BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022656
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R8W6|LC7L3_PONAB Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 21 FEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERL--SQEVEPAPPPPISAEKSE 78
+EKS R +E + ++ + L+ +++RR+RRG RL SQ + + + + E
Sbjct: 70 YEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEE 127
Query: 79 QLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQE 138
++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ L + + AQE
Sbjct: 128 KIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFA-AQE 186
Query: 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEKAREE 192
K+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E KE K EE
Sbjct: 187 KQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEE 240
>sp|O95232|LC7L3_HUMAN Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2
Length = 432
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 21 FEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERL--SQEVEPAPPPPISAEKSE 78
+EKS R +E + ++ + L+ +++RR+RRG RL SQ + + + + E
Sbjct: 70 YEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEE 127
Query: 79 QLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQE 138
++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ L + + AQE
Sbjct: 128 KIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFA-AQE 186
Query: 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEKAREE 192
K+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E KE K EE
Sbjct: 187 KQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEE 240
>sp|Q3SX41|LC7L3_BOVIN Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1
Length = 432
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 21 FEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERL--SQEVEPAPPPPISAEKSE 78
+EKS R +E + ++ + L+ +++RR+RRG RL SQ + + + + E
Sbjct: 70 YEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEE 127
Query: 79 QLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQE 138
++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ L + + AQE
Sbjct: 128 KIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFA-AQE 186
Query: 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEKAREE 192
K+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E KE K EE
Sbjct: 187 KQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEE 240
>sp|Q5SUF2|LC7L3_MOUSE Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1
Length = 432
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 21 FEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERL--SQEVEPAPPPPISAEKSE 78
+EKS R +E + ++ + L+ +++RR+RRG RL SQ + + + + E
Sbjct: 70 YEKSSRF--MKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEE 127
Query: 79 QLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQE 138
++ VL +KI LL+Q+E LG GKV+EA+ +M+ VE L E+ L + + AQE
Sbjct: 128 KIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFA-AQE 186
Query: 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEKAREE 192
K+M +CE+CG+FL+ DA R H+ GKQH+GY ++ + E KE K EE
Sbjct: 187 KQMEVCEVCGAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEE 240
>sp|Q54XQ8|LUC7L_DICDI Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1
Length = 360
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 103/195 (52%), Gaps = 31/195 (15%)
Query: 17 CDCSFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVE--------PAP 68
C ++ + D Y +E E + E L+ D D++++R +ERL Q P
Sbjct: 68 CVKQYQNNKDKDKY--DYEREWVRVIEGLISDNDKKIKRNKERLLQNPNGDANHHGGPIQ 125
Query: 69 PPPISA------------EKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEIL 116
IS E++ +++ L+ KI+ LL++ E LGE G++ EA+ALM + + L
Sbjct: 126 QQSISQLDDEEGGLLPDKEQNSKITELDLKIQELLKKAEELGEEGQITEAQALMTEADEL 185
Query: 117 NVEKTTL--TQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGYGM 174
+K L +Q +N + K+M++CEICG+ L D +R+ SH+ GK+HIG+
Sbjct: 186 KNQKVELEKIEQEKN-------ENKRMSVCEICGALLFVGDKEKRSISHLEGKKHIGFQK 238
Query: 175 VRDFITEYKEAKEKA 189
+R+ + EY ++ +A
Sbjct: 239 IREVMEEYYKSGRRA 253
>sp|Q9CYI4|LUC7L_MOUSE Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l
PE=2 SV=2
Length = 371
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 5 LDCIP------VKMCYYVCDCSFEKSPRHDAYVPK------FEAELAQFCEKLVMDLDRR 52
LDC P +M C + + R D + FE + E + + DRR
Sbjct: 41 LDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRR 100
Query: 53 VRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRK 112
++RL+ E + +SA K+E++ L E+I LL + E LG G VDE++ ++ +
Sbjct: 101 TELAKKRLA-ETQEEISAEVSA-KAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
Query: 113 VEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGY 172
VE + +K ++ +N Q++K+ +CE+C ++L +D R H GK H+G+
Sbjct: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
Query: 173 GMVRD 177
+R+
Sbjct: 219 IQIRE 223
>sp|Q9NQ29|LUC7L_HUMAN Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L
PE=1 SV=1
Length = 371
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 5 LDCIP------VKMCYYVCDCSFEKSPRHDAYVPK------FEAELAQFCEKLVMDLDRR 52
LDC P +M C + + R D + FE + E + + DRR
Sbjct: 41 LDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRR 100
Query: 53 VRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRK 112
++RL+ E + +SA K+E++ L E+I LL + E LG G VDE++ ++ +
Sbjct: 101 TELAKKRLA-ETQEEISAEVSA-KAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILME 158
Query: 113 VEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAAERTQSHISGKQHIGY 172
VE + +K ++ +N Q++K+ +CE+C ++L +D R H GK H+G+
Sbjct: 159 VEKVRAKKKEAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGF 218
Query: 173 GMVRD 177
+R+
Sbjct: 219 IQIRE 223
>sp|Q9Y383|LC7L2_HUMAN Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2
PE=1 SV=2
Length = 392
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 34 FEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQ 93
FE + + + D DRR ++RL++ E A K+E++ L E+I LL +
Sbjct: 82 FELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEV--AAKAERVHELNEEIGKLLAK 139
Query: 94 VETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVA 153
VE LG G V+E++ +M +VE +K + +N Q++K+ +CE+C ++L
Sbjct: 140 VEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGL 199
Query: 154 NDAAERTQSHISGKQHIGYGMVRDFITEYK 183
+D R H GK H+G+ +R+ + E K
Sbjct: 200 HDNDRRLADHFGGKLHLGFIEIREKLEELK 229
>sp|Q7TNC4|LC7L2_MOUSE Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2
PE=1 SV=1
Length = 392
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 34 FEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQ 93
FE + + + D DRR ++RL++ E A K+E++ L E+I LL +
Sbjct: 82 FELDAMDHLQSFIADCDRRTEVSKKRLAETQEEISAEV--AAKAERVHELNEEIGKLLAK 139
Query: 94 VETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVA 153
VE LG G V+E++ +M +VE +K + +N Q++K+ +CE+C ++L
Sbjct: 140 VEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGL 199
Query: 154 NDAAERTQSHISGKQHIGYGMVRDFITEYK 183
+D R H GK H+G+ +R+ + E K
Sbjct: 200 HDNDRRLADHFGGKLHLGFIEIREKLEELK 229
>sp|Q09217|YP68_CAEEL Uncharacterized protein B0495.8 OS=Caenorhabditis elegans
GN=B0495.8 PE=2 SV=1
Length = 313
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 34 FEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQ 93
++ + + E V +D + + RE+L +V+ + K++Q++ +EEKI ++
Sbjct: 81 YDVDAFEIIEHAVHLVDIEIAKVREKLEDDVKTQTSQAADS-KAKQVAEIEEKIAKNVDD 139
Query: 94 VETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMM--AQEKKMALCEICGSFL 151
+E LG GK++E+ L + VE L EK + SQ + + K+ +CE CG+ L
Sbjct: 140 IEKLGNEGKIEESMKLHKYVEELR-EKIQEIEDSQTEVKTAGPGSNSAKLRVCEDCGAQL 198
Query: 152 VANDAAERTQSHISGKQHIGYGMVRDFITEYKEAKEKAREE 192
D R H +GK HIG R+ + KE ++ R+E
Sbjct: 199 NITDHESRIADHYNGKMHIGMVETRETYLKMKETIDERRKE 239
>sp|Q07508|LUC7_YEAST Protein LUC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=LUC7 PE=1 SV=1
Length = 261
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 21 FEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQL 80
+E+ + P+FE E + V + + ++ + L E + +E+L
Sbjct: 80 YEREVKQGKTFPEFEREYLAILSRFVNECNGQISVALQNLKHTAEERMKIQ---QVTEEL 136
Query: 81 SVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQN--DKVLMMAQE 138
VL+ +I + +++++L A +V K++ L ++ + ++ +N + V AQ+
Sbjct: 137 DVLDVRIGLMGQEIDSLIRADEVSMGMLQSVKLQELISKRKEVAKRVRNITENVGQSAQQ 196
Query: 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIGYGMVRD 177
K + +CE+CG++L D R H GK H+GY +R+
Sbjct: 197 K-LQVCEVCGAYLSRLDTDRRLADHFLGKIHLGYVKMRE 234
>sp|O23212|U2A2A_ARATH Splicing factor U2af large subunit A OS=Arabidopsis thaliana
GN=U2AF65A PE=2 SV=2
Length = 573
Score = 39.3 bits (90), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 169 HIGYGMVRDFITEYKEAKEKAREEERLAKEKEVEDRRKQREKEYESRKRSGSSDRDRYRD 228
H G G V D I +EE ++ E+ED+ + K ESR D +R
Sbjct: 7 HEGNGTVADAI----------YDEENGGRDGEIEDQLDSKPKR-ESR------DHERETS 49
Query: 229 RDRDRERERYRERDRERSREWDGRSGRDGGRGADWRSRDRHRD 271
R +DRERE+ R++DRER E RS G + RSRD+ RD
Sbjct: 50 RSKDREREKGRDKDRERDSEVSRRSRDRDGEKSKERSRDKDRD 92
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 20/104 (19%)
Query: 187 EKAREEERLAKEKEVE-DRRKQREKEYE-----SRKRSGSSDRDRYRDRDRD----RERE 236
EKARE++ ++KE+E R K ++KE E R + DRD+ RD+DRD ++R+
Sbjct: 811 EKAREKD---QDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRD 867
Query: 237 RYRERDRERSREWDGRSGRDGGRGADWRSRDRHRDRSRSRSPVR 280
+ RE+DR++ RE D R+ R RD+ R++ R + V+
Sbjct: 868 KVREKDRDKLREKDREKIRE-------RDRDKGREKDRDKEQVK 904
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 187 EKAREEERLAKEKEVE-DRRKQREKEYE-SRKRSGSSDRDRYRDRDRDRERERYRERDR- 243
EK RE++ ++KE+E DR K ++KE E R++ + ++ R++DRD+E E+ RE+D+
Sbjct: 763 EKCREKD---QDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQD 819
Query: 244 ---ERSREWDGRSGRDGGRGADWRSRDRHRDRSRSRSPVRHGHRRSPRSPVRQ 293
E+ RE D + G+ D R + R +DR + R R R R VR+
Sbjct: 820 KELEKGREKDQDKELEKGQEKD-RDKVREKDRDKVRDKDRDKVREKDRDKVRE 871
>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio GN=traf3ip1 PE=2 SV=1
Length = 629
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 13/75 (17%)
Query: 209 EKEYESRKRSGSSDRDRYRDRDRDRERERYRERDRERSREWDGRSGRDGGRGADWRSRDR 268
E+ + R+R + DRDR +D+ RDRE+++ RE++RER ++ + R ++R
Sbjct: 198 ERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDRN-------------REKER 244
Query: 269 HRDRSRSRSPVRHGH 283
RD+ R + R H
Sbjct: 245 ERDKDRDKKKERESH 259
>sp|Q5XIN3|MIPT3_RAT TRAF3-interacting protein 1 OS=Rattus norvegicus GN=Traf3ip1 PE=2
SV=1
Length = 653
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 20/122 (16%)
Query: 184 EAKEKAREEERLAKEKEVEDRRKQREKEYESRKRSGSSDRDRYRDRDRDRERERYRERDR 243
E KE++ E KE E+++ K REKE + ++++ +DRDR+R+ DRDR R+ RE+ R
Sbjct: 170 EVKERSSSAEHKQKE-ELKEDSKPREKERD-KEKAKEADRDRHREPDRDRNRDGEREKAR 227
Query: 244 ERSREWDGRSGR----------------DGGRGAD-WRSRDRHRDRSRSRSPVRHG-HRR 285
R+++ R+ + DGG+ + + RDR + + R R ++G H R
Sbjct: 228 ARAKQDRDRNNKDRDRETERDRDRDRRSDGGKEKERQKDRDRDKGKDRERRKSKNGEHTR 287
Query: 286 SP 287
P
Sbjct: 288 DP 289
>sp|Q8C9B9|DIDO1_MOUSE Death-inducer obliterator 1 OS=Mus musculus GN=Dido1 PE=1 SV=4
Length = 2256
Score = 34.7 bits (78), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 208 REKEYESRKRSGSSDRDRYRDRDRDRERERYRERDRERSREW 249
RE+++E RS DR R D+ RDR R RERD +R++EW
Sbjct: 2143 RERDWE---RSRDWDRHREWDKGRDRSSNRDRERDNDRAKEW 2181
>sp|Q3LSS0|C19L2_DANRE CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1
Length = 960
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 172 YGMVRDFITEYKEAKEKAREEERLAKEKEVEDRRKQREKEYESRKRS----------GSS 221
YG + +F KEA++ A E R + E R +RE+ ES +R+
Sbjct: 256 YGSMEEFQKRLKEAEDAAYGERR-----DDEKERGRREEGKESWRRNDREEGRERWRRDE 310
Query: 222 DRDRYRDRDRDRERERYRERDRERSREWDGRSGRDGGRGADWRSRDRHRDRSRSRSP 278
++DR+R DRD RER+R D + +E R +DG WR R + DR R RSP
Sbjct: 311 EKDRWRRNDRDEGRERWRREDGDEEKE---RWRKDG-----WR-RGENEDRRRERSP 358
>sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens GN=DIDO1 PE=1 SV=5
Length = 2240
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 181 EYKEAKEKAREEERL---AKEKEVEDRRKQREKEYESRKRSGSSDRDRYRDRDRDRERER 237
EY+ + R+ ER KEK +E+ Q + R+ R+ R+RD DR RE
Sbjct: 2077 EYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASEDRRRER-ERGRNWSRERDWDRPREW 2135
Query: 238 YRERDRERSREWDGRSGRDGGRGADWRSRDRHRDRSR 274
R RD++ SR+WD R+ R A+ R R+R DR +
Sbjct: 2136 DRHRDKDSSRDWD----RNRERSAN-RDREREADRGK 2167
>sp|B3KS81|SRRM5_HUMAN Serine/arginine repetitive matrix protein 5 OS=Homo sapiens
GN=SRRM5 PE=1 SV=3
Length = 715
Score = 31.6 bits (70), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 229 RDRDRERERYRERDRERSREWDGRSGRDGGRGADWRSRDRHRDRSRSRSPVR---HGHRR 285
RDR R R Y+ RDR RSR + RD R RS + RDRSRSRSP + H R
Sbjct: 411 RDRSRSRSPYKARDRSRSRSPN--KARDCSRS---RSPYKARDRSRSRSPNKARDHSRSR 465
Query: 286 SP 287
SP
Sbjct: 466 SP 467
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,245,732
Number of Sequences: 539616
Number of extensions: 4829379
Number of successful extensions: 85257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 1626
Number of HSP's that attempted gapping in prelim test: 47393
Number of HSP's gapped (non-prelim): 17632
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)