_probs=77.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+++|||+|..|+.+|..|++. |.+|+++|+.+.+.....
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~-------------------------------------- 200 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFT-------------------------------------- 200 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTS--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccccc--------------------------------------
Confidence 46899999999999999999999 999999999875421000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH-
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP- 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~- 215 (294)
.. -....+.+.|.+ .|++++++++|+++..++++ +.+.+.+|+++.+|.||.|+|....
T Consensus 201 -------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 201 -------------SK----SLSQMLRHDLEK--NDVVVHTGEKVVRLEGENGK-VARVITDKRTLDADLVILAAGVSPNT 260 (472)
T ss_dssp -------------CH----HHHHHHHHHHHH--TTCEEECSCCEEEEEESSSB-EEEEEESSCEEECSEEEECSCEEECC
T ss_pred -------------CH----HHHHHHHHHHHh--cCCEEEeCCEEEEEEccCCe-EEEEEeCCCEEEcCEEEECCCCCcCH
Confidence 00 001122222222 38999999999999876655 4478888889999999999998643
Q ss_pred -hhhhcCC
Q 022652 216 -IAKWIGF 222 (294)
Q Consensus 216 -~~~~~~~ 222 (294)
+.+.+|+
T Consensus 261 ~l~~~~gl 268 (472)
T 3iwa_A 261 QLARDAGL 268 (472)
T ss_dssp HHHHHHTC
T ss_pred HHHHhCCc
Confidence 4344444
No 196
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.76 E-value=4.1e-08 Score=82.81 Aligned_cols=98 Identities=15% Similarity=0.244 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------~-------------------- 184 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAE--------------------K-------------------- 184 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCC--------------------H--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccC--------------------H--------------------
Confidence 468999999999999999999999999999988754100 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC----C--CEEEcCEEEecCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN----G--TRIYANIVIGCDG 211 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~----g--~~~~ad~vV~A~G 211 (294)
.....+.+.|.+ .+++++++++|+++..+++++..|.+.+ | +++.+|.||.|+|
T Consensus 185 ------------------~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G 244 (320)
T 1trb_A 185 ------------------ILIKRLMDKVEN--GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG 244 (320)
T ss_dssp ------------------HHHHHHHHHHHT--SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSC
T ss_pred ------------------HHHHHHHHhccc--CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeC
Confidence 001122222222 3889999999999987765654566654 4 4799999999999
Q ss_pred CCcH
Q 022652 212 IRSP 215 (294)
Q Consensus 212 ~~S~ 215 (294)
....
T Consensus 245 ~~p~ 248 (320)
T 1trb_A 245 HSPN 248 (320)
T ss_dssp EEES
T ss_pred CCCC
Confidence 7543
No 197
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.76 E-value=4.1e-08 Score=87.55 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=72.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++|+.+.+.+.-
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTL---------------------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccccC----------------------------------------
Confidence 4689999999999999999999999999999987652100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHH-HhcCCCCceEeCCceeEEEEcCCceEEEEec--CC--CEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETL-ANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G~ 212 (294)
.. -....+.+.| .+ .|++++++++|++++.++++ +.+.+. +| +++.+|.||.|+|.
T Consensus 214 ------------d~----~~~~~l~~~l~~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 214 ------------DE----DVTNALVGALAKN--EKMKFMTSTKVVGGTNNGDS-VSLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp ------------CH----HHHHHHHHHHHHH--TCCEEECSCEEEEEEECSSS-EEEEEECC---EEEEEESEEEECSCE
T ss_pred ------------CH----HHHHHHHHHHhhc--CCcEEEeCCEEEEEEEcCCe-EEEEEEcCCCceEEEECCEEEECCCc
Confidence 00 0012233333 22 28999999999999887665 446665 56 57999999999998
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
.+.
T Consensus 275 ~p~ 277 (468)
T 2qae_A 275 RPF 277 (468)
T ss_dssp EEC
T ss_pred ccC
Confidence 764
No 198
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.76 E-value=4.1e-08 Score=87.39 Aligned_cols=99 Identities=18% Similarity=0.242 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||+|..|+.+|..|++.|.+|+++++.+.+.... ..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~~------------------~~-------------------- 211 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSRF------------------DQ-------------------- 211 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTS------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccccc------------------CH--------------------
Confidence 5689999999999999999999999999999987542100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEE-ecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILE-LVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~-~~~g~~~~ad~vV~A~G~~S~ 215 (294)
-....+.+.|.+ .|++++++++|+++..++++.+.|. +.+|+ +.+|.||.|+|....
T Consensus 212 ------------------~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 212 ------------------DMRRGLHAAMEE--KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ------------------HHHHHHHHHHHH--CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 001122222322 3899999999999998766655688 88887 999999999998654
No 199
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.76 E-value=9.3e-10 Score=98.76 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
++||+|||||++|+++|..|+++|++|+|+|+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999975
No 200
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.76 E-value=6e-08 Score=86.93 Aligned_cols=100 Identities=18% Similarity=0.279 Sum_probs=71.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+|+|||||..|+.+|..|++.|.+|+|+|+.+.+.....
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~-------------------------------------- 234 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYY-------------------------------------- 234 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS--------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHH--------------------------------------
Confidence 356899999999999999999999999999999875521000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.. --...+.+.|.+ .|++++++++|+++.. ++++..+.+ +|+++.+|.||.|+|....
T Consensus 235 -------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 235 -------------DR----DLTDLMAKNMEE--HGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp -------------CH----HHHHHHHHHHHT--TTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred -------------HH----HHHHHHHHHHHh--CCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 00 001122233322 3899999999999986 333333555 6778999999999997543
No 201
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=3.2e-08 Score=87.98 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.+.- ..+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~~------------------- 213 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTY------------------DSE------------------- 213 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS------------------CHH-------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccccc------------------CHH-------------------
Confidence 4689999999999999999999999999999988652100 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCC--CEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~S~ 215 (294)
....+.+.|.+ .|++++++++|+++.. ++ +.+...+| +++.+|.||.|+|....
T Consensus 214 -------------------~~~~l~~~l~~--~gv~i~~~~~v~~i~~--~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 214 -------------------LTAPVAESLKK--LGIALHLGHSVEGYEN--GC-LLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp -------------------HHHHHHHHHHH--HTCEEETTCEEEEEET--TE-EEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred -------------------HHHHHHHHHHH--CCCEEEECCEEEEEEe--CC-EEEEECCCceEEEECCEEEECcCCCcC
Confidence 01122233322 2899999999999986 33 44554456 58999999999997654
No 202
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.75 E-value=1.5e-08 Score=90.55 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 46899999999999999999999999999999764
No 203
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.2e-08 Score=86.68 Aligned_cols=40 Identities=28% Similarity=0.447 Sum_probs=35.3
Q ss_pred cCCCCcEEEECCCHHHHHHHHHHHH--cCCceEEEecCCCCC
Q 022652 55 DVRKEDIVIVGAGIAGLATAVSLQR--LGIGSLVIEQADSLR 94 (294)
Q Consensus 55 ~~~~~dvvIIGaG~aGl~~A~~L~~--~G~~V~vlE~~~~~~ 94 (294)
....+||+||||||||++||++|++ .|++|+|+|+.+.++
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 4457899999999999999999985 499999999998764
No 204
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.75 E-value=8.8e-08 Score=84.98 Aligned_cols=99 Identities=18% Similarity=0.233 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||+|..|+.+|..|++.|.+|+++++.+.+.....
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~--------------------------------------- 187 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYF--------------------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTC---------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccC---------------------------------------
Confidence 46899999999999999999999999999999886521100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.. -....+.+.|.+ .|++++++++|++++..++++ .|.++++ ++.+|.||.|+|....
T Consensus 188 ------------d~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 188 ------------DK----EMVAEVQKSLEK--QAVIFHFEETVLGIEETANGI-VLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp ------------CH----HHHHHHHHHHHT--TTEEEEETCCEEEEEECSSCE-EEEESSC-EEEESEEEECSCCBCC
T ss_pred ------------CH----HHHHHHHHHHHH--cCCEEEeCCEEEEEEccCCeE-EEEECCC-EEEeCEEEECcCCCCC
Confidence 00 001122222322 389999999999999766664 6788777 8999999999998643
No 205
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.74 E-value=2.3e-08 Score=96.55 Aligned_cols=36 Identities=33% Similarity=0.570 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
.+||+|||||++|+++|..|+++|++|+|+|+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 579999999999999999999999999999998865
No 206
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.74 E-value=1.1e-07 Score=85.92 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=74.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+++|||||+.|+..|..+++.|.+|+|+++...+.. ..++
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~-------------------~D~e------------------ 264 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG-------------------FDQQ------------------ 264 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-------------------SCHH------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-------------------cchh------------------
Confidence 346899999999999999999999999999987543310 0000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
-...+.+.|.+ .+++++.++.+++++..+++ +.|.+.++.++.+|.|++|.|....
T Consensus 265 --------------------i~~~l~~~l~~--~gi~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 265 --------------------CAVKVKLYMEE--QGVMFKNGILPKKLTKMDDK-ILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp --------------------HHHHHHHHHHH--TTCEEEETCCEEEEEEETTE-EEEEETTSCEEEESEEEECSCEEES
T ss_pred --------------------HHHHHHHHHHh--hcceeecceEEEEEEecCCe-EEEEEcCCCeEEEEEEEEcccccCC
Confidence 01122333332 38999999999999988877 4488888888999999999997654
No 207
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.6e-08 Score=90.37 Aligned_cols=35 Identities=26% Similarity=0.512 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999974
No 208
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.73 E-value=3.6e-09 Score=93.85 Aligned_cols=37 Identities=32% Similarity=0.425 Sum_probs=34.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 4689999999999999999999999999999998865
No 209
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.72 E-value=1.9e-08 Score=89.60 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.++||+|||||++|+++|+.|+++|++|+|+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3689999999999999999999999999999993
No 210
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.71 E-value=5.7e-08 Score=82.44 Aligned_cols=94 Identities=15% Similarity=0.239 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 46799999999999999999999999999999875411
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC-----CCEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN-----GTRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G~ 212 (294)
...+.+.+.+. .|++++++++|+++..+++++..|.+.+ ++++.+|.||.|+|.
T Consensus 211 --------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 211 --------------------STIMQKRAEKN-EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp --------------------CHHHHHHHHHC-TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred --------------------CHHHHHHHHhc-CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 11233333332 3889999999999998776655566665 357999999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 270 ~p 271 (338)
T 3itj_A 270 TP 271 (338)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 211
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=4.3e-08 Score=87.43 Aligned_cols=99 Identities=24% Similarity=0.369 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+...-
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~~---------------------------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTM---------------------------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTTS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc----------------------------------------
Confidence 4689999999999999999999999999999987652100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CC--CEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G~ 212 (294)
.. --...+.+.|.+ .|++++++++|+++..++++ +.+.+. +| +++.+|.||.|+|.
T Consensus 217 ------------~~----~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 217 ------------DA----EIRKQFQRSLEK--QGMKFKLKTKVVGVDTSGDG-VKLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp ------------CH----HHHHHHHHHHHH--SSCCEECSEEEEEEECSSSS-EEEEEEESSSCCCEEEEESEEECCCCE
T ss_pred ------------cH----HHHHHHHHHHHH--cCCEEEeCCEEEEEEEcCCe-EEEEEEecCCCcceEEECCEEEECCCC
Confidence 00 001122233322 38999999999999876655 445654 44 57999999999998
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 278 ~p~ 280 (470)
T 1dxl_A 278 TPF 280 (470)
T ss_dssp EEC
T ss_pred CcC
Confidence 654
No 212
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.71 E-value=4.1e-08 Score=87.39 Aligned_cols=34 Identities=26% Similarity=0.616 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999987
No 213
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.70 E-value=3.4e-08 Score=88.67 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+.+|||||||++|+++|..|++.+++|+|||+.+.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 3467899999999999999999999999999999863
No 214
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.70 E-value=1.1e-07 Score=79.81 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 180 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------------------------------------------ 180 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC------------------------------------------
Confidence 46899999999999999999999999999998874410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~ 212 (294)
. ..+.+.|.+. .+++++++++++++..+++++..|.+. +|+ ++.+|.||.|+|.
T Consensus 181 -------------------~-~~~~~~l~~~-~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 181 -------------------A-PITLEHAKNN-DKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp -------------------C-HHHHHHHHTC-TTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------C-HHHHHHHhhC-CCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 0 1123333322 388999999999998775554345655 565 6899999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 240 ~p 241 (311)
T 2q0l_A 240 DV 241 (311)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 215
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.70 E-value=8.3e-08 Score=85.52 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.. .
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~---------------------------------------- 214 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR-E---------------------------------------- 214 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-S----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-C----------------------------------------
Confidence 46899999999999999999999999999999875411 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.. -....+.+.|.+ .|++++++++|+++..+++. +.|.+++ .++.+|.||.|+|.+..
T Consensus 215 ------------~~----~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~-~~v~~~~-~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 ------------DP----AIGEAVTAAFRA--EGIEVLEHTQASQVAHMDGE-FVLTTTH-GELRADKLLVATGRTPN 272 (467)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEETTCCEEEEEEETTE-EEEEETT-EEEEESEEEECSCEEES
T ss_pred ------------CH----HHHHHHHHHHHh--CCCEEEcCCEEEEEEEeCCE-EEEEECC-cEEEcCEEEECCCCCcC
Confidence 00 001122223322 38999999999999876554 4567764 47999999999998765
No 216
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.70 E-value=1.1e-07 Score=85.27 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+...- ..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~-------------------- 215 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ------------------DE-------------------- 215 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC------------------CH--------------------
Confidence 4689999999999999999999999999999988652100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec--CC--CEEEcCEEEecCCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDGIR 213 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G~~ 213 (294)
-....+.+.|.+ +++++++++|++++.+++++ .+.+. +| +++.+|.||.|+|..
T Consensus 216 ------------------~~~~~l~~~l~~---~V~i~~~~~v~~i~~~~~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 216 ------------------EMKRYAEKTFNE---EFYFDAKARVISTIEKEDAV-EVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp ------------------HHHHHHHHHHHT---TSEEETTCEEEEEEECSSSE-EEEEECTTCCEEEEEESEEEECSCCE
T ss_pred ------------------HHHHHHHHHHhh---CcEEEECCEEEEEEEcCCEE-EEEEEeCCCceEEEECCEEEEeeCCc
Confidence 001122222322 38999999999999877764 36664 66 579999999999986
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
..
T Consensus 274 p~ 275 (492)
T 3ic9_A 274 AN 275 (492)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.70 E-value=9.9e-08 Score=84.25 Aligned_cols=94 Identities=19% Similarity=0.328 Sum_probs=70.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+|+|+.+.+....
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~---------------------------------------- 186 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM---------------------------------------- 186 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS----------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc----------------------------------------
Confidence 4579999999999999999999999999999988652110
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
.. -....+.+.|.+. |++++++++|+++. ++. +.+++|+++.+|.||.|.|...
T Consensus 187 ------------d~----~~~~~~~~~l~~~--gV~i~~~~~v~~~~--~~~---v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 ------------DA----DMNQPILDELDKR--EIPYRLNEEINAIN--GNE---ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp ------------CG----GGGHHHHHHHHHT--TCCEEESCCEEEEE--TTE---EEETTSCEEECSEEEECCCEEE
T ss_pred ------------cc----hhHHHHHHHhhcc--ceEEEeccEEEEec--CCe---eeecCCeEEeeeeEEEEeceec
Confidence 00 0112333333332 89999999999875 333 7788999999999999999754
No 218
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.68 E-value=1.2e-07 Score=84.97 Aligned_cols=107 Identities=18% Similarity=0.264 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH----cCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR----LGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKS 133 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~----~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 133 (294)
..+|+|||||..|+.+|..|++ .|.+|+++++.+.+.... +
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~-----------------l------------------ 224 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI-----------------L------------------ 224 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT-----------------S------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc-----------------C------------------
Confidence 4689999999999999999987 488999999876431000 0
Q ss_pred CCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCC
Q 022652 134 EDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIR 213 (294)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 213 (294)
+. -....+.+.+.+ .|++++++++|+++..+++. +.|.+.+|+++.+|.||.|+|..
T Consensus 225 ----------------~~----~~~~~~~~~l~~--~GV~v~~~~~V~~i~~~~~~-~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 225 ----------------PE----YLSNWTMEKVRR--EGVKVMPNAIVQSVGVSSGK-LLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp ----------------CH----HHHHHHHHHHHT--TTCEEECSCCEEEEEEETTE-EEEEETTSCEEEESEEEECCCEE
T ss_pred ----------------CH----HHHHHHHHHHHh--cCCEEEeCCEEEEEEecCCe-EEEEECCCCEEECCEEEECCCCC
Confidence 00 001122222222 38999999999999876554 46888999999999999999986
Q ss_pred cH--hhhhcCC
Q 022652 214 SP--IAKWIGF 222 (294)
Q Consensus 214 S~--~~~~~~~ 222 (294)
.. +.+..|+
T Consensus 282 pn~~l~~~~gl 292 (493)
T 1m6i_A 282 PNVELAKTGGL 292 (493)
T ss_dssp ECCTTHHHHTC
T ss_pred ccHHHHHHcCC
Confidence 53 3344443
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=4.7e-08 Score=84.34 Aligned_cols=99 Identities=22% Similarity=0.297 Sum_probs=71.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCcE
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGRE 138 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 138 (294)
.+++|||||++|+.+|..|++.|.+|+++|+.+.+.. +.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~~---------------------------------- 183 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------LDE---------------------------------- 183 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------CCH----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------CCH----------------------------------
Confidence 5899999999999999999999999999999875521 000
Q ss_pred EEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH--h
Q 022652 139 LRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP--I 216 (294)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~--~ 216 (294)
-....+.+.|.+ .|++++++++|+++. .++ |.+++|+ +.+|.||.|+|.... +
T Consensus 184 -----------------~~~~~l~~~l~~--~gV~i~~~~~v~~i~--~~~---v~~~~g~-i~~D~vi~a~G~~p~~~l 238 (367)
T 1xhc_A 184 -----------------ELSNMIKDMLEE--TGVKFFLNSELLEAN--EEG---VLTNSGF-IEGKVKICAIGIVPNVDL 238 (367)
T ss_dssp -----------------HHHHHHHHHHHH--TTEEEECSCCEEEEC--SSE---EEETTEE-EECSCEEEECCEEECCHH
T ss_pred -----------------HHHHHHHHHHHH--CCCEEEcCCEEEEEE--eeE---EEECCCE-EEcCEEEECcCCCcCHHH
Confidence 001122223322 289999999999996 222 6778887 999999999997654 3
Q ss_pred hhhcCC
Q 022652 217 AKWIGF 222 (294)
Q Consensus 217 ~~~~~~ 222 (294)
.+.+++
T Consensus 239 l~~~gl 244 (367)
T 1xhc_A 239 ARRSGI 244 (367)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 344443
No 220
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.68 E-value=1.4e-07 Score=84.21 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+.... ..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~------------------~~-------------------- 221 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPAV------------------DE-------------------- 221 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCccc------------------CH--------------------
Confidence 4689999999999999999999999999999988552100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCC---CEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNG---TRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g---~~~~ad~vV~A~G~~S 214 (294)
-....+.+.|.+ .|++++++++|++++.++++ +.+.+.++ +++.+|.||.|+|...
T Consensus 222 ------------------~~~~~l~~~l~~--~Gv~v~~~~~v~~i~~~~~~-~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 222 ------------------QVAKEAQKILTK--QGLKILLGARVTGTEVKNKQ-VTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp ------------------HHHHHHHHHHHH--TTEEEEETCEEEEEEECSSC-EEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred ------------------HHHHHHHHHHHh--CCCEEEECCEEEEEEEcCCE-EEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 001122233322 38999999999999987766 44666654 5799999999999765
Q ss_pred H
Q 022652 215 P 215 (294)
Q Consensus 215 ~ 215 (294)
.
T Consensus 281 ~ 281 (476)
T 3lad_A 281 V 281 (476)
T ss_dssp C
T ss_pred c
Confidence 4
No 221
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.68 E-value=1e-07 Score=85.24 Aligned_cols=99 Identities=20% Similarity=0.295 Sum_probs=71.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+|+|||||++|+.+|..|++.|.+|+++|+.+.+... +..+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------~~~~------------------ 228 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------YDGD------------------ 228 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------SCHH------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------CCHH------------------
Confidence 3568999999999999999999999999999998754210 0000
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
-...+.+.+.+ .|++++++++|+++..+ ++++.+.+++ .++.+|.||.|+|....
T Consensus 229 --------------------~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~-~~v~~v~~~~-~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 229 --------------------MAEYIYKEADK--HHIEILTNENVKAFKGN-ERVEAVETDK-GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp --------------------HHHHHHHHHHH--TTCEEECSCCEEEEEES-SBEEEEEETT-EEEECSEEEECSCEEES
T ss_pred --------------------HHHHHHHHHHH--cCcEEEcCCEEEEEEcC-CcEEEEEECC-CEEEcCEEEECcCCCcC
Confidence 01122222222 38999999999999865 4444466654 47999999999998653
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.67 E-value=1.2e-07 Score=85.10 Aligned_cols=99 Identities=22% Similarity=0.368 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++|+.+.+.... ..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~-------------------- 239 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGGM------------------DG-------------------- 239 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSSS------------------CH--------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccccC------------------CH--------------------
Confidence 4689999999999999999999999999999988652100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---C--CEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---G--TRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g--~~~~ad~vV~A~G~ 212 (294)
-....+.+.|.+ .|++++++++|+++..++++ +.+.+.+ | +++.+|.||.|+|.
T Consensus 240 ------------------~~~~~l~~~l~~--~gV~v~~~~~v~~i~~~~~~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 240 ------------------EVAKQLQRMLTK--QGIDFKLGAKVTGAVKSGDG-AKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEECSEEEEEEEEETTE-EEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ------------------HHHHHHHHHHHh--CCCEEEECCeEEEEEEeCCE-EEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 001122233322 38999999999999987766 3355542 4 47999999999998
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 299 ~p~ 301 (491)
T 3urh_A 299 KPS 301 (491)
T ss_dssp EEC
T ss_pred ccC
Confidence 654
No 223
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.67 E-value=1.2e-07 Score=87.01 Aligned_cols=97 Identities=19% Similarity=0.310 Sum_probs=72.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+....
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPI---------------------------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccC----------------------------------------
Confidence 4689999999999999999999999999999987542110
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 215 (294)
.. -....+.+.|.+ .|++++++++|+++..++++ |.+.+|+++.+|.||.|+|....
T Consensus 227 ------------~~----~~~~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~---v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 227 ------------DY----EMAAYVHEHMKN--HDVELVFEDGVDALEENGAV---VRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp ------------CH----HHHHHHHHHHHH--TTCEEECSCCEEEEEGGGTE---EEETTSCEEECSEEEECSCEEEC
T ss_pred ------------CH----HHHHHHHHHHHH--cCCEEEECCeEEEEecCCCE---EEECCCCEEEcCEEEEccCCCCC
Confidence 00 001122222322 38999999999999865443 67788889999999999998653
No 224
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.66 E-value=1.4e-08 Score=94.91 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=35.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+.+..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 35689999999999999999999999999999998865
No 225
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.64 E-value=1.3e-07 Score=83.76 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 36899999999999999999999999999999973
No 226
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.64 E-value=1.6e-07 Score=83.98 Aligned_cols=100 Identities=19% Similarity=0.098 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+...- ..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------------------d~-------------------- 228 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSF------------------DS-------------------- 228 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS------------------CH--------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccccc------------------CH--------------------
Confidence 4689999999999999999999999999999987542100 00
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCc-eEEEEecC---C----CEEEcCEEEec
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNG-VTILELVN---G----TRIYANIVIGC 209 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~-~~~v~~~~---g----~~~~ad~vV~A 209 (294)
-....+.+.|.+ .|++++++++|++++.++++ .+.+.+.+ + +++.+|.||.|
T Consensus 229 ------------------~~~~~~~~~l~~--~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a 288 (478)
T 3dk9_A 229 ------------------MISTNCTEELEN--AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWA 288 (478)
T ss_dssp ------------------HHHHHHHHHHHH--TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEEC
T ss_pred ------------------HHHHHHHHHHHH--CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEe
Confidence 001122333322 38999999999999887665 34567765 2 57899999999
Q ss_pred CCCCcH
Q 022652 210 DGIRSP 215 (294)
Q Consensus 210 ~G~~S~ 215 (294)
+|....
T Consensus 289 ~G~~p~ 294 (478)
T 3dk9_A 289 IGRVPN 294 (478)
T ss_dssp SCEEES
T ss_pred eccccC
Confidence 997543
No 227
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.64 E-value=1.9e-07 Score=78.76 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------ 192 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------ 192 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------
Confidence 46899999999999999999999999999998764410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~ 212 (294)
...+.+.+.+ .+++++++++|+++..+++.+..|.+. +|+ ++.+|.||.|+|.
T Consensus 193 --------------------~~~l~~~l~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 193 --------------------ENAYVQEIKK--RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp --------------------CHHHHHHHHH--TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred --------------------CHHHHHHHhc--CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 0112233332 388999999999998775534445554 564 6899999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 251 ~p~ 253 (319)
T 3cty_A 251 IPQ 253 (319)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
No 228
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.64 E-value=2.3e-07 Score=83.04 Aligned_cols=98 Identities=18% Similarity=0.206 Sum_probs=70.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++++...... +..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------~d~-------------------- 227 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG-------------------FDQ-------------------- 227 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT-------------------SCH--------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc-------------------cCH--------------------
Confidence 45799999999999999999999999999998532200 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCC-----EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT-----RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~-----~~~ad~vV~A~G~ 212 (294)
-....+.+.|.+ .|++++++++|+++..++++.+.|.+.++. ++.+|.||.|+|.
T Consensus 228 ------------------~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 228 ------------------QMAELVAASMEE--RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp ------------------HHHHHHHHHHHH--TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred ------------------HHHHHHHHHHHh--CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 001122233322 389999999999999866654457766553 7899999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 288 ~p 289 (483)
T 3dgh_A 288 KG 289 (483)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 229
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.63 E-value=9.8e-08 Score=85.55 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEec
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQ 89 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~ 89 (294)
.++||+|||||++|+++|+.|++ .|++|+|+|+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 36899999999999999999999 9999999993
No 230
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.63 E-value=2.1e-07 Score=78.09 Aligned_cols=94 Identities=18% Similarity=0.328 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 181 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------ 181 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc------------------------------------------
Confidence 46899999999999999999999999999998874410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---CC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G~ 212 (294)
+ ..+.+.|.+ ..+++++++++++++..+++++..|.+.+ |+ ++.+|.||.|+|.
T Consensus 182 -------------------~-~~~~~~l~~-~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 182 -------------------D-QVLQDKLRS-LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp -------------------C-HHHHHHHHT-CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred -------------------c-HHHHHHHhh-CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 0 122333332 23889999999999987655544466543 53 6899999999996
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 241 ~p 242 (310)
T 1fl2_A 241 LP 242 (310)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 231
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.62 E-value=2.3e-07 Score=77.89 Aligned_cols=94 Identities=15% Similarity=0.264 Sum_probs=71.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 184 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------ 184 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------------------------------
Confidence 46899999999999999999999999999998875410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec--CCC--EEEcCEEEecCCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NGT--RIYANIVIGCDGIR 213 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~--~g~--~~~ad~vV~A~G~~ 213 (294)
. ..+.+.+.+. .|++++++++|+++..+++++..|.+. +|+ ++.+|.||.|+|..
T Consensus 185 -------------------~-~~~~~~~~~~-~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 185 -------------------A-PSTVEKVKKN-EKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp -------------------C-HHHHHHHHHC-TTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred -------------------C-HHHHHHHHhc-CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 0 1122222222 388999999999998877554445554 775 78999999999965
Q ss_pred c
Q 022652 214 S 214 (294)
Q Consensus 214 S 214 (294)
.
T Consensus 244 p 244 (315)
T 3r9u_A 244 V 244 (315)
T ss_dssp E
T ss_pred C
Confidence 4
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.62 E-value=1.6e-07 Score=79.78 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=70.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+... +
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~--------------------~-------------------- 191 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAH--------------------E-------------------- 191 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSC--------------------H--------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCcc--------------------H--------------------
Confidence 468999999999999999999999999999998754110 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CC--CEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G~ 212 (294)
.....+.+.+.+ .+++++++++|+++..+ +++..|.+. +| +++.+|.||.|+|.
T Consensus 192 ------------------~~~~~l~~~l~~--~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 192 ------------------ASVKELMKAHEE--GRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp ------------------HHHHHHHHHHHT--TSSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------------------HHHHHHHhcccc--CCeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 001122232322 38899999999999874 443346665 66 57999999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 251 ~p~ 253 (335)
T 2zbw_A 251 ITK 253 (335)
T ss_dssp EEE
T ss_pred CCC
Confidence 654
No 233
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.62 E-value=2.9e-08 Score=89.12 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEec
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQ 89 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~ 89 (294)
.++||+|||||++|+++|+.|++ .|++|+|+|+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 36899999999999999999999 9999999993
No 234
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.61 E-value=8.4e-08 Score=86.66 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
-+|||+|||||++|+.+|..+++.|.+|+|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36999999999999999999999999999999865
No 235
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.60 E-value=2.7e-07 Score=77.97 Aligned_cols=94 Identities=18% Similarity=0.295 Sum_probs=69.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------------------------------------------ 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------------------------------------------
Confidence 46899999999999999999999999999998874410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CCC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NGT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~--~~~ad~vV~A~G~ 212 (294)
...+.+.+.+. .+++++++++|+++..+ +++..|.+. +|+ ++.+|.||.|+|.
T Consensus 190 --------------------~~~~~~~l~~~-~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 190 --------------------NKVAQARAFAN-PKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred --------------------chHHHHHHHhc-CCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 01122333222 38899999999999875 333345654 564 7899999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 248 ~p~ 250 (325)
T 2q7v_A 248 VPN 250 (325)
T ss_dssp EES
T ss_pred CCC
Confidence 543
No 236
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.60 E-value=2.8e-07 Score=78.10 Aligned_cols=96 Identities=18% Similarity=0.311 Sum_probs=70.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------------------------------------- 196 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------------------------------------- 196 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------------------------------
Confidence 346899999999999999999999999999999875410
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCC--ceEEEEec---CC--CEEEcCEEEec
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGN--GVTILELV---NG--TRIYANIVIGC 209 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~--~~~~v~~~---~g--~~~~ad~vV~A 209 (294)
...+.+.+.+. .+++++++++|+++..+++ ++..|.+. +| +++.+|.||.|
T Consensus 197 ---------------------~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 197 ---------------------SKIMQQRALSN-PKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFA 254 (333)
T ss_dssp ---------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred ---------------------cHHHHHHHHhC-CCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEE
Confidence 01122222222 3889999999999987764 43335554 34 47899999999
Q ss_pred CCCCcH
Q 022652 210 DGIRSP 215 (294)
Q Consensus 210 ~G~~S~ 215 (294)
+|....
T Consensus 255 ~G~~p~ 260 (333)
T 1vdc_A 255 IGHEPA 260 (333)
T ss_dssp SCEEES
T ss_pred eCCccc
Confidence 997554
No 237
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.59 E-value=3.8e-07 Score=76.78 Aligned_cols=94 Identities=21% Similarity=0.314 Sum_probs=71.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------ 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc------------------------------------------
Confidence 46899999999999999999999999999999875411
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---CC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G~ 212 (294)
...+.+.+.+. .+++++++++|+++..++ +...|.+.+ |+ ++.+|.||.|+|.
T Consensus 192 --------------------~~~~~~~~~~~-~gv~~~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 192 --------------------QPIYVETVKKK-PNVEFVLNSVVKEIKGDK-VVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp --------------------CHHHHHHHHTC-TTEEEECSEEEEEEEESS-SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred --------------------CHHHHHHHHhC-CCcEEEeCCEEEEEeccC-ceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 01223333332 388999999999998763 334566655 65 7999999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 250 ~p~ 252 (323)
T 3f8d_A 250 DPP 252 (323)
T ss_dssp ECC
T ss_pred CCC
Confidence 553
No 238
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.57 E-value=9.6e-08 Score=82.05 Aligned_cols=98 Identities=23% Similarity=0.286 Sum_probs=70.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+.... .
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~--------------------~------------------- 203 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHG--------------------K------------------- 203 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCS--------------------H-------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCH--------------------H-------------------
Confidence 4579999999999999999999999999999987542100 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec--CC--CEEEcCEEEecCCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV--NG--TRIYANIVIGCDGIR 213 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~--~g--~~~~ad~vV~A~G~~ 213 (294)
....+.+.+.+ .+++++++++|+++..+++++..|.+. +| +.+.+|.||.|+|..
T Consensus 204 -------------------~~~~l~~~~~~--~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 204 -------------------TAHEVERARAN--GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp -------------------HHHSSHHHHHH--TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred -------------------HHHHHHHHhhc--CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 00111122211 278999999999998876654345553 66 478999999999965
Q ss_pred cH
Q 022652 214 SP 215 (294)
Q Consensus 214 S~ 215 (294)
..
T Consensus 263 p~ 264 (360)
T 3ab1_A 263 SN 264 (360)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 239
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.56 E-value=3.2e-07 Score=81.67 Aligned_cols=97 Identities=26% Similarity=0.402 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+....
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL---------------------------------------- 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC----------------------------------------
Confidence 4689999999999999999999999999999987552100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcC-CceEEEEec--CCC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSG-NGVTILELV--NGT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~-~~~~~v~~~--~g~--~~~ad~vV~A~G~ 212 (294)
...++.+.+.+.+. ++++++++|+++..++ ++ +.+.+. +|+ ++.+|.||.|+|.
T Consensus 212 -------------------~d~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 212 -------------------EDQDIVNTLLSILK-LNIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp -------------------CCHHHHHHHHHHHC-CCEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCE
T ss_pred -------------------CCHHHHHHHHhcCE-EEEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCC
Confidence 00122333333332 8999999999998876 55 447777 565 7999999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 271 ~p~ 273 (466)
T 3l8k_A 271 RPV 273 (466)
T ss_dssp EEC
T ss_pred Ccc
Confidence 654
No 240
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.56 E-value=6.8e-08 Score=83.11 Aligned_cols=38 Identities=37% Similarity=0.532 Sum_probs=34.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC-CCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA-DSL 93 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~-~~~ 93 (294)
...+||+|||||++||++|+.|+++|++|+|+|+. +.+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 35689999999999999999999999999999999 655
No 241
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.56 E-value=1.1e-08 Score=90.85 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-c------CCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR-L------GIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~-~------G~~V~vlE~~~~~ 93 (294)
.+||+|||||++|+++|..|++ . |++|+|+|+.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5799999999999999999999 7 9999999998765
No 242
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.56 E-value=4.5e-07 Score=81.22 Aligned_cols=98 Identities=15% Similarity=0.127 Sum_probs=69.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++++....... ..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~~-------------------d~~------------------- 226 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGF-------------------DQQ------------------- 226 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTS-------------------CHH-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccccC-------------------CHH-------------------
Confidence 457999999999999999999999999999986422100 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---CC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G~ 212 (294)
....+.+.|.+ .|++++++++++++...+++.+.+.+.+ |+ ++.+|.||.|+|.
T Consensus 227 -------------------~~~~l~~~l~~--~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 227 -------------------MSSLVTEHMES--HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp -------------------HHHHHHHHHHH--TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred -------------------HHHHHHHHHHH--CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 01122223322 3899999999999987555434465544 44 4789999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 286 ~p 287 (488)
T 3dgz_A 286 VP 287 (488)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 243
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.56 E-value=3.8e-07 Score=78.42 Aligned_cols=106 Identities=14% Similarity=0.196 Sum_probs=69.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+.... .
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~---------------~------------------------ 206 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD---------------A------------------------ 206 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC---------------C------------------------
Confidence 3579999999999999999999999999999987541000 0
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCC-CceEeCCceeEEEEcCCceEEEEecCCCEEE-cCEEEecCCCCcH
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPP-ESVQFSSELAKIETSGNGVTILELVNGTRIY-ANIVIGCDGIRSP 215 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~-ad~vV~A~G~~S~ 215 (294)
+ . ........+..+.+.|.+ .+ ++++.+++|+++..++++ +.|.+.+|+++. +|.||.|+|....
T Consensus 207 -----d--~---~~~~~~~~~~~l~~~l~~--~g~v~~~~~~~v~~i~~~~~~-~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 207 -----D--P---SVRLSPYTRQRLGNVIKQ--GARIEMNVHYTVKDIDFNNGQ-YHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp --------C---TTSCCHHHHHHHHHHHHT--TCCEEEECSCCEEEEEEETTE-EEEEESSSCCEEESSCCEECCCBCGG
T ss_pred -----C--C---CccCCHHHHHHHHHHHhh--CCcEEEecCcEEEEEEecCCc-eEEEecCCeEeccCCceEEeeccCCc
Confidence 0 0 000000011223333322 25 899999999999866555 457888887665 5999999997654
No 244
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.56 E-value=8.5e-08 Score=83.67 Aligned_cols=38 Identities=26% Similarity=0.419 Sum_probs=35.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~~~~ 94 (294)
.++||+|||||++||++|+.|+++ |++|+|+|+++.++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 468999999999999999999999 99999999987653
No 245
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.53 E-value=1.8e-08 Score=97.83 Aligned_cols=37 Identities=30% Similarity=0.472 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~~ 93 (294)
..+||+|||||+||+++|..|+++|+ +|+|+|+.+.+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 36799999999999999999999999 79999998755
No 246
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.50 E-value=1e-07 Score=88.66 Aligned_cols=38 Identities=32% Similarity=0.513 Sum_probs=35.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
...+||+|||||++|+++|..|+++|++|+|+|+.+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999998865
No 247
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.49 E-value=1.6e-07 Score=81.52 Aligned_cols=39 Identities=31% Similarity=0.440 Sum_probs=35.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+++.++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 357899999999999999999999999999999987663
No 248
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.48 E-value=3.7e-08 Score=87.50 Aligned_cols=37 Identities=27% Similarity=0.279 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC--CceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~~~ 93 (294)
..+||+|||||++|+.+|..|+++| ++|+|+|+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999999 999999998865
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.47 E-value=9.2e-07 Score=78.33 Aligned_cols=96 Identities=21% Similarity=0.327 Sum_probs=68.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+.....
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~--------------------------------------- 188 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSF--------------------------------------- 188 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTS---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhc---------------------------------------
Confidence 45899999999999999999999999999999885521100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcC-CCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQL-PPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
..++.+.+.+.+ ..+++++++.|+++..++ ++..+ ..+++++.+|.||.|+|...
T Consensus 189 --------------------~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v-~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 189 --------------------DKEVTDILEEKLKKHVNLRLQEITMKIEGEE-RVEKV-VTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp --------------------CHHHHHHHHHHHTTTSEEEESCCEEEEECSS-SCCEE-EETTEEEECSEEEECSCEEE
T ss_pred --------------------CHHHHHHHHHHHHhCcEEEeCCeEEEEeccC-cEEEE-EeCCCEEECCEEEEeeCCcc
Confidence 011222222222 128999999999998654 33323 44667899999999999864
No 250
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.46 E-value=6.2e-07 Score=79.71 Aligned_cols=134 Identities=15% Similarity=0.203 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCCCCcCceE----EEcccHHHHHHHcCCchhHHhccccccceEE
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSLRTGGTSL----TLFKNGWSVLDALGVGSDLRSQFLEIKGMAV 131 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~~~~g~~~----~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 131 (294)
..+|+|||||..|+.+|..|++. |.+|+++++.+.+......- ...+...+.+..+. .+.........
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~--~~~~~~~~~~~---- 300 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSRE--HAERERLLREY---- 300 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSC--HHHHHHHHHHT----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCC--HHHHHHHHHHh----
Confidence 56899999999999999999999 99999999988653211100 00111111111111 11000000000
Q ss_pred EcCCCcEEEEecCCCCCCCcceeeeeH---HHHHHHHH----hcCCCCceEeCCceeEEEEcCCceEEEEec---CCC--
Q 022652 132 KSEDGRELRSFGFKDEDASQEVRAVER---RILLETLA----NQLPPESVQFSSELAKIETSGNGVTILELV---NGT-- 199 (294)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~L~----~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g~-- 199 (294)
. ...+..++. ..+.+.+. ....+++++++++|++++.++++ +.|.+. +|+
T Consensus 301 --------------~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~-~~v~~~~~~~g~~~ 362 (463)
T 3s5w_A 301 --------------H---NTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQG-IELALRDAGSGELS 362 (463)
T ss_dssp --------------G---GGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTE-EEEEEEETTTCCEE
T ss_pred --------------h---ccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCE-EEEEEEEcCCCCeE
Confidence 0 000000111 11111111 11148899999999999987765 556665 665
Q ss_pred EEEcCEEEecCCCCcH
Q 022652 200 RIYANIVIGCDGIRSP 215 (294)
Q Consensus 200 ~~~ad~vV~A~G~~S~ 215 (294)
++.+|.||.|+|....
T Consensus 363 ~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 363 VETYDAVILATGYERQ 378 (463)
T ss_dssp EEEESEEEECCCEECC
T ss_pred EEECCEEEEeeCCCCC
Confidence 4899999999997543
No 251
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.43 E-value=4.5e-07 Score=81.40 Aligned_cols=39 Identities=36% Similarity=0.513 Sum_probs=35.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 346899999999999999999999999999999998764
No 252
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.43 E-value=5.2e-07 Score=76.62 Aligned_cols=94 Identities=20% Similarity=0.310 Sum_probs=67.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~----------------------------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRAS----------------------------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSC-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCcc-----------------------------------------
Confidence 468999999999999999999999999999988744100
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEec---CC--CEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELV---NG--TRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~---~g--~~~~ad~vV~A~G~ 212 (294)
..+.+.+.+. .+++++++++|+++..++. +..|.+. +| +++.+|.||.|+|.
T Consensus 194 ---------------------~~~~~~~~~~-~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 194 ---------------------KIMLDRARNN-DKIRFLTNHTVVAVDGDTT-VTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp ---------------------TTHHHHHHHC-TTEEEECSEEEEEEECSSS-CCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred ---------------------HHHHHHHhcc-CCcEEEeCceeEEEecCCc-EeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 0112222222 3889999999999986642 2224443 34 47899999999997
Q ss_pred CcH
Q 022652 213 RSP 215 (294)
Q Consensus 213 ~S~ 215 (294)
...
T Consensus 251 ~p~ 253 (335)
T 2a87_A 251 EPR 253 (335)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
No 253
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.42 E-value=2.2e-07 Score=80.16 Aligned_cols=37 Identities=35% Similarity=0.530 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
++||+|||||++|+++|+.|+++|++|+|+|+++.++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 37 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIG 37 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCC
Confidence 3689999999999999999999999999999987653
No 254
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.41 E-value=1.3e-06 Score=78.77 Aligned_cols=94 Identities=16% Similarity=0.315 Sum_probs=70.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.+.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc------------------------------------------
Confidence 46899999999999999999999999999998875410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC---CC--EEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN---GT--RIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~---g~--~~~ad~vV~A~G~ 212 (294)
+ ..+.+.|. ...|++++++++++++..+++++..+.+.+ |+ ++.+|.||.|.|.
T Consensus 393 -------------------~-~~l~~~l~-~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 393 -------------------D-QVLQDKVR-SLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp -------------------C-HHHHHHHT-TCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred -------------------C-HHHHHHHh-cCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 0 11222232 224889999999999987665544566643 53 6899999999996
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 452 ~p 453 (521)
T 1hyu_A 452 LP 453 (521)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 255
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.40 E-value=3.4e-07 Score=81.91 Aligned_cols=56 Identities=18% Similarity=0.379 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcCCCCceEeCC--ceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcHh
Q 022652 158 RRILLETLANQLPPESVQFSS--ELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSPI 216 (294)
Q Consensus 158 ~~~l~~~L~~~~~~v~i~~~~--~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 216 (294)
...+.+.|++.+...+|++++ +|++|..++++ |.+.+|+++.||.||.|.......
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~---v~~~~G~~~~ad~VI~a~p~~~~~ 272 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKT---ITFSNGEVVSYDYLISTVPFDNLL 272 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTE---EEETTSCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCE---EEECCCCEEECCEEEECCCHHHHH
Confidence 456777777777444899995 59999977665 456888889999999998766544
No 256
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.39 E-value=8.4e-07 Score=74.96 Aligned_cols=92 Identities=18% Similarity=0.176 Sum_probs=68.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~----------------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH----------------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC-----------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc-----------------------------------------
Confidence 467999999999999999999999999999988754110
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecC-----CCEEEcCEEEecCCC
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVN-----GTRIYANIVIGCDGI 212 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~-----g~~~~ad~vV~A~G~ 212 (294)
....+.|.+ .+++++.+++|+++..+++ ...|.+.+ ++++.+|.||.|+|.
T Consensus 193 ---------------------~~~~~~l~~--~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 ---------------------EHSVENLHA--SKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp ---------------------HHHHHHHHH--SSCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred ---------------------HHHHHHHhc--CCeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 001112222 2889999999999987655 34466554 347899999999996
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 249 ~p 250 (332)
T 3lzw_A 249 VS 250 (332)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.38 E-value=7.7e-07 Score=79.88 Aligned_cols=95 Identities=21% Similarity=0.222 Sum_probs=65.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--------------CCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccc
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--------------GIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFL 124 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--------------G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~ 124 (294)
..++|||||++|+.+|..|+.. ..+|+|+|..+.+.+.-. +
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~------------------~------- 272 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFE------------------K------- 272 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSC------------------H-------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCC------------------H-------
Confidence 4699999999999999998754 368999999986521100 0
Q ss_pred cccceEEEcCCCcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCce-EEEEecCCC----
Q 022652 125 EIKGMAVKSEDGRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGV-TILELVNGT---- 199 (294)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~-~~v~~~~g~---- 199 (294)
-....+.+.|.+. |++++++++|++++. +++ ..+...+|+
T Consensus 273 -------------------------------~~~~~~~~~L~~~--GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~ 317 (502)
T 4g6h_A 273 -------------------------------KLSSYAQSHLENT--SIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEE 317 (502)
T ss_dssp -------------------------------HHHHHHHHHHHHT--TCEEETTEEEEEECS--SEEEEEEECTTSCEEEE
T ss_pred -------------------------------HHHHHHHHHHHhc--ceeeecCceEEEEeC--CceEEEEEecCccccee
Confidence 0111223333332 899999999999853 332 234455653
Q ss_pred EEEcCEEEecCCCC
Q 022652 200 RIYANIVIGCDGIR 213 (294)
Q Consensus 200 ~~~ad~vV~A~G~~ 213 (294)
++.+|.||.|+|..
T Consensus 318 ~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 318 TIPYGTLIWATGNK 331 (502)
T ss_dssp EEECSEEEECCCEE
T ss_pred eeccCEEEEccCCc
Confidence 69999999999964
No 258
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.35 E-value=2.3e-07 Score=80.48 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 358999999999999999999999999999999865
No 259
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.34 E-value=3.9e-06 Score=77.09 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
..+|+|||||..|+.+|..|++.|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999987
No 260
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.34 E-value=5.6e-07 Score=78.02 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
++||+|||||++|+++|+.|+++|++|+|+|+++.++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999988664
No 261
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.30 E-value=5.1e-06 Score=74.94 Aligned_cols=98 Identities=19% Similarity=0.107 Sum_probs=65.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+++|||||..|+.+|..|++.|.+|+++++....... ..+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~-------------------d~~------------------- 251 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGF-------------------DQD------------------- 251 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTS-------------------CHH-------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccccC-------------------CHH-------------------
Confidence 457999999999999999999999999999985321100 000
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCC---ceEEE--EecCC-C--EEEcCEEEec
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGN---GVTIL--ELVNG-T--RIYANIVIGC 209 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~---~~~~v--~~~~g-~--~~~ad~vV~A 209 (294)
....+.+.|.+ .|++++++++++++...++ +.+.+ ...++ + ++.+|.||.|
T Consensus 252 -------------------~~~~~~~~l~~--~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a 310 (519)
T 3qfa_A 252 -------------------MANKIGEHMEE--HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLA 310 (519)
T ss_dssp -------------------HHHHHHHHHHH--TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEEC
T ss_pred -------------------HHHHHHHHHHH--CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEe
Confidence 01122222322 3899999998888875432 22323 33455 2 5689999999
Q ss_pred CCCCc
Q 022652 210 DGIRS 214 (294)
Q Consensus 210 ~G~~S 214 (294)
+|...
T Consensus 311 ~G~~p 315 (519)
T 3qfa_A 311 IGRDA 315 (519)
T ss_dssp SCEEE
T ss_pred cCCcc
Confidence 99754
No 262
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.28 E-value=9.4e-07 Score=82.50 Aligned_cols=97 Identities=9% Similarity=0.064 Sum_probs=69.2
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCC
Q 022652 58 KEDIVIVG--AGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSED 135 (294)
Q Consensus 58 ~~dvvIIG--aG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 135 (294)
..+|+||| +|..|+.+|..|++.|.+|+++++.+.+.....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~------------------------------------- 565 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN------------------------------------- 565 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG-------------------------------------
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc-------------------------------------
Confidence 45799999 999999999999999999999998875421000
Q ss_pred CcEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEe---cCCCEEEcCEEEecCCC
Q 022652 136 GRELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILEL---VNGTRIYANIVIGCDGI 212 (294)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~---~~g~~~~ad~vV~A~G~ 212 (294)
.. .....+.+.|.+. |++++.+++|+++..+ + ..+.. .+++++.+|.||+|+|.
T Consensus 566 --------------~~----~~~~~l~~~l~~~--GV~i~~~~~V~~i~~~--~-~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 566 --------------NT----FEVNRIQRRLIEN--GVARVTDHAVVAVGAG--G-VTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp --------------GG----TCHHHHHHHHHHT--TCEEEESEEEEEEETT--E-EEEEETTTCCEEEEECSEEEEESCE
T ss_pred --------------cc----hhHHHHHHHHHHC--CCEEEcCcEEEEEECC--e-EEEEEccCCeEEEEECCEEEECCCC
Confidence 00 1123344444433 8999999999999743 3 22332 24557999999999997
Q ss_pred Cc
Q 022652 213 RS 214 (294)
Q Consensus 213 ~S 214 (294)
..
T Consensus 623 ~p 624 (690)
T 3k30_A 623 LP 624 (690)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 263
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=8.2e-07 Score=79.76 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999985
No 264
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.24 E-value=3.2e-06 Score=70.18 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=65.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.| +|+++++.+..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~-------------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE-------------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------------------------------------
Confidence 568999999999999999999999 99999877631
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+. ..+.+.|.+ .|++++. ++|+++..++ .|.+.+|+++.+|.||.|+|...
T Consensus 176 ------------------~~-~~~~~~l~~--~gv~i~~-~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 176 ------------------PD-ADQHALLAA--RGVRVET-TRIREIAGHA----DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp ------------------CC-HHHHHHHHH--TTCEEEC-SCEEEEETTE----EEEETTSCEEEESEEEECCEEEC
T ss_pred ------------------CC-HHHHHHHHH--CCcEEEc-ceeeeeecCC----eEEeCCCCEEEEEEEEEccCccc
Confidence 00 012222322 2788884 8999887432 47888999999999999999753
No 265
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.24 E-value=8.6e-07 Score=78.84 Aligned_cols=35 Identities=29% Similarity=0.452 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.++||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46899999999999999999999999999999973
No 266
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.23 E-value=6.1e-06 Score=69.15 Aligned_cols=36 Identities=22% Similarity=0.526 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+....
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 467999999999999999999999999999987643
No 267
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.21 E-value=1e-06 Score=81.07 Aligned_cols=38 Identities=29% Similarity=0.313 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 46899999999999999999999999999999987653
No 268
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.19 E-value=3.4e-06 Score=76.37 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999986
No 269
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.17 E-value=1.3e-06 Score=79.31 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|++|||+|++|+.+|..|++.|++|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 578999999999999999999999999999999864
No 270
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.16 E-value=5.6e-06 Score=79.98 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=68.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCCc
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDGR 137 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 137 (294)
..+|+|||+|..|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~------------------------------------------ 321 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA------------------------------------------ 321 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH------------------------------------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch------------------------------------------
Confidence 35799999999999999999999999999999875410
Q ss_pred EEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEc-CCceEEEEecC-------C--CEEEcCEEE
Q 022652 138 ELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETS-GNGVTILELVN-------G--TRIYANIVI 207 (294)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~-~~~~~~v~~~~-------g--~~~~ad~vV 207 (294)
. .+.|.+ .|+++++++.|+++..+ ++++..|.+.+ | +++.+|.||
T Consensus 322 --------------------~---~~~l~~--~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv 376 (965)
T 2gag_A 322 --------------------A---AAQAVA--DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLA 376 (965)
T ss_dssp --------------------H---HHHHHH--TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEE
T ss_pred --------------------h---HHHHHh--CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEE
Confidence 0 111211 28899999999999874 34433455543 4 579999999
Q ss_pred ecCCCCc
Q 022652 208 GCDGIRS 214 (294)
Q Consensus 208 ~A~G~~S 214 (294)
.|.|...
T Consensus 377 ~a~G~~P 383 (965)
T 2gag_A 377 VAGGFNP 383 (965)
T ss_dssp EECCEEE
T ss_pred ECCCcCc
Confidence 9999654
No 271
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.15 E-value=1.2e-06 Score=79.25 Aligned_cols=36 Identities=39% Similarity=0.466 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~~~~ 92 (294)
..||+||||||.+|+.+|..|++ .|++|+|||++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 47999999999999999999997 6899999999864
No 272
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.15 E-value=2.2e-06 Score=80.51 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
...+||+|||||++|+++|+.|+++|++|+|+|+.+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34689999999999999999999999999999998765
No 273
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.12 E-value=7.2e-06 Score=74.29 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|+|||+|..|+.+|..|++.+.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 46899999999999999999999999999999985
No 274
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.12 E-value=2e-05 Score=69.97 Aligned_cols=36 Identities=11% Similarity=0.195 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 468999999999999999999999999999988754
No 275
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.11 E-value=7.6e-06 Score=72.35 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCc-eEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~-V~vlE~~~~ 92 (294)
..+|+|||+|.+|+.+|..|++.|.+ |+++++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 46899999999999999999999999 999998763
No 276
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.11 E-value=2.8e-06 Score=78.88 Aligned_cols=38 Identities=32% Similarity=0.672 Sum_probs=35.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 45899999999999999999999999999999988663
No 277
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.09 E-value=2.4e-06 Score=78.49 Aligned_cols=35 Identities=23% Similarity=0.474 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
...+||+|||||++|+++|..|+++|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45789999999999999999999999999999984
No 278
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.08 E-value=5.1e-06 Score=78.77 Aligned_cols=38 Identities=32% Similarity=0.672 Sum_probs=35.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLR 94 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~ 94 (294)
..++|+|||||++||++|+.|+++|++|+|+|+.+.++
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 45799999999999999999999999999999988764
No 279
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.97 E-value=4.5e-06 Score=75.98 Aligned_cols=36 Identities=33% Similarity=0.398 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcC-CceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G-~~V~vlE~~~~ 92 (294)
..||+||||||.|||.+|..|++.| .+|+|||++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999875
No 280
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.97 E-value=3.1e-06 Score=76.78 Aligned_cols=35 Identities=11% Similarity=0.312 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999985
No 281
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.95 E-value=3.4e-06 Score=76.31 Aligned_cols=35 Identities=34% Similarity=0.462 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..||+||||||.+|+.+|..|++ |.+|+|||++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 46999999999999999999999 999999999864
No 282
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.95 E-value=9e-06 Score=76.31 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=32.0
Q ss_pred CCcEEEEC--CCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVG--AGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIG--aG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|+||| ||..|+.+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 99999999999999999999999988
No 283
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.91 E-value=1.5e-05 Score=70.64 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~~ 93 (294)
...+|+|||||..|+-+|..+.+.|. +|+++++.+..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 35689999999999999999999998 59999988743
No 284
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.90 E-value=5.9e-05 Score=73.42 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
.+|+|||||..|+.+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 899999886
No 285
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.90 E-value=4.1e-05 Score=67.88 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHH--------------------HcCC-ceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQ--------------------RLGI-GSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~--------------------~~G~-~V~vlE~~~~~ 93 (294)
..+|+|||+|..|+.+|..|+ +.|. +|+|+++....
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 468999999999999999999 6788 79999998744
No 286
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.88 E-value=4.8e-05 Score=70.73 Aligned_cols=41 Identities=20% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecCC--CEEEcCEEEecCCCCcH
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIRSP 215 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~S~ 215 (294)
|++++.+++|+++. +++ +.+. .+| +++.+|.||.|+|....
T Consensus 587 GV~v~~~~~v~~i~--~~~-v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 587 GVKMIPGVSYQKID--DDG-LHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp TCEEECSCEEEEEE--TTE-EEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred CCEEEeCcEEEEEe--CCe-EEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 89999999999987 344 3243 566 57999999999997653
No 287
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.87 E-value=8e-06 Score=74.35 Aligned_cols=35 Identities=43% Similarity=0.654 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~ 91 (294)
..||+||||||.|||.+|..|++. |.+|+|||+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 89999999987
No 288
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.86 E-value=0.0001 Score=61.62 Aligned_cols=36 Identities=14% Similarity=0.373 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 458999999999999999999999999999998765
No 289
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.85 E-value=1.2e-05 Score=72.26 Aligned_cols=35 Identities=23% Similarity=0.443 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|++|||+|++|+.+|..|++.|++|+|+|++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999999999999976
No 290
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.84 E-value=7.1e-06 Score=75.97 Aligned_cols=36 Identities=36% Similarity=0.517 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC--------CceEEEecCC-CC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLG--------IGSLVIEQAD-SL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G--------~~V~vlE~~~-~~ 93 (294)
.++|+|||||++||++|+.|+++| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999988 66
No 291
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.84 E-value=5.2e-05 Score=67.13 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--------------------CC-ceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--------------------GI-GSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--------------------G~-~V~vlE~~~~~ 93 (294)
..+|+|||+|.+|+.+|..|++. |. +|+|++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999999974 65 89999998744
No 292
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.81 E-value=1.6e-05 Score=71.41 Aligned_cols=35 Identities=23% Similarity=0.509 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|++|||+|++|+.+|..|++.|.+|+|+|++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46899999999999999999999999999999975
No 293
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.79 E-value=8.1e-06 Score=74.14 Aligned_cols=36 Identities=39% Similarity=0.425 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-cCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~~~~~ 93 (294)
.||++|||||.+|+.+|..|++ .|.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 79999999998643
No 294
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.77 E-value=2.4e-05 Score=71.54 Aligned_cols=37 Identities=35% Similarity=0.477 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-cCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQR-LGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE~~~~~ 93 (294)
..+|++|||+|++|+.+|..|++ .|++|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56999999999999999999999 79999999998643
No 295
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.76 E-value=4.9e-05 Score=69.52 Aligned_cols=56 Identities=18% Similarity=0.250 Sum_probs=43.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDAL 113 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~l 113 (294)
.+|||+|||+|+.|+.+|..|++.|.+|+++||++..++...+..+ ....+++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l-~~l~~w~~~~ 62 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF-SGLLSWLKEY 62 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHHHT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH-HHHHHHHHHh
Confidence 4799999999999999999999999999999999988544333332 2334444444
No 296
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.69 E-value=2.3e-05 Score=71.05 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~~~ 93 (294)
..+|++|||+|++|+.+|..|++. |.+|+|||++...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999998 9999999998643
No 297
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.67 E-value=6.5e-05 Score=63.82 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 799999874
No 298
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.61 E-value=0.00029 Score=58.69 Aligned_cols=90 Identities=12% Similarity=0.161 Sum_probs=61.9
Q ss_pred CCcEEEECCCH-HHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCchhHHhccccccceEEEcCCC
Q 022652 58 KEDIVIVGAGI-AGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVGSDLRSQFLEIKGMAVKSEDG 136 (294)
Q Consensus 58 ~~dvvIIGaG~-aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 136 (294)
..+++|||||. +++.+|..+++.|.+|+++++.....
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~------------------------------------------ 183 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS------------------------------------------ 183 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC------------------------------------------
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch------------------------------------------
Confidence 45688888775 56888888888899999998766431
Q ss_pred cEEEEecCCCCCCCcceeeeeHHHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 137 RELRSFGFKDEDASQEVRAVERRILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
..+.+.|.+ .++.++.+ .++.+..+++.+..|++.+|+++.+|.+|++.|...
T Consensus 184 ----------------------~~~~~~l~~--~g~~~~~~-~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~ 236 (304)
T 4fk1_A 184 ----------------------QTIMDELSN--KNIPVITE-SIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFR 236 (304)
T ss_dssp ----------------------HHHHHHHHT--TTCCEECS-CEEEEESGGGCCCEEEETTSCEECCCEEEECCEEEC
T ss_pred ----------------------hhhhhhhhc--cceeEeee-eEEEeecCCCeeeeeeccccceeeecceeeeecccc
Confidence 011222222 26677655 467776555555568999999999998888887543
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.60 E-value=0.00022 Score=62.14 Aligned_cols=39 Identities=15% Similarity=0.097 Sum_probs=33.2
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
|++++++++|+++.. ++ |.+++|+++.+|.||.|+|...
T Consensus 232 gV~~~~~~~v~~i~~--~~---v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 232 GIKLVHNFKIKEIRE--HE---IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp TCEEECSCCEEEECS--SE---EEETTSCEEECSEEEEECCEEC
T ss_pred CCEEEcCCceEEECC--Ce---EEECCCCEEeeeEEEECCCCCc
Confidence 899999999999963 33 6788898999999999999754
No 300
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.27 E-value=0.00048 Score=60.44 Aligned_cols=38 Identities=8% Similarity=0.011 Sum_probs=29.5
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecC----CCEEEcCEEEecCCCC
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVN----GTRIYANIVIGCDGIR 213 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~----g~~~~ad~vV~A~G~~ 213 (294)
|++++++++|++++. ++ +.+.+ ++++.+|.||.|.|..
T Consensus 214 GV~i~~~~~v~~v~~--~~---v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 214 NIDWIANVAVKAIEP--DK---VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCEEECSCEEEEECS--SE---EEEECTTSCEEEEECSEEEEECEEE
T ss_pred CCEEEeCCEEEEEeC--Ce---EEEEecCCCceEEeeeEEEECCCCc
Confidence 899999999999953 33 33333 5689999999998864
No 301
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.27 E-value=0.00058 Score=60.06 Aligned_cols=39 Identities=8% Similarity=0.016 Sum_probs=28.6
Q ss_pred CCceEeCCceeEEEEcCCceEEEEe--cC-----CCEEEcCEEEecCCC
Q 022652 171 PESVQFSSELAKIETSGNGVTILEL--VN-----GTRIYANIVIGCDGI 212 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~--~~-----g~~~~ad~vV~A~G~ 212 (294)
|++++++++|+++.. +++. +.. .+ ++++.+|.||.|.|.
T Consensus 222 gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 222 GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCC
Confidence 899999999999963 3422 322 23 457899999999884
No 302
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.26 E-value=0.00038 Score=50.94 Aligned_cols=36 Identities=25% Similarity=0.260 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+.+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 355799999999999999999999999999999864
No 303
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.17 E-value=0.00091 Score=60.52 Aligned_cols=36 Identities=11% Similarity=0.371 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||+|..|+.+|..|++.|.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 468999999999999999999999999999987744
No 304
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.15 E-value=0.00054 Score=51.05 Aligned_cols=35 Identities=26% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|+|+|..|..+|..|.+.|.+|+++|+.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999998764
No 305
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.11 E-value=0.00057 Score=49.93 Aligned_cols=34 Identities=18% Similarity=0.426 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 306
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.01 E-value=0.00083 Score=48.73 Aligned_cols=33 Identities=30% Similarity=0.396 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|+|||+|..|..+|..|.+.|++|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 307
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.90 E-value=0.0034 Score=56.18 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~~ 93 (294)
.++|+|||+|.+|+.++..|++. +.+|+++-|.+..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 46799999999999999999976 6799999887643
No 308
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.89 E-value=0.0015 Score=48.43 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+.+|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999974
No 309
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.83 E-value=0.0013 Score=46.10 Aligned_cols=34 Identities=26% Similarity=0.307 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G-~~V~vlE~~~ 91 (294)
...|+|+|+|..|..++..|.+.| ++|+++++.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 457999999999999999999999 8999999875
No 310
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.67 E-value=0.002 Score=53.59 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35799999999999999999999999999998763
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.67 E-value=0.0016 Score=54.47 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|.-|...|..++..|++|+|+|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999998764
No 312
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.65 E-value=0.011 Score=50.95 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=36.9
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCc
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRS 214 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 214 (294)
+++++.++++..++.+.+... +.+.+|+++.+|.|+.|.|...
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~-v~~~~g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMT-VETSFGETFKAAVINLIPPQRA 258 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTE-EEETTSCEEECSEEEECCCEEE
T ss_pred CcEEEeCceEEEEEecccceE-EEcCCCcEEEeeEEEEecCcCC
Confidence 788999999999988776634 8999999999999999999653
No 313
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.64 E-value=0.0024 Score=46.36 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..|+|+|+|..|..+|..|.+.|++|+++|+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 314
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.56 E-value=0.0028 Score=53.50 Aligned_cols=36 Identities=11% Similarity=0.312 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
...+|+|||||..|..+|..|++.|+ +|+++|....
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999999999999999999998 9999998864
No 315
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.51 E-value=0.0035 Score=47.92 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL-GIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~-G~~V~vlE~~~~ 92 (294)
..+|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 45799999999999999999999 999999998763
No 316
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.40 E-value=0.0029 Score=53.04 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999999864
No 317
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.39 E-value=0.0035 Score=52.57 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|+|||+|..|.+.|..|++.|.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999865
No 318
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.37 E-value=0.011 Score=52.82 Aligned_cols=52 Identities=15% Similarity=0.075 Sum_probs=40.4
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecCCCEEEcCEEEecCCCCcH--hhhhcCCC
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVNGTRIYANIVIGCDGIRSP--IAKWIGFS 223 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~--~~~~~~~~ 223 (294)
|+++++++.|+++..++ ++..+.+.+|+++.+|.||.|.|.... +.+.+|+.
T Consensus 271 GV~v~~~~~v~~i~~~~-~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNE-KVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp TCEEEECSSEEEEECSS-SCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred CcEEEeCCeeEEEecCC-ceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 78999999999998654 344577888889999999999998754 44555553
No 319
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.35 E-value=0.0029 Score=49.90 Aligned_cols=33 Identities=18% Similarity=0.337 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 599999999999999999999999999998763
No 320
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.25 E-value=0.0039 Score=52.11 Aligned_cols=33 Identities=39% Similarity=0.436 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|+|||+|..|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999864
No 321
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.21 E-value=0.0058 Score=50.27 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 35799999999999999999999999999998763
No 322
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.09 E-value=0.0057 Score=50.64 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|+|||+|..|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 323
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.09 E-value=0.0061 Score=53.20 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+..|+|||.|.+||.+|..|+++|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45689999999999999999999999999999875
No 324
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.07 E-value=0.0074 Score=47.24 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|.+.|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998764
No 325
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.07 E-value=0.0068 Score=47.85 Aligned_cols=35 Identities=14% Similarity=0.276 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|+|||||-+|...+..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999998754
No 326
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.06 E-value=0.006 Score=54.15 Aligned_cols=34 Identities=24% Similarity=0.521 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||+|..|+.+|..|++.|++|+++|+..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999875
No 327
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.03 E-value=0.0075 Score=50.91 Aligned_cols=32 Identities=31% Similarity=0.347 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
.+|+|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999985
No 328
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.03 E-value=0.01 Score=50.68 Aligned_cols=36 Identities=22% Similarity=0.452 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|+|||+|.+|+.+|..|...|.+|+++|+...
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999874
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.02 E-value=0.0069 Score=50.69 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|+|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999999999 999999875
No 330
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.99 E-value=0.0078 Score=49.46 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 599999999999999999999999999998764
No 331
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.96 E-value=0.0062 Score=53.51 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|+|||.|.+|+++|..|+++|++|++.|.....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 357999999999999999999999999999987643
No 332
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.94 E-value=0.0089 Score=50.07 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..+|+|||+|..|..+|..|++.|+ +|+++|+...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3579999999999999999999999 9999998763
No 333
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.94 E-value=0.0075 Score=50.19 Aligned_cols=33 Identities=30% Similarity=0.369 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999865
No 334
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.94 E-value=0.0091 Score=51.41 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|+|||+|.+|+.+|..|...|.+|+++|+...
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 346899999999999999999999999999999874
No 335
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.94 E-value=0.0087 Score=49.92 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999999864
No 336
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.92 E-value=0.0077 Score=53.02 Aligned_cols=34 Identities=32% Similarity=0.542 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+|.|||+|..|+.+|..|++.|++|+++|+.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999998753
No 337
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.90 E-value=0.0088 Score=52.47 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..++.|||.|..|+.+|..|++.|++|+++|+++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 568999999999999999999999999999998753
No 338
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.89 E-value=0.0089 Score=50.90 Aligned_cols=34 Identities=35% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||+|..|.++|..|++.|++|.++++.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999875
No 339
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.89 E-value=0.01 Score=49.98 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..+|+|||||..|..+|..|++.|+ +|+++|....
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3579999999999999999999999 9999999764
No 340
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.87 E-value=0.0085 Score=52.81 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|+|||.|.+|+++|..|+++|++|++.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999865
No 341
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.83 E-value=0.0057 Score=49.86 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|+|||||-+|...+..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35679999999999999999999999999999765
No 342
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.80 E-value=0.009 Score=48.15 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4579999999999999999999998 899999886
No 343
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.80 E-value=0.0092 Score=52.78 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHc-CC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRL-GI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~-G~-~V~vlE~~~~ 92 (294)
..+|.|||+|..|+.+|..|++. |+ +|+++|+.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 45799999999999999999999 99 9999999875
No 344
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.77 E-value=0.013 Score=49.19 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..+|+|||+|..|..+|..|+..|+ +|.++|....
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3579999999999999999999998 9999998763
No 345
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.73 E-value=0.013 Score=51.55 Aligned_cols=35 Identities=23% Similarity=0.499 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|.-|...|..|++.|++|+++|+.+.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 35799999999999999999999999999999874
No 346
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.64 E-value=0.0042 Score=54.88 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|+|+|+|-.|..+|..|.+.|++|+|+|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3479999999999999999999999999999975
No 347
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.64 E-value=0.012 Score=48.90 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+|+|||+|..|..+|+.|+..|+ +|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999875
No 348
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.64 E-value=0.011 Score=51.62 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|.|||+|..|+.+|..|++ |++|+++|+.+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 45689999999999999999998 999999998763
No 349
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.59 E-value=0.012 Score=51.15 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|+|||.|-.|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 44799999999999999999999999999999753
No 350
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.58 E-value=0.013 Score=48.89 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|+|||+|..|.+.|..|+ .|.+|++++|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 351
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.58 E-value=0.011 Score=48.83 Aligned_cols=35 Identities=14% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+..|.|||+|.-|...|..|+ +|++|+++|+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 3578999999999999999999 9999999998764
No 352
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.58 E-value=0.014 Score=48.53 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45799999999999999999999999999998763
No 353
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.57 E-value=0.015 Score=48.55 Aligned_cols=34 Identities=21% Similarity=0.509 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|.|||+|..|..+|+.|++.|+ +|+++|..+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 4579999999999999999999999 999999873
No 354
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.54 E-value=0.014 Score=49.81 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
.+.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 46789999999999999999999999 999999975
No 355
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.54 E-value=0.014 Score=49.62 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 356
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.49 E-value=0.014 Score=48.79 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=29.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|+|||+|..|...|..|++.|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 457999999999999999999999999999 654
No 357
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.46 E-value=0.015 Score=47.79 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999999864
No 358
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.44 E-value=0.02 Score=44.98 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||+|..|...|..|++.|++|.++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 359
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.42 E-value=0.012 Score=51.54 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|+.+|..|++.|++|+++|+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999865
No 360
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.41 E-value=0.019 Score=47.83 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
.+|+|||+|..|..+|+.|+..|+ +|.++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999875
No 361
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.39 E-value=0.016 Score=51.17 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|..+|..|++.|++|+++|+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 34799999999999999999999999999998763
No 362
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.39 E-value=0.02 Score=47.91 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..+|+|||+|..|.++|+.|+..|+ +|+++|....
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4589999999999999999999999 9999998764
No 363
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.37 E-value=0.017 Score=48.63 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999999865
No 364
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.35 E-value=0.013 Score=48.50 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
..+|.|||.|..|...|..|++.|++|+++|+.+..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 457999999999999999999999999999998753
No 365
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.34 E-value=0.02 Score=45.90 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 356899999999999999999999999999998764
No 366
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.33 E-value=0.02 Score=47.74 Aligned_cols=33 Identities=24% Similarity=0.430 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRL--GIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~~ 92 (294)
+|+|||+|..|..+|..|++. |.+|+++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 699999999999999999985 789999999764
No 367
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.32 E-value=0.019 Score=47.99 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~ 92 (294)
..+|+|||+|-+|..+|+.|+..|+ ++.++|....
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 4689999999999999999999998 8999998753
No 368
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.32 E-value=0.021 Score=48.00 Aligned_cols=35 Identities=17% Similarity=0.110 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLA-TAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~-~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||.|-+|++ +|..|+++|++|.+.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 457999999999996 88999999999999999764
No 369
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.31 E-value=0.016 Score=47.64 Aligned_cols=35 Identities=37% Similarity=0.467 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35689999999999999999999998 899999876
No 370
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.31 E-value=0.019 Score=49.75 Aligned_cols=35 Identities=26% Similarity=0.445 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|||+|.+|+.+|..|...|.+|+++|+...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 371
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.30 E-value=0.02 Score=48.08 Aligned_cols=34 Identities=29% Similarity=0.510 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|+|||+|..|.++|+.|+..|+ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4579999999999999999999998 899999854
No 372
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=95.29 E-value=0.015 Score=47.87 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=31.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999999864
No 373
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.26 E-value=0.013 Score=48.86 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHc-----C-CceEEEec
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL-----G-IGSLVIEQ 89 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~-----G-~~V~vlE~ 89 (294)
.+|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999988
No 374
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.24 E-value=0.02 Score=48.77 Aligned_cols=36 Identities=22% Similarity=0.465 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 56 VRKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 56 ~~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
-.+.+|+|+|||.+|..+|..|...|. +|+++|+..
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 356789999999999999999999999 899999983
No 375
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.21 E-value=0.023 Score=48.86 Aligned_cols=36 Identities=22% Similarity=0.474 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
....|+|+|+|.+|+.++..+...|.+|+++|+...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998764
No 376
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.20 E-value=0.11 Score=45.19 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=30.8
Q ss_pred CCceEeCCceeEEEEcCCceEEEEecCC--CEEEcCEEEecCCCC
Q 022652 171 PESVQFSSELAKIETSGNGVTILELVNG--TRIYANIVIGCDGIR 213 (294)
Q Consensus 171 ~v~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~ 213 (294)
|++++++++|++++ +++ +.+...+| +++.+|.||.|.|..
T Consensus 214 GV~~~~~~~v~~v~--~~~-~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 214 NIDWIANVAVKAIE--PDK-VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCEEECSCEEEEEC--SSE-EEEECTTSCEEEEECSEEEEECEEE
T ss_pred CeEEEeCceEEEEe--CCc-eEEEeeCCCceEeecceEEEeccCC
Confidence 89999999999985 344 32555444 479999999999964
No 377
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.18 E-value=0.0077 Score=43.99 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|||+|..|..+|..|++.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999999875
No 378
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.18 E-value=0.012 Score=46.37 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEE-EecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLV-IEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~v-lE~~~~ 92 (294)
+.+|.|||+|..|...|..|++.|++|++ +++.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 45799999999999999999999999999 887764
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.17 E-value=0.02 Score=47.96 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 345899999999999999999999999999998763
No 380
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.17 E-value=0.028 Score=47.07 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..+|+|||+|..|.++|+.|+..|+ ++.++|....
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4579999999999999999999998 9999998763
No 381
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.16 E-value=0.024 Score=48.25 Aligned_cols=34 Identities=18% Similarity=0.456 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..|+|+|||.-|..+++.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4699999999999999999999999999998754
No 382
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.15 E-value=0.024 Score=47.64 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 5689999999999999999999998 799999876
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.11 E-value=0.029 Score=46.78 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|.++++.+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998764
No 384
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.10 E-value=0.03 Score=46.52 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998763
No 385
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.10 E-value=0.021 Score=47.70 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQA 90 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~ 90 (294)
..+|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999996
No 386
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.08 E-value=0.02 Score=48.09 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQ 89 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~ 89 (294)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 387
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.07 E-value=0.026 Score=47.20 Aligned_cols=34 Identities=26% Similarity=0.551 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|+|||+|..|.++|+.|+..|+ +|.++|...
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999999886 799999875
No 388
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.03 E-value=0.027 Score=49.95 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 34799999999999999999999999999998763
No 389
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.01 E-value=0.024 Score=48.30 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|+|+|.+|..++..|+..|.+|+++++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999999875
No 390
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.99 E-value=0.022 Score=47.17 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 391
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.98 E-value=0.032 Score=46.55 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|.|||.|..|.+.|..|++.|+ +|.++|+.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4679999999999999999999999 999999876
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.94 E-value=0.024 Score=47.42 Aligned_cols=32 Identities=34% Similarity=0.449 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+|+|||+|..|..+|..|++.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 59999999999999999999999 999999875
No 393
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.94 E-value=0.026 Score=46.86 Aligned_cols=35 Identities=23% Similarity=0.518 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~ 92 (294)
..+|+|||||..|..+|+.|+..|+ +|.|+|....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4679999999999999999999999 9999998764
No 394
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.89 E-value=0.025 Score=46.22 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+..|+|.|||..|..++..|.++|++|+++.|.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 35799999999999999999999999999998763
No 395
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.87 E-value=0.019 Score=49.69 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|+.+|..|++ |++|+++|+.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 59999999999999999999 99999999875
No 396
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.85 E-value=0.027 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.465 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 5689999999999999999999998 789999875
No 397
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.84 E-value=0.026 Score=47.16 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G-~~V~vlE~~~ 91 (294)
..+|.|||.|..|..+|..|++.| ++|+++++.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 457999999999999999999999 9999999986
No 398
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.83 E-value=0.038 Score=46.64 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||.|..|.+.|..|.+.|++|.++|+.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999876
No 399
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.77 E-value=0.0089 Score=47.42 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||+|..|.++|..|+++|++|+++++..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 4579999999999999999999999999998853
No 400
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.76 E-value=0.034 Score=46.56 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|.|||+|..|..+|+.|+..|+ ++.++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999854
No 401
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.74 E-value=0.027 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 402
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.74 E-value=0.033 Score=46.57 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|+|||+|-+|.++|+.|+..|+ .+.++|...
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999986 899999764
No 403
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.74 E-value=0.036 Score=47.41 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|+|+|.+|..+|..|+..|.+|+++|+..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999875
No 404
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.73 E-value=0.018 Score=49.23 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999875
No 405
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.73 E-value=0.032 Score=46.15 Aligned_cols=33 Identities=33% Similarity=0.392 Sum_probs=30.9
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVG-AGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIG-aG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.||| +|..|.+.|..|++.|++|.++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999865
No 406
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.72 E-value=0.026 Score=49.95 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~ 91 (294)
.+|.|||+|..|+.+|..|++. |++|+++|+.+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999875
No 407
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.69 E-value=0.035 Score=43.25 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=29.9
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVG-AGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIG-aG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|+||| +|..|...|..|++.|++|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999865
No 408
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.68 E-value=0.028 Score=49.96 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRL--GIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~--G~~V~vlE~~~ 91 (294)
.+|.|||+|..|+.+|..|++. |++|+++|+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 78999999865
No 409
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.68 E-value=0.048 Score=44.56 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..|+|.|+|..|..++..|.++|++|+++.+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999998754
No 410
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.68 E-value=0.032 Score=46.06 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+|+|||+|..|.++|+.|++.|+ +|.++|..+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999876
No 411
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.64 E-value=0.037 Score=46.36 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
...+|+|||+|..|.++|+.|+..|+ ++.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34679999999999999999999998 899999854
No 412
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.64 E-value=0.042 Score=44.35 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC----CceEEEecCCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG----IGSLVIEQADSL 93 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G----~~V~vlE~~~~~ 93 (294)
.+|.|||+|..|...|..|++.| .+|.++++.+..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc
Confidence 47999999999999999999999 799999987643
No 413
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.63 E-value=0.033 Score=46.34 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG--IGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G--~~V~vlE~~~ 91 (294)
.+|+|||+|-.|..+|..|++.| .+|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 36999999999999999999999 6899999875
No 414
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.63 E-value=0.034 Score=47.20 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5689999999999999999999998 899999875
No 415
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.62 E-value=0.038 Score=47.04 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 416
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.60 E-value=0.043 Score=44.75 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...++|+|+|-+|..+|..|++.|.+|++++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999998775
No 417
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=94.59 E-value=0.038 Score=46.08 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~~ 92 (294)
+|+|||+|..|.++|+.|++.|+ ++.++|....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 69999999999999999999998 8999998763
No 418
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.57 E-value=0.039 Score=45.03 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++.|++|.++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998865
No 419
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.56 E-value=0.032 Score=47.81 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG-------IGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G-------~~V~vlE~~~~ 92 (294)
.+|.|||+|..|...|..|++.| ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998765
No 420
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.55 E-value=0.047 Score=44.82 Aligned_cols=33 Identities=24% Similarity=0.290 Sum_probs=30.9
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+ |..|...|..|++.|++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999865
No 421
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.54 E-value=0.043 Score=47.10 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|||+|.+|..+|..|...|.+|+++|+..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 422
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.53 E-value=0.049 Score=44.25 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...++|+|+|-+|-++|+.|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999988864
No 423
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.51 E-value=0.015 Score=46.29 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998764
No 424
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.47 E-value=0.026 Score=49.15 Aligned_cols=34 Identities=24% Similarity=0.525 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
-+..|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4689999999999999999999999999999864
No 425
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.41 E-value=0.05 Score=48.44 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...+|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999998763
No 426
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.40 E-value=0.051 Score=45.59 Aligned_cols=35 Identities=23% Similarity=0.461 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
...+|+|||+|..|.++|+.|+.+|+ ++.|+|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 35689999999999999999999998 899999764
No 427
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.40 E-value=0.041 Score=44.43 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLG-IGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G-~~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++.| ++|.++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999875
No 428
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.38 E-value=0.025 Score=47.94 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLG-------IGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G-------~~V~vlE~~~~ 92 (294)
.+|.|||+|..|...|..|++.| ++|+++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998765
No 429
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.36 E-value=0.04 Score=45.52 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999875
No 430
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.35 E-value=0.043 Score=45.18 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+|.|||+|..|...|..|++.|++|.++++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 589999999999999999999999999998753
No 431
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.33 E-value=0.053 Score=47.99 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+.+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999999864
No 432
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.33 E-value=0.058 Score=45.53 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=30.4
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGA-GIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGa-G~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
..+|+|||+ |.+|.++|+.|+.+|+ +|+++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 457999998 9999999999999996 899999754
No 433
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.31 E-value=0.051 Score=44.41 Aligned_cols=32 Identities=31% Similarity=0.425 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++.|+ +|+++++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899998875
No 434
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.31 E-value=0.044 Score=48.62 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+.+|.|||+|..|..+|..|++.|++|.++++.+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999999875
No 435
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.28 E-value=0.048 Score=50.96 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4699999999999999999999999999998763
No 436
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.27 E-value=0.045 Score=48.21 Aligned_cols=34 Identities=26% Similarity=0.172 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|||||-+|...+..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4679999999999999999999999999999753
No 437
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.26 E-value=0.065 Score=43.87 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC---ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI---GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~---~V~vlE~~~~ 92 (294)
+.+|.|||+|..|.+.|..|.+.|+ +|.++++.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 3579999999999999999999999 9999998763
No 438
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=94.26 E-value=0.061 Score=43.08 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC----ceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGI----GSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~----~V~vlE~~~~ 92 (294)
.+|.|||+|..|...|..|.+.|+ +|.++++.+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999998763
No 439
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=94.25 E-value=0.048 Score=49.32 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4689999999999999999999998 899999876
No 440
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.20 E-value=0.051 Score=44.93 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
...|+|+|+|-+|..+|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4679999999999999999999998 999998875
No 441
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.18 E-value=0.053 Score=43.92 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCc-eEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIG-SLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~-V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++ |.++++..
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 89998865
No 442
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.17 E-value=0.064 Score=45.22 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
..|.|||+|..|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999875
No 443
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.17 E-value=0.055 Score=45.28 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcC----CceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLG----IGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G----~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.| ++|+++++...
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 347999999999999999999999 79999998763
No 444
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.17 E-value=0.056 Score=47.97 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|++.|++|.++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999875
No 445
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=94.17 E-value=0.027 Score=48.75 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH-cCCceEEEe
Q 022652 59 EDIVIVGAGIAGLATAVSLQR-LGIGSLVIE 88 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~-~G~~V~vlE 88 (294)
.+|+|||+|..|...|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999999
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.13 E-value=0.06 Score=42.57 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=31.9
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|.|| |..|..++..|+++|++|+++.|...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 457999998 99999999999999999999998764
No 447
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.09 E-value=0.045 Score=44.86 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++ |++|.++++..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999875
No 448
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.08 E-value=0.067 Score=41.62 Aligned_cols=32 Identities=28% Similarity=0.284 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|+|.|| |..|..++..|+++|++|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999875
No 449
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.07 E-value=0.049 Score=49.17 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999999 899999875
No 450
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=94.03 E-value=0.061 Score=46.93 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 5689999999999999999999999 899999764
No 451
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=93.99 E-value=0.055 Score=45.79 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 5689999999999999999999999 899999775
No 452
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.99 E-value=0.063 Score=47.32 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4679999999999999999999999999999865
No 453
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.94 E-value=0.066 Score=44.71 Aligned_cols=34 Identities=24% Similarity=0.533 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+.+|+|||+|-+|.++|+.|+..++ ++.++|...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4689999999999999999999887 899999854
No 454
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.93 E-value=0.065 Score=44.54 Aligned_cols=33 Identities=42% Similarity=0.543 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
+|+|||+|..|..+|+.|+..|+ ++.++|....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~ 34 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPG 34 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChh
Confidence 48999999999999999999998 6999998753
No 455
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.92 E-value=0.073 Score=43.89 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35679999999999999999999999999999875
No 456
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.92 E-value=0.054 Score=44.27 Aligned_cols=35 Identities=29% Similarity=0.228 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
...++|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4679999999999999999999999 8999998763
No 457
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.92 E-value=0.065 Score=48.58 Aligned_cols=57 Identities=25% Similarity=0.230 Sum_probs=41.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCc-CceEEEcccHHHHHHHcCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTG-GTSLTLFKNGWSVLDALGV 115 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~-g~~~~~~~~~~~~l~~lg~ 115 (294)
.+++|||+|-.|..+|..|.+.|++|+++|+++..... .....-.....+.|++.|+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi 406 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGI 406 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCc
Confidence 68999999999999999999999999999998764321 1222222333455666654
No 458
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.92 E-value=0.05 Score=44.35 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...++|+|+|-+|..+|..|++.|.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999998875
No 459
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.89 E-value=0.075 Score=43.98 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34679999999999999999999999999999875
No 460
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.85 E-value=0.079 Score=43.84 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=32.1
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+..|+|.|| |..|..++..|.++|++|+++.+...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 467999999 99999999999999999999998764
No 461
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.83 E-value=0.044 Score=45.32 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=28.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|-+||-|..|...|..|.+.|++|+++|+.+.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34699999999999999999999999999998764
No 462
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.83 E-value=0.062 Score=43.85 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...|+|||+|-+|.++|..|.+.|.+|+++++..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999999875
No 463
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.81 E-value=0.12 Score=43.58 Aligned_cols=47 Identities=15% Similarity=0.143 Sum_probs=37.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCCCCcCceEEEcccHHHHHHHcCCc
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSLRTGGTSLTLFKNGWSVLDALGVG 116 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~~~~g~~~~~~~~~~~~l~~lg~~ 116 (294)
..-.|+|+|+|..|+.++..+...|.+|+.+++.+.- .+.++++|..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~-------------~~~~~~lGa~ 222 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHK-------------KQDALSMGVK 222 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTT-------------HHHHHHTTCS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHH-------------HHHHHhcCCC
Confidence 3457999999999999999999999999999977643 4566666653
No 464
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.73 E-value=0.081 Score=41.32 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|+|.|| |..|..++..|+++|++|.++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999998 9999999999999999999999875
No 465
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.72 E-value=0.063 Score=50.08 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..+|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 35799999999999999999999999999998763
No 466
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=93.72 E-value=0.07 Score=47.31 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|.|||+|..|...|..|++.|++|.++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999865
No 467
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.65 E-value=0.088 Score=42.39 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
.++|||+|-+|-+++..|.+.|. +|+|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999999 899999875
No 468
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.61 E-value=0.089 Score=44.19 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 57 RKEDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
....|+|.|| |..|..++..|.++|++|+++++...
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 4567999998 99999999999999999999998764
No 469
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.60 E-value=0.065 Score=46.39 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|+|||.|.+|..+|..|...|.+|+++|+.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999865
No 470
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=93.59 E-value=0.044 Score=45.06 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
.+|.|||+|..|...|..|++.|++|++++ .+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 479999999999999999999999999998 543
No 471
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=93.54 E-value=0.064 Score=43.23 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 59 EDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 59 ~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
.+|.|||+|..|...|..|.+.|.+|.++++.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999875
No 472
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=93.53 E-value=0.097 Score=42.98 Aligned_cols=33 Identities=18% Similarity=0.313 Sum_probs=30.6
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 60 DIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 60 dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 5999998 99999999999999999999988764
No 473
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=93.51 E-value=0.095 Score=42.95 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
....++|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 35689999999999999999999999 699998875
No 474
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.47 E-value=0.096 Score=40.16 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..|+|.|| |..|..++..|.++|++|+++.|.+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999998764
No 475
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.47 E-value=0.099 Score=43.52 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
...++|+|+|-+|-++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4679999999999999999999999 899999874
No 476
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=93.45 E-value=0.073 Score=47.18 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
....|+|||+|..|..+|..|...|.+|+++|+.+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999876
No 477
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.40 E-value=0.092 Score=44.01 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
.+.+|+|||+|-+|.++|+.|+..++ .+.++|...
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34689999999999999999999887 799999854
No 478
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.40 E-value=0.074 Score=43.81 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--ceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGI--GSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~--~V~vlE~~~ 91 (294)
+|.|||+|-+|.++|+.|..+++ ++.|+|...
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 69999999999999999999887 799999764
No 479
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.39 E-value=0.098 Score=46.30 Aligned_cols=34 Identities=15% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+.+|.|||+|..|...|..|++.|++|.++++..
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3579999999999999999999999999999875
No 480
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=93.34 E-value=0.072 Score=43.02 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEec
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQ 89 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~ 89 (294)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999876
No 481
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.32 E-value=0.1 Score=42.24 Aligned_cols=32 Identities=31% Similarity=0.466 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 60 DIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
+|+|||+|-+|...|..|.+.|.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999875
No 482
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.30 E-value=0.1 Score=44.41 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQA 90 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~ 90 (294)
....|+|+|.|-.|..+|..|.+.|.+|++.|+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999999999999999999999999864
No 483
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.28 E-value=0.14 Score=43.48 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|+|+|..|+.++..+...|.+|+.+++.+.
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999988889999999998764
No 484
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.26 E-value=0.074 Score=41.67 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.2
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 59 EDIVIVGA-GIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGa-G~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
..|+|.|| |..|..++..|.++|++|.++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 57999996 99999999999999999999999864
No 485
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.24 E-value=0.11 Score=44.47 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADSL 93 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~~ 93 (294)
....++|+|||..|..+|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 4568999999999999999999999999999987654
No 486
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.20 E-value=0.12 Score=42.18 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35679999999999999999999997 899998865
No 487
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.15 E-value=0.082 Score=48.26 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 4689999999999999999999998 899999875
No 488
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.15 E-value=0.1 Score=42.75 Aligned_cols=35 Identities=20% Similarity=0.169 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
....++|+|+|-+|-++++.|++.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35689999999999999999999998 899998775
No 489
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.13 E-value=0.085 Score=43.87 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=31.5
Q ss_pred CCCcEEEECCC-HHHHHHHHHHHHcCCceEEEecCC
Q 022652 57 RKEDIVIVGAG-IAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG-~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...+|+|||+| .+|-.+|..|...|..|+++++..
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 45789999999 689999999999999999998874
No 490
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.10 E-value=0.15 Score=39.79 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=30.2
Q ss_pred CcEEEECC-CHHHHHHHHHHH-HcCCceEEEecCCC
Q 022652 59 EDIVIVGA-GIAGLATAVSLQ-RLGIGSLVIEQADS 92 (294)
Q Consensus 59 ~dvvIIGa-G~aGl~~A~~L~-~~G~~V~vlE~~~~ 92 (294)
..|+|.|| |-.|..++..|+ +.|++|+++.|...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 34999995 999999999999 89999999998754
No 491
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.08 E-value=0.12 Score=44.29 Aligned_cols=36 Identities=25% Similarity=0.368 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQADS 92 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~~ 92 (294)
..-.|+|+|+|..|+.++..+...|. +|++++..+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~ 229 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHH
Confidence 34579999999999999999999999 8999987764
No 492
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=93.08 E-value=0.13 Score=43.36 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|.|||.|..|..+|..|+..|++|+++++...
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 45799999999999999999999999999998763
No 493
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=92.99 E-value=0.081 Score=43.46 Aligned_cols=33 Identities=30% Similarity=0.383 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQAD 91 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~ 91 (294)
...++|+|+|-+|.++|..|++.| +|++++|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 457999999999999999999999 999998764
No 494
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.99 E-value=0.12 Score=42.34 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
....++|+|+|-+|-+++..|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 35679999999999999999999997 899998875
No 495
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.98 E-value=0.18 Score=44.73 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=42.7
Q ss_pred HHHHHHHHhcCCCCceEeCCceeEEEEcCCceEEEEecCCC----EEEcCEEEecCCCC
Q 022652 159 RILLETLANQLPPESVQFSSELAKIETSGNGVTILELVNGT----RIYANIVIGCDGIR 213 (294)
Q Consensus 159 ~~l~~~L~~~~~~v~i~~~~~v~~i~~~~~~~~~v~~~~g~----~~~ad~vV~A~G~~ 213 (294)
..+.+.|.+.+.. +|+++++|++|..++++ +.|.+.+|+ ++.||.||.|.+..
T Consensus 241 ~~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~-v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 241 DKLPTAMYRDIQD-KVHFNAQVIKIQQNDQK-VTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp THHHHHHHHHTGG-GEESSCEEEEEEECSSC-EEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhccc-ccccCCEEEEEEECCCe-EEEEEecCCcccceEEeCEEEECCChH
Confidence 4677778777744 89999999999988777 557777664 48999999999965
No 496
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.96 E-value=0.14 Score=44.00 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|+|||+|..|..++..+.+.|++|++++..+.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 45799999999999999999999999999997653
No 497
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.95 E-value=0.14 Score=43.72 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|.|||+|..|..++..+.+.|++|+++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46799999999999999999999999999998653
No 498
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.95 E-value=0.11 Score=45.00 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEecCC
Q 022652 57 RKEDIVIVGAGIAGLATAVSLQRLGI-GSLVIEQAD 91 (294)
Q Consensus 57 ~~~dvvIIGaG~aGl~~A~~L~~~G~-~V~vlE~~~ 91 (294)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45679999999999999999999999 899998875
No 499
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.93 E-value=0.091 Score=43.80 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHHcC--CceEEEecCC
Q 022652 60 DIVIVGA-GIAGLATAVSLQRLG--IGSLVIEQAD 91 (294)
Q Consensus 60 dvvIIGa-G~aGl~~A~~L~~~G--~~V~vlE~~~ 91 (294)
+|+|||| |.+|..+|+.|+..| .++.++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 6999998 999999999999988 5899999875
No 500
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=92.92 E-value=0.11 Score=48.63 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHcCCceEEEecCCC
Q 022652 58 KEDIVIVGAGIAGLATAVSLQRLGIGSLVIEQADS 92 (294)
Q Consensus 58 ~~dvvIIGaG~aGl~~A~~L~~~G~~V~vlE~~~~ 92 (294)
...|.|||||.-|...|+.+++.|++|+++|..+.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 35899999999999999999999999999998764
Done!