BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022657
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P69834|ISPD_ARATH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Arabidopsis thaliana GN=ISPD PE=1 SV=1
Length = 302
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/300 (68%), Positives = 241/300 (80%), Gaps = 13/300 (4%)
Query: 1 MGLLQLNLALSSSTS----SLSLFPDNHQTFSRTGHKNQFFGLTRRARLATSR------I 50
M +LQ NL +S + L + +++ FS Q ++R + R I
Sbjct: 1 MAMLQTNLGFITSPTFLCPKLKVKLNSYLWFSYRSQV-QKLDFSKRVNRSYKRDALLLSI 59
Query: 51 RCSAKV--DNGSVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRM 108
+CS+ DN +VVVK+KSVSVILLAGG+GKRM +MPKQY+PLLGQPIALYSF+TFSRM
Sbjct: 60 KCSSSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSFFTFSRM 119
Query: 109 VEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHD 168
EVKEIVVVCDP + DIFEE +E I+VDL+F++PGKERQDSVYSGLQE+D NSELVCIHD
Sbjct: 120 PEVKEIVVVCDPFFRDIFEEYEESIDVDLRFAIPGKERQDSVYSGLQEIDVNSELVCIHD 179
Query: 169 SARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQV 228
SARPLV ++DV+KVL D VGAAVLGVPAKATIKE NS+S VV+TLDRKTLWEMQTPQV
Sbjct: 180 SARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKTLDRKTLWEMQTPQV 239
Query: 229 IKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
IKP+LLKKGFELV EGLEVTDDVSIVE+LKHPVY+++GSYTNIKVTTPDDLL+AERIL+
Sbjct: 240 IKPELLKKGFELVKSEGLEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 299
>sp|Q5N8G1|ISPD_ORYSJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD
PE=2 SV=1
Length = 297
Score = 353 bits (906), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 179/249 (71%), Positives = 213/249 (85%), Gaps = 2/249 (0%)
Query: 41 RRARLATSRIRCSAKVDNG-SVVVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIAL 99
R AR S + C+AK D VK++SVSV+LL+GG+GKRMGA+MPKQYLPLLG PIAL
Sbjct: 48 RHARKWGSAV-CAAKADGAQGEAVKERSVSVVLLSGGQGKRMGASMPKQYLPLLGLPIAL 106
Query: 100 YSFYTFSRMVEVKEIVVVCDPSYSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDF 159
+S TF ++ EVKE+VVVCDP Y DIFE + E + + +KF+LPGKERQDSVY+GLQE+D
Sbjct: 107 HSLKTFCQLKEVKEVVVVCDPDYKDIFEGSIENVQIPIKFALPGKERQDSVYNGLQEIDG 166
Query: 160 NSELVCIHDSARPLVLSKDVQKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKT 219
+SELVC+HDSARPLV S+DV+KVL DA+ GAAVLGVP KATIKEA+S SFVV+TLDRKT
Sbjct: 167 DSELVCVHDSARPLVSSEDVKKVLEDAIVHGAAVLGVPVKATIKEADSNSFVVKTLDRKT 226
Query: 220 LWEMQTPQVIKPDLLKKGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDD 279
LWEMQTPQV++P LL+ GFELV R+GLEVTDDVSIVE+LKH VYITEGSYTNIKVTTPDD
Sbjct: 227 LWEMQTPQVMRPSLLRDGFELVKRDGLEVTDDVSIVEYLKHSVYITEGSYTNIKVTTPDD 286
Query: 280 LLIAERILN 288
LL+AER++N
Sbjct: 287 LLLAERLMN 295
>sp|Q6MEE8|ISPD_PARUW 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Protochlamydia amoebophila (strain UWE25) GN=ispD
PE=3 SV=1
Length = 230
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
+V+LLAGG G RM +PKQYL + +PIAL+SF + M E+++++VVC+P Y +F
Sbjct: 9 TVVLLAGGMGTRMKNLIPKQYLTIQEKPIALHSFEKLASMPEIEQMIVVCEPQYEQLF-- 66
Query: 129 TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
T K+N L F+ PG RQDS+++G++ + N LVCIHDSARP + +++ + +A +
Sbjct: 67 TVYKLNKPLIFARPGLRRQDSLWNGIKLIAGNP-LVCIHDSARPFIEIDRIRQTVAEAEK 125
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
GAAVLGV KATIK + F+V T +R LWEMQTPQ+++ LL GF + + L V
Sbjct: 126 WGAAVLGVRVKATIKICEEKQFIVNTPNRAFLWEMQTPQIVRLKLLYDGFSVAQKNELTV 185
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+DDVS+VE + PV + EGSY NIK+TTP+DLLIA+ IL
Sbjct: 186 SDDVSLVELIDKPVKVVEGSYLNIKITTPEDLLIAQSIL 224
>sp|Q9Z7X5|ISPD_CHLPN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia pneumoniae GN=ispD PE=3 SV=1
Length = 211
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 133/219 (60%), Gaps = 12/219 (5%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
S+ILL+GG+G R G+ +PKQYLPL G P+ L+S S + ++ E++VVCDPSY + F+E
Sbjct: 5 SLILLSGGQGTRFGSKIPKQYLPLNGTPLVLHSLKILSSLPQIAEVIVVCDPSYQETFQE 64
Query: 129 TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
+ F++PG+ RQDSV+SGLQ+V + V IHD ARP + ++ +L A +
Sbjct: 65 ------YPVSFAIPGERRQDSVFSGLQQVSY--PWVIIHDGARPFIYPDEIHDLLETAEK 116
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
+GA L P TIK+ N VRTLDR L + TPQ IK ++L++G L + L +
Sbjct: 117 IGATALASPIPYTIKQRNP----VRTLDRDNLAIIHTPQCIKTEILREGLALAKEKQLTL 172
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
DD+ E + P + + IK++ P+DL IA+ +L
Sbjct: 173 VDDIEAAEIIGKPSQLVFNKHPQIKISYPEDLTIAQALL 211
>sp|Q824I4|ISPD_CHLCV 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila caviae (strain GPIC) GN=ispD PE=3 SV=2
Length = 212
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 131/223 (58%), Gaps = 12/223 (5%)
Query: 65 DKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSD 124
D S+ILL+GG+G+R GAN PKQYLP G+P+ L++ T + E+ E++VVCD SY
Sbjct: 2 DPKCSLILLSGGKGERFGANQPKQYLPFQGEPLILHALKTALHIPEITEVIVVCDVSYRH 61
Query: 125 IFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
IFE +KF+ GK RQDSV+SGLQ V ++ V IHD RP + +V +++
Sbjct: 62 IFE------GFPVKFAESGKRRQDSVFSGLQHV--SNPWVLIHDGVRPFIYPDEVTELIA 113
Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
A + GAA L TIK+ + V+TLDR L + TPQ +K ++L G E +RE
Sbjct: 114 VAQQTGAATLVSNVPYTIKQRHP----VKTLDRDALSIVHTPQCVKTEILSAGLEFASRE 169
Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
G+ + DD E L PV + + IK+T P+DL IA +L
Sbjct: 170 GITLVDDTQAAELLDIPVSLVSSKHPQIKITYPEDLTIAHALL 212
>sp|Q5L433|ISPD_GEOKA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus kaustophilus (strain HTA426) GN=ispD PE=3
SV=1
Length = 228
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 4/219 (1%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+LA GRGKRM A M KQ+L L G+P+ + + F R IV+V +P+ FE+
Sbjct: 6 IVLAAGRGKRMNAGMNKQFLELGGEPLIVRTLNVFERDERCTRIVLVVNPAERSRFEQLL 65
Query: 131 EKINVDLKFSLP--GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
+ + +L G+ERQ SVY+GLQ + E+V IHD ARP V + +++ A++
Sbjct: 66 ARFRIQKVAALTDGGEERQHSVYNGLQALA-GEEIVLIHDGARPFVRVHHLHELVNAAVQ 124
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
GAA+ V K TIK+AN FV +T+DR +LW +QTPQ + L+ + E + G
Sbjct: 125 YGAAIPAVRVKDTIKKANG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEAAKQAGYLG 183
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
TDD S+VE + PV I EG Y NIK+TTP+DLL AE IL
Sbjct: 184 TDDASLVERIGKPVKIIEGDYRNIKLTTPEDLLFAEAIL 222
>sp|Q253C1|ISPD_CHLFF 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila felis (strain Fe/C-56) GN=ispD PE=3
SV=1
Length = 212
Score = 167 bits (423), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 131/223 (58%), Gaps = 12/223 (5%)
Query: 65 DKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSD 124
+ S+ILL+GG+G+R GAN PKQYLP GQP+ L++ + + E+ EI+VVCD SY
Sbjct: 2 NPKCSLILLSGGKGERFGANQPKQYLPFQGQPLILHALNSALLIPEINEIIVVCDASYEH 61
Query: 125 IFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
IFE +KF+ G RQDSV+SGL V + V +HD RP + +V ++++
Sbjct: 62 IFE------GYSVKFAPAGMRRQDSVFSGLHHV--TNPWVLVHDGVRPFIYPDEVSELIV 113
Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
A + GAA L TIK+ N V+TLDR +L + TPQ IK ++L +G EL +RE
Sbjct: 114 IAQQTGAATLVSNVPYTIKQRNP----VKTLDRDSLSIVHTPQCIKTEILLEGLELADRE 169
Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ + DD E L PV + + IK+T P+DL IA +L
Sbjct: 170 QITLVDDTQAAELLGIPVSLVSNKHPQIKITYPEDLTIAHALL 212
>sp|Q5L6V2|ISPD_CHLAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydophila abortus (strain S26/3) GN=ispD PE=3
SV=1
Length = 217
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 12/226 (5%)
Query: 62 VVKDKSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS 121
V D S+ILL+GG+G+R GAN PKQYLP G+P+ L++ R+ E+ EI+VVCD +
Sbjct: 4 VSMDPKCSLILLSGGKGERFGANQPKQYLPFRGEPLILHALNMALRIPEISEIIVVCDVN 63
Query: 122 YSDIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQK 181
Y IFE +KF+ PG RQDSV+SGLQ+V + V +HD RP + +V +
Sbjct: 64 YESIFE------GYPVKFARPGTRRQDSVFSGLQQV--ANPWVLVHDGVRPFIYPDEVTE 115
Query: 182 VLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 241
++ A + GAA L TIK+ + V+TLDR L + TPQ IK +L +G E
Sbjct: 116 LVTAAYQTGAATLVSNVPYTIKQRDP----VKTLDRDALSIVHTPQCIKTQILLEGLERA 171
Query: 242 NREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
N+E + + DD E L PV + + IKVT P+DL +A +L
Sbjct: 172 NQERITLVDDTQAAELLNLPVALVFNKHPQIKVTYPEDLTLAHALL 217
>sp|Q0SQB9|ISPD_CLOPS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain SM101 / Type A)
GN=ispD PE=3 SV=1
Length = 225
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 134/225 (59%), Gaps = 6/225 (2%)
Query: 66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI 125
K VSVIL AGG+GKRMGA + KQ++ + G+PI Y+ F ++ EI++V D
Sbjct: 3 KVVSVIL-AGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKDIDEIILVLPKDEIDY 61
Query: 126 FEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV 182
F+ E D K S GKERQDSVY+ L + + ++V IHD AR V +K ++
Sbjct: 62 FKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDG 119
Query: 183 LMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
+ + GAA GV K TIK N E F V T +R +L +QTPQ K +L+KKG V
Sbjct: 120 IKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVK 179
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
E ++VTDD IVE L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 180 NEKIQVTDDTMIVELLGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|Q8XHQ3|ISPD_CLOPE 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain 13 / Type A) GN=ispD
PE=3 SV=1
Length = 225
Score = 164 bits (414), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 133/225 (59%), Gaps = 6/225 (2%)
Query: 66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI 125
K VSVIL AGG+GKRMGA + KQ++ + G+PI Y+ F + EI++V D
Sbjct: 3 KVVSVIL-AGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDY 61
Query: 126 FEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV 182
F+ E D K S GKERQDSVY+ L + + ++V IHD AR V +K ++
Sbjct: 62 FKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDG 119
Query: 183 LMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
+ + GAA GV K TIK N E F V T +R +L +QTPQ K +L+KKG V
Sbjct: 120 IKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVK 179
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
E ++VTDD IVE L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 180 NEKIQVTDDTMIVELLGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|Q0TMM2|ISPD_CLOP1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=ispD PE=3 SV=1
Length = 225
Score = 164 bits (414), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 133/225 (59%), Gaps = 6/225 (2%)
Query: 66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDI 125
K VSVIL AGG+GKRMGA + KQ++ + G+PI Y+ F + EI++V D
Sbjct: 3 KVVSVIL-AGGKGKRMGAEVSKQFIEINGKPIIYYTLKAFEECKGIDEIILVLPKDEIDY 61
Query: 126 FEETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKV 182
F+ E D K S GKERQDSVY+ L + + ++V IHD AR V +K ++
Sbjct: 62 FKREIEP-RFDFKISKIIEGGKERQDSVYNALNSIG-DCDIVLIHDGARAFVSNKIIEDG 119
Query: 183 LMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
+ + GAA GV K TIK N E F V T +R +L +QTPQ K +L+KKG V
Sbjct: 120 IKYSREFGAAAPGVMPKDTIKVKNLEGFSVDTPNRASLVAVQTPQCFKYNLIKKGHNKVK 179
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
E ++VTDD IVE L VY+ EG Y NIKVTTP+DL++AE +
Sbjct: 180 NEKIQVTDDTMIVELLGEKVYLFEGDYKNIKVTTPEDLILAEHFV 224
>sp|A4J0Y3|ISPD_DESRM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Desulfotomaculum reducens (strain MI-1) GN=ispD PE=3
SV=1
Length = 234
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 135/224 (60%), Gaps = 3/224 (1%)
Query: 67 SVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF 126
++ ++ A G G RMG + KQYL L +PI ++ ++ ++ IV+V P +
Sbjct: 3 NIVAVIPAAGMGSRMGTEVKKQYLKLQDRPILAHTIDALEQVPDITGIVLVVSPGEETLC 62
Query: 127 EETKEKINVDLKFS--LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL 183
+E K N+ K +PG + RQ SVY GL + ++ELV IHD ARPLV ++ ++
Sbjct: 63 QELILKGNLFNKIMAVVPGGDHRQTSVYHGLCSLPGDTELVVIHDGARPLVQRAEISHII 122
Query: 184 MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNR 243
+A RVGAA L VP K T+K N + +V+ T +R+ LW +QTPQV +L+ K +
Sbjct: 123 KEARRVGAAALAVPVKDTVKLVNDQGYVIATPNREKLWAVQTPQVFNYELILKAHQDARE 182
Query: 244 EGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+G+ TDD ++VE L PV + +GSY NIK+TTP+D+++A+ L
Sbjct: 183 KGVYATDDCALVEALGQPVKLVQGSYENIKITTPEDMVMAQAFL 226
>sp|Q8R7S6|ISPD_THETN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=ispD PE=3 SV=1
Length = 227
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 133/224 (59%), Gaps = 3/224 (1%)
Query: 67 SVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF 126
+VS +++A GR RM ++ K YL + G+P+ YS F + +KEI+VV P ++
Sbjct: 2 NVSAVIVAAGRSTRMNKSLNKVYLSIAGKPVLYYSIKAFDEIEWIKEIIVVTSPEETEYC 61
Query: 127 EET---KEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVL 183
+E K N K G+ERQ SVY+G+ VD + E+V IHD ARPLV + + + +
Sbjct: 62 QENVLEKFYWNKPFKIVKGGEERQYSVYNGISVVDKDCEIVAIHDGARPLVTKEIIMEAI 121
Query: 184 MDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNR 243
A AA +GVP K TIK A+ ++F++ T DR+ LW +QTPQV + +L+ K
Sbjct: 122 KAAYLYKAAAVGVPVKDTIKVADEDNFILDTPDRRYLWAIQTPQVFEKELIVKAHRKALE 181
Query: 244 EGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
EG TDD +VE + V + EG Y NIK+TTP+DL++AE L
Sbjct: 182 EGFLGTDDSVLVERMGFKVKLVEGDYKNIKITTPEDLVVAELFL 225
>sp|A4IJG4|ISPD_GEOTN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=ispD PE=3 SV=1
Length = 228
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 133/219 (60%), Gaps = 4/219 (1%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I+LA G+GKRM A M KQ++ L G+P+ + + F IV+V +P+ FE+
Sbjct: 6 IVLAAGQGKRMNAGMNKQFIELGGEPLIVRTLKVFDGDERCNGIVLVVNPTERGQFEQLF 65
Query: 131 EKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALR 188
E+ + + F+ G+ERQ SVY+GLQ + + E+V IHD ARP V + + ++ A++
Sbjct: 66 ERYRIRKVVAFADGGQERQHSVYNGLQALR-SGEIVLIHDGARPFVRIRHLHELADAAVQ 124
Query: 189 VGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEV 248
GAA+ V K TIK+ + FV +T+DR +LW +QTPQ + L+ + E + G
Sbjct: 125 YGAAIPAVRVKDTIKKVDG-LFVEQTIDRSSLWAVQTPQAFRLSLIMEAHEEAKKAGYLG 183
Query: 249 TDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
TDD S+VE L PV I EG Y NIK+TTP+DLL AE IL
Sbjct: 184 TDDASLVERLGRPVKILEGDYRNIKLTTPEDLLFAEAIL 222
>sp|A7GJ99|ISPD_CLOBL 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Langeland / NCTC 10281
/ Type F) GN=ispD PE=3 SV=1
Length = 229
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 137/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSAHESIDEIVLVTLEDKIEVCSD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRCA 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K TIK N + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTIKIKNEKEFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|Q9PJT1|ISPD_CHLMU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=ispD PE=3
SV=1
Length = 218
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 12/222 (5%)
Query: 67 SVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF 126
S S++LL GGRG+R + PKQY PL G+P+ L++ +++ + ++EIVVVC+ Y ++F
Sbjct: 4 SCSLVLLGGGRGERFNSPQPKQYTPLCGEPLILHALHSYQSLPFIQEIVVVCEEHYQELF 63
Query: 127 EETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+KF+ PG RQDSV+SGLQ+V VC+HD RP V + +V +V A
Sbjct: 64 SP------YSVKFASPGALRQDSVFSGLQQVSL--PWVCVHDGVRPFVYANEVSEVCSAA 115
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
L+ GAA L A TIK VRTLDR + + TPQ I ++LK+G L N
Sbjct: 116 LKTGAAALATSATYTIKSRTP----VRTLDRDAVAVIHTPQCINTEILKEGLLLANMMDF 171
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
++DD E L + + +K+T P+DLL AE +L+
Sbjct: 172 TLSDDSEAAELLGIEPTLVFSNRVQMKITYPEDLLFAEALLS 213
>sp|A5I7N1|ISPD_CLOBH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=ispD PE=3 SV=1
Length = 229
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ +
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYT 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K TIK N + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A7FZ94|ISPD_CLOB1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=ispD PE=3 SV=1
Length = 229
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ +
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYT 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K TIK N + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|C1FMX6|ISPD_CLOBJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Kyoto / Type A2)
GN=ispD PE=3 SV=1
Length = 229
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ +
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYT 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K TIK N + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|B1KTA8|ISPD_CLOBM 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Loch Maree / Type A3)
GN=ispD PE=3 SV=1
Length = 229
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 134/221 (60%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ E
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVTLEDKIEVCSE 64
Query: 129 TKEK--INVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K IN K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ + A
Sbjct: 65 IIDKYSINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYA 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA G+ K TIK N + F + T +R+ L+ QTPQ +++ E + +
Sbjct: 125 NQYGAAACGIIPKDTIKIKNEKGFAIDTPNREDLFIAQTPQCFNYNIILDCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLEDYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|A7Z0L2|ISPD_BACA2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispD
PE=3 SV=1
Length = 232
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 70 VILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE- 128
V++ A G+GKRM A K ++ L G P+ +++ F ++I++V + S + F +
Sbjct: 5 VVIPAAGQGKRMKAGKNKLFISLKGAPVIIHTLRVFESHAPCQKIILVINESEREDFRQL 64
Query: 129 -TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDAL 187
+ I +++ G ERQ SVY GL+ +D S +V +HD ARP V + + K++ A
Sbjct: 65 LAQFPIQTEIELVTGGAERQHSVYEGLKMIDKES-VVLVHDGARPFVTHQHIDKLVETAE 123
Query: 188 RVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE 247
GAAVL VP K TIK A S V T DR +LW +QTPQ + LLK +G
Sbjct: 124 EAGAAVLAVPVKDTIKRAEG-SRVAETFDRSSLWAVQTPQAFRLSLLKTAHMEAENKGFL 182
Query: 248 VTDDVSIVEHLK-HPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
TDD S+VE L + V I EGSYTNIK+TTPDDL+ AE I+ S
Sbjct: 183 GTDDASLVERLDGYQVSIVEGSYTNIKLTTPDDLIFAEAIMKAES 227
>sp|A8MLB1|ISPD_ALKOO 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus oremlandii (strain OhILAs) GN=ispD PE=3
SV=1
Length = 236
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 3/227 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRMG + KQY+ L QPI ++ F M + EI++V + ++
Sbjct: 8 SVIIVAAGKGKRMGRDYNKQYIQLEAQPIVAHTIKVFEEMDCINEIILVVGAGEVEFLKK 67
Query: 129 TKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMD 185
+ ++ K S G ER+DSVY+GL+ V + +V IHD ARPL+ +++ ++
Sbjct: 68 SIIEVYGFQKVSAIVEGGLERRDSVYNGLKAVSQDCSIVLIHDGARPLITKDIIEESIIV 127
Query: 186 ALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREG 245
A GA + VP K TIK +N V+ T R LW +QTPQ + DL+ + + +
Sbjct: 128 AKESGACIAAVPVKDTIKISNDNMEVIHTPKRDNLWSVQTPQTFQYDLILEAYNHQQPKD 187
Query: 246 LEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 292
TDD I+E L H V I GSY NIK+TTP+DL++AE IL E
Sbjct: 188 STATDDAMILEALGHTVKIIHGSYNNIKITTPEDLIVAEEILKTRRE 234
>sp|C3KVS6|ISPD_CLOB6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain 657 / Type Ba4) GN=ispD
PE=3 SV=1
Length = 229
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLNKFSTHESIDEIVLVALEDKIEVCSD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ +
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYV 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K T+K + + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTVKIKDEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EGSY+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQIL 225
>sp|B1IGH9|ISPD_CLOBK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Okra / Type B1) GN=ispD
PE=3 SV=1
Length = 229
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G+GKRM +++ KQ+L + +PI Y+ FS + EIV+V ++ +
Sbjct: 5 SVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCGD 64
Query: 129 TKEKINVDL--KFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K N++ K GKERQDSVY+GL+ V + E+V IHD+ARP V S ++ +
Sbjct: 65 IIDKYNINKVSKIVPGGKERQDSVYNGLKAVSKDCEVVLIHDAARPFVTSDIIENGIRYT 124
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GAA GV K TIK + + F + T +R+ L+ +QTPQ +++ E + +
Sbjct: 125 NQYGAAACGVIPKDTIKIKSEKGFAIDTPNREDLFIVQTPQCFNYNIILDCHEKLKKHNK 184
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VTDD ++E+ VY+ EG+Y+NIK+TTP+DL++ E+IL
Sbjct: 185 KVTDDTMVLENYGKSVYLYEGNYSNIKITTPEDLILGEQIL 225
>sp|Q2RFM0|ISPD_MOOTA 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Moorella thermoacetica (strain ATCC 39073) GN=ispD
PE=3 SV=1
Length = 229
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFE 127
+S+I+ A GRG+R+G + K +LPL G+P+ YS V EI++V P +
Sbjct: 4 LSMIIAAAGRGRRLGREVNKVFLPLAGKPMLAYSLAVAVASPLVDEIIIVTRPDDIPLCR 63
Query: 128 E--TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMD 185
+ E G ERQDS+ GL+ V +E V +HD ARP + ++K ++
Sbjct: 64 QVVAGEGAGKVKAIVAGGAERQDSIAEGLKAVARAAEWVAVHDGARPFLTPALLEKTILA 123
Query: 186 ALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREG 245
A GAA+ +P K TIK+ V TLDRK LW QTPQV + + L + +G
Sbjct: 124 ARNTGAAIAALPVKETIKQGGEAGIVAATLDRKGLWSAQTPQVFRREWLVDAYREAAEKG 183
Query: 246 LEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ TDD ++VE L +PV + G TNIK+TTP DL++A +L
Sbjct: 184 WQATDDAALVERLGYPVKLVPGEETNIKITTPGDLVLAGALL 225
>sp|B2TIF4|ISPD_CLOBB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=ispD PE=3 SV=1
Length = 224
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 128/227 (56%), Gaps = 11/227 (4%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYS---- 123
VS I++AGG+GKRMG KQYL L G+PI Y+ +F V I++V PS+
Sbjct: 2 VSAIVVAGGKGKRMGTVQSKQYLSLNGKPILYYTIKSFLDCKLVDNIILVV-PSHEIDYC 60
Query: 124 --DIFEETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQK 181
+I E+ K+N K G ER DSVY+GL E S++V IHD RP V + ++
Sbjct: 61 EKEILEKNSLKVN---KIVAGGDERYDSVYNGLIEAK-GSDIVLIHDGVRPFVSKETIEN 116
Query: 182 VLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELV 241
+ + GAA GV K TIK + F + T +R L +QTPQ K DL+ + +
Sbjct: 117 AIKYSEEYGAAAPGVMPKDTIKIIDDNRFSIDTPNRSHLISVQTPQAFKFDLIYDCHKKI 176
Query: 242 NREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
E + +TDD + E+ + VYI G YTNIK+TTP+DL+I E ++N
Sbjct: 177 KNENVNITDDTMVAEYFGNKVYIYPGEYTNIKITTPEDLIIGEYLVN 223
>sp|Q18CD1|ISPD_CLOD6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium difficile (strain 630) GN=ispD PE=3 SV=1
Length = 237
Score = 151 bits (382), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 130/223 (58%), Gaps = 3/223 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SVI++A G G+RM ++ KQ++ L + I ++ F + + EIVV D F+E
Sbjct: 3 SVIIVAAGSGRRMNLDINKQFIKLREKEIIAHTIQVFYENINIDEIVVCIKKEEEDFFKE 62
Query: 129 TK-EKINV-DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
K N ++K + GKERQDS+Y+GL+++D N ++V IHD ARP V + + + + A
Sbjct: 63 NIINKYNFKNIKIAYGGKERQDSIYNGLKKLDKNCDIVLIHDGARPFVDHRIINESIKVA 122
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
A V+GVP TIK S+ V T +R LW QTPQ + +L+ +E +
Sbjct: 123 KEKKAVVVGVPVSDTIKIV-SDGTVKETPERNLLWAAQTPQTFEYNLIIDAYEQAYKNNY 181
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNL 289
TDD +VE++ V + GSY NIK+T+P+DL IAE+ILN+
Sbjct: 182 YGTDDSMLVENIGQSVTMVMGSYENIKITSPEDLNIAEQILNM 224
>sp|A6LPN9|ISPD_CLOB8 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=ispD PE=3 SV=1
Length = 226
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 130/224 (58%), Gaps = 13/224 (5%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFE 127
VS I+LAGGRGKRMG KQY+ L G PI Y+ F + +I++V D +
Sbjct: 2 VSAIVLAGGRGKRMGNIQSKQYIDLNGAPILYYTLKQFIENDLIDKIILVVPEDEKDYCK 61
Query: 128 ETKEKINVDLKFSLP-------GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQ 180
+E +N K+ L G ERQ+SVY+ L++++ S++V IHD ARP V K +
Sbjct: 62 --REVLN---KYGLKIDDLVSGGNERQESVYNALEKLE-KSDIVLIHDGARPFVSQKIIN 115
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+ A R AA GV K TIK +S +F V TL R L +QTPQ +L+ + +
Sbjct: 116 YAVEYAKRYKAAAPGVMPKDTIKIKDSNNFSVDTLVRSELVAIQTPQAFDFNLIYECHKE 175
Query: 241 VNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAE 284
+ + + VTDD S+VE L H VYI EG Y NIK+TTP+DL++AE
Sbjct: 176 IKKRCISVTDDTSVVELLGHKVYIYEGDYKNIKITTPEDLILAE 219
>sp|Q2LUS9|ISPD_SYNAS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Syntrophus aciditrophicus (strain SB) GN=ispD PE=3
SV=1
Length = 234
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 130/229 (56%), Gaps = 13/229 (5%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFE 127
V I+ AGG G+RM ++ PKQY + G P+ +++ + + EI++V P +F
Sbjct: 5 VVAIVPAGGSGRRMQSSNPKQYFLINGMPVLVHTLLRLQQFPLIDEILLVV-PHSDMVFV 63
Query: 128 ETKEKINVDLKFSLP--------GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDV 179
N++ + L G+ERQDSV +GL+ V E+V IHD RP V K +
Sbjct: 64 RD----NIEKPYQLTKIRGIVAGGRERQDSVRNGLKCVVEKDEIVVIHDGVRPFVTEKIL 119
Query: 180 QKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFE 239
+V+ A R GAA+ VPA T+KE +S+ + TLDRK +W QTPQ ++++ ++
Sbjct: 120 SRVIDAAHRSGAAIAAVPAMDTVKEVHSDGHISVTLDRKRIWLAQTPQAFHRRIIQEAYK 179
Query: 240 LVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
++ TDD S+VE L PV + GS TNIK+TTPDDL++AE L
Sbjct: 180 KAVQDDYYGTDDASLVERLGIPVEVVPGSCTNIKITTPDDLILAEAFLK 228
>sp|Q9KGF8|ISPD_BACHD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=ispD PE=3 SV=1
Length = 228
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 129/221 (58%), Gaps = 4/221 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
SV++ A G+GKRM A KQ++ L G+PI ++ F + +V+V + + E
Sbjct: 4 SVVIPAAGQGKRMRAGHNKQFIELGGKPILAHTLAVFEQDDWCTNVVIVANEQEIEEMGE 63
Query: 129 --TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+ +I+ K G+ERQ+SV++GL+ + + LV IHD ARP V K++ ++ A
Sbjct: 64 LANRYQISKAKKIVAGGRERQESVFAGLKALSQDG-LVLIHDGARPFVTEKEIHSLVETA 122
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ AAVL VP K TIK E+ V+ T+ R+ LW +QTPQ L+K+ + E +
Sbjct: 123 AKTHAAVLAVPVKDTIKRVEGEA-VLETMPREELWAVQTPQAFDLALIKQAHQKAENEQM 181
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
TDD S++E L + V + +GSY N K+TTP+DLL AE IL
Sbjct: 182 LGTDDASLMEWLGYSVAVVQGSYFNFKLTTPEDLLFAEAIL 222
>sp|A9VN98|ISPD_BACWK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus weihenstephanensis (strain KBAB4) GN=ispD
PE=3 SV=1
Length = 226
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 129/226 (57%), Gaps = 4/226 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + G PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINGVPIIVHTLRAFEKDKACKRIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V+ ++F G ERQDSVY+ LQ V E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVEKQVQFIQGGAERQDSVYNALQYVS-GVEYVLVHDGARPFVTNKMMQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K TIK+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTIKKVE-QGVVVETVERSQLKAVQTPQGFSVPLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 292
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 181 LGTDDASLVERVGKKVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|A6TWL0|ISPD_ALKMQ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispD
PE=3 SV=1
Length = 241
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 132/232 (56%), Gaps = 19/232 (8%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFE 127
V+VI++A G+GKRMG + KQY+ L +PI ++ F + E+ EI++V E
Sbjct: 7 VTVIVVAAGKGKRMGRSYNKQYIMLENKPILYHTLAVFEKHSEINEIILVVASG-----E 61
Query: 128 ETKEKINVDLKFSLP--------GKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDV 179
E + + K+ L G ER++SV +GL+E++ E+V +HD ARP + + +
Sbjct: 62 EEYCQGQIIKKYGLKKVRKVVAGGSERRNSVKNGLEELEEACEVVLVHDGARPFITKEVI 121
Query: 180 QKVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGF- 238
K + A GA ++ VP K TIK N + VV T +R+ LW +QTPQV + +LK+ +
Sbjct: 122 TKSIEVAYEEGAVIVAVPVKDTIKRVNEKMEVVETPERQQLWAVQTPQVFRSGILKRAYK 181
Query: 239 --ELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
E R G TDD +VE + V + G Y NIKVTTP+DL+I + ILN
Sbjct: 182 EAEDFERVG---TDDAVLVEAAGYTVKVVLGIYENIKVTTPEDLIIGQGILN 230
>sp|A5N4M5|ISPD_CLOK5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 /
NCIMB 10680) GN=ispD PE=3 SV=1
Length = 231
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 132/227 (58%), Gaps = 8/227 (3%)
Query: 66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSY 122
KS +++A G+GKRM + KQ++ + G+PI YS FS+ V +IV+VC + Y
Sbjct: 2 KSNYAVIVAAGKGKRMKMPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEY 61
Query: 123 SDIFEETKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQ 180
+E +K N D +K GKERQ SV++ L+ ++ N +V IHD ARP V + ++
Sbjct: 62 CK--QEIVKKYNFDKVVKIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIE 118
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+ + GA GV K TIK E F +TL RK L+ +QTPQ +L+ +
Sbjct: 119 DGIKYSNMYGACACGVVPKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKK 178
Query: 241 VNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ ++VTDD ++ E+ + VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 179 LANNKVQVTDDTTVAEYFGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|B9DY87|ISPD_CLOK1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium kluyveri (strain NBRC 12016) GN=ispD PE=3
SV=1
Length = 231
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 132/227 (58%), Gaps = 8/227 (3%)
Query: 66 KSVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVC---DPSY 122
KS +++A G+GKRM + KQ++ + G+PI YS FS+ V +IV+VC + Y
Sbjct: 2 KSNYAVIVAAGKGKRMKMPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEY 61
Query: 123 SDIFEETKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQ 180
+E +K N D +K GKERQ SV++ L+ ++ N +V IHD ARP V + ++
Sbjct: 62 CK--QEIVKKYNFDKVVKIVSGGKERQHSVFNALKVLE-NCSVVLIHDGARPFVTDRIIE 118
Query: 181 KVLMDALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFEL 240
+ + GA GV K TIK E F +TL RK L+ +QTPQ +L+ +
Sbjct: 119 DGIKYSNMYGACACGVVPKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKK 178
Query: 241 VNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+ ++VTDD ++ E+ + VY+ EGSY NIK+TTP+DL+IAE I
Sbjct: 179 LANNKVQVTDDTTVAEYFGNMVYLYEGSYDNIKITTPEDLIIAENIF 225
>sp|A8F958|ISPD_BACP2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus pumilus (strain SAFR-032) GN=ispD PE=3 SV=1
Length = 229
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 128/223 (57%), Gaps = 5/223 (2%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
V++ A G+GKRM A K ++ L P+ +++ F + K +++ + FE
Sbjct: 4 EVVIPAAGQGKRMKAGRNKLFIELKRMPVIIHTLKVFDAHAQCKRMILAINEEERQDFER 63
Query: 129 TKEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+ SL G+ERQ SVY GL+ V ++++V +HD ARP + + ++ A
Sbjct: 64 LLKVHAFQTPVSLVNGGEERQQSVYEGLKAVK-DADIVLVHDGARPFIKHTQIDLLVKAA 122
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ G+AV+ VP K TIK E V +T++R++LW +QTPQ + +LK+ E R G
Sbjct: 123 IEKGSAVVAVPVKDTIKRVQ-EGKVEQTIERQSLWAVQTPQAFRHSILKEAHEYAERTGF 181
Query: 247 EVTDDVSIVEHLK-HPVYITEGSYTNIKVTTPDDLLIAERILN 288
TDD S+VE L VYI +G YTNIK+TTPDDLL+A+ I++
Sbjct: 182 LGTDDASLVEQLHGENVYIVQGDYTNIKLTTPDDLLVAKAIMD 224
>sp|Q06755|ISPD_BACSU 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus subtilis (strain 168) GN=ispD PE=3 SV=2
Length = 232
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 5/228 (2%)
Query: 67 SVSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF 126
S V++ A G+GKRM A K ++ L G P+ +++ F + +I++V + + F
Sbjct: 2 SYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHF 61
Query: 127 EE--TKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
++ + ++ G ERQ SVY GL+ V ++V +HD ARP + + + +++
Sbjct: 62 QQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIA 120
Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
+A + GAA+L VP K TIK V T++R +LW +QTPQ + LL K R+
Sbjct: 121 EAEQTGAAILAVPVKDTIKRVQDLQ-VSETIERSSLWAVQTPQAFRLSLLMKAHAEAERK 179
Query: 245 GLEVTDDVSIVEHLK-HPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
G TDD S+VE ++ V + EGSYTNIK+TTPDDL AE I+ S
Sbjct: 180 GFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESES 227
>sp|A5D5L4|ISPD_PELTS 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
JCM 10971 / SI) GN=ispD PE=3 SV=1
Length = 238
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 122/215 (56%), Gaps = 3/215 (1%)
Query: 76 GRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK-EKIN 134
GRG RMG KQYL L G P+ + VK +V V P + F T E++
Sbjct: 12 GRGSRMGTETRKQYLSLAGLPVVGHVLRAMEASSAVKSVVTVVAPGEENYFRLTVVERLG 71
Query: 135 V-DLKFSLPG-KERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDALRVGAA 192
+ + +PG +ERQDSVY+GL + ++ +V +HD ARPL+ D+ V+ A GAA
Sbjct: 72 IRKVAAIVPGGEERQDSVYNGLLALAPDTGIVVVHDGARPLLSPGDINAVVQAAAAYGAA 131
Query: 193 VLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLEVTDDV 252
L VP K T+K A + FV+RTL R+ LW +QTPQ + D++ ++ TDD
Sbjct: 132 TLAVPVKDTVKMAGRDGFVLRTLSREHLWLVQTPQAFRYDIIMNAHRQARQKKYAATDDA 191
Query: 253 SIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
+VE L PV I GSY NIK+TTP+DL +AE ++
Sbjct: 192 GLVELLGRPVKIVAGSYENIKITTPEDLTVAEAVI 226
>sp|Q67JP5|ISPD_SYMTH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=ispD PE=3 SV=1
Length = 236
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 8/216 (3%)
Query: 68 VSVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFE 127
VSVI+ A G G+RMG KQ+LPL G+P+ + + FS V EIV+ + D+ E
Sbjct: 12 VSVIIPAAGSGRRMGGGTAKQFLPLRGEPVLVRTVRRFSECPLVDEIVI----AAGDV-E 66
Query: 128 ETKEKINVDLKFSL---PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
T+ + K + G ERQDSV++ LQ V +V +HD+ARPL+ + ++ VL
Sbjct: 67 ATRALVGHMPKVTRIVQGGAERQDSVWAALQAVHSRPRIVAVHDAARPLLTADVLKGVLQ 126
Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
A A V+ VP + TIK+ + VV T DR LW +QTPQV D+L + F +
Sbjct: 127 AAADHPAQVVAVPVQDTIKQVGPDGVVVATPDRSMLWAVQTPQVFWADVLVRAFRQAIAD 186
Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDL 280
G TDD S+VE + PV + G N+K+TTP D
Sbjct: 187 GFLGTDDASLVERIGVPVRVYRGHPGNLKLTTPTDF 222
>sp|B1I0S9|ISPDF_DESAP Bifunctional enzyme IspD/IspF OS=Desulforudis audaxviator (strain
MP104C) GN=ispDF PE=3 SV=1
Length = 394
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 117/224 (52%), Gaps = 10/224 (4%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I++A GR RMG KQY L G+P+ + F V +V+V P D +
Sbjct: 7 IVVAAGRSSRMGEGPKKQYRLLAGRPVLGRTLEVFEHAPAVDGVVLVVAPGEEDW---CR 63
Query: 131 EKINVDLKFS-----LPGKE-RQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
E+I F+ +PG E R+DSV++GLQ + LV +HD RP V ++ + V
Sbjct: 64 EEIVTRFGFTKVVAVVPGGEVRRDSVWAGLQALP-PCALVLVHDGVRPFVTARQIAAVAE 122
Query: 185 DALRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNRE 244
A GAA L VP K T+K V TL R+ LW +QTPQ + D+L K L
Sbjct: 123 AARECGAATLAVPPKDTVKLGGPPGAPVSTLPRENLWLVQTPQAFRFDVLIKAHHLARER 182
Query: 245 GLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILN 288
GL TDD S+ E + V + G+YTNIK+TTP+DL AE +L
Sbjct: 183 GLAATDDTSLAEAAGYDVRMVPGAYTNIKITTPEDLAFAEALLG 226
>sp|Q6HPT2|ISPD_BACHK 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis subsp. konkukian (strain
97-27) GN=ispD PE=3 SV=1
Length = 226
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 4/224 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V+ ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVEKPVQFIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 181 LGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQ 224
>sp|Q63HB4|ISPD_BACCZ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ZK / E33L) GN=ispD PE=3 SV=1
Length = 226
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 4/224 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V+ ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVEKPVQFIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 181 LGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQ 224
>sp|Q81VV5|ISPD_BACAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus anthracis GN=ispD PE=3 SV=1
Length = 226
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 4/224 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V+ ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVEKPVQFIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 181 LGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQ 224
>sp|A0R8F7|ISPD_BACAH 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus thuringiensis (strain Al Hakam) GN=ispD PE=3
SV=1
Length = 226
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 4/224 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V+ ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVEKPVQFIQGGAERQDSVYNAIQHTT-DVEYVLVHDGARPFVTNKVIQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 181 LGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQ 224
>sp|Q73FC1|ISPD_BACC1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 10987) GN=ispD PE=3 SV=1
Length = 226
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKACKNIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K V ++F G ERQDSVY+ +Q + E V +HD ARP V +K +Q VL A
Sbjct: 63 LMQKYPVKKPVQFIQGGAERQDSVYNAIQHTS-DVEYVLVHDGARPFVTNKVIQDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLKAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSSE 292
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++ +
Sbjct: 181 LGTDDASLVERIGKQVGVVEGSYYNIKVTTPEDLLIAESFLHVQKK 226
>sp|Q97EC9|ISPD_CLOAB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792
/ JCM 1419 / LMG 5710 / VKM B-1787) GN=ispD PE=3 SV=1
Length = 229
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEET- 129
I++A GRG RM N KQ++ + G+PI Y+ F R + EI++V S + +
Sbjct: 5 IIMAAGRGSRMKVNKNKQFILIQGKPILAYTIDKFQRSPLIDEIIIVAAESEINFCMQEI 64
Query: 130 --KEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDAL 187
K K N G ERQ SV +GL+ V ++ +V IHD ARP V +K ++ + A
Sbjct: 65 VYKYKFNKVKNIVSGGSERQQSVMNGLKAVK-SANIVLIHDGARPFVDNKIIENGIKYAE 123
Query: 188 RVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE 247
+ G A GV K TIK + + F +T+DR L+ +QTPQ K D + K +EG+
Sbjct: 124 KYGGAACGVQPKDTIKIKSEDGFSEKTIDRSKLFCVQTPQCFKYDSILKAHINAEKEGIL 183
Query: 248 VTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
TDD I E + VY+ +GSY N+K+TTPDDL AE +L +S
Sbjct: 184 ATDDTMIFEMSGNKVYLYDGSYENLKITTPDDLYAAETLLKKNS 227
>sp|A0PXS4|ISPD_CLONN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Clostridium novyi (strain NT) GN=ispD PE=3 SV=1
Length = 231
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPS-YSDIFEET 129
I++A G+G RM ++ KQ++ L G PI Y+ F + IV+V E
Sbjct: 7 IVVAAGKGTRMNTDINKQFINLKGNPILYYTLKKFQDNTSIDNIVLVLSKDEIGYCVENV 66
Query: 130 KEKINVDLKFSL--PGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDAL 187
+K ++D + GK RQ+SV SGL V +SE+V IHD ARP + + ++ + A
Sbjct: 67 LKKYHLDKVTHIVEGGKTRQESVISGLNAVK-DSEIVLIHDGARPFIEDRIIEDGIKYAK 125
Query: 188 RVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGLE 247
GA+ GV K TIK + F TL R+ L+ +QTPQ K DL+ + ++ +E
Sbjct: 126 LYGASACGVKVKDTIKVIAEDGFSKDTLKREELFSVQTPQCFKYDLILNCHKKALKDNIE 185
Query: 248 VTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERIL 287
VTDD S+VE H VY+ EGSY NIK+TTP+DL + E IL
Sbjct: 186 VTDDTSVVESYGHRVYLYEGSYNNIKITTPEDLPMGESIL 225
>sp|A7GJZ7|ISPD_BACCN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98)
GN=ispD PE=3 SV=1
Length = 226
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 130/224 (58%), Gaps = 4/224 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + ++I++ + FE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDEACEKIIMAINEQERSDFEA 62
Query: 129 TKEKINV--DLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K + +++F G ERQDSVY LQ V +E V +HD ARP V +K + +VL+ A
Sbjct: 63 LIQKYGIRKNVQFIQGGAERQDSVYHALQYVK-ETEYVLVHDGARPFVTNKMIHEVLIVA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
GA++ VP K TIK+ +++ V T++R L +QTPQ LL + + + G
Sbjct: 122 KEKGASICAVPVKDTIKKVVNDA-VFETVERSQLRAVQTPQGFSVALLLEAHQSAKQSGF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLS 290
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L++
Sbjct: 181 LGTDDASLVERIGKEVGVVEGSYYNIKVTTPEDLLIAESFLHVQ 224
>sp|C4Z312|ISPD_EUBE2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48)
GN=ispD PE=3 SV=1
Length = 227
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 6/220 (2%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIF-- 126
+ I+LAGG GKRM + +PKQY+ L G+P+ YS F V EI++V Y +
Sbjct: 3 TAIVLAGGSGKRMHSEIPKQYMQLNGKPVIYYSLKAFEESEHVDEIILVTAKEYIEYVRN 62
Query: 127 EETKEKINVDLKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
E + K GKER DSV++GLQ++ V IHD ARP + +
Sbjct: 63 EIAGSQFAKLTKIIEGGKERFDSVWAGLQQIS-EKGYVYIHDGARPCINQNIINACWETV 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
++ A V P K TIK A+++ + + T DRKTLW++QTPQV D++K+ + + +
Sbjct: 122 VQTDACVAAAPVKDTIKVADADEYAINTPDRKTLWQIQTPQVFSADVIKEAYSRLYEQNC 181
Query: 247 --EVTDDVSIVEHLKHP-VYITEGSYTNIKVTTPDDLLIA 283
VTDD +VE + + + Y NIK+TTP+D+ IA
Sbjct: 182 FDGVTDDAMVVERYGNSKIKLVNCGYCNIKITTPEDMEIA 221
>sp|B5YF77|ISPD_DICT6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
3960 / H-6-12) GN=ispD PE=3 SV=1
Length = 231
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 14/229 (6%)
Query: 71 ILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEETK 130
I++A G+ KR G + K + + G PI YS + ++++I++V +++ E K
Sbjct: 7 IVVAAGKSKRFGED--KLLINIKGMPIVYYSIRKLHDIKDIEKIILVVR---NEMLEYYK 61
Query: 131 EKINVDLKFS------LPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLM 184
EKI D K L G+ERQDSVY+ L+ VDF+ + V IHD+ARP V K +++++
Sbjct: 62 EKIK-DWKLEKVYKLVLGGEERQDSVYNALKSVDFHCDYVLIHDAARPFVSIKKIEELIK 120
Query: 185 DALRVG-AAVLGVPAKATIKEA-NSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVN 242
+A+LG+P K TIK N+ ++ TLDR LW +QTPQ+ +++K+ +
Sbjct: 121 FCTENSLSAILGIPVKDTIKVVDNTTKRIMETLDRSKLWIIQTPQMFPFEIIKEAHKKAR 180
Query: 243 REGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNLSS 291
E TDD S+VE L PVY+ EG NIK+TT DDLL E IL+ S
Sbjct: 181 EENFVGTDDASLVERLGIPVYVIEGEPFNIKITTKDDLLWMEGILSKSE 229
>sp|Q81J63|ISPD_BACCR 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ispD
PE=3 SV=1
Length = 226
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Query: 69 SVILLAGGRGKRMGANMPKQYLPLLGQPIALYSFYTFSRMVEVKEIVVVCDPSYSDIFEE 128
++I+ A G+GKRMGA K +L + PI +++ F + K I++ + FEE
Sbjct: 3 TLIIPAAGQGKRMGAGKNKLFLLIDEVPIIVHTLRAFEKDKACKSIIMAINEEERPYFEE 62
Query: 129 TKEKINVD--LKFSLPGKERQDSVYSGLQEVDFNSELVCIHDSARPLVLSKDVQKVLMDA 186
+K ++ ++F G ERQDSVY+ LQ E V +HD ARP V +K ++ VL A
Sbjct: 63 LMQKYQIEKHVQFIQGGAERQDSVYNALQYAS-GVEYVLVHDGARPFVTNKVIRDVLTAA 121
Query: 187 LRVGAAVLGVPAKATIKEANSESFVVRTLDRKTLWEMQTPQVIKPDLLKKGFELVNREGL 246
+ GA++ VP K T+K+ + VV T++R L +QTPQ LL + +
Sbjct: 122 EKYGASICAVPVKDTVKKVE-QGVVVETVERSQLNAVQTPQGFSVSLLLEAHRSAKQSCF 180
Query: 247 EVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLIAERILNL 289
TDD S+VE + V + EGSY NIKVTTP+DLLIAE L +
Sbjct: 181 LGTDDASLVERVGKQVGVVEGSYYNIKVTTPEDLLIAESFLRV 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,255,072
Number of Sequences: 539616
Number of extensions: 4101337
Number of successful extensions: 13876
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 12125
Number of HSP's gapped (non-prelim): 837
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)