BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022654
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q56X52|AOX4_ARATH Ubiquinol oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis
thaliana GN=AOX4 PE=1 SV=2
Length = 351
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/232 (75%), Positives = 199/232 (85%), Gaps = 4/232 (1%)
Query: 45 NFCRVQATILQDEEEKVVVEES----SPLKNFPNDDEPPETGSASALEKWVIKFEQSVNI 100
N RVQATILQD+EEKVVVEES + P ++ + S SA E W+IK EQ VN+
Sbjct: 51 NNHRVQATILQDDEEKVVVEESFKAETSTGTEPLEEPNMSSSSTSAFETWIIKLEQGVNV 110
Query: 101 LLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFA 160
LT+SVI +LD LYRDR YARFFVLETIARVPYFAF+SVLHMYE+FGWWRRADYLKVHFA
Sbjct: 111 FLTDSVIKILDTLYRDRTYARFFVLETIARVPYFAFMSVLHMYETFGWWRRADYLKVHFA 170
Query: 161 ESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHA 220
ESWNEMHHLLIMEELGGN+WWFDRFLAQHIA YYF+TVF+Y++SPRMAYHFSECVESHA
Sbjct: 171 ESWNEMHHLLIMEELGGNSWWFDRFLAQHIATFYYFMTVFLYILSPRMAYHFSECVESHA 230
Query: 221 FETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKI 272
+ETYDKF+KA GE+LK MPAP +A+KYYTGGDLYLFDEFQT+R PN+RRP I
Sbjct: 231 YETYDKFLKASGEELKNMPAPDIAVKYYTGGDLYLFDEFQTSRTPNTRRPVI 282
>sp|Q41266|AOX2_SOYBN Ubiquinol oxidase 2, mitochondrial OS=Glycine max GN=AOX2 PE=1 SV=2
Length = 333
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH+ + + ++K E+ NE HL+
Sbjct: 147 DLFFKRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLM 206
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK- 229
M EL W++R L + ++ +Y++SP++A+ +E A +Y +++K
Sbjct: 207 TMVELVKPK-WYERLLVLAVQGVFFNAFFVLYILSPKVAHRIVGYLEEEAIHSYTEYLKD 265
Query: 230 AQGEKLKKMPAPAVAIKYY 248
+ ++ +PAPA+AI Y+
Sbjct: 266 LESGAIENVPAPAIAIDYW 284
>sp|Q40294|AOX1_MANIN Ubiquinol oxidase, mitochondrial OS=Mangifera indica GN=AOMI 1 PE=1
SV=2
Length = 318
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH+ + ++K E+ NE HL+
Sbjct: 132 DIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKLEQSGGWIKALLEEAENERMHLM 191
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK- 229
M EL W++R L + ++ +YV+SP++A+ +E A +Y +++K
Sbjct: 192 TMVEL-VQPKWYERLLVLAVQGVFFNSFFVLYVLSPKLAHRIVGYLEEEAIHSYTEYLKD 250
Query: 230 AQGEKLKKMPAPAVAIKYY 248
+K +PAPA+AI Y+
Sbjct: 251 IDSGAIKNIPAPAIAIDYW 269
>sp|O22049|AOX2_ARATH Ubiquinol oxidase 2, mitochondrial OS=Arabidopsis thaliana GN=AOX2
PE=1 SV=2
Length = 353
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH+ + ++K E+ NE HL+
Sbjct: 167 DIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSIRKFEHSGGWIKALLEEAENERMHLM 226
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK- 229
M EL W++R L + ++ YVISPR+A+ +E A +Y +F+K
Sbjct: 227 TMMELV-KPKWYERLLVMLVQGIFFNSFFVCYVISPRLAHRVVGYLEEEAIHSYTEFLKD 285
Query: 230 AQGEKLKKMPAPAVAIKYY 248
K++ + APA+AI Y+
Sbjct: 286 IDNGKIENVAAPAIAIDYW 304
>sp|Q40578|AOX2_TOBAC Ubiquinol oxidase 2, mitochondrial OS=Nicotiana tabacum GN=AOX2
PE=1 SV=2
Length = 297
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH + + ++K E+ NE HL+
Sbjct: 111 DIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLM 170
Query: 171 IMEELGGNAWWFDR---FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKF 227
E+ W++R F Q + + YFVT Y++SP++A+ +E A +Y +F
Sbjct: 171 TFMEVAKPN-WYERALVFAVQGVFINAYFVT---YLLSPKLAHRIVGYLEEEAIHSYTEF 226
Query: 228 IKAQGE-KLKKMPAPAVAIKYY 248
+K + ++ +PAPA+AI Y+
Sbjct: 227 LKELDKGNIENVPAPAIAIDYW 248
>sp|O03376|AOX3_SOYBN Alternative oxidase 3, mitochondrial OS=Glycine max GN=AOX3 PE=1
SV=1
Length = 326
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D +++R +LETIA VP +LH+ + ++K E+ NE HL+
Sbjct: 140 DIYFKERYGCHAMMLETIAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLM 199
Query: 171 IMEELGGNAWWFDRFL---AQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKF 227
M EL + W +R L AQ + +FV Y++SP+ A+ F +E A +Y +
Sbjct: 200 TMVELVKPS-WHERLLIFTAQGVFFNAFFV---FYLLSPKAAHRFVGYLEEEAVISYTQH 255
Query: 228 IKA-QGEKLKKMPAPAVAIKYY 248
+ A + K++ +PAPA+AI Y+
Sbjct: 256 LNAIESGKVENVPAPAIAIDYW 277
>sp|Q8LEE7|AOX3_ARATH Ubiquinol oxidase 3, mitochondrial OS=Arabidopsis thaliana GN=AOX3
PE=2 SV=2
Length = 318
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 104 ESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESW 163
+++ + + ++ + +LET+A VP +LH+ + ++K E+
Sbjct: 125 QTLKIPVQLFFQRKHMCHAMLLETVAAVPGMVGGMLLHLKSLRRFEHSGGWIKALLEEAE 184
Query: 164 NEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFET 223
NE HL+ EL W++R + + ++ YVISP++A+ + +E A +
Sbjct: 185 NERMHLMTFIELS-QPKWYERAIVFTVQGVFFNAYFLAYVISPKLAHRITGYLEEEAVNS 243
Query: 224 YDKFIK-AQGEKLKKMPAPAVAIKYY 248
Y +F+K K + PAPA+AI Y+
Sbjct: 244 YTEFLKDIDAGKFENSPAPAIAIDYW 269
>sp|Q41224|AOX1_TOBAC Ubiquinol oxidase 1, mitochondrial OS=Nicotiana tabacum GN=AOX1
PE=1 SV=1
Length = 353
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH + + ++K E+ NE HL+
Sbjct: 167 DIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKTLLDEAENERMHLM 226
Query: 171 IMEELGGNAWWFDR---FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKF 227
E+ W++R F Q + YFVT Y++SP++A+ +E A +Y +F
Sbjct: 227 TFMEVA-KPNWYERALVFAVQGVFFNAYFVT---YLLSPKLAHRIVGYLEEEAIHSYTEF 282
Query: 228 IKAQGE-KLKKMPAPAVAIKY 247
+K + ++ +PAPA+AI Y
Sbjct: 283 LKELDKGNIENVPAPAIAIDY 303
>sp|O22048|AOX1C_ARATH Ubiquinol oxidase 1c, mitochondrial OS=Arabidopsis thaliana
GN=AOX1C PE=1 SV=1
Length = 329
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP ++H + + ++K E+ NE HL+
Sbjct: 143 DLFFQRRYGCRAIMLETVAAVPGMVGGMLMHFKSLRRFEQSGGWIKALLEEAENERMHLM 202
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKA 230
E+ W ++R L + ++ + Y+ISP+ A+ +E A +Y +F+K
Sbjct: 203 TFMEVAKPKW-YERALVISVQGVFFNAYLIGYIISPKFAHRMVGYLEEEAIHSYTEFLKE 261
Query: 231 -QGEKLKKMPAPAVAIKYY 248
++ +PAPA+A+ Y+
Sbjct: 262 LDNGNIENVPAPAIAVDYW 280
>sp|Q39219|AOX1A_ARATH Ubiquinol oxidase 1a, mitochondrial OS=Arabidopsis thaliana
GN=AOX1A PE=1 SV=2
Length = 354
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP +LH + + ++K E+ NE HL+
Sbjct: 168 DLFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLM 227
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKA 230
E+ W++R L + ++ Y+ISP+ A+ +E A +Y +F+K
Sbjct: 228 TFMEVAKPK-WYERALVITVQGVFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE 286
Query: 231 -QGEKLKKMPAPAVAIKYY 248
++ +PAPA+AI Y+
Sbjct: 287 LDKGNIENVPAPAIAIDYW 305
>sp|Q8NKE2|AOX_CRYNH Alternative oxidase, mitochondrial OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=AOX1 PE=3 SV=2
Length = 401
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
R +LE+IA VP ++ H+ R ++ E+ NE HLL +
Sbjct: 186 RIILLESIAGVPGMVGGTLRHLRSMRLLKRDGGWIHSLLEEAENERMHLLTFMTIA-QPG 244
Query: 181 WFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGEKL----K 236
F R L +Y Y+ISPR+A+ F +E A TY I L K
Sbjct: 245 IFTRALVLAAQGVFYNAFFLTYLISPRIAHRFVGALEEEAVRTYTHCISDMEAGLIPEWK 304
Query: 237 KMPAPAVAIKYY 248
MPAPA+AI Y+
Sbjct: 305 DMPAPAIAIDYW 316
>sp|O23913|AOX1B_ARATH Ubiquinol oxidase 1b, mitochondrial OS=Arabidopsis thaliana
GN=AOX1B PE=1 SV=1
Length = 325
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D ++ R R +LET+A VP ++H + + ++K E+ NE HL+
Sbjct: 139 DLFFQRRYGCRAMMLETVAAVPGMVGGMLVHCKSLRRFEQSGGWIKALLEEAENERMHLM 198
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKA 230
E+ W ++R L + ++ Y+ISP+ A+ +E A +Y +F+K
Sbjct: 199 TFMEVAKPNW-YERALVIAVQGIFFNAYFLGYLISPKFAHRMVGYLEEEAIHSYTEFLKE 257
Query: 231 -QGEKLKKMPAPAVAIKYY 248
++ +PAPA+AI Y+
Sbjct: 258 LDNGNIENVPAPAIAIDYW 276
>sp|P22185|AOX1_TYPVN Ubiquinol oxidase 1, mitochondrial OS=Typhonium venosum GN=AOX1
PE=1 SV=1
Length = 349
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHM-----YESFGWWRRADYLKVHFAESWNE 165
D ++ R R +LET+A VP +LH+ +E G W RA E+ NE
Sbjct: 163 DIFFQRRYACRAMMLETVAAVPGMVGGVLLHLKSLRRFEHSGGWIRA-----LLEEAENE 217
Query: 166 MHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYD 225
HL+ E+ W++R L + ++ Y++SP+ A+ +E A +Y
Sbjct: 218 RMHLMTFMEV-AQPRWYERALVLAVQGVFFNAYFLGYLLSPKFAHRVVGYLEEEAIHSYT 276
Query: 226 KFIK-AQGEKLKKMPAPAVAIKYY 248
+F+K ++ PAPA+A+ Y+
Sbjct: 277 EFLKDIDSGAIQDCPAPAIALDYW 300
>sp|Q07185|AOX1_SOYBN Ubiquinol oxidase 1, mitochondrial OS=Glycine max GN=AOX1 PE=1 SV=1
Length = 321
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHM-----YESFGWWRRADYLKVHFAESWNE 165
D ++ R R +LET+A VP +LH +E G W K E+ NE
Sbjct: 135 DVFFQRRYGCRAMMLETVAAVPGMVAGMLLHCKSLRRFEHSGGW-----FKALLEEAENE 189
Query: 166 MHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYD 225
HL+ E+ W++R L + ++ Y++SP+ A+ +E A +Y
Sbjct: 190 RMHLMTFMEV-AKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMFGYLEEEAIHSYT 248
Query: 226 KFIKAQGE-KLKKMPAPAVAIKYY 248
+F+K + ++ +PAPA+AI Y+
Sbjct: 249 EFLKELDKGNIENVPAPAIAIDYW 272
>sp|Q9C206|AOX_PODAS Alternative oxidase, mitochondrial OS=Podospora anserina GN=AOX1
PE=3 SV=1
Length = 363
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 92 IKFEQSVNILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRR 151
IK EQ V+ + + L + RF LE+IA VP + H+ R
Sbjct: 131 IKPEQQVDKSNPTTAVAAQKPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLESLRRLKRD 190
Query: 152 ADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFM-YVISPRMAY 210
+++ ES+NE HLL ++ W+ + A +F +F+ Y+ISPR+ +
Sbjct: 191 NGWIETLLEESYNERMHLLTFMKMCEPGWFMKTMILG--AQGVFFNAMFLSYLISPRITH 248
Query: 211 HFSECVESHAFETYDKFIK--AQGEKLK----KMPAPAVAIKYY 248
F +E A TY + I+ QG+ K P +A+ Y+
Sbjct: 249 RFVGYLEEEAVHTYTRCIREIEQGDLPKWSDPNFQIPDLAVTYW 292
>sp|Q9P959|AOX_EMENI Alternative oxidase, mitochondrial OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=alxA PE=3 SV=2
Length = 354
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLI---MEELGG 177
RF LE++A VP + H+ R +++ E++NE HLL M E G
Sbjct: 152 RFVFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKMAEPG- 210
Query: 178 NAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK----AQGE 233
WF R + ++ Y+ISPR + F +E A TY + IK +
Sbjct: 211 ---WFMRLMVLGAQGVFFNGFFLSYLISPRTCHRFVGYLEEEAVLTYTRAIKDLESGRLP 267
Query: 234 KLKKMPAPAVAIKYY 248
+K+ AP +A+KY+
Sbjct: 268 HWEKLEAPEIAVKYW 282
>sp|O93853|AOX1_CANAX Alternative oxidase 1, mitochondrial OS=Candida albicans GN=AOX1
PE=3 SV=1
Length = 379
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 120 ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 179
R LE+IA VP V H++ R +++ E++NE HLL ++G +
Sbjct: 174 TRCIFLESIAGVPGSVAGFVRHLHSLRMLTRDKAWIETLHDEAYNERMHLLTFIKIGKPS 233
Query: 180 WWFDR---FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGE--- 233
WF R ++ Q + +F+ +Y+++PR + F +E A TY I +
Sbjct: 234 -WFTRSIIYIGQGVFTNIFFL---VYLMNPRYCHRFVGYLEEEAVRTYTHLIDELDDPNK 289
Query: 234 --KLKKMPAPAVAIKYY 248
+K+P P +A++Y+
Sbjct: 290 LPDFQKLPIPNIAVQYW 306
>sp|O93788|AOX_MAGO7 Alternative oxidase, mitochondrial OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=AOX1 PE=2 SV=1
Length = 377
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 95 EQSVNILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADY 154
+Q +N + I+ L + +RF LE+IA VP + H++ R +
Sbjct: 125 QQQINKGSPTTSIVAAKPLTEAQWLSRFIFLESIAAVPGMVAGMLRHLHSLRRLKRDNGW 184
Query: 155 LKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFM-YVISPRMAYHFS 213
++ E++NE HLL ++ W + A YF +F+ Y+ISP++ + F
Sbjct: 185 IETLLEEAYNERMHLLTFLKMCEPGWLMKILIIG--AQGVYFNAMFVAYLISPKICHRFV 242
Query: 214 ECVESHAFETYDKFIK--AQGEKLK----KMPAPAVAIKYY 248
+E A TY + I+ +G+ K K P +A+ Y+
Sbjct: 243 GYLEEEAVHTYTRSIEELERGDLPKWSDPKFQVPEIAVSYW 283
>sp|Q9Y711|AOX_AJECA Alternative oxidase, mitochondrial OS=Ajellomyces capsulatus
GN=AOX1 PE=2 SV=1
Length = 356
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
RF LET+A VP + H+ R +++ E++NE HLL +L
Sbjct: 154 RFIFLETVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLSFLKLAQPG- 212
Query: 181 WFDRFL---AQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK-AQGEKL- 235
WF R + AQ + +F++ Y+ISPR + F +E A TY IK + KL
Sbjct: 213 WFMRLMVLGAQGVFFNGFFIS---YLISPRTCHRFVGYLEEEAVMTYTHAIKDLESGKLP 269
Query: 236 --KKMPAPAVAIKYY 248
PAP +A+ Y+
Sbjct: 270 NWANQPAPDIAVAYW 284
>sp|Q9P429|AOX_VENIN Alternative oxidase, mitochondrial OS=Venturia inaequalis GN=AOX1
PE=3 SV=1
Length = 361
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
R LE++A VP + H++ R +++ ES+NE HLLI +L W
Sbjct: 159 RNVFLESVAGVPGMVAGMLRHLHSMRRMKRDHGWIETLLEESYNERMHLLIFLKLYEPGW 218
Query: 181 WFDRFLAQHIAVAYYFVTVFM-YVISPRMAYHFSECVESHAFETYDK-FIKAQGEKL--- 235
+ LA A +F +F+ Y+ISPR + F +E A TY + + KL
Sbjct: 219 FMR--LAVLGAQGVFFNAMFLSYLISPRTCHRFVGYLEEEAVVTYTRELADLEAGKLPEW 276
Query: 236 KKMPAPAVAIKYYT 249
+ + AP +A+ YY
Sbjct: 277 ETLAAPDIAVDYYN 290
>sp|Q00912|AOX_HANAN Alternative oxidase, mitochondrial OS=Hansenula anomala GN=AOX1
PE=1 SV=1
Length = 342
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 120 ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 179
R LE++A VP + H++ R +++ E++NE HLL ++ GN
Sbjct: 136 TRCIFLESVAGVPGMVAAFIRHLHSLRLLKRDKAWIETLLDEAYNERMHLLTFIKI-GNP 194
Query: 180 WWFDRF---LAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK 229
WF RF + Q + +F+ +Y+I PR + F +E A TY IK
Sbjct: 195 SWFTRFIIYMGQGVFANLFFL---VYLIKPRYCHRFVGYLEEEAVSTYTHLIK 244
>sp|O74180|AOX_ASPNG Alternative oxidase, mitochondrial OS=Aspergillus niger GN=aox1
PE=2 SV=2
Length = 351
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
RF LE++A VP + H+ R +++ E++NE HLL +L
Sbjct: 149 RFIFLESVAGVPGMVGGMLRHLRSLRRMKRDNGWIETLLEEAYNERMHLLTFLKLAEPG- 207
Query: 181 WFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK----AQGEKLK 236
WF R + ++ Y++SPR+ + F +E A TY + IK +
Sbjct: 208 WFMRLMVLGAQGVFFNGFFLSYLMSPRICHRFVGYLEEEAVITYTRAIKEIEAGSLPAWE 267
Query: 237 KMPAPAVAIKYY 248
K AP +A++Y+
Sbjct: 268 KTEAPEIAVQYW 279
>sp|D5JAJ1|AOX_TRAHO Ubiquinol oxidase OS=Trachipleistophora hominis GN=AOX PE=1 SV=1
Length = 318
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 113 LYRDRDYAR-FFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLI 171
LY +DY R VLET+A +P H+Y + +K E+ NE HLL
Sbjct: 140 LYFQKDYVRRVVVLETVAAIPGMVGGMFRHLYSLRNLEDNGEAIKKLVLEAENERQHLLT 199
Query: 172 -MEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKF 227
+ L N DR L + ++ + Y ++PR A+ F +E A +YD F
Sbjct: 200 FLAVLKPNV--LDRMLIKLGQFLFFNGYMVFYFVAPRTAHRFVGYLEEEAVRSYDAF 254
>sp|Q9UV71|AOX2_CANAX Alternative oxidase 2, mitochondrial OS=Candida albicans GN=AOX2
PE=3 SV=1
Length = 365
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 120 ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 179
R LE++A VP + H++ R +++ E++NE HLL ++G +
Sbjct: 160 TRCIFLESVAGVPGSVAGFLRHLHSLRMLRRDKAWIETLLDEAYNERMHLLTFIKIGKPS 219
Query: 180 WWFDR---FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKF-----IKAQ 231
WF R ++ Q + +F+ +Y+++PR + F +E A TY + +
Sbjct: 220 -WFTRSIIYVGQGVFTNVFFL---LYLLNPRYCHRFVGYLEEEAVRTYSHLLDELAVPGK 275
Query: 232 GEKLKKMPAPAVAIKYY 248
+ M P VA++Y+
Sbjct: 276 LPAFETMKIPEVAVQYW 292
>sp|Q8X1N9|AOX_BLUGR Alternative oxidase, mitochondrial OS=Blumeria graminis PE=3 SV=1
Length = 358
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 100 ILLTESVIMVLDALYR--DRDY-ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLK 156
+ +TE+ VL YR +R + R LE++A VP + H++ R +++
Sbjct: 130 VTITENGEKVLKKPYRMSERKWLIRMVFLESVAGVPGMVAGMLRHLHSLRRLKRDNGWIE 189
Query: 157 VHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFM-YVISPRMAYHFSEC 215
E++NE HLL ++ W F +F+ A +F ++F+ Y+ISPR + F
Sbjct: 190 TLLEEAYNERMHLLTFLKMAKPGW-FMKFMIIG-AQGVFFNSMFLSYLISPRTCHRFVAY 247
Query: 216 VESHAFETYDKFIK 229
+E A TY I+
Sbjct: 248 LEEEAVLTYSTAIQ 261
>sp|Q01355|AOX_NEUCR Alternative oxidase, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=aod-1 PE=1 SV=1
Length = 362
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 92 IKFEQSVNILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRR 151
I+ EQ V+ + L + RF LE+IA VP + H++ R
Sbjct: 129 IRPEQQVDKHHPTTATSADKPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLKRD 188
Query: 152 ADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFM-YVISPRMAY 210
+++ ES+NE HLL ++ + A +F +F+ Y+ISP++ +
Sbjct: 189 NGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILG--AQGVFFNAMFLSYLISPKITH 246
Query: 211 HFSECVESHAFETYDKFIK--AQGEKLK----KMPAPAVAIKYY 248
F +E A TY + I+ +G K K P +A++Y+
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWSDEKFEIPEMAVRYW 290
>sp|Q8J1Z2|AOX_GELSS Alternative oxidase, mitochondrial OS=Gelasinospora sp. (strain
S23) GN=aod-1 PE=3 SV=1
Length = 362
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 92 IKFEQSVNILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRR 151
I+ EQ V+ + L + RF LE+IA VP + H++ R
Sbjct: 129 IRPEQQVDKNHPTTATSADKPLTEAQWLVRFIFLESIAGVPGMVAGMLRHLHSLRRLKRD 188
Query: 152 ADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVAYYFVTVFM-YVISPRMAY 210
+++ ES+NE HLL ++ + A +F +F+ Y++SP++ +
Sbjct: 189 NGWIETLLEESYNERMHLLTFMKMCEPGLLMKTLILG--AQGVFFNAMFLSYLVSPKITH 246
Query: 211 HFSECVESHAFETYDKFIK--AQGEKLK----KMPAPAVAIKYY 248
F +E A TY + I+ +G K + P +A++Y+
Sbjct: 247 RFVGYLEEEAVHTYTRCIREIEEGHLPKWSDERFEIPEMAVRYW 290
>sp|Q9P414|AOX_PICST Alternative oxidase, mitochondrial OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=STO1 PE=3 SV=2
Length = 357
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 120 ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 179
R LE+IA VP + H++ R +++ E++NE HLL ++G +
Sbjct: 153 TRCIFLESIAGVPGAVASFIRHLHSLRLLKRDKAWIETLLDEAFNERMHLLTFIKIGKPS 212
Query: 180 WWFDR---FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFI-KAQGEKL 235
WF R ++ Q + +F+ Y+ +P+ + F +E A TY F+ + Q KL
Sbjct: 213 -WFTRTIIYVGQGVFCNLFFL---FYLANPKYCHRFVGYLEEEAVSTYTHFVHELQSGKL 268
Query: 236 KK---MPAPAVAIKYY 248
K + P +A +Y+
Sbjct: 269 PKFENIKIPTIAWQYW 284
>sp|F4P6T0|AOX_BATDJ Ubiquinol oxidase, mitochondrial OS=Batrachochytrium dendrobatidis
(strain JAM81 / FGSC 10211) GN=AOX PE=3 SV=1
Length = 316
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 111 DALYRDRDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLL 170
D +R + R VLET+A VP + H+ ++ +E+ NE HLL
Sbjct: 116 DLFFRKQYVHRAVVLETVAAVPGMVAGMLRHLTSLRLMRHDGGWISHLLSEAENERLHLL 175
Query: 171 IMEELGGNAWWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFI-K 229
++ + F+R L + ++ V Y++ P+ A+ +E A +Y F+ +
Sbjct: 176 TWMKVCQPS-LFERMLVALVQTLFFNVYFLAYMLFPKTAHRMVGYLEEEAIISYTHFLAE 234
Query: 230 AQGEKLKKMPAPAVAIKYYT 249
+ PAP +AI Y+
Sbjct: 235 IDAGNIPNGPAPKLAIDYWN 254
>sp|Q26710|AOX_TRYBB Alternative oxidase, mitochondrial OS=Trypanosoma brucei brucei
GN=AOX PE=1 SV=2
Length = 329
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Query: 120 ARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNA 179
+R LET+A VP + H+ R ++ E+ NE HL+ EL
Sbjct: 117 SRCLFLETVAGVPGMVGGMLRHLSSLRYMTRDKGWINTLLVEAENERMHLMTFIELRQPG 176
Query: 180 WWFDRFLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGE---KLK 236
+ A+ Y F+ V YVISPR + F +E A TY ++A E +
Sbjct: 177 LPLRVSIIITQAIMYLFLLV-AYVISPRFVHRFVGYLEEEAVITYTGVMRAIDEGRLRPT 235
Query: 237 KMPAPAVAIKYY 248
K P VA Y+
Sbjct: 236 KNDVPEVARVYW 247
>sp|Q8J0I8|AOX_YARLI Alternative oxidase, mitochondrial OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=AOX PE=3 SV=1
Length = 353
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
RF LE+IA VP + H++ R +++ E++NE HLL +L +
Sbjct: 152 RFLFLESIAGVPGMVAGMIRHLHSLRALRRDRAWIESLVEEAYNERMHLLTFLKLQKPSV 211
Query: 181 WFDR--FLAQHIAVAYYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIK----AQGEK 234
+ Q I +F++ Y+ISP + F +E A TY + ++ + +
Sbjct: 212 QMRTGLLIGQIIFYNLFFIS---YLISPATCHRFVGYLEEEAVITYTRCLEDIDAGRLPE 268
Query: 235 LKKMPAPAVAIKY-YTGGDLYLFDEFQTARLPNSRRPKI 272
L M P +A Y + D + D Q R ++ ++
Sbjct: 269 LASMEVPDIARTYWHMEDDCTMRDLIQYVRADEAKHCEV 307
>sp|Q8NJ59|AOX_BOTFU Alternative oxidase, mitochondrial OS=Botryotinia fuckeliana GN=aox
PE=2 SV=1
Length = 361
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
R+ LE++A VP + H+ G R +++ E++NE HLL ++
Sbjct: 157 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGI 216
Query: 181 WFDRFLAQHIAVAYYFVTVFM-YVISPRMAYHFSECVESHAFETYDKFIKA-QGEKLKK- 237
+ + A +F + F+ Y+ SPR + F +E A TY I+ + L K
Sbjct: 217 FMRTMILG--AQGVFFNSFFLCYLFSPRTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKW 274
Query: 238 ----MPAPAVAIKYY 248
AP +A++Y+
Sbjct: 275 ADPDFKAPDLAVEYW 289
>sp|Q96UR9|AOX_MONFR Alternative oxidase, mitochondrial OS=Monilinia fructicola GN=AOX1
PE=3 SV=1
Length = 358
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 121 RFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAW 180
R+ LE++A VP + H+ G R +++ E++NE HLL ++
Sbjct: 154 RYVFLESVAGVPGMVAGMLRHLRSLRGLKRDNGWIETLLEEAYNERMHLLTFLKMYEPGL 213
Query: 181 WFDRFLAQHIAVAYYFVTVFM-YVISPRMAYHFSECVESHAFETYDKFIKA-QGEKLKK- 237
+ + A +F + F+ Y+ SP+ + F +E A TY I+ + L K
Sbjct: 214 FMRTMILG--AQGVFFNSFFLCYLFSPKTCHRFVGYLEEEAVLTYTLSIQDLENGHLPKW 271
Query: 238 ----MPAPAVAIKYY 248
AP +AI+Y+
Sbjct: 272 ADPNFKAPDLAIEYW 286
>sp|P29994|ITPR1_RAT Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus
GN=Itpr1 PE=1 SV=2
Length = 2750
Score = 34.7 bits (78), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 190 IAVAYYFVTVFMYV--ISPRMAYHFSECVESHAFET-YDKF----IKAQGEKLKKMPAPA 242
+ + + F+ F I+ R+ HF C+E+H Y KF +KA+G+ +KK
Sbjct: 1271 VTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMV 1330
Query: 243 VAIKYYTGGDLYLF----DEFQT-ARLPNSRRPKIGKERVLFL 280
+A +G D+ +F FQT ++ S R ++ + LF+
Sbjct: 1331 MAELVNSGEDVLVFYNDRASFQTLIQMMRSERDRMDENSPLFM 1373
>sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens GN=ITPR1
PE=1 SV=2
Length = 2758
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 190 IAVAYYFVTVFMYV--ISPRMAYHFSECVESHAFET-YDKF----IKAQGEKLKKMPAPA 242
+ + + F+ F I+ R+ HF C+E+H Y KF +KA+G+ +KK
Sbjct: 1281 VTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMV 1340
Query: 243 VAIKYYTGGDLYLF 256
+A +G D+ +F
Sbjct: 1341 MAELVNSGEDVLVF 1354
>sp|P11881|ITPR1_MOUSE Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus GN=Itpr1
PE=1 SV=2
Length = 2749
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 190 IAVAYYFVTVFMYV--ISPRMAYHFSECVESHAFET-YDKF----IKAQGEKLKKMPAPA 242
+ + + F+ F I+ R+ HF C+E+H Y KF +KA+G+ +KK
Sbjct: 1271 VTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMV 1330
Query: 243 VAIKYYTGGDLYLF 256
+A +G D+ +F
Sbjct: 1331 MAELVNSGEDVLVF 1344
>sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type 1 OS=Bos taurus GN=ITPR1
PE=1 SV=1
Length = 2709
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 190 IAVAYYFVTVFMYV--ISPRMAYHFSECVESHAFET-YDKF----IKAQGEKLKKMPAPA 242
+ + + F+ F I+ R+ HF C+E+H Y KF +KA+G+ +KK
Sbjct: 1271 VTMQHIFMNNFQLCSEINERVVQHFVHCIETHGRNVQYIKFLQTIVKAEGKFIKKCQDMV 1330
Query: 243 VAIKYYTGGDLYLF 256
+A +G D+ +F
Sbjct: 1331 MAELVNSGEDVLVF 1344
>sp|P42424|YXDM_BACSU ABC transporter permease protein YxdM OS=Bacillus subtilis (strain
168) GN=yxdM PE=2 SV=3
Length = 622
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 86 ALEKWVIKFEQSVNILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYES 145
AL+KW + + NI I V D +YR +D AR F + +I F VL MY+S
Sbjct: 249 ALKKWKTFYLRGKNI------IWVSDLVYRLKDNARLFFIVSIISAVAFTATGVLAMYKS 302
>sp|A0Q0A7|ARGR_CLONN Arginine repressor OS=Clostridium novyi (strain NT) GN=argR PE=3
SV=1
Length = 151
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 6 SQTVSVFSNKAINLKSVASFNTIKTLRFNPPSSPRSL-SRNFCRVQATILQD 56
++ V+VFSN I++++V +F +KTL + ++ S+ S NF + TI D
Sbjct: 73 NKLVNVFSNTVISVENVQNFVVVKTLSGSGSAAAESIDSMNFDGIAGTIAGD 124
>sp|C5DJV1|RTC1_LACTC Restriction of telomere capping protein 1 OS=Lachancea thermotolerans
(strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=RTC1 PE=3
SV=1
Length = 1290
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 10/56 (17%)
Query: 94 FEQSV---NILLTESVIMVLDALYRDRDYARFFVLETIARVPYFAFISVLHMYESF 146
FEQSV N+LLT S+I++ ++ T+ + FI++LH YE F
Sbjct: 1119 FEQSVATGNVLLTISIILLFQTTFK-------VTSTTVVKNALSEFINILHKYELF 1167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,570,281
Number of Sequences: 539616
Number of extensions: 4304547
Number of successful extensions: 9366
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 9303
Number of HSP's gapped (non-prelim): 50
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)