Your job contains 1 sequence.
>022657
MGLLQLNLALSSSTSSLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSRIRCSAKVDNGS
VVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDP
SYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQ
KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL
VNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022657
(294 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065264 - symbol:ISPD species:3702 "Arabidopsi... 925 7.0e-93 1
TIGR_CMR|BA_0084 - symbol:BA_0084 "2-C-methyl-D-erythrito... 369 5.8e-34 1
TIGR_CMR|DET_0059 - symbol:DET_0059 "2-C-methyl-D-erythri... 342 4.2e-31 1
TIGR_CMR|CHY_2342 - symbol:CHY_2342 "2-C-methyl-D-erythri... 320 9.1e-29 1
TIGR_CMR|SO_3438 - symbol:SO_3438 "4-diphosphocytidyl-2C-... 311 8.2e-28 1
TIGR_CMR|GSU_3368 - symbol:GSU_3368 "4-diphosphocytidyl-2... 294 5.2e-26 1
TIGR_CMR|CPS_1072 - symbol:CPS_1072 "2-C-methyl-D-erythri... 280 1.6e-24 1
UNIPROTKB|Q46893 - symbol:ispD "4-diphosphocytidyl-2C-met... 274 6.8e-24 1
UNIPROTKB|Q9KUJ2 - symbol:ispD "2-C-methyl-D-erythritol 4... 272 1.1e-23 1
TIGR_CMR|VC_0528 - symbol:VC_0528 "4-diphosphocytidyl-2C-... 272 1.1e-23 1
UNIPROTKB|P96864 - symbol:ispD "2-C-methyl-D-erythritol 4... 219 4.6e-18 1
TIGR_CMR|SPO_2090 - symbol:SPO_2090 "2-C-methyl-D-erythri... 216 2.4e-17 1
TIGR_CMR|ECH_0157 - symbol:ECH_0157 "2-C-methyl-D-erythri... 210 4.1e-17 1
ZFIN|ZDB-GENE-061110-16 - symbol:ispd "isoprenoid synthas... 212 1.3e-16 1
UNIPROTKB|F1NM25 - symbol:F1NM25 "Uncharacterized protein... 198 2.7e-15 1
UNIPROTKB|A4D126 - symbol:ISPD "Isoprenoid synthase domai... 199 3.3e-15 1
TIGR_CMR|NSE_0178 - symbol:NSE_0178 "putative 2-C-methyl-... 179 7.9e-14 1
TIGR_CMR|APH_1277 - symbol:APH_1277 "2-C-methyl-D-erythri... 178 1.0e-13 1
UNIPROTKB|F1SEJ2 - symbol:LOC100623666 "Uncharacterized p... 186 1.1e-13 1
UNIPROTKB|E1BCH6 - symbol:ISPD "Isoprenoid synthase domai... 188 3.0e-13 1
UNIPROTKB|J9NYK6 - symbol:ISPD "Uncharacterized protein" ... 187 4.2e-13 1
UNIPROTKB|Q28CZ7 - symbol:ispd "Isoprenoid synthase domai... 185 8.8e-13 1
RGD|1359368 - symbol:Ispd "isoprenoid synthase domain con... 184 1.5e-12 1
UNIPROTKB|Q5S6T3 - symbol:Ispd "Isoprenoid synthase domai... 184 1.5e-12 1
MGI|MGI:1923097 - symbol:Ispd "isoprenoid synthase domain... 181 4.4e-12 1
GENEDB_PFALCIPARUM|PFA0340w - symbol:PFA0340w "2-C-methyl... 103 6.6e-10 3
UNIPROTKB|Q8I273 - symbol:PFA_0340w "2-C-methyl-D-erythri... 103 6.6e-10 3
TIGR_CMR|CJE_1779 - symbol:CJE_1779 "ispD/ispF bifunction... 148 4.7e-08 1
>TAIR|locus:2065264 [details] [associations]
symbol:ISPD species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009536 "plastid" evidence=NAS]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA;TAS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0000096 "sulfur amino
acid metabolic process" evidence=RCA] [GO:0006546 "glycine
catabolic process" evidence=RCA] [GO:0006636 "unsaturated fatty
acid biosynthetic process" evidence=RCA] [GO:0006733
"oxidoreduction coenzyme metabolic process" evidence=RCA]
[GO:0006766 "vitamin metabolic process" evidence=RCA] [GO:0008652
"cellular amino acid biosynthetic process" evidence=RCA]
[GO:0009072 "aromatic amino acid family metabolic process"
evidence=RCA] [GO:0009106 "lipoate metabolic process" evidence=RCA]
[GO:0009108 "coenzyme biosynthetic process" evidence=RCA]
[GO:0009117 "nucleotide metabolic process" evidence=RCA]
[GO:0009416 "response to light stimulus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0015994
"chlorophyll metabolic process" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016117
"carotenoid biosynthetic process" evidence=RCA] [GO:0019216
"regulation of lipid metabolic process" evidence=RCA] [GO:0019748
"secondary metabolic process" evidence=RCA] [GO:0031408 "oxylipin
biosynthetic process" evidence=RCA] [GO:0044272 "sulfur compound
biosynthetic process" evidence=RCA] InterPro:IPR001228
InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016023
GO:GO:0016114 EMBL:AC004136 HOGENOM:HOG000218563 GO:GO:0019288
GO:GO:0050518 TIGRFAMs:TIGR00453 EMBL:AF230737 EMBL:AB037876
EMBL:AK118110 EMBL:BT006120 IPI:IPI00546361 PIR:T00613
RefSeq:NP_565286.1 UniGene:At.10212 PDB:1W77 PDB:2YC3 PDB:2YC5
PDB:2YCM PDBsum:1W77 PDBsum:2YC3 PDBsum:2YC5 PDBsum:2YCM
ProteinModelPortal:P69834 SMR:P69834 STRING:P69834 PaxDb:P69834
PRIDE:P69834 EnsemblPlants:AT2G02500.1 GeneID:814779
KEGG:ath:AT2G02500 GeneFarm:4908 TAIR:At2g02500 eggNOG:COG1211
InParanoid:P69834 KO:K00991 OMA:FPQGAIL PhylomeDB:P69834
ProtClustDB:PLN02728 BioCyc:ARA:AT2G02500-MONOMER
BioCyc:MetaCyc:AT2G02500-MONOMER EvolutionaryTrace:P69834
Genevestigator:P69834 GermOnline:AT2G02500 Uniprot:P69834
Length = 302
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 179/221 (80%), Positives = 202/221 (91%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
ILLAGG+GKRM +MPKQY+PLLGQPIALYSF+TFSRM EVKEIVVVCDP + DIFEE +
Sbjct: 82 ILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYE 141
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHDSARPLV ++DV+KVL D VG
Sbjct: 142 ESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVG 201
Query: 191 AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTD 250
AAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQVIKP+LLKKGFELV EGLEVTD
Sbjct: 202 AAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEVTD 261
Query: 251 DVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
DVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+ S
Sbjct: 262 DVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSEDS 302
>TIGR_CMR|BA_0084 [details] [associations]
symbol:BA_0084 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:198094 "Bacillus anthracis str. Ames"
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
[GO:0050518 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase activity" evidence=ISS] HAMAP:MF_00108
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
UniPathway:UPA00056 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR HOGENOM:HOG000218563 GO:GO:0019288
GO:GO:0050518 TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991
RefSeq:NP_842653.1 RefSeq:YP_016689.1 RefSeq:YP_026371.1
ProteinModelPortal:Q81VV5 DNASU:1088223
EnsemblBacteria:EBBACT00000008482 EnsemblBacteria:EBBACT00000016132
EnsemblBacteria:EBBACT00000020721 GeneID:1088223 GeneID:2814915
GeneID:2850394 KEGG:ban:BA_0084 KEGG:bar:GBAA_0084 KEGG:bat:BAS0085
OMA:IIGQPKD ProtClustDB:PRK00155 BioCyc:BANT260799:GJAJ-96-MONOMER
BioCyc:BANT261594:GJ7F-98-MONOMER Uniprot:Q81VV5
Length = 226
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 87/224 (38%), Positives = 126/224 (56%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 5 IIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEELM 64
Query: 131 EKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
+K V+ ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A +
Sbjct: 65 QKYPVEKPVQFIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAAEK 123
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 124 YGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCFLG 182
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 292
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 183 TDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>TIGR_CMR|DET_0059 [details] [associations]
symbol:DET_0059 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:243164 "Dehalococcoides ethenogenes
195" [GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_00108 InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056 EMBL:CP000027
GenomeReviews:CP000027_GR HOGENOM:HOG000218563 GO:GO:0019288
GO:GO:0050518 TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991
OMA:IIGQPKD ProtClustDB:PRK00155 RefSeq:YP_180812.1
ProteinModelPortal:Q3ZAD7 STRING:Q3ZAD7 GeneID:3229038
KEGG:det:DET0059 PATRIC:21607217 BioCyc:DETH243164:GJNF-59-MONOMER
Uniprot:Q3ZAD7
Length = 227
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 84/219 (38%), Positives = 126/219 (57%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEI-VVVCDPSYSDIFEET 129
+++A G+ +RMG K + L G+P+ ++ F + E+ +I +VV + + E
Sbjct: 10 VIVAAGQSRRMGGQ-DKIFARLSGKPVLAHTLSVFQQSPEIDDIALVVSEHNLKKAKELV 68
Query: 130 KE-KINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
KE + + G+ RQDSV SGL + + V IHD ARPL+ + + L A
Sbjct: 69 KEYNFSKVIAICSGGELRQDSVSSGLTAL-CDCGWVLIHDGARPLLDPVSIPEGLEAAKL 127
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
G+AV VP K T+KE + E V +TL R+ L +QTPQV + D+++K + R G+
Sbjct: 128 CGSAVAAVPLKDTVKEISPEGLVEKTLPREKLISVQTPQVFRADIIQKAYR---RVGITA 184
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
TDD +VE LK PV I G+Y NIK+TTP+DLL+AE +L
Sbjct: 185 TDDAQLVEKLKLPVKIFSGAYANIKITTPEDLLMAEILL 223
>TIGR_CMR|CHY_2342 [details] [associations]
symbol:CHY_2342 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=ISS]
[GO:0050518 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase activity" evidence=ISS] HAMAP:MF_00108
InterPro:IPR001228 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056
EMBL:CP000141 GenomeReviews:CP000141_GR HOGENOM:HOG000218563
GO:GO:0019288 GO:GO:0050518 TIGRFAMs:TIGR00453 eggNOG:COG1211
KO:K00991 RefSeq:YP_361147.1 ProteinModelPortal:Q3A9N7
STRING:Q3A9N7 GeneID:3728481 KEGG:chy:CHY_2342 PATRIC:21277751
OMA:ALKITRP BioCyc:CHYD246194:GJCN-2341-MONOMER Uniprot:Q3A9N7
Length = 233
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 72/219 (32%), Positives = 120/219 (54%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+ AGG G+R G PKQ+L L G P+ + + + V ++V+ +Y ++ +
Sbjct: 7 IVTAGGAGRRFGGEKPKQFLELSGIPVIIITLKRMVNLPIVGQVVLTVPENYIEVAGDLL 66
Query: 131 EKINV-DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPL----VLSKDVQKVLMD 185
+ N+ +K + G R++SV G++ + N ++ +HD RP LS+ V+K L +
Sbjct: 67 SRYNLAGIKLTAGGTTRRESVLRGIRALTGNFSIIAVHDGVRPFFPKGALSEGVKK-LSE 125
Query: 186 ALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREG 245
G A+L VP + T+KE ++ V+ TLDR L+ +QTPQ+ + + L KG L ++
Sbjct: 126 GY--GGAILAVPLRDTVKEVK-DNVVISTLDRSRLYAVQTPQIFRREALLKGHALGEKQH 182
Query: 246 LEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAE 284
L+ DD +VE V + G Y N+K+T P+DL AE
Sbjct: 183 LDAVDDSILVELCGETVAVIPGDYKNLKITWPEDLEFAE 221
>TIGR_CMR|SO_3438 [details] [associations]
symbol:SO_3438 "4-diphosphocytidyl-2C-methyl-D-erythritol
synthase" species:211586 "Shewanella oneidensis MR-1" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_00108 InterPro:IPR001228 Pfam:PF01128
PROSITE:PS01295 UniPathway:UPA00056 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0019288 GO:GO:0050518
TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991 OMA:FPQGAIL
ProtClustDB:PRK00155 HOGENOM:HOG000218564 RefSeq:NP_718991.1
ProteinModelPortal:Q8EBR2 GeneID:1171113 KEGG:son:SO_3438
PATRIC:23526564 Uniprot:Q8EBR2
Length = 249
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 77/218 (35%), Positives = 115/218 (52%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+ A G G RMGA PKQYLPLLGQ I ++ + +++V P +D + +
Sbjct: 29 IVPAAGIGSRMGAGKPKQYLPLLGQSILAHTLDKLLSHPLISQVIVALHPEDADFYALPQ 88
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
K + LK + G ER +SV + L + NS + +HD+ARP +++ D+ K+L ++
Sbjct: 89 AK-HPKLKTVIGGSERANSVLAALDKAPDNSWAL-VHDAARPCLMASDIDKLLTSRVQFP 146
Query: 191 -AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVT 249
A+L +P + T+K ANS + T+ R LW TPQ+ LL+ + G VT
Sbjct: 147 QGAILAMPVRDTMKRANSLGEINSTVCRDNLWHALTPQLFPTSLLRLHLQGALNAGAVVT 206
Query: 250 DDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
D+ S +E + G NIKVT PDDL +AE L
Sbjct: 207 DEASAMEWAGISPGLVAGRADNIKVTHPDDLELAELFL 244
>TIGR_CMR|GSU_3368 [details] [associations]
symbol:GSU_3368 "4-diphosphocytidyl-2C-methyl-D-erythritol
synthase" species:243231 "Geobacter sulfurreducens PCA" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_00108 InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000218563 GO:GO:0019288
GO:GO:0050518 TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991
OMA:IIGQPKD ProtClustDB:PRK00155 RefSeq:NP_954408.1
ProteinModelPortal:Q746Z9 GeneID:2688221 KEGG:gsu:GSU3368
PATRIC:22029591 BioCyc:GSUL243231:GH27-3318-MONOMER Uniprot:Q746Z9
Length = 232
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 76/221 (34%), Positives = 114/221 (51%)
Query: 74 AGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF--EETKE 131
A G GKRMGA++ KQYL L G+PI ++ F V I V+ P F + E
Sbjct: 9 AAGMGKRMGASINKQYLILAGRPILAHTLSVFEGASFVDGIFVIT-PEDEIPFCRDHVVE 67
Query: 132 KINVDLKFSLP--GKERQDSVYSGLQEVD---FNSELVCIHDSARPLVLSKDVQKVLMDA 186
+ + G ERQ SV +GL+ ++ + +++ IHD RP V + + + A
Sbjct: 68 RYGFTKVRGIVAGGAERQHSVLNGLRAMEGTVADDDVILIHDGVRPFVSTDVLARATAVA 127
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
A++ VPAK T+K + + T R+TLW QTPQ + +++ E+ + E
Sbjct: 128 REDDGALVAVPAKDTVKTVE-DGIITGTPPRETLWLAQTPQAFRYAVIRAAHEIADAERF 186
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
TDD +VE L V I G Y NIK+TTP+D+++AE L
Sbjct: 187 LGTDDAMLVERLGRSVRIVVGDYRNIKITTPEDMVLAEAFL 227
>TIGR_CMR|CPS_1072 [details] [associations]
symbol:CPS_1072 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:167879 "Colwellia psychrerythraea
34H" [GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_00108 InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0019288 GO:GO:0050518
TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991 OMA:IIGQPKD
RefSeq:YP_267816.1 ProteinModelPortal:Q487E9 STRING:Q487E9
GeneID:3522280 KEGG:cps:CPS_1072 PATRIC:21465415
HOGENOM:HOG000218564 BioCyc:CPSY167879:GI48-1154-MONOMER
Uniprot:Q487E9
Length = 243
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 73/234 (31%), Positives = 118/234 (50%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+ A G GKRM AN PKQYL + + I ++ + +++V F E++
Sbjct: 10 IVPAAGVGKRMQANCPKQYLRINNETILSHTVMRLLSHPLISQVIVALGTE-DQYFAESE 68
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNS-ELVCIHDSARPLVLSKDVQKVLMDALRV 189
+ D+ G ER +SV +GL+ VD + V +HD+ARP V +D+ K++ LR
Sbjct: 69 LAHHKDIIRVNGGTERVNSVLNGLKAVDSDKYPWVLVHDAARPCVSHQDIDKLITRCLRK 128
Query: 190 G-AAVLGVPAKATIKE-------ANSESFVVR-TLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+L P + T+K A ++ ++ T++R+ LW TPQ+ K D L E
Sbjct: 129 DYGGILATPVRDTMKRGVLIKDSAKGDNTIIESTVEREQLWHALTPQMYKTDELTLAIEQ 188
Query: 241 VNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS 294
L++TD+ S +E P + S NIK+T P+DL +AE LN + ++
Sbjct: 189 ALENSLKITDEASAIEQANLPSLLVSASSENIKITHPNDLALAEFYLNKQANNT 242
>UNIPROTKB|Q46893 [details] [associations]
symbol:ispD "4-diphosphocytidyl-2C-methyl-D-erythritol
synthetase monomer" species:83333 "Escherichia coli K-12"
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=IEA;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] HAMAP:MF_00108 InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006744 EMBL:U29579 GO:GO:0019288 GO:GO:0050518
TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991 OMA:IIGQPKD
ProtClustDB:PRK00155 HOGENOM:HOG000218564 EMBL:AF230736
EMBL:AB037143 PIR:G65055 RefSeq:NP_417227.1 RefSeq:YP_490956.1
PDB:1H3M PDB:1I52 PDB:1INI PDB:1INJ PDB:1VGT PDB:1VGU PDB:3N9W
PDBsum:1H3M PDBsum:1I52 PDBsum:1INI PDBsum:1INJ PDBsum:1VGT
PDBsum:1VGU PDBsum:3N9W ProteinModelPortal:Q46893 SMR:Q46893
IntAct:Q46893 EnsemblBacteria:EBESCT00000002647
EnsemblBacteria:EBESCT00000015791 GeneID:12933286 GeneID:948269
KEGG:ecj:Y75_p2685 KEGG:eco:b2747 PATRIC:32120900 EchoBASE:EB2913
EcoGene:EG13110 BioCyc:EcoCyc:G7423-MONOMER
BioCyc:ECOL316407:JW2717-MONOMER BioCyc:MetaCyc:G7423-MONOMER
SABIO-RK:Q46893 EvolutionaryTrace:Q46893 Genevestigator:Q46893
Uniprot:Q46893
Length = 236
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 72/218 (33%), Positives = 110/218 (50%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
++ A G G+RM PKQYL + Q I +S + VK +V+ P S F +
Sbjct: 11 VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSR-FAQLP 69
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM--DALR 188
+ + G ER DSV +GL+ +++ V +HD+ARP + D+ ++L + R
Sbjct: 70 LANHPQITVVDGGDERADSVLAGLKAAG-DAQWVLVHDAARPCLHQDDLARLLALSETSR 128
Query: 189 VGAAVLGVPAKATIKEAN-SESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE 247
G +L P + T+K A ++ + T+DR LW TPQ +LL EG
Sbjct: 129 TGG-ILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGAT 187
Query: 248 VTDDVSIVEHLK-HPVYITEGSYTNIKVTTPDDLLIAE 284
+TD+ S +E+ HP + EG NIKVT P+DL +AE
Sbjct: 188 ITDEASALEYCGFHP-QLVEGRADNIKVTRPEDLALAE 224
>UNIPROTKB|Q9KUJ2 [details] [associations]
symbol:ispD "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:243277 "Vibrio cholerae O1 biovar El
Tor str. N16961" [GO:0008299 "isoprenoid biosynthetic process"
evidence=ISS] [GO:0050518 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase activity" evidence=ISS] HAMAP:MF_00108
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
UniPathway:UPA00056 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008299 GO:GO:0019288 GO:GO:0050518 TIGRFAMs:TIGR00453
eggNOG:COG1211 KO:K00991 ProtClustDB:PRK00155 OMA:ALKITRP
PIR:C82311 RefSeq:NP_230179.1 ProteinModelPortal:Q9KUJ2
DNASU:2615819 GeneID:2615819 KEGG:vch:VC0528 PATRIC:20080160
Uniprot:Q9KUJ2
Length = 232
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 75/232 (32%), Positives = 119/232 (51%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDI-F 126
I+ A G G RM A+ PKQYL LL + + ++ ++ +VV DP ++++
Sbjct: 7 IVPAAGVGSRMQADRPKQYLTLLDKTVLEHTVEHLLEHPLIEHVVVAVSADDPYFANLPL 66
Query: 127 EETKEKINVDLKFSLPGKERQDSVYSGLQEVDFN--SELVCIHDSARPLVLSKDVQKVLM 184
I VD GKER DSV S L+ V + SE V +HD+ARP V D+ +++
Sbjct: 67 AHHPRVIRVD-----GGKERADSVLSALEYVCQHRLSEWVLVHDAARPCVTHADITQLIT 121
Query: 185 DALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
AL +GA +L P + T+K + +V T+DR LW TPQ+ + L++
Sbjct: 122 TALAHPIGA-ILASPVRDTMKRGDHLQQIVHTVDRTALWHALTPQMFRAQSLRERLFAAL 180
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS 294
++ + +TD+ S E + G N+K+T P+DL +AE L+ + E S
Sbjct: 181 QQQVTITDEASAFEWRGEKPALVAGRADNLKITQPEDLALAEFYLSRNKEKS 232
>TIGR_CMR|VC_0528 [details] [associations]
symbol:VC_0528 "4-diphosphocytidyl-2C-methyl-D-erythritol
synthase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
[GO:0050518 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase activity" evidence=ISS] HAMAP:MF_00108
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
UniPathway:UPA00056 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008299 GO:GO:0019288 GO:GO:0050518 TIGRFAMs:TIGR00453
eggNOG:COG1211 KO:K00991 ProtClustDB:PRK00155 OMA:ALKITRP
PIR:C82311 RefSeq:NP_230179.1 ProteinModelPortal:Q9KUJ2
DNASU:2615819 GeneID:2615819 KEGG:vch:VC0528 PATRIC:20080160
Uniprot:Q9KUJ2
Length = 232
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 75/232 (32%), Positives = 119/232 (51%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSYSDI-F 126
I+ A G G RM A+ PKQYL LL + + ++ ++ +VV DP ++++
Sbjct: 7 IVPAAGVGSRMQADRPKQYLTLLDKTVLEHTVEHLLEHPLIEHVVVAVSADDPYFANLPL 66
Query: 127 EETKEKINVDLKFSLPGKERQDSVYSGLQEVDFN--SELVCIHDSARPLVLSKDVQKVLM 184
I VD GKER DSV S L+ V + SE V +HD+ARP V D+ +++
Sbjct: 67 AHHPRVIRVD-----GGKERADSVLSALEYVCQHRLSEWVLVHDAARPCVTHADITQLIT 121
Query: 185 DALR--VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
AL +GA +L P + T+K + +V T+DR LW TPQ+ + L++
Sbjct: 122 TALAHPIGA-ILASPVRDTMKRGDHLQQIVHTVDRTALWHALTPQMFRAQSLRERLFAAL 180
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSESS 294
++ + +TD+ S E + G N+K+T P+DL +AE L+ + E S
Sbjct: 181 QQQVTITDEASAFEWRGEKPALVAGRADNLKITQPEDLALAEFYLSRNKEKS 232
>UNIPROTKB|P96864 [details] [associations]
symbol:ispD "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:1773 "Mycobacterium tuberculosis"
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0002135 "CTP
binding" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0050518 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase activity" evidence=IDA] [GO:0051484
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway involved in terpenoid biosynthetic
process" evidence=IDA] HAMAP:MF_00108 InterPro:IPR001228
InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00056
GO:GO:0005886 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 EMBL:BX842583 GO:GO:0008270
GO:GO:0030145 HOGENOM:HOG000218563 GO:GO:0002135 GO:GO:0051484
GO:GO:0050518 TIGRFAMs:TIGR00453 eggNOG:COG1211 KO:K00991
OMA:IIGQPKD ProtClustDB:PRK00155 PIR:D70607 RefSeq:NP_218099.1
RefSeq:NP_338232.1 RefSeq:YP_006517072.1 PDB:2XWN PDB:3OKR PDB:3Q7U
PDB:3Q80 PDBsum:2XWN PDBsum:3OKR PDBsum:3Q7U PDBsum:3Q80
ProteinModelPortal:P96864 SMR:P96864 PRIDE:P96864
EnsemblBacteria:EBMYCT00000001248 EnsemblBacteria:EBMYCT00000070845
GeneID:13317191 GeneID:887787 GeneID:922806 KEGG:mtc:MT3688
KEGG:mtu:Rv3582c KEGG:mtv:RVBD_3582c PATRIC:18129865
TubercuList:Rv3582c EvolutionaryTrace:P96864 Uniprot:P96864
Length = 231
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 72/223 (32%), Positives = 112/223 (50%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+ A G G+R+ +PK + L GQ + + V + VVV P+ D +E +
Sbjct: 11 IVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPA--DRTDEAR 67
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSE--LVCIHDSARPLVLSKDVQKVLMDALR 188
+ + G R D+V L + +E V +HD+AR L V +V+ +ALR
Sbjct: 68 QILGHRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVV-EALR 126
Query: 189 VG-AAVLGV-PAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL--VNRE 244
G AAV+ V P TIK ++ V+ T +R L +QTPQ DLL + ++ ++
Sbjct: 127 DGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLP 186
Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
E TDD S+VEH+ V + +G K+TT DLL+A+ I+
Sbjct: 187 AAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229
>TIGR_CMR|SPO_2090 [details] [associations]
symbol:SPO_2090 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase/ 2C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008685
"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"
evidence=ISS] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_01520 InterPro:IPR001228 InterPro:IPR003526
InterPro:IPR018294 InterPro:IPR020555 Pfam:PF01128 Pfam:PF02542
PROSITE:PS01295 PROSITE:PS01350 UniPathway:UPA00056 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0016114 GO:GO:0019288
eggNOG:COG0245 HOGENOM:HOG000252034 KO:K12506 GO:GO:0008685
GO:GO:0050518 Gene3D:3.30.1330.50 InterPro:IPR026596
SUPFAM:SSF69765 TIGRFAMs:TIGR00151 RefSeq:YP_167320.1
ProteinModelPortal:Q5LRN5 GeneID:3193402 KEGG:sil:SPO2090
PATRIC:23377521 ProtClustDB:CLSK933757 Uniprot:Q5LRN5
Length = 377
Score = 216 (81.1 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 71/220 (32%), Positives = 106/220 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I++A GRG R G +PKQ+ PL G+ +A ++ F+ + ++ +V+V P D ++E
Sbjct: 6 IIVAAGRGTRAGGGVPKQWRPLAGRRVADWTLDRFA-LRQITHVVLVLHPEDHDAWDEFA 64
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLMDALRV 189
L + G +R SV +GL +D V IHD ARP V + + VL DAL
Sbjct: 65 ---TTPLILAPGGSDRAGSVRNGLAALDGLGITKVLIHDVARPCVSAATIGAVL-DALDA 120
Query: 190 --GAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE 247
GAA G+ + +E V T +R L+ QTPQ + D + + G
Sbjct: 121 HPGAAP-GLAVTDALW-TGAEGLVTGTRERDGLFAAQTPQGFRYDAIVAA-HAAHPGG-- 175
Query: 248 VTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
DDV + + V I G N+K+T +D AERIL
Sbjct: 176 AADDVEVARAAELTVAIVPGDPDNLKITRAEDFARAERIL 215
>TIGR_CMR|ECH_0157 [details] [associations]
symbol:ECH_0157 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] InterPro:IPR001228 Pfam:PF01128 EMBL:CP000236
GenomeReviews:CP000236_GR HOGENOM:HOG000218563 GO:GO:0008299
GO:GO:0050518 eggNOG:COG1211 KO:K00991 RefSeq:YP_506984.1
ProteinModelPortal:Q2GHU9 STRING:Q2GHU9 GeneID:3927220
KEGG:ech:ECH_0157 PATRIC:20575855 OMA:TINNMIS
ProtClustDB:CLSK749414 BioCyc:ECHA205920:GJNR-157-MONOMER
Uniprot:Q2GHU9
Length = 236
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 68/219 (31%), Positives = 107/219 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMV---EVKEIVVVCDPSYSDIFE 127
I+ AG + + +PKQY L G L S T + M+ ++ + VV + +++
Sbjct: 8 IVAAGNSNRFKWSAIPKQYCSL-GNHNILCS--TINNMISHPKINYVKVVIRKEHQHLYD 64
Query: 128 ETKEKINVD--LKFSLPGKERQDSVYSGLQEV-DFNSELVCIHDSARPLVLSKDVQKVLM 184
+KI D L + GK RQDSV GL+ + + N V IHD+ RP + K + +
Sbjct: 65 NCLQKIQNDKLLPPTYGGKRRQDSVRMGLESIQNINPYFVIIHDACRPFIDLK-ILDTME 123
Query: 185 DALRVGAAVLGVPAKA-TIKEANSESFVVRTLDRKTLWEMQTPQVIK-PDLLKKGFELVN 242
L A V+ V + TI + V++ +DR ++ +QTPQ K ++L N
Sbjct: 124 SILTHYAGVVPVLSITDTIHVVHENKTVIQNVDRNSIKLIQTPQAYKYSEILLHHRIAYN 183
Query: 243 RE-GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDL 280
E E D+ S++ H P+ TEG Y N K+TT +DL
Sbjct: 184 TEPNREFPDESSLMIHYNIPIMTTEGDYNNFKITTIEDL 222
>ZFIN|ZDB-GENE-061110-16 [details] [associations]
symbol:ispd "isoprenoid synthase domain containing"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0048747 "muscle fiber development" evidence=IMP] [GO:0048854
"brain morphogenesis" evidence=IMP] [GO:0035269 "protein O-linked
mannosylation" evidence=IMP] [GO:0060049 "regulation of protein
glycosylation" evidence=IGI;IMP] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128
PROSITE:PS01295 UniPathway:UPA00378 ZFIN:ZDB-GENE-061110-16
Gene3D:3.40.30.10 InterPro:IPR012336 GO:GO:0048747 GO:GO:0048854
GO:GO:0016779 GO:GO:0008299 GO:GO:0035269 GO:GO:0060049
eggNOG:COG1211 CTD:729920 GeneTree:ENSGT00390000006412
EMBL:BX470068 EMBL:FP102309 EMBL:BC127405 IPI:IPI00512554
IPI:IPI00992860 RefSeq:NP_001071270.1 UniGene:Dr.162124
STRING:A0JPF9 Ensembl:ENSDART00000003192 Ensembl:ENSDART00000140882
GeneID:798716 KEGG:dre:798716 HOGENOM:HOG000113111
HOVERGEN:HBG057782 InParanoid:A0JPF9 OrthoDB:EOG4JT05H
NextBio:20933528 ArrayExpress:A0JPF9 Bgee:A0JPF9 Uniprot:A0JPF9
Length = 462
Score = 212 (79.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 65/227 (28%), Positives = 109/227 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ + +P+ Y+ F R+ + +VVV D+
Sbjct: 72 VLPAGGSGERMGLTTPKQFCSIFNRPLISYTIQAFERLPWIVMVVVVVAKDNHDLMLNIV 131
Query: 131 EKIN-VDLKFSLPGKERQDSVYSGLQ----EVDFNS---ELVCIHDSARPLVLSKDVQKV 182
K N +K G R S+Y+GLQ D ++ ++V IHD+ RP V + K+
Sbjct: 132 RKFNHTKVKVVHGGTTRHRSIYNGLQAFSDSTDSSTPKPKVVIIHDAVRPFVEEDLLLKI 191
Query: 183 LMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
+ A GA+ P +T+ SES++ +L+R + PQ D++ + ++ +
Sbjct: 192 TLAAKEQGASGAIRPLVSTVIATTSESYLDHSLERAKYRASEMPQGFLYDIIFQAYQRCS 251
Query: 243 REGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
LE T+ + + +++ + EG T KVT DL AE I+
Sbjct: 252 EFDLEFGTECLHLALQYCGTNARLIEGPPTLWKVTYKRDLAAAEAII 298
>UNIPROTKB|F1NM25 [details] [associations]
symbol:F1NM25 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0035269 "protein O-linked mannosylation" evidence=IEA]
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
GO:GO:0003824 GO:GO:0008299 GO:GO:0035269
GeneTree:ENSGT00390000006412 OMA:CYNFVCV EMBL:AADN02000870
EMBL:AADN02000871 EMBL:AADN02000872 EMBL:AADN02000873
EMBL:AADN02000874 IPI:IPI00592251 Ensembl:ENSGALT00000017557
Uniprot:F1NM25
Length = 387
Score = 198 (74.8 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 62/229 (27%), Positives = 114/229 (49%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+R+G PKQ+ + G+P+ Y+ R+ + +I+VV P + +
Sbjct: 12 VLPAGGSGERLGGATPKQFCTVQGRPLVSYTVRAMERVSWISDIIVVVSPENIETMKSII 71
Query: 131 EKI-NVDLKFSLPGKERQDSVYSGLQ---EVDFNS------ELVCIHDSARPLVLSKDVQ 180
EK + + + G R S+++GL+ E +F++ E+V IHD+ RP V +
Sbjct: 72 EKYGHKRVTVAEGGITRHRSIFNGLKLFSENEFSNHLLQKPEVVIIHDAVRPFVEEDILL 131
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
KV+M A GAA P +T+ + ++ + +L+R + PQ D++ + ++
Sbjct: 132 KVVMAAKEHGAAGAIRPLVSTVIASAADGCLDHSLERAKYRASEMPQAFLFDIIYQAYQQ 191
Query: 241 VNREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
L+ T+ + + +++ K + EG+ KVT DL AE I+
Sbjct: 192 CTDYDLDYGTECLHLALKYCKTNAKLVEGTADLWKVTYKRDLYAAESII 240
>UNIPROTKB|A4D126 [details] [associations]
symbol:ISPD "Isoprenoid synthase domain-containing protein"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0035269 "protein O-linked
mannosylation" evidence=IMP] InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378 EMBL:CH471073
EMBL:CH236948 GO:GO:0016779 Orphanet:899 GO:GO:0008299
GO:GO:0035269 eggNOG:COG1211 CTD:729920 OMA:CYNFVCV
HOGENOM:HOG000113111 HOVERGEN:HBG057782 OrthoDB:EOG4JT05H
EMBL:AC004741 EMBL:AC006035 EMBL:AC073629 EMBL:AC079155
IPI:IPI00894461 RefSeq:NP_001094887.1 RefSeq:NP_001094896.1
UniGene:Hs.636502 ProteinModelPortal:A4D126 SMR:A4D126
STRING:A4D126 PhosphoSite:A4D126 PRIDE:A4D126
Ensembl:ENST00000399310 Ensembl:ENST00000407010 GeneID:729920
KEGG:hsa:729920 UCSC:uc010ktx.2 GeneCards:GC07M016098
HGNC:HGNC:37276 HPA:HPA043810 MIM:614631 MIM:614643
neXtProt:NX_A4D126 PharmGKB:PA165618128 InParanoid:A4D126
NextBio:131766 Bgee:A4D126 Genevestigator:A4D126 Uniprot:A4D126
Length = 451
Score = 199 (75.1 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 66/229 (28%), Positives = 112/229 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ P+L +P+ Y+ R+ +K+IVV ++ +
Sbjct: 50 VLPAGGCGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSII 109
Query: 131 EKINVDLKFSL--PGKERQDSVYSGLQ---EVDFNS-----ELVCIHDSARPLVLSKDVQ 180
+K + SL G R S+++GL+ E NS E+V IHD+ RP V +
Sbjct: 110 QKYQ-HKRISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLL 168
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
KV+ A GAA P +T+ +++ + +L+R + PQ D++ + ++
Sbjct: 169 KVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQ 228
Query: 241 VNREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + +++ + EGS KVT DL AE I+
Sbjct: 229 CSDYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESII 277
>TIGR_CMR|NSE_0178 [details] [associations]
symbol:NSE_0178 "putative 2-C-methyl-D-erythritol
4-phosphate cytidylyltransferase" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=ISS]
HAMAP:MF_00108 InterPro:IPR001228 Pfam:PF01128 PROSITE:PS01295
UniPathway:UPA00056 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000218563 GO:GO:0019288 GO:GO:0050518 eggNOG:COG1211
KO:K00991 RefSeq:YP_506073.1 ProteinModelPortal:Q2GEM3
STRING:Q2GEM3 GeneID:3932002 KEGG:nse:NSE_0178 PATRIC:22680455
OMA:REQQDFW ProtClustDB:CLSK2528037
BioCyc:NSEN222891:GHFU-209-MONOMER Uniprot:Q2GEM3
Length = 232
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 67/227 (29%), Positives = 107/227 (47%)
Query: 71 ILLAGGRGKRM-GANMPKQYLPLLGQPIALYSFYT-FSR-MVEVKEIVV--VCDPSYSDI 125
+++AGG G R+ + +PKQYL + G+ I Y+ F+ +E +VV C+ Y I
Sbjct: 7 LVVAGGGGSRITNSVLPKQYLQVRGKAILQYTVEALFAHPKIECVHLVVNSKCEVHYLPI 66
Query: 126 FEETKEKINVDLKFSLPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQKVLM 184
+ + S G R DSV+SGL+ ++ N V I D+ARP K + V+
Sbjct: 67 LRNLSGYV---VSLSEAGNTRTDSVFSGLKALECLNPSHVLIQDAARPFTTPKVINAVIK 123
Query: 185 DALRVGAAVLGV-PAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL-VN 242
L V+ V P + TI + E +V ++R L +QTPQ + ++
Sbjct: 124 SLLEGCEGVVPVVPVQDTIIKREPEG-IVTDVNRDELRIVQTPQGFDFCKIFAAYKAHFM 182
Query: 243 REGLEVTDDVSIVEHLKHPVYIT--EGSYTNIKVTTPDDLLIAERIL 287
TDD S+ L H + + G +N+K+T P DL A+ +L
Sbjct: 183 CPSKRYTDDGSLA--LAHGIKVECIPGDSSNLKITHPFDLKFADFLL 227
>TIGR_CMR|APH_1277 [details] [associations]
symbol:APH_1277 "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] InterPro:IPR001228 Pfam:PF01128 EMBL:CP000235
GenomeReviews:CP000235_GR HOGENOM:HOG000218563 GO:GO:0008299
GO:GO:0050518 eggNOG:COG1211 KO:K00991 ProtClustDB:CLSK749414
RefSeq:YP_505794.1 ProteinModelPortal:Q2GIK7 STRING:Q2GIK7
GeneID:3931114 KEGG:aph:APH_1277 PATRIC:20951344 OMA:VIMEEIA
BioCyc:APHA212042:GHPM-1280-MONOMER Uniprot:Q2GIK7
Length = 235
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 65/227 (28%), Positives = 111/227 (48%)
Query: 71 ILLAGGRGKRMG-ANMPKQYLPLLGQPIALYSFYTFSRMVE--VKEIVVVCDPSYSDIFE 127
+++A G +R+G N KQYL + + + T ++MV V + VV +E
Sbjct: 7 LIVAAGESRRLGNKNQLKQYLRIQRHSVLAH---TITQMVTSFVHSVKVVIGQGQDAFYE 63
Query: 128 ET----KEKINVDLKFS--LPGKERQDSVYSGLQEVD-FNSELVCIHDSARPLVLSKDVQ 180
+ +K+ DL G RQDSV GL+ ++ N E V IHD+ RP S
Sbjct: 64 HSLLSLPKKVT-DLLIPPVYGGARRQDSVRIGLESIEHINPEFVIIHDACRPFA-SLPSA 121
Query: 181 KVLMDALRVGAAVLGVPAKA-TIKEANSESFVVRTLDRKTLWEMQTPQVIK-PDLLKKGF 238
V+ LR A ++ V + TI + S ++ + + ++ +QTPQ+ + D+L+
Sbjct: 122 DVITYHLRDHAGIVPVLQPSDTISRVEN-SVIMEEIAKDSVRIVQTPQIYRYKDILRCHK 180
Query: 239 ELVNREGLEV-TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAE 284
E+ + + + +D+ S++ V TEG Y N K+TT +D+ AE
Sbjct: 181 EVYSTDPEKYFSDESSVMVACGMSVITTEGDYNNFKITTAEDVTRAE 227
>UNIPROTKB|F1SEJ2 [details] [associations]
symbol:LOC100623666 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
GO:GO:0003824 GO:GO:0008299 GeneTree:ENSGT00390000006412
EMBL:FP102811 EMBL:FP090911 Ensembl:ENSSSCT00000016733 OMA:TDACKIL
Uniprot:F1SEJ2
Length = 286
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 65/229 (28%), Positives = 108/229 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ P+L +P+ Y+ R+ +K+IVV + +
Sbjct: 50 VLPAGGSGERMGVPTPKQFCPILERPLISYTLQALERVCWIKDIVVAVTGENMEAMKGII 109
Query: 131 EKINVDLKFSL--PGKERQDSVYSGLQ---EVDFNS-----ELVCIHDSARPLVLSKDVQ 180
++ + SL G R S+++GL+ E NS E+V IHD+ RP V +
Sbjct: 110 QRYQ-HKRISLVEAGVTRHRSIFNGLKALAEDQPNSRLSKPEVVIIHDAVRPFVEEDVLF 168
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+V+ A GA+ P +T+ ++E + +L+R + PQ D++ + +
Sbjct: 169 QVVTAAKEYGASGAIRPLVSTVISPSTEGCLDYSLERARHRASEMPQAFLFDVIYEAYRQ 228
Query: 241 VNREGLEV-TDDVSIVEHLKH-PVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + H + EGS KVT DL AE I+
Sbjct: 229 CSDHDLEFGTECLHLALKYCHIKAKLVEGSPDLWKVTYKRDLYAAESII 277
>UNIPROTKB|E1BCH6 [details] [associations]
symbol:ISPD "Isoprenoid synthase domain-containing protein"
species:9913 "Bos taurus" [GO:0035269 "protein O-linked
mannosylation" evidence=ISS] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378 GO:GO:0016779
GO:GO:0008299 GO:GO:0035269 EMBL:DAAA02010006 EMBL:DAAA02010007
EMBL:DAAA02010008 EMBL:DAAA02010009 EMBL:DAAA02010010
EMBL:DAAA02010011 EMBL:DAAA02010012 EMBL:DAAA02010013
EMBL:DAAA02010014 EMBL:DAAA02010015 EMBL:DAAA02010016
EMBL:DAAA02010017 EMBL:DAAA02010018 EMBL:DAAA02010019
EMBL:DAAA02010020 EMBL:DAAA02010021 EMBL:DAAA02010022
EMBL:DAAA02010023 IPI:IPI00713148 RefSeq:XP_002686725.1
ProteinModelPortal:E1BCH6 Ensembl:ENSBTAT00000020061
GeneID:100337328 KEGG:bta:100337328 CTD:729920
GeneTree:ENSGT00390000006412 OMA:CYNFVCV Uniprot:E1BCH6
Length = 445
Score = 188 (71.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 62/229 (27%), Positives = 108/229 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ P+L +P+ Y+ R+ +K+I+V + +
Sbjct: 50 VLPAGGSGERMGVPTPKQFCPILERPLISYTLQALERVSWIKDIIVAVTRENMETMKGII 109
Query: 131 EKINVDLKFSL--PGKERQDSVYSGLQEVDFNS--------ELVCIHDSARPLVLSKDVQ 180
++ + SL G R S+++GL+ + + E+V IHD+ RP V +
Sbjct: 110 QRYQ-HKRISLVEAGVTRHRSIFNGLKALAEDQPNCRLSKPEVVIIHDAVRPFVEEDVLL 168
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
KV+ A GA+ P +T+ +++S + +L+R + PQ D++ ++
Sbjct: 169 KVVTAAQEHGASGAIRPLVSTVISPSADSCLDHSLERARYRASEMPQAFLFDVIYDAYQQ 228
Query: 241 VNREGLEV-TDDVSIVEHLKH-PVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + H + EGS KVT DL AE I+
Sbjct: 229 CSDYDLEFGTECLHLALKYSHIKAKLVEGSPDLWKVTYKRDLYAAESII 277
>UNIPROTKB|J9NYK6 [details] [associations]
symbol:ISPD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
GO:GO:0003824 GO:GO:0008299 CTD:729920 GeneTree:ENSGT00390000006412
OMA:CYNFVCV EMBL:AAEX03009349 EMBL:AAEX03009348
RefSeq:XP_003431914.1 Ensembl:ENSCAFT00000046360 GeneID:100687645
KEGG:cfa:100687645 Uniprot:J9NYK6
Length = 430
Score = 187 (70.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 64/229 (27%), Positives = 107/229 (46%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ P+L +P+ Y+ + +K+IVV + +
Sbjct: 30 VLPAGGSGERMGVPTPKQFCPVLERPLISYTLQALESVCWIKDIVVAVTGENMEAMKGII 89
Query: 131 EKINVDLKFSL--PGKERQDSVYSGLQEVDFNS--------ELVCIHDSARPLVLSKDVQ 180
+K + SL G R S+++GL+ + + E+V IHD+ RP V +
Sbjct: 90 QKYQHQ-RISLVAAGVTRHRSIFNGLKALAEDQPDSKLSKPEVVIIHDAVRPFVEEDVLL 148
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
KV+ A GAA P +T+ +++ + +LDR + PQ D++ + ++
Sbjct: 149 KVVTAAKEHGAAGAIRPLVSTVISPSADGCLDHSLDRARHRASEMPQAFLFDVIYEAYQQ 208
Query: 241 VNREGLEV-TDDVSIVEHLKHP-VYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + H + EGS KVT DL AE I+
Sbjct: 209 CSDYDLEFGTECLQLALKYGHVHAKLVEGSPDLWKVTYKRDLYAAESII 257
>UNIPROTKB|Q28CZ7 [details] [associations]
symbol:ispd "Isoprenoid synthase domain-containing protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0035269 "protein
O-linked mannosylation" evidence=ISS] InterPro:IPR001228
InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378
GO:GO:0016779 GO:GO:0008299 GO:GO:0035269 CTD:729920
GeneTree:ENSGT00390000006412 OMA:CYNFVCV HOGENOM:HOG000113111
HOVERGEN:HBG057782 OrthoDB:EOG4JT05H EMBL:CR855789 EMBL:CR926258
EMBL:AAMC01021497 EMBL:AAMC01021498 EMBL:AAMC01021499
EMBL:AAMC01021500 EMBL:AAMC01021501 EMBL:AAMC01021502
EMBL:AAMC01021503 EMBL:BC171103 RefSeq:NP_001016240.1
UniGene:Str.27457 ProteinModelPortal:Q28CZ7 STRING:Q28CZ7
Ensembl:ENSXETT00000049329 Ensembl:ENSXETT00000049330 GeneID:548994
KEGG:xtr:548994 Xenbase:XB-GENE-1014860 Uniprot:Q28CZ7
Length = 411
Score = 185 (70.2 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 62/232 (26%), Positives = 111/232 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+R+G+ PKQ+ +LG+P+ ++ F R +K+I+VV D+ +
Sbjct: 14 VLPAGGCGERLGSLTPKQFCTVLGRPLISHTLEAFERASWIKDIIVVVASESLDLMKAII 73
Query: 131 EKINVDLKFSLPGKE-RQDSVYSGLQEVDFNS---------ELVCIHDSARPLVLSKDVQ 180
K + G E R S+++GL+ N E+V IHD+ RP V +
Sbjct: 74 HKYGHQRVTLVKGGETRHRSIFNGLKVFSENHSDDTAIDKPEVVIIHDAVRPFVDEDFLL 133
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+V A + GAA P +T+ ++S+ F+ +L+R + PQ + D++ + +
Sbjct: 134 QVAKSAKQHGAAGAIRPLVSTVIASSSDGFLDYSLERARHRASEMPQAFQYDVIYRAYLQ 193
Query: 241 VNREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
L+ T+ + + +++ + EG KVT DL AE ++ S
Sbjct: 194 CTDYDLDFGTECLHLALQYSNVKAKLLEGPPDLWKVTYKRDLYAAESVIKES 245
>RGD|1359368 [details] [associations]
symbol:Ispd "isoprenoid synthase domain containing"
species:10116 "Rattus norvegicus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0035269 "protein O-linked mannosylation"
evidence=ISO;ISS] InterPro:IPR001228 InterPro:IPR018294
Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378 RGD:1359368
GO:GO:0016779 GO:GO:0008299 GO:GO:0035269 eggNOG:COG1211 CTD:729920
GeneTree:ENSGT00390000006412 OMA:CYNFVCV HOVERGEN:HBG057782
OrthoDB:EOG4JT05H HSSP:Q9X1B3 EMBL:AY769991 EMBL:AY769992
IPI:IPI00214892 IPI:IPI00900490 RefSeq:NP_001008387.1
UniGene:Rn.119606 ProteinModelPortal:Q5S6T3 STRING:Q5S6T3
PRIDE:Q5S6T3 Ensembl:ENSRNOT00000008312 GeneID:493574
KEGG:rno:493574 UCSC:RGD:1359368 InParanoid:Q5S6T4 NextBio:697220
ArrayExpress:Q5S6T3 Genevestigator:Q5S6T3 Uniprot:Q5S6T3
Length = 447
Score = 184 (69.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/228 (25%), Positives = 109/228 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ +L +P+ Y+ R+ +K+IVV +
Sbjct: 48 VLPAGGCGERMGVRTPKQFCRVLERPLISYTLQAMERVCWIKDIVVTVTGENMEAMRSII 107
Query: 131 EKI-NVDLKFSLPGKERQDSVYSGLQEVDFNS--------ELVCIHDSARPLVLSKDVQK 181
++ + + + G R S+++GL+ + + E+V IHD+ RP V + +
Sbjct: 108 QRYGHKRISLAEAGATRHRSIFNGLKALAEDQPGCELTRPEVVIIHDAVRPFVEEDILLR 167
Query: 182 VLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 241
V++ A GAA P +T+ +++ + +LDR + PQ D++ + ++
Sbjct: 168 VVLAAKEHGAAGAIRPLVSTVVSPSADGHLDHSLDRAKHRASEMPQAFHFDVIYEAYQKC 227
Query: 242 NREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + +++ + EG+ KVT DL AE ++
Sbjct: 228 SDFDLEFGTECLQLALKYCHRKAKLVEGTPDLWKVTYKQDLCAAEAMI 275
>UNIPROTKB|Q5S6T3 [details] [associations]
symbol:Ispd "Isoprenoid synthase domain-containing protein"
species:10116 "Rattus norvegicus" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] InterPro:IPR001228
InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378
RGD:1359368 GO:GO:0016779 GO:GO:0008299 GO:GO:0035269
eggNOG:COG1211 CTD:729920 GeneTree:ENSGT00390000006412 OMA:CYNFVCV
HOVERGEN:HBG057782 OrthoDB:EOG4JT05H HSSP:Q9X1B3 EMBL:AY769991
EMBL:AY769992 IPI:IPI00214892 IPI:IPI00900490 RefSeq:NP_001008387.1
UniGene:Rn.119606 ProteinModelPortal:Q5S6T3 STRING:Q5S6T3
PRIDE:Q5S6T3 Ensembl:ENSRNOT00000008312 GeneID:493574
KEGG:rno:493574 UCSC:RGD:1359368 InParanoid:Q5S6T4 NextBio:697220
ArrayExpress:Q5S6T3 Genevestigator:Q5S6T3 Uniprot:Q5S6T3
Length = 447
Score = 184 (69.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/228 (25%), Positives = 109/228 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ +L +P+ Y+ R+ +K+IVV +
Sbjct: 48 VLPAGGCGERMGVRTPKQFCRVLERPLISYTLQAMERVCWIKDIVVTVTGENMEAMRSII 107
Query: 131 EKI-NVDLKFSLPGKERQDSVYSGLQEVDFNS--------ELVCIHDSARPLVLSKDVQK 181
++ + + + G R S+++GL+ + + E+V IHD+ RP V + +
Sbjct: 108 QRYGHKRISLAEAGATRHRSIFNGLKALAEDQPGCELTRPEVVIIHDAVRPFVEEDILLR 167
Query: 182 VLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 241
V++ A GAA P +T+ +++ + +LDR + PQ D++ + ++
Sbjct: 168 VVLAAKEHGAAGAIRPLVSTVVSPSADGHLDHSLDRAKHRASEMPQAFHFDVIYEAYQKC 227
Query: 242 NREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + +++ + EG+ KVT DL AE ++
Sbjct: 228 SDFDLEFGTECLQLALKYCHRKAKLVEGTPDLWKVTYKQDLCAAEAMI 275
>MGI|MGI:1923097 [details] [associations]
symbol:Ispd "isoprenoid synthase domain containing"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0035269
"protein O-linked mannosylation" evidence=ISO] InterPro:IPR001228
InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295 UniPathway:UPA00378
MGI:MGI:1923097 GO:GO:0016779 GO:GO:0008299 GO:GO:0035269
eggNOG:COG1211 CTD:729920 GeneTree:ENSGT00390000006412 OMA:CYNFVCV
HOVERGEN:HBG057782 OrthoDB:EOG4JT05H EMBL:AK039004 EMBL:AK043122
EMBL:AK045940 EMBL:BC024061 EMBL:BC086665 EMBL:BC096030
EMBL:BC118038 IPI:IPI00319767 IPI:IPI00900429 IPI:IPI00900434
IPI:IPI00900443 IPI:IPI00900452 RefSeq:NP_848744.2
UniGene:Mm.261764 HSSP:Q9X1B3 ProteinModelPortal:Q5RJG7 SMR:Q5RJG7
STRING:Q5RJG7 PhosphoSite:Q5RJG7 PaxDb:Q5RJG7 PRIDE:Q5RJG7
Ensembl:ENSMUST00000062041 GeneID:75847 KEGG:mmu:75847
UCSC:uc007njy.2 UCSC:uc007njz.2 UCSC:uc007nkb.2 UCSC:uc007nkd.1
InParanoid:Q5RJG7 NextBio:344100 Bgee:Q5RJG7 Genevestigator:Q5RJG7
Uniprot:Q5RJG7
Length = 447
Score = 181 (68.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 57/228 (25%), Positives = 108/228 (47%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
+L AGG G+RMG PKQ+ +L +P+ Y+ R+ +K+IVV +
Sbjct: 48 VLPAGGCGERMGVRTPKQFCRVLERPLISYTLQAMERVCWIKDIVVTVTGENMEAMRSII 107
Query: 131 EKI-NVDLKFSLPGKERQDSVYSGLQEVDFNS--------ELVCIHDSARPLVLSKDVQK 181
++ + + + G R S+++GL+ + + E+V IHD+ RP V + +
Sbjct: 108 QRYGHKRISLAEAGATRHRSIFNGLKALAEDQPDCKLTKPEVVIIHDAVRPFVEEDILLR 167
Query: 182 VLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 241
V++ A GAA P +T+ +++ + +LDR + PQ D++ + ++
Sbjct: 168 VVLAAKEHGAAGAIRPLVSTVISPSADGHLDHSLDRAKHRASEMPQAFLFDVIYEAYQQC 227
Query: 242 NREGLEV-TDDVSI-VEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ LE T+ + + +++ + EG KVT DL AE ++
Sbjct: 228 SDFDLEFGTECLQLALKYCHRKAKLVEGPPALWKVTYKQDLCAAEAMI 275
>GENEDB_PFALCIPARUM|PFA0340w [details] [associations]
symbol:PFA0340w "2-C-methyl-D-erythritol
4-phosphate cytidylyltransferase, putative" species:5833
"Plasmodium falciparum" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
EMBL:AL844501 GO:GO:0008299 GO:GO:0050518 RefSeq:XP_001351000.1
HSSP:Q46893 ProteinModelPortal:Q8I273 EnsemblProtists:PFA0340w:mRNA
GeneID:813205 KEGG:pfa:PFA_0340w HOGENOM:HOG000212612
ProtClustDB:CLSZ2500524 Uniprot:Q8I273
Length = 734
Score = 103 (41.3 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
ILL GG GKR PKQ+L L P+ +YSF F + +K + +VCD + F
Sbjct: 199 ILLCGGIGKRTELIGPKQFLKLNDIPLFIYSFNLFIKCNLIKSLTLVCDKKH---FSCII 255
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFN 160
INV + L K + +G +++ N
Sbjct: 256 HSINVYNQLLLKRKMINSFLKNGNDKLNIN 285
Score = 88 (36.0 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 164 VCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK-----EANSES----FVVRT 214
+ IHD ARP + D ++ + +LG A TIK E N + F+ +T
Sbjct: 512 ILIHDGARPFLSEIDFFNLIYYSTLDKNVILGSKATDTIKLIQHEEENKKKTTSPFIKKT 571
Query: 215 LDRKTLWEMQTPQV 228
+DR T+++ QTPQ+
Sbjct: 572 IDRDTIFQAQTPQI 585
Score = 64 (27.6 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 247 EVTDDVSIVEHL----KHPVYITEGSYTNIKVTTPDDLL 281
+ TD S+ ++ K +++ + ++ N KVTTP+D+L
Sbjct: 632 QFTDTSSLYQYFNKSKKKKIFVLQSNFPNFKVTTPEDVL 670
Score = 47 (21.6 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 128 ETKEK-INVD----LKFSLPGKERQDSVYSGLQEVD 158
+ K+K INV+ LK GKER DS + ++ +D
Sbjct: 406 QIKQKHINVNRYKLLKIVESGKERLDSFLNAMKSID 441
>UNIPROTKB|Q8I273 [details] [associations]
symbol:PFA_0340w "2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase, putative" species:36329 "Plasmodium
falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR001228 InterPro:IPR018294 Pfam:PF01128 PROSITE:PS01295
EMBL:AL844501 GO:GO:0008299 GO:GO:0050518 RefSeq:XP_001351000.1
HSSP:Q46893 ProteinModelPortal:Q8I273 EnsemblProtists:PFA0340w:mRNA
GeneID:813205 KEGG:pfa:PFA_0340w HOGENOM:HOG000212612
ProtClustDB:CLSZ2500524 Uniprot:Q8I273
Length = 734
Score = 103 (41.3 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
ILL GG GKR PKQ+L L P+ +YSF F + +K + +VCD + F
Sbjct: 199 ILLCGGIGKRTELIGPKQFLKLNDIPLFIYSFNLFIKCNLIKSLTLVCDKKH---FSCII 255
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFN 160
INV + L K + +G +++ N
Sbjct: 256 HSINVYNQLLLKRKMINSFLKNGNDKLNIN 285
Score = 88 (36.0 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 164 VCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIK-----EANSES----FVVRT 214
+ IHD ARP + D ++ + +LG A TIK E N + F+ +T
Sbjct: 512 ILIHDGARPFLSEIDFFNLIYYSTLDKNVILGSKATDTIKLIQHEEENKKKTTSPFIKKT 571
Query: 215 LDRKTLWEMQTPQV 228
+DR T+++ QTPQ+
Sbjct: 572 IDRDTIFQAQTPQI 585
Score = 64 (27.6 bits), Expect = 6.6e-10, Sum P(3) = 6.6e-10
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 247 EVTDDVSIVEHL----KHPVYITEGSYTNIKVTTPDDLL 281
+ TD S+ ++ K +++ + ++ N KVTTP+D+L
Sbjct: 632 QFTDTSSLYQYFNKSKKKKIFVLQSNFPNFKVTTPEDVL 670
Score = 47 (21.6 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 128 ETKEK-INVD----LKFSLPGKERQDSVYSGLQEVD 158
+ K+K INV+ LK GKER DS + ++ +D
Sbjct: 406 QIKQKHINVNRYKLLKIVESGKERLDSFLNAMKSID 441
>TIGR_CMR|CJE_1779 [details] [associations]
symbol:CJE_1779 "ispD/ispF bifunctional enzyme"
species:195099 "Campylobacter jejuni RM1221" [GO:0008685
"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"
evidence=ISS] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=ISS] [GO:0050518
"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity"
evidence=ISS] HAMAP:MF_01520 InterPro:IPR001228 InterPro:IPR003526
InterPro:IPR018294 InterPro:IPR020555 Pfam:PF01128 Pfam:PF02542
PROSITE:PS01295 PROSITE:PS01350 UniPathway:UPA00056 GO:GO:0046872
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0016114 GO:GO:0019288
RefSeq:YP_179751.1 ProteinModelPortal:Q5HSI4 SMR:Q5HSI4
STRING:Q5HSI4 GeneID:3232406 KEGG:cjr:CJE1779 PATRIC:20045368
eggNOG:COG0245 HOGENOM:HOG000252034 KO:K12506 OMA:DGDIGSH
ProtClustDB:PRK09382 BioCyc:CJEJ195099:GJC0-1809-MONOMER
GO:GO:0008685 GO:GO:0050518 Gene3D:3.30.1330.50 InterPro:IPR026596
SUPFAM:SSF69765 TIGRFAMs:TIGR00453 TIGRFAMs:TIGR00151
Uniprot:Q5HSI4
Length = 371
Score = 148 (57.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 54/169 (31%), Positives = 82/169 (48%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+LA G R + KQ+L L P+ LY+ S K+IVV S+I
Sbjct: 7 IMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTS----SNI--TYM 60
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
+K + +F G R +S+ L+ +D SE V + D AR LV SK++ L++ L
Sbjct: 61 KKFTKNYEFIEGGDTRAESLKKALELID--SEFVMVSDVARVLV-SKNLFDRLIENLDKA 117
Query: 191 AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFE 239
+ PA +K A++ F L R+ + +QTPQ+ K LLKK +
Sbjct: 118 DCI--TPA---LKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKALD 161
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 131 EKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVG 190
+K + +F G R +S+ L+ +D SE V + D AR LV SK++ L++ L
Sbjct: 61 KKFTKNYEFIEGGDTRAESLKKALELID--SEFVMVSDVARVLV-SKNLFDRLIENLDKA 117
Query: 191 AAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTD 250
+ PA +K A++ F L R+ + +QTPQ+ K LLKK + + LE TD
Sbjct: 118 DCI--TPA---LKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKALD----QNLEFTD 168
Query: 251 DVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSES 293
D + + + ++ EG K+T +DL + LNL + S
Sbjct: 169 DSTAIAAMGGKIWFVEGEENARKLTFKEDL----KKLNLPTPS 207
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 294 261 0.00090 114 3 11 22 0.47 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 595 (63 KB)
Total size of DFA: 177 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.00u 0.08s 23.08t Elapsed: 00:00:01
Total cpu time: 23.01u 0.08s 23.09t Elapsed: 00:00:01
Start: Fri May 10 10:23:23 2013 End: Fri May 10 10:23:24 2013