Query 022658
Match_columns 294
No_of_seqs 228 out of 2058
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 05:11:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022658.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022658hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.7E-83 5.8E-88 550.3 18.7 285 1-286 1-285 (303)
2 KOG0373 Serine/threonine speci 100.0 2E-76 4.3E-81 500.9 18.4 285 1-286 4-289 (306)
3 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.6E-74 7.7E-79 522.6 29.1 284 2-286 1-284 (285)
4 PTZ00239 serine/threonine prot 100.0 7E-74 1.5E-78 523.7 30.1 286 1-286 1-286 (303)
5 cd07420 MPP_RdgC Drosophila me 100.0 2.8E-73 6.1E-78 522.1 29.2 280 2-283 6-320 (321)
6 PTZ00480 serine/threonine-prot 100.0 1.6E-72 3.5E-77 516.4 28.4 284 1-286 9-301 (320)
7 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 8.2E-72 1.8E-76 509.0 27.0 283 2-286 1-292 (293)
8 PTZ00244 serine/threonine-prot 100.0 2.4E-71 5.3E-76 505.4 27.8 281 3-285 4-293 (294)
9 cd07417 MPP_PP5_C PP5, C-termi 100.0 4.7E-71 1E-75 508.2 26.9 284 3-288 16-306 (316)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 1.5E-70 3.2E-75 503.6 29.1 284 2-288 2-299 (305)
11 KOG0374 Serine/threonine speci 100.0 4.6E-71 1E-75 508.4 23.2 271 15-286 31-303 (331)
12 smart00156 PP2Ac Protein phosp 100.0 7.3E-70 1.6E-74 492.3 27.6 270 16-287 1-271 (271)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 6.7E-67 1.4E-71 486.7 28.7 284 3-287 12-367 (377)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.1E-67 1.5E-71 481.1 27.3 272 13-285 18-311 (311)
15 KOG0371 Serine/threonine prote 100.0 1.6E-65 3.4E-70 443.3 15.0 284 2-286 19-302 (319)
16 KOG0375 Serine-threonine phosp 100.0 6.5E-63 1.4E-67 443.6 12.9 282 3-286 48-342 (517)
17 KOG0377 Protein serine/threoni 100.0 1.6E-56 3.4E-61 410.8 12.5 288 2-291 120-437 (631)
18 KOG0376 Serine-threonine phosp 100.0 4.4E-48 9.5E-53 361.8 12.3 284 3-288 170-460 (476)
19 cd00144 MPP_PPP_family phospho 100.0 2.7E-36 5.8E-41 265.6 21.3 214 46-271 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 8E-28 1.7E-32 215.2 19.1 192 43-276 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 4.7E-28 1E-32 211.6 15.7 177 46-257 1-197 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 2.6E-26 5.7E-31 204.1 17.3 201 43-276 1-223 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 3.2E-26 6.9E-31 202.0 16.6 116 46-164 2-143 (222)
24 cd07421 MPP_Rhilphs Rhilph pho 99.9 9E-26 2E-30 203.5 17.1 190 43-261 2-283 (304)
25 PRK00166 apaH diadenosine tetr 99.9 1.3E-25 2.9E-30 203.4 17.2 219 43-275 1-261 (275)
26 PHA02239 putative protein phos 99.9 1.4E-25 3E-30 199.2 14.2 175 43-259 1-221 (235)
27 PRK11439 pphA serine/threonine 99.9 3.6E-25 7.8E-30 194.8 16.1 179 42-259 16-208 (218)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 4.6E-24 9.9E-29 186.3 16.4 170 43-242 1-184 (207)
29 cd07422 MPP_ApaH Escherichia c 99.9 1.3E-24 2.9E-29 195.0 11.6 120 45-168 1-126 (257)
30 TIGR00668 apaH bis(5'-nucleosy 99.9 4.5E-24 9.7E-29 192.2 11.7 122 43-168 1-128 (279)
31 PRK09968 serine/threonine-spec 99.9 2E-22 4.3E-27 177.4 15.2 117 42-164 14-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 2.3E-13 4.9E-18 110.9 10.1 160 43-237 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.5 3.4E-12 7.4E-17 105.8 15.7 82 44-163 1-85 (155)
34 PRK09453 phosphodiesterase; Pr 99.4 8.2E-12 1.8E-16 106.7 15.6 69 43-115 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.4 1.6E-11 3.4E-16 102.5 14.9 63 43-114 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.3 2.2E-11 4.7E-16 100.3 13.5 125 43-242 1-125 (156)
37 cd07379 MPP_239FB Homo sapiens 99.2 8.2E-11 1.8E-15 95.6 10.1 118 44-242 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.1 3.1E-10 6.7E-15 100.7 10.5 157 44-238 2-208 (238)
39 cd07388 MPP_Tt1561 Thermus the 99.1 9.1E-09 2E-13 90.9 18.6 72 42-114 4-75 (224)
40 cd07394 MPP_Vps29 Homo sapiens 99.1 5.4E-09 1.2E-13 89.2 16.5 59 44-114 1-65 (178)
41 PRK05340 UDP-2,3-diacylglucosa 99.0 8.3E-09 1.8E-13 92.1 15.0 214 43-284 1-239 (241)
42 COG0639 ApaH Diadenosine tetra 99.0 2.3E-09 5E-14 86.6 8.6 143 116-260 3-154 (155)
43 cd07392 MPP_PAE1087 Pyrobaculu 99.0 2.9E-08 6.2E-13 84.2 14.8 66 45-116 1-67 (188)
44 cd07404 MPP_MS158 Microscilla 98.9 3.3E-09 7.1E-14 89.0 8.6 67 45-114 1-68 (166)
45 COG2129 Predicted phosphoester 98.9 3.8E-08 8.2E-13 85.6 15.0 212 42-284 3-225 (226)
46 cd00838 MPP_superfamily metall 98.9 1.1E-08 2.3E-13 80.4 10.6 117 46-242 1-119 (131)
47 cd07403 MPP_TTHA0053 Thermus t 98.8 3.6E-08 7.9E-13 79.7 11.1 107 46-242 1-107 (129)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 2.6E-08 5.6E-13 88.4 11.1 206 45-276 1-230 (231)
49 COG0622 Predicted phosphoester 98.8 3E-07 6.5E-12 77.9 14.9 159 43-286 2-166 (172)
50 cd07400 MPP_YydB Bacillus subt 98.8 1.3E-07 2.9E-12 77.2 12.4 118 45-243 1-130 (144)
51 cd07399 MPP_YvnB Bacillus subt 98.7 6.1E-07 1.3E-11 78.7 14.8 194 44-285 2-213 (214)
52 cd07396 MPP_Nbla03831 Homo sap 98.6 3.4E-06 7.4E-11 76.4 16.2 72 44-115 2-87 (267)
53 cd07395 MPP_CSTP1 Homo sapiens 98.5 7.8E-06 1.7E-10 73.6 17.9 64 215-282 195-259 (262)
54 COG2908 Uncharacterized protei 98.5 1.7E-06 3.6E-11 76.1 11.1 198 46-277 1-229 (237)
55 cd07385 MPP_YkuE_C Bacillus su 98.4 4E-07 8.6E-12 79.7 5.8 71 43-115 2-77 (223)
56 cd07402 MPP_GpdQ Enterobacter 98.4 1.4E-05 3.1E-10 70.6 15.6 67 44-114 1-83 (240)
57 PRK11148 cyclic 3',5'-adenosin 98.4 2.4E-05 5.3E-10 71.1 17.2 71 42-114 14-98 (275)
58 PRK11340 phosphodiesterase Yae 98.4 5.6E-07 1.2E-11 81.8 6.5 70 43-114 50-125 (271)
59 PRK04036 DNA polymerase II sma 98.3 2.3E-05 5E-10 77.3 17.0 114 42-163 243-388 (504)
60 cd07393 MPP_DR1119 Deinococcus 98.3 4.3E-06 9.2E-11 74.2 10.7 66 45-114 1-84 (232)
61 cd07398 MPP_YbbF-LpxH Escheric 98.2 4E-06 8.7E-11 73.0 7.8 30 213-242 176-205 (217)
62 TIGR03729 acc_ester putative p 98.1 4.4E-06 9.6E-11 74.3 6.4 68 44-114 1-74 (239)
63 COG1409 Icc Predicted phosphoh 98.1 0.00011 2.5E-09 66.2 15.6 73 43-117 1-81 (301)
64 cd07401 MPP_TMEM62_N Homo sapi 98.1 7.8E-05 1.7E-09 67.2 13.3 71 45-115 2-90 (256)
65 TIGR00619 sbcd exonuclease Sbc 98.1 9E-06 2E-10 73.2 6.6 73 43-115 1-89 (253)
66 cd07390 MPP_AQ1575 Aquifex aeo 98.0 1.8E-05 4E-10 66.6 7.5 66 45-115 1-83 (168)
67 PF06874 FBPase_2: Firmicute f 98.0 5.8E-05 1.3E-09 74.5 11.8 59 53-116 167-226 (640)
68 cd07383 MPP_Dcr2 Saccharomyces 98.0 4E-05 8.7E-10 66.2 9.4 70 43-112 3-87 (199)
69 cd00839 MPP_PAPs purple acid p 98.0 5.7E-05 1.2E-09 68.9 10.8 69 43-115 5-82 (294)
70 PHA02546 47 endonuclease subun 97.9 2.2E-05 4.7E-10 73.7 6.5 72 43-114 1-89 (340)
71 cd08165 MPP_MPPE1 human MPPE1 97.9 7.8E-05 1.7E-09 62.2 9.1 47 68-114 37-89 (156)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.8 4.1E-05 8.9E-10 66.6 5.8 72 44-116 1-91 (223)
73 KOG3325 Membrane coat complex 97.8 0.00069 1.5E-08 55.4 11.8 153 45-291 3-162 (183)
74 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.00013 2.8E-09 66.1 7.6 71 45-115 1-87 (262)
75 TIGR00024 SbcD_rel_arch putati 97.7 0.00014 3.1E-09 64.3 7.2 69 43-115 15-103 (225)
76 cd07391 MPP_PF1019 Pyrococcus 97.5 0.00022 4.7E-09 60.3 6.3 57 58-115 30-89 (172)
77 PF14582 Metallophos_3: Metall 97.5 0.0013 2.8E-08 57.7 11.0 215 42-280 5-252 (255)
78 TIGR00583 mre11 DNA repair pro 97.5 0.00026 5.7E-09 67.9 7.0 54 42-95 3-68 (405)
79 PRK10966 exonuclease subunit S 97.4 0.00027 5.8E-09 68.0 5.9 72 43-115 1-88 (407)
80 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00032 6.9E-09 62.6 5.4 68 46-115 2-95 (243)
81 COG1408 Predicted phosphohydro 97.3 0.00047 1E-08 63.1 6.0 71 43-115 45-119 (284)
82 PLN02533 probable purple acid 97.3 0.0027 5.8E-08 61.5 11.1 71 42-115 139-212 (427)
83 cd08163 MPP_Cdc1 Saccharomyces 97.2 0.017 3.6E-07 52.2 14.5 32 212-245 202-233 (257)
84 KOG0376 Serine-threonine phosp 97.1 0.00019 4.1E-09 68.8 1.8 244 14-260 13-298 (476)
85 cd08166 MPP_Cdc1_like_1 unchar 97.0 0.0015 3.3E-08 56.4 5.7 48 67-114 40-93 (195)
86 cd07384 MPP_Cdc1_like Saccharo 96.9 0.002 4.3E-08 54.5 5.9 50 66-115 42-101 (171)
87 cd00845 MPP_UshA_N_like Escher 96.8 0.0016 3.5E-08 58.1 4.8 66 44-114 2-82 (252)
88 cd07380 MPP_CWF19_N Schizosacc 96.8 0.0037 8E-08 51.8 6.3 118 46-237 1-121 (150)
89 COG0420 SbcD DNA repair exonuc 96.7 0.0046 9.9E-08 59.0 6.9 74 43-116 1-90 (390)
90 COG4186 Predicted phosphoester 96.6 0.007 1.5E-07 50.1 6.6 67 45-115 6-87 (186)
91 COG1407 Predicted ICC-like pho 96.5 0.0063 1.4E-07 53.9 6.1 72 41-115 18-111 (235)
92 cd08164 MPP_Ted1 Saccharomyces 96.4 0.0084 1.8E-07 51.8 6.1 66 48-113 22-110 (193)
93 PF08321 PPP5: PPP5 TPR repeat 96.3 0.0069 1.5E-07 46.3 4.6 39 3-41 57-95 (95)
94 cd07410 MPP_CpdB_N Escherichia 96.3 0.0049 1.1E-07 56.0 4.4 65 44-113 2-94 (277)
95 cd07387 MPP_PolD2_C PolD2 (DNA 96.3 0.58 1.3E-05 42.3 17.5 51 228-283 205-257 (257)
96 COG1311 HYS2 Archaeal DNA poly 96.1 0.52 1.1E-05 45.9 17.4 205 44-285 227-472 (481)
97 cd07378 MPP_ACP5 Homo sapiens 95.5 0.028 6.1E-07 50.7 5.9 69 44-114 2-83 (277)
98 cd07408 MPP_SA0022_N Staphyloc 95.4 0.023 5.1E-07 51.0 5.0 65 44-113 2-81 (257)
99 cd07412 MPP_YhcR_N Bacillus su 94.7 0.044 9.6E-07 50.2 4.7 65 44-113 2-87 (288)
100 COG1768 Predicted phosphohydro 94.1 0.1 2.2E-06 44.4 5.0 44 68-115 42-87 (230)
101 cd00842 MPP_ASMase acid sphing 93.7 0.13 2.7E-06 47.1 5.4 72 44-116 39-124 (296)
102 cd07411 MPP_SoxB_N Thermus the 93.4 0.11 2.4E-06 46.8 4.5 64 45-114 3-95 (264)
103 cd07409 MPP_CD73_N CD73 ecto-5 93.3 0.14 3.1E-06 46.6 5.2 66 44-114 2-94 (281)
104 KOG3662 Cell division control 93.3 0.18 3.9E-06 48.3 5.8 46 68-113 92-143 (410)
105 KOG2863 RNA lariat debranching 93.1 0.11 2.4E-06 48.6 4.1 74 43-116 1-90 (456)
106 PRK09419 bifunctional 2',3'-cy 93.0 0.11 2.4E-06 56.6 4.6 66 43-113 661-735 (1163)
107 KOG1378 Purple acid phosphatas 93.0 0.93 2E-05 43.9 10.2 34 216-250 322-355 (452)
108 cd07406 MPP_CG11883_N Drosophi 92.8 0.17 3.7E-06 45.4 4.9 56 53-113 21-82 (257)
109 TIGR00282 metallophosphoestera 90.8 0.4 8.8E-06 43.5 4.9 67 43-114 1-71 (266)
110 PTZ00422 glideosome-associated 90.7 2.5 5.4E-05 40.5 10.3 72 42-114 26-109 (394)
111 COG0737 UshA 5'-nucleotidase/2 90.0 0.33 7.1E-06 48.2 3.9 68 42-114 26-115 (517)
112 cd07407 MPP_YHR202W_N Saccharo 89.2 0.41 9E-06 43.8 3.7 66 44-114 7-97 (282)
113 cd07405 MPP_UshA_N Escherichia 89.1 0.39 8.5E-06 43.9 3.5 66 44-114 2-87 (285)
114 cd08162 MPP_PhoA_N Synechococc 88.8 0.61 1.3E-05 43.3 4.5 64 45-113 3-90 (313)
115 PF04042 DNA_pol_E_B: DNA poly 88.4 0.72 1.6E-05 39.8 4.5 72 45-116 1-93 (209)
116 cd07382 MPP_DR1281 Deinococcus 88.4 0.92 2E-05 40.9 5.3 66 44-114 1-70 (255)
117 KOG3947 Phosphoesterases [Gene 87.3 0.73 1.6E-05 41.8 3.8 65 43-115 62-127 (305)
118 TIGR01390 CycNucDiestase 2',3' 87.3 0.63 1.4E-05 47.4 4.0 65 44-113 4-98 (626)
119 PRK09420 cpdB bifunctional 2', 87.3 0.68 1.5E-05 47.4 4.2 68 41-113 24-121 (649)
120 KOG0918 Selenium-binding prote 87.3 0.04 8.7E-07 52.0 -4.2 202 70-285 48-262 (476)
121 PRK09419 bifunctional 2',3'-cy 86.3 0.77 1.7E-05 50.2 4.1 66 43-113 42-138 (1163)
122 COG3855 Fbp Uncharacterized pr 85.3 0.55 1.2E-05 45.4 2.2 42 70-116 191-232 (648)
123 KOG1432 Predicted DNA repair e 85.0 1.2 2.7E-05 41.6 4.2 71 44-115 55-148 (379)
124 PRK11907 bifunctional 2',3'-cy 83.0 1.5 3.3E-05 45.9 4.5 66 43-113 116-212 (814)
125 KOG2476 Uncharacterized conser 81.3 3.6 7.8E-05 39.9 5.8 69 42-111 5-75 (528)
126 KOG3339 Predicted glycosyltran 80.2 14 0.00031 31.7 8.4 85 71-161 40-140 (211)
127 COG3855 Fbp Uncharacterized pr 80.1 7.8 0.00017 37.8 7.6 40 215-254 515-560 (648)
128 TIGR01530 nadN NAD pyrophospha 80.0 2.9 6.2E-05 42.0 5.1 64 45-113 3-93 (550)
129 PRK09558 ushA bifunctional UDP 77.2 2.8 6E-05 42.0 4.0 67 43-114 35-121 (551)
130 PTZ00235 DNA polymerase epsilo 76.9 11 0.00023 34.7 7.3 72 43-114 28-122 (291)
131 PRK09418 bifunctional 2',3'-cy 76.2 3.1 6.8E-05 43.5 4.1 67 42-113 39-141 (780)
132 KOG2679 Purple (tartrate-resis 74.6 1.9 4.2E-05 39.2 1.8 68 43-114 44-126 (336)
133 smart00854 PGA_cap Bacterial c 54.6 22 0.00048 31.3 4.7 39 218-259 197-235 (239)
134 PF06874 FBPase_2: Firmicute f 49.1 13 0.00028 37.6 2.5 41 214-254 507-553 (640)
135 PF02875 Mur_ligase_C: Mur lig 48.4 36 0.00078 24.9 4.3 68 43-110 12-81 (91)
136 KOG2310 DNA repair exonuclease 47.5 59 0.0013 32.6 6.6 52 42-93 13-76 (646)
137 PF13258 DUF4049: Domain of un 47.3 22 0.00049 31.7 3.4 89 70-165 85-186 (318)
138 COG1692 Calcineurin-like phosp 44.6 34 0.00073 30.8 4.1 11 44-54 2-12 (266)
139 COG0634 Hpt Hypoxanthine-guani 41.6 2.2E+02 0.0048 24.2 9.3 75 15-93 11-116 (178)
140 TIGR03729 acc_ester putative p 41.4 36 0.00078 29.8 4.0 29 212-240 195-223 (239)
141 PRK10773 murF UDP-N-acetylmura 41.1 76 0.0016 30.8 6.5 67 42-109 324-392 (453)
142 KOG3425 Uncharacterized conser 40.8 99 0.0021 24.7 5.8 60 55-114 12-79 (128)
143 cd07382 MPP_DR1281 Deinococcus 39.4 24 0.00052 31.8 2.5 37 72-109 1-37 (255)
144 TIGR00282 metallophosphoestera 38.6 37 0.00079 30.9 3.6 39 72-114 2-41 (266)
145 PF14164 YqzH: YqzH-like prote 36.4 86 0.0019 22.1 4.3 35 3-37 6-47 (64)
146 COG1692 Calcineurin-like phosp 33.2 1.2E+02 0.0025 27.4 5.7 38 72-111 2-40 (266)
147 COG4320 Uncharacterized protei 32.3 93 0.002 29.2 5.0 62 30-99 44-109 (410)
148 PLN02965 Probable pheophorbida 31.9 1.9E+02 0.0042 25.0 7.1 21 216-236 59-81 (255)
149 PF14178 YppF: YppF-like prote 30.5 1.8E+02 0.0039 20.2 5.0 55 1-68 1-55 (60)
150 PF03128 CXCXC: CXCXC repeat; 30.1 21 0.00046 17.2 0.3 13 281-293 2-14 (14)
151 TIGR01143 murF UDP-N-acetylmur 29.7 1.9E+02 0.0041 27.6 7.1 69 42-111 295-365 (417)
152 PF12641 Flavodoxin_3: Flavodo 29.4 2.4E+02 0.0053 23.3 6.8 53 46-98 2-67 (160)
153 PF09587 PGA_cap: Bacterial ca 29.4 87 0.0019 27.7 4.4 40 217-259 207-246 (250)
154 cd07381 MPP_CapA CapA and rela 26.2 1.2E+02 0.0027 26.4 4.8 40 217-259 198-237 (239)
155 TIGR00550 nadA quinolinate syn 25.8 1.2E+02 0.0026 28.2 4.7 36 42-80 28-63 (310)
156 KOG3770 Acid sphingomyelinase 25.4 1.5E+02 0.0032 30.0 5.5 62 56-117 195-266 (577)
157 PHA02894 hypothetical protein; 25.2 97 0.0021 23.1 3.2 30 264-293 4-35 (97)
158 PF09949 DUF2183: Uncharacteri 24.0 2.9E+02 0.0063 21.0 5.8 43 55-106 52-94 (100)
159 TIGR01201 HU_rel DNA-binding p 23.5 1.2E+02 0.0026 24.7 3.9 31 2-32 32-62 (145)
160 smart00411 BHL bacterial (prok 23.5 1.7E+02 0.0036 21.2 4.4 34 1-34 1-34 (90)
161 PF06490 FleQ: Flagellar regul 22.7 1.6E+02 0.0034 22.6 4.2 64 44-114 1-81 (109)
162 TIGR03395 sphingomy sphingomye 22.6 1.7E+02 0.0037 26.6 5.1 35 67-102 174-208 (283)
163 PF06180 CbiK: Cobalt chelatas 22.3 2.1E+02 0.0046 25.9 5.6 10 55-64 159-168 (262)
164 cd01533 4RHOD_Repeat_2 Member 22.3 3.2E+02 0.007 20.2 6.0 93 7-109 3-100 (109)
165 COG0148 Eno Enolase [Carbohydr 22.0 4.9E+02 0.011 25.2 8.0 94 15-113 168-288 (423)
166 PRK11929 putative bifunctional 21.5 3.5E+02 0.0075 29.1 7.9 71 42-112 833-905 (958)
167 PF02885 Glycos_trans_3N: Glyc 21.0 1.5E+02 0.0032 20.5 3.4 26 3-28 2-27 (66)
168 PF09892 DUF2119: Uncharacteri 20.2 1.6E+02 0.0035 25.4 4.0 38 46-84 10-50 (193)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-83 Score=550.32 Aligned_cols=285 Identities=62% Similarity=1.181 Sum_probs=281.7
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCee
Q 022658 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v 80 (294)
.|+++.||++++.+.++++++..||.+++++|.+||++..++.|+.|+|||||++.||..+|+..|.++.++|+||||||
T Consensus 1 ~dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyV 80 (303)
T KOG0372|consen 1 SDLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYV 80 (303)
T ss_pred CcHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEec
Q 022658 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (294)
Q Consensus 81 DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vH 160 (294)
|||.+|+|++.+|+.||.+||+++.+||||||.+.+++.|||++||.++||+..+|+.+.+.|++||++|+|++++||||
T Consensus 81 DRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVH 160 (303)
T KOG0372|consen 81 DRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVH 160 (303)
T ss_pred ccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecC
Q 022658 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (294)
Q Consensus 161 gGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G 240 (294)
||++|.+++++||+.+.|..++|+++.++|+|||||.+.++|..+|||.|+.||.+++++|++.||+++|+|+||.+.+|
T Consensus 161 GGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eG 240 (303)
T KOG0372|consen 161 GGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEG 240 (303)
T ss_pred CCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 241 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 241 ~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
|++.| +++++|||||||||+.++|.||||+|+++....|+.|++.
T Consensus 241 yk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa 285 (303)
T KOG0372|consen 241 YKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAA 285 (303)
T ss_pred HHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecc
Confidence 99999 9999999999999999999999999999999999999986
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2e-76 Score=500.92 Aligned_cols=285 Identities=80% Similarity=1.383 Sum_probs=280.9
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCee
Q 022658 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v 80 (294)
+|+++||+.++..+.++++++..||+-++++|..|.++.+++.|+.|.|||||++.+|.++++..|..|+++|||+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEec
Q 022658 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (294)
Q Consensus 81 DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vH 160 (294)
|||.+|+|+..+|+.||.+||.++.+||||||.+.+.+.|||++||..+||+...|+.+.+.|+.|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecC
Q 022658 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (294)
Q Consensus 161 gGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G 240 (294)
||+||+..+++||+.+.|..++|.++..+|++||||++.+.|..+|||.|++||++.+.+|...|++++|-|+||.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecCCe-EEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 241 LKYMFQDKG-LVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 241 ~~~~~~~~~-~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
|++.| ++| ++|||||||||++++|.||||.++++++.+++.|.+.
T Consensus 244 ~KymF-~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~av 289 (306)
T KOG0373|consen 244 FKYMF-DEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAV 289 (306)
T ss_pred HHhcc-CCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeec
Confidence 99999 776 9999999999999999999999999999999999876
No 3
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.6e-74 Score=522.64 Aligned_cols=284 Identities=67% Similarity=1.234 Sum_probs=276.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeec
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 81 (294)
+++++++++.++..++++++.+||++|++++++||++++++.|++|+|||||++.+|.++|+..+.++.+++||||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecC
Q 022658 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (294)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHg 161 (294)
||++|+|++.++++++..+|.++++||||||.+.++..|||..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCe
Q 022658 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 241 (294)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~ 241 (294)
||+|...++++++.++|+.+.+.++++.|++||||.+..+|.+++||.|+.||++++++||++|++++||||||++++||
T Consensus 161 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 240 (285)
T cd07415 161 GLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGY 240 (285)
T ss_pred CCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceE
Confidence 99999999999999999999888899999999999988899999999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 242 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 242 ~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
+..+ +++++||||||+||+..+|+||+|.|+++.+++|++|++.
T Consensus 241 ~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~ 284 (285)
T cd07415 241 QWMF-DDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAA 284 (285)
T ss_pred EEec-CCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccC
Confidence 9998 9999999999999999999999999999999999999864
No 4
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=7e-74 Score=523.67 Aligned_cols=286 Identities=66% Similarity=1.189 Sum_probs=276.0
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCee
Q 022658 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v 80 (294)
+|++++|+++++++.++++++.+||++|++++++||++++++.|++|+|||||++.+|.++++..+.++.++++||||||
T Consensus 1 ~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyV 80 (303)
T PTZ00239 1 MDIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFV 80 (303)
T ss_pred CCHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEec
Q 022658 81 DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVH 160 (294)
Q Consensus 81 DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vH 160 (294)
|||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|..+.++|++||++++++++++|||
T Consensus 81 DRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvH 160 (303)
T PTZ00239 81 DRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVH 160 (303)
T ss_pred CCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEc
Confidence 99999999999999999999999999999999999999999999999999877889999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecC
Q 022658 161 GGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (294)
Q Consensus 161 gGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G 240 (294)
|||+|...++++++.++|+.+.|.++++.|++||||.+..+|.+++||.|+.||++++++||++|++++||||||++++|
T Consensus 161 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G 240 (303)
T PTZ00239 161 GGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEG 240 (303)
T ss_pred CccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccc
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred eeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 241 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 241 ~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
|+..+.+++++||||||+||+..+|+||+|.++++.+++|++|++.
T Consensus 241 ~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~ 286 (303)
T PTZ00239 241 YKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEV 286 (303)
T ss_pred eEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCC
Confidence 9988734559999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.8e-73 Score=522.11 Aligned_cols=280 Identities=33% Similarity=0.576 Sum_probs=258.7
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCC----CccEeecCCCCHHHHHHHHHhCCCCC-CceEEEe
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNS----PVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFM 76 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~----~i~viGDiHG~~~~l~~ll~~~~~~~-~~~~vfL 76 (294)
+++++|+++.+++.++++++.+||++|+++|++||++++++. |++|||||||++.+|.++|+..|.++ .++++||
T Consensus 6 ~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFL 85 (321)
T cd07420 6 HIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFN 85 (321)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEe
Confidence 478999999999999999999999999999999999999875 89999999999999999999999875 4789999
Q ss_pred CCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcC--cchhhhhhhhhcccceeEEEec
Q 022658 77 GDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDG 154 (294)
Q Consensus 77 GD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~~~LP~~~~i~~ 154 (294)
|||||||++|+||+.+|++||..+|+++++||||||.+.++..|||..|+..+|+. ..+|..+.++|++||++|++++
T Consensus 86 GDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~ 165 (321)
T cd07420 86 GDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDN 165 (321)
T ss_pred ccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcC
Confidence 99999999999999999999999999999999999999999999999999999984 5799999999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHHHhhhccCC-----CCC----------------------CCCccccccCCCCCCCC-CccCC
Q 022658 155 TVLCVHGGLSPDIRTIDQIRVIERNCE-----IPH----------------------EGPFCDLMWSDPEDIET-WAVSP 206 (294)
Q Consensus 155 ~~l~vHgGi~~~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~~llWsdp~~~~~-~~~~~ 206 (294)
+++||||||++ ..++++++.++|+.. +|. ..++.|+|||||.+..+ |.+++
T Consensus 166 ~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~ 244 (321)
T cd07420 166 KILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKPNTF 244 (321)
T ss_pred CEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCccCC
Confidence 99999999997 568999999988421 111 03567999999997555 66778
Q ss_pred CCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEE
Q 022658 207 RGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACW 283 (294)
Q Consensus 207 rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~ 283 (294)
||.|+.||++++++||++|++++||||||++++||++.+ +++++||||||+||+..+|+||+|.|+++.+++|.+|
T Consensus 245 RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~ 320 (321)
T cd07420 245 RGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQY 320 (321)
T ss_pred CCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEe
Confidence 999999999999999999999999999999999999988 9999999999999999999999999999999999887
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.6e-72 Score=516.36 Aligned_cols=284 Identities=41% Similarity=0.879 Sum_probs=272.4
Q ss_pred CCHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCce
Q 022658 1 MDLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETN 72 (294)
Q Consensus 1 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~ 72 (294)
.+++++|+++.+.. .++++++.+||++|++++++||++++++.+++|+|||||++.+|.++|+..++++.++
T Consensus 9 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ 88 (320)
T PTZ00480 9 IDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESN 88 (320)
T ss_pred cCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcce
Confidence 36889999998654 6999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEE
Q 022658 73 YIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII 152 (294)
Q Consensus 73 ~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i 152 (294)
+||||||||||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+. .+|..+.++|++||++|++
T Consensus 89 ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~-~l~~~~~~~F~~LPlaAiI 167 (320)
T PTZ00480 89 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTI-KLWKTFTDCFNCLPVAALI 167 (320)
T ss_pred EEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCH-HHHHHHHHHHHhccHhhee
Confidence 999999999999999999999999999999999999999999999999999999999964 7999999999999999999
Q ss_pred eceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC-CCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Q 022658 153 DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVC 231 (294)
Q Consensus 153 ~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~iv 231 (294)
+++++||||||+|...++++++.++||.+.+.++++.|+|||||.+ ..+|.+++||.|+.||++++++||++|++++||
T Consensus 168 ~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~Ii 247 (320)
T PTZ00480 168 DEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLIC 247 (320)
T ss_pred cCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEE
Confidence 9999999999999999999999999999999999999999999985 689999999999999999999999999999999
Q ss_pred eccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 232 RAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 232 rgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
||||++++||++.+ +++|+||||||+||+..+|+||+|.|++++.++|++|++.
T Consensus 248 R~Hq~v~~G~~~~~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~ 301 (320)
T PTZ00480 248 RAHQVVEDGYEFFS-KRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPA 301 (320)
T ss_pred EcCccccCceEEeC-CCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCC
Confidence 99999999999988 9999999999999999999999999999999999999865
No 7
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=8.2e-72 Score=508.99 Aligned_cols=283 Identities=43% Similarity=0.899 Sum_probs=270.8
Q ss_pred CHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceE
Q 022658 2 DLDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNY 73 (294)
Q Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~ 73 (294)
+++++|+++.+.. .++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.+++
T Consensus 1 ~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~ 80 (293)
T cd07414 1 DIDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 80 (293)
T ss_pred CHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceE
Confidence 5788899888655 69999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEe
Q 022658 74 IFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIID 153 (294)
Q Consensus 74 vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~ 153 (294)
||||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..|+..+|+. .+|..+.++|++||++++++
T Consensus 81 lfLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~-~l~~~~~~~f~~lPlaa~i~ 159 (293)
T cd07414 81 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI-KLWKTFTDCFNCLPVAAIID 159 (293)
T ss_pred EEEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhH-HHHHHHHHHHHHhHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999964 78999999999999999999
Q ss_pred ceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC-CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEe
Q 022658 154 GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCR 232 (294)
Q Consensus 154 ~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivr 232 (294)
++++|||||++|...++++++.++|+.+.+..+.+.+++||||.. ..+|.+++||.|+.||.+++++||++||+++|||
T Consensus 160 ~~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 239 (293)
T cd07414 160 EKIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICR 239 (293)
T ss_pred CcEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEE
Confidence 999999999999999999999999999888889999999999984 6889999999999999999999999999999999
Q ss_pred ccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 233 AHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 233 gH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
|||++++||++.+ +++++||||||+||+..+|+||+|.|+++..++|++|++.
T Consensus 240 ~He~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 240 AHQVVEDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CCccccCeEEEeC-CCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999988 9999999999999999999999999999999999999764
No 8
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.4e-71 Score=505.36 Aligned_cols=281 Identities=37% Similarity=0.782 Sum_probs=267.1
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEE
Q 022658 3 LDQWIAKVKEGQ--------HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYI 74 (294)
Q Consensus 3 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~v 74 (294)
++++|+++.+.. .++++++.+||++|++++++||++++++.|++|+||||||+.+|.++|+..++++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 466677775533 688999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEec
Q 022658 75 FMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDG 154 (294)
Q Consensus 75 fLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~ 154 (294)
|||||||||++|.|++.+++++|..+|.+++++|||||.+.++..|||..++..+|+. .+|..+.++|++||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~-~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNI-KLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhH-HHHHHHHHHHHhCchheEecC
Confidence 9999999999999999999999999999999999999999999999999999999974 789999999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC-CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEec
Q 022658 155 TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRA 233 (294)
Q Consensus 155 ~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrg 233 (294)
+++|||||++|...++++++.++|+.+.+.++++.|++||||.+ ..+|.+++||.|+.||++++++||++|++++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999988889999999999985 68999999999999999999999999999999999
Q ss_pred cceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEec
Q 022658 234 HQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHA 285 (294)
Q Consensus 234 H~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 285 (294)
||++++||++.+ +++++||||||+||+..+|+||+|.|+++.+++|++|.+
T Consensus 243 Hq~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFA-SRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcC-CCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999988 999999999999999999999999999999999999876
No 9
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=4.7e-71 Score=508.15 Aligned_cols=284 Identities=38% Similarity=0.654 Sum_probs=269.0
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC----ccEeecCCCCHHHHHHHHHhCCCCCC-ceEEEeC
Q 022658 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP----VTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMG 77 (294)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~----i~viGDiHG~~~~l~~ll~~~~~~~~-~~~vfLG 77 (294)
+++++++++++..++++++.+||++|++++++||++++++.| ++||||||||+.+|.++|+..++++. ++++|||
T Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLG 95 (316)
T cd07417 16 VKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 95 (316)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEe
Confidence 789999999999999999999999999999999999998755 99999999999999999999998754 5799999
Q ss_pred CeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEE
Q 022658 78 DFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (294)
Q Consensus 78 D~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l 157 (294)
||||||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+. .+|..+.++|++||++++++++++
T Consensus 96 DyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~-~l~~~~~~~f~~LPlaaii~~~~~ 174 (316)
T cd07417 96 DFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNE-QMFDLFSEVFNWLPLAHLINGKVL 174 (316)
T ss_pred eEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccH-HHHHHHHHHHHhchHhheeCCeEE
Confidence 9999999999999999999999999999999999999999999999999999964 789999999999999999999999
Q ss_pred EecCCC-CCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccce
Q 022658 158 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (294)
Q Consensus 158 ~vHgGi-~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~ 236 (294)
|||||+ ++...++++++.++|+.+.+.++++.|+|||||.+..+|.+++||.|+.||++++++||++|++++||||||+
T Consensus 175 ~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~ 254 (316)
T cd07417 175 VVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEV 254 (316)
T ss_pred EEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEECCcc
Confidence 999999 4567889999999999888888899999999999888999999999999999999999999999999999999
Q ss_pred eecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcC-CCceeEEEEecCce
Q 022658 237 VQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNE-NMVRYPACWHAGVC 288 (294)
Q Consensus 237 ~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~ 288 (294)
+++||+..+ +++++||||||+||+..+|+||+|.|++ +++++|++|++...
T Consensus 255 ~~~G~~~~~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~ 306 (316)
T cd07417 255 KDEGYEVEH-DGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPH 306 (316)
T ss_pred cceeEEEec-CCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCC
Confidence 999999988 9999999999999999999999999999 89999999998743
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.5e-70 Score=503.65 Aligned_cols=284 Identities=40% Similarity=0.719 Sum_probs=268.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeec
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 81 (294)
+++-++|++++++.++++++.+||++|++++++||++++++.|++||||||||+.+|.++|+..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecC
Q 022658 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (294)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHg 161 (294)
||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+ ..+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999999999999999996 47899999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCC-------CCccC-CCCCccccCHHHHHHHHHhCCCcEEEec
Q 022658 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIE-------TWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRA 233 (294)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~-------~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~ivrg 233 (294)
|++|...++++++.++|+.+.+..+++.|+|||||.+.. +|.++ +||.++.||++++++||++|++++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999988888999999999997422 47665 8999999999999999999999999999
Q ss_pred cceeecCeeEEecCC------eEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecCce
Q 022658 234 HQLVQEGLKYMFQDK------GLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAGVC 288 (294)
Q Consensus 234 H~~~~~G~~~~~~~~------~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~ 288 (294)
||++++||++.+ ++ +++||||||+||+..+|+||+|.|+++ ..+|.+|.+..-
T Consensus 241 He~~~~G~~~~~-~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~ 299 (305)
T cd07416 241 HEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 299 (305)
T ss_pred ccccccceEEec-CCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCC
Confidence 999999999987 65 899999999999999999999999987 479999998743
No 11
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=4.6e-71 Score=508.36 Aligned_cols=271 Identities=43% Similarity=0.897 Sum_probs=264.4
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCC-CCCCceEEEeCCeecCCCCcHHHHHHH
Q 022658 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLEVFTIL 93 (294)
Q Consensus 15 ~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~evl~~l 93 (294)
.++++++.+||..+.+++.++|+++++++||.|+|||||++.+|.+++...| +|+..+|+|||||||||++|+|++.+|
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4899999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHH
Q 022658 94 LLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQI 173 (294)
Q Consensus 94 ~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i 173 (294)
+++|++||+++++||||||.+.++..|||++||.++|+...+|..+++.|.+||++++|++|++|+|||++|...+++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999998668999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCCccccccCCCCC-CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEE
Q 022658 174 RVIERNCEIPHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVT 252 (294)
Q Consensus 174 ~~i~r~~~~~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~it 252 (294)
+.|.||.+.++.+++.|++|+||.. ..+|.+|.||.++.||++++++||+++++++|+||||++++||+++. +++++|
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa-~r~lvT 269 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFA-GRKLVT 269 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEec-CceEEE
Confidence 9999999999999999999999995 69999999999999999999999999999999999999999999977 999999
Q ss_pred EEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 253 VWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 253 vfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
|||||+||+.+.|.||+|.+|+++.++|.++.++
T Consensus 270 IFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 270 IFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 9999999999999999999999999999999984
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.3e-70 Score=492.27 Aligned_cols=270 Identities=48% Similarity=0.903 Sum_probs=259.9
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHH
Q 022658 16 LLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLL 95 (294)
Q Consensus 16 ~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 95 (294)
++++++.+||++|++++++||+++++++|++||||||||+.+|.++|+..+.++.++++|||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHh
Q 022658 96 LKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRV 175 (294)
Q Consensus 96 l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~ 175 (294)
++..+|.++++||||||.+.++..|||..|+..+|+. .+|+.+.++|++||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~-~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGE-EIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCH-HHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 9999999999999999999999999999999999974 899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCCccccccCCCC-CCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEE
Q 022658 176 IERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVW 254 (294)
Q Consensus 176 i~r~~~~~~~~~~~~llWsdp~-~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvf 254 (294)
++|+.+.+.+..+.+++||||. ...+|.+++||.++.||++++++||++|++++||||||++++||+..+ +++++|||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~Tvf 238 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFH-DRKLVTIF 238 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEec-CCcEEEEE
Confidence 9999988888899999999996 578999999999999999999999999999999999999999999998 99999999
Q ss_pred cCCCCCccCCCcEEEEEEcCCCceeEEEEecCc
Q 022658 255 SAPNYCYRCGNVASILSFNENMVRYPACWHAGV 287 (294)
Q Consensus 255 Sa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 287 (294)
|||+||+..+|+||+|.|+++.+++|.+|++++
T Consensus 239 Sa~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~~ 271 (271)
T smart00156 239 SAPNYCGRFGNKAAVLKVDKDLKLSFEQFKPGK 271 (271)
T ss_pred CCcccccCCCceEEEEEECCCCcEEEEEecCCC
Confidence 999999988999999999999999999998753
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=6.7e-67 Score=486.73 Aligned_cols=284 Identities=34% Similarity=0.551 Sum_probs=257.2
Q ss_pred HHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhCCCC
Q 022658 3 LDQWIAKVKEG----------QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHV 68 (294)
Q Consensus 3 ~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~i~~~ep~~l~~~----~~i~viGDiHG~~~~l~~ll~~~~~~ 68 (294)
+++||+.++++ +.++++++.+||++|+++|++||++++++ .|++|||||||++.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 67889988776 56889999999999999999999999997 79999999999999999999999987
Q ss_pred CC-ceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcC--cchhhhhhhhhcc
Q 022658 69 PE-TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDY 145 (294)
Q Consensus 69 ~~-~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~~~ 145 (294)
+. +++||||||||||++|+|++.++++++..+|.++++||||||.+.++..+||..|+..+|+. ..+|+.+.++|++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 65 56999999999999999999999999999999999999999999999999999999999976 3689999999999
Q ss_pred cceeEEEeceEEEecCCCC---------------------------CCCCCHHHHHhhhccC-CCCCCC---CccccccC
Q 022658 146 LTLSAIIDGTVLCVHGGLS---------------------------PDIRTIDQIRVIERNC-EIPHEG---PFCDLMWS 194 (294)
Q Consensus 146 LP~~~~i~~~~l~vHgGi~---------------------------~~~~~~~~i~~i~r~~-~~~~~~---~~~~llWs 194 (294)
||++++++++++||||||+ |.+.++++|+.++|+. +++..+ ++.|+|||
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~dlLWS 251 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGDVLWS 251 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccceeeEee
Confidence 9999999999999999994 4456889999999974 454443 46899999
Q ss_pred CCCCCCCCccC-CCCCccccCHHHHHHHHHhCCCcEEEeccce------------eecCeeEEecC---CeEEEEEcCCC
Q 022658 195 DPEDIETWAVS-PRGAGWLFGSRVTSEFNHINNLDLVCRAHQL------------VQEGLKYMFQD---KGLVTVWSAPN 258 (294)
Q Consensus 195 dp~~~~~~~~~-~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~------------~~~G~~~~~~~---~~~itvfSa~~ 258 (294)
||.+..+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.+ + ++++||||||+
T Consensus 252 DP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~-~~~~~~liTvFSa~n 330 (377)
T cd07418 252 DPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH-DVESGKLITLFSAPD 330 (377)
T ss_pred CCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec-cCCCCcEEEEecCCc
Confidence 99988888776 7999999999999999999999999999996 679999987 6 99999999999
Q ss_pred CC------ccCCCcEEEEEEcCC--CceeEEEEecCc
Q 022658 259 YC------YRCGNVASILSFNEN--MVRYPACWHAGV 287 (294)
Q Consensus 259 y~------~~~~n~~avl~i~~~--~~~~~~~~~~~~ 287 (294)
|| +..+|+||++.++.+ .+.+|++|++.+
T Consensus 331 Y~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~ 367 (377)
T cd07418 331 YPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVK 367 (377)
T ss_pred cccccccccccCcceEEEEEecCCCCCccceEeeccC
Confidence 99 578999999998665 479999999874
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.1e-67 Score=481.07 Aligned_cols=272 Identities=37% Similarity=0.717 Sum_probs=253.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCC--------ceEEEeCCeecCCC
Q 022658 13 GQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPE--------TNYIFMGDFVDRGY 84 (294)
Q Consensus 13 ~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~--------~~~vfLGD~vDrG~ 84 (294)
+..++++++.+||++|++++++||++++++++++||||||||+++|.++|+..+.++. .++|||||||||||
T Consensus 18 ~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp 97 (311)
T cd07419 18 RFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGS 97 (311)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCC
Confidence 4568999999999999999999999999999999999999999999999999988754 57999999999999
Q ss_pred CcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcC-----cchhhhhhhhhcccceeEEEeceEEEe
Q 022658 85 NSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN-----ANAWRYCTDVFDYLTLSAIIDGTVLCV 159 (294)
Q Consensus 85 ~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~-----~~~~~~~~~~~~~LP~~~~i~~~~l~v 159 (294)
+|+|++.++++|+..+|.++++||||||.+.++..+||..++..+|+. ...|..+.++|++||++++++++++||
T Consensus 98 ~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~v 177 (311)
T cd07419 98 NSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCM 177 (311)
T ss_pred ChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEE
Confidence 999999999999999999999999999999999999999999988875 358899999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHhhhccC-CCCCCCCccccccCCCCC---CCCCccCC---CCCc--cccCHHHHHHHHHhCCCcEE
Q 022658 160 HGGLSPDIRTIDQIRVIERNC-EIPHEGPFCDLMWSDPED---IETWAVSP---RGAG--WLFGSRVTSEFNHINNLDLV 230 (294)
Q Consensus 160 HgGi~~~~~~~~~i~~i~r~~-~~~~~~~~~~llWsdp~~---~~~~~~~~---rg~~--~~fg~~~~~~fl~~~~~~~i 230 (294)
|||++|...++++++.+.|+. ..+.+..+.+++||||.+ ..+|.+++ ||.| +.||++++++||++||+++|
T Consensus 178 HgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~i 257 (311)
T cd07419 178 HGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMI 257 (311)
T ss_pred ccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEE
Confidence 999999999999999999997 445567889999999995 35677766 9988 79999999999999999999
Q ss_pred EeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEec
Q 022658 231 CRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHA 285 (294)
Q Consensus 231 vrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 285 (294)
|||||++++||+..+ +++++||||||+||+..+|+||++.|+++.+++++++++
T Consensus 258 iRgHe~~~~G~~~~~-~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 258 IRAHECVMDGFERFA-QGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EEechhhhCCeEEeC-CCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 999999999999988 999999999999999999999999999999999999874
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-65 Score=443.30 Aligned_cols=284 Identities=57% Similarity=1.079 Sum_probs=278.4
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeec
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 81 (294)
+++.+|+.+....++++.++..+|+.|+++|+++.++.++..|++|+||+||++++|.++++.-|..++..++|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 57889999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecC
Q 022658 82 RGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (294)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHg 161 (294)
||++|.|++.+|.++|.+||++|.+||||||.+.+.+.|||++||+++||+..+|..+.+.|+++|+.+.|+++++|+||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCe
Q 022658 162 GLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGL 241 (294)
Q Consensus 162 Gi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~ 241 (294)
|++|.+..+++++.+.|..++|.++.++|+|||||++.-+|..+|||.++.||.+-.++|-.+||+++|-|+||.+.+||
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~ 258 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGY 258 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 242 KYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 242 ~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
.+.. ...++|+|||||||+.++|.+|++.++++...+|.||+++
T Consensus 259 nW~~-~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~ps 302 (319)
T KOG0371|consen 259 NWYH-LWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPS 302 (319)
T ss_pred ceee-ecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCC
Confidence 9998 8888899999999999999999999999999999999986
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.5e-63 Score=443.56 Aligned_cols=282 Identities=41% Similarity=0.711 Sum_probs=264.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecC
Q 022658 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDR 82 (294)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDr 82 (294)
.+.+.+++..-+.++++..+.|+.++..+|++|++++++++||.|+|||||+|.||.++++..|.|..++|+||||||||
T Consensus 48 ~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDR 127 (517)
T KOG0375|consen 48 HDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 127 (517)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccccc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCC
Q 022658 83 GYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGG 162 (294)
Q Consensus 83 G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgG 162 (294)
|..|+||+.+|++||+.||..+++||||||.+.+...+-|..||..+|.. .+|+...+.|+.||+||+.+.+++|||||
T Consensus 128 GyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse-~vYdaCmesFd~LPLAAlmNqQflCVHGG 206 (517)
T KOG0375|consen 128 GYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE-RVYDACMESFDCLPLAALMNQQFLCVHGG 206 (517)
T ss_pred ceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccH-HHHHHHHHHhccchHHHHhcCceEEecCC
Confidence 99999999999999999999999999999999999999999999999965 89999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC-------CCCCcc-CCCCCccccCHHHHHHHHHhCCCcEEEecc
Q 022658 163 LSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-------IETWAV-SPRGAGWLFGSRVTSEFNHINNLDLVCRAH 234 (294)
Q Consensus 163 i~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~-------~~~~~~-~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH 234 (294)
++|.+.++++|++++|..++|.-++++|+||+||.+ .+.|.. +.||++|.|...++.+||+.||+--|||+|
T Consensus 207 lSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAH 286 (517)
T KOG0375|consen 207 LSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAH 286 (517)
T ss_pred CCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhh
Confidence 999999999999999999999999999999999983 233443 579999999999999999999999999999
Q ss_pred ceeecCeeEEe-----cCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecC
Q 022658 235 QLVQEGLKYMF-----QDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAG 286 (294)
Q Consensus 235 ~~~~~G~~~~~-----~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 286 (294)
+.++.||+.+. +-..+|||||||||.+..+|+||||+-. +....++||+-+
T Consensus 287 EAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYE-nNVMNIRQFncS 342 (517)
T KOG0375|consen 287 EAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYE-NNVMNIRQFNCS 342 (517)
T ss_pred hhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhh-cccceeeccCCC
Confidence 99999999865 2235899999999999999999999876 668889999754
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-56 Score=410.76 Aligned_cols=288 Identities=32% Similarity=0.561 Sum_probs=261.7
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhCCCCCC-ceEEEe
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFM 76 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~~-~~~vfL 76 (294)
+|+.|||.|+..+.+++..+..|+.+|+++|++.|++-+++ ..+.|+||+||.+++|.-+|.+.|+|.. ..|||.
T Consensus 120 ~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFN 199 (631)
T KOG0377|consen 120 HIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFN 199 (631)
T ss_pred HHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeec
Confidence 48999999999999999999999999999999999998874 5799999999999999999999999865 679999
Q ss_pred CCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcC--cchhhhhhhhhcccceeEEEec
Q 022658 77 GDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGN--ANAWRYCTDVFDYLTLSAIIDG 154 (294)
Q Consensus 77 GD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~~~~LP~~~~i~~ 154 (294)
||+||||.+|+|+|.+|+++...||..+++-|||||..++|-.|||..|...+|.. ..+...+.++|+|||++.+++.
T Consensus 200 GDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~ 279 (631)
T KOG0377|consen 200 GDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDS 279 (631)
T ss_pred CchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhccc
Confidence 99999999999999999999999999999999999999999999999999999964 4677889999999999999999
Q ss_pred eEEEecCCCCCCCCCHHHHHhhhccCC-----CCC---------C--------CCccccccCCCCCCCCCccC-CCCCcc
Q 022658 155 TVLCVHGGLSPDIRTIDQIRVIERNCE-----IPH---------E--------GPFCDLMWSDPEDIETWAVS-PRGAGW 211 (294)
Q Consensus 155 ~~l~vHgGi~~~~~~~~~i~~i~r~~~-----~~~---------~--------~~~~~llWsdp~~~~~~~~~-~rg~~~ 211 (294)
+++.|||||+.. ++++-+.+|+|... +|- + .-+.|++||||....+..|| -||.|.
T Consensus 280 ~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~ 358 (631)
T KOG0377|consen 280 RILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGC 358 (631)
T ss_pred ceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcc
Confidence 999999999754 67777777776431 111 0 01458999999988777766 699999
Q ss_pred ccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCCCceeEEEEecCceeee
Q 022658 212 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVRYPACWHAGVCVCV 291 (294)
Q Consensus 212 ~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~ 291 (294)
+||++.+.+||++++++++||+|++.|+||++++ |++++|||||+||....+|+||++++.....+.|.||.+++.||.
T Consensus 359 yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H-d~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t~~ 437 (631)
T KOG0377|consen 359 YFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH-DNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQTKR 437 (631)
T ss_pred eeCchHHHHHHHHhCceeeeeecccCCCcceeee-CCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhhhh
Confidence 9999999999999999999999999999999999 999999999999998889999999999999999999999998885
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.4e-48 Score=361.83 Aligned_cols=284 Identities=37% Similarity=0.648 Sum_probs=264.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhCCCCCC-ceEEEeC
Q 022658 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVPE-TNYIFMG 77 (294)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~~-~~~vfLG 77 (294)
+..+++.+.++..++...+-+|+..+.+++.++|++++++ .++.+.||.||++.++.++++..|.++. ..++|.|
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 5566777788899999999999999999999999998875 4589999999999999999999999865 6899999
Q ss_pred CeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEE
Q 022658 78 DFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (294)
Q Consensus 78 D~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l 157 (294)
|++|||..|.|+...+...+..+|+++|++|||||...+++.|||..++..+|+. +.+..+.+.|.+||++..++++++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte-~~~~~f~~~f~~LPl~~~i~~~~~ 328 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE-EMFNLFSEVFIWLPLAHLINNKVL 328 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH-HHHHhhhhhhccccchhhhcCceE
Confidence 9999999999999999999999999999999999999999999999999999976 445555699999999999999999
Q ss_pred EecCCCC-CCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccce
Q 022658 158 CVHGGLS-PDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (294)
Q Consensus 158 ~vHgGi~-~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~ 236 (294)
.+|||+. +.-..++++++|.|+..+++++.+++++|+||...++..++.||.|..||.+++.+||+.++++.|||||+.
T Consensus 329 ~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~ 408 (476)
T KOG0376|consen 329 VMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEV 408 (476)
T ss_pred EEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhhcccc
Confidence 9999985 444679999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred eecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEc-CCCceeEEEEecCce
Q 022658 237 VQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFN-ENMVRYPACWHAGVC 288 (294)
Q Consensus 237 ~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~ 288 (294)
.+.||+..+ +|+|+|||||||||...+|+||++.++ ++.+..+++|++...
T Consensus 409 ~d~gy~~eh-~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~ 460 (476)
T KOG0376|consen 409 KDEGYEVEH-SGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPH 460 (476)
T ss_pred CCCceeeec-CCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCC
Confidence 999999999 999999999999999999999999999 779999999998743
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=2.7e-36 Score=265.60 Aligned_cols=214 Identities=44% Similarity=0.733 Sum_probs=174.5
Q ss_pred cEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHH
Q 022658 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e 125 (294)
+|||||||++++|.++++.++..+.+++|||||++|||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988999999999999999999999999999877 8889999999999988776665433
Q ss_pred H--------HHHhcCcchhhhhhhhhcccceeEEEec-eEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCC
Q 022658 126 C--------QRKYGNANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDP 196 (294)
Q Consensus 126 ~--------~~~~~~~~~~~~~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp 196 (294)
. ...+.....+....+++..||++..++. +++|||||++|......+.. ..+.+....+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 1223334567778899999999998875 89999999999887555443 2233455789999998
Q ss_pred CCCCC-CccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEE
Q 022658 197 EDIET-WAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILS 271 (294)
Q Consensus 197 ~~~~~-~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~ 271 (294)
..... ...++++. |+++...|+..++.+.|||||+++..|+.... +++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~-~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGH-DGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcC-CCCEEEEecCCcccCCCCccEEEEe
Confidence 75433 22333333 89999999999999999999999999987555 8889999999999877677777653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=8e-28 Score=215.24 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=133.1
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC---------CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV---------PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
++++||||||||++.|.++|+++++. ..+++|||||||||||+|.+|+++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998873 46899999999999999999999999885 34579999999999
Q ss_pred hhhhhhcC-------ChHHHHHHhcC------cchhhhhhhhhcccceeEEE-eceEEEecCCCCCCCCC--HHHHHhhh
Q 022658 114 RQLTQVYG-------FYDECQRKYGN------ANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIRT--IDQIRVIE 177 (294)
Q Consensus 114 ~~~~~~~g-------f~~e~~~~~~~------~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~~~--~~~i~~i~ 177 (294)
++++...+ ...++..+|.. ..+.+.+.+++++||++..+ .++++|||||++|.... .+++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 98765432 12334444532 13456788899999999876 36799999999876411 1111
Q ss_pred ccCCCCCCCCccccccCCCCC---------CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCC
Q 022658 178 RNCEIPHEGPFCDLMWSDPED---------IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDK 248 (294)
Q Consensus 178 r~~~~~~~~~~~~llWsdp~~---------~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~ 248 (294)
...++|++-.. ...|..+. .+.+.+|.||+|+.... . .+
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~---~-~~ 202 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPR---F-VN 202 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccce---e-cC
Confidence 12334442110 01222211 24457999999987533 2 34
Q ss_pred eEEEEEcCCCCCccCCCcEEEEEEcCCC
Q 022658 249 GLVTVWSAPNYCYRCGNVASILSFNENM 276 (294)
Q Consensus 249 ~~itvfSa~~y~~~~~n~~avl~i~~~~ 276 (294)
..+-|.+..-| ++.=+++.+++..
T Consensus 203 ~~i~IDtGa~~----gG~Ltal~l~~~~ 226 (245)
T PRK13625 203 HTVNIDTGCVF----GGRLTALRYPEME 226 (245)
T ss_pred CeEEEECcCcc----CCEEEEEECCCCc
Confidence 57788887655 3355667777554
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=4.7e-28 Score=211.62 Aligned_cols=177 Identities=18% Similarity=0.283 Sum_probs=130.0
Q ss_pred cEeecCCCCHHHHHHHHHhCCC--------CCCceEEEeCCeecCCCCcHHHHHHHHHhhhh---CCCcEEEeCCCCchh
Q 022658 46 TVCGDIHGQFHDLMKLFQTGGH--------VPETNYIFMGDFVDRGYNSLEVFTILLLLKAR---YPANITLLRGNHESR 114 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~---~p~~v~~lrGNHE~~ 114 (294)
+||||||||+++|.++|+.+++ .+.+.++++||+|||||++.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35789999999999999999999999999754 346799999999999
Q ss_pred hhhhhcCChH-HHHHHhc-----Ccch---hhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCC
Q 022658 115 QLTQVYGFYD-ECQRKYG-----NANA---WRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHE 185 (294)
Q Consensus 115 ~~~~~~gf~~-e~~~~~~-----~~~~---~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~ 185 (294)
.+...+.+.. ....... .... -..+.+|++.+|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875443221 1111110 1111 234578999999998865 59999999822
Q ss_pred CCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCC
Q 022658 186 GPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 257 (294)
Q Consensus 186 ~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~ 257 (294)
+|+|. .+.+... ..-+...+.++++.++.++||+|||+++.|....+ +|++++|.++.
T Consensus 140 ------~w~r~----y~~~~~~---~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~-~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRG----YSKETSD---KECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFC-GGKVIRIDVGM 197 (208)
T ss_pred ------HHhhH----hhhhhhh---ccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEE-CCEEEEEeCCc
Confidence 34331 0000000 00012467889999999999999999998876567 99999999744
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.94 E-value=2.6e-26 Score=204.10 Aligned_cols=201 Identities=19% Similarity=0.331 Sum_probs=131.1
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCCC----------CceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCc
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHVP----------ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 112 (294)
+|+.||||||||+++|.++|+++++.+ .++++||||||||||+|.+|+++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997653 469999999999999999999999998643 46999999999
Q ss_pred hhhhhhhcCC-------hHHHHHHhc--CcchhhhhhhhhcccceeEEEe-ceEEEecCCCCCCCCCHHHHHhhhccCCC
Q 022658 113 SRQLTQVYGF-------YDECQRKYG--NANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIRTIDQIRVIERNCEI 182 (294)
Q Consensus 113 ~~~~~~~~gf-------~~e~~~~~~--~~~~~~~~~~~~~~LP~~~~i~-~~~l~vHgGi~~~~~~~~~i~~i~r~~~~ 182 (294)
.++++...+. ..++...+. .....+...++|+.||+...++ ++++|||||+++.......
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~---------- 148 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS---------- 148 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc----------
Confidence 9987653321 122333332 2245567889999999988764 5799999998764321110
Q ss_pred CCCCCccccccCCCCC-CCCCccCCCCCccccCHHHHHHHH-HhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCC
Q 022658 183 PHEGPFCDLMWSDPED-IETWAVSPRGAGWLFGSRVTSEFN-HINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (294)
Q Consensus 183 ~~~~~~~~llWsdp~~-~~~~~~~~rg~~~~fg~~~~~~fl-~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~ 260 (294)
.......+|.+... ..... . +.. ..+. ...+.+.+|.||++.+..... + ..+-|-+..-|.
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~-----~---~~~---~~~~~~~~~~~~vv~GHt~~~~~~~~---~-~~i~IDtGav~g 211 (234)
T cd07423 149 --KRVRSFALYGDTTGETDEFG-----L---PVR---RDWAKEYRGDALVVYGHTPVPEPRWL---N-NTINIDTGCVFG 211 (234)
T ss_pred --hhheeeeecccccCCcCCCC-----C---ccc---hhhHhhCCCCeEEEECCCCCccceEe---C-CEEEEECCCCCC
Confidence 00112234443210 00000 0 000 0011 124567899999998754322 3 356777776663
Q ss_pred ccCCCcEEEEEEcCCC
Q 022658 261 YRCGNVASILSFNENM 276 (294)
Q Consensus 261 ~~~~n~~avl~i~~~~ 276 (294)
++=+.+.+++..
T Consensus 212 ----G~Lt~l~~~~~~ 223 (234)
T cd07423 212 ----GKLTALRYPERE 223 (234)
T ss_pred ----CcceEEECCCCc
Confidence 244556666543
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=3.2e-26 Score=202.03 Aligned_cols=116 Identities=25% Similarity=0.377 Sum_probs=92.5
Q ss_pred cEeecCCCCHHHHHHHHHhCCCC--------CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhh
Q 022658 46 TVCGDIHGQFHDLMKLFQTGGHV--------PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLT 117 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~ 117 (294)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999998764 568999999999999999999999999864 34799999999999875
Q ss_pred hhcCC------h-----------HHHHHHhc-CcchhhhhhhhhcccceeEEEeceEEEecCCCC
Q 022658 118 QVYGF------Y-----------DECQRKYG-NANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLS 164 (294)
Q Consensus 118 ~~~gf------~-----------~e~~~~~~-~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~ 164 (294)
...+. . .+..+.++ .....+...++|+.||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 33220 0 12333333 124456788999999999875 67999999985
No 24
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.94 E-value=9e-26 Score=203.48 Aligned_cols=190 Identities=20% Similarity=0.261 Sum_probs=134.5
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC------CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCC-cEEEeCCCCchhh
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV------PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPA-NITLLRGNHESRQ 115 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~ 115 (294)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36899999999999999999876422 2468999999999999999999999999988876 6889999999886
Q ss_pred hhhhcC-----------------------------------------C----------------------hHHHHHHhcC
Q 022658 116 LTQVYG-----------------------------------------F----------------------YDECQRKYGN 132 (294)
Q Consensus 116 ~~~~~g-----------------------------------------f----------------------~~e~~~~~~~ 132 (294)
+..... + ..++..+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 642211 0 1244556654
Q ss_pred c--------chhhhhhhhhcccceeEEEeceE-------------EEecCCCCCCCCCHHHHHhhh-ccCCCCCCCCccc
Q 022658 133 A--------NAWRYCTDVFDYLTLSAIIDGTV-------------LCVHGGLSPDIRTIDQIRVIE-RNCEIPHEGPFCD 190 (294)
Q Consensus 133 ~--------~~~~~~~~~~~~LP~~~~i~~~~-------------l~vHgGi~~~~~~~~~i~~i~-r~~~~~~~~~~~~ 190 (294)
. .+-+...+|++.||..... +.+ +|||||+.|..+..+|.+.+. +....| -.+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccc
Confidence 2 2234677889999998764 335 999999999998888876544 222222 248
Q ss_pred cccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCc
Q 022658 191 LMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCY 261 (294)
Q Consensus 191 llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~ 261 (294)
++|.| ..|...++... ..-.+||.||+.. ... .+.-|.|-+...|.+
T Consensus 237 ~l~~R----~~f~~~~~~~~--------------~~~~~VVhGHt~~-----~~~-~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 237 PLSGR----KNVWNIPQELA--------------DKKTIVVSGHHGK-----LHI-DGLRLIIDEGGGFDD 283 (304)
T ss_pred ccccc----hhhhcCccccc--------------CCCeEEEECCCCC-----cee-cCCEEEEECCCCcCC
Confidence 99998 33322222110 0125799999932 334 566678888887754
No 25
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=1.3e-25 Score=203.42 Aligned_cols=219 Identities=18% Similarity=0.254 Sum_probs=143.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 121 (294)
|+++||||||||++.|.++|+++++. ..+.++|+||+|||||+|.+|+++++++. .++++|+||||.+++...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57899999999999999999999874 56899999999999999999999998873 46899999999998876665
Q ss_pred Ch----HHHHHHhcCcchhhhhhhhhcccceeEEE-eceEEEecCCCCCCCCCHHHHH---hhhccCCCCC-CCCccccc
Q 022658 122 FY----DECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIRTIDQIR---VIERNCEIPH-EGPFCDLM 192 (294)
Q Consensus 122 f~----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~~~~~~i~---~i~r~~~~~~-~~~~~~ll 192 (294)
.. .....++-.....+...++++.+|+...+ ++++++||||++|.+...+... .+...+..+. ...+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 42 12233332333456678899999998776 5679999999999874332221 1111111111 11233444
Q ss_pred cCCCCCCCCCccCCCCCc-cccCHHHH--HHHHHh-----------------------------CCCcEEEeccceeecC
Q 022658 193 WSDPEDIETWAVSPRGAG-WLFGSRVT--SEFNHI-----------------------------NNLDLVCRAHQLVQEG 240 (294)
Q Consensus 193 Wsdp~~~~~~~~~~rg~~-~~fg~~~~--~~fl~~-----------------------------~~~~~ivrgH~~~~~G 240 (294)
|++|. .|.++.+|.. ..+.-.++ .+||.. ..-..||-||.+...|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 54442 3333332221 11111111 111111 1234799999998778
Q ss_pred eeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCC
Q 022658 241 LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNEN 275 (294)
Q Consensus 241 ~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~ 275 (294)
... ...++.+.|.--+ +++=..+.+++.
T Consensus 234 ~~~---~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 234 LTT---PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred ccC---CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 876 5668888888655 335567778743
No 26
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=1.4e-25 Score=199.24 Aligned_cols=175 Identities=21% Similarity=0.314 Sum_probs=125.3
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC--CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhc
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY 120 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 120 (294)
|++++||||||+++.|.++++.+... +.+.++|+|||||||++|.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999988543 468999999999999999999999998754 355799999999998765321
Q ss_pred C--------------ChHHHHHHhcCcc------------------------------hhhhhhhhhcccceeEEEeceE
Q 022658 121 G--------------FYDECQRKYGNAN------------------------------AWRYCTDVFDYLTLSAIIDGTV 156 (294)
Q Consensus 121 g--------------f~~e~~~~~~~~~------------------------------~~~~~~~~~~~LP~~~~i~~~~ 156 (294)
+ ...+++.+|+... ....+..|++.||..... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 1 0134455664210 113345588899998874 679
Q ss_pred EEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccce
Q 022658 157 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQL 236 (294)
Q Consensus 157 l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~ 236 (294)
+|||||+.|..+..+| ...+++|.|+ |. + ...-+.||+||||
T Consensus 159 ifVHAGi~p~~~~~~q--------------~~~~llWiR~-----f~--~-----------------~~~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQ--------------TIDQLIWSRD-----FQ--P-----------------RKDGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhC--------------CHhHeEEecc-----cC--C-----------------CCCCcEEEECCCC
Confidence 9999999988653332 1368999993 21 1 1123479999999
Q ss_pred eecCeeEEecCCeEEEEEcCCCC
Q 022658 237 VQEGLKYMFQDKGLVTVWSAPNY 259 (294)
Q Consensus 237 ~~~G~~~~~~~~~~itvfSa~~y 259 (294)
+..+.... .++.|.|.+...|
T Consensus 201 ~~~~~~~~--~~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEI--NGDMLMCDVGAVF 221 (235)
T ss_pred CCCCcccc--cCCEEEeecCccc
Confidence 97654332 2445777776544
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=3.6e-25 Score=194.82 Aligned_cols=179 Identities=20% Similarity=0.225 Sum_probs=119.1
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhc
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY 120 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 120 (294)
.+|++||||||||++.|.++|+.+++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 359999999999999999999999876 5789999999999999999999998552 478999999999887532
Q ss_pred CChHHHHH--------HhcC--cchhhhhhhhhcccceeEEE---eceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCC
Q 022658 121 GFYDECQR--------KYGN--ANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGP 187 (294)
Q Consensus 121 gf~~e~~~--------~~~~--~~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~ 187 (294)
+-...... .... ...+....++++.||+...+ ++++++||||++.... ..+ . +..
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~-~~~-----~------~~~ 157 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY-EWQ-----K------DVD 157 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch-hhh-----c------cCC
Confidence 21101001 1111 12234556889999998765 3579999999743211 100 0 011
Q ss_pred ccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCC
Q 022658 188 FCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 259 (294)
Q Consensus 188 ~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y 259 (294)
..+++|+++.....+. .+ ...+.+.+|.|||+.+.-.. .+..+-|-+.+-|
T Consensus 158 ~~~~~w~r~~~~~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~----~~~~i~IDtGav~ 208 (218)
T PRK11439 158 LHQVLWSRSRLGERQK--GQ---------------GITGADHFWFGHTPLRHRVD----IGNLHYIDTGAVF 208 (218)
T ss_pred ccceEEcChhhhhccc--cc---------------cccCCCEEEECCccCCCccc----cCCEEEEECCCCC
Confidence 3467998732111110 00 11255679999999875432 2346677766655
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.92 E-value=4.6e-24 Score=186.29 Aligned_cols=170 Identities=25% Similarity=0.348 Sum_probs=116.9
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 121 (294)
+|+++||||||++.+|.++++.++.. ..+.++++||++||||++.++++++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 57999999999999999999998764 478999999999999999999998864 25899999999998876544
Q ss_pred --ChHHHHHHhcCc--------chhhhhhhhhcccceeEEEe---ceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCc
Q 022658 122 --FYDECQRKYGNA--------NAWRYCTDVFDYLTLSAIID---GTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPF 188 (294)
Q Consensus 122 --f~~e~~~~~~~~--------~~~~~~~~~~~~LP~~~~i~---~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~ 188 (294)
...+....++.. ..++...++++.||+...+. +++++||||+++... ..... + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 222222223221 13445777999999998774 479999999865432 11100 0 11122345
Q ss_pred cccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 189 CDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 189 ~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
.+++|++|...... +...-+.+.||.||++.+..+.
T Consensus 149 ~~~~w~~~~~~~~~------------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQKAQ------------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhhhcC------------------ccccCCCCEEEECCCCCCcceE
Confidence 67899874321110 0001145789999999876443
No 29
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=1.3e-24 Score=194.98 Aligned_cols=120 Identities=24% Similarity=0.328 Sum_probs=99.0
Q ss_pred ccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCCh
Q 022658 45 VTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (294)
Q Consensus 45 i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~ 123 (294)
++||||||||+++|+++|+++++. +.++++|+||+|||||+|.+|++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 57999999999999999999999999986 3689999999999887666542
Q ss_pred ----HHHHHHhcCcchhhhhhhhhcccceeEEEec-eEEEecCCCCCCCC
Q 022658 124 ----DECQRKYGNANAWRYCTDVFDYLTLSAIIDG-TVLCVHGGLSPDIR 168 (294)
Q Consensus 124 ----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~~ 168 (294)
.+...++-.....++..++++++|+...+++ ++++|||||+|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 1222233223344678899999999988754 79999999999874
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=4.5e-24 Score=192.18 Aligned_cols=122 Identities=22% Similarity=0.304 Sum_probs=100.4
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 121 (294)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|.+|++++.++. .++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999875 56899999999999999999999998875 35789999999999887776
Q ss_pred Ch----HHHHHHhcCcchhhhhhhhhcccceeEEEe-ceEEEecCCCCCCCC
Q 022658 122 FY----DECQRKYGNANAWRYCTDVFDYLTLSAIID-GTVLCVHGGLSPDIR 168 (294)
Q Consensus 122 f~----~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~-~~~l~vHgGi~~~~~ 168 (294)
+. .+....+-.....++..++++++|+..... .++++|||||+|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 122222223355678899999999987653 469999999999985
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=2e-22 Score=177.38 Aligned_cols=117 Identities=22% Similarity=0.225 Sum_probs=86.6
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhc
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY 120 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 120 (294)
.+|++||||||||+++|+++|+.+.+. ..++++|+||+|||||+|.++++++.+ .++++|+||||.+++....
T Consensus 14 ~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~ 87 (218)
T PRK09968 14 YRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFE 87 (218)
T ss_pred CCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHh
Confidence 358999999999999999999998754 568999999999999999999998853 2588999999999886432
Q ss_pred CChH--------HHHHHhcCc--chhhhhhhhhcccceeEEE---eceEEEecCCCC
Q 022658 121 GFYD--------ECQRKYGNA--NAWRYCTDVFDYLTLSAII---DGTVLCVHGGLS 164 (294)
Q Consensus 121 gf~~--------e~~~~~~~~--~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi~ 164 (294)
.-.. +...+...+ ........+++.||....+ ++++++||||++
T Consensus 88 ~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 88 TGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred cCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 1000 111111110 1122334589999998766 357999999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.48 E-value=2.3e-13 Score=110.91 Aligned_cols=160 Identities=23% Similarity=0.231 Sum_probs=100.1
Q ss_pred CCccEeecCCCCHHHH----HHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHH--HHhhhhCCCcEEEeCCCCchhhh
Q 022658 43 SPVTVCGDIHGQFHDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTIL--LLLKARYPANITLLRGNHESRQL 116 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~l~~~~p~~v~~lrGNHE~~~~ 116 (294)
+||++|||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 3789999999999987 44444444567789999999999999887766544 34444555679999999999876
Q ss_pred hhhcCChHHHHHHh-c--------------------------------CcchhhhhhhhhcccceeEEEeceEEEecCCC
Q 022658 117 TQVYGFYDECQRKY-G--------------------------------NANAWRYCTDVFDYLTLSAIIDGTVLCVHGGL 163 (294)
Q Consensus 117 ~~~~gf~~e~~~~~-~--------------------------------~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi 163 (294)
.............+ . ........................++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 54332211111000 0 00000111111222222233356799999988
Q ss_pred CCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEecccee
Q 022658 164 SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 237 (294)
Q Consensus 164 ~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~ 237 (294)
.+........ .....+...+..++++.++++++.||++.
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6654322211 12245668899999999999999999975
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.46 E-value=3.4e-12 Score=105.83 Aligned_cols=82 Identities=27% Similarity=0.356 Sum_probs=62.2
Q ss_pred CccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCCh
Q 022658 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (294)
Q Consensus 44 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~ 123 (294)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. +. ....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hh--cCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998754 789999999999998765 11 12358999999998532
Q ss_pred HHHHHHhcCcchhhhhhhhhcccceeEEE---eceEEEecCCC
Q 022658 124 DECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHGGL 163 (294)
Q Consensus 124 ~e~~~~~~~~~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi 163 (294)
+..+|....+ +.+++++||..
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcc
Confidence 2345544333 34799999964
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.42 E-value=8.2e-12 Score=106.72 Aligned_cols=69 Identities=20% Similarity=0.265 Sum_probs=56.3
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCC--------cHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN--------SLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
||+.++||+||++.++.++++.+...+.+.++++||++|+|+. +.++++.+.++. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5799999999999999999988766677899999999999873 456676665442 3589999999975
Q ss_pred h
Q 022658 115 Q 115 (294)
Q Consensus 115 ~ 115 (294)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 4
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.38 E-value=1.6e-11 Score=102.49 Aligned_cols=63 Identities=22% Similarity=0.207 Sum_probs=50.3
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCC-CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+++.++||+||+..++..+++.+... +.+.++++||++ +.+++..+.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998887777666555 678999999998 467777776553 2489999999984
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.35 E-value=2.2e-11 Score=100.35 Aligned_cols=125 Identities=23% Similarity=0.290 Sum_probs=81.7
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGF 122 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf 122 (294)
||++++||+|++.+.+.++++.+ ...+.++++||++| ..++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 58999999999999999999988 35788999999998 37777777554 49999999996542221110
Q ss_pred hHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCC
Q 022658 123 YDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETW 202 (294)
Q Consensus 123 ~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~ 202 (294)
. . +........ -..+++++||.....
T Consensus 69 ~-----------~------~~~~~~~~~-~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 E-----------Y------LLDALRLTI-DGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp C-----------S------SHSEEEEEE-TTEEEEEESSTSSSS------------------------------------
T ss_pred c-----------c------cccceeeee-cCCeEEEECCCCccc------------------------------------
Confidence 0 0 111222111 156899999965330
Q ss_pred ccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 203 AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 203 ~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
..+.+.+.+.+...+.++++.||+..+.-.+
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 125 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK 125 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE
Confidence 1234456677779999999999999865444
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.22 E-value=8.2e-11 Score=95.57 Aligned_cols=118 Identities=22% Similarity=0.184 Sum_probs=80.8
Q ss_pred CccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcH--HHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcC
Q 022658 44 PVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSL--EVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (294)
Q Consensus 44 ~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 121 (294)
++.++||+||++. .....+.+.++++||+++++..+. +.++++.++. .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5789999999977 223346788999999999886432 3455554442 22 36789999996421
Q ss_pred ChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCC
Q 022658 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIET 201 (294)
Q Consensus 122 f~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~ 201 (294)
.-+.+++++||.+ ... .+ ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p--~~~-~~-------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPP--YGH-LD-------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCC--CcC-cc-------------------cccc-------
Confidence 1145799999943 211 00 0000
Q ss_pred CccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 202 WAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 202 ~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
....|.+.+.+++++.+.++++.||++.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567888999999999999999999998887
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.14 E-value=3.1e-10 Score=100.69 Aligned_cols=157 Identities=18% Similarity=0.216 Sum_probs=97.6
Q ss_pred CccEeecCCCCHHHHH-HHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhh---
Q 022658 44 PVTVCGDIHGQFHDLM-KLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQV--- 119 (294)
Q Consensus 44 ~i~viGDiHG~~~~l~-~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~--- 119 (294)
+|+++|||||++.... +.++. ...+.++++||+++ .+.+++..+.++. ..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l~----~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSLP----LPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhCC----CCeEEEcCCCcccccccccch
Confidence 6899999999987642 23333 34589999999986 4567777665552 348999999997553200
Q ss_pred c---------------------------------C--------ChH-HHHHHhcCcchhhhhhhhhcccceeEEEeceEE
Q 022658 120 Y---------------------------------G--------FYD-ECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 157 (294)
Q Consensus 120 ~---------------------------------g--------f~~-e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l 157 (294)
+ + +.. ++...|+..+.++.+...++.++.+......++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 011 344556555666777778888864333345799
Q ss_pred EecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCC----CcEEEec
Q 022658 158 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINN----LDLVCRA 233 (294)
Q Consensus 158 ~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~----~~~ivrg 233 (294)
+.|+++.......+. .+. ..|.+. +..+|...+++.+++.. .++++-|
T Consensus 152 iaH~~~~G~g~~~~~---------------~cg---------~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAED---------------PCG---------RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCccccc---------------ccc---------cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 999997543221110 111 122221 22467777766666554 7999999
Q ss_pred cceee
Q 022658 234 HQLVQ 238 (294)
Q Consensus 234 H~~~~ 238 (294)
|.+..
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 98865
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.11 E-value=9.1e-09 Score=90.86 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=59.4
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
.+++.++||+||++..+.++++.......+.+|.+||++++|+...++..++..+... +..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 3679999999999999999998765566789999999999997777777777666533 23489999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.11 E-value=5.4e-09 Score=89.22 Aligned_cols=59 Identities=20% Similarity=0.387 Sum_probs=42.9
Q ss_pred CccEeecCC-CCHH-----HHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 44 PVTVCGDIH-GQFH-----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 44 ~i~viGDiH-G~~~-----~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .++++++..+. ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 24444433 45689999999985 77777776653 2489999999973
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.03 E-value=8.3e-09 Score=92.07 Aligned_cols=214 Identities=12% Similarity=0.086 Sum_probs=109.8
Q ss_pred CCccEeecCCCC------HHHHHHHHHhCCCCCCceEEEeCCeecC--C-----CCcHHHHHHHHHhhhhCCCcEEEeCC
Q 022658 43 SPVTVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDR--G-----YNSLEVFTILLLLKARYPANITLLRG 109 (294)
Q Consensus 43 ~~i~viGDiHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~l~~~~p~~v~~lrG 109 (294)
|++++|||+|.. ...+.+.|+.. ....+.++++||++|. | +...++++++..++.. +..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 579999999954 22445555432 2356899999999985 2 2345677777777643 235999999
Q ss_pred CCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEE-eceEEEecCCCCCCCC-CHHHHHhhhccCCCC---C
Q 022658 110 NHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIR-TIDQIRVIERNCEIP---H 184 (294)
Q Consensus 110 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~~-~~~~i~~i~r~~~~~---~ 184 (294)
|||..... ...+..+. ..+.. |....+ +.+++++||-.-+... .....+.+-|..... .
T Consensus 79 NHD~~~~~-------~~~~~~g~--------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 142 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM--------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFL 142 (241)
T ss_pred CCchhhhH-------HHHHhCCC--------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHH
Confidence 99975311 11122221 11111 122222 5679999998654221 112222222211000 0
Q ss_pred CCCccccccCCCCCCCCCcc-----CC-CCCc-cccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCC
Q 022658 185 EGPFCDLMWSDPEDIETWAV-----SP-RGAG-WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAP 257 (294)
Q Consensus 185 ~~~~~~llWsdp~~~~~~~~-----~~-rg~~-~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~ 257 (294)
.-.....+|-- +.+.. +. +... .-..++++.+.+++.+.+.+|.||++.+.-..... ++.-++-.+-+
T Consensus 143 ~~p~~~~~~ia----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~~~~~~~~lg 217 (241)
T PRK05340 143 ALPLSIRLRIA----AKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQA-GGQPATRIVLG 217 (241)
T ss_pred hCCHHHHHHHH----HHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccC-CCcceEEEEeC
Confidence 00000000000 00000 00 0111 22355778889999999999999999875443322 32112222222
Q ss_pred CCCccCCCcEEEEEEcCCCceeEEEEe
Q 022658 258 NYCYRCGNVASILSFNENMVRYPACWH 284 (294)
Q Consensus 258 ~y~~~~~n~~avl~i~~~~~~~~~~~~ 284 (294)
.. ...+.++.++++ ..++..|.
T Consensus 218 dw----~~~~~~~~~~~~-~~~~~~~~ 239 (241)
T PRK05340 218 DW----HEQGSVLKVDAD-GVELIPFP 239 (241)
T ss_pred CC----CCCCeEEEEECC-ceEEEeCC
Confidence 22 124788888876 46666554
No 42
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.98 E-value=2.3e-09 Score=86.63 Aligned_cols=143 Identities=45% Similarity=0.807 Sum_probs=116.4
Q ss_pred hhhhcCChHHHHHHhcCcchhhh---hhhhhcccceeEEEec-eEEEecCCCCCCC-CCHHHHHhhhccC--CCCCCCCc
Q 022658 116 LTQVYGFYDECQRKYGNANAWRY---CTDVFDYLTLSAIIDG-TVLCVHGGLSPDI-RTIDQIRVIERNC--EIPHEGPF 188 (294)
Q Consensus 116 ~~~~~gf~~e~~~~~~~~~~~~~---~~~~~~~LP~~~~i~~-~~l~vHgGi~~~~-~~~~~i~~i~r~~--~~~~~~~~ 188 (294)
+...+++..++...++....|.. ..++|+.+|+.+.+.+ .++|.|+++++.. ....+++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44556777776677765435666 9999999999998877 8999999999975 6678888887766 55666666
Q ss_pred cccccCCCCC--CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCC
Q 022658 189 CDLMWSDPED--IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (294)
Q Consensus 189 ~~llWsdp~~--~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~ 260 (294)
.+.+|+++.. ...|.++++|.+..+ .+....|...+..+.+.++|.....++...+ .+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~-~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVF-GGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEe-CCCeeeEEeccccc
Confidence 7779999884 688999999998776 7888889988888889999999999999988 54799999999986
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.95 E-value=2.9e-08 Score=84.18 Aligned_cols=66 Identities=20% Similarity=0.287 Sum_probs=47.6
Q ss_pred ccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCc-HHHHHHHHHhhhhCCCcEEEeCCCCchhhh
Q 022658 45 VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-LEVFTILLLLKARYPANITLLRGNHESRQL 116 (294)
Q Consensus 45 i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 116 (294)
|.++||+||++..+.+ ..+...+.+.+|+.||++++|... .+.+..+.++ +..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999998877 333344668999999999998753 3333333332 3348999999997543
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.95 E-value=3.3e-09 Score=89.00 Aligned_cols=67 Identities=19% Similarity=0.145 Sum_probs=47.4
Q ss_pred ccEeecCCCCHHHHHHHH-HhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 45 VTVCGDIHGQFHDLMKLF-QTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 45 i~viGDiHG~~~~l~~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+.++||+|++.......+ +.......+.++++||+++++..+.... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 578999999987776655 2233455688999999999887655443 22222 2334699999999986
No 45
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.94 E-value=3.8e-08 Score=85.61 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=118.7
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCee--cCCCCcHHHHHH--HHHhhhhCCCcEEEeCCCCchhhhh
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV--DRGYNSLEVFTI--LLLLKARYPANITLLRGNHESRQLT 117 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~evl~~--l~~l~~~~p~~v~~lrGNHE~~~~~ 117 (294)
.+++..+.|+||..+.+.+++..++....+-+++.||+. ++|+.- .+.+. +..++.. -..++.++||-|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-VAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-HHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 478999999999999999999988877889999999999 888843 23332 3444422 23599999999987543
Q ss_pred hhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCC--C----CHHHHHhhhccC-CCCCCCCccc
Q 022658 118 QVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI--R----TIDQIRVIERNC-EIPHEGPFCD 190 (294)
Q Consensus 118 ~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~--~----~~~~i~~i~r~~-~~~~~~~~~~ 190 (294)
... ...+. .+ . +-...+++--++-=||..|.. + ..++|....+.. +...+..---
T Consensus 81 ~~l-------~~~~~-~v--------~--~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il 142 (226)
T COG2129 81 DVL-------KNAGV-NV--------H--GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNIL 142 (226)
T ss_pred HHH-------Hhccc-cc--------c--cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEE
Confidence 211 11110 00 0 001111222222223322211 0 112222111110 0000000000
Q ss_pred cccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEE
Q 022658 191 LMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASIL 270 (294)
Q Consensus 191 llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl 270 (294)
++..-|-+..-- .+.| -.--|..+++++.++.+-.+.++||-+...|... -|. ||+-+|.-.+ .-..|++
T Consensus 143 ~~HaPP~gt~~d--~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~---iG~--TivVNPG~~~--~g~yA~i 212 (226)
T COG2129 143 LTHAPPYGTLLD--TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK---IGN--TIVVNPGPLG--EGRYALI 212 (226)
T ss_pred EecCCCCCcccc--CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccc---cCC--eEEECCCCcc--CceEEEE
Confidence 011111100000 1111 1246899999999999999999999999889877 344 6777776543 2367899
Q ss_pred EEcCCCceeEEEEe
Q 022658 271 SFNENMVRYPACWH 284 (294)
Q Consensus 271 ~i~~~~~~~~~~~~ 284 (294)
.++++ .+...+|.
T Consensus 213 ~l~~~-~Vk~~~~~ 225 (226)
T COG2129 213 ELEKE-VVKLEQFS 225 (226)
T ss_pred EecCc-EEEEEEec
Confidence 99876 77777764
No 46
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.93 E-value=1.1e-08 Score=80.44 Aligned_cols=117 Identities=25% Similarity=0.319 Sum_probs=83.1
Q ss_pred cEeecCCCCHHHHHHHH--HhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCCh
Q 022658 46 TVCGDIHGQFHDLMKLF--QTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~ 123 (294)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999988887765 34444566889999999999888766544422222233456999999999
Q ss_pred HHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCc
Q 022658 124 DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWA 203 (294)
Q Consensus 124 ~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~ 203 (294)
++++|+.+.+...... +..
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~~-------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PDE-------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------ccc--------
Confidence 8999997654432110 000
Q ss_pred cCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 204 VSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 204 ~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
......+...+...+.+.+|.||++....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0145778888899999999999999876554
No 47
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.85 E-value=3.6e-08 Score=79.65 Aligned_cols=107 Identities=16% Similarity=0.098 Sum_probs=75.5
Q ss_pred cEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHH
Q 022658 46 TVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDE 125 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e 125 (294)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+.+++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776664 45678999999973 34556665542 223889999999
Q ss_pred HHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCCCCCccC
Q 022658 126 CQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVS 205 (294)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~ 205 (294)
-+++++|+- |.... +.+ .
T Consensus 57 ----------------------------~~Ilv~H~p--p~~~~-----------------------~~~----~----- 74 (129)
T cd07403 57 ----------------------------VDILLTHAP--PAGIG-----------------------DGE----D----- 74 (129)
T ss_pred ----------------------------cCEEEECCC--CCcCc-----------------------Ccc----c-----
Confidence 368999983 21110 000 0
Q ss_pred CCCCccccCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 206 PRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 206 ~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
...-|.+.+.+++++.+.+.++.||+..+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356788889999999999999999987766
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.85 E-value=2.6e-08 Score=88.37 Aligned_cols=206 Identities=11% Similarity=0.064 Sum_probs=102.4
Q ss_pred ccEeecCCCCH------HHHHHHHHhCCCCCCceEEEeCCeecCC-----CC--cHHHHHHHHHhhhhCCCcEEEeCCCC
Q 022658 45 VTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRG-----YN--SLEVFTILLLLKARYPANITLLRGNH 111 (294)
Q Consensus 45 i~viGDiHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~l~~~~p~~v~~lrGNH 111 (294)
++++||+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|+.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999542 234444443322 568999999999952 11 13456666666543 34699999999
Q ss_pred chhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEE-eceEEEecCCCCCCC-CCHHHHHhhhccC-------CC
Q 022658 112 ESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDI-RTIDQIRVIERNC-------EI 182 (294)
Q Consensus 112 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~-~~~~~i~~i~r~~-------~~ 182 (294)
|...-. ...+..+- .++.. |....+ +.+++++||-.-..- ......+.+-|.. ..
T Consensus 79 D~~~~~-------~~~~~~gi--------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l 142 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM--------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHL 142 (231)
T ss_pred chhhhH-------HHHHHCCC--------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 975311 11111111 11111 111122 578999999753211 1111122221110 00
Q ss_pred CC--CCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCC
Q 022658 183 PH--EGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYC 260 (294)
Q Consensus 183 ~~--~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~ 260 (294)
|. -..+...+++......... + ..-....+..+.+.++..+.+++|+||++.+.-..... ++.-.+-.+-++..
T Consensus 143 ~~~~r~~l~~~~~~~s~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~-~~~~~~~~~lgdW~ 218 (231)
T TIGR01854 143 PLAVRVKLARKIRAESRADKQMK--S-QDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQA-DGQPATRIVLGDWY 218 (231)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCC--c-chhhCCCHHHHHHHHHHcCCCEEEECCccCcceeeccc-CCCccEEEEECCCc
Confidence 00 0001112222110000000 0 01123356778888999999999999999876554433 33222334433332
Q ss_pred ccCCCcEEEEEEcCCC
Q 022658 261 YRCGNVASILSFNENM 276 (294)
Q Consensus 261 ~~~~n~~avl~i~~~~ 276 (294)
..+.++.+++++
T Consensus 219 ----~~~~~~~~~~~g 230 (231)
T TIGR01854 219 ----RQGSILRVDADG 230 (231)
T ss_pred ----cCCeEEEEcCCC
Confidence 246777777764
No 49
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.78 E-value=3e-07 Score=77.94 Aligned_cols=159 Identities=16% Similarity=0.101 Sum_probs=98.0
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGF 122 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf 122 (294)
+++.|+||.||...+..+..+.......+.+|.+||++.... ...+..- ...+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~--~~~l~~~------~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT--LDALEGG------LAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc--hHHhhcc------cccceEEEEccCCCcccc-----
Confidence 679999999999976666666666667789999999995433 2222210 134699999999985422
Q ss_pred hHHHHHHhcCcchhhhhhhhhcccceeEEE---eceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCCC
Q 022658 123 YDECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDI 199 (294)
Q Consensus 123 ~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~ 199 (294)
..+|....+ +-|++++||..-.-.
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~-------------------------------- 95 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVK-------------------------------- 95 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccc--------------------------------
Confidence 223332222 468999999542211
Q ss_pred CCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccC--CCcEEEEEEcC-CC
Q 022658 200 ETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRC--GNVASILSFNE-NM 276 (294)
Q Consensus 200 ~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~--~n~~avl~i~~-~~ 276 (294)
.....+..+.+..+.+.+|.|||+.+.=++. ++ +++-+|.-+... ++..+++.++. +.
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~---~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~ 156 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAEKV---GG---ILLVNPGSVSGPRGGNPASYAILDVDNL 156 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEEEE---CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCC
Confidence 1123455566777899999999999754433 34 334333322222 33435555543 36
Q ss_pred ceeEEEEecC
Q 022658 277 VRYPACWHAG 286 (294)
Q Consensus 277 ~~~~~~~~~~ 286 (294)
++....++..
T Consensus 157 ~~~~~~~~~~ 166 (172)
T COG0622 157 EVEVLFLERD 166 (172)
T ss_pred EEEEEEeecc
Confidence 6776666544
No 50
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.78 E-value=1.3e-07 Score=77.15 Aligned_cols=118 Identities=20% Similarity=0.227 Sum_probs=77.0
Q ss_pred ccEeecCCCCHH------H----HHHHHHhCCCCCCceEEEeCCeecCCCCc--HHHHHHHHHhhhhCCCcEEEeCCCCc
Q 022658 45 VTVCGDIHGQFH------D----LMKLFQTGGHVPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYPANITLLRGNHE 112 (294)
Q Consensus 45 i~viGDiHG~~~------~----l~~ll~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~lrGNHE 112 (294)
|+.++|+|=... . +.++++.+...+.+.++++||+++.|... .+...++..+.... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899994311 1 22344444445678999999999988742 23344555554321 25899999999
Q ss_pred hhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccc
Q 022658 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLM 192 (294)
Q Consensus 113 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~ll 192 (294)
. ++++|..+.+......
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~~~--------------------- 96 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGSGR--------------------- 96 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcccc---------------------
Confidence 7 8899985533211000
Q ss_pred cCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeE
Q 022658 193 WSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKY 243 (294)
Q Consensus 193 Wsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~ 243 (294)
+ . ..+.+.+.+.+++.++++++.||+..+..+..
T Consensus 97 --~---------~------~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 97 --E---------R------LLDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred --c---------c------CCCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 0 0 01557788999999999999999998765553
No 51
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.69 E-value=6.1e-07 Score=78.71 Aligned_cols=194 Identities=15% Similarity=0.117 Sum_probs=101.8
Q ss_pred CccEeecCCCC----HHHH----HHHHHhCCCCCCceEEEeCCeecCCCCcH---HHHHHHHHhhhhCCCcEEEeCCCCc
Q 022658 44 PVTVCGDIHGQ----FHDL----MKLFQTGGHVPETNYIFMGDFVDRGYNSL---EVFTILLLLKARYPANITLLRGNHE 112 (294)
Q Consensus 44 ~i~viGDiHG~----~~~l----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~l~~~~p~~v~~lrGNHE 112 (294)
+++++||+|-- ...+ ..+++.+.....+.++++||++|.+.... .....+..|.. .+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 57899999952 2223 33444443345688999999999988432 22333444431 1223889999999
Q ss_pred hhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccc
Q 022658 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLM 192 (294)
Q Consensus 113 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~ll 192 (294)
... .-.+.. ....++.+.+.++..|- ..-++++|-=+.+..... ....
T Consensus 81 ~~~-~ld~~~---------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~~ 128 (214)
T cd07399 81 LVL-ALEFGP---------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSID 128 (214)
T ss_pred chh-hCCCCC---------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------cccc
Confidence 432 111110 11223334444443331 134788888432211100 0011
Q ss_pred cCCCCCCCCCccCCCCCccccCHHHHHHHHHhC-CCcEEEeccceeecCeeEE----ecCCeEEEEEcCCCCCccCCCcE
Q 022658 193 WSDPEDIETWAVSPRGAGWLFGSRVTSEFNHIN-NLDLVCRAHQLVQEGLKYM----FQDKGLVTVWSAPNYCYRCGNVA 267 (294)
Q Consensus 193 Wsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~-~~~~ivrgH~~~~~G~~~~----~~~~~~itvfSa~~y~~~~~n~~ 267 (294)
|.. ....+...+.+.++++ ++++++.||.+.. +.... ..++.+..+.+........+|..
T Consensus 129 ~~~--------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 129 YDS--------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred ccc--------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 110 1123456677888888 8999999998864 33332 11233444444332211112211
Q ss_pred -EEEEEcCC-CceeEEEEec
Q 022658 268 -SILSFNEN-MVRYPACWHA 285 (294)
Q Consensus 268 -avl~i~~~-~~~~~~~~~~ 285 (294)
.+++++++ .++.+++|.+
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 37778777 4788888754
No 52
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.56 E-value=3.4e-06 Score=76.36 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=49.4
Q ss_pred CccEeecCC--C-----------CHHHHHHHHHhCCCCCCceEEEeCCeecCCCC-cHHHHHHHHHhhhhCCCcEEEeCC
Q 022658 44 PVTVCGDIH--G-----------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYN-SLEVFTILLLLKARYPANITLLRG 109 (294)
Q Consensus 44 ~i~viGDiH--G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrG 109 (294)
|+++|||+| . ..+.+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24566777777755557889999999998873 223333333332222335999999
Q ss_pred CCchhh
Q 022658 110 NHESRQ 115 (294)
Q Consensus 110 NHE~~~ 115 (294)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 53
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.54 E-value=7.8e-06 Score=73.58 Aligned_cols=64 Identities=13% Similarity=0.011 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcE-EEEEEcCCCceeEEE
Q 022658 215 SRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVA-SILSFNENMVRYPAC 282 (294)
Q Consensus 215 ~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~-avl~i~~~~~~~~~~ 282 (294)
...+.+.+++.+++.++.||.+...... . +|--..+-+++.+.....+.| .++.++++. ++...
T Consensus 195 ~~~l~~ll~~~~V~~v~~GH~H~~~~~~--~-~g~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ 259 (262)
T cd07395 195 RKPLLDKFKKAGVKAVFSGHYHRNAGGR--Y-GGLEMVVTSAIGAQLGNDKSGLRIVKVTEDK-IVHEY 259 (262)
T ss_pred HHHHHHHHHhcCceEEEECccccCCceE--E-CCEEEEEcCceecccCCCCCCcEEEEECCCc-eeeee
Confidence 4567788899999999999999876543 3 443222223334332223344 488887664 34433
No 54
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.47 E-value=1.7e-06 Score=76.10 Aligned_cols=198 Identities=14% Similarity=0.147 Sum_probs=106.7
Q ss_pred cEeecCCCC------HHHHHHHHHhCCCCCCceEEEeCCeecC--CCC-----cHHHHHHHHHhhhhCCCcEEEeCCCCc
Q 022658 46 TVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDR--GYN-----SLEVFTILLLLKARYPANITLLRGNHE 112 (294)
Q Consensus 46 ~viGDiHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vDr--G~~-----s~evl~~l~~l~~~~p~~v~~lrGNHE 112 (294)
+.|||+|=. .+.|.+.|+.... ..+.+.++||++|- |.+ -.+|...|..+..+ ..+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~-~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~-G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAA-QADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARK-GTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccc-cCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhc-CCeEEEecCchH
Confidence 368999954 3444555554332 55889999999972 332 23456666665543 457999999999
Q ss_pred hhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccceeEEE---eceEEEecCCCCCCCCCHHHHHhhhccCCC-------
Q 022658 113 SRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEI------- 182 (294)
Q Consensus 113 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~------- 182 (294)
... ...+ ....|. +.-+|-...+ +.+++.+||..-- +....-....+....
T Consensus 79 fll-~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~--t~~~~y~~~r~~~~~~~~~~lf 139 (237)
T COG2908 79 FLL-GKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFC--TDDRAYQWFRYKVHWAWLQLLF 139 (237)
T ss_pred HHH-HHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCccc--chHHHHHHHHHHcccHHHHHHH
Confidence 543 2222 222332 2334443333 7899999996421 111111111111000
Q ss_pred ---CCC--CCccccccCCCCCCCCCccCCCCCc---cccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEE
Q 022658 183 ---PHE--GPFCDLMWSDPEDIETWAVSPRGAG---WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVW 254 (294)
Q Consensus 183 ---~~~--~~~~~llWsdp~~~~~~~~~~rg~~---~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvf 254 (294)
+.. ..+..-+|+. +.|........ ....+.++.+-+++++++.+|+||++.+..-.. ++...-+-
T Consensus 140 lnl~l~~R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i---~~~~yi~l 212 (237)
T COG2908 140 LNLPLRVRRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI---PGITYINL 212 (237)
T ss_pred HHhHHHHHHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC---CCceEEec
Confidence 000 0011224444 23333322222 134667888889999999999999998766555 34111111
Q ss_pred cCCCCCccCCCcEEEEEEcCCCc
Q 022658 255 SAPNYCYRCGNVASILSFNENMV 277 (294)
Q Consensus 255 Sa~~y~~~~~n~~avl~i~~~~~ 277 (294)
.+ -...+|+++++++..
T Consensus 213 Gd------W~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 GD------WVSEGSILEVDDGGL 229 (237)
T ss_pred Cc------chhcceEEEEecCcE
Confidence 11 113579999987643
No 55
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.41 E-value=4e-07 Score=79.68 Aligned_cols=71 Identities=23% Similarity=0.282 Sum_probs=53.9
Q ss_pred CCccEeecCCCCHH----HHHHHHHhCCCCCCceEEEeCCeecCCCCcH-HHHHHHHHhhhhCCCcEEEeCCCCchhh
Q 022658 43 SPVTVCGDIHGQFH----DLMKLFQTGGHVPETNYIFMGDFVDRGYNSL-EVFTILLLLKARYPANITLLRGNHESRQ 115 (294)
Q Consensus 43 ~~i~viGDiHG~~~----~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (294)
.++++++|+|+... .+.++++.+.....+.+++.||++|.+.... +...++..+... ..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~--~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAP--LGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCC--CCEEEECCCccccc
Confidence 57999999998743 6777777765556688999999999987764 566666655433 34899999999854
No 56
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.40 E-value=1.4e-05 Score=70.57 Aligned_cols=67 Identities=24% Similarity=0.346 Sum_probs=46.5
Q ss_pred CccEeecCCCC------------HHHHHHHHHhCCCC--CCceEEEeCCeecCCCCc--HHHHHHHHHhhhhCCCcEEEe
Q 022658 44 PVTVCGDIHGQ------------FHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNS--LEVFTILLLLKARYPANITLL 107 (294)
Q Consensus 44 ~i~viGDiHG~------------~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~l 107 (294)
|+++++|+|=. ...+.++++.+... +.+-+|++||+++.|... ..++..+.++ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 58899999944 34567777765443 668899999999987532 1233333333 3358999
Q ss_pred CCCCchh
Q 022658 108 RGNHESR 114 (294)
Q Consensus 108 rGNHE~~ 114 (294)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 57
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.39 E-value=2.4e-05 Score=71.06 Aligned_cols=71 Identities=14% Similarity=0.094 Sum_probs=47.7
Q ss_pred CCCccEeecCC-C-----------CHHHHHHHHHhCCC--CCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 022658 42 NSPVTVCGDIH-G-----------QFHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLL 107 (294)
Q Consensus 42 ~~~i~viGDiH-G-----------~~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 107 (294)
+.+++.|+|+| . ..+.+.++++.+.. ++.+-+|+.||+++.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 46799999999 1 24667778876633 34578999999999874 222323222222234459999
Q ss_pred CCCCchh
Q 022658 108 RGNHESR 114 (294)
Q Consensus 108 rGNHE~~ 114 (294)
+||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 58
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.39 E-value=5.6e-07 Score=81.77 Aligned_cols=70 Identities=19% Similarity=0.147 Sum_probs=53.5
Q ss_pred CCccEeecCCCC----HHHHHHHHHhCCCCCCceEEEeCCeecCC--CCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 43 SPVTVCGDIHGQ----FHDLMKLFQTGGHVPETNYIFMGDFVDRG--YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 43 ~~i~viGDiHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vDrG--~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
.++++++|+|.. ...+.++++.+...+.+.++++||++|++ ....++.+.+..++...| ++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 679999999976 55677777776556678999999999954 233456677777765444 99999999974
No 59
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.35 E-value=2.3e-05 Score=77.27 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=61.8
Q ss_pred CCCccEeecCC-CCH----HHHHHHHHhCC-C--------CCCceEEEeCCeecC-CCCc---------------HHHHH
Q 022658 42 NSPVTVCGDIH-GQF----HDLMKLFQTGG-H--------VPETNYIFMGDFVDR-GYNS---------------LEVFT 91 (294)
Q Consensus 42 ~~~i~viGDiH-G~~----~~l~~ll~~~~-~--------~~~~~~vfLGD~vDr-G~~s---------------~evl~ 91 (294)
+.++++|+|+| |.. ..+..+++.+. . ...+.+|++||++|. |+.+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 45799999999 652 23444444332 2 234789999999994 3221 13455
Q ss_pred HHHHhhhhCCCcEEEeCCCCchhhhhhhc-CChHHHHHHhcCcchhhhhhhhhcccceeEEE-eceEEEecCCC
Q 022658 92 ILLLLKARYPANITLLRGNHESRQLTQVY-GFYDECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGL 163 (294)
Q Consensus 92 ~l~~l~~~~p~~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi 163 (294)
+|.++... -.+++++||||........ .+.......+.. .-..++.. |....+ +.+++++||-.
T Consensus 323 ~L~~L~~~--i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPED--IKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhcC--CeEEEecCCCcchhhccCCCCccHHHHHhcCc-----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 55555432 3599999999975432111 121111111111 11233333 544444 45799999953
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.34 E-value=4.3e-06 Score=74.24 Aligned_cols=66 Identities=23% Similarity=0.243 Sum_probs=41.1
Q ss_pred ccEeecCCCC---------H-----HHHHHHHHhCC--CCCCceEEEeCCeecCCCCc--HHHHHHHHHhhhhCCCcEEE
Q 022658 45 VTVCGDIHGQ---------F-----HDLMKLFQTGG--HVPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYPANITL 106 (294)
Q Consensus 45 i~viGDiHG~---------~-----~~l~~ll~~~~--~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~ 106 (294)
|++++|||-. + +-+.++.+.+. .++.+.+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 1 22233333321 23678899999999877633 2334444333 234899
Q ss_pred eCCCCchh
Q 022658 107 LRGNHESR 114 (294)
Q Consensus 107 lrGNHE~~ 114 (294)
++||||..
T Consensus 77 V~GNHD~~ 84 (232)
T cd07393 77 LKGNHDYW 84 (232)
T ss_pred EeCCcccc
Confidence 99999973
No 61
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.22 E-value=4e-06 Score=72.97 Aligned_cols=30 Identities=10% Similarity=-0.023 Sum_probs=23.3
Q ss_pred cCHHHHHHHHHhCCCcEEEeccceeecCee
Q 022658 213 FGSRVTSEFNHINNLDLVCRAHQLVQEGLK 242 (294)
Q Consensus 213 fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~ 242 (294)
.....+.+.++..+.+.+|.||++.+.-.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 176 VFEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 345567777889999999999999865443
No 62
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.14 E-value=4.4e-06 Score=74.33 Aligned_cols=68 Identities=22% Similarity=0.187 Sum_probs=49.2
Q ss_pred CccEeecCCCCH------HHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 44 PVTVCGDIHGQF------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 44 ~i~viGDiHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+|.+++|+|+++ ..+.++++.+...+.+.+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999753 23566676665556789999999999876565555555443 233599999999974
No 63
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.13 E-value=0.00011 Score=66.21 Aligned_cols=73 Identities=23% Similarity=0.320 Sum_probs=51.7
Q ss_pred CCccEeecCCCC------HHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhh--hCCCcEEEeCCCCchh
Q 022658 43 SPVTVCGDIHGQ------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKA--RYPANITLLRGNHESR 114 (294)
Q Consensus 43 ~~i~viGDiHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~--~~p~~v~~lrGNHE~~ 114 (294)
++++.|+|+|-. .+.+.++++.+...+.|.+|+.||+.++|.. +-++.+..+-. ..|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~--~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEP--EEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCH--HHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 4455666777776666999999999999642 22233322222 4556799999999987
Q ss_pred hhh
Q 022658 115 QLT 117 (294)
Q Consensus 115 ~~~ 117 (294)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 644
No 64
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.08 E-value=7.8e-05 Score=67.19 Aligned_cols=71 Identities=17% Similarity=0.076 Sum_probs=43.3
Q ss_pred ccEeecCCCCH------HHH-HHHHHhCCCCCCceEEEeCCeecCCCCc--------H---HHHHHHHHhhhhCCCcEEE
Q 022658 45 VTVCGDIHGQF------HDL-MKLFQTGGHVPETNYIFMGDFVDRGYNS--------L---EVFTILLLLKARYPANITL 106 (294)
Q Consensus 45 i~viGDiHG~~------~~l-~~ll~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~l~~~~p~~v~~ 106 (294)
++.++|+|-.. ... ..+++.+...+.+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 46789999631 112 3344555455677999999999976521 1 2223233322223456899
Q ss_pred eCCCCchhh
Q 022658 107 LRGNHESRQ 115 (294)
Q Consensus 107 lrGNHE~~~ 115 (294)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 65
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.05 E-value=9e-06 Score=73.19 Aligned_cols=73 Identities=22% Similarity=0.227 Sum_probs=50.5
Q ss_pred CCccEeecCCC-C-----------HHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 022658 43 SPVTVCGDIHG-Q-----------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEV----FTILLLLKARYPANITL 106 (294)
Q Consensus 43 ~~i~viGDiHG-~-----------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~l~~~~p~~v~~ 106 (294)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+. ..++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 23455555555445678899999999987655443 34555555443346999
Q ss_pred eCCCCchhh
Q 022658 107 LRGNHESRQ 115 (294)
Q Consensus 107 lrGNHE~~~ 115 (294)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999853
No 66
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.02 E-value=1.8e-05 Score=66.63 Aligned_cols=66 Identities=24% Similarity=0.356 Sum_probs=44.0
Q ss_pred ccEeecCCCCHHHH---------------HHHHHhCC--CCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEe
Q 022658 45 VTVCGDIHGQFHDL---------------MKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLL 107 (294)
Q Consensus 45 i~viGDiHG~~~~l---------------~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 107 (294)
+++|+|+|=..... .++++.+. ..+.+.++++||+++++..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 46889999665432 22333321 2356899999999999986543 4445443 3359999
Q ss_pred CCCCchhh
Q 022658 108 RGNHESRQ 115 (294)
Q Consensus 108 rGNHE~~~ 115 (294)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999764
No 67
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.01 E-value=5.8e-05 Score=74.47 Aligned_cols=59 Identities=17% Similarity=0.322 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHhC-CCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhh
Q 022658 53 GQFHDLMKLFQTG-GHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQL 116 (294)
Q Consensus 53 G~~~~l~~ll~~~-~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 116 (294)
|..++|...|..+ .....+++-.+||+.||||.+-.+++.|+..- .|=+-.||||.-.+
T Consensus 167 ~~a~~fI~al~~lIqrL~VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWM 226 (640)
T PF06874_consen 167 GRADEFIIALSELIQRLAVDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWM 226 (640)
T ss_pred CcHHHHHHHHHHHHHHHhhhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHH
Confidence 3444444433321 22345899999999999999999999997652 47788999997654
No 68
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.00 E-value=4e-05 Score=66.16 Aligned_cols=70 Identities=10% Similarity=0.056 Sum_probs=43.5
Q ss_pred CCccEeecCCCCHH-----------HHHHHHH-hCCCCCCceEEEeCCeecCCCCc---HHHHHHHHHhhhhCCCcEEEe
Q 022658 43 SPVTVCGDIHGQFH-----------DLMKLFQ-TGGHVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARYPANITLL 107 (294)
Q Consensus 43 ~~i~viGDiHG~~~-----------~l~~ll~-~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~p~~v~~l 107 (294)
.++.+++|+|-... ...+.++ .+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996322 1122222 23334568899999999976653 444444433322223348999
Q ss_pred CCCCc
Q 022658 108 RGNHE 112 (294)
Q Consensus 108 rGNHE 112 (294)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 69
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.99 E-value=5.7e-05 Score=68.91 Aligned_cols=69 Identities=19% Similarity=0.167 Sum_probs=42.7
Q ss_pred CCccEeecCCCC----HHHHHHHHHhCCCCCCceEEEeCCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 43 SPVTVCGDIHGQ----FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 43 ~~i~viGDiHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
-+++|+||.|.. ...+.++.+. ....+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 468999999952 3333333332 24567889999999544322 223344444433444 8899999998
Q ss_pred hh
Q 022658 114 RQ 115 (294)
Q Consensus 114 ~~ 115 (294)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 64
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.90 E-value=2.2e-05 Score=73.72 Aligned_cols=72 Identities=21% Similarity=0.260 Sum_probs=48.5
Q ss_pred CCccEeecCC-C-----------CHHHHHHHHHhCCCCCCceEEEeCCeecCC-CCcHHHHHHHHH----hhhhCCCcEE
Q 022658 43 SPVTVCGDIH-G-----------QFHDLMKLFQTGGHVPETNYIFMGDFVDRG-YNSLEVFTILLL----LKARYPANIT 105 (294)
Q Consensus 43 ~~i~viGDiH-G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~----l~~~~p~~v~ 105 (294)
+|++.+||+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. +-...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 4 123455555555555668999999999985 445555444433 1112234699
Q ss_pred EeCCCCchh
Q 022658 106 LLRGNHESR 114 (294)
Q Consensus 106 ~lrGNHE~~ 114 (294)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 71
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.90 E-value=7.8e-05 Score=62.16 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=30.0
Q ss_pred CCCceEEEeCCeecCCCCc-HHHH-HHHHHhhhh---C-CCcEEEeCCCCchh
Q 022658 68 VPETNYIFMGDFVDRGYNS-LEVF-TILLLLKAR---Y-PANITLLRGNHESR 114 (294)
Q Consensus 68 ~~~~~~vfLGD~vDrG~~s-~evl-~~l~~l~~~---~-p~~v~~lrGNHE~~ 114 (294)
...+.++++||++|.+... .+.. ..+..++.. . +..+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 4568999999999987642 2221 222233222 1 23599999999974
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.78 E-value=4.1e-05 Score=66.56 Aligned_cols=72 Identities=21% Similarity=0.237 Sum_probs=48.4
Q ss_pred CccEeecCC-CCH--------------HHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHH----HHHHHhhhhCCCcE
Q 022658 44 PVTVCGDIH-GQF--------------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF----TILLLLKARYPANI 104 (294)
Q Consensus 44 ~i~viGDiH-G~~--------------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl----~~l~~l~~~~p~~v 104 (294)
|++.++|+| |.. ..+.++++.+.....+.+|+.||++|....+.+.+ ..+.+++. ..-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 578999999 321 23566666655556678999999999876554433 33333321 13359
Q ss_pred EEeCCCCchhhh
Q 022658 105 TLLRGNHESRQL 116 (294)
Q Consensus 105 ~~lrGNHE~~~~ 116 (294)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999998653
No 73
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.75 E-value=0.00069 Score=55.39 Aligned_cols=153 Identities=18% Similarity=0.275 Sum_probs=100.0
Q ss_pred ccEeecCCC--CHHHHHHHHHhCCCCCC-ceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcC
Q 022658 45 VTVCGDIHG--QFHDLMKLFQTGGHVPE-TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYG 121 (294)
Q Consensus 45 i~viGDiHG--~~~~l~~ll~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 121 (294)
+.++||+|= ...+|-.-|+++=.|.+ .+++++|++. |.|.+++|..+. +.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 578999984 34455555555545544 7899999976 899999998886 3599999977653
Q ss_pred ChHHHHHHhcCcchhhhhhhhhcccceeEEE---eceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC
Q 022658 122 FYDECQRKYGNANAWRYCTDVFDYLTLSAII---DGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED 198 (294)
Q Consensus 122 f~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i---~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~ 198 (294)
.+| |..-++ .-|+-++||-- -+=|+||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhq--------------------------ViP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQ--------------------------VIPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcE--------------------------eecCCCH--
Confidence 122 333222 24799999931 1235552
Q ss_pred CCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCCCccCCCcEEEEEEcCC-Cc
Q 022658 199 IETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNEN-MV 277 (294)
Q Consensus 199 ~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~-~~ 277 (294)
+++.-..++.+++..+-|||+.-+.|+. +|+. |..|.-+ .||.=..+.+ ..
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~---eg~f---fvnPGSa-----TGAfn~~~t~~~~ 148 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH---EGKF---FVNPGSA-----TGAFNVSDTDIIV 148 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe---CCcE---EeCCCcc-----cCCCcccccCCCC
Confidence 5566667788999999999999888877 6653 5555433 2332233333 56
Q ss_pred eeEEEEecCceeee
Q 022658 278 RYPACWHAGVCVCV 291 (294)
Q Consensus 278 ~~~~~~~~~~~~~~ 291 (294)
+||..+.-+-.+|+
T Consensus 149 PSFvLmDiqg~~~v 162 (183)
T KOG3325|consen 149 PSFVLMDIQGSTVV 162 (183)
T ss_pred CceEEEEecCCEEE
Confidence 77777666655554
No 74
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.69 E-value=0.00013 Score=66.07 Aligned_cols=71 Identities=20% Similarity=0.326 Sum_probs=46.0
Q ss_pred ccEeecCCCCHHHHHHHHHhC---CCCCCceEEEeCCeecCCCCc-HHHH----------HHHHHh--hhhCCCcEEEeC
Q 022658 45 VTVCGDIHGQFHDLMKLFQTG---GHVPETNYIFMGDFVDRGYNS-LEVF----------TILLLL--KARYPANITLLR 108 (294)
Q Consensus 45 i~viGDiHG~~~~l~~ll~~~---~~~~~~~~vfLGD~vDrG~~s-~evl----------~~l~~l--~~~~p~~v~~lr 108 (294)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+.+ ++..-+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999997755433 335678999999996544322 2222 121111 223455589999
Q ss_pred CCCchhh
Q 022658 109 GNHESRQ 115 (294)
Q Consensus 109 GNHE~~~ 115 (294)
||||...
T Consensus 81 GNHE~~~ 87 (262)
T cd00844 81 GNHEASN 87 (262)
T ss_pred CCCCCHH
Confidence 9999753
No 75
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.65 E-value=0.00014 Score=64.35 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=44.6
Q ss_pred CCccEeecCC-CCHHH----------------HHHHHHhCCCCCCceEEEeCCeecCCCC---cHHHHHHHHHhhhhCCC
Q 022658 43 SPVTVCGDIH-GQFHD----------------LMKLFQTGGHVPETNYIFMGDFVDRGYN---SLEVFTILLLLKARYPA 102 (294)
Q Consensus 43 ~~i~viGDiH-G~~~~----------------l~~ll~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~l~~~~p~ 102 (294)
.+..+|+|+| |.-.. +.++.+.+...+.+.+|++||+.+.... ..++.+++.++. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 6799999999 54332 2223333334456899999999975554 223344444432 3
Q ss_pred cEEEeCCCCchhh
Q 022658 103 NITLLRGNHESRQ 115 (294)
Q Consensus 103 ~v~~lrGNHE~~~ 115 (294)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 6999999999754
No 76
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.52 E-value=0.00022 Score=60.26 Aligned_cols=57 Identities=23% Similarity=0.251 Sum_probs=34.5
Q ss_pred HHHHHHhCCCCCCceEEEeCCeecCCCCcH-HHHHH--HHHhhhhCCCcEEEeCCCCchhh
Q 022658 58 LMKLFQTGGHVPETNYIFMGDFVDRGYNSL-EVFTI--LLLLKARYPANITLLRGNHESRQ 115 (294)
Q Consensus 58 l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~--l~~l~~~~p~~v~~lrGNHE~~~ 115 (294)
+.++.+.+...+.+.+|++||+++....+. +.... +..+. ..+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccch
Confidence 344444444456689999999998654322 22221 12222 23346999999999854
No 77
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.52 E-value=0.0013 Score=57.73 Aligned_cols=215 Identities=13% Similarity=0.103 Sum_probs=94.2
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHH--------------------------HHHHH
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVF--------------------------TILLL 95 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~ 95 (294)
..++.+++|.||+++.+.++.+.+.-...|-++|+||++-....+.+-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3568999999999999999998876667799999999985443332222 33334
Q ss_pred hhhhCCCcEEEeCCCCchhhhhhhcCChHHHHH-HhcCcchhhhhhhhhcccce-eEEEe-ceEEEecCCCC---CCCCC
Q 022658 96 LKARYPANITLLRGNHESRQLTQVYGFYDECQR-KYGNANAWRYCTDVFDYLTL-SAIID-GTVLCVHGGLS---PDIRT 169 (294)
Q Consensus 96 l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~-~~~~~~~~~~~~~~~~~LP~-~~~i~-~~~l~vHgGi~---~~~~~ 169 (294)
|.. .+-.+++|+||||..... |..+... ++-...+. -..+.|...+- ..+++ +.-+..++-.. ..++.
T Consensus 85 L~~-~~~p~~~vPG~~Dap~~~----~lr~a~~~e~v~p~~~-~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~ 158 (255)
T PF14582_consen 85 LGE-LGVPVFVVPGNMDAPERF----FLREAYNAEIVTPHIH-NVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPA 158 (255)
T ss_dssp HHC-C-SEEEEE--TTS-SHHH----HHHHHHHCCCC-TTEE-E-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEH
T ss_pred HHh-cCCcEEEecCCCCchHHH----HHHHHhccceecccee-eeeeeecccCCcEEEEecCccccCCCccccccccchH
Confidence 433 334589999999985422 1111111 11010111 11111222221 11110 11122222111 00112
Q ss_pred HHHHHhhhccCCCCCCCCccccccCCCCCCCCCccCCCCCc-cccCHHHHHHHHHhCCCcEEEeccceeecCeeEEecCC
Q 022658 170 IDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAG-WLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDK 248 (294)
Q Consensus 170 ~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~~~~~rg~~-~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~ 248 (294)
++....++...+..+. ..--++..-|+ -+.+ ..-|+.+++++.++.+-+++++||-....|-+. . |
T Consensus 159 weaey~lk~l~elk~~-r~IlLfhtpPd---------~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~-l--G 225 (255)
T PF14582_consen 159 WEAEYSLKFLRELKDY-RKILLFHTPPD---------LHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHGKES-L--G 225 (255)
T ss_dssp HHHHHHHGGGGGCTSS-EEEEEESS-BT---------BCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE--EE-E--T
T ss_pred HHHHHHHHHHHhcccc-cEEEEEecCCc---------cCCCcccccHHHHHHHHHhcCCcEEEecccccchhhHH-h--C
Confidence 2222222221111000 00111222220 1122 356889999999999999999999988777665 3 5
Q ss_pred eEEEEEcCCCCCccCCCcEEEEEEcCCCceeE
Q 022658 249 GLVTVWSAPNYCYRCGNVASILSFNENMVRYP 280 (294)
Q Consensus 249 ~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~ 280 (294)
+.+-|.-.+-+.| .-|++.+.+. ++.+
T Consensus 226 ~TlVVNPGsL~~G----~yAvI~l~~~-~v~~ 252 (255)
T PF14582_consen 226 KTLVVNPGSLAEG----DYAVIDLEQD-KVEF 252 (255)
T ss_dssp TEEEEE--BGGGT----EEEEEETTTT-EEEE
T ss_pred CEEEecCcccccC----ceeEEEeccc-cccc
Confidence 5444443222212 4588877644 4444
No 78
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.48 E-value=0.00026 Score=67.87 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=42.8
Q ss_pred CCCccEeecCCCC------------HHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHH
Q 022658 42 NSPVTVCGDIHGQ------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLL 95 (294)
Q Consensus 42 ~~~i~viGDiHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 95 (294)
.+||++++|+|-- +..|.++++.+.....+-+|+.||+.|++.-|.+++..+++
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 4689999999942 45677888877666789999999999999988887655443
No 79
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.39 E-value=0.00027 Score=67.98 Aligned_cols=72 Identities=22% Similarity=0.235 Sum_probs=47.7
Q ss_pred CCccEeecCCC-C-------HHH----HHHHHHhCCCCCCceEEEeCCeecCCCCcHHH----HHHHHHhhhhCCCcEEE
Q 022658 43 SPVTVCGDIHG-Q-------FHD----LMKLFQTGGHVPETNYIFMGDFVDRGYNSLEV----FTILLLLKARYPANITL 106 (294)
Q Consensus 43 ~~i~viGDiHG-~-------~~~----l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~l~~~~p~~v~~ 106 (294)
++++.++|+|- . ..+ +..+++.+.....+.+|+.||++|++..+... ..++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 57899999993 2 111 33444444455678999999999998655433 2344455432 335999
Q ss_pred eCCCCchhh
Q 022658 107 LRGNHESRQ 115 (294)
Q Consensus 107 lrGNHE~~~ 115 (294)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999764
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.34 E-value=0.00032 Score=62.55 Aligned_cols=68 Identities=22% Similarity=0.241 Sum_probs=40.2
Q ss_pred cEeecCC--CCH---HHHHHHHHhC-CCC----CCceEEEeCCeecCCCC------------c----HHHHHHHHHhhhh
Q 022658 46 TVCGDIH--GQF---HDLMKLFQTG-GHV----PETNYIFMGDFVDRGYN------------S----LEVFTILLLLKAR 99 (294)
Q Consensus 46 ~viGDiH--G~~---~~l~~ll~~~-~~~----~~~~~vfLGD~vDrG~~------------s----~evl~~l~~l~~~ 99 (294)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... . .++..++.+|..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 5799999 331 2223444433 221 23789999999997310 0 123444444442
Q ss_pred CCCcEEEeCCCCchhh
Q 022658 100 YPANITLLRGNHESRQ 115 (294)
Q Consensus 100 ~p~~v~~lrGNHE~~~ 115 (294)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 235999999999753
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.29 E-value=0.00047 Score=63.12 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=51.1
Q ss_pred CCccEeecCCCCHHH--HHHHHHhCCCCCCceEEEeCCeecC--CCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhh
Q 022658 43 SPVTVCGDIHGQFHD--LMKLFQTGGHVPETNYIFMGDFVDR--GYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (294)
Q Consensus 43 ~~i~viGDiHG~~~~--l~~ll~~~~~~~~~~~vfLGD~vDr--G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (294)
-+|+-++|+|-.... ..+.+........+-+++.||++|+ -+....+...+..|+.. -.++++.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~--~gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAP--LGVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhcc--CCEEEEeccccccc
Confidence 469999999987554 2334444433334899999999995 44455577778778755 45999999998764
No 82
>PLN02533 probable purple acid phosphatase
Probab=97.26 E-value=0.0027 Score=61.54 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=43.5
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCc---HHHHHHHHHhhhhCCCcEEEeCCCCchhh
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARYPANITLLRGNHESRQ 115 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (294)
+-+++++||+|-. ......++.+.....+-++++||+++-+... -+-.+++..+....| ++.++||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4579999999632 2223344444444567889999999754332 112333444433444 788999999863
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.16 E-value=0.017 Score=52.20 Aligned_cols=32 Identities=3% Similarity=-0.011 Sum_probs=25.8
Q ss_pred ccCHHHHHHHHHhCCCcEEEeccceeecCeeEEe
Q 022658 212 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 245 (294)
Q Consensus 212 ~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~ 245 (294)
+-..+...+.|+..+-.+|+-||.+ ++.+..+
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 3577899999999999999999997 4555544
No 84
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.14 E-value=0.00019 Score=68.84 Aligned_cols=244 Identities=11% Similarity=-0.021 Sum_probs=159.2
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCccccC----CCccEeecCCCCHHHHHHHHHhCCCCC-CceEEEeCCeecCCCCcHH
Q 022658 14 QHLLEDELQLLCEYVKEILIEESNVQPVN----SPVTVCGDIHGQFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYNSLE 88 (294)
Q Consensus 14 ~~~~~~~~~~l~~~~~~i~~~ep~~l~~~----~~i~viGDiHG~~~~l~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~e 88 (294)
+.|...++..+++.+.+++..+|+..... .-.+.++|.||.+.|+.++++.- |. ..-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 45777888999999999999999876653 23789999999999999998864 32 3568899999999999999
Q ss_pred HHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchhhhhhhhhcccc-eeEEEeceEEEecCCCCC--
Q 022658 89 VFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLT-LSAIIDGTVLCVHGGLSP-- 165 (294)
Q Consensus 89 vl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~~~~LP-~~~~i~~~~l~vHgGi~~-- 165 (294)
.+..+...+...|....+.|++||...+-..++|..+....++....--+..-.+..++ +...+.+.++=-| -+..
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~~i~~~y~g~~le~~-kvt~e~ 169 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMDLIESDYSGPVLEDH-KVTLEF 169 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccccccccccccCCcccccc-hhhHHH
Confidence 99999999999999999999999999988888888777776644211111101112222 3333333222222 1100
Q ss_pred ----------------C--CCCHHHHHhhhccCCCCC-CCCccccccCCCCCC-CCCccCCCCCccccCHHHHHHHHHhC
Q 022658 166 ----------------D--IRTIDQIRVIERNCEIPH-EGPFCDLMWSDPEDI-ETWAVSPRGAGWLFGSRVTSEFNHIN 225 (294)
Q Consensus 166 ----------------~--~~~~~~i~~i~r~~~~~~-~~~~~~llWsdp~~~-~~~~~~~rg~~~~fg~~~~~~fl~~~ 225 (294)
. ..-+++...+.+....+- ...-.+..|+.+.+. ..|....++.+...+++....|+...
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 0 001111111111111110 113457788888764 34556667777777788888888888
Q ss_pred CCcEEEeccceee------------cCeeEEe--cCCeEEEEEcCCCCC
Q 022658 226 NLDLVCRAHQLVQ------------EGLKYMF--QDKGLVTVWSAPNYC 260 (294)
Q Consensus 226 ~~~~ivrgH~~~~------------~G~~~~~--~~~~~itvfSa~~y~ 260 (294)
+.+-+.+.+.-+. .+|.... ..+.++++|+.+.++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~ 298 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEV 298 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcch
Confidence 8887777775532 2222221 233478888888776
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.97 E-value=0.0015 Score=56.41 Aligned_cols=48 Identities=23% Similarity=0.400 Sum_probs=35.1
Q ss_pred CCCCceEEEeCCeecCCCCc--HHHHHHHHHhhhhCC----CcEEEeCCCCchh
Q 022658 67 HVPETNYIFMGDFVDRGYNS--LEVFTILLLLKARYP----ANITLLRGNHESR 114 (294)
Q Consensus 67 ~~~~~~~vfLGD~vDrG~~s--~evl~~l~~l~~~~p----~~v~~lrGNHE~~ 114 (294)
....+.++|+||++|.|+.+ .+..+.+.+++..++ ..++.|.||||.-
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 34568999999999999964 336666666654432 3688999999974
No 86
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.92 E-value=0.002 Score=54.55 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=32.1
Q ss_pred CCCCCceEEEeCCeecCCCCcH--H---HHHHHHHhhhhC-----CCcEEEeCCCCchhh
Q 022658 66 GHVPETNYIFMGDFVDRGYNSL--E---VFTILLLLKARY-----PANITLLRGNHESRQ 115 (294)
Q Consensus 66 ~~~~~~~~vfLGD~vDrG~~s~--e---vl~~l~~l~~~~-----p~~v~~lrGNHE~~~ 115 (294)
...+.+.+|++||++|.+.... + .+..+.++.... +-.++.++||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3446689999999999887532 2 233333322111 345999999999864
No 87
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.82 E-value=0.0016 Score=58.05 Aligned_cols=66 Identities=24% Similarity=0.258 Sum_probs=44.0
Q ss_pred CccEeecCCCCH---------HHHHHHHHhCCCC-CCceEEEeCCeecCCCCcH-----HHHHHHHHhhhhCCCcEEEeC
Q 022658 44 PVTVCGDIHGQF---------HDLMKLFQTGGHV-PETNYIFMGDFVDRGYNSL-----EVFTILLLLKARYPANITLLR 108 (294)
Q Consensus 44 ~i~viGDiHG~~---------~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~-----evl~~l~~l~~~~p~~v~~lr 108 (294)
+++.++|+||.+ ..+.+++++.... ++..++..||+++.++.+. .+++.+.++. . -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g---~--d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG---Y--DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC---C--CEEee
Confidence 578999999886 5666777765443 3446677899999877643 4555554443 2 23456
Q ss_pred CCCchh
Q 022658 109 GNHESR 114 (294)
Q Consensus 109 GNHE~~ 114 (294)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 88
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.78 E-value=0.0037 Score=51.83 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=79.6
Q ss_pred cEeecCCCCHHHHHHHHHhCC--CCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCCh
Q 022658 46 TVCGDIHGQFHDLMKLFQTGG--HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFY 123 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~ 123 (294)
.|+||+||+++.+.+-++.+. ..+-+-++++||+..-...+-+.-. ...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~-y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEA-YKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHH-HhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999988777642 2345889999999865554433333 33334456767999999998
Q ss_pred HHHHHHhcCcchhhhhhhhhcccceeEEEeceEEEecCCCCCCC-CCHHHHHhhhccCCCCCCCCccccccCCCCCCCCC
Q 022658 124 DECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDI-RTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETW 202 (294)
Q Consensus 124 ~e~~~~~~~~~~~~~~~~~~~~LP~~~~i~~~~l~vHgGi~~~~-~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~~~~~ 202 (294)
+-.+|++|.= |.- ...++. ..+
T Consensus 69 -----------------------------~~DILlTh~w--P~gi~~~~~~-------------------~~~------- 91 (150)
T cd07380 69 -----------------------------GVDILLTSEW--PKGISKLSKV-------------------PFE------- 91 (150)
T ss_pred -----------------------------CCCEEECCCC--chhhhhhCCC-------------------ccc-------
Confidence 3468999983 321 101100 000
Q ss_pred ccCCCCCccccCHHHHHHHHHhCCCcEEEecccee
Q 022658 203 AVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLV 237 (294)
Q Consensus 203 ~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~ 237 (294)
..+..-|...+++++++..-++.+.||...
T Consensus 92 -----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 -----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012345788999999999999999999764
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.66 E-value=0.0046 Score=59.02 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=51.2
Q ss_pred CCccEeecCCCC-------------HHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHh-hhhC--CCcEEE
Q 022658 43 SPVTVCGDIHGQ-------------FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLL-KARY--PANITL 106 (294)
Q Consensus 43 ~~i~viGDiHG~-------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l-~~~~--p~~v~~ 106 (294)
+|+..++|.|=- +..|..+++.+.....|-+|+.||+.|++.-|.+++..+... +... .=.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999844 444555566655556689999999999988787765544332 2221 125999
Q ss_pred eCCCCchhhh
Q 022658 107 LRGNHESRQL 116 (294)
Q Consensus 107 lrGNHE~~~~ 116 (294)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999998653
No 90
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.61 E-value=0.007 Score=50.08 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=43.3
Q ss_pred ccEeecCCCC------------HHHHHHH-HHhC--CCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCC
Q 022658 45 VTVCGDIHGQ------------FHDLMKL-FQTG--GHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRG 109 (294)
Q Consensus 45 i~viGDiHG~------------~~~l~~l-l~~~--~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrG 109 (294)
++.+||.|=. .+....+ |... -..|++.+.+|||+.-.--...+..+++.+| |.++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 6788888853 3333332 2221 1347889999999985444444555555444 567999999
Q ss_pred CCchhh
Q 022658 110 NHESRQ 115 (294)
Q Consensus 110 NHE~~~ 115 (294)
|||..-
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 999754
No 91
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.50 E-value=0.0063 Score=53.89 Aligned_cols=72 Identities=24% Similarity=0.321 Sum_probs=45.0
Q ss_pred cCCCccEeecCCCCHHHHH----------------HHHH-hCCCCCCceEEEeCCeecCCCC-----cHHHHHHHHHhhh
Q 022658 41 VNSPVTVCGDIHGQFHDLM----------------KLFQ-TGGHVPETNYIFMGDFVDRGYN-----SLEVFTILLLLKA 98 (294)
Q Consensus 41 ~~~~i~viGDiHG~~~~l~----------------~ll~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~ 98 (294)
...+..|++|+|=-++... +.+. .+.....+++|++||+-.-.+. ..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996554433 2222 1223355799999999643322 2344444444443
Q ss_pred hCCCcEEEeCCCCchhh
Q 022658 99 RYPANITLLRGNHESRQ 115 (294)
Q Consensus 99 ~~p~~v~~lrGNHE~~~ 115 (294)
. .++.++||||...
T Consensus 98 ~---evi~i~GNHD~~i 111 (235)
T COG1407 98 R---EVIIIRGNHDNGI 111 (235)
T ss_pred C---cEEEEeccCCCcc
Confidence 2 4999999999864
No 92
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.38 E-value=0.0084 Score=51.76 Aligned_cols=66 Identities=15% Similarity=0.170 Sum_probs=42.6
Q ss_pred eecCCCCHHHHHHHHHhCC-CCCCceEEEeCCeecCCCCcHH-HHHHHHHhhhhC---------------------CCcE
Q 022658 48 CGDIHGQFHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSLE-VFTILLLLKARY---------------------PANI 104 (294)
Q Consensus 48 iGDiHG~~~~l~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~---------------------p~~v 104 (294)
-=|++|+=.-|.+.++.+- ....+.++||||++|.|--+-+ -.....+.+..+ ...+
T Consensus 22 rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~ 101 (193)
T cd08164 22 RLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPL 101 (193)
T ss_pred eehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceE
Confidence 3466777666777777653 3456889999999998754322 223333333322 1357
Q ss_pred EEeCCCCch
Q 022658 105 TLLRGNHES 113 (294)
Q Consensus 105 ~~lrGNHE~ 113 (294)
+.|+||||.
T Consensus 102 i~V~GNHDI 110 (193)
T cd08164 102 INIAGNHDV 110 (193)
T ss_pred EEECCcccC
Confidence 889999998
No 93
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.31 E-value=0.0069 Score=46.26 Aligned_cols=39 Identities=13% Similarity=0.127 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcccc
Q 022658 3 LDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPV 41 (294)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~ 41 (294)
+..|+++|++++.++...+..|+.++.++|+++|+++++
T Consensus 57 v~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 689999999999999999999999999999999999874
No 94
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.28 E-value=0.0049 Score=55.99 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=40.1
Q ss_pred CccEeecCCCCH----------------HHHHHHHHhCCCCCCceEEE-eCCeecCCCCc-----------HHHHHHHHH
Q 022658 44 PVTVCGDIHGQF----------------HDLMKLFQTGGHVPETNYIF-MGDFVDRGYNS-----------LEVFTILLL 95 (294)
Q Consensus 44 ~i~viGDiHG~~----------------~~l~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 95 (294)
+|+.++|+||.+ ..+..++++......+.+++ .||+++..+.+ ..+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 477899999986 33556666554333344444 79999866522 234555555
Q ss_pred hhhhCCCcEEEeCCCCch
Q 022658 96 LKARYPANITLLRGNHES 113 (294)
Q Consensus 96 l~~~~p~~v~~lrGNHE~ 113 (294)
+. ++ ++..||||.
T Consensus 82 ~g---~d--~~~lGNHe~ 94 (277)
T cd07410 82 LG---YD--AGTLGNHEF 94 (277)
T ss_pred cC---CC--EEeecccCc
Confidence 43 22 556699995
No 95
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.26 E-value=0.58 Score=42.27 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=32.5
Q ss_pred cEEEeccceeecCeeEEe-cCCeEEEEEcCCCCCccCCCcEEEEEEc-CCCceeEEEE
Q 022658 228 DLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFN-ENMVRYPACW 283 (294)
Q Consensus 228 ~~ivrgH~~~~~G~~~~~-~~~~~itvfSa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 283 (294)
+.++.||++. .|.+..- .+++-+.+.|.|.|.. .|.++.+| ++++++.+.|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 5688999997 4555543 1367788899999964 33333333 3666666554
No 96
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.14 E-value=0.52 Score=45.86 Aligned_cols=205 Identities=17% Similarity=0.193 Sum_probs=104.5
Q ss_pred CccEeecCCC-CH----HHHHHHHHhCCC----CCCceEEE-eCCeecC-CC-----------CcHHHHHHHHHhhhhCC
Q 022658 44 PVTVCGDIHG-QF----HDLMKLFQTGGH----VPETNYIF-MGDFVDR-GY-----------NSLEVFTILLLLKARYP 101 (294)
Q Consensus 44 ~i~viGDiHG-~~----~~l~~ll~~~~~----~~~~~~vf-LGD~vDr-G~-----------~s~evl~~l~~l~~~~p 101 (294)
.++.++|+|= .. +.+...++-++- .+.-+|+. .||.||. |- +..+-++.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4899999995 22 222233333222 22335555 7899994 22 22344555555555556
Q ss_pred C--cEEEeCCCCchhhhhhhc-CChHHHHHHhcCcchhhhhhhhhcccceeEEE-eceEEEecCCCCCCCCCHHHHHhhh
Q 022658 102 A--NITLLRGNHESRQLTQVY-GFYDECQRKYGNANAWRYCTDVFDYLTLSAII-DGTVLCVHGGLSPDIRTIDQIRVIE 177 (294)
Q Consensus 102 ~--~v~~lrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~~~~~LP~~~~i-~~~~l~vHgGi~~~~~~~~~i~~i~ 177 (294)
. .+++.+||||..-....- .+.......|. ..+-.|=.=|....+ +..++..||= +++++-..-
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~------~~n~~~v~NP~~~~l~G~~vL~~hG~------sidDii~~v 374 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSLFS------LNNLLFVSNPALVSLHGVDVLIYHGR------SIDDIIKLV 374 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhccccc------ccceEecCCCcEEEECCEEEEEecCC------CHHHHHhhC
Confidence 5 688899999986433211 22222222221 111112222333333 4568888983 333332211
Q ss_pred ccCCC--CC------------CCCccccccCCCCCCCCCccCCCCCccccCHHHHHHHHHhCCCcEEEeccceeecCeeE
Q 022658 178 RNCEI--PH------------EGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKY 243 (294)
Q Consensus 178 r~~~~--~~------------~~~~~~llWsdp~~~~~~~~~~rg~~~~fg~~~~~~fl~~~~~~~ivrgH~~~~~G~~~ 243 (294)
..... +. ....-+-+|.-|.....+.. + ---++...||++. .|+..
T Consensus 375 P~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~kD~lVI--------------e-----evPDv~~~Ghvh~-~g~~~ 434 (481)
T COG1311 375 PGADYDSPLKAMEELLKRRHLAPTYGGTLPIAPETKDYLVI--------------E-----EVPDVFHTGHVHK-FGTGV 434 (481)
T ss_pred CCCCccchHHHHHHHHHhcccCCCCCCccccccCCcCceee--------------c-----cCCcEEEEccccc-cceeE
Confidence 11100 00 01123344544433221111 0 1246789999998 68888
Q ss_pred EecCCeEEEEEcCCCCCccCCCcEEEEEEcCC-CceeEEEEec
Q 022658 244 MFQDKGLVTVWSAPNYCYRCGNVASILSFNEN-MVRYPACWHA 285 (294)
Q Consensus 244 ~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~-~~~~~~~~~~ 285 (294)
.. +++++..+|.+.+.. .+-++.|+.. +.+.+..|..
T Consensus 435 y~-gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 435 YE-GVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred Ee-ccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 77 778999888887743 4455556544 4555555554
No 97
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.52 E-value=0.028 Score=50.69 Aligned_cols=69 Identities=20% Similarity=0.254 Sum_probs=39.6
Q ss_pred CccEeecCCCC--H--HHHHHHHH-hCCCCCCceEEEeCCee-cCCCCcH------HHHHHHHH-hhhhCCCcEEEeCCC
Q 022658 44 PVTVCGDIHGQ--F--HDLMKLFQ-TGGHVPETNYIFMGDFV-DRGYNSL------EVFTILLL-LKARYPANITLLRGN 110 (294)
Q Consensus 44 ~i~viGDiHG~--~--~~l~~ll~-~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-l~~~~p~~v~~lrGN 110 (294)
+++++||.=.. . ..+.+.+. .+...+.+-+|++||++ +-|..+. +.+..++. +... -.++.++||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ--VPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhc--CCeEEecCC
Confidence 57899998763 1 23333333 22334567899999997 5554221 22222222 2212 248999999
Q ss_pred Cchh
Q 022658 111 HESR 114 (294)
Q Consensus 111 HE~~ 114 (294)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 98
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.44 E-value=0.023 Score=51.02 Aligned_cols=65 Identities=20% Similarity=0.226 Sum_probs=40.9
Q ss_pred CccEeecCCCCH----------HHHHHHHHhCCCCCCceEEEeCCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEeC
Q 022658 44 PVTVCGDIHGQF----------HDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLLR 108 (294)
Q Consensus 44 ~i~viGDiHG~~----------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lr 108 (294)
+++.++|+||++ ..+..++++....+..-++..||+++..+.+ ..+++.+-.+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 477899999974 4456666665433555666699999876533 234444444332 23 456
Q ss_pred CCCch
Q 022658 109 GNHES 113 (294)
Q Consensus 109 GNHE~ 113 (294)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99995
No 99
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.71 E-value=0.044 Score=50.19 Aligned_cols=65 Identities=20% Similarity=0.295 Sum_probs=42.3
Q ss_pred CccEeecCCCCHH--------------HHHHHHHhCCC-CCCceEEEeCCeecCCCC-c-----HHHHHHHHHhhhhCCC
Q 022658 44 PVTVCGDIHGQFH--------------DLMKLFQTGGH-VPETNYIFMGDFVDRGYN-S-----LEVFTILLLLKARYPA 102 (294)
Q Consensus 44 ~i~viGDiHG~~~--------------~l~~ll~~~~~-~~~~~~vfLGD~vDrG~~-s-----~evl~~l~~l~~~~p~ 102 (294)
+|+.++|+||++. .+..+++.... .+..-++..||+++..+. + ..+++.+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 4778999999854 35566665543 234566669999976654 2 2456666666543
Q ss_pred cEEEeCCCCch
Q 022658 103 NITLLRGNHES 113 (294)
Q Consensus 103 ~v~~lrGNHE~ 113 (294)
.+..||||.
T Consensus 79 --a~t~GNHef 87 (288)
T cd07412 79 --ASAVGNHEF 87 (288)
T ss_pred --eeeeccccc
Confidence 356699996
No 100
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.06 E-value=0.1 Score=44.40 Aligned_cols=44 Identities=27% Similarity=0.331 Sum_probs=29.8
Q ss_pred CCCceEEEeCCee--cCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhh
Q 022658 68 VPETNYIFMGDFV--DRGYNSLEVFTILLLLKARYPANITLLRGNHESRQ 115 (294)
Q Consensus 68 ~~~~~~vfLGD~v--DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 115 (294)
.+++.++.-||+- -|=+...+=+.++-.| |..-+++|||||...
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 3567777789984 2334444455555444 777899999999864
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=93.65 E-value=0.13 Score=47.05 Aligned_cols=72 Identities=21% Similarity=0.311 Sum_probs=44.6
Q ss_pred CccEeecCCCC---HHHHHHHHHhCCC--CCCceEEEeCCeecCCCCcH--H------HHHHHHHhhhhCCC-cEEEeCC
Q 022658 44 PVTVCGDIHGQ---FHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSL--E------VFTILLLLKARYPA-NITLLRG 109 (294)
Q Consensus 44 ~i~viGDiHG~---~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~--e------vl~~l~~l~~~~p~-~v~~lrG 109 (294)
+..-.|+-. | ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|. .++.+.|
T Consensus 39 ~~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~G 117 (296)
T cd00842 39 PAGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALG 117 (296)
T ss_pred CCCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCC
Confidence 344566664 4 4555666665543 36788999999998876431 1 12233334444443 6999999
Q ss_pred CCchhhh
Q 022658 110 NHESRQL 116 (294)
Q Consensus 110 NHE~~~~ 116 (294)
|||....
T Consensus 118 NHD~~p~ 124 (296)
T cd00842 118 NHDSYPV 124 (296)
T ss_pred CCCCCcc
Confidence 9998653
No 102
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.40 E-value=0.11 Score=46.84 Aligned_cols=64 Identities=17% Similarity=0.197 Sum_probs=36.6
Q ss_pred ccEeecCCCCH----------------------HHHHHHHHhCCCC-CCceE-EEeCCeecCCCCc-----HHHHHHHHH
Q 022658 45 VTVCGDIHGQF----------------------HDLMKLFQTGGHV-PETNY-IFMGDFVDRGYNS-----LEVFTILLL 95 (294)
Q Consensus 45 i~viGDiHG~~----------------------~~l~~ll~~~~~~-~~~~~-vfLGD~vDrG~~s-----~evl~~l~~ 95 (294)
++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+ ..++..+.+
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 56778888864 3344555554333 33334 5589999876543 234454444
Q ss_pred hhhhCCCcEEEeCCCCchh
Q 022658 96 LKARYPANITLLRGNHESR 114 (294)
Q Consensus 96 l~~~~p~~v~~lrGNHE~~ 114 (294)
+. -.+ +. ||||..
T Consensus 83 ~g----~da-~~-GNHefd 95 (264)
T cd07411 83 LG----VDA-MV-GHWEFT 95 (264)
T ss_pred hC----CeE-Ee-cccccc
Confidence 33 223 33 999963
No 103
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.35 E-value=0.14 Score=46.63 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=38.6
Q ss_pred CccEeecCCCCH---------------------HHHHHHHHhCCCC-CCceEEEeCCeecCCCC-----cHHHHHHHHHh
Q 022658 44 PVTVCGDIHGQF---------------------HDLMKLFQTGGHV-PETNYIFMGDFVDRGYN-----SLEVFTILLLL 96 (294)
Q Consensus 44 ~i~viGDiHG~~---------------------~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~l 96 (294)
+++.++|+||++ ..+..+++..... +..-++-.||+++..+. ...+++.+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 367789999864 4455556554332 33344448999987653 23344554444
Q ss_pred hhhCCCcEEEeCCCCchh
Q 022658 97 KARYPANITLLRGNHESR 114 (294)
Q Consensus 97 ~~~~p~~v~~lrGNHE~~ 114 (294)
... .+..||||.-
T Consensus 82 g~D-----~~~lGNHefd 94 (281)
T cd07409 82 GYD-----AMTLGNHEFD 94 (281)
T ss_pred CCC-----EEEecccccc
Confidence 322 3445999963
No 104
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.29 E-value=0.18 Score=48.26 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=34.7
Q ss_pred CCCceEEEeCCeecCCCC--cHHHHHHHHHhhhhCCC----cEEEeCCCCch
Q 022658 68 VPETNYIFMGDFVDRGYN--SLEVFTILLLLKARYPA----NITLLRGNHES 113 (294)
Q Consensus 68 ~~~~~~vfLGD~vDrG~~--s~evl~~l~~l~~~~p~----~v~~lrGNHE~ 113 (294)
...+.++||||++|-|.. .-|--....+++..++. .+..+.||||-
T Consensus 92 lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 92 LKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred cCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 345788889999998876 34455556666666665 78889999996
No 105
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=93.13 E-value=0.11 Score=48.57 Aligned_cols=74 Identities=24% Similarity=0.402 Sum_probs=49.1
Q ss_pred CCccEeecCCCCHHHHHH---HHHhCCCCCCceEEEeCCeec-CCCC---cHHHHHHHHHh---------hhhCCCcEEE
Q 022658 43 SPVTVCGDIHGQFHDLMK---LFQTGGHVPETNYIFMGDFVD-RGYN---SLEVFTILLLL---------KARYPANITL 106 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~---ll~~~~~~~~~~~vfLGD~vD-rG~~---s~evl~~l~~l---------~~~~p~~v~~ 106 (294)
+||.|-|=-||.++.+-+ ..++.|..+.|.++++||+=. |... ++.+=.-...| ...+|=--++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999999999984 455666778899999999842 2221 22221111111 2345656788
Q ss_pred eCCCCchhhh
Q 022658 107 LRGNHESRQL 116 (294)
Q Consensus 107 lrGNHE~~~~ 116 (294)
+-||||.+.-
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999998753
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.05 E-value=0.11 Score=56.62 Aligned_cols=66 Identities=18% Similarity=0.212 Sum_probs=42.0
Q ss_pred CCccEeecCCCCH---HHHHHHHHhCCCCCCceEEE-eCCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 43 SPVTVCGDIHGQF---HDLMKLFQTGGHVPETNYIF-MGDFVDRGYNS-----LEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 43 ~~i~viGDiHG~~---~~l~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
-+|+.++|+||.+ ..+..++++......+.+++ .||+++..+.+ ..+++++.++.. -.+..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 3589999999885 44455555543323344444 89999877644 245555545432 2568999996
No 107
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=92.96 E-value=0.93 Score=43.91 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=27.3
Q ss_pred HHHHHHHHhCCCcEEEeccceeecCeeEEecCCeE
Q 022658 216 RVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGL 250 (294)
Q Consensus 216 ~~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~ 250 (294)
..++..+-++++++++-||.+.-+...... |.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piy-n~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIY-NNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhh-ccee
Confidence 368999999999999999999777665555 5544
No 108
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=92.81 E-value=0.17 Score=45.44 Aligned_cols=56 Identities=21% Similarity=0.181 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHhCCCCC-CceEEEeCCeecCCCC-----cHHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 53 GQFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYN-----SLEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 53 G~~~~l~~ll~~~~~~~-~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
|-+..+..++++..... +.-++..||+++.++. ...+++.+..+.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 44677777777764433 3456668999987653 2456666655542 2557899996
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=90.76 E-value=0.4 Score=43.50 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=49.1
Q ss_pred CCccEeecCCCC--HHHHHHHHHhCCCC-CCceEEEeCCeecCC-CCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 43 SPVTVCGDIHGQ--FHDLMKLFQTGGHV-PETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 43 ~~i~viGDiHG~--~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+||.++|||=|. ...+...|..+... +.+-+|..||....| .-+.++.+.|.++-.. ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 579999999999 56666777665433 346667789998766 3478888888877654 5555 999974
No 110
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=90.69 E-value=2.5 Score=40.52 Aligned_cols=72 Identities=11% Similarity=0.083 Sum_probs=41.3
Q ss_pred CCCccEeecCC-CCHHHHH--HHHHhC-CCCCCceEEEeCCeecCCCCcH------HHHHHHHHhhh--hCCCcEEEeCC
Q 022658 42 NSPVTVCGDIH-GQFHDLM--KLFQTG-GHVPETNYIFMGDFVDRGYNSL------EVFTILLLLKA--RYPANITLLRG 109 (294)
Q Consensus 42 ~~~i~viGDiH-G~~~~l~--~ll~~~-~~~~~~~~vfLGD~vDrG~~s~------evl~~l~~l~~--~~p~~v~~lrG 109 (294)
.-+++++||-= |.+.... +.+... ...+.+-+|-+||-++.|..+. +..+-+..-.. . .-..++++|
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L-~~Pwy~vLG 104 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDM-QIPFFTVLG 104 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhh-CCCeEEeCC
Confidence 44799999953 3332221 222222 2345677888999888777653 23444432211 1 114899999
Q ss_pred CCchh
Q 022658 110 NHESR 114 (294)
Q Consensus 110 NHE~~ 114 (294)
|||..
T Consensus 105 NHDy~ 109 (394)
T PTZ00422 105 QADWD 109 (394)
T ss_pred ccccc
Confidence 99973
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=90.01 E-value=0.33 Score=48.20 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=44.4
Q ss_pred CCCccEeecCCCCHH------------HHHH---HHHhCCCCCCceEEE-eCCeecCCC------CcHHHHHHHHHhhhh
Q 022658 42 NSPVTVCGDIHGQFH------------DLMK---LFQTGGHVPETNYIF-MGDFVDRGY------NSLEVFTILLLLKAR 99 (294)
Q Consensus 42 ~~~i~viGDiHG~~~------------~l~~---ll~~~~~~~~~~~vf-LGD~vDrG~------~s~evl~~l~~l~~~ 99 (294)
+-+|+-..|+||++. .+.+ ++++........+++ .||+++..+ .....++++-.|+..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 446899999999998 3333 333332222233444 899999844 334567777777654
Q ss_pred CCCcEEEeCCCCchh
Q 022658 100 YPANITLLRGNHESR 114 (294)
Q Consensus 100 ~p~~v~~lrGNHE~~ 114 (294)
.+-.||||.-
T Consensus 106 -----a~tiGNHEFd 115 (517)
T COG0737 106 -----AMTLGNHEFD 115 (517)
T ss_pred -----EEeecccccc
Confidence 6788999974
No 112
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=89.22 E-value=0.41 Score=43.77 Aligned_cols=66 Identities=21% Similarity=0.158 Sum_probs=38.7
Q ss_pred CccEeecCCCCHH-------------HHHHHHHhC----CC-CCCceEEEeCCeecCCCCc-------HHHHHHHHHhhh
Q 022658 44 PVTVCGDIHGQFH-------------DLMKLFQTG----GH-VPETNYIFMGDFVDRGYNS-------LEVFTILLLLKA 98 (294)
Q Consensus 44 ~i~viGDiHG~~~-------------~l~~ll~~~----~~-~~~~~~vfLGD~vDrG~~s-------~evl~~l~~l~~ 98 (294)
+|+-+.|+||.+. .+.++.+.+ .. .++.-++-.||.++..+.+ ..+++++-+|..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 5788999999753 122332222 11 2233445589999765432 234555555543
Q ss_pred hCCCcEEEeCCCCchh
Q 022658 99 RYPANITLLRGNHESR 114 (294)
Q Consensus 99 ~~p~~v~~lrGNHE~~ 114 (294)
. .+..||||..
T Consensus 87 D-----a~tlGNHEFd 97 (282)
T cd07407 87 D-----LLTIGNHELY 97 (282)
T ss_pred c-----EEeecccccC
Confidence 3 6789999984
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=89.13 E-value=0.39 Score=43.89 Aligned_cols=66 Identities=20% Similarity=0.120 Sum_probs=37.1
Q ss_pred CccEeecCCCCHHH----------HHHHHHhCCC-----CCCceEEEeCCeecCCCC-----cHHHHHHHHHhhhhCCCc
Q 022658 44 PVTVCGDIHGQFHD----------LMKLFQTGGH-----VPETNYIFMGDFVDRGYN-----SLEVFTILLLLKARYPAN 103 (294)
Q Consensus 44 ~i~viGDiHG~~~~----------l~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-----s~evl~~l~~l~~~~p~~ 103 (294)
.|+.+.|+||++.. +..++++... .+..-++-.||.+...+. ...+++++-++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 36788999998532 3444544321 233344448999843332 23345555555543
Q ss_pred EEEeCCCCchh
Q 022658 104 ITLLRGNHESR 114 (294)
Q Consensus 104 v~~lrGNHE~~ 114 (294)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 455999963
No 114
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=88.77 E-value=0.61 Score=43.32 Aligned_cols=64 Identities=20% Similarity=0.112 Sum_probs=40.5
Q ss_pred ccEeecCCCCHH------HHHHHHHhCCC-----CCCceEEEeCCeecCCCC-------------cHHHHHHHHHhhhhC
Q 022658 45 VTVCGDIHGQFH------DLMKLFQTGGH-----VPETNYIFMGDFVDRGYN-------------SLEVFTILLLLKARY 100 (294)
Q Consensus 45 i~viGDiHG~~~------~l~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~l~~~~ 100 (294)
|+-+.|+||++. .+..+++.... .++..++..||.+.-++. ...+++++-++...
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D- 81 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ- 81 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc-
Confidence 567889999953 44444444321 234455668999875442 34556666666654
Q ss_pred CCcEEEeCCCCch
Q 022658 101 PANITLLRGNHES 113 (294)
Q Consensus 101 p~~v~~lrGNHE~ 113 (294)
.+..||||.
T Consensus 82 ----a~tlGNHEF 90 (313)
T cd08162 82 ----AIALGNHEF 90 (313)
T ss_pred ----EEecccccc
Confidence 578999995
No 115
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=88.40 E-value=0.72 Score=39.78 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=40.3
Q ss_pred ccEeecCCCC-----HHHHHHHHHhCC-CCCCceEEEeCCeecCCCCcH----------HHHHHHHHhhhhCC-----Cc
Q 022658 45 VTVCGDIHGQ-----FHDLMKLFQTGG-HVPETNYIFMGDFVDRGYNSL----------EVFTILLLLKARYP-----AN 103 (294)
Q Consensus 45 i~viGDiHG~-----~~~l~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~l~~~~p-----~~ 103 (294)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+....+ -+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777765 667777887776 566689999999999632211 11111222211111 38
Q ss_pred EEEeCCCCchhhh
Q 022658 104 ITLLRGNHESRQL 116 (294)
Q Consensus 104 v~~lrGNHE~~~~ 116 (294)
+++++|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 116
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=88.37 E-value=0.92 Score=40.92 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=44.7
Q ss_pred CccEeecCCCCH--HHHHHHHHhCCCC-CCceEEEeCCeecCC-CCcHHHHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 44 PVTVCGDIHGQF--HDLMKLFQTGGHV-PETNYIFMGDFVDRG-YNSLEVFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 44 ~i~viGDiHG~~--~~l~~ll~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
|+.+||||=|.. ..+.+.|..+... +.+-+|..||..--| .-+.++.+.|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 578999999984 3445555554322 345566689998766 3577888888777654 4544 999864
No 117
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=87.32 E-value=0.73 Score=41.76 Aligned_cols=65 Identities=25% Similarity=0.293 Sum_probs=44.2
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCC-cEEEeCCCCchhh
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPA-NITLLRGNHESRQ 115 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~ 115 (294)
.+++.|+|.|+...+.. ..++.|.++-+||+-.-|. +.||+.+=..+-. .|. .-+.|+||||...
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeeccceee
Confidence 57999999998766553 2456677788999987665 5666654333322 222 4577999999753
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=87.32 E-value=0.63 Score=47.38 Aligned_cols=65 Identities=20% Similarity=0.218 Sum_probs=40.4
Q ss_pred CccEeecCCCCHH----------------HHHHHHHhCCCC-CCceEEEeCCeecCCCCc-------------HHHHHHH
Q 022658 44 PVTVCGDIHGQFH----------------DLMKLFQTGGHV-PETNYIFMGDFVDRGYNS-------------LEVFTIL 93 (294)
Q Consensus 44 ~i~viGDiHG~~~----------------~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~l 93 (294)
+|+-..|+||++. .+..++++.... ++..++-.||.+...+.+ ..+++++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 5788999999964 333445443222 344555589999755432 2355555
Q ss_pred HHhhhhCCCcEEEeCCCCch
Q 022658 94 LLLKARYPANITLLRGNHES 113 (294)
Q Consensus 94 ~~l~~~~p~~v~~lrGNHE~ 113 (294)
-.|... ....||||.
T Consensus 84 N~lgyD-----a~tlGNHEF 98 (626)
T TIGR01390 84 NLLKYD-----VGNLGNHEF 98 (626)
T ss_pred hhcCcc-----EEecccccc
Confidence 555533 578999995
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=87.28 E-value=0.68 Score=47.38 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=43.4
Q ss_pred cCCCccEeecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeCCeecCCCCcH-------------HHH
Q 022658 41 VNSPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNSL-------------EVF 90 (294)
Q Consensus 41 ~~~~i~viGDiHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~vDrG~~s~-------------evl 90 (294)
..-+|+-..|+||++.. +..++++... .++..+|-.||.+...|.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678999999998642 3344444422 23455566899997655421 356
Q ss_pred HHHHHhhhhCCCcEEEeCCCCch
Q 022658 91 TILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 91 ~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
+.+-.|... ....||||.
T Consensus 104 ~amN~lgyD-----a~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDYD-----VGNLGNHEF 121 (649)
T ss_pred HHHHhcCCc-----EEeccchhh
Confidence 666666543 678999995
No 120
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=87.26 E-value=0.04 Score=52.03 Aligned_cols=202 Identities=11% Similarity=-0.056 Sum_probs=116.3
Q ss_pred CceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChHHHHHHhc---Ccchhhhhhhhhccc
Q 022658 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYG---NANAWRYCTDVFDYL 146 (294)
Q Consensus 70 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~~~~~L 146 (294)
.-..|+++++.+++.+.++.+.+-...+..+-.+-...++||+... ++..+....-. .-.+++..++-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~-----~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSS-----FKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcc-----hhhhheeecccccCceEEEEeccCcCccc
Confidence 4567889999999999999988888888777777788999995432 22222221111 123566778888888
Q ss_pred ceeEEEeceEEEecCCCCCCCCCHHHHHhhhccCCCCCCCCccccccCCCCC-----CCCCccCCCCCccccCHH--HHH
Q 022658 147 TLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPED-----IETWAVSPRGAGWLFGSR--VTS 219 (294)
Q Consensus 147 P~~~~i~~~~l~vHgGi~~~~~~~~~i~~i~r~~~~~~~~~~~~llWsdp~~-----~~~~~~~~rg~~~~fg~~--~~~ 219 (294)
+...+.+ ++++.|++..|.......+..+.-..--..++. .+. |-.+-+ ...|...+ ....||.+ ..-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn-~kg-~f~llD~~~~~k~tw~~~~--~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGN-AKG-GFLLLDSDFNEKGTWEKPG--HSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccC-CcC-CeEEecCccceecccccCC--Cccccccceeecc
Confidence 8887755 899999999998754433332211100000000 011 222221 12333222 22222322 222
Q ss_pred HHHHhCCCcEEEeccceeecCeeEEe-cCCeEEEEEcCCCCCccCCCcEEEEEEcCCCc--eeEEEEec
Q 022658 220 EFNHINNLDLVCRAHQLVQEGLKYMF-QDKGLVTVWSAPNYCYRCGNVASILSFNENMV--RYPACWHA 285 (294)
Q Consensus 220 ~fl~~~~~~~ivrgH~~~~~G~~~~~-~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~--~~~~~~~~ 285 (294)
++....+.....+.|.-. ||...+ +++ .+.++.+-|.-...|..+.+.+..++. .+++.++.
T Consensus 198 r~~~mIstewgap~~~~~--gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~gllpleiRfLh~ 262 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRK--GFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTGLLPLEIRFLHN 262 (476)
T ss_pred ccceEEeecccCchhhhc--CCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCCcceEEeeeccC
Confidence 333344555566666654 544433 244 677888888777788889998887633 34444443
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.25 E-value=0.77 Score=50.17 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=40.0
Q ss_pred CCccEeecCCCCHH----------------HHHHHHHhCCCCCCceEEE-eCCeecCCCC--------------cHHHHH
Q 022658 43 SPVTVCGDIHGQFH----------------DLMKLFQTGGHVPETNYIF-MGDFVDRGYN--------------SLEVFT 91 (294)
Q Consensus 43 ~~i~viGDiHG~~~----------------~l~~ll~~~~~~~~~~~vf-LGD~vDrG~~--------------s~evl~ 91 (294)
-+|+..+|+||++. .+..+++.........+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 45899999999853 3344455443222234444 8999986651 123455
Q ss_pred HHHHhhhhCCCcEEEeCCCCch
Q 022658 92 ILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 92 ~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
.+-.|... ....||||.
T Consensus 122 ~mN~lgyD-----a~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGYD-----AGTLGNHEF 138 (1163)
T ss_pred HHhhcCcc-----EEeeccccc
Confidence 55555432 567999996
No 122
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=85.35 E-value=0.55 Score=45.40 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=34.4
Q ss_pred CceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhh
Q 022658 70 ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQL 116 (294)
Q Consensus 70 ~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 116 (294)
.+++-.+||+-||||++-.+++-|..+- .+=+-.||||...+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 4678899999999999999999887653 36678899997544
No 123
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=85.01 E-value=1.2 Score=41.56 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=41.4
Q ss_pred CccEeecCCCCHH-----------------HHH--HHH-HhCCCCCCceEEEeCCeecCCCCc---HHHHHHHHHhhhhC
Q 022658 44 PVTVCGDIHGQFH-----------------DLM--KLF-QTGGHVPETNYIFMGDFVDRGYNS---LEVFTILLLLKARY 100 (294)
Q Consensus 44 ~i~viGDiHG~~~-----------------~l~--~ll-~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~l~~~~ 100 (294)
+|+.+.|+|=... ++. ..+ +.+.....+.+||+||.|+. ... ..++....+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 6899999995444 111 111 12234456899999999985 322 23333333333333
Q ss_pred CCcEEEeCCCCchhh
Q 022658 101 PANITLLRGNHESRQ 115 (294)
Q Consensus 101 p~~v~~lrGNHE~~~ 115 (294)
.=-..++.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 223567999999864
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=83.04 E-value=1.5 Score=45.87 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=41.0
Q ss_pred CCccEeecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeCCeecCCCCc--------------HHHHH
Q 022658 43 SPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNS--------------LEVFT 91 (294)
Q Consensus 43 ~~i~viGDiHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~vDrG~~s--------------~evl~ 91 (294)
-+|+-..|+||++.. +..++++... .++..++-.||++...|.+ ..+++
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 468889999999542 2233443321 2344566689999754432 13566
Q ss_pred HHHHhhhhCCCcEEEeCCCCch
Q 022658 92 ILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 92 ~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
.+-.|... ....||||.
T Consensus 196 amN~LGyD-----A~tLGNHEF 212 (814)
T PRK11907 196 ALEALGFD-----AGTLGNHEF 212 (814)
T ss_pred HHhccCCC-----EEEechhhc
Confidence 66666543 678999995
No 125
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.29 E-value=3.6 Score=39.93 Aligned_cols=69 Identities=28% Similarity=0.428 Sum_probs=52.4
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCC--CCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCC
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHV--PETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNH 111 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 111 (294)
+.+|.|+||.-|+++.|.+-.+++... |-+-++++|++.+-..++.|++.+.-.-+ ..|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 478999999999999998877766432 45888999999987666778777665543 4566677777765
No 126
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=80.23 E-value=14 Score=31.72 Aligned_cols=85 Identities=13% Similarity=0.213 Sum_probs=60.8
Q ss_pred ceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCchhhhhhhcCChH----------------HHHHHhcCcc
Q 022658 71 TNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYD----------------ECQRKYGNAN 134 (294)
Q Consensus 71 ~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~gf~~----------------e~~~~~~~~~ 134 (294)
..+||+| .|.+.-|+++++.+++..|-++.+ +.|+-|.|..++...|.. |..++|- ..
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~l-tS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWL-TS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhh-hh
Confidence 5688888 477899999999999999887655 499999998876554421 1112222 24
Q ss_pred hhhhhhhhhcccceeEEEeceEEEecC
Q 022658 135 AWRYCTDVFDYLTLSAIIDGTVLCVHG 161 (294)
Q Consensus 135 ~~~~~~~~~~~LP~~~~i~~~~l~vHg 161 (294)
+|..+..++.++++...+.-.++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 556677777788888777666777776
No 127
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=80.13 E-value=7.8 Score=37.79 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCc----EEEeccceeec--CeeEEecCCeEEEEE
Q 022658 215 SRVTSEFNHINNLD----LVCRAHQLVQE--GLKYMFQDKGLVTVW 254 (294)
Q Consensus 215 ~~~~~~fl~~~~~~----~ivrgH~~~~~--G~~~~~~~~~~itvf 254 (294)
++...+.|+.+|++ .||-||+|+.+ |-...-+||+++-|-
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVID 560 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVID 560 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEc
Confidence 45677888999887 89999999864 555544599999884
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=80.00 E-value=2.9 Score=41.96 Aligned_cols=64 Identities=14% Similarity=0.048 Sum_probs=38.2
Q ss_pred ccEeecCCCCHHH---------------------HHHHHHhCCC-CCCceEEEeCCeecCCCCc-----HHHHHHHHHhh
Q 022658 45 VTVCGDIHGQFHD---------------------LMKLFQTGGH-VPETNYIFMGDFVDRGYNS-----LEVFTILLLLK 97 (294)
Q Consensus 45 i~viGDiHG~~~~---------------------l~~ll~~~~~-~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~ 97 (294)
|+-+.|+||++.. +..++++... .++..++..||.+...+.+ ...++++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5567788877533 3334444322 2445566689998755432 33455555555
Q ss_pred hhCCCcEEEeCCCCch
Q 022658 98 ARYPANITLLRGNHES 113 (294)
Q Consensus 98 ~~~p~~v~~lrGNHE~ 113 (294)
.. .+..||||.
T Consensus 83 ~D-----a~~lGNHEF 93 (550)
T TIGR01530 83 FD-----FFTLGNHEF 93 (550)
T ss_pred CC-----EEEeccccc
Confidence 43 678999996
No 129
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=77.18 E-value=2.8 Score=42.03 Aligned_cols=67 Identities=21% Similarity=0.141 Sum_probs=38.1
Q ss_pred CCccEeecCCCCHH----------HHHHHHHhCC-----CCCCceEEEeCCeecCCCCc-----HHHHHHHHHhhhhCCC
Q 022658 43 SPVTVCGDIHGQFH----------DLMKLFQTGG-----HVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPA 102 (294)
Q Consensus 43 ~~i~viGDiHG~~~----------~l~~ll~~~~-----~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~ 102 (294)
-.|+-+.|+||++. .+..+++... ..++.-++..||.+...+.+ ..+++++-.+...
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D--- 111 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD--- 111 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC---
Confidence 45889999999864 2223343332 12344555589998643322 2345555555433
Q ss_pred cEEEeCCCCchh
Q 022658 103 NITLLRGNHESR 114 (294)
Q Consensus 103 ~v~~lrGNHE~~ 114 (294)
.+..||||.-
T Consensus 112 --a~tlGNHEFD 121 (551)
T PRK09558 112 --AMAVGNHEFD 121 (551)
T ss_pred --EEcccccccC
Confidence 3455999963
No 130
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=76.89 E-value=11 Score=34.73 Aligned_cols=72 Identities=21% Similarity=0.376 Sum_probs=48.6
Q ss_pred CCccEeecCCCC----HHHHHHHHHhC-CCCC----CceEEEeCCeecCC----CCc----HHHHHHHHHh-hhhCC---
Q 022658 43 SPVTVCGDIHGQ----FHDLMKLFQTG-GHVP----ETNYIFMGDFVDRG----YNS----LEVFTILLLL-KARYP--- 101 (294)
Q Consensus 43 ~~i~viGDiHG~----~~~l~~ll~~~-~~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~l-~~~~p--- 101 (294)
.+++|+||+|=+ ++.|.++|+.. ...+ ...+|++|+++.+. ..+ .+-.+-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 468999999966 77777788766 2222 46789999998763 222 2334444442 33455
Q ss_pred --CcEEEeCCCCchh
Q 022658 102 --ANITLLRGNHESR 114 (294)
Q Consensus 102 --~~v~~lrGNHE~~ 114 (294)
.++++|+|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 4899999999974
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.22 E-value=3.1 Score=43.47 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=40.7
Q ss_pred CCCccEeecCCCCHHH----------------HHHHHHhCCC-CCCceEEEeCCeecCCCC-------------------
Q 022658 42 NSPVTVCGDIHGQFHD----------------LMKLFQTGGH-VPETNYIFMGDFVDRGYN------------------- 85 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~----------------l~~ll~~~~~-~~~~~~vfLGD~vDrG~~------------------- 85 (294)
.-+|+-..|+||++.. +..++++... .++..+|-.||++--.+.
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4469999999999532 2334443321 234556668998853332
Q ss_pred cHHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 86 SLEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 86 s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
...+++++-.|... ....||||.
T Consensus 119 ~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCCC-----EEecccccc
Confidence 12356666556543 678999994
No 132
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=74.62 E-value=1.9 Score=39.16 Aligned_cols=68 Identities=26% Similarity=0.296 Sum_probs=43.0
Q ss_pred CCccEeecC--CCCHHHHHHHHHhCCC---CCCceEEEeCCee-cCCCCc---------HHHHHHHHHhhhhCCCcEEEe
Q 022658 43 SPVTVCGDI--HGQFHDLMKLFQTGGH---VPETNYIFMGDFV-DRGYNS---------LEVFTILLLLKARYPANITLL 107 (294)
Q Consensus 43 ~~i~viGDi--HG~~~~l~~ll~~~~~---~~~~~~vfLGD~v-DrG~~s---------~evl~~l~~l~~~~p~~v~~l 107 (294)
-++.||||- +|.+..-+..++.... .+.+-++-+||-+ |-|..+ .+-+.---+|++ .-+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhhh
Confidence 369999994 7888877776665322 2346777799954 666644 222222223332 25889
Q ss_pred CCCCchh
Q 022658 108 RGNHESR 114 (294)
Q Consensus 108 rGNHE~~ 114 (294)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999986
No 133
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=54.61 E-value=22 Score=31.31 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=28.4
Q ss_pred HHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCC
Q 022658 218 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 259 (294)
Q Consensus 218 ~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y 259 (294)
+.+.+-..|++.||-||+++..+++. . ++++| +||-=|+
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~-~-~~~~I-~YslGNf 235 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEI-Y-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEE-E-CCEEE-EEccccc
Confidence 33444447999999999999999987 5 57665 5665444
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=49.08 E-value=13 Score=37.62 Aligned_cols=41 Identities=15% Similarity=0.170 Sum_probs=35.2
Q ss_pred CHHHHHHHHHhCCCc----EEEeccceee--cCeeEEecCCeEEEEE
Q 022658 214 GSRVTSEFNHINNLD----LVCRAHQLVQ--EGLKYMFQDKGLVTVW 254 (294)
Q Consensus 214 g~~~~~~fl~~~~~~----~ivrgH~~~~--~G~~~~~~~~~~itvf 254 (294)
.++...+.|+.+|++ .||-||+||. +|-...-++|+++.|.
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VID 553 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVID 553 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEc
Confidence 556788889999999 9999999987 7887776699999994
No 135
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=48.36 E-value=36 Score=24.90 Aligned_cols=68 Identities=16% Similarity=0.099 Sum_probs=45.6
Q ss_pred CCccEeecCCCCHHHHHHHHHhCCC--CCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCC
Q 022658 43 SPVTVCGDIHGQFHDLMKLFQTGGH--VPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGN 110 (294)
Q Consensus 43 ~~i~viGDiHG~~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGN 110 (294)
..+.||=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+.++...+...+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 4567788866678888888877632 3566777899999988888776666666666666665544444
No 136
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=47.46 E-value=59 Score=32.57 Aligned_cols=52 Identities=13% Similarity=0.145 Sum_probs=40.8
Q ss_pred CCCccEeecCCC------------CHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHH
Q 022658 42 NSPVTVCGDIHG------------QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTIL 93 (294)
Q Consensus 42 ~~~i~viGDiHG------------~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l 93 (294)
..||.|-.|+|= .+..|..+|+.+.-...+.++.-||++.-..-|.++|.-.
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHH
Confidence 457999999993 3778888998887778899999999998777776654433
No 137
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=47.29 E-value=22 Score=31.69 Aligned_cols=89 Identities=25% Similarity=0.309 Sum_probs=46.5
Q ss_pred CceEEEeCCee-cCCCC---cHHHHHHHHHhhhh-------CCCcEEEeCCCCchhhhhhhcCChHHHHHHhcCcchh-h
Q 022658 70 ETNYIFMGDFV-DRGYN---SLEVFTILLLLKAR-------YPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAW-R 137 (294)
Q Consensus 70 ~~~~vfLGD~v-DrG~~---s~evl~~l~~l~~~-------~p~~v~~lrGNHE~~~~~~~~gf~~e~~~~~~~~~~~-~ 137 (294)
.+..+||||-. ||=.. ..=++.+|-++... -..+|++|.||||.-. ++.|. .++....+. .
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny~------arlanhkls~g 157 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNYM------ARLANHKLSAG 157 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchHH------HHHhhCCCCcc
Confidence 35678898865 33111 12246666665442 2358999999999853 22221 111111110 1
Q ss_pred hhhhhhcccceeEEE-eceEEEecCCCCC
Q 022658 138 YCTDVFDYLTLSAII-DGTVLCVHGGLSP 165 (294)
Q Consensus 138 ~~~~~~~~LP~~~~i-~~~~l~vHgGi~~ 165 (294)
.--..++.+|+.-.- ..+++-.|-||-.
T Consensus 158 DTYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 158 DTYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred chhhccccccccccCcchhhhhcccCcee
Confidence 112345666665321 3467888888853
No 138
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=44.59 E-value=34 Score=30.77 Aligned_cols=11 Identities=27% Similarity=0.619 Sum_probs=5.6
Q ss_pred CccEeecCCCC
Q 022658 44 PVTVCGDIHGQ 54 (294)
Q Consensus 44 ~i~viGDiHG~ 54 (294)
|+.++||+-|.
T Consensus 2 riLfiGDvvGk 12 (266)
T COG1692 2 RILFIGDVVGK 12 (266)
T ss_pred eEEEEecccCc
Confidence 44555555554
No 139
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=41.57 E-value=2.2e+02 Score=24.22 Aligned_cols=75 Identities=16% Similarity=0.239 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCCC-------------------------
Q 022658 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVP------------------------- 69 (294)
Q Consensus 15 ~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~~------------------------- 69 (294)
.++++++.+-+++..+.+.++..= ...++||=++|++--+-.++..+.++.
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 478999988888887777766433 568899999999877777776654431
Q ss_pred ------CceEEEeCCeecCCCCcHHHHHHH
Q 022658 70 ------ETNYIFMGDFVDRGYNSLEVFTIL 93 (294)
Q Consensus 70 ------~~~~vfLGD~vDrG~~s~evl~~l 93 (294)
...++.+=|++|-|..-..+.+++
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l 116 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLL 116 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHH
Confidence 246888999999887555555555
No 140
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=41.43 E-value=36 Score=29.82 Aligned_cols=29 Identities=17% Similarity=0.119 Sum_probs=25.8
Q ss_pred ccCHHHHHHHHHhCCCcEEEeccceeecC
Q 022658 212 LFGSRVTSEFNHINNLDLVCRAHQLVQEG 240 (294)
Q Consensus 212 ~fg~~~~~~fl~~~~~~~ivrgH~~~~~G 240 (294)
.+|...+.+++++.+++++|.||.+...+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 57888999999999999999999998754
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=41.06 E-value=76 Score=30.83 Aligned_cols=67 Identities=12% Similarity=0.064 Sum_probs=47.8
Q ss_pred CCCccEeecCCC-CHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhC-CCcEEEeCC
Q 022658 42 NSPVTVCGDIHG-QFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARY-PANITLLRG 109 (294)
Q Consensus 42 ~~~i~viGDiHG-~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~-p~~v~~lrG 109 (294)
...+.+|=|-+. +.+.+.++|+.+...+..+++.+||+...|+.+.+.-.-+.++.... .+.++ +-|
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 345788889655 58888888887654445688999999999999988876666554433 34454 446
No 142
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.78 E-value=99 Score=24.71 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCCeecCCCCc-----HHHHHHHHHhhhhCCCcEEEe---CCCCchh
Q 022658 55 FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNS-----LEVFTILLLLKARYPANITLL---RGNHESR 114 (294)
Q Consensus 55 ~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l---rGNHE~~ 114 (294)
++.|++.++..+....-.++|+|+-.|++.+| +.....+..--..+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888888766667788899999987655 333333333222567766554 4777764
No 143
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=39.37 E-value=24 Score=31.77 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=25.3
Q ss_pred eEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCC
Q 022658 72 NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRG 109 (294)
Q Consensus 72 ~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrG 109 (294)
+++|+||+|.+.-. ..+...|.+++.+++..+.+.-|
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEECC
Confidence 58999999955331 23566788888888766555443
No 144
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=38.62 E-value=37 Score=30.85 Aligned_cols=39 Identities=31% Similarity=0.565 Sum_probs=26.4
Q ss_pred eEEEeCCeecCCCCcHH-HHHHHHHhhhhCCCcEEEeCCCCchh
Q 022658 72 NYIFMGDFVDRGYNSLE-VFTILLLLKARYPANITLLRGNHESR 114 (294)
Q Consensus 72 ~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 114 (294)
+++|+||++ |....+ +-..|-+++.+++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~--G~~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVY--GKAGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecC--CHHHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 689999999 444444 446677888888765555 455554
No 145
>PF14164 YqzH: YqzH-like protein
Probab=36.38 E-value=86 Score=22.05 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=27.6
Q ss_pred HHHHHHHHhcC-------CCCCHHHHHHHHHHHHHHHhhCCC
Q 022658 3 LDQWIAKVKEG-------QHLLEDELQLLCEYVKEILIEESN 37 (294)
Q Consensus 3 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~i~~~ep~ 37 (294)
|.+||.+..++ -++++.+...|++.....-.++|.
T Consensus 6 I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 6 IEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 45555555443 379999999999999999999986
No 146
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=33.23 E-value=1.2e+02 Score=27.45 Aligned_cols=38 Identities=29% Similarity=0.543 Sum_probs=27.7
Q ss_pred eEEEeCCeecCCCCcHH-HHHHHHHhhhhCCCcEEEeCCCC
Q 022658 72 NYIFMGDFVDRGYNSLE-VFTILLLLKARYPANITLLRGNH 111 (294)
Q Consensus 72 ~~vfLGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNH 111 (294)
+++|+||+| |..... +-+.|-.||.+|...++++-|+.
T Consensus 2 riLfiGDvv--Gk~Gr~~v~~~Lp~lk~kyk~dfvI~N~EN 40 (266)
T COG1692 2 RILFIGDVV--GKPGRKAVKEHLPQLKSKYKIDFVIVNGEN 40 (266)
T ss_pred eEEEEeccc--CcchHHHHHHHhHHHHHhhcCcEEEEcCcc
Confidence 689999999 555555 45568888988876677776653
No 147
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.32 E-value=93 Score=29.22 Aligned_cols=62 Identities=21% Similarity=0.329 Sum_probs=41.2
Q ss_pred HHHhhCCCccccCCCccEeecCC-CCHHHHHHHHHhCCCCCCceEEE-eCCeec--CCCCcHHHHHHHHHhhhh
Q 022658 30 EILIEESNVQPVNSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIF-MGDFVD--RGYNSLEVFTILLLLKAR 99 (294)
Q Consensus 30 ~i~~~ep~~l~~~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vf-LGD~vD--rG~~s~evl~~l~~l~~~ 99 (294)
+-++..|-.++-.+.+.++||.| |||.++.. .+..++| .-|+=. -|+....++.+..+|...
T Consensus 44 ~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~a 109 (410)
T COG4320 44 QDMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADFDEGHLGQYIWDLVRLAVSLVLA 109 (410)
T ss_pred HHHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEecccchhhccchHHHHHHHHHHHHHH
Confidence 34566676777788899999999 77776643 2334444 666622 366777777777777543
No 148
>PLN02965 Probable pheophorbidase
Probab=31.91 E-value=1.9e+02 Score=24.99 Aligned_cols=21 Identities=10% Similarity=-0.013 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCC--cEEEeccce
Q 022658 216 RVTSEFNHINNL--DLVCRAHQL 236 (294)
Q Consensus 216 ~~~~~fl~~~~~--~~ivrgH~~ 236 (294)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 447788888764 799999987
No 149
>PF14178 YppF: YppF-like protein
Probab=30.52 E-value=1.8e+02 Score=20.17 Aligned_cols=55 Identities=15% Similarity=0.382 Sum_probs=40.1
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCCHHHHHHHHHhCCCC
Q 022658 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHV 68 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~~~~l~~ll~~~~~~ 68 (294)
|++.++.+.|.......+..+.+|++=|+...-..--.+ ..|.++.+-|+..|..
T Consensus 1 M~l~eLk~~F~~~k~y~p~~~NeLLDFar~~Yi~gei~i-------------~eYR~lvreLE~~GA~ 55 (60)
T PF14178_consen 1 MNLHELKQKFMQKKKYEPEDMNELLDFARKLYIQGEISI-------------NEYRNLVRELEANGAV 55 (60)
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCcccH-------------HHHHHHHHHHHHhCCC
Confidence 688999999988888888888889888887654322111 2577777888777654
No 150
>PF03128 CXCXC: CXCXC repeat; InterPro: IPR004153 This repeat contains the conserved pattern CXCXC where X can be any amino acid. The repeat is found in up to five copies in Vascular endothelial growth factor C []. In the salivary glands of the dipteran Chironomus tentans, a specific messenger ribonucleoprotein (mRNP) particle, the Balbiani ring (BR) granule, can be visualized during its assembly on the gene and during its nucleocytoplasmic transport. This repeat is found over 70 copies in the balbiani ring protein 3 (Q03376 from SWISSPROT). It is also found in some silk proteins [].
Probab=30.11 E-value=21 Score=17.21 Aligned_cols=13 Identities=31% Similarity=1.135 Sum_probs=9.9
Q ss_pred EEEecCceeeeec
Q 022658 281 ACWHAGVCVCVCV 293 (294)
Q Consensus 281 ~~~~~~~~~~~~~ 293 (294)
+.|....|.|+|.
T Consensus 2 q~wn~~tC~C~Cp 14 (14)
T PF03128_consen 2 QVWNDDTCQCECP 14 (14)
T ss_pred ceecCCCcCccCC
Confidence 4678888888884
No 151
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=29.66 E-value=1.9e+02 Score=27.61 Aligned_cols=69 Identities=14% Similarity=0.179 Sum_probs=46.0
Q ss_pred CCCccEeecCC-CCHHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCC-CcEEEeCCCC
Q 022658 42 NSPVTVCGDIH-GQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYP-ANITLLRGNH 111 (294)
Q Consensus 42 ~~~i~viGDiH-G~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p-~~v~~lrGNH 111 (294)
...+.+|=|-+ -+.+.+.++|+.+...+..+++.+|+.-.-|..+.+.-..+.+....+. +.++ +-|..
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi-~~g~~ 365 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVF-LVGEE 365 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEE-EECHH
Confidence 34578888855 4889999998877543356788899998778877766555555443333 4444 44543
No 152
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.40 E-value=2.4e+02 Score=23.33 Aligned_cols=53 Identities=21% Similarity=0.352 Sum_probs=38.6
Q ss_pred cEeecCCCCHHHHHHHHHh-CCC------------CCCceEEEeCCeecCCCCcHHHHHHHHHhhh
Q 022658 46 TVCGDIHGQFHDLMKLFQT-GGH------------VPETNYIFMGDFVDRGYNSLEVFTILLLLKA 98 (294)
Q Consensus 46 ~viGDiHG~~~~l~~ll~~-~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~ 98 (294)
++.+=.+||-..+.+.+.. ++. .....+||+|=-+|+|.-+-++.++|..|+-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~~ 67 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLKG 67 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHccC
Confidence 4555667887777655432 222 2346799999999999999999999988753
No 153
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=29.36 E-value=87 Score=27.66 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCC
Q 022658 217 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 259 (294)
Q Consensus 217 ~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y 259 (294)
.+.+.+-..|+++||-+|.++..|++. + .+++| +||-=|+
T Consensus 207 ~~a~~lidaGaDiIiG~HpHv~q~~E~-y-~~~~I-~YSLGNf 246 (250)
T PF09587_consen 207 ELARALIDAGADIIIGHHPHVIQPVEI-Y-KGKPI-FYSLGNF 246 (250)
T ss_pred HHHHHHHHcCCCEEEeCCCCcccceEE-E-CCEEE-EEeCccc
Confidence 344444458999999999999999998 4 56654 4665444
No 154
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=26.20 E-value=1.2e+02 Score=26.36 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCcEEEeccceeecCeeEEecCCeEEEEEcCCCC
Q 022658 217 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNY 259 (294)
Q Consensus 217 ~~~~fl~~~~~~~ivrgH~~~~~G~~~~~~~~~~itvfSa~~y 259 (294)
.+.+.+-..|+++||-||+++..+++. . ++++| +||-=|+
T Consensus 198 ~la~~l~~~G~D~IiG~H~Hv~q~~E~-~-~~~~I-~YSlGNf 237 (239)
T cd07381 198 ELARALIDAGADLVIGHHPHVLQGIEI-Y-KGKLI-FYSLGNF 237 (239)
T ss_pred HHHHHHHHCCCCEEEcCCCCcCCCeEE-E-CCEEE-EEcCCCc
Confidence 334444457999999999999999988 5 56544 4665443
No 155
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=25.83 E-value=1.2e+02 Score=28.22 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=29.9
Q ss_pred CCCccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCee
Q 022658 42 NSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFV 80 (294)
Q Consensus 42 ~~~i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~v 80 (294)
.+.+..++|+=|+-..+.++-+.. +.+.+||+||..
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 356889999999988888888765 678899999975
No 156
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=25.36 E-value=1.5e+02 Score=30.01 Aligned_cols=62 Identities=21% Similarity=0.204 Sum_probs=37.1
Q ss_pred HHHHHHHHhCCCC--CCceEEEeCCee--cCCCCcHH----HHHHHHH-hhhhCCC-cEEEeCCCCchhhhh
Q 022658 56 HDLMKLFQTGGHV--PETNYIFMGDFV--DRGYNSLE----VFTILLL-LKARYPA-NITLLRGNHESRQLT 117 (294)
Q Consensus 56 ~~l~~ll~~~~~~--~~~~~vfLGD~v--DrG~~s~e----vl~~l~~-l~~~~p~-~v~~lrGNHE~~~~~ 117 (294)
..+..+|+.++.. .-|-++-.||.+ |+++.+.+ ++..+.+ +...+|+ -|+...||||..-.+
T Consensus 195 ~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N 266 (577)
T KOG3770|consen 195 RLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVN 266 (577)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHh
Confidence 3444555554332 246677799998 45665543 2333333 2334565 789999999987655
No 157
>PHA02894 hypothetical protein; Provisional
Probab=25.22 E-value=97 Score=23.15 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=20.2
Q ss_pred CCcEEEEEEcCCCceeEEEE--ecCceeeeec
Q 022658 264 GNVASILSFNENMVRYPACW--HAGVCVCVCV 293 (294)
Q Consensus 264 ~n~~avl~i~~~~~~~~~~~--~~~~~~~~~~ 293 (294)
.|..-||.|.+...+....| ...+.+|||.
T Consensus 4 ennslvliip~~~~~~p~lf~i~~~k~~cvc~ 35 (97)
T PHA02894 4 ENNSLVLIIPERINIIPQLFTIGDKKPICVCN 35 (97)
T ss_pred ecCcEEEEecccccccceeEEecCCCeEEEEe
Confidence 35667777877666555555 4558899984
No 158
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.01 E-value=2.9e+02 Score=21.02 Aligned_cols=43 Identities=23% Similarity=0.610 Sum_probs=25.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEE
Q 022658 55 FHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITL 106 (294)
Q Consensus 55 ~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 106 (294)
...+.++++. -|+.++|++||= |..-.|++.-+ ..++|++|..
T Consensus 52 ~~~i~~i~~~---fP~~kfiLIGDs---gq~DpeiY~~i---a~~~P~~i~a 94 (100)
T PF09949_consen 52 RDNIERILRD---FPERKFILIGDS---GQHDPEIYAEI---ARRFPGRILA 94 (100)
T ss_pred HHHHHHHHHH---CCCCcEEEEeeC---CCcCHHHHHHH---HHHCCCCEEE
Confidence 3444555543 367788888874 44446666554 4567876654
No 159
>TIGR01201 HU_rel DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe.
Probab=23.51 E-value=1.2e+02 Score=24.68 Aligned_cols=31 Identities=13% Similarity=0.253 Sum_probs=17.1
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 022658 2 DLDQWIAKVKEGQHLLEDELQLLCEYVKEIL 32 (294)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~ 32 (294)
+.+++++.+.+...++..++..+++...+++
T Consensus 32 t~~el~~~Ia~~s~~s~~dv~~vl~~l~~~i 62 (145)
T TIGR01201 32 DFEEIAELIAEESSLSPGDVKGIIDRLAYVL 62 (145)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4555566665555556555555555554444
No 160
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=23.47 E-value=1.7e+02 Score=21.23 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=25.7
Q ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 022658 1 MDLDQWIAKVKEGQHLLEDELQLLCEYVKEILIE 34 (294)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 34 (294)
|+..++++.+.+...++..++..+++...+++..
T Consensus 1 mtk~eli~~ia~~~~~~~~~v~~vl~~l~~~i~~ 34 (90)
T smart00411 1 MTKSELIDAIAEKAGLSKKDAKAAVDAFLEIITE 34 (90)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 5677888888888888888887777776666544
No 161
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=22.70 E-value=1.6e+02 Score=22.62 Aligned_cols=64 Identities=22% Similarity=0.233 Sum_probs=41.9
Q ss_pred CccEeecCCCCHHHHHHHHHhCCCCC-----------------CceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEE
Q 022658 44 PVTVCGDIHGQFHDLMKLFQTGGHVP-----------------ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITL 106 (294)
Q Consensus 44 ~i~viGDiHG~~~~l~~ll~~~~~~~-----------------~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 106 (294)
||.||.|=-....+|..+|+-+|... ...+|.+|+.- +....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 45666666666677777777666532 12345555543 5666666777777777788
Q ss_pred eCCCCchh
Q 022658 107 LRGNHESR 114 (294)
Q Consensus 107 lrGNHE~~ 114 (294)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 89998887
No 162
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=22.58 E-value=1.7e+02 Score=26.57 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=24.1
Q ss_pred CCCCceEEEeCCeecCCCCcHHHHHHHHHhhhhCCC
Q 022658 67 HVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPA 102 (294)
Q Consensus 67 ~~~~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~ 102 (294)
.+....+|++||+ +-.+.+.+.-.++..|....|.
T Consensus 174 ~~~~~pvIl~GDf-N~~~~s~~~~~ml~~l~~~~p~ 208 (283)
T TIGR03395 174 IPKDETVLIGGDL-NVNKGSNEYHDMFKTLNVSEPR 208 (283)
T ss_pred CCCCceEEEEeeC-CCCCCCHHHHHHHHHhcccCCC
Confidence 3345568999999 3456777777777777766553
No 163
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=22.33 E-value=2.1e+02 Score=25.86 Aligned_cols=10 Identities=10% Similarity=0.454 Sum_probs=5.1
Q ss_pred HHHHHHHHHh
Q 022658 55 FHDLMKLFQT 64 (294)
Q Consensus 55 ~~~l~~ll~~ 64 (294)
|..|+..|+.
T Consensus 159 Y~~l~~~l~~ 168 (262)
T PF06180_consen 159 YSALQAMLKK 168 (262)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 4455555554
No 164
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=22.27 E-value=3.2e+02 Score=20.25 Aligned_cols=93 Identities=17% Similarity=0.092 Sum_probs=47.7
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCccccCCC-----ccEeecCCCCHHHHHHHHHhCCCCCCceEEEeCCeec
Q 022658 7 IAKVKEGQHLLEDELQLLCEYVKEILIEESNVQPVNSP-----VTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVD 81 (294)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~-----i~viGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 81 (294)
++.......++.+++.+++++.. ...++.+..+ --+-|=+|=-+..+...+..++..+...+|+. ..
T Consensus 3 ~~~~~~~~~i~~~~l~~~~~~~~-----~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~ 74 (109)
T cd01533 3 VEAVRHTPSVSADELAALQARGA-----PLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CA 74 (109)
T ss_pred ccccccCCcCCHHHHHHHHhcCC-----CcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CC
Confidence 34444455677777776653210 1234444321 22333344456667666666654445566664 45
Q ss_pred CCCCcHHHHHHHHHhhhhCCCcEEEeCC
Q 022658 82 RGYNSLEVFTILLLLKARYPANITLLRG 109 (294)
Q Consensus 82 rG~~s~evl~~l~~l~~~~p~~v~~lrG 109 (294)
.|..|......|..+- +++.++.|.|
T Consensus 75 ~G~rs~~a~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 75 GRTRSIIGAQSLINAG--LPNPVAALRN 100 (109)
T ss_pred CCchHHHHHHHHHHCC--CCcceeEecC
Confidence 6766766666554443 2222666655
No 165
>COG0148 Eno Enolase [Carbohydrate transport and metabolism]
Probab=22.01 E-value=4.9e+02 Score=25.20 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCccccCCCccEeecCCCC----------HHHHHHHHHhCCCCCCc-------------
Q 022658 15 HLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQ----------FHDLMKLFQTGGHVPET------------- 71 (294)
Q Consensus 15 ~~~~~~~~~l~~~~~~i~~~ep~~l~~~~~i~viGDiHG~----------~~~l~~ll~~~~~~~~~------------- 71 (294)
+.....+.+.+....+++.....++...+....+||=-|- ++-+.+..+.+|+.+..
T Consensus 168 p~ga~sf~ealr~~~ev~h~lk~~l~~~g~~t~vGDEGgfAP~l~~~eeald~i~~Aie~agy~~g~~i~~alD~Aasef 247 (423)
T COG0148 168 PVGAESFKEALRAGAEVFHHLKKLLKEKGLSTGVGDEGGFAPNLKSNEEALDILVEAIEEAGYEPGEDIALALDVAASEF 247 (423)
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCcccCCCCCccHHHHHHHHHHHHHhCCCCCcceeeeehhhhhhh
Confidence 4567788889999999999888888888877779986663 33344455667776532
Q ss_pred ----eEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCch
Q 022658 72 ----NYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHES 113 (294)
Q Consensus 72 ----~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 113 (294)
+|++=|. ...+.|.++++..|..+|| =+.+--|=||.
T Consensus 248 y~~~~Y~~~~~----~~~~~e~i~~~~~Lv~~Yp-ivsiEDpl~E~ 288 (423)
T COG0148 248 YKDGKYVLEGE----SLTSEELIEYYLELVKKYP-IVSIEDPLSED 288 (423)
T ss_pred ccCCeeeecCc----ccCHHHHHHHHHHHHHhCC-EEEEcCCCCch
Confidence 2333332 3457889999999999999 23344555554
No 166
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=21.46 E-value=3.5e+02 Score=29.08 Aligned_cols=71 Identities=10% Similarity=0.147 Sum_probs=45.9
Q ss_pred CCCccEeecCCC-CHHHHHHHHHhCCCCC-CceEEEeCCeecCCCCcHHHHHHHHHhhhhCCCcEEEeCCCCc
Q 022658 42 NSPVTVCGDIHG-QFHDLMKLFQTGGHVP-ETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHE 112 (294)
Q Consensus 42 ~~~i~viGDiHG-~~~~l~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 112 (294)
...+.+|=|-++ +.+.+.++|+.+...+ ..+++.+|++-+.|+.+.+.-..+-++........+++-|..-
T Consensus 833 ~~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~ 905 (958)
T PRK11929 833 SCGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAA 905 (958)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCH
Confidence 345788889664 7888888888775333 4678889999998888876544443332222223444456543
No 167
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=20.97 E-value=1.5e+02 Score=20.49 Aligned_cols=26 Identities=15% Similarity=0.437 Sum_probs=18.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 022658 3 LDQWIAKVKEGQHLLEDELQLLCEYV 28 (294)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 28 (294)
+.++++++.+++.++.++..++++..
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 67889999999999999988887653
No 168
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=20.23 E-value=1.6e+02 Score=25.37 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=26.0
Q ss_pred cEeecCCCC-HHHHHHHHHhCCCCCC--ceEEEeCCeecCCC
Q 022658 46 TVCGDIHGQ-FHDLMKLFQTGGHVPE--TNYIFMGDFVDRGY 84 (294)
Q Consensus 46 ~viGDiHG~-~~~l~~ll~~~~~~~~--~~~vfLGD~vDrG~ 84 (294)
.+||-+||+ -.+...+|+.+..+.. .++++.= ++++|+
T Consensus 10 LFvgGlHG~Egk~t~~iL~~l~~~~~~~G~l~i~p-lv~~~k 50 (193)
T PF09892_consen 10 LFVGGLHGDEGKDTSPILKRLKPNDFNNGNLIIIP-LVENSK 50 (193)
T ss_pred EEEeeccCcchhhHHHHHHHhCcccccCceEEEEe-CCCCCC
Confidence 578889998 5566778887765433 4555544 777776
Done!