Query 022656
Match_columns 294
No_of_seqs 152 out of 286
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 08:59:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022656.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022656hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1l8d_A DNA double-strand break 95.1 0.17 5.9E-06 39.6 9.9 13 141-153 47-59 (112)
2 3na7_A HP0958; flagellar bioge 93.3 0.82 2.8E-05 41.0 11.6 60 39-98 62-124 (256)
3 1x0t_A Ribonuclease P protein 87.2 2.6 8.7E-05 33.8 8.0 66 80-157 16-81 (120)
4 2k3r_A Ribonuclease P protein 80.9 2.6 8.8E-05 34.0 5.5 64 82-157 13-76 (123)
5 3onj_A T-snare VTI1; helix, HA 78.4 5.9 0.0002 30.4 6.6 86 31-127 3-89 (97)
6 1m1j_B Fibrinogen beta chain; 75.5 15 0.00051 36.0 10.1 95 32-127 92-191 (464)
7 1lq7_A Alpha3W; three helix bu 73.8 6 0.00021 27.7 4.9 31 80-110 27-57 (67)
8 2qyw_A Vesicle transport throu 73.3 29 0.001 26.7 10.6 82 31-127 17-101 (102)
9 2yrk_A Zinc finger homeobox pr 69.5 1.1 3.6E-05 31.5 0.2 31 141-174 13-43 (55)
10 3cw1_L U1 small nuclear ribonu 68.6 1.7 5.7E-05 32.6 1.2 29 142-171 4-32 (77)
11 2lw1_A ABC transporter ATP-bin 68.6 30 0.001 25.8 8.3 54 74-127 18-79 (89)
12 4ani_A Protein GRPE; chaperone 68.6 5.9 0.0002 34.9 4.9 90 78-183 59-153 (213)
13 2i0m_A Phosphate transport sys 67.8 32 0.0011 28.8 9.4 121 35-165 76-198 (216)
14 3pwf_A Rubrerythrin; non heme 66.7 13 0.00044 31.4 6.5 17 92-108 89-105 (170)
15 1sum_B Phosphate transport sys 61.4 24 0.00083 30.2 7.5 81 78-166 117-199 (235)
16 1lko_A Rubrerythrin all-iron(I 60.9 36 0.0012 28.8 8.4 11 140-150 154-164 (191)
17 1vcs_A Vesicle transport throu 60.7 54 0.0019 25.1 9.6 81 31-127 7-90 (102)
18 1yuz_A Nigerythrin; rubrythrin 60.2 21 0.00071 30.8 6.8 58 90-150 123-180 (202)
19 2jee_A YIIU; FTSZ, septum, coi 59.3 26 0.00087 26.4 6.2 14 109-122 53-66 (81)
20 3pxg_A Negative regulator of g 58.3 19 0.00066 34.4 6.9 48 80-127 396-443 (468)
21 1lq7_A Alpha3W; three helix bu 57.7 22 0.00074 24.8 5.1 40 80-122 4-43 (67)
22 4afl_A P29ING4, inhibitor of g 56.9 48 0.0016 25.2 7.7 73 40-116 21-95 (104)
23 1dkg_A Nucleotide exchange fac 56.6 17 0.00057 31.5 5.5 44 139-182 84-133 (197)
24 1zu1_A DSRBP-ZFA, RNA binding 56.1 3.1 0.0001 33.4 0.7 28 140-170 31-58 (127)
25 3v1a_A Computational design, M 55.7 38 0.0013 22.9 6.0 39 83-121 6-44 (48)
26 1rik_A E6APC1 peptide; E6-bind 54.7 6.5 0.00022 21.1 1.8 21 141-164 2-22 (29)
27 2dq0_A Seryl-tRNA synthetase; 53.8 19 0.00065 34.9 6.0 48 78-127 45-92 (455)
28 1zu1_A DSRBP-ZFA, RNA binding 53.2 3.8 0.00013 32.8 0.8 31 140-173 92-122 (127)
29 2k5c_A Uncharacterized protein 52.8 3.1 0.00011 31.7 0.1 14 138-151 5-18 (95)
30 4b6x_A AVRRPS4, avirulence pro 52.7 71 0.0024 24.0 8.9 56 71-126 22-77 (90)
31 1tjl_A DNAK suppressor protein 52.0 75 0.0026 26.2 8.6 20 139-162 109-128 (151)
32 3qne_A Seryl-tRNA synthetase, 50.9 27 0.00093 34.3 6.6 45 80-126 49-93 (485)
33 1yzm_A FYVE-finger-containing 49.2 61 0.0021 22.2 6.9 41 83-123 7-47 (51)
34 1gp8_A Protein (scaffolding pr 49.0 19 0.00063 23.5 3.4 32 84-115 7-38 (40)
35 2lo3_A SAGA-associated factor 48.9 5.7 0.00019 26.4 0.9 28 139-166 15-42 (44)
36 1xwm_A PHOU, phosphate uptake 48.3 61 0.0021 27.1 7.8 80 78-165 117-198 (217)
37 1z0k_B FYVE-finger-containing 45.8 68 0.0023 23.3 6.4 42 82-123 24-65 (69)
38 2m0e_A Zinc finger and BTB dom 45.7 14 0.00048 19.4 2.3 14 141-154 2-15 (29)
39 1t72_A Phosphate transport sys 45.6 71 0.0024 26.7 7.8 80 78-165 121-202 (227)
40 1ard_A Yeast transcription fac 45.1 7.3 0.00025 20.8 0.9 21 141-164 2-22 (29)
41 2odv_A Plectin 1, HD1; plakin 44.8 1.6E+02 0.0055 25.8 11.5 54 73-127 167-220 (235)
42 1znf_A 31ST zinc finger from X 44.7 12 0.00039 19.7 1.8 25 142-171 2-26 (27)
43 1njq_A Superman protein; zinc- 43.7 5.5 0.00019 23.6 0.2 22 140-164 5-26 (39)
44 3mjh_B Early endosome antigen 43.7 6.9 0.00024 24.7 0.7 21 142-165 6-26 (34)
45 1td6_A F10_ORF294, hypothetica 43.4 1.4E+02 0.0048 27.0 9.4 70 1-76 20-92 (306)
46 1rim_A E6APC2 peptide; E6-bind 43.1 8.9 0.0003 22.0 1.1 26 141-171 2-27 (33)
47 2eoy_A Zinc finger protein 473 43.1 12 0.0004 23.0 1.8 28 139-171 10-37 (46)
48 2en7_A Zinc finger protein 268 43.1 11 0.00039 22.6 1.7 28 139-171 10-37 (44)
49 1wle_A Seryl-tRNA synthetase; 42.6 48 0.0016 32.6 6.9 51 77-127 83-139 (501)
50 2ely_A Zinc finger protein 224 42.1 16 0.00055 22.3 2.4 20 139-158 10-29 (46)
51 1p7a_A BF3, BKLF, kruppel-like 41.4 13 0.00044 21.4 1.7 28 139-171 9-36 (37)
52 2kvf_A Zinc finger and BTB dom 40.4 11 0.00037 20.1 1.2 21 141-164 3-23 (28)
53 2lf0_A Uncharacterized protein 40.3 63 0.0021 26.0 6.0 47 78-124 10-56 (123)
54 2aus_D NOP10, ribosome biogene 39.8 6.9 0.00024 27.9 0.3 14 139-152 3-16 (60)
55 2lw1_A ABC transporter ATP-bin 39.6 1.1E+02 0.0036 22.7 7.0 28 35-62 20-47 (89)
56 1yui_A GAGA-factor; complex (D 39.1 8.4 0.00029 24.8 0.6 23 139-164 22-44 (54)
57 2yte_A Zinc finger protein 473 39.0 11 0.00036 22.5 1.0 23 139-164 8-30 (42)
58 2i5o_A DNA polymerase ETA; zin 39.0 8.7 0.0003 24.9 0.6 26 139-164 7-32 (39)
59 6rxn_A Rubredoxin; electron tr 38.8 7.9 0.00027 26.0 0.4 10 142-151 31-40 (46)
60 1paa_A Yeast transcription fac 38.5 23 0.00079 18.8 2.5 21 141-164 2-22 (30)
61 1e52_A Excinuclease ABC subuni 38.5 63 0.0021 22.9 5.2 38 82-119 21-58 (63)
62 2lvr_A Zinc finger and BTB dom 44.7 6.6 0.00023 21.2 0.0 14 141-154 3-16 (30)
63 1z0j_B FYVE-finger-containing 38.3 1E+02 0.0035 21.7 6.6 43 82-124 13-55 (59)
64 1zr9_A Zinc finger protein 593 38.3 9.5 0.00033 30.8 0.9 30 139-171 48-77 (124)
65 2eou_A Zinc finger protein 473 37.9 12 0.00041 22.7 1.2 23 139-164 10-32 (44)
66 3r8n_T 30S ribosomal protein S 37.4 63 0.0022 24.3 5.4 36 82-117 21-56 (85)
67 1srk_A Zinc finger protein ZFP 37.4 7.9 0.00027 22.0 0.2 23 139-164 5-27 (35)
68 2r6a_C DNAG primase, helicase 37.1 78 0.0027 24.2 6.3 37 83-119 103-139 (143)
69 2m0d_A Zinc finger and BTB dom 37.1 7.1 0.00024 20.9 -0.0 22 140-164 2-23 (30)
70 4gzn_C ZFP-57, zinc finger pro 37.1 13 0.00044 25.5 1.3 29 138-171 29-57 (60)
71 2spc_A Spectrin; cytoskeleton; 36.8 1.2E+02 0.0042 22.1 7.6 50 77-127 49-98 (107)
72 2dfs_A Myosin-5A; myosin-V, in 35.6 1.7E+02 0.0058 31.4 10.3 51 76-127 989-1039(1080)
73 2m0f_A Zinc finger and BTB dom 35.6 9.8 0.00034 20.2 0.4 21 141-164 2-22 (29)
74 2yto_A Zinc finger protein 484 35.6 10 0.00036 23.2 0.6 23 139-164 10-32 (46)
75 2lvu_A Zinc finger and BTB dom 41.8 7.8 0.00027 20.4 0.0 13 141-153 2-14 (26)
76 4rxn_A Rubredoxin; electron tr 35.0 9.8 0.00033 26.4 0.4 9 142-150 37-45 (54)
77 2emk_A Zinc finger protein 28 35.0 14 0.00047 22.6 1.1 23 139-164 10-32 (46)
78 1klr_A Zinc finger Y-chromosom 35.0 18 0.00062 19.1 1.6 14 141-154 2-15 (30)
79 2en3_A ZFP-95, zinc finger pro 34.8 14 0.00047 22.6 1.1 23 139-164 10-32 (46)
80 2elr_A Zinc finger protein 406 34.4 13 0.00044 21.1 0.9 23 139-164 7-29 (36)
81 2eoj_A Zinc finger protein 268 34.4 8.3 0.00028 23.3 -0.0 28 139-171 10-37 (44)
82 2eov_A Zinc finger protein 484 34.1 14 0.00049 22.4 1.1 23 139-164 10-32 (46)
83 3hho_A CO-chaperone protein HS 34.1 1.8E+02 0.0063 24.0 8.4 37 82-118 124-160 (174)
84 2yu8_A Zinc finger protein 347 34.1 13 0.00045 22.7 0.9 23 139-164 10-32 (46)
85 3uo3_A J-type CO-chaperone JAC 34.0 1.7E+02 0.0057 24.5 8.2 44 80-123 127-170 (181)
86 2ytb_A Zinc finger protein 32; 33.9 10 0.00035 22.5 0.4 28 139-171 9-36 (42)
87 2apo_B Ribosome biogenesis pro 33.7 9.9 0.00034 27.0 0.3 11 140-150 5-15 (60)
88 3na7_A HP0958; flagellar bioge 33.6 2.4E+02 0.0082 24.6 9.6 14 141-154 222-235 (256)
89 2epc_A Zinc finger protein 32; 33.6 11 0.00038 22.4 0.5 23 139-164 9-31 (42)
90 1lrz_A FEMA, factor essential 33.6 1.4E+02 0.0047 28.0 8.4 8 146-153 313-320 (426)
91 3oja_B Anopheles plasmodium-re 33.5 3.3E+02 0.011 26.1 11.9 22 106-127 532-553 (597)
92 3u8p_A Cytochrome B562 integra 33.4 57 0.0019 30.6 5.4 26 93-118 117-142 (347)
93 2eor_A Zinc finger protein 224 33.4 12 0.00041 22.8 0.6 23 139-164 10-32 (46)
94 2em5_A ZFP-95, zinc finger pro 33.0 16 0.00053 22.3 1.2 28 139-171 10-37 (46)
95 2lvt_A Zinc finger and BTB dom 39.2 9.1 0.00031 20.6 0.0 21 141-164 2-22 (29)
96 2yrm_A B-cell lymphoma 6 prote 32.9 16 0.00053 22.1 1.1 23 139-164 8-30 (43)
97 2emj_A Zinc finger protein 28 32.7 12 0.00043 22.8 0.6 23 139-164 10-32 (46)
98 2el5_A Zinc finger protein 268 32.7 11 0.00038 22.5 0.4 23 139-164 8-30 (42)
99 2eoo_A ZFP-95, zinc finger pro 32.7 12 0.00042 22.8 0.6 23 139-164 10-32 (46)
100 2epw_A Zinc finger protein 268 32.6 14 0.00048 22.5 0.9 23 139-164 10-32 (46)
101 2epv_A Zinc finger protein 268 32.4 11 0.00037 22.9 0.3 23 139-164 10-32 (44)
102 2elx_A Zinc finger protein 406 32.4 10 0.00036 21.3 0.2 23 139-164 5-27 (35)
103 2em4_A Zinc finger protein 28 32.3 12 0.0004 23.0 0.4 23 139-164 10-32 (46)
104 2kvh_A Zinc finger and BTB dom 32.2 11 0.00038 20.0 0.3 22 140-164 2-23 (27)
105 2elp_A Zinc finger protein 406 32.2 16 0.00054 21.0 1.0 15 139-153 7-21 (37)
106 2enh_A Zinc finger protein 28 32.0 17 0.00058 22.2 1.2 28 139-171 10-37 (46)
107 2ep1_A Zinc finger protein 484 31.9 15 0.00051 22.3 0.9 28 139-171 10-37 (46)
108 1yk4_A Rubredoxin, RD; electro 31.8 12 0.0004 25.6 0.4 8 143-150 37-44 (52)
109 2emz_A ZFP-95, zinc finger pro 31.8 16 0.00056 22.3 1.1 23 139-164 10-32 (46)
110 2eof_A Zinc finger protein 268 31.6 13 0.00044 22.3 0.5 23 139-164 10-32 (44)
111 2ytj_A Zinc finger protein 484 31.6 12 0.00042 22.8 0.4 23 139-164 10-32 (46)
112 2eml_A Zinc finger protein 28 31.5 12 0.00041 22.9 0.4 23 139-164 10-32 (46)
113 2eox_A Zinc finger protein 473 31.5 13 0.00044 22.5 0.5 16 139-154 10-25 (44)
114 2yu5_A Zinc finger protein 473 31.4 15 0.00052 22.1 0.9 23 139-164 10-32 (44)
115 2en2_A B-cell lymphoma 6 prote 31.4 12 0.00042 22.2 0.4 23 139-164 9-31 (42)
116 2vkj_A TM1634; membrane protei 31.3 92 0.0032 24.0 5.4 32 85-116 51-82 (106)
117 2elo_A Zinc finger protein 406 31.3 12 0.00042 21.5 0.4 23 139-164 7-29 (37)
118 2en9_A Zinc finger protein 28 31.2 18 0.00061 22.0 1.2 23 139-164 10-32 (46)
119 2eow_A Zinc finger protein 347 31.1 13 0.00043 22.7 0.5 23 139-164 10-32 (46)
120 2emh_A Zinc finger protein 484 31.1 14 0.00047 22.6 0.6 16 139-154 10-25 (46)
121 2eom_A ZFP-95, zinc finger pro 31.0 17 0.00057 22.3 1.1 23 139-164 10-32 (46)
122 2ep3_A Zinc finger protein 484 31.0 11 0.00037 23.1 0.1 28 139-171 10-37 (46)
123 1t72_A Phosphate transport sys 30.8 1.1E+02 0.0036 25.6 6.5 22 75-96 44-65 (227)
124 2emi_A Zinc finger protein 484 30.8 12 0.00042 22.8 0.3 23 139-164 10-32 (46)
125 2eoh_A Zinc finger protein 28 30.7 16 0.00053 22.3 0.9 23 139-164 10-32 (46)
126 2emg_A Zinc finger protein 484 30.7 14 0.00047 22.6 0.6 28 139-171 10-37 (46)
127 3lay_A Zinc resistance-associa 30.6 1.3E+02 0.0045 25.3 6.9 48 80-127 87-136 (175)
128 2eoz_A Zinc finger protein 473 30.5 12 0.00042 22.8 0.3 23 139-164 10-32 (46)
129 1e8j_A Rubredoxin; iron-sulfur 30.5 13 0.00043 25.5 0.4 9 142-150 37-45 (52)
130 1fxk_C Protein (prefoldin); ar 30.5 1.6E+02 0.0053 23.0 7.0 19 43-61 87-105 (133)
131 2elq_A Zinc finger protein 406 30.4 11 0.00038 21.6 0.1 23 139-164 7-29 (36)
132 2eoq_A Zinc finger protein 224 30.3 18 0.00062 22.0 1.1 23 139-164 10-32 (46)
133 2v3b_B Rubredoxin 2, rubredoxi 30.3 13 0.00043 25.8 0.4 8 143-150 38-45 (55)
134 2eq2_A Zinc finger protein 347 30.3 15 0.00053 22.3 0.8 28 139-171 10-37 (46)
135 3alr_A Nanos protein; zinc-fin 30.2 13 0.00043 29.3 0.4 10 141-150 71-80 (106)
136 2eq1_A Zinc finger protein 347 30.0 14 0.00047 22.6 0.5 28 139-171 10-37 (46)
137 2em3_A Zinc finger protein 28 29.9 14 0.00047 22.6 0.5 23 139-164 10-32 (46)
138 2em8_A Zinc finger protein 224 29.6 15 0.00052 22.4 0.6 23 139-164 10-32 (46)
139 1nj3_A NPL4; NZF domain, rubre 29.6 17 0.00057 21.8 0.8 13 139-151 18-30 (31)
140 3r8s_X 50S ribosomal protein L 29.6 13 0.00045 27.6 0.3 13 142-154 2-14 (77)
141 2elv_A Zinc finger protein 406 29.5 10 0.00034 21.8 -0.3 23 139-164 7-29 (36)
142 2emp_A Zinc finger protein 347 29.4 15 0.00052 22.3 0.6 23 139-164 10-32 (46)
143 2eon_A ZFP-95, zinc finger pro 29.3 13 0.00046 22.7 0.3 28 139-171 10-37 (46)
144 1ik9_A DNA repair protein XRCC 29.2 2.8E+02 0.0096 24.0 10.6 49 78-126 146-194 (213)
145 1s35_A Beta-I spectrin, spectr 29.2 1.7E+02 0.0057 23.9 7.4 49 78-127 154-202 (214)
146 2els_A Zinc finger protein 406 29.2 13 0.00044 21.3 0.2 24 138-164 6-29 (36)
147 2emb_A Zinc finger protein 473 29.1 12 0.00042 22.6 0.1 28 139-171 10-37 (44)
148 2enf_A Zinc finger protein 347 29.1 16 0.00055 22.2 0.7 28 139-171 10-37 (46)
149 2emy_A Zinc finger protein 268 28.9 16 0.00054 22.3 0.6 23 139-164 10-32 (46)
150 2kn9_A Rubredoxin; metalloprot 28.9 14 0.00047 27.8 0.4 8 143-150 62-69 (81)
151 2yti_A Zinc finger protein 347 28.9 15 0.00051 22.4 0.5 28 139-171 10-37 (46)
152 2w0t_A Lethal(3)malignant brai 28.8 13 0.00044 24.8 0.2 11 140-150 5-15 (43)
153 2em6_A Zinc finger protein 224 28.7 16 0.00053 22.4 0.6 28 139-171 10-37 (46)
154 2eos_A B-cell lymphoma 6 prote 28.6 13 0.00044 22.2 0.1 28 139-171 9-36 (42)
155 2yth_A Zinc finger protein 224 28.6 19 0.00064 22.0 0.9 28 139-171 10-37 (46)
156 3h7h_A Transcription elongatio 28.6 15 0.00051 29.6 0.5 24 142-165 34-57 (120)
157 2vqe_T 30S ribosomal protein S 28.5 1.1E+02 0.0037 23.9 5.6 37 82-118 28-64 (106)
158 2ema_A Zinc finger protein 347 28.4 15 0.0005 22.4 0.4 23 139-164 10-32 (46)
159 2elt_A Zinc finger protein 406 28.3 15 0.0005 20.9 0.4 23 139-164 7-29 (36)
160 3mhs_E SAGA-associated factor 28.1 13 0.00044 28.8 0.1 22 139-164 73-94 (96)
161 1dx8_A Rubredoxin; electron tr 28.1 15 0.00051 26.7 0.4 9 142-150 41-49 (70)
162 2eme_A Zinc finger protein 473 28.0 15 0.0005 22.4 0.3 28 139-171 10-37 (46)
163 2ytm_A Zinc finger protein 28 27.8 22 0.00075 21.7 1.2 23 139-164 10-32 (46)
164 2eq3_A Zinc finger protein 347 27.6 13 0.00043 22.7 -0.1 28 139-171 10-37 (46)
165 2epz_A Zinc finger protein 28 27.4 17 0.0006 22.0 0.6 28 139-171 10-37 (46)
166 2emx_A Zinc finger protein 268 27.4 17 0.00059 21.8 0.6 23 139-164 8-30 (44)
167 1m1j_C Fibrinogen gamma chain; 27.3 4.1E+02 0.014 25.3 11.5 29 32-60 30-61 (409)
168 2elz_A Zinc finger protein 224 27.2 21 0.00071 21.7 1.0 28 139-171 10-37 (46)
169 2ytg_A ZFP-95, zinc finger pro 27.2 17 0.00057 22.1 0.5 28 139-171 10-37 (46)
170 3us6_A Histidine-containing ph 26.9 2.5E+02 0.0085 22.6 12.4 75 38-115 42-121 (153)
171 2yso_A ZFP-95, zinc finger pro 26.9 17 0.00057 22.1 0.5 23 139-164 10-32 (46)
172 2el6_A Zinc finger protein 268 26.9 16 0.00054 22.3 0.4 28 139-171 10-37 (46)
173 1ses_A Seryl-tRNA synthetase; 26.9 93 0.0032 29.6 5.9 24 104-127 64-87 (421)
174 2kvg_A Zinc finger and BTB dom 26.8 15 0.00051 19.6 0.2 21 141-164 3-23 (27)
175 2ytr_A Zinc finger protein 347 26.8 18 0.00061 21.9 0.6 28 139-171 10-37 (46)
176 2ytn_A Zinc finger protein 347 26.7 19 0.00065 21.9 0.7 28 139-171 10-37 (46)
177 3pe0_A Plectin; cytoskeleton, 26.7 3.4E+02 0.011 24.1 11.1 86 39-125 7-101 (283)
178 2ytt_A Zinc finger protein 473 26.6 20 0.00067 21.9 0.8 23 139-164 10-32 (46)
179 2eoe_A Zinc finger protein 347 26.6 18 0.0006 22.0 0.5 28 139-171 10-37 (46)
180 2en8_A Zinc finger protein 224 26.4 23 0.0008 21.3 1.1 28 139-171 10-37 (46)
181 2enc_A Zinc finger protein 224 26.3 16 0.00055 22.2 0.3 23 139-164 10-32 (46)
182 2bai_A Genome polyprotein; zin 26.2 16 0.00054 22.5 0.2 15 141-155 16-30 (32)
183 3frt_A Charged multivesicular 26.2 3.2E+02 0.011 23.7 11.8 65 44-124 10-74 (218)
184 2k4x_A 30S ribosomal protein S 26.1 20 0.00067 24.8 0.8 15 138-152 15-29 (55)
185 3lss_A Seryl-tRNA synthetase; 26.1 1.4E+02 0.0048 29.2 7.1 17 76-92 56-72 (484)
186 2emf_A Zinc finger protein 484 26.1 15 0.00051 22.4 0.1 28 139-171 10-37 (46)
187 2dq3_A Seryl-tRNA synthetase; 26.1 21 0.00071 34.2 1.2 20 107-126 78-97 (425)
188 2emm_A ZFP-95, zinc finger pro 26.0 18 0.00061 21.9 0.5 23 139-164 10-32 (46)
189 2eop_A Zinc finger protein 268 25.9 20 0.00068 21.7 0.7 23 139-164 10-32 (46)
190 2yrj_A Zinc finger protein 473 25.9 14 0.00048 22.4 -0.0 28 139-171 10-37 (46)
191 2em0_A Zinc finger protein 224 25.9 21 0.00071 21.7 0.8 28 139-171 10-37 (46)
192 1gh9_A 8.3 kDa protein (gene M 25.8 13 0.00046 27.1 -0.2 17 142-159 5-21 (71)
193 3hnw_A Uncharacterized protein 25.8 1.4E+02 0.0047 24.2 6.0 20 40-59 28-47 (138)
194 2eq4_A Zinc finger protein 224 25.8 22 0.00074 21.5 0.9 23 139-164 10-32 (46)
195 3bas_A Myosin heavy chain, str 25.7 2E+02 0.007 21.2 9.2 63 47-127 17-79 (89)
196 3fb2_A Spectrin alpha chain, b 25.7 2.8E+02 0.0095 22.8 8.2 39 85-124 67-105 (218)
197 3bvo_A CO-chaperone protein HS 25.6 3.1E+02 0.011 23.4 8.6 41 84-124 161-201 (207)
198 2em9_A Zinc finger protein 224 25.6 17 0.00057 22.1 0.3 28 139-171 10-37 (46)
199 2kfq_A FP1; protein, de novo p 25.6 18 0.00062 20.3 0.4 12 141-152 2-13 (32)
200 2lj9_A CP12 domain-containing 25.5 15 0.0005 28.7 0.0 44 80-123 25-69 (99)
201 2yts_A Zinc finger protein 484 25.4 16 0.00054 22.2 0.1 28 139-171 10-37 (46)
202 2ytp_A Zinc finger protein 484 25.4 15 0.0005 22.5 -0.0 28 139-171 10-37 (46)
203 3kdq_A Uncharacterized conserv 25.1 1.9E+02 0.0065 23.8 6.8 81 47-127 14-100 (154)
204 2dfs_A Myosin-5A; myosin-V, in 24.9 1.3E+02 0.0043 32.4 7.0 20 108-127 981-1000(1080)
205 2ytq_A Zinc finger protein 268 24.8 20 0.00068 21.8 0.5 28 139-171 10-37 (46)
206 2ep2_A Zinc finger protein 484 24.8 18 0.0006 22.0 0.3 28 139-171 10-37 (46)
207 2ytf_A Zinc finger protein 268 24.8 16 0.00056 22.1 0.1 28 139-171 10-37 (46)
208 1s24_A Rubredoxin 2; electron 24.7 18 0.00062 27.5 0.4 7 143-149 70-76 (87)
209 2cly_B ATP synthase D chain, m 24.6 75 0.0026 26.5 4.2 56 82-154 88-143 (160)
210 2hqh_E Restin; beta/BETA struc 24.4 16 0.00056 21.7 0.1 9 143-151 5-13 (26)
211 2cot_A Zinc finger protein 435 24.2 28 0.00094 23.7 1.3 11 140-150 45-55 (77)
212 2em2_A Zinc finger protein 28 24.2 20 0.00069 21.8 0.5 23 139-164 10-32 (46)
213 3vkg_A Dynein heavy chain, cyt 24.2 2.5E+02 0.0085 34.1 9.7 110 42-159 2012-2125(3245)
214 3mq9_A Bone marrow stromal ant 24.1 3.4E+02 0.011 25.3 9.3 20 75-94 401-420 (471)
215 2el4_A Zinc finger protein 268 23.9 17 0.00057 22.1 0.0 28 139-171 10-37 (46)
216 3abq_A Ethanolamine ammonia-ly 23.8 17 0.00058 35.2 0.1 28 141-169 321-355 (453)
217 2jl6_1 50S ribosomal protein L 23.6 20 0.00067 27.5 0.4 13 142-154 3-15 (89)
218 2en6_A Zinc finger protein 268 23.4 20 0.00068 21.8 0.3 23 139-164 10-32 (46)
219 2ept_A Zinc finger protein 32; 23.2 17 0.00058 21.5 -0.1 28 139-171 8-35 (41)
220 2epx_A Zinc finger protein 28 23.1 24 0.00081 21.4 0.7 23 139-164 10-32 (47)
221 2ytk_A Zinc finger protein 347 23.0 22 0.00077 21.5 0.5 23 139-164 10-32 (46)
222 2ep0_A Zinc finger protein 28 23.0 17 0.00059 22.1 -0.0 28 139-171 10-37 (46)
223 3uul_A Utrophin; spectrin repe 22.7 2.2E+02 0.0077 20.7 11.2 50 78-127 50-101 (118)
224 2l8e_A Polyhomeotic-like prote 22.7 24 0.00083 23.9 0.7 14 140-153 17-30 (49)
225 1sp2_A SP1F2; zinc finger, tra 22.7 45 0.0015 18.0 1.8 26 141-171 2-29 (31)
226 1x4t_A Hypothetical protein LO 22.5 2.6E+02 0.0089 21.3 6.8 45 36-94 24-68 (92)
227 2em7_A Zinc finger protein 224 22.5 22 0.00074 21.6 0.4 28 139-171 10-37 (46)
228 2qez_A Ethanolamine ammonia-ly 22.4 17 0.00058 35.2 -0.2 28 141-169 322-356 (455)
229 3v2d_1 50S ribosomal protein L 22.3 21 0.00073 27.7 0.3 13 142-154 3-15 (98)
230 2en1_A Zinc finger protein 224 22.2 19 0.00066 21.8 0.1 28 139-171 10-37 (46)
231 3fb2_A Spectrin alpha chain, b 22.1 3.3E+02 0.011 22.4 10.1 51 76-127 164-214 (218)
232 3htk_A Structural maintenance 22.1 1.8E+02 0.006 19.5 5.2 23 39-61 7-29 (60)
233 2adr_A ADR1; transcription reg 22.1 26 0.00089 22.4 0.7 29 139-171 28-56 (60)
234 2lv2_A Insulinoma-associated p 22.1 19 0.00065 26.4 0.0 17 138-154 25-41 (85)
235 2ene_A Zinc finger protein 347 21.8 19 0.00064 21.9 -0.1 23 139-164 10-32 (46)
236 2yy0_A C-MYC-binding protein; 21.7 74 0.0025 21.7 3.0 24 75-98 23-46 (53)
237 2ytd_A Zinc finger protein 473 21.7 26 0.00088 21.2 0.6 23 139-164 10-32 (46)
238 1bbo_A Human enhancer-binding 21.7 18 0.0006 23.0 -0.2 23 139-164 27-49 (57)
239 2eq0_A Zinc finger protein 347 21.6 19 0.00064 21.9 -0.1 28 139-171 10-37 (46)
240 2f42_A STIP1 homology and U-bo 21.1 1.2E+02 0.004 25.7 4.8 10 143-152 143-152 (179)
241 3eph_A TRNA isopentenyltransfe 21.1 39 0.0013 32.4 2.0 28 141-170 360-392 (409)
242 3edu_A Beta-I spectrin, spectr 21.0 3.5E+02 0.012 22.2 11.4 52 76-127 152-203 (218)
243 2jvx_A NF-kappa-B essential mo 20.9 29 0.00099 20.9 0.7 21 142-165 4-24 (28)
244 3iuf_A Zinc finger protein UBI 20.9 24 0.00082 22.1 0.3 29 139-171 5-33 (48)
245 1wle_A Seryl-tRNA synthetase; 20.9 5.8E+02 0.02 24.8 10.4 48 75-127 88-146 (501)
246 3uun_A Dystrophin; triple heli 20.6 2.5E+02 0.0084 20.3 10.8 51 77-127 49-101 (119)
247 2k48_A Nucleoprotein; viral pr 20.4 1.5E+02 0.0053 23.1 4.9 66 34-99 32-103 (107)
248 3n71_A Histone lysine methyltr 20.4 1.5E+02 0.005 28.6 6.0 40 78-117 300-339 (490)
249 3uk3_C Zinc finger protein 217 20.2 33 0.0011 21.6 0.9 11 140-150 31-41 (57)
250 2epq_A POZ-, at HOOK-, and zin 20.1 29 0.00098 20.9 0.6 23 139-164 8-30 (45)
No 1
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=95.13 E-value=0.17 Score=39.58 Aligned_cols=13 Identities=31% Similarity=0.738 Sum_probs=10.7
Q ss_pred ccccccccccccc
Q 022656 141 MALCEICGSFLVA 153 (294)
Q Consensus 141 m~VCeVCGA~Ls~ 153 (294)
-.+|+|||.-|..
T Consensus 47 g~~CPvCgs~l~~ 59 (112)
T 1l8d_A 47 KGKCPVCGRELTD 59 (112)
T ss_dssp SEECTTTCCEECH
T ss_pred CCCCCCCCCcCCH
Confidence 4689999998763
No 2
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=93.35 E-value=0.82 Score=40.98 Aligned_cols=60 Identities=12% Similarity=0.161 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCC---chhhHHHHHHHHHHHHHHHHHHHHHH
Q 022656 39 AQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPI---SAEKSEQLSVLEEKIKNLLEQVETLG 98 (294)
Q Consensus 39 l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~---~~~~~e~i~~l~ekI~~ll~eaE~LG 98 (294)
+.-++.-|.++..+|.+.+.+|..........+. .......+..+++.|..+|.++|.+-
T Consensus 62 ~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~ 124 (256)
T 3na7_A 62 VSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKS 124 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888888888888888542210000000 11123456677777777777776653
No 3
>1x0t_A Ribonuclease P protein component 4; pyrococcus horikoshii OT3, hydrolase; 1.60A {Pyrococcus horikoshii} PDB: 2zae_B
Probab=87.16 E-value=2.6 Score=33.82 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccccccccCCch
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAA 157 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeVCGA~Ls~~D~d 157 (294)
.....+.|+-|.+-|..| ..++.+-|..++..+..+-..- ..-.++.-+-.+|.-||+||+.+-|-
T Consensus 16 ~~ia~~Ri~~L~~~A~~~-~~~~p~lSr~Y~~~~~~is~k~-----------~irlp~~~KR~~Ck~C~s~LiPG~t~ 81 (120)
T 1x0t_A 16 KKIAIERIDTLFTLAERV-ARYSPDLAKRYVELALEIQKKA-----------KVKIPRKWKRRYCKRCHTFLIPGVNA 81 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHH-----------TCCCCTTTTTSBCTTTCCBCCBTTTE
T ss_pred hHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHh-----------ccCCCHHHHHHhccCCCCEeECCCce
Confidence 345577899999999888 6788888887777765553221 11233566788999999999988653
No 4
>2k3r_A Ribonuclease P protein component 4; PFU RPP21, RNAse P, hydrolase, tRNA processing; NMR {Pyrococcus furiosus} PDB: 2ki7_B
Probab=80.87 E-value=2.6 Score=34.00 Aligned_cols=64 Identities=19% Similarity=0.279 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccccccccCCch
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAA 157 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeVCGA~Ls~~D~d 157 (294)
...+.|+-|.+-|..+ ..++.+-|...+..+..+-..- ..-.++.-+-.+|.-||+||+.+-|-
T Consensus 13 ia~~Ri~~L~~~A~~~-~~~~p~LSr~Y~~~~~~Is~K~-----------~irlp~~~KR~~Ck~C~s~LIPG~t~ 76 (123)
T 2k3r_A 13 IAKERIDILFSLAERV-FPYSPELAKRYVELALLVQQKA-----------KVKIPRKWKRRYCKKCHAFLVPGINA 76 (123)
T ss_dssp --CHHHHHHHHHHHHH-HHHCHHHHHHHHHHHHHHHHHH-----------TCCCSSTTTTSBCTTTCCBCCBTTTE
T ss_pred HHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHh-----------ccCCCHHHHHHhccCCCCEeECCCce
Confidence 4467788888888888 5566777777776665443211 11233556788999999999987553
No 5
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=78.45 E-value=5.9 Score=30.41 Aligned_cols=86 Identities=8% Similarity=0.064 Sum_probs=46.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 022656 31 VPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALM 110 (294)
Q Consensus 31 ~~~YE~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~ 110 (294)
|.+||.+|-.++ .++-.+|.... ... +..-......+...|.+..+-|..|--++..+| |....=-.++
T Consensus 3 F~~YE~df~~~~----~~i~~~l~~~~----~~~-ge~Rk~~i~~ie~~ldEA~ell~qMelE~~~~~--~p~~~R~~~~ 71 (97)
T 3onj_A 3 LISYESDFKTTL----EQAKASLAEAP----SQP-LSQRNTTLKHVEQQQDELFDLLDQMDVEVNNSI--GDASERATYK 71 (97)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHGG----GSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHh----ccC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 568999996544 44445554331 100 000001122233444555555555555555554 3455556788
Q ss_pred HHHHHHHHHHHH-HHHhh
Q 022656 111 RKVEILNVEKTT-LTQQS 127 (294)
Q Consensus 111 ~~ve~Lk~er~~-l~~~~ 127 (294)
.++...+.+... |...+
T Consensus 72 ~klr~Yk~dl~~~lk~~l 89 (97)
T 3onj_A 72 AKLREWKKTIQSDIKRPL 89 (97)
T ss_dssp HHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888877 77665
No 6
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=75.52 E-value=15 Score=36.00 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=42.0
Q ss_pred hhHHHHH---HHHHHHHHHHHHHHHHHHHHhhhhcCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Q 022656 32 PKFEAEL---AQFCEKLVMDLDRRVRRGRERLSQEVEPA-PPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAE 107 (294)
Q Consensus 32 ~~YE~e~---l~~L~~lI~d~dRkI~~~k~RL~~~~e~~-~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~ 107 (294)
..|+..+ ++.|+..|..+......+..-+..-+... +...........|.++.+.|......+.+.. ...+...+
T Consensus 92 ~k~q~~V~~~LqeLe~~l~~lsn~Ts~~~~~i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~~i~~~~-~~~~~~~i 170 (464)
T 1m1j_B 92 LKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYIKDNL-DNNIPSSL 170 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTHHHHHH
T ss_pred HHhhhhhHhHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHH-hccchhHH
Confidence 3455544 66777777777766655544431100000 0000112222334444444444444444332 22222333
Q ss_pred H-HHHHHHHHHHHHHHHHHhh
Q 022656 108 A-LMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 108 ~-l~~~ve~Lk~er~~l~~~~ 127 (294)
. |...++.|+.+...|+..+
T Consensus 171 ~~L~~~~~~l~~ki~~l~~~~ 191 (464)
T 1m1j_B 171 RVLRAVIDSLHKKIQKLENAI 191 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 2 3455666666666666544
No 7
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=73.85 E-value=6 Score=27.68 Aligned_cols=31 Identities=29% Similarity=0.516 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALM 110 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~ 110 (294)
|.+|..+-.+|-++||+||--|+|......+
T Consensus 27 ieelkkkweelkkkieelggggevkkveeev 57 (67)
T 1lq7_A 27 IEELKKKWEELKKKIEELGGGGEVKKVEEEV 57 (67)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhHHHHHH
Confidence 4566666667777777788777776554433
No 8
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=73.28 E-value=29 Score=26.67 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=40.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHh---cCCHHHHH
Q 022656 31 VPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGE---AGKVDEAE 107 (294)
Q Consensus 31 ~~~YE~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGe---eG~VdeA~ 107 (294)
|.+||.+|-.++..+ .++|.. |.... ...+....|..++..|.+..+-++++.. .-....-.
T Consensus 17 Fe~YE~df~~l~~~i----~~kl~~----i~~~~-------~~e~rk~~i~~ie~~ldEA~eLl~qMelE~r~~p~s~R~ 81 (102)
T 2qyw_A 17 FEKLHEIFRGLLEDL----QGVPER----LLGTA-------GTEEKKKLVRDFDEKQQEANETLAEMEEELRYAPLTFRN 81 (102)
T ss_dssp HHHHHHHHHHHHHHH----HHHHHH----HHTCC-------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHH----HHHHHH----hcccC-------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 468999996655544 455543 21100 1123333444444444433333333222 22333445
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 022656 108 ALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 108 ~l~~~ve~Lk~er~~l~~~~ 127 (294)
.+..++...+.+.+.|+.++
T Consensus 82 ~~~~klr~Yk~dL~~lk~el 101 (102)
T 2qyw_A 82 PMMSKLRNYRKDLAKLHREV 101 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 67777777777776665543
No 9
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=69.55 E-value=1.1 Score=31.49 Aligned_cols=31 Identities=32% Similarity=0.433 Sum_probs=24.1
Q ss_pred cccccccccccccCCchHHHHhhhcccccccHHH
Q 022656 141 MALCEICGSFLVANDAAERTQSHISGKQHIGYGM 174 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlGy~k 174 (294)
-.-|..||.- .++--=|+||+--|||++.++
T Consensus 13 ~~eC~lC~vk---Ys~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 13 KPECTLCGVK---YSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp CSCCTTTTCC---CCSSSCHHHHHTSHHHHHHHH
T ss_pred CccccccCcc---cccccchhhhhccHHHHHHHH
Confidence 3579999953 444456999999999998765
No 10
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=68.62 E-value=1.7 Score=32.57 Aligned_cols=29 Identities=28% Similarity=0.721 Sum_probs=23.1
Q ss_pred ccccccccccccCCchHHHHhhhccccccc
Q 022656 142 ALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.-|+.|..||. .|+..=...|..|+.|++
T Consensus 4 YyCdYCd~~lt-~Ds~s~Rk~H~~G~kH~~ 32 (77)
T 3cw1_L 4 FYCDYCDTYLT-HDSPSVRKTHCSGRKHKE 32 (77)
T ss_pred cccccCCceec-CCCHHHHHHHHccHHHHH
Confidence 35999999963 566665578999999987
No 11
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=68.59 E-value=30 Score=25.82 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=38.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 74 AEKSEQLSVLEEKIKNLLEQVETLGEA--------GKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 74 ~~~~e~i~~l~ekI~~ll~eaE~LGee--------G~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
-..+.+|..|..+|..|-.++..|-.+ .+.+..+.++.+++.+..+.+.+...+
T Consensus 18 ykeqrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erW 79 (89)
T 2lw1_A 18 YKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERW 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777777776666554332 467788888888888888888776655
No 12
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=68.56 E-value=5.9 Score=34.93 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccccccccCCch
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVANDAA 157 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeVCGA~Ls~~D~d 157 (294)
+++..|..+|..|-+++++|- +..+.+.++.+.++.-.. .+. ....+..+..++..+|.+.|+-
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~-----d~~lR~~AEfeN~RkR~~---rE~--------e~~~~~a~e~~~~~LLpVlDnl 122 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEME-----HRYLRLYADFENFRRRTR---QEM--------EAAEKYRAQSLASDLLPVLDNF 122 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH---HHH--------HHHHHHTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH---HHH--------HHHHHHHHHHHHHHHhHHHHHH
Confidence 456677777777777776662 344555555555543221 111 1224556677889999999999
Q ss_pred HHHHhhhcc-----cccccHHHHHHHHHHHH
Q 022656 158 ERTQSHISG-----KQHIGYGMVRDFITEYK 183 (294)
Q Consensus 158 ~Rl~dH~~G-----K~HlGy~kIRe~l~eL~ 183 (294)
.|--.|+.. .++-|+.+|...|..+-
T Consensus 123 erAl~~~~~~~~~~~l~eGvemi~k~l~~~L 153 (213)
T 4ani_A 123 ERALKIETDNEQAKSILQGMEMVYRSLVDAL 153 (213)
T ss_dssp HHHHSCCSCCSTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccccHHHHHHHHHHHHHHHHHHH
Confidence 997666532 34556666655554443
No 13
>2i0m_A Phosphate transport system protein PHOU; zinc-binding protein, structural genomics, PSI-2, PROT structure initiative; 2.40A {Streptococcus pneumoniae}
Probab=67.85 E-value=32 Score=28.80 Aligned_cols=121 Identities=17% Similarity=0.097 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 022656 35 EAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVE 114 (294)
Q Consensus 35 E~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve 114 (294)
+..++.-+-.++.+++|-=.-+.. +++.......... ......|..+...+..++..+-..-..++++.|..+...-+
T Consensus 76 dlr~i~~~l~i~~dlERIgD~a~~-Ia~~~~~~~~~~~-~~~~~~l~~m~~~v~~~l~~a~~a~~~~d~~~a~~v~~~d~ 153 (216)
T 2i0m_A 76 DLRFVISIMSSCSDLERMGDHMAG-IAKAVLQLKENQL-APDEEQLHQMGKLSLSMLADLLVAFPLHQASKAISIAQKDE 153 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHSCCSSCC-C--CHHHHHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344444555666666665443332 3221000000011 11215688889999999999999999999988877665433
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhccccccc--cccccccCCchHHHHhhhc
Q 022656 115 ILNVEKTTLTQQSQNDKVLMMAQEKKMALCEI--CGSFLVANDAAERTQSHIS 165 (294)
Q Consensus 115 ~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeV--CGA~Ls~~D~d~Rl~dH~~ 165 (294)
.+-.....+...+ -.. + +-..|.+ |-.|+.+..+-.|++||..
T Consensus 154 ~iD~l~~~~~~~~-~~~--l-----~~~~~~~~~~~~~~~i~~~lERI~Dha~ 198 (216)
T 2i0m_A 154 QIDQYYYALSKEI-IGL--M-----KDQETSIPNGTQYLYIIGHLERFADYIA 198 (216)
T ss_dssp HHHHHHHHHHHHH-HHT--T-----TSCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHH--H-----HhCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222222221 000 0 0124544 3335667788999999975
No 14
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=66.71 E-value=13 Score=31.36 Aligned_cols=17 Identities=6% Similarity=-0.001 Sum_probs=11.0
Q ss_pred HHHHHHHhcCCHHHHHH
Q 022656 92 EQVETLGEAGKVDEAEA 108 (294)
Q Consensus 92 ~eaE~LGeeG~VdeA~~ 108 (294)
.-|+..-++|..+-|..
T Consensus 89 ~~a~~A~eeg~~~~a~~ 105 (170)
T 3pwf_A 89 VYNKAAEFQGEKEAVRT 105 (170)
T ss_dssp HHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHH
Confidence 55666777787765533
No 15
>1sum_B Phosphate transport system protein PHOU homolog 2; ABC transport, PST, structural genomics, berkeley STRU genomics center, BSGC; 2.00A {Thermotoga maritima} SCOP: a.7.12.1
Probab=61.40 E-value=24 Score=30.18 Aligned_cols=81 Identities=9% Similarity=-0.019 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccc--ccccccccCC
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCE--ICGSFLVAND 155 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCe--VCGA~Ls~~D 155 (294)
..|..+-..+..++..+-.+-..++++.|..+...-+.+-.....+...+ -.. + .+ ..|. .|-.||.+..
T Consensus 117 ~~l~~m~~~v~~~l~~a~~a~~~~d~~~A~~v~~~d~~iD~l~~~l~~~~-~~~--l---~~--~~~~~~~~~~~l~i~~ 188 (235)
T 1sum_B 117 EDIPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEKVREEL-LLY--M---ME--SPKYVKRALLLLEIAG 188 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHSCCHHHHTHHHHHHHHHHHHHHHHHHHH-HHH--H---HH--CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--H---Hh--CCCcHHHHHHHHHHHH
Confidence 45788888889999999888899999888776654443333322332221 000 0 01 1344 3445666778
Q ss_pred chHHHHhhhcc
Q 022656 156 AAERTQSHISG 166 (294)
Q Consensus 156 ~d~Rl~dH~~G 166 (294)
+-.|++||..-
T Consensus 189 ~lERI~Dha~n 199 (235)
T 1sum_B 189 NIEIIADYATN 199 (235)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 89999999863
No 16
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=60.92 E-value=36 Score=28.84 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=7.3
Q ss_pred ccccccccccc
Q 022656 140 KMALCEICGSF 150 (294)
Q Consensus 140 km~VCeVCGA~ 150 (294)
+.-||.|||-.
T Consensus 154 ~~~~C~~CG~~ 164 (191)
T 1lko_A 154 TKWRCRNCGYV 164 (191)
T ss_dssp EEEEETTTCCE
T ss_pred ceEEECCCCCE
Confidence 35778888743
No 17
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=60.65 E-value=54 Score=25.07 Aligned_cols=81 Identities=12% Similarity=0.195 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHH
Q 022656 31 VPKFEAELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEA---GKVDEAE 107 (294)
Q Consensus 31 ~~~YE~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGee---G~VdeA~ 107 (294)
|.+||.+|..++. ++..+|.. |.... . .+....|..++..|.+..+-+++|..| -....=-
T Consensus 7 Fe~YE~df~~l~~----~i~~kl~~----i~~~~--g------eerk~~i~~ie~~l~EA~ell~qMelE~r~~p~~~R~ 70 (102)
T 1vcs_A 7 GEGYEQDFAVLTA----EITSKIAR----VPRLP--P------DEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRG 70 (102)
T ss_dssp CCCSHHHHHHHHH----HHHHHHHH----GGGSC--T------TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHH----hhccC--c------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHhHH
Confidence 4688999965554 44555553 21111 0 122233444444444333333333222 2222335
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 022656 108 ALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 108 ~l~~~ve~Lk~er~~l~~~~ 127 (294)
.++.+|...+.+.+.|..++
T Consensus 71 ~~~~klr~Yk~dL~~lk~el 90 (102)
T 1vcs_A 71 MYSNRMRSYKQEMGKLETDF 90 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78888999998888888776
No 18
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=60.16 E-value=21 Score=30.82 Aligned_cols=58 Identities=21% Similarity=0.288 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccccc
Q 022656 90 LLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSF 150 (294)
Q Consensus 90 ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeVCGA~ 150 (294)
.-.-++.+-++|+.+-|..+-.-++.=+..-+.+...+ ..-..+ ...+.-||.|||-.
T Consensus 123 y~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~~~~~ll-~~l~~~--~~~~~~~C~~CG~i 180 (202)
T 1yuz_A 123 YPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAY-NDIDAP--DDDKFHLCPICGYI 180 (202)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTCC--CSCCEEECSSSCCE
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcC--CCCcEEEECCCCCE
Confidence 33445556667777655444333332222222233222 111011 23356789999854
No 19
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=59.28 E-value=26 Score=26.35 Aligned_cols=14 Identities=21% Similarity=0.238 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHH
Q 022656 109 LMRKVEILNVEKTT 122 (294)
Q Consensus 109 l~~~ve~Lk~er~~ 122 (294)
+..+.+.|+.+...
T Consensus 53 L~~en~qLk~E~~~ 66 (81)
T 2jee_A 53 LERENNHLKEQQNG 66 (81)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555554443
No 20
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=58.27 E-value=19 Score=34.41 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
|.+|+.+|..+..+.+.+...++++.|..+..+.+.|+.+.+.+...+
T Consensus 396 i~~l~~~i~~l~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~ 443 (468)
T 3pxg_A 396 LKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSW 443 (468)
T ss_dssp THHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556778888888888888889999999999999999999998888776
No 21
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=57.75 E-value=22 Score=24.84 Aligned_cols=40 Identities=38% Similarity=0.551 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTT 122 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~ 122 (294)
+..|+++++.|-+++..||--|.|++-.. +-+.|+...++
T Consensus 4 vkaleekvkaleekvkalggggrieelkk---kweelkkkiee 43 (67)
T 1lq7_A 4 VKALEEKVKALEEKVKALGGGGRIEELKK---KWEELKKKIEE 43 (67)
T ss_dssp HHHHHHHHHHHHHHHHHSCCSSSHHHHHH---HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCccHHHHHH---HHHHHHHHHHH
Confidence 56788999999999999999999987544 44455554444
No 22
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=56.94 E-value=48 Score=25.18 Aligned_cols=73 Identities=23% Similarity=0.327 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCC--CCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 022656 40 QFCEKLVMDLDRRVRRGRERLSQEVEP--APPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEIL 116 (294)
Q Consensus 40 ~~L~~lI~d~dRkI~~~k~RL~~~~e~--~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~L 116 (294)
+.+-.+|.++|.++..+...+.+..+. ......++. .....+ .+|...+.++..|+.+ +|.-|..+...|+.-
T Consensus 21 ~r~~~~irelD~~~~~~~~~i~~~~~~~~~~~~~~~~~--~r~~~l-~~I~~~~~~~~~l~dE-Kv~lA~~~~dlvdkh 95 (104)
T 4afl_A 21 QRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSE--EKLALL-KQIQEAYGKCKEFGDD-KVQLAMQTYEMVDKH 95 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCCHH--HHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCChh--hhHHHH-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 334456777777776666655421100 000111221 223344 6888888888888765 444555555555544
No 23
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=56.56 E-value=17 Score=31.47 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=30.5
Q ss_pred hccccccccccccccCCchHHHHhhhcc------cccccHHHHHHHHHHH
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISG------KQHIGYGMVRDFITEY 182 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~G------K~HlGy~kIRe~l~eL 182 (294)
.+..+..++..+|.+.|+-.|--.|..+ .++-|+.+|...|..+
T Consensus 84 ~~~a~~~~~~~LLpv~DnlerAl~~~~~~~~~~~~l~~Gv~~~~~~l~~~ 133 (197)
T 1dkg_A 84 HKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEDIELTLKSMLDV 133 (197)
T ss_dssp HHTSGGGHHHHSHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhhhccccchHHHHHHHHHHHHHHHHHH
Confidence 4567788899999999999997777632 2456766665554443
No 24
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=56.14 E-value=3.1 Score=33.35 Aligned_cols=28 Identities=18% Similarity=0.593 Sum_probs=23.0
Q ss_pred ccccccccccccccCCchHHHHhhhcccccc
Q 022656 140 KMALCEICGSFLVANDAAERTQSHISGKQHI 170 (294)
Q Consensus 140 km~VCeVCGA~Ls~~D~d~Rl~dH~~GK~Hl 170 (294)
+...|.||.+.+. +..=+..|+.||.|.
T Consensus 31 ~~~~C~~C~v~~~---S~s~~~~H~~gkkH~ 58 (127)
T 1zu1_A 31 SDTQCKVCSAVLI---SESQKLAHYQSRKHA 58 (127)
T ss_dssp CSSEETTTTEECC---SHHHHHHHHHCHHHH
T ss_pred CCCcCcCCCCEeC---CHHHHHHHHCcHHHH
Confidence 4578999998544 567789999999997
No 25
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=55.69 E-value=38 Score=22.92 Aligned_cols=39 Identities=28% Similarity=0.379 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q 022656 83 LEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKT 121 (294)
Q Consensus 83 l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~ 121 (294)
|.++|..+-.-|+.+...|+.|+...|-.-+.+|..|..
T Consensus 6 L~EQ~~~I~~~I~qAk~~rRfdEV~~L~~NL~EL~~E~~ 44 (48)
T 3v1a_A 6 LAQQIKNIHSFIHQAKAAGRMDEVRTLQENLHQLMHEYF 44 (48)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 456666666777888899999998888877777776653
No 26
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=54.71 E-value=6.5 Score=21.11 Aligned_cols=21 Identities=19% Similarity=0.382 Sum_probs=14.0
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
...|++||...... .-|..|.
T Consensus 2 ~~~C~~C~k~f~~~---~~l~~H~ 22 (29)
T 1rik_A 2 KFACPECPKRFMRS---DHLTLHI 22 (29)
T ss_dssp CEECSSSSCEESCS---HHHHHHH
T ss_pred CccCCCCCchhCCH---HHHHHHH
Confidence 36799999765543 3466665
No 27
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=53.78 E-value=19 Score=34.91 Aligned_cols=48 Identities=10% Similarity=0.212 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
.++..|..+.+.+-++|-+|...| +++..+++++..|+.+.+.|++++
T Consensus 45 ~~~~~l~~~~n~~sk~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 92 (455)
T 2dq0_A 45 KEINRLRHERNKIAVEIGKRRKKG--EPVDELLAKSREIVKRIGELENEV 92 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSC--CCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666666666555555 245666677777766666665443
No 28
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=53.23 E-value=3.8 Score=32.81 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=23.9
Q ss_pred ccccccccccccccCCchHHHHhhhcccccccHH
Q 022656 140 KMALCEICGSFLVANDAAERTQSHISGKQHIGYG 173 (294)
Q Consensus 140 km~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlGy~ 173 (294)
...-|++|... ..+..=++.|+.||.|.--+
T Consensus 92 ~~~~C~~C~~~---f~s~~~~~~H~~gk~H~~~~ 122 (127)
T 1zu1_A 92 RSKCCPVCNMT---FSSPVVAESHYIGKTHIKNL 122 (127)
T ss_dssp TTTEETTTTEE---CSSHHHHHHHHTSHHHHHHH
T ss_pred CCeEcCCCCCE---eCCHHHHHHHHCCHHHHHHH
Confidence 34679999974 34678899999999996533
No 29
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=52.83 E-value=3.1 Score=31.66 Aligned_cols=14 Identities=57% Similarity=0.992 Sum_probs=9.7
Q ss_pred hhcccccccccccc
Q 022656 138 EKKMALCEICGSFL 151 (294)
Q Consensus 138 ~qkm~VCeVCGA~L 151 (294)
+-.|..|+|||+.|
T Consensus 5 ~~~~~~~PlCG~~L 18 (95)
T 2k5c_A 5 HHHMAKCPICGSPL 18 (95)
T ss_dssp ---CEECSSSCCEE
T ss_pred ccccccCCcCCCcc
Confidence 34688999999965
No 30
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=52.73 E-value=71 Score=24.00 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=43.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 022656 71 PISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQ 126 (294)
Q Consensus 71 ~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~ 126 (294)
.+.++..+.|.....-|+.|.++.+.+.++|+-.+.-.-..+++..+.....|..+
T Consensus 22 G~~~~lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~ 77 (90)
T 4b6x_A 22 GAGAALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRR 77 (90)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999987766666666655555555443
No 31
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=52.02 E-value=75 Score=26.16 Aligned_cols=20 Identities=25% Similarity=0.594 Sum_probs=14.0
Q ss_pred hccccccccccccccCCchHHHHh
Q 022656 139 KKMALCEICGSFLVANDAAERTQS 162 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~d 162 (294)
....+|++||..+. ..||.-
T Consensus 109 g~yg~C~~Cg~~Ip----~~Rl~a 128 (151)
T 1tjl_A 109 EDFGYCESCGVEIG----IRRLEA 128 (151)
T ss_dssp TCCSBCSSSSCBCC----HHHHHH
T ss_pred CCCceeCCCCCcch----HHHHhc
Confidence 35679999998864 455554
No 32
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=50.86 E-value=27 Score=34.33 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQ 126 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~ 126 (294)
+..|..+.+.+-++|-+|...|+ ++..+++++..|+.+...|+++
T Consensus 49 ~~~l~~~rn~~sk~i~~~k~~~~--~~~~l~~~~~~l~~~i~~le~~ 93 (485)
T 3qne_A 49 LDEHNKKLNSVQKEIGKRFKAKE--DAKDLIAEKEKLSNEKKEIIEK 93 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcc--cHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444443 3455666666666666665544
No 33
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=49.21 E-value=61 Score=22.19 Aligned_cols=41 Identities=24% Similarity=0.343 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Q 022656 83 LEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 123 (294)
Q Consensus 83 l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l 123 (294)
|.++|..+-.-|+++-..|++|+..-|-.-+-.|+.+...+
T Consensus 7 L~EQ~~~I~~~I~qAk~~~r~DEV~~Le~NLrEL~~ei~~~ 47 (51)
T 1yzm_A 7 LLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQ 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 45666666677778888899988877777676776665544
No 34
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=49.00 E-value=19 Score=23.47 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 022656 84 EEKIKNLLEQVETLGEAGKVDEAEALMRKVEI 115 (294)
Q Consensus 84 ~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~ 115 (294)
...|..+-++|..+-.+|+++.+-.|-.+++.
T Consensus 7 ~d~I~aiEQqiyvA~seGd~etv~~Le~QL~~ 38 (40)
T 1gp8_A 7 AANKDAIRKQMDAAASKGDVETYRKLKAKLKG 38 (40)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 34577777888999999999998777666543
No 35
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=48.93 E-value=5.7 Score=26.41 Aligned_cols=28 Identities=25% Similarity=0.565 Sum_probs=19.7
Q ss_pred hccccccccccccccCCchHHHHhhhcc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISG 166 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~G 166 (294)
-...||+-||..+++.---.=|+.|-.|
T Consensus 15 ~~YRvC~~CgkPi~lsAIvdHLenhC~~ 42 (44)
T 2lo3_A 15 IQYRVCEKCGKPLALTAIVDHLENHCAG 42 (44)
T ss_dssp CCEEECTTTCCEEETTTHHHHHHHCCTT
T ss_pred ccchhhcccCCcchHHHHHHHHHHHhcc
Confidence 4569999999999887644445555443
No 36
>1xwm_A PHOU, phosphate uptake regulator; negative phosphate uptake regulator, structural genomics, protein structure initiative, PSI; 2.50A {Geobacillus stearothermophilus} SCOP: a.7.12.1
Probab=48.28 E-value=61 Score=27.06 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccc--cccccccCC
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEI--CGSFLVAND 155 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeV--CGA~Ls~~D 155 (294)
..|..+...+..++..+-..-..++++.|..+...-+.+-.....+...+ -.. + .-..|.+ |-.|+.+..
T Consensus 117 ~~l~~m~~~v~~~l~~a~~a~~~~d~~~A~~v~~~d~~iD~l~~~~~~~~-~~~--~-----~~~~~~~~~~~~~~~i~~ 188 (217)
T 1xwm_A 117 GPLVLMYRLATDMVSTAIAAYDREDASLAAQIADMDHRVDEQYGEMMASL-LAV--A-----KTDAATLAQMNVLALVAR 188 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHH-HSC--C-----CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--H-----HhCcccHHHHHHHHHHHH
Confidence 46888899999999999888889999888776654443333322232221 000 0 0113433 334566778
Q ss_pred chHHHHhhhc
Q 022656 156 AAERTQSHIS 165 (294)
Q Consensus 156 ~d~Rl~dH~~ 165 (294)
+-.|++||..
T Consensus 189 ~lERI~Dha~ 198 (217)
T 1xwm_A 189 YIERTADHAT 198 (217)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8899999975
No 37
>1z0k_B FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB gtpases, effector complex, vesicular trafficking, protein transport; HET: GTP MES; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=45.75 E-value=68 Score=23.31 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 123 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l 123 (294)
=|.++|..+-.-|+++-..|+.|+..-|-.-+-+|+.+...+
T Consensus 24 PL~EQ~~~I~~yI~qAk~~~r~DEV~tLe~NLrEL~~ei~~~ 65 (69)
T 1z0k_B 24 PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYDQQ 65 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777788888899888777766666666655443
No 38
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=45.71 E-value=14 Score=19.40 Aligned_cols=14 Identities=14% Similarity=0.233 Sum_probs=10.2
Q ss_pred cccccccccccccC
Q 022656 141 MALCEICGSFLVAN 154 (294)
Q Consensus 141 m~VCeVCGA~Ls~~ 154 (294)
...|++||......
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 2 EHKCPHCDKKFNQV 15 (29)
T ss_dssp CCCCSSCCCCCCTT
T ss_pred CCcCCCCCcccCCH
Confidence 46799999765544
No 39
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=45.60 E-value=71 Score=26.71 Aligned_cols=80 Identities=11% Similarity=0.059 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccccc--ccccccccCC
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCE--ICGSFLVAND 155 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCe--VCGA~Ls~~D 155 (294)
..|..+...+..++..+-.+-..++++.|..+...-+.+...-..+...+ -. .+ .+ ..|+ .+-.|+.+..
T Consensus 121 ~el~~m~~~v~~ml~~a~~a~~~~d~~~a~~v~~~d~~iD~l~~~i~~~~-~~--~~--~~---~~~~~~~~~~~~~i~~ 192 (227)
T 1t72_A 121 VNINFMSEIVKEMVNDSVISFIQQDTLLAKKVIEKDDTVDELYHQLEREL-MT--YV--LE---DPRNIKRAMHLSFVAR 192 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HH--HH---CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HH--HH---CcchHHHHHHHHHHHH
Confidence 56778888888899988888889998877666654333322222222221 00 00 11 2344 3445666778
Q ss_pred chHHHHhhhc
Q 022656 156 AAERTQSHIS 165 (294)
Q Consensus 156 ~d~Rl~dH~~ 165 (294)
+-.|++||..
T Consensus 193 ~lERIgDha~ 202 (227)
T 1t72_A 193 HYERIADHAE 202 (227)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999999987
No 40
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=45.13 E-value=7.3 Score=20.83 Aligned_cols=21 Identities=24% Similarity=0.570 Sum_probs=13.4
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
..+|++||.-.... .-|..|.
T Consensus 2 ~~~C~~C~~~f~~~---~~l~~H~ 22 (29)
T 1ard_A 2 SFVCEVCTRAFARQ---EHLKRHY 22 (29)
T ss_dssp CCBCTTTCCBCSSH---HHHHHHH
T ss_pred CeECCCCCcccCCH---HHHHHHH
Confidence 46899999765543 3455554
No 41
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=44.84 E-value=1.6e+02 Score=25.78 Aligned_cols=54 Identities=22% Similarity=0.342 Sum_probs=45.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 73 SAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 73 ~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
...+...|..+++.|..|...+++|- +|+..+|..+...|..|......|...+
T Consensus 167 ~e~ie~dL~~~e~~i~~l~~~a~~L~-~~~y~~a~~i~~r~~~l~~~w~~L~~~~ 220 (235)
T 2odv_A 167 AGEVERDLDKADSMIRLLFNDVQTLK-DGRHPQGEQMYRRVYRLHKRLVAIRTEY 220 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567789999999999999999985 5667788899999999999998887766
No 42
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=44.72 E-value=12 Score=19.69 Aligned_cols=25 Identities=20% Similarity=0.414 Sum_probs=15.7
Q ss_pred ccccccccccccCCchHHHHhhhccccccc
Q 022656 142 ALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+|++||.-.... .-|..|. +.|.|
T Consensus 2 ~~C~~C~k~f~~~---~~l~~H~--~~h~~ 26 (27)
T 1znf_A 2 YKCGLCERSFVEK---SALSRHQ--RVHKN 26 (27)
T ss_dssp CBCSSSCCBCSSH---HHHHHHG--GGTCC
T ss_pred ccCCCCCCcCCCH---HHHHHHH--HHcCC
Confidence 4799999765432 4466675 45544
No 43
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=43.75 E-value=5.5 Score=23.63 Aligned_cols=22 Identities=14% Similarity=0.385 Sum_probs=14.8
Q ss_pred ccccccccccccccCCchHHHHhhh
Q 022656 140 KMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 140 km~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
+..+|++||...... .-|..|.
T Consensus 5 k~~~C~~C~k~f~~~---~~L~~H~ 26 (39)
T 1njq_A 5 RSYTCSFCKREFRSA---QALGGHM 26 (39)
T ss_dssp SSEECTTTCCEESSH---HHHHHHH
T ss_pred CceECCCCCcccCCH---HHHHHHH
Confidence 557899999865543 4455564
No 44
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=43.68 E-value=6.9 Score=24.69 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=17.2
Q ss_pred ccccccccccccCCchHHHHhhhc
Q 022656 142 ALCEICGSFLVANDAAERTQSHIS 165 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~Rl~dH~~ 165 (294)
.+|++|.+.|. +...|..||.
T Consensus 6 FiCP~C~~~l~---s~~~L~~Hye 26 (34)
T 3mjh_B 6 FICPQCMKSLG---SADELFKHYE 26 (34)
T ss_dssp EECTTTCCEES---SHHHHHHHHH
T ss_pred cCCcHHHHHcC---CHHHHHHHHH
Confidence 78999998876 4578999984
No 45
>1td6_A F10_ORF294, hypothetical protein Mg237 homolog; alpha helical, structural genomics, PSI, protein structure initiative; 2.50A {Mycoplasma pneumoniae} SCOP: a.234.1.1
Probab=43.40 E-value=1.4e+02 Score=26.98 Aligned_cols=70 Identities=14% Similarity=0.301 Sum_probs=45.4
Q ss_pred CCCCCCccccccCChh-HHHHhhcC-CCCCCChhhHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCCCCCCCCchhh
Q 022656 1 MINHLDCIPVKMCYYV-CDCSFEKS-PRHDAYVPKFEAELAQFCEKLVMDLDRR-VRRGRERLSQEVEPAPPPPISAEK 76 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~-lK~~Ye~~-~~~~~~~~~YE~e~l~~L~~lI~d~dRk-I~~~k~RL~~~~e~~~~~~~~~~~ 76 (294)
.+|||||+-.-..+|. |++.|..- +..+.-++.| |+..|.+++..|+.| +..|+.+++++ ..++-.+.+.
T Consensus 20 f~nhl~~lk~hf~~y~~l~~~f~~y~~~~~deLt~f---y~n~l~ki~~lvk~Kdfk~Ale~~eEE---LdtpYlp~~l 92 (306)
T 1td6_A 20 FVNHLSALKKHFASYKELREAFNDYHKHNGDELTTF---FLHQFDKVMELVKQKDFKTAQSRCEEE---LAAPYLPKPL 92 (306)
T ss_dssp SSTTCSBCCCCCSSHHHHHHHHHHHHTTTCSSHHHH---HHHHHHHHHHHHHTTCHHHHHHHHHHH---TTCTTSCHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHcCchhHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHHHH---hcCCcccHHH
Confidence 3689999887777765 78777653 3333333333 566667777777654 99999999754 3344455544
No 46
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=43.14 E-value=8.9 Score=21.95 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=16.2
Q ss_pred cccccccccccccCCchHHHHhhhccccccc
Q 022656 141 MALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
...|++||.-.+.. .-|..|+ ++|.|
T Consensus 2 p~~C~~C~k~F~~~---~~L~~H~--~~H~~ 27 (33)
T 1rim_A 2 KFACPECPKRFMRS---DHLSKHI--TLHEL 27 (33)
T ss_dssp CCCCSSSCCCCSSH---HHHHHHH--HHHTT
T ss_pred cccCCCCCchhCCH---HHHHHHH--HHhCC
Confidence 36899999865543 3466665 24544
No 47
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.13 E-value=12 Score=23.00 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=19.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|. +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCS---KYLTQHE--RIHTR 37 (46)
T ss_dssp SCCEECSSSCCEESSS---HHHHHHH--TTCCS
T ss_pred CCCEECcCCCCcCCCH---HHHHHHH--HHcCC
Confidence 4568999999865544 4566775 45654
No 48
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.05 E-value=11 Score=22.59 Aligned_cols=28 Identities=25% Similarity=0.477 Sum_probs=18.6
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (44)
T 2en7_A 10 MKPYVCNECGKAFRSK---SYLIIHT--RTHTG 37 (44)
T ss_dssp SSSSCCTTTCCCCSSH---HHHHHHH--TTTCC
T ss_pred CcCeECCCCCCccCCH---HHHHHHh--hhcCC
Confidence 4568999999865543 4566676 45654
No 49
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=42.62 E-value=48 Score=32.62 Aligned_cols=51 Identities=22% Similarity=0.188 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 77 SEQLSVLEEKIKNLLEQVETLGEAGK------VDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 77 ~e~i~~l~ekI~~ll~eaE~LGeeG~------VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
..++..|..+.+.+-++|-++...|+ -+++..+++++..|+.+...|++++
T Consensus 83 ~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~ 139 (501)
T 1wle_A 83 REQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQLTLLYPKE 139 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666666666665554442 1466778888888888777776543
No 50
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=42.11 E-value=16 Score=22.27 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=14.3
Q ss_pred hccccccccccccccCCchH
Q 022656 139 KKMALCEICGSFLVANDAAE 158 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~ 158 (294)
.+...|++||.-.....+-.
T Consensus 10 ~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSALN 29 (46)
T ss_dssp CCSBCCSSSCCCBSSTTHHH
T ss_pred CCCcccCccCcccCCHHHHH
Confidence 46689999998766654433
No 51
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=41.42 E-value=13 Score=21.37 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=17.5
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||..... ..-|..|. +.|.|
T Consensus 9 ~k~~~C~~C~k~f~~---~~~l~~H~--~~H~~ 36 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSR---SDHLALHR--KRHML 36 (37)
T ss_dssp SSSBCCTTTCCCBSS---HHHHHHHH--GGGTC
T ss_pred CCCccCCCCCcccCc---HHHHHHHH--HHhcc
Confidence 467899999975443 24466664 34543
No 52
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=40.43 E-value=11 Score=20.07 Aligned_cols=21 Identities=19% Similarity=0.513 Sum_probs=14.1
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
...|++||.-.+. ..-|..|.
T Consensus 3 ~~~C~~C~k~f~~---~~~l~~H~ 23 (28)
T 2kvf_A 3 PYSCSVCGKRFSL---KHQMETHY 23 (28)
T ss_dssp SEECSSSCCEESC---HHHHHHHH
T ss_pred CccCCCCCcccCC---HHHHHHHH
Confidence 4679999976543 34566675
No 53
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=40.30 E-value=63 Score=25.95 Aligned_cols=47 Identities=17% Similarity=0.263 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLT 124 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~ 124 (294)
.+|..|+.+++.+--+...+-..|+.+-.-.+..+++.|..+.+.|.
T Consensus 10 ~Eiq~L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~~lk 56 (123)
T 2lf0_A 10 NEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLR 56 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555555555555555555555554444
No 54
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=39.77 E-value=6.9 Score=27.85 Aligned_cols=14 Identities=21% Similarity=0.752 Sum_probs=9.4
Q ss_pred hccccccccccccc
Q 022656 139 KKMALCEICGSFLV 152 (294)
Q Consensus 139 qkm~VCeVCGA~Ls 152 (294)
-+|.+|..||.|-.
T Consensus 3 s~mr~C~~Cg~YTL 16 (60)
T 2aus_D 3 FRIRKCPKCGRYTL 16 (60)
T ss_dssp -CCEECTTTCCEES
T ss_pred ccceECCCCCCEEc
Confidence 36778888887744
No 55
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=39.60 E-value=1.1e+02 Score=22.68 Aligned_cols=28 Identities=11% Similarity=0.159 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022656 35 EAELAQFCEKLVMDLDRRVRRGRERLSQ 62 (294)
Q Consensus 35 E~e~l~~L~~lI~d~dRkI~~~k~RL~~ 62 (294)
+..=|.-|..-|..++.+|..-...|+.
T Consensus 20 eqrEle~le~~Ie~LE~~i~~le~~lad 47 (89)
T 2lw1_A 20 LQRELEQLPQLLEDLEAKLEALQTQVAD 47 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4444677888899999999988888853
No 56
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=39.05 E-value=8.4 Score=24.79 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 22 ~k~~~C~~C~k~f~~~---~~L~~H~ 44 (54)
T 1yui_A 22 EQPATCPICYAVIRQS---RNLRRHL 44 (54)
T ss_dssp SCCEECTTTCCEESSH---HHHHHHH
T ss_pred CCCccCCCCCcccCCH---HHHHHHH
Confidence 4678999999865543 3455554
No 57
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.03 E-value=11 Score=22.48 Aligned_cols=23 Identities=26% Similarity=0.385 Sum_probs=15.2
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 8 ~k~~~C~~C~k~f~~~---~~L~~H~ 30 (42)
T 2yte_A 8 EKPYSCAECKETFSDN---NRLVQHQ 30 (42)
T ss_dssp CCSCBCTTTCCBCSSH---HHHHHHH
T ss_pred CCCeECCCCCCccCCH---HHHHHHH
Confidence 4668999999865543 3455554
No 58
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=39.02 E-value=8.7 Score=24.93 Aligned_cols=26 Identities=31% Similarity=0.567 Sum_probs=17.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
....+|+-||..+.+.+-++=.+=||
T Consensus 7 ~~~~~C~~C~~~i~~~~~~EH~D~H~ 32 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWDMPEHMDYHF 32 (39)
T ss_dssp CCEEECTTTCCEEEGGGHHHHHHHHH
T ss_pred CCCcccccccCcCCcccccchhhHHH
Confidence 34578999999988765444344443
No 59
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=38.76 E-value=7.9 Score=25.99 Aligned_cols=10 Identities=30% Similarity=0.707 Sum_probs=8.0
Q ss_pred cccccccccc
Q 022656 142 ALCEICGSFL 151 (294)
Q Consensus 142 ~VCeVCGA~L 151 (294)
-+|+||||--
T Consensus 31 w~CP~Cg~~k 40 (46)
T 6rxn_A 31 WCCPVCGVSK 40 (46)
T ss_dssp CBCTTTCCBG
T ss_pred CcCcCCCCcH
Confidence 3999999853
No 60
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=38.53 E-value=23 Score=18.85 Aligned_cols=21 Identities=14% Similarity=0.363 Sum_probs=13.8
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
...|++||...... .-|..|+
T Consensus 2 ~~~C~~C~k~f~~~---~~l~~H~ 22 (30)
T 1paa_A 2 AYACGLCNRAFTRR---DLLIRHA 22 (30)
T ss_dssp CSBCTTTCCBCSSS---HHHHHHH
T ss_pred CcCCcccCcccCCh---HHHHHHH
Confidence 36799999765543 4466673
No 61
>1e52_A Excinuclease ABC subunit; DNA excision repair, UVRB, DNA repair, UVRC binding domain; NMR {Escherichia coli} SCOP: a.2.9.1 PDB: 1qoj_A
Probab=38.52 E-value=63 Score=22.91 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVE 119 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~e 119 (294)
++...|..|.++..++.++-+.++|..+=.++..|+.+
T Consensus 21 ~~~~~i~~Le~~M~~AA~~leFE~AA~lRD~I~~L~~~ 58 (63)
T 1e52_A 21 ALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLREL 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 45677888889999999999999999988888888754
No 62
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=44.65 E-value=6.6 Score=21.21 Aligned_cols=14 Identities=14% Similarity=0.297 Sum_probs=10.1
Q ss_pred cccccccccccccC
Q 022656 141 MALCEICGSFLVAN 154 (294)
Q Consensus 141 m~VCeVCGA~Ls~~ 154 (294)
..+|++||......
T Consensus 3 ~~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 3 PYVCIHCQRQFADP 16 (30)
Confidence 46899999765543
No 63
>1z0j_B FYVE-finger-containing RAB5 effector protein RABE, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Homo sapiens} SCOP: a.2.19.1
Probab=38.30 E-value=1e+02 Score=21.69 Aligned_cols=43 Identities=21% Similarity=0.309 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLT 124 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~ 124 (294)
-|.++|..+-.-|.++-..|..|+..-|-.-+-.|+.+...++
T Consensus 13 pL~EQi~~I~~yI~qAk~~~R~DEV~~Le~NLrEL~~ei~~~~ 55 (59)
T 1z0j_B 13 LLLQQIDNIKAYIFDAKQCGRLDEVEVLTENLRELKHTLAKQK 55 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777777788888899999998887777777776665443
No 64
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=38.27 E-value=9.5 Score=30.85 Aligned_cols=30 Identities=17% Similarity=0.493 Sum_probs=24.5
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|.+||.+.+. ..=|..|+.+|.|..
T Consensus 48 ekpfyC~~C~K~F~~---~~~L~~H~rsK~HKr 77 (124)
T 1zr9_A 48 GGLHRCLACARYFID---STNLKTHFRSKDHKK 77 (124)
T ss_dssp GGCSEETTTTEECSS---HHHHHHHTTCHHHHH
T ss_pred CcceEcccCcchhCC---HHHHHHHHhhhhhhH
Confidence 467999999988664 466899999999954
No 65
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.88 E-value=12 Score=22.69 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|.
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (44)
T 2eou_A 10 KTTSECQECGKIFRHS---SLLIEHQ 32 (44)
T ss_dssp SCCCCCTTTCCCCSSH---HHHHHHH
T ss_pred CcCeECCCCCcccCCH---HHHHHHH
Confidence 4668999999765543 3355554
No 66
>3r8n_T 30S ribosomal protein S20; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_T 3fih_T* 3j18_T* 2wwl_T 3oar_T 3oaq_T 3ofb_T 3ofa_T 3ofp_T 3ofx_T 3ofy_T 3ofo_T 3r8o_T 4a2i_T 4gd1_T 4gd2_T 2qal_T* 1p6g_T 1p87_T 2aw7_T ...
Probab=37.42 E-value=63 Score=24.26 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILN 117 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk 117 (294)
.+-..|...+.+++.+.+.|+.++|+.++..+...-
T Consensus 21 ~~kS~~rT~iKk~~~Ai~~gd~~~A~~~l~~a~~~i 56 (85)
T 3r8n_T 21 SRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIV 56 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 445667778889999999999999999998777664
No 67
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=37.35 E-value=7.9 Score=22.03 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=16.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 5 ~k~~~C~~C~k~f~~~---~~l~~H~ 27 (35)
T 1srk_A 5 KRPFVCRICLSAFTTK---ANCARHL 27 (35)
T ss_dssp CSCEECSSSCCEESSH---HHHHHHH
T ss_pred CcCeeCCCCCcccCCH---HHHHHHH
Confidence 4568999999876543 4466665
No 68
>2r6a_C DNAG primase, helicase binding domain, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_G 1z8s_A*
Probab=37.14 E-value=78 Score=24.22 Aligned_cols=37 Identities=5% Similarity=-0.115 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 022656 83 LEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVE 119 (294)
Q Consensus 83 l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~e 119 (294)
+..++..+..++..++..|+++++..++.++..|+.+
T Consensus 103 ~~r~l~~~~~~i~~~~~~~d~~~~l~~~~el~~l~~~ 139 (143)
T 2r6a_C 103 KWLMLKVKEQEKTEAERRKDFLTAARIAKEMIEMKKM 139 (143)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence 3456667777888888899999999888887777654
No 69
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=37.11 E-value=7.1 Score=20.91 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=14.3
Q ss_pred ccccccccccccccCCchHHHHhhh
Q 022656 140 KMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 140 km~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
+...|++||..... ..-|..|+
T Consensus 2 k~~~C~~C~~~f~~---~~~l~~H~ 23 (30)
T 2m0d_A 2 KPYQCDYCGRSFSD---PTSKMRHL 23 (30)
T ss_dssp CCEECTTTCCEESC---HHHHHHHH
T ss_pred cCccCCCCCcccCC---HHHHHHHH
Confidence 45689999976543 24466665
No 70
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=37.06 E-value=13 Score=25.51 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=19.6
Q ss_pred hhccccccccccccccCCchHHHHhhhccccccc
Q 022656 138 EKKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 138 ~qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
..+..+|++||.-.+.. .-|..|. ++|.|
T Consensus 29 ~ekp~~C~~C~k~F~~~---~~L~~H~--~~Htg 57 (60)
T 4gzn_C 29 GYRPRSCPECGKCFRDQ---SEVNRHL--KVHQN 57 (60)
T ss_dssp TCCCEECTTTCCEESSH---HHHHHHG--GGGSC
T ss_pred CCcCeECCCCCCCcCCH---HHHHHHh--CccCC
Confidence 35678899999765543 4577775 56765
No 71
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=36.81 E-value=1.2e+02 Score=22.14 Aligned_cols=50 Identities=14% Similarity=0.074 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 77 SEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 77 ~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
...|....++|..+...++.|.+.|-.+ |..+...++.|......|....
T Consensus 49 e~~~~~~~~~i~~l~~~a~~L~~~~h~~-~~~I~~r~~~l~~~w~~L~~~~ 98 (107)
T 2spc_A 49 DKAINGHEQKIAALQTVADQLIAQNHYA-SNLVDEKRKQVLERWRHLKEGL 98 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4457788889999999999998888664 6678888888888777776544
No 72
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=35.64 E-value=1.7e+02 Score=31.43 Aligned_cols=51 Identities=16% Similarity=0.177 Sum_probs=27.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 76 KSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 76 ~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
..++|..++++|.++.++.+.|-+.-.--. ..+-.+|..|+.+...|+++.
T Consensus 989 L~~e~~~l~~~~~~~~ke~~~lee~~~~~~-~~L~~kv~~L~~e~~~L~qq~ 1039 (1080)
T 2dfs_A 989 LQEEIAKLRKELHQTQTEKKTIEEWADKYK-HETEQLVSELKEQNTLLKTEK 1039 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555533221111 344466666777776676665
No 73
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.60 E-value=9.8 Score=20.17 Aligned_cols=21 Identities=19% Similarity=0.491 Sum_probs=12.6
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
..+|++||...... .-|..|.
T Consensus 2 ~~~C~~C~k~f~~~---~~l~~H~ 22 (29)
T 2m0f_A 2 PLKCRECGKQFTTS---GNLKRHL 22 (29)
T ss_dssp CEECTTTSCEESCH---HHHHHHH
T ss_pred CccCCCCCCccCCh---hHHHHHH
Confidence 46799999754432 3344553
No 74
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.57 E-value=10 Score=23.21 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=15.1
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2yto_A 10 EKPYKCSDCGKAFTRK---SGLHIHQ 32 (46)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH
T ss_pred CCCEECcccCCccCCH---hHHHHHH
Confidence 4668999999865544 3344453
No 75
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=41.80 E-value=7.8 Score=20.44 Aligned_cols=13 Identities=38% Similarity=0.771 Sum_probs=9.3
Q ss_pred ccccccccccccc
Q 022656 141 MALCEICGSFLVA 153 (294)
Q Consensus 141 m~VCeVCGA~Ls~ 153 (294)
...|++||.-...
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 4689999975443
No 76
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=35.00 E-value=9.8 Score=26.40 Aligned_cols=9 Identities=33% Similarity=0.885 Sum_probs=7.7
Q ss_pred ccccccccc
Q 022656 142 ALCEICGSF 150 (294)
Q Consensus 142 ~VCeVCGA~ 150 (294)
-||+||||-
T Consensus 37 w~CP~Cg~~ 45 (54)
T 4rxn_A 37 WVCPLCGVG 45 (54)
T ss_dssp CBCTTTCCB
T ss_pred CcCcCCCCc
Confidence 499999985
No 77
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=35.00 E-value=14 Score=22.63 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2emk_A 10 EKPYECKECGKAFSQT---THLIQHQ 32 (46)
T ss_dssp SCSCBCSSSCCBCSCH---HHHHHHH
T ss_pred CCceECCCCCchhCCH---HHHHHHH
Confidence 4668999999765543 3455554
No 78
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=34.95 E-value=18 Score=19.09 Aligned_cols=14 Identities=14% Similarity=0.273 Sum_probs=10.1
Q ss_pred cccccccccccccC
Q 022656 141 MALCEICGSFLVAN 154 (294)
Q Consensus 141 m~VCeVCGA~Ls~~ 154 (294)
...|++||......
T Consensus 2 ~~~C~~C~k~f~~~ 15 (30)
T 1klr_A 2 TYQCQYCEFRSADS 15 (30)
T ss_dssp CCCCSSSSCCCSCS
T ss_pred CccCCCCCCccCCH
Confidence 36799999765543
No 79
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.78 E-value=14 Score=22.57 Aligned_cols=23 Identities=22% Similarity=0.314 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-..... -|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~~---~L~~H~ 32 (46)
T 2en3_A 10 EKPFQCKECGMNFSWSC---SLFKHL 32 (46)
T ss_dssp CCSEECSSSCCEESSSH---HHHHHH
T ss_pred CCCeeCcccChhhCCHH---HHHHHH
Confidence 46789999998766543 344454
No 80
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.38 E-value=13 Score=21.13 Aligned_cols=23 Identities=30% Similarity=0.635 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|.
T Consensus 7 ~~~~~C~~C~k~f~~~---~~l~~H~ 29 (36)
T 2elr_A 7 GKTHLCDMCGKKFKSK---GTLKSHK 29 (36)
T ss_dssp CSSCBCTTTCCBCSSH---HHHHHHH
T ss_pred CCCeecCcCCCCcCch---HHHHHHH
Confidence 4668999999765433 4455554
No 81
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.37 E-value=8.3 Score=23.31 Aligned_cols=28 Identities=29% Similarity=0.496 Sum_probs=18.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (44)
T 2eoj_A 10 ENPYECCECGKVFSRK---DQLVSHQ--KTHSG 37 (44)
T ss_dssp CCSCEETTTTEECSSH---HHHHHHH--TTSSS
T ss_pred CcCeeCCCCCCccCCH---HHHHHHH--HHcCC
Confidence 4678999999765543 4566664 34544
No 82
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.12 E-value=14 Score=22.38 Aligned_cols=23 Identities=26% Similarity=0.384 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-... ..-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~---~~~L~~H~ 32 (46)
T 2eov_A 10 EKPYKCSDCGKSFTW---KSRLRIHQ 32 (46)
T ss_dssp CCSCBCSSSCCBCSS---HHHHHHHH
T ss_pred CCCccCCccChhhCC---HHHHHHHH
Confidence 466899999976543 34566664
No 83
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=34.09 E-value=1.8e+02 Score=23.99 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNV 118 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~ 118 (294)
.+...|..++++++.+-..|++++|..++.++-=+..
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~d~~~A~~~~~kL~f~~k 160 (174)
T 3hho_A 124 KVTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAK 160 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 5666777778888888888999988777666544433
No 84
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.07 E-value=13 Score=22.66 Aligned_cols=23 Identities=26% Similarity=0.494 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQN---SHLARHR 32 (46)
T ss_dssp CSSEECSSSCCEESSS---HHHHHHT
T ss_pred CCCeECCcCCchhCCH---HHHHHHH
Confidence 4678999999866654 3344453
No 85
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=34.00 E-value=1.7e+02 Score=24.54 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 123 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l 123 (294)
...+.+.|..++++++.+-..|+.++|..++.++-=+..-...+
T Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~d~~~A~~~~~kL~y~~kl~~~i 170 (181)
T 3uo3_A 127 EKQNKERIQDIEAQLGQCYNDKDYAAAVKLTVELKYWYNLAKAF 170 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34577788888888899999999999988777766555444444
No 86
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.87 E-value=10 Score=22.53 Aligned_cols=28 Identities=29% Similarity=0.527 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|+ +.|.|
T Consensus 9 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 36 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQ---KGSLIVHI--RVHTG 36 (42)
T ss_dssp CCSBCCTTTTCCBSS---HHHHHTTG--GGTSC
T ss_pred CCCeeCCCccchhCC---HHHHHHHH--HHhCC
Confidence 466899999976553 34466665 34544
No 87
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=33.68 E-value=9.9 Score=27.02 Aligned_cols=11 Identities=36% Similarity=1.044 Sum_probs=6.7
Q ss_pred ccccccccccc
Q 022656 140 KMALCEICGSF 150 (294)
Q Consensus 140 km~VCeVCGA~ 150 (294)
+|.+|..||.|
T Consensus 5 ~mr~C~~CgvY 15 (60)
T 2apo_B 5 RMKKCPKCGLY 15 (60)
T ss_dssp CCEECTTTCCE
T ss_pred hceeCCCCCCE
Confidence 45666666655
No 88
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=33.65 E-value=2.4e+02 Score=24.57 Aligned_cols=14 Identities=43% Similarity=0.895 Sum_probs=6.8
Q ss_pred cccccccccccccC
Q 022656 141 MALCEICGSFLVAN 154 (294)
Q Consensus 141 m~VCeVCGA~Ls~~ 154 (294)
+-+|+-||.+|+..
T Consensus 222 Iv~Cp~CgRIL~~~ 235 (256)
T 3na7_A 222 MITCPYCGRILYAE 235 (256)
T ss_dssp CEECTTTCCEEECS
T ss_pred EEECCCCCeeEEeC
Confidence 34555555555533
No 89
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=33.62 E-value=11 Score=22.38 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|.
T Consensus 9 ~~~~~C~~C~k~f~~~---~~l~~H~ 31 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQR---GSLAVHQ 31 (42)
T ss_dssp SCCEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeECCCCCcccCCH---HHHHHHh
Confidence 4568999999866543 3455554
No 90
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=33.56 E-value=1.4e+02 Score=27.96 Aligned_cols=8 Identities=25% Similarity=0.555 Sum_probs=3.5
Q ss_pred cccccccc
Q 022656 146 ICGSFLVA 153 (294)
Q Consensus 146 VCGA~Ls~ 153 (294)
|+||+++.
T Consensus 313 lAgal~~~ 320 (426)
T 1lrz_A 313 ISAGFFFI 320 (426)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 44444443
No 91
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=33.46 E-value=3.3e+02 Score=26.07 Aligned_cols=22 Identities=32% Similarity=0.333 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 022656 106 AEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 106 A~~l~~~ve~Lk~er~~l~~~~ 127 (294)
+.+.+++.+.|+.++..++...
T Consensus 532 ~~~~~~~~~~~~~~~~~le~~~ 553 (597)
T 3oja_B 532 ADAKQKETEDLEQENIALEKQL 553 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcchhhHHhhhHHHHHHH
Confidence 4455566666666666665544
No 92
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=33.41 E-value=57 Score=30.62 Aligned_cols=26 Identities=27% Similarity=0.344 Sum_probs=20.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHH
Q 022656 93 QVETLGEAGKVDEAEALMRKVEILNV 118 (294)
Q Consensus 93 eaE~LGeeG~VdeA~~l~~~ve~Lk~ 118 (294)
.|-.|..+|+++||+++......++.
T Consensus 117 ~a~~la~~g~l~eAkk~a~~~~~~r~ 142 (347)
T 3u8p_A 117 DALKLANEGKVKEAQAAAEQLKTTRN 142 (347)
T ss_dssp HHHHHHHTTCHHHHHHHHHTHHHHHH
T ss_pred HHHHhhhccchHHHHHHHHHhHhHHH
Confidence 67789999999999987765555543
No 93
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.37 E-value=12 Score=22.79 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=15.1
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eor_A 10 EKPYNCEECGKAFIHD---SQLQEHQ 32 (46)
T ss_dssp CCSEECTTTCCEESSH---HHHHHHH
T ss_pred CcCccCCCCCCCcCCH---HHHHHHH
Confidence 4668999999876544 3344453
No 94
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.04 E-value=16 Score=22.35 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=18.7
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||..... ..-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2em5_A 10 TKSHQCHECGRGFTL---KSHLNQHQ--RIHTG 37 (46)
T ss_dssp SCSEECSSSCCEESS---HHHHHHHH--TTTSC
T ss_pred CCCeECCcCCCccCC---HHHHHHHH--HHhCC
Confidence 466899999976543 35577775 44554
No 95
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=39.18 E-value=9.1 Score=20.61 Aligned_cols=21 Identities=19% Similarity=0.524 Sum_probs=12.7
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
...|++||...... .-|..|.
T Consensus 2 ~~~C~~C~k~f~~~---~~l~~H~ 22 (29)
T 2lvt_A 2 PCQCVMCGKAFTQA---SSLIAHV 22 (29)
Confidence 36799999765433 2245554
No 96
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.89 E-value=16 Score=22.13 Aligned_cols=23 Identities=13% Similarity=0.349 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~---~~L~~H~ 30 (43)
T 2yrm_A 8 NGAFFCNECDCRFSEE---ASLKRHT 30 (43)
T ss_dssp SCCBCCSSSCCCBSSH---HHHHHHH
T ss_pred CCCEECCCCCCeeCCh---HHHHHHH
Confidence 4668999999876544 3355554
No 97
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=32.74 E-value=12 Score=22.83 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=15.2
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2emj_A 10 EKPFECAECGKSFSIS---SQLATHQ 32 (46)
T ss_dssp CCSEECSSSSCEESSH---HHHHHHH
T ss_pred CCCEECCCCCcccCCH---HHHHHHH
Confidence 4568999999865543 3355554
No 98
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=32.69 E-value=11 Score=22.46 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~---~~L~~H~ 30 (42)
T 2el5_A 8 ENPYECSECGKAFNRK---DQLISHQ 30 (42)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCccCCCcChhhCCH---HHHHHHH
Confidence 4668999999865544 3455665
No 99
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.67 E-value=12 Score=22.85 Aligned_cols=23 Identities=17% Similarity=0.372 Sum_probs=15.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRH---SHLIEHL 32 (46)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH
T ss_pred CCCEEccccCcccCCH---HHHHHHH
Confidence 4668999999865544 3344453
No 100
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.62 E-value=14 Score=22.46 Aligned_cols=23 Identities=22% Similarity=0.369 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2epw_A 10 EKPCKCTECGKAFCWK---SQLIMHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSS---HHHHHHH
T ss_pred CCCeeCCCCCCccCCH---HHHHHHH
Confidence 4668999999866554 3455554
No 101
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.43 E-value=11 Score=22.94 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|.
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (44)
T 2epv_A 10 EKPYECNECGKAFIWK---SLLIVHE 32 (44)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CcCeECCCCCcccCch---HHHHHHH
Confidence 4668999999765443 4466665
No 102
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=32.39 E-value=10 Score=21.33 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|.
T Consensus 5 ~k~~~C~~C~k~f~~~---~~L~~H~ 27 (35)
T 2elx_A 5 SSGYVCALCLKKFVSS---IRLRSHI 27 (35)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeECCCCcchhCCH---HHHHHHH
Confidence 3568999999865543 3455564
No 103
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.26 E-value=12 Score=22.97 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=15.1
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2em4_A 10 QRPYECIECGKAFKTK---SSLICHR 32 (46)
T ss_dssp SSSEECSSSCCEESSH---HHHHHHH
T ss_pred CcCcCCCCCCCccCCH---HHHHHHH
Confidence 4668999999765543 3355553
No 104
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=32.17 E-value=11 Score=20.00 Aligned_cols=22 Identities=18% Similarity=0.289 Sum_probs=13.5
Q ss_pred ccccccccccccccCCchHHHHhhh
Q 022656 140 KMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 140 km~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
+...|++||.-... ..-|..|.
T Consensus 2 k~~~C~~C~k~f~~---~~~l~~H~ 23 (27)
T 2kvh_A 2 KPFSCSLCPQRSRD---FSAMTKHL 23 (27)
T ss_dssp CCEECSSSSCEESS---HHHHHHHH
T ss_pred cCccCCCcChhhCC---HHHHHHHH
Confidence 35689999975443 23455553
No 105
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.15 E-value=16 Score=21.00 Aligned_cols=15 Identities=13% Similarity=0.567 Sum_probs=11.2
Q ss_pred hcccccccccccccc
Q 022656 139 KKMALCEICGSFLVA 153 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~ 153 (294)
.+..+|++||.....
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (37)
T 2elp_A 7 GRAMKCPYCDFYFMK 21 (37)
T ss_dssp CCCEECSSSSCEECS
T ss_pred CCCeECCCCChhhcc
Confidence 456899999976544
No 106
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.02 E-value=17 Score=22.18 Aligned_cols=28 Identities=21% Similarity=0.463 Sum_probs=18.6
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2enh_A 10 EKPYECDVCRKAFSHH---ASLTQHQ--RVHSG 37 (46)
T ss_dssp SSSCBCTTTCCBCSSS---HHHHHHG--GGSCC
T ss_pred CCCcCCCCcCchhCCH---HHHHHHH--HHhCC
Confidence 4668999999866544 4466665 34544
No 107
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.95 E-value=15 Score=22.29 Aligned_cols=28 Identities=25% Similarity=0.516 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ep1_A 10 EKPYECSDCGKSFIKK---SQLHVHQ--RIHTG 37 (46)
T ss_dssp CCSSCCSSSCCCCSSH---HHHHHHH--GGGSS
T ss_pred CCCcCCCCCCchhCCH---HHHHHHH--HHhCC
Confidence 4668999999865543 4466665 24544
No 108
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=31.83 E-value=12 Score=25.64 Aligned_cols=8 Identities=38% Similarity=1.290 Sum_probs=7.2
Q ss_pred cccccccc
Q 022656 143 LCEICGSF 150 (294)
Q Consensus 143 VCeVCGA~ 150 (294)
||.||||-
T Consensus 37 ~CP~Cg~~ 44 (52)
T 1yk4_A 37 VCPLCGAP 44 (52)
T ss_dssp BCTTTCCB
T ss_pred cCCCCCCC
Confidence 89999984
No 109
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.80 E-value=16 Score=22.26 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=15.2
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2emz_A 10 ERPFKCNECGKGFGRR---SHLAGHL 32 (46)
T ss_dssp CCSCCCSSSCCCCSSH---HHHHHHH
T ss_pred CCCeECCCCCcccCCH---HHHHHHH
Confidence 4668999999876544 3344453
No 110
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.59 E-value=13 Score=22.32 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (44)
T 2eof_A 10 EKPYECNECQKAFNTK---SNLMVHQ 32 (44)
T ss_dssp CCSEECTTTCCEESCH---HHHHHHH
T ss_pred CCCeECCCCCcccCCH---hHHHHHH
Confidence 4668999999865543 3455554
No 111
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.57 E-value=12 Score=22.80 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ytj_A 10 EKPYICAECGKAFTIR---SNLIKHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CcCeECCCCChhhCCH---HHHHHHH
Confidence 4668999999865544 3355554
No 112
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.50 E-value=12 Score=22.86 Aligned_cols=23 Identities=22% Similarity=0.460 Sum_probs=15.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eml_A 10 EKPYECSVCGKAFSHR---QSLSVHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeeCCCcCCccCCH---HHHHHHH
Confidence 4668999999865543 4466665
No 113
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.48 E-value=13 Score=22.47 Aligned_cols=16 Identities=25% Similarity=0.436 Sum_probs=12.0
Q ss_pred hccccccccccccccC
Q 022656 139 KKMALCEICGSFLVAN 154 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~ 154 (294)
.+..+|++||......
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (44)
T 2eox_A 10 SKSYNCNECGKAFTRI 25 (44)
T ss_dssp CCCEEETTTTEEESSS
T ss_pred CCCeECcccCcccCCH
Confidence 4568999999865554
No 114
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.36 E-value=15 Score=22.10 Aligned_cols=23 Identities=13% Similarity=0.265 Sum_probs=15.9
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|.
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQR---NYLVQHE 32 (44)
T ss_dssp CCSEECSSSSCEESSS---HHHHHHH
T ss_pred CCCeECCCCCchhCCH---HHHHHHh
Confidence 4568999999876654 3455564
No 115
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.36 E-value=12 Score=22.23 Aligned_cols=23 Identities=30% Similarity=0.612 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 9 ~k~~~C~~C~k~f~~~---~~L~~H~ 31 (42)
T 2en2_A 9 EKPYKCETCGARFVQV---AHLRAHV 31 (42)
T ss_dssp SCSEECTTTCCEESSH---HHHHHHT
T ss_pred CCCEeCCCcChhhCCH---HHHHHHH
Confidence 4568999999865543 3455554
No 116
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=31.35 E-value=92 Score=24.03 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 022656 85 EKIKNLLEQVETLGEAGKVDEAEALMRKVEIL 116 (294)
Q Consensus 85 ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~L 116 (294)
.+|..++.++-.|-..|+..+|..++++|-.|
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 78889999999999999999999999988765
No 117
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.29 E-value=12 Score=21.47 Aligned_cols=23 Identities=22% Similarity=0.472 Sum_probs=15.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 7 ~k~~~C~~C~k~f~~~---~~l~~H~ 29 (37)
T 2elo_A 7 GRSYSCPVCEKSFSED---RLIKSHI 29 (37)
T ss_dssp CCCCEETTTTEECSSH---HHHHHHH
T ss_pred CCCcCCCCCCCccCCH---HHHHHHH
Confidence 4568999999865543 3355554
No 118
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.24 E-value=18 Score=22.05 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2en9_A 10 KKLFKCNECKKTFTQS---SSLTVHQ 32 (46)
T ss_dssp SCCCBCTTTCCBCSSH---HHHHHHH
T ss_pred CCCEECCccCcccCCH---HHHHHHH
Confidence 4668999999865543 3455554
No 119
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.13 E-value=13 Score=22.66 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eow_A 10 EKPYKCNECGKAFRAR---SSLAIHQ 32 (46)
T ss_dssp CCCEECTTSCCEESSH---HHHHHHH
T ss_pred CCCeeccccCChhcCH---HHHHHHH
Confidence 4668999999865543 3455554
No 120
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.12 E-value=14 Score=22.56 Aligned_cols=16 Identities=19% Similarity=0.719 Sum_probs=11.9
Q ss_pred hccccccccccccccC
Q 022656 139 KKMALCEICGSFLVAN 154 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~ 154 (294)
.+...|++||......
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emh_A 10 ERPYICTVCGKAFTDR 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 4668999999765544
No 121
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.03 E-value=17 Score=22.26 Aligned_cols=23 Identities=22% Similarity=0.494 Sum_probs=15.6
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQA---SNFIQHR 32 (46)
T ss_dssp CSSCCCSSSCCCCSSH---HHHHHHH
T ss_pred CCCcCCCCCCCeeCCh---HHHHHHH
Confidence 4668999999865543 4455554
No 122
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.97 E-value=11 Score=23.09 Aligned_cols=28 Identities=29% Similarity=0.475 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDR---SNLFTHQ--KIHTG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH--TTTTT
T ss_pred CCCeECCCCCchhCCH---HHHHHHH--HHcCC
Confidence 4668999999865543 4466665 34544
No 123
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=30.76 E-value=1.1e+02 Score=25.61 Aligned_cols=22 Identities=23% Similarity=0.237 Sum_probs=10.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 022656 75 EKSEQLSVLEEKIKNLLEQVET 96 (294)
Q Consensus 75 ~~~e~i~~l~ekI~~ll~eaE~ 96 (294)
+.+++|...+.+|+.|-.++..
T Consensus 44 ~~a~~v~~~d~~iD~l~~~i~~ 65 (227)
T 1t72_A 44 ELAEEVIKGDDTIDLLEVDIER 65 (227)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHH
Confidence 3444555555555555544443
No 124
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.76 E-value=12 Score=22.80 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~~~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2emi_A 10 ERHYECSECGKAFIQK---STLSMHQ 32 (46)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH
T ss_pred CCCCCCCCCCcccCCH---HHHHHHH
Confidence 4668999999765543 4466664
No 125
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.71 E-value=16 Score=22.35 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eoh_A 10 KKPYECKECRKTFIQI---GHLNQHK 32 (46)
T ss_dssp SCSCCCSSSCCCCSSH---HHHHHHH
T ss_pred CCCcCCCCcCchhCCH---HHHHHHH
Confidence 4668999999865543 4455664
No 126
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.71 E-value=14 Score=22.56 Aligned_cols=28 Identities=25% Similarity=0.487 Sum_probs=18.5
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||..... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2emg_A 10 ENPFICSECGKVFTH---KTNLIIHQ--KIHTG 37 (46)
T ss_dssp CCSCBCTTTCCBCSS---HHHHHHHH--TTTSC
T ss_pred CCCEECCccCcccCC---HHHHHHHH--HHhCC
Confidence 466899999986553 35566775 35544
No 127
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=30.57 E-value=1.3e+02 Score=25.32 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHH--HHHHHHHHHHHHHHHHHHHhh
Q 022656 80 LSVLEEKIKNLLEQVETLGEAGKVDEA--EALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG~VdeA--~~l~~~ve~Lk~er~~l~~~~ 127 (294)
+..|..+|..+-.++..|....++|+| .++..++..|+.+.......+
T Consensus 87 ~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k~ 136 (175)
T 3lay_A 87 TSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVKR 136 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777888888889888877755 566666666666655544433
No 128
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.55 E-value=12 Score=22.85 Aligned_cols=23 Identities=26% Similarity=0.626 Sum_probs=15.2
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLS---AHLNQHL 32 (46)
T ss_dssp CCSEEETTTTEEESSH---HHHHHHH
T ss_pred CCCeECcccChhhCCH---HHHHHHH
Confidence 4668999999865543 3455554
No 129
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=30.50 E-value=13 Score=25.51 Aligned_cols=9 Identities=33% Similarity=0.951 Sum_probs=7.6
Q ss_pred ccccccccc
Q 022656 142 ALCEICGSF 150 (294)
Q Consensus 142 ~VCeVCGA~ 150 (294)
-||.||||-
T Consensus 37 w~CP~Cg~~ 45 (52)
T 1e8j_A 37 WACPVCGAS 45 (52)
T ss_dssp CCCSSSCCC
T ss_pred CcCCCCCCc
Confidence 389999984
No 130
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=30.46 E-value=1.6e+02 Score=22.98 Aligned_cols=19 Identities=11% Similarity=0.121 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 022656 43 EKLVMDLDRRVRRGRERLS 61 (294)
Q Consensus 43 ~~lI~d~dRkI~~~k~RL~ 61 (294)
..-+..+++||......++
T Consensus 87 ~eA~~~l~~r~~~l~~~~~ 105 (133)
T 1fxk_C 87 EDAMESIKSQKNELESTLQ 105 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455556666666666663
No 131
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.43 E-value=11 Score=21.56 Aligned_cols=23 Identities=17% Similarity=0.366 Sum_probs=16.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|.
T Consensus 7 ~k~~~C~~C~k~f~~~---~~l~~H~ 29 (36)
T 2elq_A 7 GKPFKCSLCEYATRSK---SNLKAHM 29 (36)
T ss_dssp CCSEECSSSSCEESCH---HHHHHHH
T ss_pred CCCccCCCCCchhCCH---HHHHHHH
Confidence 4678999999875543 4466665
No 132
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.33 E-value=18 Score=21.97 Aligned_cols=23 Identities=30% Similarity=0.613 Sum_probs=15.2
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eoq_A 10 EKPFKCDICGKSFCGR---SRLNRHS 32 (46)
T ss_dssp SCSCCCSSSCCCCSSH---HHHHHHH
T ss_pred CCCcCCCcCCchhCCH---HHHHHHH
Confidence 4668999999765543 4455554
No 133
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=30.30 E-value=13 Score=25.80 Aligned_cols=8 Identities=38% Similarity=0.870 Sum_probs=7.2
Q ss_pred cccccccc
Q 022656 143 LCEICGSF 150 (294)
Q Consensus 143 VCeVCGA~ 150 (294)
+|+||||-
T Consensus 38 ~CP~Cga~ 45 (55)
T 2v3b_B 38 VCPDCGVG 45 (55)
T ss_dssp CCTTTCCC
T ss_pred cCCCCCCC
Confidence 89999984
No 134
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.26 E-value=15 Score=22.30 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=18.6
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQ---TSKLARHQ--RVHTG 37 (46)
T ss_dssp SCSSSCCSSCCCCSS---HHHHHHHG--GGGCC
T ss_pred CCCeECCCCCcccCC---HHHHHHHH--HHcCC
Confidence 466899999976553 34566675 45554
No 135
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=30.19 E-value=13 Score=29.35 Aligned_cols=10 Identities=30% Similarity=0.849 Sum_probs=8.5
Q ss_pred cccccccccc
Q 022656 141 MALCEICGSF 150 (294)
Q Consensus 141 m~VCeVCGA~ 150 (294)
-.||++|||-
T Consensus 71 ~Y~CpiCGAT 80 (106)
T 3alr_A 71 QYKCPLCGAT 80 (106)
T ss_dssp GCCCTTTCCC
T ss_pred cccCCCCCCc
Confidence 3899999994
No 136
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.02 E-value=14 Score=22.56 Aligned_cols=28 Identities=29% Similarity=0.455 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||..... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2eq1_A 10 EKPYKCNECGKAFRA---HSNLTTHQ--VIHTG 37 (46)
T ss_dssp SCCCCCTTTTCCCSS---HHHHHHHH--TTTCC
T ss_pred CCCeECCcCChhhCC---HHHHHHHH--HHhCC
Confidence 467899999976543 34566665 34544
No 137
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.90 E-value=14 Score=22.55 Aligned_cols=23 Identities=17% Similarity=0.414 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~~~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2em3_A 10 EKPYECKVCSKAFTQK---AHLAQHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CcCeECCCCCcccCCH---HHHHHHH
Confidence 4668999999765543 3455554
No 138
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.57 E-value=15 Score=22.42 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2em8_A 10 EKPYKCVECGKGYKRR---LDLDFHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeECcccCchhCCH---HHHHHHH
Confidence 5678999999865543 3455554
No 139
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=29.56 E-value=17 Score=21.80 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=10.4
Q ss_pred hcccccccccccc
Q 022656 139 KKMALCEICGSFL 151 (294)
Q Consensus 139 qkm~VCeVCGA~L 151 (294)
..+..|++||+.+
T Consensus 18 ~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 18 PGTGHCEMCSLPR 30 (31)
T ss_dssp SSCSSCSSSCCCC
T ss_pred CCCCccCCcCCCC
Confidence 4578999999865
No 140
>3r8s_X 50S ribosomal protein L28; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 2i2v_X 2wwq_0* 3fik_X 3j01_X 3j0t_Z* 3j0w_Z* 3j0y_Z* 3j11_Z* 3j12_Z* 3j14_Z* 3j19_X 3oas_X 3oat_X* 2i2t_X* 3ofd_X 3ofc_X 3ofr_X* 3ofz_X* 3og0_X 3ofq_X ...
Probab=29.55 E-value=13 Score=27.55 Aligned_cols=13 Identities=23% Similarity=0.580 Sum_probs=9.8
Q ss_pred ccccccccccccC
Q 022656 142 ALCEICGSFLVAN 154 (294)
Q Consensus 142 ~VCeVCGA~Ls~~ 154 (294)
.||+|||.-...+
T Consensus 2 r~C~itGK~~~~G 14 (77)
T 3r8s_X 2 RVCQVTGKRPVTG 14 (77)
T ss_dssp CCCTTTCCCCEEE
T ss_pred CEeeeCCCccccC
Confidence 5899999865544
No 141
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.46 E-value=10 Score=21.80 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=15.6
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|.
T Consensus 7 ~k~~~C~~C~k~f~~~---~~l~~H~ 29 (36)
T 2elv_A 7 GLLYDCHICERKFKNE---LDRDRHM 29 (36)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeECCCCCCccCCH---HHHHHHH
Confidence 4568999999865533 4466665
No 142
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.38 E-value=15 Score=22.33 Aligned_cols=23 Identities=22% Similarity=0.426 Sum_probs=15.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2emp_A 10 VKPYMCNECGKAFSVY---SSLTTHQ 32 (46)
T ss_dssp CCSEECSSSCCEESCH---HHHHHHH
T ss_pred CcCeECCCCCchhCCH---HHHHHHH
Confidence 4668999999765543 3344453
No 143
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.32 E-value=13 Score=22.74 Aligned_cols=28 Identities=25% Similarity=0.504 Sum_probs=18.9
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVS---SHLVQHH--SVHSG 37 (46)
T ss_dssp CCSCBCSSSCCBCSSH---HHHHHHT--TTTTS
T ss_pred CcccCCCCCCcccCcH---HHHHHHH--HhcCC
Confidence 4668999999865543 4567775 35554
No 144
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=29.21 E-value=2.8e+02 Score=23.96 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQ 126 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~ 126 (294)
++...++..|+.|.++.|++..+-+--|..-+..=+.-|+++|..+.+.
T Consensus 146 ~e~~~l~~~~~~l~~qlE~~v~~K~~~E~~L~~KF~~lLNeKK~KIR~l 194 (213)
T 1ik9_A 146 KENERLLRDWNDVQGRFEKAVSAKEALETDLYKRFILVLNEKKTKIRSL 194 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4455677777777777777777766667776666677777777776543
No 145
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=29.20 E-value=1.7e+02 Score=23.93 Aligned_cols=49 Identities=10% Similarity=0.222 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
..|......|..+...++.|...|..+ +..+...++.|......|....
T Consensus 154 ~~l~~~~~~i~~l~~~a~~L~~~~h~~-~~~I~~~~~~l~~rw~~l~~~~ 202 (214)
T 1s35_A 154 GSMENNRDKVLSPVDSGNKLVAEGNLY-SDKIKEKVQLIEDRHRKNNEKA 202 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTT-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 346677888999999999999998875 5567778888887777776544
No 146
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.16 E-value=13 Score=21.26 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=15.9
Q ss_pred hhccccccccccccccCCchHHHHhhh
Q 022656 138 EKKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 138 ~qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
..+..+|++||..... ..-|..|.
T Consensus 6 ~~k~~~C~~C~k~f~~---~~~l~~H~ 29 (36)
T 2els_A 6 SGKIFTCEYCNKVFKF---KHSLQAHL 29 (36)
T ss_dssp CCCCEECTTTCCEESS---HHHHHHHH
T ss_pred CCCCEECCCCCceeCC---HHHHHHHH
Confidence 3467899999986543 34455664
No 147
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.13 E-value=12 Score=22.57 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=18.6
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (44)
T 2emb_A 10 RKRYECSKCQATFNLR---KHLIQHQ--KTHAA 37 (44)
T ss_dssp CSSEECTTTCCEESCH---HHHHHHG--GGGCC
T ss_pred CCCeECCCCCCccCCH---HHHHHHH--HHcCC
Confidence 4568999999765543 4566776 35554
No 148
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.11 E-value=16 Score=22.22 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=18.3
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~---~~~L~~H~--~~H~~ 37 (46)
T 2enf_A 10 EKPYKCNECGKVFTQ---NSHLVRHR--GIHTG 37 (46)
T ss_dssp CCSCBCSSSCCBCSS---HHHHHHHH--TTTTT
T ss_pred CcCeECCCCCcccCC---HHHHHHHH--HhhCC
Confidence 466899999976544 34566665 34544
No 149
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.94 E-value=16 Score=22.25 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=14.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (46)
T 2emy_A 10 ENPYECHECGKAFSRK---YQLISHQ 32 (46)
T ss_dssp SCCEECSSSCCEESSH---HHHHHHH
T ss_pred CcCcCCCCCCcccCcH---HHHHHHH
Confidence 4668999999765543 3344453
No 150
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=28.90 E-value=14 Score=27.81 Aligned_cols=8 Identities=38% Similarity=0.916 Sum_probs=6.8
Q ss_pred cccccccc
Q 022656 143 LCEICGSF 150 (294)
Q Consensus 143 VCeVCGA~ 150 (294)
||+||||-
T Consensus 62 ~CPvCga~ 69 (81)
T 2kn9_A 62 SCPDCGAA 69 (81)
T ss_dssp CCTTTCCC
T ss_pred cCCCCCCC
Confidence 89999983
No 151
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.87 E-value=15 Score=22.38 Aligned_cols=28 Identities=29% Similarity=0.513 Sum_probs=18.4
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2yti_A 10 EKPYKCNECGKVFTQN---SHLARHR--GIHTG 37 (46)
T ss_dssp CCTTCCSSSCCCCSSH---HHHHHHH--TTTSC
T ss_pred CcCeECCCCCcccCCh---hHHHHHh--HhcCC
Confidence 4668999999765543 4566665 45544
No 152
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=28.83 E-value=13 Score=24.75 Aligned_cols=11 Identities=45% Similarity=1.120 Sum_probs=9.1
Q ss_pred ccccccccccc
Q 022656 140 KMALCEICGSF 150 (294)
Q Consensus 140 km~VCeVCGA~ 150 (294)
.|-+||.||++
T Consensus 5 ~~~~CE~CG~~ 15 (43)
T 2w0t_A 5 EPAVCEMCGIV 15 (43)
T ss_dssp CEEECTTTCCE
T ss_pred ceehhhhhcCc
Confidence 46799999985
No 153
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.72 E-value=16 Score=22.36 Aligned_cols=28 Identities=29% Similarity=0.637 Sum_probs=18.3
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQS---SHLQTHQ--RVHTG 37 (46)
T ss_dssp CCCCBCSSSCCBCSSH---HHHHHHH--TTTSS
T ss_pred CCCeECCCCCcccCCH---HHHHHHH--HHcCC
Confidence 4668999999865543 4566665 34544
No 154
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.63 E-value=13 Score=22.20 Aligned_cols=28 Identities=36% Similarity=0.617 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+. .|.|
T Consensus 9 ~k~~~C~~C~k~f~~~---~~L~~H~~--~H~~ 36 (42)
T 2eos_A 9 EKPYPCEICGTRFRHL---QTLKSHLR--IHTG 36 (42)
T ss_dssp SCCBCCSSSCCCBSSH---HHHHHHTT--TTSC
T ss_pred CCCEECCCCCCccCCH---HHHHHHHH--hcCC
Confidence 4668999999865533 45666753 4544
No 155
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.60 E-value=19 Score=21.97 Aligned_cols=28 Identities=36% Similarity=0.611 Sum_probs=17.8
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2yth_A 10 EKPFQCEECGKRFTQN---SHLHSHQ--RVHTG 37 (46)
T ss_dssp SSSBCCSSSCCCBSSH---HHHHHHG--GGGTT
T ss_pred CcCCCCCCCCcccCCH---HHHHHHH--HhcCC
Confidence 4668999999865543 4466665 34544
No 156
>3h7h_A Transcription elongation factor SPT4; helices surrounding beta sheet, activator, ME binding, nucleus, repressor, transcription regulation; 1.55A {Homo sapiens}
Probab=28.57 E-value=15 Score=29.61 Aligned_cols=24 Identities=21% Similarity=0.380 Sum_probs=17.6
Q ss_pred ccccccccccccCCchHHHHhhhc
Q 022656 142 ALCEICGSFLVANDAAERTQSHIS 165 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~Rl~dH~~ 165 (294)
..|++||.||-...+..++.+-++
T Consensus 34 ~gCpnC~~~l~m~~~~d~v~~ctT 57 (120)
T 3h7h_A 34 DGCDNCDAYLQMKGNREMVYDCTS 57 (120)
T ss_dssp HCCTTTHHHHCCTTCHHHHHHHEE
T ss_pred CCCCCCcchhhccCCccccccccc
Confidence 589999998876666667776533
No 157
>2vqe_T 30S ribosomal protein S20; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.7.6.1 PDB: 1gix_W* 1hnw_T* 1hnx_T* 1hnz_T* 1hr0_T 1j5e_T 1jgo_W* 1jgp_W* 1jgq_W* 1ml5_W* 1yl4_W 2b64_T* 2b9m_T* 2b9o_T* 2f4v_T* 2ow8_u* 2qnh_u* 2uxb_T* 1fjg_T* 2uxd_T* ...
Probab=28.48 E-value=1.1e+02 Score=23.94 Aligned_cols=37 Identities=35% Similarity=0.418 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNV 118 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~ 118 (294)
.+-..|...+.+++.+.+.|+.+.|+.++..+...-.
T Consensus 28 a~kS~~rT~iKkv~~Ai~~gdk~~A~~~l~~a~s~iD 64 (106)
T 2vqe_T 28 AKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLID 64 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4556777888899999999999999999988877643
No 158
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=28.44 E-value=15 Score=22.40 Aligned_cols=23 Identities=26% Similarity=0.515 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ema_A 10 EKRYKCNECGKVFSRN---SQLSQHQ 32 (46)
T ss_dssp SCCEECSSSCCEESSH---HHHHHHH
T ss_pred CcCcCCCCCcchhCCH---HHHHHHH
Confidence 4668999999865543 4455564
No 159
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.33 E-value=15 Score=20.86 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=14.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|.
T Consensus 7 ~k~~~C~~C~k~f~~~---~~l~~H~ 29 (36)
T 2elt_A 7 GKPYKCPQCSYASAIK---ANLNVHL 29 (36)
T ss_dssp CCSEECSSSSCEESSH---HHHHHHH
T ss_pred CCCCCCCCCCcccCCH---HHHHHHH
Confidence 4678999999754432 3455554
No 160
>3mhs_E SAGA-associated factor 73; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_E 4fip_D 4fjc_D 4fk5_E 3m99_D
Probab=28.09 E-value=13 Score=28.83 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=16.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
-..+||.-||..|++.- |-|||
T Consensus 73 ~~YRvCn~CGkPI~l~A----IvDHL 94 (96)
T 3mhs_E 73 IQYRVCEKCGKPLALTA----IVDHL 94 (96)
T ss_dssp CCCEEETTTCCEECGGG----TTTCC
T ss_pred ccchhhhccCCceeHHH----HHHHh
Confidence 45699999999988652 45555
No 161
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=28.08 E-value=15 Score=26.72 Aligned_cols=9 Identities=33% Similarity=0.726 Sum_probs=7.5
Q ss_pred ccccccccc
Q 022656 142 ALCEICGSF 150 (294)
Q Consensus 142 ~VCeVCGA~ 150 (294)
-||+||||-
T Consensus 41 w~CP~Cga~ 49 (70)
T 1dx8_A 41 FMCPACRSP 49 (70)
T ss_dssp CBCTTTCCB
T ss_pred CcCCCCCCC
Confidence 399999984
No 162
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.04 E-value=15 Score=22.35 Aligned_cols=28 Identities=25% Similarity=0.523 Sum_probs=18.4
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2eme_A 10 EKPYVCDYCGKAFGL---SAELVRHQ--RIHTG 37 (46)
T ss_dssp CCSEECSSSCCEESS---HHHHHHHH--GGGCC
T ss_pred CCCeECCCCChhhCC---HHHHHHHH--HhcCC
Confidence 466899999976543 35566675 35544
No 163
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.80 E-value=22 Score=21.69 Aligned_cols=23 Identities=26% Similarity=0.384 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDN---SSCTQHQ 32 (46)
T ss_dssp CCSSSBTTTTBCCSSH---HHHHHHH
T ss_pred CCCcCCCCCCchhCCH---HHHHHHH
Confidence 4668999999865543 4455554
No 164
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.56 E-value=13 Score=22.68 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=18.4
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVR---SSLTTHQ--AIHTG 37 (46)
T ss_dssp CCSSEETTTTEECSSH---HHHHHHH--TTSCC
T ss_pred CCCeECCCCChhhCCH---HHHHHHH--HHhCC
Confidence 4668999999865543 4566675 34544
No 165
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.41 E-value=17 Score=22.04 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH---IGLNQHR--RIHTG 37 (46)
T ss_dssp CCSBCCTTTCCCBSSH---HHHHHHH--TTTTT
T ss_pred CCCeECCCCCceeCCH---HHHHHHH--HHhCC
Confidence 4668999999865533 4566665 34544
No 166
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.36 E-value=17 Score=21.82 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=14.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 8 ~k~~~C~~C~k~f~~~---~~L~~H~ 30 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSK---SYLLVHQ 30 (44)
T ss_dssp CCCEECSSSSCEESSH---HHHHHHH
T ss_pred CcCccCCCCCcccCCH---HHHHHHH
Confidence 4568999999765544 3344443
No 167
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=27.29 E-value=4.1e+02 Score=25.28 Aligned_cols=29 Identities=10% Similarity=-0.056 Sum_probs=20.1
Q ss_pred hhHHH---HHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 32 PKFEA---ELAQFCEKLVMDLDRRVRRGRERL 60 (294)
Q Consensus 32 ~~YE~---e~l~~L~~lI~d~dRkI~~~k~RL 60 (294)
..||. .-++.|+.+|.+++.....++.-+
T Consensus 30 ~k~e~~V~~~l~~LE~~l~elsn~ts~v~~Lv 61 (409)
T 1m1j_C 30 NKYRLTTDGELLEIEGLLQQATNSTGSIEYLI 61 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666 456777888888888877666544
No 168
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.22 E-value=21 Score=21.74 Aligned_cols=28 Identities=29% Similarity=0.390 Sum_probs=18.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+. .|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~~--~H~~ 37 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRR---LNLDMHQR--VHMG 37 (46)
T ss_dssp CSSCBCSSSCCBCSSH---HHHHHHGG--GGGS
T ss_pred CCCeeCcccCchhCCH---HHHHHHHH--hcCC
Confidence 4668999999865543 44666653 4544
No 169
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.21 E-value=17 Score=22.14 Aligned_cols=28 Identities=25% Similarity=0.403 Sum_probs=18.4
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQR---VHLTQHQ--RVHTG 37 (46)
T ss_dssp CCSEECTTTCCEESSS---HHHHTTG--GGGSS
T ss_pred CCCeECCCCCcccCCH---HHHHHHH--HHcCC
Confidence 4678999999865544 4566665 34544
No 170
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=26.94 E-value=2.5e+02 Score=22.63 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHH-----HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 022656 38 LAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLE-----EKIKNLLEQVETLGEAGKVDEAEALMRK 112 (294)
Q Consensus 38 ~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~-----ekI~~ll~eaE~LGeeG~VdeA~~l~~~ 112 (294)
+..+|..|+.++...|..-..-|+..+ .. .......+-.|+-.. ..+..+..++|.++..|+++++..++.+
T Consensus 42 ~~ell~~Fl~d~~~~l~~L~~al~~~~--~D-~~~l~~~aH~LKGss~~lGa~~l~~~c~~lE~~~~~~~~~~~~~~l~~ 118 (153)
T 3us6_A 42 VFEVVSLFFDDSERILKDLSFAVDQQS--ID-FKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQ 118 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSS--CC-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--cc-HHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456678899999999988777774321 00 001111222333333 4455788999999999999988766554
Q ss_pred HHH
Q 022656 113 VEI 115 (294)
Q Consensus 113 ve~ 115 (294)
++.
T Consensus 119 l~~ 121 (153)
T 3us6_A 119 VKQ 121 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 171
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.93 E-value=17 Score=22.13 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|.
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2yso_A 10 EKSHQCRECGEIFFQY---VSLIEHQ 32 (46)
T ss_dssp CCCEECTTTCCEESSH---HHHHHHH
T ss_pred CCCEEccccChhhCCH---HHHHHHH
Confidence 4568999999865543 3455554
No 172
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=26.88 E-value=16 Score=22.32 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=17.9
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGK---LRLLVHQ--RMHTR 37 (46)
T ss_dssp CCSEECSSSSCEESSH---HHHHHHH--GGGCC
T ss_pred CCCeECCCCCcccCCH---HHHHHHH--HHcCC
Confidence 4668999999865543 4466664 34544
No 173
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=26.87 E-value=93 Score=29.64 Aligned_cols=24 Identities=29% Similarity=0.369 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 104 DEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 104 deA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
+++..+++++..|+.+...|++++
T Consensus 64 ~~~~~l~~~~~~~~~~~~~~~~~~ 87 (421)
T 1ses_A 64 EEKEALIARGKALGEEAKRLEEAL 87 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777777666543
No 174
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.82 E-value=15 Score=19.60 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=13.3
Q ss_pred cccccccccccccCCchHHHHhhh
Q 022656 141 MALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
...|++||.-.... .-|..|.
T Consensus 3 ~~~C~~C~k~f~~~---~~l~~H~ 23 (27)
T 2kvg_A 3 PYRCPLCRAGCPSL---ASMQAHM 23 (27)
T ss_dssp TEEETTTTEEESCH---HHHHHHH
T ss_pred CcCCCCCCcccCCH---HHHHHHH
Confidence 46899999764432 3455554
No 175
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.81 E-value=18 Score=21.93 Aligned_cols=28 Identities=25% Similarity=0.510 Sum_probs=18.3
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQ---TSKLARHQ--RIHTG 37 (46)
T ss_dssp CCTTCCTTTCCCCSS---HHHHHHHH--TTTTT
T ss_pred CcCcCCCCCCCccCC---HHHHHHHH--HhcCC
Confidence 466899999986553 34566675 34544
No 176
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.72 E-value=19 Score=21.85 Aligned_cols=28 Identities=32% Similarity=0.536 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQN---SHLARHR--GIHTG 37 (46)
T ss_dssp CSSCBCTTTCCBCSSH---HHHHHHG--GGTSC
T ss_pred CcCeECCCCCCeeCCH---HHHHHHh--hhcCC
Confidence 4668999999765543 4566675 34544
No 177
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=26.69 E-value=3.4e+02 Score=24.06 Aligned_cols=86 Identities=13% Similarity=0.075 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh--cCCCCCCCC-C------chhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 022656 39 AQFCEKLVMDLDRRVRRGRERLSQ--EVEPAPPPP-I------SAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEAL 109 (294)
Q Consensus 39 l~~L~~lI~d~dRkI~~~k~RL~~--~~e~~~~~~-~------~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l 109 (294)
+..|..|+.+|+.-+.=..++... ..+-..... . -.....+|...+..|+.++..++.|..+|-. .|..+
T Consensus 7 l~~L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp-~~~~I 85 (283)
T 3pe0_A 7 LESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHP-ARPTV 85 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCT-THHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-ChHHH
Confidence 345667777777766554444432 111111111 1 1123456778888999999999999999975 35567
Q ss_pred HHHHHHHHHHHHHHHH
Q 022656 110 MRKVEILNVEKTTLTQ 125 (294)
Q Consensus 110 ~~~ve~Lk~er~~l~~ 125 (294)
.+.++.|+.....|.+
T Consensus 86 ~~r~~~L~~~W~~L~~ 101 (283)
T 3pe0_A 86 ESFQAALQTQWSWMLQ 101 (283)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777666553
No 178
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.61 E-value=20 Score=21.87 Aligned_cols=23 Identities=26% Similarity=0.437 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ytt_A 10 EKPYQCSECGKSFSGS---YRLTQHW 32 (46)
T ss_dssp CCTTCCSSSCCCCSSH---HHHHHHH
T ss_pred CCCeeCCCCCcccCCH---HHHHHHH
Confidence 4668999999865543 4455554
No 179
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.58 E-value=18 Score=21.96 Aligned_cols=28 Identities=29% Similarity=0.577 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN---SHLANHQ--RIHTG 37 (46)
T ss_dssp CCSSEETTTTEECSSH---HHHHHHH--GGGSC
T ss_pred CCCeECCCcChhhCCH---HHHHHHH--HHcCC
Confidence 4668999999765433 4566665 34544
No 180
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.40 E-value=23 Score=21.34 Aligned_cols=28 Identities=25% Similarity=0.535 Sum_probs=18.3
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2en8_A 10 EKSHTCDECGKNFCY---ISALRIHQ--RVHMG 37 (46)
T ss_dssp CSSEECTTTCCEESS---HHHHHHHH--TTTCC
T ss_pred CCCeECCCcCcccCC---HHHHHHHH--HHhCC
Confidence 456899999976543 34566675 45554
No 181
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.30 E-value=16 Score=22.24 Aligned_cols=23 Identities=35% Similarity=0.495 Sum_probs=15.6
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2enc_A 10 EKPFKCEECGKGFYTN---SQCYSHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCcCCCCCCCcCCCh---HHHHHHH
Confidence 4668999999865543 3455564
No 182
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=26.24 E-value=16 Score=22.53 Aligned_cols=15 Identities=20% Similarity=0.519 Sum_probs=11.6
Q ss_pred cccccccccccccCC
Q 022656 141 MALCEICGSFLVAND 155 (294)
Q Consensus 141 m~VCeVCGA~Ls~~D 155 (294)
..||++|.|.-..+|
T Consensus 16 ~~~CP~CtA~d~t~~ 30 (32)
T 2bai_A 16 FEECPKCSALQYRNG 30 (32)
T ss_dssp GGGHHHHHCSSSTTC
T ss_pred cccccccceeeccCC
Confidence 479999999866553
No 183
>3frt_A Charged multivesicular BODY protein 3; ESCRT, ESCRT-111, CHMP, IST1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein; 4.00A {Homo sapiens}
Probab=26.17 E-value=3.2e+02 Score=23.69 Aligned_cols=65 Identities=14% Similarity=0.210 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Q 022656 44 KLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTL 123 (294)
Q Consensus 44 ~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l 123 (294)
..+.+|.+.|+++...|. .+|..|+..=+.+..+|-.+...|+++.|--+...+=..+.+...|
T Consensus 10 e~~r~~~r~Lr~~~R~Ld----------------R~~~kle~eEkk~~~~IKkaakkg~~~~arilAkelVR~Rk~~~rl 73 (218)
T 3frt_A 10 ELVNEWSLKIRKEMRVVD----------------RQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKL 73 (218)
T ss_dssp HHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666553 3444455555556677888888999999888777777776666554
Q ss_pred H
Q 022656 124 T 124 (294)
Q Consensus 124 ~ 124 (294)
.
T Consensus 74 ~ 74 (218)
T 3frt_A 74 Y 74 (218)
T ss_dssp H
T ss_pred H
Confidence 4
No 184
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=26.11 E-value=20 Score=24.77 Aligned_cols=15 Identities=27% Similarity=0.620 Sum_probs=11.9
Q ss_pred hhccccccccccccc
Q 022656 138 EKKMALCEICGSFLV 152 (294)
Q Consensus 138 ~qkm~VCeVCGA~Ls 152 (294)
...|..|+.||+.+.
T Consensus 15 ~~~~~fCPkCG~~~~ 29 (55)
T 2k4x_A 15 VRKHRFCPRCGPGVF 29 (55)
T ss_dssp CCSSCCCTTTTTTCC
T ss_pred EEccccCcCCCCcee
Confidence 356899999999664
No 185
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=26.10 E-value=1.4e+02 Score=29.20 Aligned_cols=17 Identities=0% Similarity=0.096 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHHHHHHH
Q 022656 76 KSEQLSVLEEKIKNLLE 92 (294)
Q Consensus 76 ~~e~i~~l~ekI~~ll~ 92 (294)
+..+...++.+|+.+++
T Consensus 56 l~~~rN~~sk~i~~~~~ 72 (484)
T 3lss_A 56 SKKLINICSKAVGAKKK 72 (484)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 34555666677766554
No 186
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.09 E-value=15 Score=22.43 Aligned_cols=28 Identities=29% Similarity=0.432 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-... ..-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~---~~~L~~H~--~~H~~ 37 (46)
T 2emf_A 10 GKHFECTECGKAFTR---KSTLSMHQ--KIHTG 37 (46)
T ss_dssp SCCEECSSSCCEESC---HHHHHHHG--GGTSC
T ss_pred CCCeECCCCCchhCC---HHHHHHHH--HHhCC
Confidence 466899999976543 34566665 34544
No 187
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=26.05 E-value=21 Score=34.24 Aligned_cols=20 Identities=15% Similarity=0.307 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 022656 107 EALMRKVEILNVEKTTLTQQ 126 (294)
Q Consensus 107 ~~l~~~ve~Lk~er~~l~~~ 126 (294)
..+-.++..|.++..+++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ 97 (425)
T 2dq3_A 78 KELKEEIDRLEEELRKVEEE 97 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444334333
No 188
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.01 E-value=18 Score=21.92 Aligned_cols=23 Identities=17% Similarity=0.453 Sum_probs=15.4
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2emm_A 10 ERPHKCNECGKSFIQS---AHLIQHQ 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeeCCCCChhhCCH---HHHHHHH
Confidence 4668999999765543 3455554
No 189
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.89 E-value=20 Score=21.70 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eop_A 10 EKPHECRECGKSFSFN---SQLIVHQ 32 (46)
T ss_dssp CCSCBCTTTCCBCSSH---HHHHHHH
T ss_pred CCCeeCCCCCchhCCH---HHHHHHH
Confidence 4668999999765543 4466665
No 190
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.88 E-value=14 Score=22.44 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||...... .-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQK---ANLTQHQ--RIHTG 37 (46)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH--TTTSS
T ss_pred CCCeECCCCCCccCCH---HHHHHHH--HHcCC
Confidence 4668999999765543 4566665 34544
No 191
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=25.87 E-value=21 Score=21.68 Aligned_cols=28 Identities=21% Similarity=0.411 Sum_probs=18.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2em0_A 10 EKTWKCRECDMCFSQA---SSLRLHQ--NVHVG 37 (46)
T ss_dssp CCCCCCSSSCCCCSSH---HHHHHHG--GGGSS
T ss_pred CcCeECCCCCcccCCH---HHHHHHH--HHcCC
Confidence 4668999999765543 4566665 34544
No 192
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=25.84 E-value=13 Score=27.10 Aligned_cols=17 Identities=29% Similarity=0.710 Sum_probs=12.1
Q ss_pred ccccccccccccCCchHH
Q 022656 142 ALCEICGSFLVANDAAER 159 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~R 159 (294)
-+|+ ||+++++.+....
T Consensus 5 v~C~-C~~~~~~~~~~kT 21 (71)
T 1gh9_A 5 FRCD-CGRALYSREGAKT 21 (71)
T ss_dssp EEET-TSCCEEEETTCSE
T ss_pred EECC-CCCEEEEcCCCcE
Confidence 4788 9988887765443
No 193
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=25.79 E-value=1.4e+02 Score=24.19 Aligned_cols=20 Identities=0% Similarity=0.258 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 022656 40 QFCEKLVMDLDRRVRRGRER 59 (294)
Q Consensus 40 ~~L~~lI~d~dRkI~~~k~R 59 (294)
.+|..+...||.+|..-...
T Consensus 28 e~L~~vA~~vd~km~ei~~~ 47 (138)
T 3hnw_A 28 EYLQRVASYINNKITEFNKE 47 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 45666777777888766533
No 194
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.77 E-value=22 Score=21.52 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=15.5
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRA---PCLLKHE 32 (46)
T ss_dssp CCCCCBTTTTBCCSCH---HHHHHHH
T ss_pred CCCeECCCCCCccCch---HHHHHHH
Confidence 4568999999865543 4455564
No 195
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=25.74 E-value=2e+02 Score=21.22 Aligned_cols=63 Identities=25% Similarity=0.253 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 022656 47 MDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQ 126 (294)
Q Consensus 47 ~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~ 126 (294)
...+..|...+..|+.. .....+|+.+...|+++...|-.+ ..+|. ..++.|...+..|+..
T Consensus 17 ~~~eeel~~lke~l~k~-------------e~~rkele~~~~~l~~ek~~L~~q--l~eaE---e~~~~L~~~K~eLE~~ 78 (89)
T 3bas_A 17 KEQLKQMDKMKEDLAKT-------------ERIKKELEEQNVTLLEQKNDLFGS--MKQLE---DKVEELLSKNYHLENE 78 (89)
T ss_dssp HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHH--HHHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHH--HHhHH---HHHHHHHHHHHHHHHH
Confidence 34566666666666432 234456666666666666666665 33443 4455566666666655
Q ss_pred h
Q 022656 127 S 127 (294)
Q Consensus 127 ~ 127 (294)
+
T Consensus 79 l 79 (89)
T 3bas_A 79 V 79 (89)
T ss_dssp H
T ss_pred H
Confidence 4
No 196
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=25.69 E-value=2.8e+02 Score=22.84 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Q 022656 85 EKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLT 124 (294)
Q Consensus 85 ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~ 124 (294)
..|..+....+.|...|..+ +..+-..+..|......|.
T Consensus 67 ~~~~~~~~~G~~Ll~~~~~~-~~~i~~~l~~L~~~w~~L~ 105 (218)
T 3fb2_A 67 GTFQAFEQFGQQLLAHGHYA-SPEIKQKLDILDQERADLE 105 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCTT-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHHHHHH
Confidence 45555666666666666532 2345556666666655554
No 197
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=25.61 E-value=3.1e+02 Score=23.38 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Q 022656 84 EEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLT 124 (294)
Q Consensus 84 ~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~ 124 (294)
...|..+++++..+-..|+.+.|..++.++-=+..-.+.|.
T Consensus 161 ~~~~~~~~~~l~~~~~~~d~~~A~~~v~kL~y~~kl~~~i~ 201 (207)
T 3bvo_A 161 KAKQKEFTDNVSSAFEQDDFEEAKEILTKMRYFSNIEEKIK 201 (207)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555566678888887777666655543333333
No 198
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=25.60 E-value=17 Score=22.09 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=17.8
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2em9_A 10 EKPYNCKECGKSFRWA---SCLLKHQ--RVHSG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHG--GGGTS
T ss_pred CcCeECCccccccCCh---HHHHHHH--HHhCC
Confidence 4678999999765433 4466664 34543
No 199
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=25.58 E-value=18 Score=20.27 Aligned_cols=12 Identities=17% Similarity=0.456 Sum_probs=8.7
Q ss_pred cccccccccccc
Q 022656 141 MALCEICGSFLV 152 (294)
Q Consensus 141 m~VCeVCGA~Ls 152 (294)
...|++||.-.+
T Consensus 2 p~~C~~C~k~f~ 13 (32)
T 2kfq_A 2 AFACPACPKRFM 13 (32)
T ss_dssp CSSSSSSCTTHH
T ss_pred CCCCCCCCcccC
Confidence 367999997543
No 200
>2lj9_A CP12 domain-containing protein 2; helix, protein binding, intrinsically disordered protein; NMR {Arabidopsis thaliana}
Probab=25.54 E-value=15 Score=28.70 Aligned_cols=44 Identities=11% Similarity=0.120 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHH
Q 022656 80 LSVLEEKIKNLLEQVETLGEAG-KVDEAEALMRKVEILNVEKTTL 123 (294)
Q Consensus 80 i~~l~ekI~~ll~eaE~LGeeG-~VdeA~~l~~~ve~Lk~er~~l 123 (294)
...|+++|.+.+++|..+-..| .-.++......||+|+++..-.
T Consensus 25 ~~~L~e~Ie~ai~eAr~~Ca~g~~S~eCa~AWd~VEELqAeashq 69 (99)
T 2lj9_A 25 EGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 69 (99)
T ss_dssp ---------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 4468999999999999998775 3346667788888888775443
No 201
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.44 E-value=16 Score=22.20 Aligned_cols=28 Identities=25% Similarity=0.593 Sum_probs=18.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2yts_A 10 EKPYICNECGKSFIQK---SHLNRHR--RIHTG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHG--GGTSS
T ss_pred CcCEECCCCChhhCCh---HHHHHHH--HhcCC
Confidence 4668999999765543 4466665 34544
No 202
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.41 E-value=15 Score=22.51 Aligned_cols=28 Identities=21% Similarity=0.443 Sum_probs=18.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2ytp_A 10 ERHYECSECGKAFARK---STLIMHQ--RIHTG 37 (46)
T ss_dssp CCCEECSSSCCEESSH---HHHHHHH--TTTSC
T ss_pred CCCeECCcCCcccCCH---HHHHHHH--HHhCC
Confidence 4668999999765543 4466665 24544
No 203
>3kdq_A Uncharacterized conserved protein; functionally unknown protein,corynebacterium diphtheriae, structural genomics, PSI-2; 3.00A {Corynebacterium diphtheriae}
Probab=25.12 E-value=1.9e+02 Score=23.84 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhhhhc---CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHHH
Q 022656 47 MDLDRRVRRGRERLSQE---VEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDE---AEALMRKVEILNVEK 120 (294)
Q Consensus 47 ~d~dRkI~~~k~RL~~~---~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~Vde---A~~l~~~ve~Lk~er 120 (294)
.++.++|..-+.||... +++..|+..+.+...++..+..++..|+.+|..--..-.+++ -..++++.+.|+.+.
T Consensus 14 adl~kri~qL~~ri~~n~~vQEGe~P~edp~~Ll~El~~~~~~L~~Li~~IN~TN~~~~~~~~~tl~eaia~rd~L~~~~ 93 (154)
T 3kdq_A 14 VEAQRRYSELNQLLLDVAKVQEGDQPAENPHEILTELEELTTRINDLVRRINRTNSVTEFSEGMTLADALSVRDALLKKR 93 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTEEETTCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCeecCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCcHHHHHHHHHHHHHHH
Confidence 34455555555555421 333333444667778888888888888888887442222211 134566777888777
Q ss_pred HHHHHhh
Q 022656 121 TTLTQQS 127 (294)
Q Consensus 121 ~~l~~~~ 127 (294)
..+..-.
T Consensus 94 ~~l~~~~ 100 (154)
T 3kdq_A 94 TLYSDLA 100 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
No 204
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=24.87 E-value=1.3e+02 Score=32.44 Aligned_cols=20 Identities=20% Similarity=0.162 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 022656 108 ALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 108 ~l~~~ve~Lk~er~~l~~~~ 127 (294)
.+..++..|.++.+.|.+++
T Consensus 981 ~~~~~v~~L~~e~~~l~~~~ 1000 (1080)
T 2dfs_A 981 NATNRVLSLQEEIAKLRKEL 1000 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33445555555555555444
No 205
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.84 E-value=20 Score=21.83 Aligned_cols=28 Identities=25% Similarity=0.460 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSK---SYLIIHM--RTHSG 37 (46)
T ss_dssp CCSCBCSSSCCBCSCH---HHHHHHH--TTTCC
T ss_pred CCCcCCCccChhhCCh---HHHHHHH--HHhCC
Confidence 4668999999765543 4566665 24544
No 206
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.83 E-value=18 Score=22.04 Aligned_cols=28 Identities=29% Similarity=0.558 Sum_probs=17.9
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ep2_A 10 EKPYECSICGKSFTKK---SQLHVHQ--QIHTG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH--HTTSS
T ss_pred CcCcCCCCCCcccCCH---HHHHHHH--HHhCC
Confidence 4668999999865543 4466665 24544
No 207
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.83 E-value=16 Score=22.11 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=17.9
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ytf_A 10 EKPFECSECQKAFNTK---SNLIVHQ--RTHTG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH--HTSCS
T ss_pred CCCcCCCCCCcccCCH---HHHHHHH--HHhCC
Confidence 4668999999865543 4466665 34544
No 208
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=24.72 E-value=18 Score=27.49 Aligned_cols=7 Identities=43% Similarity=1.184 Sum_probs=5.4
Q ss_pred ccccccc
Q 022656 143 LCEICGS 149 (294)
Q Consensus 143 VCeVCGA 149 (294)
||.||||
T Consensus 70 ~CPvCga 76 (87)
T 1s24_A 70 CCPDCGA 76 (87)
T ss_dssp CCSSSCC
T ss_pred CCCCCCC
Confidence 7888876
No 209
>2cly_B ATP synthase D chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.53.1.1 PDB: 2wss_U*
Probab=24.60 E-value=75 Score=26.46 Aligned_cols=56 Identities=7% Similarity=0.093 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhccccccccccccccC
Q 022656 82 VLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQSQNDKVLMMAQEKKMALCEICGSFLVAN 154 (294)
Q Consensus 82 ~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~~~~~~~~~~~~qkm~VCeVCGA~Ls~~ 154 (294)
.++.+-+++++++++. .......+..|+++.+.++... +--+|-|-|+|-||.-+.
T Consensus 88 ~i~a~e~~~~~~a~~~--------~~~s~~ri~~lekeL~~i~~~~---------P~~~mT~dd~~~a~Pe~~ 143 (160)
T 2cly_B 88 QVDAEEKEDVKSCAEF--------LTQSKTRIQEYEKELEKMRNII---------PFDQMTIEDLNEVFPETK 143 (160)
T ss_dssp HHHHHHHHHHHTHHHH--------HHHHHHHHHHHHHHHHHHTC-----------------------------
T ss_pred HHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHcCC---------ChHhCCHHHHHHhCchhc
Confidence 4455555555555554 2233334445555544443221 345789999999986543
No 210
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=24.39 E-value=16 Score=21.67 Aligned_cols=9 Identities=56% Similarity=1.147 Sum_probs=7.4
Q ss_pred ccccccccc
Q 022656 143 LCEICGSFL 151 (294)
Q Consensus 143 VCeVCGA~L 151 (294)
-|++|.+|-
T Consensus 5 YCe~CE~FG 13 (26)
T 2hqh_E 5 YCEICEMFG 13 (26)
T ss_dssp EETTTTEES
T ss_pred cchHHHHhC
Confidence 599999884
No 211
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.24 E-value=28 Score=23.72 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=6.0
Q ss_pred ccccccccccc
Q 022656 140 KMALCEICGSF 150 (294)
Q Consensus 140 km~VCeVCGA~ 150 (294)
+..+|++||.-
T Consensus 45 ~~~~C~~C~~~ 55 (77)
T 2cot_A 45 KPYKCDECGKA 55 (77)
T ss_dssp CSEECSSSCCE
T ss_pred cCeeCCCCCCc
Confidence 34556666643
No 212
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.19 E-value=20 Score=21.80 Aligned_cols=23 Identities=30% Similarity=0.501 Sum_probs=15.0
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2em2_A 10 EKPFKCKECGKAFRQN---IHLASHL 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCEECCcCCchhCCH---HHHHHHH
Confidence 4668999999865543 3355554
No 213
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=24.17 E-value=2.5e+02 Score=34.07 Aligned_cols=110 Identities=10% Similarity=0.078 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Q 022656 42 CEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKT 121 (294)
Q Consensus 42 L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~ 121 (294)
+..-+...+.....+++.|++-+ ....++.++|..|.++..+++.+.+.|-.+ ++.++.-+..++.|-.-..
T Consensus 2012 kr~~l~~ae~~l~~~~~~L~~~~------~~L~~le~~l~~L~~~~~~~~~ek~~L~~e--~~~~~~kl~rA~~Li~gL~ 2083 (3245)
T 3vkg_A 2012 LREEVEQLENAANELKLKQDEIV------ATITALEKSIATYKEEYATLIRETEQIKTE--SSKVKNKVDRSIALLDNLN 2083 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhh
Q ss_pred HHHHhhhhhhhhhhhhhhcc----ccccccccccccCCchHH
Q 022656 122 TLTQQSQNDKVLMMAQEKKM----ALCEICGSFLVANDAAER 159 (294)
Q Consensus 122 ~l~~~~~~~~~~~~~~~qkm----~VCeVCGA~Ls~~D~d~R 159 (294)
.=.............+...+ -+|--|=||+...+.+-|
T Consensus 2084 ~Ek~RW~~~~~~l~~~~~~L~GD~LLaaafisY~G~f~~~~R 2125 (3245)
T 3vkg_A 2084 SERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFR 2125 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred hccccHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCHHHH
No 214
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=24.14 E-value=3.4e+02 Score=25.32 Aligned_cols=20 Identities=10% Similarity=0.159 Sum_probs=10.0
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 022656 75 EKSEQLSVLEEKIKNLLEQV 94 (294)
Q Consensus 75 ~~~e~i~~l~ekI~~ll~ea 94 (294)
.++++|.++.+....+-+++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~ 420 (471)
T 3mq9_A 401 LLQQELTEAQKGFQDVEAQA 420 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHh
Confidence 34555555555554444443
No 215
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=23.85 E-value=17 Score=22.08 Aligned_cols=28 Identities=21% Similarity=0.350 Sum_probs=18.2
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||...... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK---SQLIVHQ--RSHTG 37 (46)
T ss_dssp CCSEECSSSSCEESSH---HHHHHHG--GGSSS
T ss_pred CCceECCCCCchhCCH---HHHHHHH--HHhCC
Confidence 4568999999765543 4566665 34544
No 216
>3abq_A Ethanolamine ammonia-lyase heavy chain; (beta/alpha)8 fold, cobalt, cobalamin; HET: B12; 2.05A {Escherichia coli} PDB: 3abo_A* 3abr_A* 3abs_A* 3any_A* 3ao0_A*
Probab=23.80 E-value=17 Score=35.22 Aligned_cols=28 Identities=21% Similarity=0.436 Sum_probs=18.5
Q ss_pred cccccccccccc---cCCchH--H--HHhhhccccc
Q 022656 141 MALCEICGSFLV---ANDAAE--R--TQSHISGKQH 169 (294)
Q Consensus 141 m~VCeVCGA~Ls---~~D~d~--R--l~dH~~GK~H 169 (294)
+-|=.|-| |+. ..|..| | |+|||.||+|
T Consensus 321 ~LVNtVVG-FIGPEyLydgkQiiRAgLEDhF~GKL~ 355 (453)
T 3abq_A 321 FIVNTVVG-FIGPEYLYNDRQIIRAGLEDHFMGKLS 355 (453)
T ss_dssp SEEEEETT-SSCTTTSCBHHHHHHHHHHHHHHHHHT
T ss_pred ceEeecce-ecccceeecchhhhhcchHhhhhhhhc
Confidence 34555655 332 456555 3 8899999998
No 217
>2jl6_1 50S ribosomal protein L28, 50S ribosomal protein L25; methylation, translation, paromomycin, tRNA-binding, tRNA, zinc, mRNA, ribosome, repressor, RNA-binding; 3.45A {Thermus thermophilus} PDB: 2jl8_1
Probab=23.62 E-value=20 Score=27.47 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=9.8
Q ss_pred ccccccccccccC
Q 022656 142 ALCEICGSFLVAN 154 (294)
Q Consensus 142 ~VCeVCGA~Ls~~ 154 (294)
.+|+|||.-...+
T Consensus 3 r~C~itGK~~~~G 15 (89)
T 2jl6_1 3 KVCEISGKRPIVA 15 (89)
T ss_dssp CCCSSSCCCCEEE
T ss_pred CEeecCCCccccC
Confidence 6899999765544
No 218
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.42 E-value=20 Score=21.75 Aligned_cols=23 Identities=22% Similarity=0.358 Sum_probs=14.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2en6_A 10 EKPYGCNECGKTFSQK---SILSAHQ 32 (46)
T ss_dssp SCCEEETTTTEEESSH---HHHHHHH
T ss_pred CcCeECCCCCcccCch---HHHHHHH
Confidence 4668999999765543 3344453
No 219
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.20 E-value=17 Score=21.50 Aligned_cols=28 Identities=21% Similarity=0.451 Sum_probs=18.6
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|+ +.|.|
T Consensus 8 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 35 (41)
T 2ept_A 8 QRVYECQECGKSFRQ---KGSLTLHE--RIHTG 35 (41)
T ss_dssp CCCEECSSSCCEESS---HHHHHHHG--GGCCC
T ss_pred CCCeECCCCCCCcCC---HHHHHHHH--HHhCC
Confidence 466889999986543 34567775 35654
No 220
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.09 E-value=24 Score=21.36 Aligned_cols=23 Identities=30% Similarity=0.439 Sum_probs=15.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~ 32 (47)
T 2epx_A 10 KKPYECIECGKAFIQN---TSLIRHW 32 (47)
T ss_dssp CCSBCCSSSCCCBSSH---HHHHHHH
T ss_pred CCCEECCccCchhCCh---HHHHHHh
Confidence 4668999999865543 4466665
No 221
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.01 E-value=22 Score=21.51 Aligned_cols=23 Identities=26% Similarity=0.521 Sum_probs=15.3
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||...... .-|..|+
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQN---SHLTNHW 32 (46)
T ss_dssp SCSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCEeCCcCCCccCCH---HHHHHHH
Confidence 4668999999865543 4455554
No 222
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.96 E-value=17 Score=22.07 Aligned_cols=28 Identities=21% Similarity=0.420 Sum_probs=18.5
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||...... .-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG---SSLTVHQ--RIHTG 37 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH--TTTSS
T ss_pred CCCeeCcccCcccCCh---HHHHHHH--HHhCC
Confidence 4668999999865543 4566665 34554
No 223
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=22.74 E-value=2.2e+02 Score=20.65 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGK--VDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~--VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
..|......|..+...++.|...|. -+++..+-.+++.|+.....|....
T Consensus 50 ~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~ 101 (118)
T 3uul_A 50 MELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVES 101 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466677777888888888888775 4567778888888888777776544
No 224
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=22.68 E-value=24 Score=23.87 Aligned_cols=14 Identities=36% Similarity=0.890 Sum_probs=11.5
Q ss_pred cccccccccccccc
Q 022656 140 KMALCEICGSFLVA 153 (294)
Q Consensus 140 km~VCeVCGA~Ls~ 153 (294)
.+.+|+.||..+..
T Consensus 17 ~~~~C~~CG~~i~~ 30 (49)
T 2l8e_A 17 NLLKCEYCGKYAPA 30 (49)
T ss_dssp SEEECTTTCCEEEG
T ss_pred CCCcChhccCcccc
Confidence 45789999998775
No 225
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=22.67 E-value=45 Score=17.98 Aligned_cols=26 Identities=27% Similarity=0.631 Sum_probs=16.3
Q ss_pred ccccc--ccccccccCCchHHHHhhhccccccc
Q 022656 141 MALCE--ICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 141 m~VCe--VCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
..+|+ +||.-... ..-|..|. +.|.|
T Consensus 2 p~~C~~~~C~k~f~~---~~~L~~H~--~~H~~ 29 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTR---SDELQRHK--RTHTG 29 (31)
T ss_dssp CCBCCSTTCCCBCSS---HHHHHHHH--TTTSC
T ss_pred CcCCcCCCCCcccCC---HhHHHHHH--HHhcC
Confidence 36798 99976554 34566775 34544
No 226
>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1
Probab=22.49 E-value=2.6e+02 Score=21.30 Aligned_cols=45 Identities=13% Similarity=0.334 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 022656 36 AELAQFCEKLVMDLDRRVRRGRERLSQEVEPAPPPPISAEKSEQLSVLEEKIKNLLEQV 94 (294)
Q Consensus 36 ~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~~~~~~~~~~~~e~i~~l~ekI~~ll~ea 94 (294)
.+...+-..+|.|+-+||.+- +++ . . -.-+|.+|+.+|++|+.+-
T Consensus 24 ~~AekWR~qvikEIs~Kv~~I-----qn~--~----L---~E~~IRdLNDEINkL~rEK 68 (92)
T 1x4t_A 24 PKAEKWRRQIIGEISKKVAQI-----QNA--G----L---GEFRIRDLNDEINKLLREK 68 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----HHC--C----S---CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----hCC--C----C---CHHHHHHHHHHHHHHHHHH
Confidence 344555566777777776554 332 1 1 1247889999999998764
No 227
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.46 E-value=22 Score=21.59 Aligned_cols=28 Identities=29% Similarity=0.472 Sum_probs=17.7
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-... ..-|..|. +.|.|
T Consensus 10 ~k~~~C~~C~k~f~~---~~~L~~H~--~~H~~ 37 (46)
T 2em7_A 10 EKPYKCEECGKGFIC---RRDLYTHH--MVHTG 37 (46)
T ss_dssp CCSEECSSSCCEESC---HHHHHHHG--GGGTT
T ss_pred CcCccCCCccchhCC---HHHHHHHH--HHhCC
Confidence 466899999975443 34466664 34544
No 228
>2qez_A Ethanolamine ammonia-lyase heavy chain; ethanol ammonia lyase large subunit (EUTB), structural genomics; HET: MSE; 2.15A {Listeria monocytogenes serotype 4B}
Probab=22.42 E-value=17 Score=35.21 Aligned_cols=28 Identities=25% Similarity=0.478 Sum_probs=17.4
Q ss_pred cccccccccccc---cCCchH--H--HHhhhccccc
Q 022656 141 MALCEICGSFLV---ANDAAE--R--TQSHISGKQH 169 (294)
Q Consensus 141 m~VCeVCGA~Ls---~~D~d~--R--l~dH~~GK~H 169 (294)
+-|=.|-| |+. ..|..| | |+|||.||+|
T Consensus 322 ~LVNtVVG-FIGPEyLydgkQiiRAgLEDhF~GKLl 356 (455)
T 2qez_A 322 FLVNTVVG-FIGPEYLYDSKQVIRAGLEDHFMGKLT 356 (455)
T ss_dssp EEEEEEEE-C------CCTHHHHHHHHHHHHHHHHH
T ss_pred ceEeecce-ecccceeecchhhhhcchHhhhhhhhc
Confidence 34555656 322 456655 3 8899999998
No 229
>3v2d_1 50S ribosomal protein L28; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2j03_1 2v47_1 2v49_1 2wdi_1 2wdj_1 2wdl_1 2wdn_1 2wh2_1 2wh4_1 2wrj_1 2wrl_1 2wro_1 2wrr_1 2x9s_1 2x9u_1 2xqe_1 2xtg_1 2xux_1 2y0v_1 2y0x_1 ...
Probab=22.26 E-value=21 Score=27.72 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=9.9
Q ss_pred ccccccccccccC
Q 022656 142 ALCEICGSFLVAN 154 (294)
Q Consensus 142 ~VCeVCGA~Ls~~ 154 (294)
.+|+|||.-...+
T Consensus 3 r~C~itGK~p~~G 15 (98)
T 3v2d_1 3 KVCEISGKRPIVA 15 (98)
T ss_dssp CCCTTTCCCCEEE
T ss_pred CeeecCCCccccC
Confidence 6899999865544
No 230
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.18 E-value=19 Score=21.83 Aligned_cols=28 Identities=36% Similarity=0.616 Sum_probs=18.1
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~~~~~C~~C~k~f~~~---~~L~~H~--~~H~~ 37 (46)
T 2en1_A 10 EKPFKCEECGKRFTQN---SQLHSHQ--RVHTG 37 (46)
T ss_dssp CCSEEETTTTEEESSH---HHHHHHG--GGGSC
T ss_pred CCCeeCCCCCcccCCH---HHHHHHH--HHcCC
Confidence 4668999999765543 4466665 34544
No 231
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=22.13 E-value=3.3e+02 Score=22.36 Aligned_cols=51 Identities=22% Similarity=0.158 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 76 KSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 76 ~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
....|....++|..+...++.|...|..+ +..+...++.|......|.+.+
T Consensus 164 f~~~l~~~~~~v~~l~~~~~~L~~~~h~~-~~~I~~~~~~l~~rW~~l~~~l 214 (218)
T 3fb2_A 164 FDKAINVQEEKIAALQAFADQLIAAGHYA-KGDISSRRNEVLDRWRRLKAQM 214 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTT-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788899999999999999998875 5678888888888887776654
No 232
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=22.10 E-value=1.8e+02 Score=19.51 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 022656 39 AQFCEKLVMDLDRRVRRGRERLS 61 (294)
Q Consensus 39 l~~L~~lI~d~dRkI~~~k~RL~ 61 (294)
..-|+..+.+|..++..-+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~ 29 (60)
T 3htk_A 7 KKTLENQVEELTEKCSLKTDEFL 29 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666555555555553
No 233
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=22.09 E-value=26 Score=22.44 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=16.7
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||..... ..-|..|+. +.|.|
T Consensus 28 ~~~~~C~~C~~~f~~---~~~l~~H~~-~~H~~ 56 (60)
T 2adr_A 28 EKPYPCGLCNRAFTR---RDLLIRHAQ-KIHSG 56 (60)
T ss_dssp SCSEECTTTCCEESS---HHHHHHHHT-TTSCC
T ss_pred CCCccCCCCCCccCC---HHHHHHHHH-HHcCC
Confidence 355788888875432 344666653 34543
No 234
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=22.07 E-value=19 Score=26.41 Aligned_cols=17 Identities=24% Similarity=0.724 Sum_probs=11.4
Q ss_pred hhccccccccccccccC
Q 022656 138 EKKMALCEICGSFLVAN 154 (294)
Q Consensus 138 ~qkm~VCeVCGA~Ls~~ 154 (294)
..+..+|++||.-....
T Consensus 25 ~~~~h~C~~Cgk~F~~~ 41 (85)
T 2lv2_A 25 SAECHLCPVCGESFASK 41 (85)
T ss_dssp CCTTEECTTSCCEESSH
T ss_pred CCCCEECCCCCCCcCcH
Confidence 34567899998755443
No 235
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.82 E-value=19 Score=21.91 Aligned_cols=23 Identities=26% Similarity=0.434 Sum_probs=15.7
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||...... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ene_A 10 EKPYKCNECGKVFRHN---SYLSRHQ 32 (46)
T ss_dssp SSSEECSSSCCEESSH---HHHHHHH
T ss_pred CCCeECCCCCchhCCh---HHHHHHH
Confidence 4668999999765443 4466665
No 236
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=21.73 E-value=74 Score=21.70 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=15.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 022656 75 EKSEQLSVLEEKIKNLLEQVETLG 98 (294)
Q Consensus 75 ~~~e~i~~l~ekI~~ll~eaE~LG 98 (294)
....++.+|..+|..|++++++|-
T Consensus 23 aLk~E~~eLk~k~~~L~~~~~el~ 46 (53)
T 2yy0_A 23 LLRLELAEMKEKYEAIVEENKKLK 46 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777777777776663
No 237
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.72 E-value=26 Score=21.21 Aligned_cols=23 Identities=22% Similarity=0.391 Sum_probs=14.9
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 10 ~k~~~C~~C~k~f~~~---~~L~~H~ 32 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRH---THLNEHR 32 (46)
T ss_dssp CCSEECSSSCCEESSH---HHHHHHH
T ss_pred CcCeECCCCCCeeCCh---HHHHHHH
Confidence 4568999999765433 3455554
No 238
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=21.68 E-value=18 Score=22.97 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=14.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+..+|++||.-... ..-|..|+
T Consensus 27 ~~~~~C~~C~~~f~~---~~~l~~H~ 49 (57)
T 1bbo_A 27 VRPYHCTYCNFSFKT---KGNLTKHM 49 (57)
T ss_dssp CCCEECSSSSCEESS---HHHHHHHH
T ss_pred CCCccCCCCCchhcC---HHHHHHHH
Confidence 456889999975443 34455554
No 239
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.61 E-value=19 Score=21.89 Aligned_cols=28 Identities=29% Similarity=0.472 Sum_probs=17.9
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+...|++||.-.... .-|..|+ +.|.|
T Consensus 10 ~k~~~C~~C~k~F~~~---~~L~~H~--~~H~~ 37 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRN---SHLARHQ--LIHTG 37 (46)
T ss_dssp CCCEECTTTCCEESSH---HHHHHHH--TTTCC
T ss_pred CCCeECCCCCchhCCH---HHHHHHH--HHcCC
Confidence 4668999999765433 4566665 34544
No 240
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=21.12 E-value=1.2e+02 Score=25.70 Aligned_cols=10 Identities=20% Similarity=0.079 Sum_probs=5.0
Q ss_pred cccccccccc
Q 022656 143 LCEICGSFLV 152 (294)
Q Consensus 143 VCeVCGA~Ls 152 (294)
+|++||..|.
T Consensus 143 tcP~t~~~l~ 152 (179)
T 2f42_A 143 FDPVTRSPLT 152 (179)
T ss_dssp BCTTTCCBCC
T ss_pred CCCCCcCCCC
Confidence 4555555443
No 241
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=21.11 E-value=39 Score=32.42 Aligned_cols=28 Identities=14% Similarity=0.474 Sum_probs=20.7
Q ss_pred ccccccccc-----ccccCCchHHHHhhhcccccc
Q 022656 141 MALCEICGS-----FLVANDAAERTQSHISGKQHI 170 (294)
Q Consensus 141 m~VCeVCGA-----~Ls~~D~d~Rl~dH~~GK~Hl 170 (294)
..+||||+- +.++++ .=-+-|+.|+-|.
T Consensus 360 ~~~Ce~C~~~~~~~~~~~ge--~~W~~H~ksr~Hk 392 (409)
T 3eph_A 360 HYTCNVCRNADGKNVVAIGE--KYWKIHLGSRRHK 392 (409)
T ss_dssp EEEEEEEECTTSCEEEEESH--HHHHHHHTSHHHH
T ss_pred ceeCCCCCCCCCCcceEEcH--HHHHHHhhhhHHH
Confidence 468999996 355664 3456799999995
No 242
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=21.05 E-value=3.5e+02 Score=22.21 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 76 KSEQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 76 ~~e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
....|..+..+|..+...+..|...+--+.|..+...++.|....+.|....
T Consensus 152 ~e~dL~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~ 203 (218)
T 3edu_A 152 FERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDAC 203 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999998766678888888999888887776544
No 243
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=20.94 E-value=29 Score=20.86 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=14.4
Q ss_pred ccccccccccccCCchHHHHhhhc
Q 022656 142 ALCEICGSFLVANDAAERTQSHIS 165 (294)
Q Consensus 142 ~VCeVCGA~Ls~~D~d~Rl~dH~~ 165 (294)
..|.||.+.+.- ..=+..||.
T Consensus 4 ~~CpvCk~q~Pd---~kt~~~H~e 24 (28)
T 2jvx_A 4 FCCPKCQYQAPD---MDTLQIHVM 24 (28)
T ss_dssp EECTTSSCEESS---HHHHHHHHH
T ss_pred ccCccccccCcC---hHHHHHHHH
Confidence 579999987543 234677775
No 244
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=20.91 E-value=24 Score=22.10 Aligned_cols=29 Identities=24% Similarity=0.466 Sum_probs=19.0
Q ss_pred hccccccccccccccCCchHHHHhhhccccccc
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHISGKQHIG 171 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~~GK~HlG 171 (294)
.+..+|++||.-... ..-|..|+. +.|.|
T Consensus 5 ~kp~~C~~C~k~F~~---~~~L~~H~~-~~H~~ 33 (48)
T 3iuf_A 5 DKPYACDICGKRYKN---RPGLSYHYA-HSHLA 33 (48)
T ss_dssp TSCEECTTTCCEESS---HHHHHHHHH-HSSCC
T ss_pred CcCEECCCcCcccCC---HHHHHHHhh-hhcCC
Confidence 456899999965433 344777762 26776
No 245
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=20.87 E-value=5.8e+02 Score=24.81 Aligned_cols=48 Identities=15% Similarity=0.286 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHHHHHHHH-----------HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 75 EKSEQLSVLEEKIKNLLEQ-----------VETLGEAGKVDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 75 ~~~e~i~~l~ekI~~ll~e-----------aE~LGeeG~VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
++..+...++.+|+.+.+. +++| +.++..+-+++..|.++..++++++
T Consensus 88 ~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l-----~~~~~~l~~~i~~l~~~~~~~~~~l 146 (501)
T 1wle_A 88 SLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSL-----RARGREIRKQLTLLYPKEAQLEEQF 146 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCccccccccccHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777777766532 3344 3455566666666666666666554
No 246
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=20.61 E-value=2.5e+02 Score=20.33 Aligned_cols=51 Identities=24% Similarity=0.298 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 022656 77 SEQLSVLEEKIKNLLEQVETLGEAGK--VDEAEALMRKVEILNVEKTTLTQQS 127 (294)
Q Consensus 77 ~e~i~~l~ekI~~ll~eaE~LGeeG~--VdeA~~l~~~ve~Lk~er~~l~~~~ 127 (294)
...|......|..+...++.|...|. -+.+..+-.+++.|+.....|....
T Consensus 49 ~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~ 101 (119)
T 3uun_A 49 MMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVAS 101 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777888888888888775 4566777888888888777776544
No 247
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=20.44 E-value=1.5e+02 Score=23.13 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC--CCCCCC----chhhHHHHHHHHHHHHHHHHHHHHHHh
Q 022656 34 FEAELAQFCEKLVMDLDRRVRRGRERLSQEVEP--APPPPI----SAEKSEQLSVLEEKIKNLLEQVETLGE 99 (294)
Q Consensus 34 YE~e~l~~L~~lI~d~dRkI~~~k~RL~~~~e~--~~~~~~----~~~~~e~i~~l~ekI~~ll~eaE~LGe 99 (294)
|-..-+..|+.=|...+..+-.|..+|...... ..+... ...-...|..|+.+|.+|-..+-.+..
T Consensus 32 ~tM~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~Vsalq~KiaeLKrqLAd~va 103 (107)
T 2k48_A 32 FTMSTLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAAVSTLETKLGELKRQLADLVA 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555666677777888888643210 000000 001123466677777666655554443
No 248
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=20.43 E-value=1.5e+02 Score=28.61 Aligned_cols=40 Identities=20% Similarity=0.195 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 022656 78 EQLSVLEEKIKNLLEQVETLGEAGKVDEAEALMRKVEILN 117 (294)
Q Consensus 78 e~i~~l~ekI~~ll~eaE~LGeeG~VdeA~~l~~~ve~Lk 117 (294)
+.|..+......++++++.|-.+|+.++|..+..++=.+.
T Consensus 300 e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~ 339 (490)
T 3n71_A 300 EVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQ 339 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 5677777778889999999999999999999887765554
No 249
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=20.20 E-value=33 Score=21.55 Aligned_cols=11 Identities=36% Similarity=0.579 Sum_probs=6.1
Q ss_pred ccccccccccc
Q 022656 140 KMALCEICGSF 150 (294)
Q Consensus 140 km~VCeVCGA~ 150 (294)
+...|++||.-
T Consensus 31 ~~~~C~~C~~~ 41 (57)
T 3uk3_C 31 KPYKCEFCEYA 41 (57)
T ss_dssp CCEECSSSSCE
T ss_pred CCcCCCCCcch
Confidence 34566666643
No 250
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.13 E-value=29 Score=20.93 Aligned_cols=23 Identities=26% Similarity=0.570 Sum_probs=14.8
Q ss_pred hccccccccccccccCCchHHHHhhh
Q 022656 139 KKMALCEICGSFLVANDAAERTQSHI 164 (294)
Q Consensus 139 qkm~VCeVCGA~Ls~~D~d~Rl~dH~ 164 (294)
.+...|++||.-.... .-|..|+
T Consensus 8 ~k~~~C~~C~k~f~~~---~~l~~H~ 30 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRK---DRMSYHV 30 (45)
T ss_dssp CCSSEETTTTEECSCH---HHHHHHH
T ss_pred CCCCcCCCCCcccCCH---HHHHHHH
Confidence 4668999999765543 3355554
Done!