Query 022660
Match_columns 294
No_of_seqs 147 out of 1402
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 09:03:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022660.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022660hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 5.9E-45 2E-49 330.6 23.4 208 80-292 1-208 (276)
2 1f89_A 32.5 kDa protein YLR351 100.0 1.5E-44 5E-49 330.2 20.7 211 79-292 7-224 (291)
3 3p8k_A Hydrolase, carbon-nitro 100.0 1.1E-43 3.8E-48 323.6 23.5 206 74-292 12-220 (281)
4 3hkx_A Amidase; alpha-beta-BET 100.0 1.6E-42 5.6E-47 316.2 18.0 202 76-292 14-219 (283)
5 3ivz_A Nitrilase; alpha-beta s 100.0 2.1E-41 7.1E-46 305.2 24.5 194 83-292 2-197 (262)
6 2e11_A Hydrolase; dimethylarse 100.0 3E-41 1E-45 304.5 18.2 196 80-292 1-203 (266)
7 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.5E-41 8.5E-46 325.9 18.3 210 78-292 10-224 (440)
8 2vhh_A CG3027-PA; hydrolase; 2 100.0 4.5E-40 1.5E-44 314.3 26.3 205 78-292 68-289 (405)
9 1uf5_A N-carbamyl-D-amino acid 100.0 2.5E-39 8.4E-44 296.8 23.4 209 81-292 2-235 (303)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 5.5E-38 1.9E-42 292.8 23.6 196 80-292 11-220 (334)
11 3ilv_A Glutamine-dependent NAD 100.0 3.3E-38 1.1E-42 316.6 22.5 201 79-292 2-222 (634)
12 2uxy_A Aliphatic amidase; nitr 100.0 3.2E-38 1.1E-42 295.2 20.9 197 79-292 9-220 (341)
13 4f4h_A Glutamine dependent NAD 100.0 2.2E-37 7.4E-42 306.8 25.3 199 81-292 5-225 (565)
14 3n05_A NH(3)-dependent NAD(+) 100.0 1.3E-37 4.6E-42 310.1 21.6 199 81-292 3-220 (590)
15 3sdb_A Glutamine-dependent NAD 100.0 5.6E-35 1.9E-39 294.9 20.6 204 78-291 8-233 (680)
16 3hkx_A Amidase; alpha-beta-BET 79.9 8.4 0.00029 33.7 9.1 71 106-193 173-244 (283)
17 3obe_A Sugar phosphate isomera 76.4 11 0.00037 33.1 8.8 74 82-166 89-168 (305)
18 3p8k_A Hydrolase, carbon-nitro 71.4 8.8 0.0003 33.5 6.8 69 108-193 176-245 (281)
19 2uxy_A Aliphatic amidase; nitr 70.7 14 0.00047 33.3 8.1 70 106-192 174-244 (341)
20 3ivz_A Nitrilase; alpha-beta s 70.3 12 0.00042 32.0 7.4 67 107-193 155-222 (262)
21 3n05_A NH(3)-dependent NAD(+) 66.4 26 0.0009 34.1 9.6 72 107-193 173-245 (590)
22 3cqj_A L-ribulose-5-phosphate 63.7 20 0.00068 30.8 7.5 63 97-167 104-166 (295)
23 4f4h_A Glutamine dependent NAD 62.7 14 0.00047 36.0 6.8 72 107-193 178-250 (565)
24 2dyu_A Formamidase; AMIF, CEK, 61.9 19 0.00066 32.2 7.2 71 106-193 174-245 (334)
25 1k77_A EC1530, hypothetical pr 61.5 30 0.001 28.9 8.1 61 96-166 80-142 (260)
26 2e11_A Hydrolase; dimethylarse 60.6 22 0.00076 30.3 7.2 64 113-193 164-229 (266)
27 3ngf_A AP endonuclease, family 60.1 41 0.0014 28.4 8.8 62 96-167 88-150 (269)
28 1uf5_A N-carbamyl-D-amino acid 59.4 43 0.0015 29.0 9.0 41 152-192 218-259 (303)
29 3tva_A Xylose isomerase domain 58.6 30 0.001 29.5 7.7 62 96-167 97-158 (290)
30 1f89_A 32.5 kDa protein YLR351 57.5 7.4 0.00025 33.9 3.5 69 108-192 179-249 (291)
31 3p94_A GDSL-like lipase; serin 56.8 40 0.0014 26.6 7.8 76 84-165 76-159 (204)
32 2w1v_A Nitrilase-2, nitrilase 54.5 9.3 0.00032 33.0 3.6 69 108-192 163-233 (276)
33 3qc0_A Sugar isomerase; TIM ba 54.1 25 0.00086 29.6 6.3 65 96-167 78-142 (275)
34 3dx5_A Uncharacterized protein 53.8 29 0.001 29.5 6.8 64 94-167 77-142 (286)
35 3kws_A Putative sugar isomeras 53.6 42 0.0014 28.5 7.8 64 97-167 100-165 (287)
36 1ems_A Nitfhit, NIT-fragIle hi 51.9 12 0.0004 34.9 4.0 70 108-193 179-250 (440)
37 2q02_A Putative cytoplasmic pr 51.6 50 0.0017 27.6 7.9 74 82-167 64-139 (272)
38 3u0h_A Xylose isomerase domain 51.5 20 0.00068 30.3 5.3 63 96-167 79-141 (281)
39 3l23_A Sugar phosphate isomera 51.1 41 0.0014 29.2 7.4 60 96-166 103-164 (303)
40 1iuq_A Glycerol-3-phosphate ac 50.4 31 0.001 31.7 6.4 66 95-165 204-271 (367)
41 1i60_A IOLI protein; beta barr 49.0 39 0.0013 28.3 6.7 61 97-167 80-142 (278)
42 1nmo_A Hypothetical protein YB 46.8 46 0.0016 28.6 6.8 57 233-290 37-96 (247)
43 3rjt_A Lipolytic protein G-D-S 46.1 46 0.0016 26.3 6.5 61 96-165 112-172 (216)
44 3cny_A Inositol catabolism pro 45.6 63 0.0021 27.4 7.6 68 96-166 85-159 (301)
45 4fva_A 5'-tyrosyl-DNA phosphod 44.5 14 0.00048 30.3 3.1 40 82-124 11-54 (256)
46 2yyb_A Hypothetical protein TT 42.0 59 0.002 27.7 6.8 57 233-290 38-96 (242)
47 3tn4_A Phosphotriesterase; lac 40.8 68 0.0023 29.2 7.3 54 95-168 77-130 (360)
48 2hk0_A D-psicose 3-epimerase; 40.7 79 0.0027 27.2 7.6 66 96-167 102-170 (309)
49 3ayv_A Putative uncharacterize 39.9 44 0.0015 27.8 5.6 65 96-167 71-136 (254)
50 1k7c_A Rhamnogalacturonan acet 39.9 87 0.003 25.8 7.4 59 95-165 109-167 (233)
51 4hf7_A Putative acylhydrolase; 39.7 1.1E+02 0.0038 24.5 7.9 65 95-165 99-164 (209)
52 2qw5_A Xylose isomerase-like T 39.1 1E+02 0.0036 26.8 8.2 68 96-166 104-182 (335)
53 1tz9_A Mannonate dehydratase; 38.4 1.8E+02 0.0063 25.8 9.9 39 82-120 68-114 (367)
54 2vhh_A CG3027-PA; hydrolase; 2 38.2 22 0.00074 32.9 3.5 42 110-167 246-287 (405)
55 2o3h_A DNA-(apurinic or apyrim 37.4 78 0.0027 26.5 6.9 18 109-126 50-67 (285)
56 2gx8_A NIF3-related protein; s 35.8 72 0.0024 29.6 6.6 57 233-290 66-126 (397)
57 2j6v_A UV endonuclease, UVDE; 35.6 1.4E+02 0.0046 26.3 8.3 65 97-167 57-122 (301)
58 1vli_A Spore coat polysacchari 35.6 1.6E+02 0.0053 27.2 8.8 70 98-167 41-120 (385)
59 3g12_A Putative lactoylglutath 33.9 86 0.0029 23.0 5.9 41 150-194 77-118 (128)
60 3ey7_A Biphenyl-2,3-DIOL 1,2-d 33.8 1.1E+02 0.0038 21.7 6.5 45 150-194 84-128 (133)
61 3vni_A Xylose isomerase domain 33.7 1.4E+02 0.0049 25.1 8.0 63 97-167 84-151 (294)
62 3bdk_A D-mannonate dehydratase 32.9 1.4E+02 0.0049 27.3 8.2 42 82-123 77-126 (386)
63 1xla_A D-xylose isomerase; iso 32.2 1.3E+02 0.0043 27.2 7.7 64 97-167 112-180 (394)
64 2fyw_A Conserved hypothetical 32.1 1.1E+02 0.0039 26.3 7.1 57 233-290 40-100 (267)
65 3huh_A Virulence protein STM31 29.6 1.2E+02 0.0042 22.5 6.2 46 150-195 97-142 (152)
66 3qxb_A Putative xylose isomera 28.8 49 0.0017 28.7 4.1 67 97-166 110-177 (316)
67 1o7j_A L-asparaginase; atomic 28.7 1.8E+02 0.0061 25.9 7.9 62 229-292 217-278 (327)
68 2nyd_A UPF0135 protein SA1388; 28.2 92 0.0031 28.5 5.9 56 233-290 42-101 (370)
69 1ivn_A Thioesterase I; hydrola 28.1 1.5E+02 0.0051 23.0 6.7 69 84-165 64-137 (190)
70 2wlt_A L-asparaginase; hydrola 27.9 1.9E+02 0.0064 25.9 7.9 62 229-292 218-279 (332)
71 3p6l_A Sugar phosphate isomera 27.7 97 0.0033 25.7 5.7 59 82-167 76-134 (262)
72 1wsa_A Asparaginase, asparagin 27.5 1.9E+02 0.0066 25.7 7.9 62 229-292 215-276 (330)
73 3ilv_A Glutamine-dependent NAD 27.2 58 0.002 32.0 4.7 70 108-193 176-247 (634)
74 2qul_A D-tagatose 3-epimerase; 27.2 71 0.0024 26.9 4.8 65 97-167 84-152 (290)
75 1nns_A L-asparaginase II; amid 26.6 2E+02 0.007 25.5 7.9 62 229-292 211-272 (326)
76 2him_A L-asparaginase 1; hydro 26.6 1.5E+02 0.0052 26.8 7.1 63 229-292 229-292 (358)
77 2zds_A Putative DNA-binding pr 26.2 1E+02 0.0036 26.6 5.9 68 97-167 107-179 (340)
78 4h41_A Putative alpha-L-fucosi 26.0 1.7E+02 0.0057 26.4 7.2 85 82-169 33-121 (340)
79 1wdu_A TRAS1 ORF2P; four-layer 25.7 54 0.0019 27.0 3.7 38 85-126 20-57 (245)
80 4gew_A 5'-tyrosyl-DNA phosphod 25.2 44 0.0015 30.1 3.2 43 78-123 115-159 (362)
81 3mil_A Isoamyl acetate-hydroly 25.0 1.4E+02 0.0046 24.0 6.0 74 83-165 73-167 (240)
82 4fxs_A Inosine-5'-monophosphat 24.8 2.8E+02 0.0095 26.1 8.9 61 230-292 220-280 (496)
83 3dmy_A Protein FDRA; predicted 24.0 1.1E+02 0.0037 29.1 5.8 47 100-167 46-92 (480)
84 3ff4_A Uncharacterized protein 23.4 59 0.002 24.7 3.1 43 100-166 68-110 (122)
85 4eo3_A Bacterioferritin comigr 23.2 81 0.0028 28.0 4.5 24 176-199 100-123 (322)
86 2yv1_A Succinyl-COA ligase [AD 23.1 1.4E+02 0.0048 26.1 6.0 47 100-167 80-127 (294)
87 3zw5_A Glyoxalase domain-conta 23.0 1.9E+02 0.0066 21.3 6.2 45 149-193 100-144 (147)
88 3hp4_A GDSL-esterase; psychrot 23.0 2.5E+02 0.0086 21.3 7.9 69 84-165 68-141 (185)
89 3gfo_A Cobalt import ATP-bindi 22.7 2.2E+02 0.0076 24.4 7.2 74 105-193 152-225 (275)
90 3qfm_A SAPH, putative uncharac 22.6 53 0.0018 28.3 3.1 37 79-120 8-44 (270)
91 2eja_A URO-D, UPD, uroporphyri 22.1 80 0.0027 28.0 4.2 52 105-165 183-235 (338)
92 3nxk_A Cytoplasmic L-asparagin 22.1 1.8E+02 0.0063 26.0 6.7 62 229-292 220-282 (334)
93 2o14_A Hypothetical protein YX 21.9 2.3E+02 0.0078 25.4 7.4 75 84-165 232-313 (375)
94 4f1h_A Tyrosyl-DNA phosphodies 21.5 41 0.0014 26.8 2.0 40 81-123 2-43 (250)
95 2q0q_A ARYL esterase; SGNH hyd 21.3 2.6E+02 0.0088 21.8 7.0 73 84-165 85-180 (216)
96 1g6h_A High-affinity branched- 20.9 2.8E+02 0.0095 23.3 7.4 72 105-192 162-233 (257)
97 3sk2_A EHPR; antibiotic resist 20.8 2.4E+02 0.0082 20.2 7.3 42 149-194 85-129 (132)
98 3kol_A Oxidoreductase, glyoxal 20.7 2.4E+02 0.0084 20.4 6.4 42 149-194 108-149 (156)
99 1j5p_A Aspartate dehydrogenase 20.7 97 0.0033 26.8 4.3 46 102-166 72-117 (253)
100 3lmz_A Putative sugar isomeras 20.3 3.6E+02 0.012 22.1 9.3 39 76-120 11-49 (257)
101 1muw_A Xylose isomerase; atomi 20.3 2.5E+02 0.0085 25.1 7.3 67 96-166 111-179 (386)
102 1oi7_A Succinyl-COA synthetase 20.1 2.2E+02 0.0074 24.7 6.6 46 101-167 75-121 (288)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=5.9e-45 Score=330.56 Aligned_cols=208 Identities=55% Similarity=0.940 Sum_probs=188.2
Q ss_pred CCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHh
Q 022660 80 VAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (294)
Q Consensus 80 ~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (294)
|++||||++|+++.+|.+.|++++.+++++|++.|+|||||||++++||...++..+++.+ .++..+.|+++|++
T Consensus 1 M~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~-----~~~~~~~l~~~a~~ 75 (276)
T 2w1v_A 1 MSTFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKI-----PGESTQKLSEVAKE 75 (276)
T ss_dssp CCEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCS-----SSHHHHHHHHHHHH
T ss_pred CCccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccC-----CCHHHHHHHHHHHH
Confidence 4679999999998899999999999999999999999999999999999876654444332 25799999999999
Q ss_pred cCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeEEEeCCceEEEeeecc
Q 022660 160 LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYD 239 (294)
Q Consensus 160 ~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v~~~~~grigi~ICyD 239 (294)
++++|++|+.++++++++||++++++++|+++++|+|+|||+.++|....|.|..+|.+|+++.+|+++++|+|++||||
T Consensus 76 ~~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD 155 (276)
T 2w1v_A 76 SSIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYD 155 (276)
T ss_dssp HTSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCCCEEECSSCEEEECCGGG
T ss_pred cCeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCceeEEeCCceEEEEEEec
Confidence 99999999777777889999999999999999999999997765676666788999999999999999999999999999
Q ss_pred CcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 240 IRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 240 ~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
++|||++|.++.+|||+|++|++|+...+..+|..+.++||+||++|||++|.
T Consensus 156 ~~fpe~~r~~~~~ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~ 208 (276)
T 2w1v_A 156 MRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASP 208 (276)
T ss_dssp GGCHHHHHHHHHTTEEEEEEECCCCTTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred cccHHHHHHHHHcCCCEEEECCcCCCcCCHHHHHHHHHHHHHHcCcEEEEecc
Confidence 99999999999999999999999887666789999999999999999999995
No 2
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.5e-44 Score=330.17 Aligned_cols=211 Identities=51% Similarity=0.838 Sum_probs=178.9
Q ss_pred CCCceEEEEEecc-ccccHHHHHHHHHHHHHHH--HHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCC--cHHHHHH
Q 022660 79 PVAKFKVGLCQLS-VTADKERNIAHARRAIEEA--AEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDA--SPSTAML 153 (294)
Q Consensus 79 ~~~~~rValvQ~~-v~~d~~~n~~~i~~~i~~A--~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~--~~~~~~l 153 (294)
+.++||||++|++ ..+|++.|++++.+++++| .+.|+|||||||++++||...++..+++.+. .. ++..+.|
T Consensus 7 m~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l 83 (291)
T 1f89_A 7 LSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVIN---PKEPSTSVQFL 83 (291)
T ss_dssp BSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCC---SSSCCHHHHHH
T ss_pred ccccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhc---cCCCChHHHHH
Confidence 4457999999999 5699999999999999999 8899999999999999986543333333220 12 5799999
Q ss_pred HHHHHhcCcEEEEeeeeeeeC--CeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeEEEeCCce
Q 022660 154 SEVARLLKITIVGGSIPERSG--DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGR 231 (294)
Q Consensus 154 ~~lA~~~~i~Iv~Gs~~~~~~--~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v~~~~~gr 231 (294)
+++|++++++|++|+++++++ +++||++++++++|+++++|+|+|||++++|.+..|.|..+|.+|+++.+|+++++|
T Consensus 84 ~~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~~~~ 163 (291)
T 1f89_A 84 SNLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGK 163 (291)
T ss_dssp HHHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEE
T ss_pred HHHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCCceEecCCee
Confidence 999999999999997677765 789999999999999999999999998778877777888999999999999999999
Q ss_pred EEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 232 IGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 232 igi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+|++||||++|||++|.++.+|||+|++|++|+...++.+|..+.++||+||++|||++|.
T Consensus 164 ig~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~ 224 (291)
T 1f89_A 164 FGVGICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSP 224 (291)
T ss_dssp EEECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECC
T ss_pred EEEEEecccCchHHHHHHHhhCCCEEEECCcCCCCCcHHHHHHHHHHHHHHcCCEEEEecC
Confidence 9999999999999999999999999999999887667889999999999999999999985
No 3
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-43 Score=323.64 Aligned_cols=206 Identities=27% Similarity=0.440 Sum_probs=184.3
Q ss_pred CCCCCCCCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHH
Q 022660 74 PLPTPPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAM 152 (294)
Q Consensus 74 ~~~~~~~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~ 152 (294)
+.+.+..++||||++|+++. +|.+.|++++++++++|++.|+|||||||++++||...++...++.+ +++..+.
T Consensus 12 ~~~~~~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~-----~~~~~~~ 86 (281)
T 3p8k_A 12 SGLVPRGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNN-----LGQSFSF 86 (281)
T ss_dssp --CCCTTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEET-----THHHHHH
T ss_pred ccccccCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhcc-----CcHHHHH
Confidence 34457788999999999986 89999999999999999999999999999999999876544444433 2579999
Q ss_pred HHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCC-eEEEe-CCc
Q 022660 153 LSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP-TIVDT-DVG 230 (294)
Q Consensus 153 l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~-~v~~~-~~g 230 (294)
|+++|++++++|++|+..+++++++||++++|+++|+++++|+|+||++ .|.|..+|++|++. .+|++ +++
T Consensus 87 l~~la~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~-------~f~E~~~f~~G~~~~~v~~~~~~~ 159 (281)
T 3p8k_A 87 IKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVP-------MLREHEFLTAGEYVAEPFQLSDGT 159 (281)
T ss_dssp HHHHHHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCT-------TTTGGGTCCCCSSCCCCEECTTCC
T ss_pred HHHHHhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCC-------CcCccccCcCCCCCceeEEeCCCc
Confidence 9999999999999997667788999999999999999999999999986 35788999999998 99999 999
Q ss_pred eEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 231 RIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 231 rigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|+|++||||++|||++|.++.+|||+|++|++|+.. ...+|..+.++||+||++|||++|.
T Consensus 160 ~ig~~IC~D~~fpe~~r~~~~~Gadli~~psa~~~~-~~~~~~~~~~arA~en~~~vv~~n~ 220 (281)
T 3p8k_A 160 YVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMS-RLQHWHSLLKARAIENNMFVIGTNS 220 (281)
T ss_dssp EEEEEEGGGGGCTHHHHHHHHTTCCEEEEEECCBGG-GHHHHHHHHHHHHHHHTSEEEEEEC
T ss_pred EEEEEEecCCCCcHHHHHHHHCCCCEEEECCCCCCc-cHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 999999999999999999999999999999998754 3678999999999999999999996
No 4
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.6e-42 Score=316.22 Aligned_cols=202 Identities=23% Similarity=0.338 Sum_probs=178.0
Q ss_pred CCCCCCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc-chhhhhccCCCCcHHHHHH
Q 022660 76 PTPPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAML 153 (294)
Q Consensus 76 ~~~~~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~-~~~~~~~~~~~~~~~~~~l 153 (294)
+....++||||++|+++. +|.+.|++++.+++++|++.|+|||||||++++||...++. .+++..+ ++.++.|
T Consensus 14 ~~~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~-----~~~~~~l 88 (283)
T 3hkx_A 14 LVIRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQV-----DAARSRL 88 (283)
T ss_dssp SCCTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHH-----HHHHHHH
T ss_pred ceecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccC-----CHHHHHH
Confidence 445667899999999987 69999999999999999999999999999999999865432 3333322 4689999
Q ss_pred HHHHHhcCcEEEEeeeeeeeC-CeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCC-CeEEEeCCce
Q 022660 154 SEVARLLKITIVGGSIPERSG-DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTDVGR 231 (294)
Q Consensus 154 ~~lA~~~~i~Iv~Gs~~~~~~-~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~-~~v~~~~~gr 231 (294)
+++|++++++|++| .+++++ +++||++++|+++|+++++|+|+||+++ .|..+|++|++ ..+|+++++|
T Consensus 89 ~~~a~~~~i~iv~G-~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~--------~E~~~f~~G~~~~~v~~~~~~~ 159 (283)
T 3hkx_A 89 RGIARDRGIALVWS-LPGPEGPEQRGITAELADEHGEVLASYQKVQLYGP--------EEKAAFVPGEQPPPVLSWGGRQ 159 (283)
T ss_dssp HHHHHHTTSEEEEC-CBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCHH--------HHHHHSCCCCSCCCEEEETTEE
T ss_pred HHHHHHhCCEEEEE-EEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCCc--------CchhhccCCCCCceEEEECCEE
Confidence 99999999999999 567665 7899999999999999999999999652 47788999998 6899999999
Q ss_pred EEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 232 IGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 232 igi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
||++||||++|||++|.++.+|||+|++|++|+...+ .+|..+.++||+||++|||++|.
T Consensus 160 ig~~IC~D~~fpe~~r~l~~~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~ 219 (283)
T 3hkx_A 160 LSLLVCYDVEFPEMVRAAAARGAQLVLVPTALAGDET-SVPGILLPARAVENGITLAYANH 219 (283)
T ss_dssp EEECCGGGGGSHHHHHHHHHTTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHTCEEEEECB
T ss_pred EEEEEecCcCCHHHHHHHHHCCCCEEEECCCCCCccc-HHHHHHHHHHHHHhCCEEEEEcc
Confidence 9999999999999999999999999999999876544 78999999999999999999985
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=2.1e-41 Score=305.19 Aligned_cols=194 Identities=31% Similarity=0.477 Sum_probs=173.6
Q ss_pred eEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcC
Q 022660 83 FKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLK 161 (294)
Q Consensus 83 ~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~ 161 (294)
||||++|+++. +|.+.|++++.+++++|++.|+|||||||++++||...+.....+... ...+++.++.|+++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~-~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQ-KIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCB-CTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcC-ccCCCHHHHHHHHHHHHcC
Confidence 79999999987 999999999999999999999999999999999998765332211111 1124589999999999999
Q ss_pred cEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCC-CCeEEEeCCceEEEeeeccC
Q 022660 162 ITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGE-TPTIVDTDVGRIGIGICYDI 240 (294)
Q Consensus 162 i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~-~~~v~~~~~grigi~ICyD~ 240 (294)
++|++| +++++++++||++++++++| ++..|+|+||+ +.|..+|++|+ ++.+|+++++|+|++||||+
T Consensus 81 ~~iv~G-~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~---------~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~ 149 (262)
T 3ivz_A 81 VYIVAG-TAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF---------YREKFFFEPGDLGFRVFDLGFMKVGVMICFDW 149 (262)
T ss_dssp CEEEEE-EEEEETTEEEEEEEEEETTE-EEEEEECSSCC---------GGGGGTCBCCCSCSCEEECSSCEEEECCGGGG
T ss_pred cEEEEe-EEEeeCCcEEEEEEEEcCCe-eEEEEeecccC---------CchhceEeCCCCCceEEEECCEEEEEEEecCC
Confidence 999999 78888999999999999999 99999999993 47889999999 89999999999999999999
Q ss_pred cCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 241 RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 241 ~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+|||++|.++.+|||+|++|++|+.. +|..+.++||+||++||+++|.
T Consensus 150 ~fpe~~r~~~~~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv~~n~ 197 (262)
T 3ivz_A 150 FFPESARTLALKGADVIAHPANLVMP----YAPRAMPIRALENKVYTVTADR 197 (262)
T ss_dssp GSHHHHHHHHHTTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEEEEEC
T ss_pred CchHHHHHHHHCCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEEEECC
Confidence 99999999999999999999998652 7999999999999999999995
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=3e-41 Score=304.46 Aligned_cols=196 Identities=25% Similarity=0.310 Sum_probs=171.4
Q ss_pred CCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHH
Q 022660 80 VAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (294)
Q Consensus 80 ~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (294)
|++||||++|+++. +|.+.|++++.+++++| +.|+|||||||++++||.... ...++.. .++..+.|+++|+
T Consensus 1 M~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~~-~~~a~~~-----~~~~~~~l~~~a~ 73 (266)
T 2e11_A 1 MHDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNEA-IDKAEDM-----DGPTVAWIRTQAA 73 (266)
T ss_dssp CCCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSGG-GGGCEET-----TSHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChhH-HHhhccC-----CCHHHHHHHHHHH
Confidence 45699999999986 89999999999999999 899999999999999995322 2222222 3579999999999
Q ss_pred hcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeEEEeCCceEEEeeec
Q 022660 159 LLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICY 238 (294)
Q Consensus 159 ~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v~~~~~grigi~ICy 238 (294)
+++++|++| .++++++++||++++++++|+++ +|+|+||+++ +.|..+|.+|+++.+|+++++|+|++|||
T Consensus 74 ~~~~~iv~G-~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~-------~~E~~~f~~G~~~~v~~~~~~~ig~~ICy 144 (266)
T 2e11_A 74 RLGAAITGS-VQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF-------GNEHLRYAAGRERLCVEWKGWRINPQVCY 144 (266)
T ss_dssp HHTSEEEEE-EEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG-------GTTTTTSBCCCSCCCEEETTEEEEEEEGG
T ss_pred HhCCEEEEe-eeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC-------cChhhhccCCCCceEEEECCEEEEEEEEe
Confidence 999999999 56677889999999999999999 9999999874 36888999999999999999999999999
Q ss_pred cCcCcHHHHHHH---HC---CCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 239 DIRFQELAMIYG---AR---GAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 239 D~~fpe~~r~la---~~---Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|++|||+.|.++ ++ |||+|++|++|+.. ...+|..+.++||+||++|||++|.
T Consensus 145 D~~fpe~~r~~~~~~~~~~~ga~~i~~~s~w~~~-~~~~~~~~~~~rA~en~~~vv~an~ 203 (266)
T 2e11_A 145 DLRFPVFCRNRFDVERPGQLDFDLQLFVANWPSA-RAYAWKTLLRARAIENLCFVAAVNR 203 (266)
T ss_dssp GGGCTTTTCCCBSSSSTTSBSCSEEEEEECCCGG-GHHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred ccCCHHHHHHHHhhhhccCCCCcEEEEeCCCCCC-chHHHHHHHHHHHHhcCcEEEEEcC
Confidence 999999999864 54 99999999998654 4568999999999999999999985
No 7
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=2.5e-41 Score=325.90 Aligned_cols=210 Identities=35% Similarity=0.562 Sum_probs=184.5
Q ss_pred CCCCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCC-ccchhhhhccCCCCcHHHHHHHHH
Q 022660 78 PPVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS-FPVYAEDIDAGGDASPSTAMLSEV 156 (294)
Q Consensus 78 ~~~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 156 (294)
+.+++||||++|+++.+|.+.|++++.+++++|++.|+|||||||++++||...+ ....++..+ ++..+.|+++
T Consensus 10 m~~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~-----~~~~~~l~~~ 84 (440)
T 1ems_A 10 MATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-----CEYMEKYREL 84 (440)
T ss_dssp CCCSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred cccCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCC-----CHHHHHHHHH
Confidence 5567899999999988999999999999999999999999999999998875421 111222222 4688999999
Q ss_pred HHhcCcEEEEeeee--ee-eCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeE-EEeCCceE
Q 022660 157 ARLLKITIVGGSIP--ER-SGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTI-VDTDVGRI 232 (294)
Q Consensus 157 A~~~~i~Iv~Gs~~--~~-~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v-~~~~~gri 232 (294)
|++++++|++|+.. ++ +++++||++++++++|+++++|+|+||+++++|.+..|.|..+|.+|++..+ |+++++|+
T Consensus 85 A~~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~~~i 164 (440)
T 1ems_A 85 ARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRL 164 (440)
T ss_dssp HHHTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEE
T ss_pred HHHcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCceeEECCCeeE
Confidence 99999999999665 44 3578999999999999999999999999876787777889999999999888 99999999
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|++||||++|||++|.++.+|||+|++|++|+...+..+|..+.++||+||++|||++|.
T Consensus 165 G~~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~~~~~~~~~~~~arA~En~~~vv~an~ 224 (440)
T 1ems_A 165 GLSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQ 224 (440)
T ss_dssp CCCCGGGGGCHHHHHHHHHTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBB
T ss_pred EEEEeccccChHHHHHHHHcCCcEEEECCcCCCCCcHHHHHHHHHHHHHhcCcEEEEecc
Confidence 999999999999999999999999999999876656789999999999999999999985
No 8
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=4.5e-40 Score=314.34 Aligned_cols=205 Identities=27% Similarity=0.481 Sum_probs=169.6
Q ss_pred CCCCceEEEEEecccc--------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCC-----ccchhhhhccCC
Q 022660 78 PPVAKFKVGLCQLSVT--------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS-----FPVYAEDIDAGG 144 (294)
Q Consensus 78 ~~~~~~rValvQ~~v~--------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~-----~~~~~~~~~~~~ 144 (294)
...++||||++|+++. +|.+.|++++.+++++|++.|+|||||||++++||.... +..+++..
T Consensus 68 ~~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~---- 143 (405)
T 2vhh_A 68 RKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEA---- 143 (405)
T ss_dssp SCCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCT----
T ss_pred cCCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhc----
Confidence 3445799999999863 478999999999999999999999999999999985421 11222222
Q ss_pred CCcHHHHHHHHHHHhcCcEEEEeeeeeee---CCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCC
Q 022660 145 DASPSTAMLSEVARLLKITIVGGSIPERS---GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET 221 (294)
Q Consensus 145 ~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~---~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~ 221 (294)
.++++++.|+++|++++++|++| +.+++ ++++||++++|+++|+++++|+|+||++++ .|.|..+|.+|+.
T Consensus 144 ~~~~~~~~l~~lA~~~~i~Iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g-----~f~E~~~f~~G~~ 217 (405)
T 2vhh_A 144 ENGPTTKMLAELAKAYNMVIIHS-ILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVG-----DFNESTYYMEGNT 217 (405)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEE-EEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC---------------CCCCS
T ss_pred cCCHHHHHHHHHHHHCCEEEEEe-ceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCC-----CcCcccceeCCCC
Confidence 13689999999999999999999 56665 578999999999999999999999997653 5678899999985
Q ss_pred -CeEEEeCCceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 222 -PTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 222 -~~v~~~~~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+.+|+++++|||++||||++|||.+|.++.+|||+|++|++|....+..+|..++++||+||++|||++|.
T Consensus 218 ~~~vf~~~~~riG~~ICyD~~fPe~~r~la~~GAdill~psa~~~~~~~~~w~~l~raRAiEn~~~Vv~aN~ 289 (405)
T 2vhh_A 218 GHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINR 289 (405)
T ss_dssp CCCEEEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBCTTTHHHHHHHHHHHHHHHTSEEEEEEC
T ss_pred CCeeEEECCEEEEEEEeccccChHHHHHHHHcCCCEEEEcccCCCCCCHHHHHHHHHHHHHHcCceEEEecc
Confidence 89999999999999999999999999999999999999999876667789999999999999999999995
No 9
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=2.5e-39 Score=296.77 Aligned_cols=209 Identities=23% Similarity=0.287 Sum_probs=171.7
Q ss_pred CceEEEEEecccc---ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc-c---hhhhhccCCCCcHHHHHH
Q 022660 81 AKFKVGLCQLSVT---ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-V---YAEDIDAGGDASPSTAML 153 (294)
Q Consensus 81 ~~~rValvQ~~v~---~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~-~---~~~~~~~~~~~~~~~~~l 153 (294)
++||||++|+++. +|.+.|++++.+++++|++.|+|||||||++++||...++. . .....+. ...++.++.|
T Consensus 2 ~~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 80 (303)
T 1uf5_A 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYET-EMPGPVVRPL 80 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBS-SSSCTTTHHH
T ss_pred ccEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhh-cCCCHHHHHH
Confidence 3689999999975 69999999999999999999999999999999999654310 0 0111111 1135788999
Q ss_pred HHHHHhcCcEEEEeeeeeee-CC---eeEEEEEEEccCCcEEEEEeecccCCCC--CCCcccc--ccccCccCCC-CCeE
Q 022660 154 SEVARLLKITIVGGSIPERS-GD---RLYNTCCVFGSDGKLIAKHRKIHLFDID--IPGKITF--IESKSLTAGE-TPTI 224 (294)
Q Consensus 154 ~~lA~~~~i~Iv~Gs~~~~~-~~---~~yNsa~vi~~~G~il~~y~K~~L~~~~--~P~~~~f--~E~~~f~~G~-~~~v 224 (294)
+++|++++++|++| +++++ ++ ++||++++++++|+++++|+|+||++++ +|.. .| .|..+|.+|+ ++.+
T Consensus 81 ~~~a~~~~~~iv~G-~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~~-~~~~~E~~~f~~G~~~~~v 158 (303)
T 1uf5_A 81 FEKAAELGIGFNLG-YAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYR-PFQHLEKRYFEPGDLGFPV 158 (303)
T ss_dssp HHHHHHHTCEEEEE-EEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTC-SSCCCHHHHCCCCSSCSCE
T ss_pred HHHHHHhCeEEEEe-eeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCcccccccc-cccccchhhccCCCCCCce
Confidence 99999999999999 45553 45 8999999999999999999999995332 3432 33 6888999999 8999
Q ss_pred EEeCCceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCC---CCCCC------CHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 225 VDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGA---FNMTT------GPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 225 ~~~~~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~---~~~~~------~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|+++++|+|++||||++|||++|.++++|||+|+++++ |+... ...+|..+.++||+||++|||++|.
T Consensus 159 ~~~~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~ 235 (303)
T 1uf5_A 159 YDVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGK 235 (303)
T ss_dssp EEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEB
T ss_pred EecCCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECc
Confidence 99999999999999999999999999999999966554 44443 4568888899999999999999985
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=5.5e-38 Score=292.80 Aligned_cols=196 Identities=21% Similarity=0.300 Sum_probs=166.2
Q ss_pred CCceEEEEEecccc-----ccHHHHHHHHHHHHHHHHH--CCCcEEEcCCCCCCCCCCCC--ccchhhhhccCCCCcHHH
Q 022660 80 VAKFKVGLCQLSVT-----ADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPST 150 (294)
Q Consensus 80 ~~~~rValvQ~~v~-----~d~~~n~~~i~~~i~~A~~--~gadLVVfPE~~l~gy~~~~--~~~~~~~~~~~~~~~~~~ 150 (294)
.++||||++|+++. +|.+.|++++.+++++|++ .|+|||||||++++||..+. ...+++. .+++.+
T Consensus 11 ~~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~-----~~~~~~ 85 (334)
T 2dyu_A 11 IEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLD-----VPGKET 85 (334)
T ss_dssp --CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTTTSGGGCBC-----SSSHHH
T ss_pred CCccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChhHHHHhhcc-----CCCHHH
Confidence 34699999999852 6889999999999999987 79999999999999986543 2222222 235799
Q ss_pred HHHHHHHHhcCcEEEEeeeeeee-CCe--eEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCe-EEE
Q 022660 151 AMLSEVARLLKITIVGGSIPERS-GDR--LYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT-IVD 226 (294)
Q Consensus 151 ~~l~~lA~~~~i~Iv~Gs~~~~~-~~~--~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~-v~~ 226 (294)
+.|+++|+++++++++| +++++ +++ +||++++++++|+++.+|+|+|||+ |..+|.+|++.. +|+
T Consensus 86 ~~l~~~a~~~~i~iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~----------e~~~f~~G~~~~~v~~ 154 (334)
T 2dyu_A 86 ELYAKACKEAKVYGVFS-IMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN----------PIEPWYPGDLGMPVCE 154 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-EEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCCCCCSCCCCEE
T ss_pred HHHHHHHHHhCeEEEEe-eEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC----------CcccCcCCCCCceeEE
Confidence 99999999999999999 55664 344 9999999999999999999999854 345689998755 999
Q ss_pred eC-CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 227 TD-VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 227 ~~-~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
++ +.|+|++||||++|||++|.++.+|||+|++|++|+.. ...+|..+.++||+||++|||++|.
T Consensus 155 ~~~g~~iG~~ICyD~~fpe~~r~~~~~Gadlil~psaw~~~-~~~~~~~~~~arA~En~~~vv~an~ 220 (334)
T 2dyu_A 155 GPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNL 220 (334)
T ss_dssp CGGGCEEEEEEGGGGGCHHHHHHHHHTTCSEEEEEESSCTT-SHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCCEEEEEEECCCCchHHHHHHHHcCCCEEEEeCCCCCC-cHHHHHHHHHHHHHhCCCEEEEECC
Confidence 85 55999999999999999999999999999999998643 5679999999999999999999996
No 11
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=3.3e-38 Score=316.57 Aligned_cols=201 Identities=21% Similarity=0.273 Sum_probs=170.1
Q ss_pred CCCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHH
Q 022660 79 PVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (294)
Q Consensus 79 ~~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (294)
+|++||||++|+++. +|.+.|++++.+++++|+++|||||||||++++||.+.++.. .+.+. ++..+.|+++|
T Consensus 2 ~M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~-~~~~~-----~~~~~~l~~la 75 (634)
T 3ilv_A 2 SLSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFL-TDWVA-----ETAIEYCFEIA 75 (634)
T ss_dssp --CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGG-SHHHH-----HHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhh-Chhhh-----HHHHHHHHHHH
Confidence 367899999999987 899999999999999999999999999999999999876532 22222 35788999999
Q ss_pred Hhc-CcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCC--------------
Q 022660 158 RLL-KITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP-------------- 222 (294)
Q Consensus 158 ~~~-~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~-------------- 222 (294)
+++ +++|++| ++++.++++||+++++ ++|++++.|+|+||++++ .|.|.++|.+|+..
T Consensus 76 ~~~~~i~ivvG-~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~~-----~f~E~r~f~pG~~~~~~~~~~~g~~~p~ 148 (634)
T 3ilv_A 76 ASCTDITVSLG-LPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANEG-----VHYETRWFTAWPRNHTTTFLYNDVKYPF 148 (634)
T ss_dssp TTCTTSEEEEE-EEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCST-----TCCGGGTCCCCCTTCEEEEEETTEEEEE
T ss_pred HhCCCCEEEEe-eeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCCC-----CcChhhhcCCCCccccceecccCccccc
Confidence 996 9999999 7888899999999999 799999999999996654 68899999999875
Q ss_pred --eEEEeCCceEEEeeeccCcCcH-HHHHHHHCCCeEEEEcCCCCCCCCH-HHHHHHHHHHHHHhCCeeEeecc
Q 022660 223 --TIVDTDVGRIGIGICYDIRFQE-LAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 223 --~v~~~~~grigi~ICyD~~fpe-~~r~la~~Gadlil~ps~~~~~~~~-~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.+|+++++|||+.||||+|||+ +++.++.+|||+|++|++|++..+. .+|..+.++||+||++|+|++|.
T Consensus 149 g~~vf~~~g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~ 222 (634)
T 3ilv_A 149 GDVLYNVKDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANL 222 (634)
T ss_dssp ESCCEEETTEEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred CCeEEEECCEEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcC
Confidence 6899999999999999999998 9999999999999999999877665 68999999999999999999995
No 12
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=3.2e-38 Score=295.23 Aligned_cols=197 Identities=18% Similarity=0.167 Sum_probs=168.2
Q ss_pred CCCceEEEEEeccc-----cccHHHHHHHHHHHHHHHHH--CCCcEEEcCCCCCCCCCCCC--ccchhhhhccCCCCcHH
Q 022660 79 PVAKFKVGLCQLSV-----TADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPS 149 (294)
Q Consensus 79 ~~~~~rValvQ~~v-----~~d~~~n~~~i~~~i~~A~~--~gadLVVfPE~~l~gy~~~~--~~~~~~~~~~~~~~~~~ 149 (294)
+.++||||++|+++ .+|.+.|++++.+++++|++ .|+|||||||++++||.... +..+++. .+++.
T Consensus 9 ~~~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~-----~~~~~ 83 (341)
T 2uxy_A 9 SNDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVA-----IPGEE 83 (341)
T ss_dssp CTTEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSHHHHHHHCBC-----SSSHH
T ss_pred CCCccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCHHHHHHHhcc-----CCCHH
Confidence 34679999999985 26899999999999999987 79999999999999976432 1122222 23579
Q ss_pred HHHHHHHHHhcCcEEEEeeee-eeeC----CeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeE
Q 022660 150 TAMLSEVARLLKITIVGGSIP-ERSG----DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTI 224 (294)
Q Consensus 150 ~~~l~~lA~~~~i~Iv~Gs~~-~~~~----~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v 224 (294)
++.|+++|+++++++++| +. ++.+ +++||++++++++|+++.+|+|+|||+ |..+|.+|++..+
T Consensus 84 ~~~l~~~a~~~~i~iv~G-~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~----------e~~~f~pG~~~~v 152 (341)
T 2uxy_A 84 TEIFSRACRKANVWGVFS-LTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC----------PIEGWYPGGQTYV 152 (341)
T ss_dssp HHHHHHHHHHHTCEEEEE-EEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCBCCCCCCC
T ss_pred HHHHHHHHHHhCcEEEEE-eeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC----------CccceeCCCCceE
Confidence 999999999999999998 45 5542 349999999999999999999999854 4457899999999
Q ss_pred EEeC-CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 225 VDTD-VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 225 ~~~~-~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|+++ +.|||++||||++|||++|.++.+|||+|++|++|+. ....+|..+.++||+||++|||++|.
T Consensus 153 ~~~~~G~riG~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~-~~~~~~~~l~~arA~En~~~vv~an~ 220 (341)
T 2uxy_A 153 SEGPKGMKISLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMY-PAKDQQVMMAKAMAWANNCYVAVANA 220 (341)
T ss_dssp EECGGGCEEEEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBT-TCHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EECCCCCEEEEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCC-CcHHHHHHHHHHHHHhCCcEEEEECC
Confidence 9995 5599999999999999999999999999999999865 35789999999999999999999995
No 13
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=2.2e-37 Score=306.76 Aligned_cols=199 Identities=24% Similarity=0.320 Sum_probs=170.7
Q ss_pred CceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHH-
Q 022660 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR- 158 (294)
Q Consensus 81 ~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~- 158 (294)
.+||||++|+++. +|++.|++++.+++++|+++|||||||||++++||+++++......+. ...+.+.++++
T Consensus 5 MkmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~------~~~~~l~~la~~ 78 (565)
T 4f4h_A 5 MKTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYA------ASDAALAELAAQ 78 (565)
T ss_dssp -CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHH------HHHHHHHHHHHH
T ss_pred cceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHH------HHHHHHHHHHHH
Confidence 3699999999976 999999999999999999999999999999999999887643222222 13333444443
Q ss_pred ---hcCcEEEEeeeeeeeC----------------CeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCC
Q 022660 159 ---LLKITIVGGSIPERSG----------------DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAG 219 (294)
Q Consensus 159 ---~~~i~Iv~Gs~~~~~~----------------~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G 219 (294)
..++++++| .+.+.. +++||+++++. +|++++.|+|+|| |++..|.|.++|.+|
T Consensus 79 ~~~~~~i~ivvG-~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hL-----p~~~~f~E~r~f~~G 151 (565)
T 4f4h_A 79 LKPFAGLAVLVG-HPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDL-----PNTEVFDEKRYFATD 151 (565)
T ss_dssp HTTSTTCEEEEE-EEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSC-----CCSTTCCGGGTCCCC
T ss_pred hhhcCCcEEEEe-eeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeec-----CCCcccceeccccCC
Confidence 357899998 565432 35999999996 7999999999999 555689999999999
Q ss_pred CCCeEEEeCCceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCH-HHHHHHHHHHHHHhCCeeEeecc
Q 022660 220 ETPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 220 ~~~~v~~~~~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~-~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+.+.+|+++++|||+.||||+||||.+|.++.+||++|++|++++...+. .+|..+.++||+||++|+|.+|+
T Consensus 152 ~~~~v~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~ 225 (565)
T 4f4h_A 152 AAPYVFELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNL 225 (565)
T ss_dssp CCCCEEEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CcceeEEecCcEEEEEEeehhcccchhHHHHhCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeee
Confidence 99999999999999999999999999999999999999999999988886 68889999999999999999996
No 14
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=1.3e-37 Score=310.11 Aligned_cols=199 Identities=23% Similarity=0.257 Sum_probs=176.5
Q ss_pred CceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHh
Q 022660 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (294)
Q Consensus 81 ~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (294)
.+||||++|+++. +|++.|++++.+++++|+++|||||||||++++||.+.++....+.. ++..+.|+++|++
T Consensus 3 ~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~------~~~~~~l~~la~~ 76 (590)
T 3n05_A 3 LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV------EASRTALRELAAR 76 (590)
T ss_dssp EEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH------HHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH------HHHHHHHHHHHHh
Confidence 4699999999986 99999999999999999999999999999999999987654433322 2578889999999
Q ss_pred c--C----cEEEEeeeeeeeC----------CeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCe
Q 022660 160 L--K----ITIVGGSIPERSG----------DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT 223 (294)
Q Consensus 160 ~--~----i~Iv~Gs~~~~~~----------~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~ 223 (294)
+ + ++|++|+ +++.+ +++||++++++ +|++++.|+|+||++++ .|.|.++|.+|+++.
T Consensus 77 ~~~~~~~~i~ivvG~-~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~~-----~f~E~r~f~~G~~~~ 149 (590)
T 3n05_A 77 LAEEGFGELPVLVGY-LDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNYG-----VFDEFRYFVPGDTMP 149 (590)
T ss_dssp HHHTTCTTSCEEEEE-EEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSSS-----SCCHHHHCCCCCEEE
T ss_pred hhhccCCceEEEEee-EEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCCC-----ccCccccccCCCcce
Confidence 8 6 9999994 55542 37999999998 99999999999996654 688999999999999
Q ss_pred EEEeCCceEEEeeeccCcC-cHHHHHHHHCCCeEEEEcCCCCCCCCH-HHHHHHHHHHHHHhCCeeEeecc
Q 022660 224 IVDTDVGRIGIGICYDIRF-QELAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 224 v~~~~~grigi~ICyD~~f-pe~~r~la~~Gadlil~ps~~~~~~~~-~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+|+++++|||++||||+|| |++.+.++.+|||+|++|++|++..+. .+|..+.++||+||++|+|++|.
T Consensus 150 v~~~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~ 220 (590)
T 3n05_A 150 IVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAM 220 (590)
T ss_dssp EEEETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEEC
T ss_pred EEEECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEec
Confidence 9999999999999999999 999999999999999999998876553 68899999999999999999996
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=5.6e-35 Score=294.90 Aligned_cols=204 Identities=21% Similarity=0.213 Sum_probs=172.5
Q ss_pred CCCCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHH
Q 022660 78 PPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (294)
Q Consensus 78 ~~~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (294)
+.++.||||++|+++. +|++.|++++.+++++|+++|+|||||||++++||.+.++....+.++. ..+.++.|.++
T Consensus 8 ~~~g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~---~~~~l~~l~~~ 84 (680)
T 3sdb_A 8 YQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDA---VEDALLDLVTE 84 (680)
T ss_dssp GGGTEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHH---HHHHHHHHHHH
T ss_pred hhCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHh---hHHHHHHHHHH
Confidence 4567899999999987 9999999999999999999999999999999999998765332222221 13688999999
Q ss_pred HHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCe-------------
Q 022660 157 ARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT------------- 223 (294)
Q Consensus 157 A~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~------------- 223 (294)
|++++++|++| .+++.++++||++++++ +|++++.|+|+||++++ .|.|.++|.+|++..
T Consensus 85 a~~~~i~ivvG-~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~~-----~f~E~r~F~~G~~~~~~i~~~g~~vpfg 157 (680)
T 3sdb_A 85 SADLLPVLVVG-APLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTYR-----EFYERRQMAPGDGERGTIRIGGADVAFG 157 (680)
T ss_dssp HTTCSSEEEEE-EEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEET-----TEEGGGTEECCTTCCSEEEETTEEEEBS
T ss_pred hhcCCcEEEEe-ceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCCC-----ccChhhhcCCCCCCCceeeecCcccccC
Confidence 99999999999 68888899999999999 99999999999996654 788999999998752
Q ss_pred ---EE---EeCCceEEEeeeccCcCcHHH-HHHHHCCCeEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCeeEeec
Q 022660 224 ---IV---DTDVGRIGIGICYDIRFQELA-MIYGARGAHLICYPGAFNMTTGPLH-WELLQRARATDNQVLPHSPF 291 (294)
Q Consensus 224 ---v~---~~~~grigi~ICyD~~fpe~~-r~la~~Gadlil~ps~~~~~~~~~~-~~~l~~~RAiEn~~~vv~an 291 (294)
+| +++++|||+.||||+|||+.. +.++.+|||+|++|++|+...+..+ |..+.+.|+.+++..+|.+|
T Consensus 158 ~~~vf~~~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~ 233 (680)
T 3sdb_A 158 TDLLFAASDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAA 233 (680)
T ss_dssp SCEEEEETTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred CceeEeeeccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEE
Confidence 46 688999999999999999996 8999999999999999988777754 45677888788654444444
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=79.91 E-value=8.4 Score=33.65 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=44.1
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCe-eEEEEEEE
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVF 184 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi 184 (294)
..+..+.+|+|+|+.|=.+...+. . .....++.-|.+++++++..+..-.+++. .+-...++
T Consensus 173 ~~r~l~~~Ga~li~~ps~~~~~~~--------~---------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii 235 (283)
T 3hkx_A 173 MVRAAAARGAQLVLVPTALAGDET--------S---------VPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVV 235 (283)
T ss_dssp HHHHHHHTTCSEEEEECCCBSCCT--------H---------HHHTHHHHHHHHHTCEEEEECBEEEETTEEEECCCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCccc--------H---------HHHHHHHHHHHHhCCEEEEEccccCCCCeEEeeEEEEE
Confidence 344456789999999976432211 0 13345666789999998865333233332 23345788
Q ss_pred ccCCcEEEE
Q 022660 185 GSDGKLIAK 193 (294)
Q Consensus 185 ~~~G~il~~ 193 (294)
+|+|+++..
T Consensus 236 ~p~G~vl~~ 244 (283)
T 3hkx_A 236 GPAGQPLGE 244 (283)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEe
Confidence 999998753
No 17
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=76.36 E-value=11 Score=33.13 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=48.1
Q ss_pred ceEEEEEeccc------cccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHH
Q 022660 82 KFKVGLCQLSV------TADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSE 155 (294)
Q Consensus 82 ~~rValvQ~~v------~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (294)
.++|..++... ..+.+...+.+++.++.|.+.|++.|++|-. +. ......+... -..++.+.+
T Consensus 89 GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~--~~~~~~~~~~-------~~~l~~l~~ 157 (305)
T 3obe_A 89 GLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--PR--IENEDDAKVV-------SEIFNRAGE 157 (305)
T ss_dssp TCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--CC--CSSHHHHHHH-------HHHHHHHHH
T ss_pred CCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--CC--CCCHHHHHHH-------HHHHHHHHH
Confidence 46776666543 1345677888999999999999999999722 11 1111111111 136777888
Q ss_pred HHHhcCcEEEE
Q 022660 156 VARLLKITIVG 166 (294)
Q Consensus 156 lA~~~~i~Iv~ 166 (294)
.|+++|+.+.+
T Consensus 158 ~a~~~Gv~l~l 168 (305)
T 3obe_A 158 ITKKAGILWGY 168 (305)
T ss_dssp HHHTTTCEEEE
T ss_pred HHHHcCCEEEE
Confidence 89999998865
No 18
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=71.39 E-value=8.8 Score=33.50 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=42.8
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCC-eeEEEEEEEcc
Q 022660 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFGS 186 (294)
Q Consensus 108 ~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~-~~yNsa~vi~~ 186 (294)
+..+.+|+|+|+.|=.+.. . .. ......++.-|.+++++++..+....+++ .++-...+++|
T Consensus 176 r~~~~~Gadli~~psa~~~----~----~~---------~~~~~~~~arA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p 238 (281)
T 3p8k_A 176 RYPARSGAKIAFYVAQWPM----S----RL---------QHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINP 238 (281)
T ss_dssp HHHHHTTCCEEEEEECCBG----G----GH---------HHHHHHHHHHHHHHTSEEEEEECEEECSSCEEECCCEEECT
T ss_pred HHHHHCCCCEEEECCCCCC----c----cH---------HHHHHHHHHHHHHcCCEEEEEccCcCCCCcEEeeeEEEECC
Confidence 3456789999999954321 0 00 12334566788999999886433222333 34455678899
Q ss_pred CCcEEEE
Q 022660 187 DGKLIAK 193 (294)
Q Consensus 187 ~G~il~~ 193 (294)
+|+++..
T Consensus 239 ~G~vl~~ 245 (281)
T 3p8k_A 239 NGDLVGE 245 (281)
T ss_dssp TSCEEEE
T ss_pred CCCEEEe
Confidence 9998754
No 19
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=70.70 E-value=14 Score=33.32 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=43.4
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCC-eeEEEEEEE
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVF 184 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~-~~yNsa~vi 184 (294)
..+.++.+|||+||.|=.+.. .. . ......++.-|.+++++++.-+..-.+++ .++-...++
T Consensus 174 ~~r~l~~~Gadlll~psa~~~----~~----~---------~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQGYMY----PA----K---------DQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAII 236 (341)
T ss_dssp HHHHHHHTTCSEEEEEECCBT----TC----H---------HHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCC----Cc----H---------HHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEE
Confidence 344456789999999854311 10 0 12445567788999999876533222222 344456778
Q ss_pred ccCCcEEE
Q 022660 185 GSDGKLIA 192 (294)
Q Consensus 185 ~~~G~il~ 192 (294)
+|+|+++.
T Consensus 237 dp~G~vla 244 (341)
T 2uxy_A 237 GFDGRTLG 244 (341)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 99999875
No 20
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=70.32 E-value=12 Score=32.00 Aligned_cols=67 Identities=15% Similarity=0.098 Sum_probs=41.9
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCe-eEEEEEEEc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFG 185 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi~ 185 (294)
.+..+.+|+|+|+.|=.+... .....++.-|.+++++++.-+....+++. .+-...+++
T Consensus 155 ~r~~~~~ga~li~~ps~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~ 214 (262)
T 3ivz_A 155 ARTLALKGADVIAHPANLVMP--------------------YAPRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIAS 214 (262)
T ss_dssp HHHHHHTTCSEEEEEECCCSS--------------------CHHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEEC
T ss_pred HHHHHHCCCCEEEEcCCCCch--------------------HHHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEEC
Confidence 344567899999999764221 02334567788999998765322222222 233457789
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
|+|+++..
T Consensus 215 p~G~il~~ 222 (262)
T 3ivz_A 215 PKAEVLSM 222 (262)
T ss_dssp TTSCEEEE
T ss_pred CCCCEeec
Confidence 99998743
No 21
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=66.39 E-value=26 Score=34.07 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=45.3
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeE-EEEEEEc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLY-NTCCVFG 185 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~y-Nsa~vi~ 185 (294)
.+.++.+|||||+.|=.+. +.... .......++.-|.+++++++.-+....+++..| -..++++
T Consensus 173 ~~~la~~Ga~ii~~psa~p--~~~gk-------------~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iid 237 (590)
T 3n05_A 173 VPAARSAGAGLLLSVNASP--YERDK-------------DDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVD 237 (590)
T ss_dssp HHHHHHTTCSEEEEEECCB--CCCCS-------------SCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEEC
T ss_pred HHHHHHcCCCEEEEecCCc--cccCc-------------HHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEEC
Confidence 3345678999999885532 21111 012455678889999999876533333344443 4567889
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
|+|+++..
T Consensus 238 p~G~vla~ 245 (590)
T 3n05_A 238 RDGEVVAR 245 (590)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99998764
No 22
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=63.73 E-value=20 Score=30.83 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|+++=. ..+.........+.+ -..++.+.+.|+++|+.+.+=
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 166 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGY--DVYYQEANNETRRRF------RDGLKESVEMASRAQVTLAME 166 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCC--SCSSSCCCHHHHHHH------HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--CCCcCcCHHHHHHHH------HHHHHHHHHHHHHhCCEEEEe
Confidence 466788999999999999999998711 111111111111111 136677888889999987653
No 23
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=62.72 E-value=14 Score=36.00 Aligned_cols=72 Identities=18% Similarity=0.245 Sum_probs=46.3
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCe-eEEEEEEEc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFG 185 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi~ 185 (294)
.+.++..||++|+-|=.+. +.... . ......++.-|.+++++++.-.....+++. ++-..++++
T Consensus 178 ~r~la~~GA~ii~~psAs~--~~~gk---~----------~~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~iid 242 (565)
T 4f4h_A 178 AQLAKAAGAQVLIVPNGSP--YHMNK---D----------AVRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLD 242 (565)
T ss_dssp HHHHHHTTCSEEEEEECCB--CCTTH---H----------HHHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEEC
T ss_pred hHHHHhCCCeeeecccccc--cccCc---H----------HHHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCcceec
Confidence 3445678999999986432 11110 0 124456778899999988764333334444 556778999
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
++|+++..
T Consensus 243 p~G~vla~ 250 (565)
T 4f4h_A 243 GAGELVAK 250 (565)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99998754
No 24
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=61.85 E-value=19 Score=32.20 Aligned_cols=71 Identities=13% Similarity=0.050 Sum_probs=43.3
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeC-CeeEEEEEEE
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSG-DRLYNTCCVF 184 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~-~~~yNsa~vi 184 (294)
..+..+.+||||||.|=.+... . . ......++.-|.+++++++.-+..-.++ ..++-...++
T Consensus 174 ~~r~~~~~Gadlil~psaw~~~----~----~---------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Ii 236 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISGYSTQ----V----N---------DQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQIC 236 (334)
T ss_dssp HHHHHHHTTCSEEEEEESSCTT----S----H---------HHHHHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCCCCC----c----H---------HHHHHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEE
Confidence 3444566899999998653211 0 0 1244456778899999987643221222 2344556778
Q ss_pred ccCCcEEEE
Q 022660 185 GSDGKLIAK 193 (294)
Q Consensus 185 ~~~G~il~~ 193 (294)
+|+|+++..
T Consensus 237 dp~G~vla~ 245 (334)
T 2dyu_A 237 NFDGTTLVQ 245 (334)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEeee
Confidence 999998753
No 25
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=61.48 E-value=30 Score=28.91 Aligned_cols=61 Identities=10% Similarity=-0.051 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc--cchhhhhccCCCCcHHHHHHHHHHHhcCcEEEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~--~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~ 166 (294)
.+..++.+++.++.|.+.|++.|++. +|...... ....+.+ -..++.+.+.|+++|+.+.+
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF------IDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEE
Confidence 46778899999999999999999873 23222111 1111111 13667788889999998865
No 26
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=60.58 E-value=22 Score=30.32 Aligned_cols=64 Identities=16% Similarity=0.061 Sum_probs=40.4
Q ss_pred CCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCC--eeEEEEEEEccCCcE
Q 022660 113 KGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD--RLYNTCCVFGSDGKL 190 (294)
Q Consensus 113 ~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~--~~yNsa~vi~~~G~i 190 (294)
.|+|+|+.|=.|... .. ......++.-|.+++++++.-.....+++ ..+-...+++|+|++
T Consensus 164 ~ga~~i~~~s~w~~~--------~~---------~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v 226 (266)
T 2e11_A 164 LDFDLQLFVANWPSA--------RA---------YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQP 226 (266)
T ss_dssp BSCSEEEEEECCCGG--------GH---------HHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCC--------ch---------HHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCce
Confidence 399999988764211 00 12344566788999999886533222322 344567889999998
Q ss_pred EEE
Q 022660 191 IAK 193 (294)
Q Consensus 191 l~~ 193 (294)
+..
T Consensus 227 ~~~ 229 (266)
T 2e11_A 227 QVE 229 (266)
T ss_dssp EEE
T ss_pred eee
Confidence 753
No 27
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.14 E-value=41 Score=28.40 Aligned_cols=62 Identities=10% Similarity=-0.014 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCC-CccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD-SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~-~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+++.++.|.+.|++.|++. +|.... +.....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v~~~----~g~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTLHAM----SGITEGLDRKACEETF------IENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECC----BCBCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEc----cCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 46778889999999999999999873 221111 111111111 136777888889999987653
No 28
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=59.35 E-value=43 Score=28.97 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=26.7
Q ss_pred HHHHHHHhcCcEEEEeeeeeeeCC-eeEEEEEEEccCCcEEE
Q 022660 152 MLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFGSDGKLIA 192 (294)
Q Consensus 152 ~l~~lA~~~~i~Iv~Gs~~~~~~~-~~yNsa~vi~~~G~il~ 192 (294)
.++.-|.+++++++..+..-.+++ .++-...+++|+|+++.
T Consensus 218 ~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~ 259 (303)
T 1uf5_A 218 SMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVA 259 (303)
T ss_dssp HHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEE
T ss_pred HHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEec
Confidence 456678999999986532222222 33344677899999875
No 29
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=58.56 E-value=30 Score=29.50 Aligned_cols=62 Identities=15% Similarity=0.004 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+++.++.|.+.|++.|++. +|+.........+.+ -..++.+.+.|+++|+.+.+=
T Consensus 97 r~~~~~~~~~~i~~a~~lG~~~v~~~----~G~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 158 (290)
T 3tva_A 97 RASRVAEMKEISDFASWVGCPAIGLH----IGFVPESSSPDYSEL------VRVTQDLLTHAANHGQAVHLE 158 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEC----CCCCCCTTSHHHHHH------HHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEc----CCCCcccchHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 46778999999999999999999874 233222211111111 136777888889999988764
No 30
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=57.52 E-value=7.4 Score=33.93 Aligned_cols=69 Identities=20% Similarity=0.198 Sum_probs=40.7
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeee--eCCeeEEEEEEEc
Q 022660 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPER--SGDRLYNTCCVFG 185 (294)
Q Consensus 108 ~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~--~~~~~yNsa~vi~ 185 (294)
+....+|+|+|+.|-.+.. . ... ......++.-|.+++++++..+.... ++..++-...+++
T Consensus 179 r~l~~~Ga~ll~~ps~~~~-----~----~~~-------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 242 (291)
T 1f89_A 179 MLSARKGAFAMIYPSAFNT-----V----TGP-------LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVD 242 (291)
T ss_dssp HHHHHTTEEEEEEECCCBT-----T----HHH-------HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEEC
T ss_pred HHHHhhCCCEEEECCcCCC-----C----CcH-------HHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEEC
Confidence 3445789999999953211 0 000 02344566678899999886422111 1123444567899
Q ss_pred cCCcEEE
Q 022660 186 SDGKLIA 192 (294)
Q Consensus 186 ~~G~il~ 192 (294)
|+|+++.
T Consensus 243 p~G~vl~ 249 (291)
T 1f89_A 243 PRGKIVA 249 (291)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 9999875
No 31
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=56.84 E-value=40 Score=26.57 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=44.3
Q ss_pred EEEEEecccc--------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHH
Q 022660 84 KVGLCQLSVT--------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSE 155 (294)
Q Consensus 84 rValvQ~~v~--------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (294)
.+.+++.... .+.+...+.+.++++.+.+.++.+|++--.................+ ..+-+.+++
T Consensus 76 d~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~------~~~n~~l~~ 149 (204)
T 3p94_A 76 KAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKV------IQLNKWIKE 149 (204)
T ss_dssp EEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHH------HHHHHHHHH
T ss_pred CEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHH------HHHHHHHHH
Confidence 5667776532 24566677777777777778999988742221111110000111112 146678899
Q ss_pred HHHhcCcEEE
Q 022660 156 VARLLKITIV 165 (294)
Q Consensus 156 lA~~~~i~Iv 165 (294)
+|+++++.++
T Consensus 150 ~a~~~~v~~i 159 (204)
T 3p94_A 150 YADKNGLTYV 159 (204)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHcCCcEE
Confidence 9999988765
No 32
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=54.46 E-value=9.3 Score=33.04 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=40.6
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeee--CCeeEEEEEEEc
Q 022660 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS--GDRLYNTCCVFG 185 (294)
Q Consensus 108 ~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~--~~~~yNsa~vi~ 185 (294)
+....+|+|+|+.|-.+.. . ... ......++.-|.+++++++..+....+ +..++-...+++
T Consensus 163 r~~~~~ga~ll~~ps~~~~----~-----~~~-------~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~ 226 (276)
T 2w1v_A 163 QIYAQRGCQLLVYPGAFNL----T-----TGP-------AHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVD 226 (276)
T ss_dssp HHHHHTTEEEEEEECCCCT----T-----HHH-------HHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEEC
T ss_pred HHHHHcCCCEEEECCcCCC----c-----CCH-------HHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEEC
Confidence 4445789999999953211 0 000 023344566788999998865322111 123344567789
Q ss_pred cCCcEEE
Q 022660 186 SDGKLIA 192 (294)
Q Consensus 186 ~~G~il~ 192 (294)
|+|+++.
T Consensus 227 p~G~v~~ 233 (276)
T 2w1v_A 227 PWGQVLT 233 (276)
T ss_dssp TTSCEEE
T ss_pred CCCCEeE
Confidence 9999875
No 33
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=54.14 E-value=25 Score=29.55 Aligned_cols=65 Identities=23% Similarity=0.202 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+++.++.|.+.|++.|+++=...+.. ..+.....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGG-SKNIDAARRMV------VEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTT-CCCHHHHHHHH------HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCC-CcCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 356678899999999999999888762221110 01111111111 136778888899999988764
No 34
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=53.79 E-value=29 Score=29.47 Aligned_cols=64 Identities=13% Similarity=-0.010 Sum_probs=41.2
Q ss_pred ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCC--ccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 94 ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 94 ~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~--~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+.+..++.+++.++.|.+.|++.|++. +|..... .....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 77 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 142 (286)
T 3dx5_A 77 ADFEKTIEKCEQLAILANWFKTNKIRTF----AGQKGSADFSQQERQEY------VNRIRMICELFAQHNMYVLLE 142 (286)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCEEEEC----SCSSCGGGSCHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEc----CCCCCcccCcHHHHHHH------HHHHHHHHHHHHHhCCEEEEe
Confidence 4567788999999999999999998651 2222111 01111111 136677888889999987653
No 35
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.61 E-value=42 Score=28.54 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCC--CccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD--SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~--~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+.+.++.|...|++.|+++=... .+... +.....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 100 ~~~~~~~~~~i~~a~~lGa~~v~~~~g~~-~~~~~~p~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 100 KECMDTMKEIIAAAGELGSTGVIIVPAFN-GQVPALPHTMETRDFL------CEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECSCCT-TCCSBCCSSHHHHHHH------HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCcC-CcCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 56788899999999999999888752211 11100 111111111 136778888899999987653
No 36
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=51.89 E-value=12 Score=34.93 Aligned_cols=70 Identities=16% Similarity=0.171 Sum_probs=41.7
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeee-CC-eeEEEEEEEc
Q 022660 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GD-RLYNTCCVFG 185 (294)
Q Consensus 108 ~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~-~~-~~yNsa~vi~ 185 (294)
+....+|+|+|+.|-.+.. .... ......++.-|.+++++++.-+....+ ++ .++-...+++
T Consensus 179 r~l~~~Ga~il~~psa~~~---------~~~~-------~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~ 242 (440)
T 1ems_A 179 LWNRKRGAQLLSFPSAFTL---------NTGL-------AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVD 242 (440)
T ss_dssp HHHHHTTCSEEECCBCCCH---------HHHH-------HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEEC
T ss_pred HHHHHcCCcEEEECCcCCC---------CCcH-------HHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEEC
Confidence 3345789999998854210 0000 013345566789999999865332222 22 2333567899
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
|+|+++..
T Consensus 243 P~G~vla~ 250 (440)
T 1ems_A 243 PWGAVVAQ 250 (440)
T ss_dssp TTSCEEEE
T ss_pred CCCCeecc
Confidence 99998764
No 37
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=51.58 E-value=50 Score=27.58 Aligned_cols=74 Identities=14% Similarity=0.074 Sum_probs=43.7
Q ss_pred ceEEEEEecc--ccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHh
Q 022660 82 KFKVGLCQLS--VTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (294)
Q Consensus 82 ~~rValvQ~~--v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (294)
.++|..++.. .....+...+.+++.++.|.+-|++.|++ .+|+... ..+... . -..++.+.+.|++
T Consensus 64 gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~----~~g~~~~--~~~~~~-~-----~~~l~~l~~~a~~ 131 (272)
T 2q02_A 64 GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVL----CPLNDGT--IVPPEV-T-----VEAIKRLSDLFAR 131 (272)
T ss_dssp TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEE----CCCCSSB--CCCHHH-H-----HHHHHHHHHHHHT
T ss_pred CCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEE----ccCCCch--hHHHHH-H-----HHHHHHHHHHHHH
Confidence 3677555532 22112345678899999999999998885 1222111 111111 0 1366778888899
Q ss_pred cCcEEEEe
Q 022660 160 LKITIVGG 167 (294)
Q Consensus 160 ~~i~Iv~G 167 (294)
+|+.+.+=
T Consensus 132 ~gv~l~~E 139 (272)
T 2q02_A 132 YDIQGLVE 139 (272)
T ss_dssp TTCEEEEC
T ss_pred cCCEEEEE
Confidence 99987653
No 38
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=51.51 E-value=20 Score=30.32 Aligned_cols=63 Identities=10% Similarity=-0.014 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+++.++.|.+-|++.|+++ ..++.. .......+.+ -..++.+.+.|+++|+.+.+=
T Consensus 79 ~~~~~~~~~~~i~~A~~lG~~~v~~~--~~p~~~-~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 141 (281)
T 3u0h_A 79 FLRELSLLPDRARLCARLGARSVTAF--LWPSMD-EEPVRYISQL------ARRIRQVAVELLPLGMRVGLE 141 (281)
T ss_dssp HHHHHHTHHHHHHHHHHTTCCEEEEE--CCSEES-SCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEe--ecCCCC-CcchhhHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 45567788899999999999999853 111110 1101111111 136677788889999988764
No 39
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=51.08 E-value=41 Score=29.22 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcE--EEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IVG 166 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~--Iv~ 166 (294)
.+..++.+++.++.|.+.|++.|++|-. +. ......+... -..++.+.+.|+++|+. +.+
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~--~~~~~~~~~~-------~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMM--PT--ITTHDEAKLV-------CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSC--CC--CCSHHHHHHH-------HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCC--CC--CCCHHHHHHH-------HHHHHHHHHHHHHCCCcceEEE
Confidence 3667888999999999999999999732 11 1111111111 13677888899999998 654
No 40
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=50.39 E-value=31 Score=31.75 Aligned_cols=66 Identities=6% Similarity=-0.002 Sum_probs=41.3
Q ss_pred cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcE--EE
Q 022660 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IV 165 (294)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~--Iv 165 (294)
+...|.+.+.+.++...+.|..++||||..=+--...+-...... ......+.++.+|.+.++. |+
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~-----Fk~gs~~~~~~LA~ksg~P~hIv 271 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAP-----FDASSVDNMRRLIQHSDVPGHLF 271 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCC-----CCHHHHHHHHHHHHTSSSCEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcccccc-----ccchhhhHHHHHHHHcCCCceEE
Confidence 345677777777777777799999999985332110000000111 1234788899999999887 65
No 41
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=49.01 E-value=39 Score=28.32 Aligned_cols=61 Identities=13% Similarity=0.129 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc--cchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~--~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|++. +|+..... ....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 142 (278)
T 1i60_A 80 NEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS------VDVLTELSDIAEPYGVKIALE 142 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHhcCCEEEEE
Confidence 4568889999999999999998872 23222111 1111111 136677888889999987653
No 42
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=46.82 E-value=46 Score=28.56 Aligned_cols=57 Identities=11% Similarity=-0.182 Sum_probs=37.7
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCC-CCCCCHHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAF-NMTTGPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~-~~~~~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
.+++|-|.. +++..+..++|+|+|+. |--| ........+..-...++++|++.+.++
T Consensus 37 ~I~~~lD~t-~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTAS-QALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEECC-HHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHhCCCCEEEECCchhccCCCccccchHHHHHHHHHHCCCEEEEe
Confidence 566777774 57788888899999996 6655 322111112233457788999998875
No 43
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=46.09 E-value=46 Score=26.31 Aligned_cols=61 Identities=13% Similarity=0.218 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
.+...+.+.++++.+.+.++++|++--...+. .....+.+.+. .+.+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~---~~~~~~~~~~~------~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEP---NRSDPMRKTVD------AYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCC---CTTSHHHHHHH------HHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCC---CcchHHHHHHH------HHHHHHHHHHHHcCCeEE
Confidence 55667777888888877799999983111111 11111222222 467788999999987654
No 44
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=45.64 E-value=63 Score=27.42 Aligned_cols=68 Identities=9% Similarity=0.008 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCC--CCCCCCCCCcc---c--hhhhhccCCCCcHHHHHHHHHHHhcCcEEEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEI--WNSPYSHDSFP---V--YAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~--~l~gy~~~~~~---~--~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~ 166 (294)
.+..++.+++.++.|.+.|++.|+++.. +..|.....+. . ..+.++. .-..++.+.+.|+++|+.+.+
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDE---VCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHH---HHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHH---HHHHHHHHHHHHHHcCCEEEE
Confidence 3556788899999999999999988642 11122111000 0 1111110 013677788888999998765
No 45
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=44.54 E-value=14 Score=30.30 Aligned_cols=40 Identities=10% Similarity=0.248 Sum_probs=23.3
Q ss_pred ceEEEEEecccc----ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCC
Q 022660 82 KFKVGLCQLSVT----ADKERNIAHARRAIEEAAEKGAKLILLPEIW 124 (294)
Q Consensus 82 ~~rValvQ~~v~----~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~ 124 (294)
.+++-++..|+. .+.....+.+.+.| .+.++|+|+|.|..
T Consensus 11 ~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i---~~~~pDIi~LQEv~ 54 (256)
T 4fva_A 11 GFEVSVMSWNIDGLDGRSLLTRMKAVAHIV---KNVNPDILFLQEVV 54 (256)
T ss_dssp TCEEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEEC
T ss_pred CCEEEEEEEecCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEecC
Confidence 344445555554 23333344444444 45689999999973
No 46
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=42.05 E-value=59 Score=27.74 Aligned_cols=57 Identities=4% Similarity=-0.106 Sum_probs=38.5
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCCCCHHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTTGPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
.+++|-|.. +++.++..++|||+|+. |--|+...-...+..-...++++|++.+.++
T Consensus 38 ~I~~alD~t-~~vi~eAi~~~adlIitHHp~~f~~~~~~~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 38 KVGAAVDAG-EAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp CEEEEEECS-HHHHHHHHHTTCSEEEEEECSCSSCCCCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcCcCcccccccHHHHHHHHHHHCCCeEEEe
Confidence 366677774 67778888999999996 6655221112334444467888999998875
No 47
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=40.75 E-value=68 Score=29.17 Aligned_cols=54 Identities=17% Similarity=0.249 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEee
Q 022660 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGS 168 (294)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs 168 (294)
+.+.+++...+.++..++.|.+.|| |....|+.. -...+.+++++.|+.||.++
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIV--d~T~~g~GR------------------d~~~l~~is~~tGv~IV~~T 130 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVV--DPTPNDCGR------------------NPAFLRRVAEETGLNIICAT 130 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEE--ECCCTTTTC------------------CHHHHHHHHHHHCCEEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEE--ECCCCCcCc------------------CHHHHHHHHHHcCCCEEEeC
Confidence 3456677777888888899999999 776666432 23567889999999998774
No 48
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=40.74 E-value=79 Score=27.16 Aligned_cols=66 Identities=12% Similarity=-0.060 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCC---CccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD---SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~---~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+++.++.|.+.|++.|+.|=....|.... ......+.+ -..++.+.+.|+++|+.+.+=
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG------VEGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 356788999999999999999998652111122111 111111111 136677888889999987653
No 49
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=39.92 E-value=44 Score=27.80 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc-chhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~-~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+..++.+.+.++.|.+-|++.|++. +|+.....+ ...+.++. .-..++.+.+.|+++|+.+.+=
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~----~g~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~gv~l~lE 136 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFH----SGIPHGRTPEEALERALP---LAEALGLVVRRARTLGVRLLLE 136 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEE----CCCCTTCCHHHHHHTHHH---HHHHTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEC----CCCCcccccccHHHHHHH---HHHHHHHHHHHHhhcCCEEEEc
Confidence 45668889999999999999988764 232222211 11111110 0135567778888899987653
No 50
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=39.90 E-value=87 Score=25.81 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
+...|++++ ++.+.+.|+.+|+.- .+ +...+.. ..+. .....+.+.++++|+++++.++
T Consensus 109 ~~~~~l~~~---i~~~~~~g~~vil~t---p~--p~~~~~~--~~~~--~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 109 TFPAYLENA---AKLFTAKGAKVILSS---QT--PNNPWET--GTFV--NSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp BHHHHHHHH---HHHHHHTTCEEEEEC---CC--CCCTTTT--SSCC--CCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHH---HHHHHHCCCEEEEEC---CC--CccccCC--Cccc--cchHHHHHHHHHHHHHhCCeEE
Confidence 455555554 555566788877752 11 1111110 0010 1124688899999999998775
No 51
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=39.73 E-value=1.1e+02 Score=24.50 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=37.0
Q ss_pred cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC-CCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH-DSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~-~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
+.+...+.+..+++.+.+.++.+|+.-=.-...+.. .......+.+. .+-+.++++|+++++.++
T Consensus 99 ~~~~~~~~l~~ii~~~~~~~~~iil~~~~P~~~~~~~~~~~~~~~~i~------~~n~~i~~~a~~~~v~~i 164 (209)
T 4hf7_A 99 NEDYTFGNIASMAELAKANKIKVILTSVLPAAEFPWRREIKDAPQKIQ------SLNARIEAYAKANKIPFV 164 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCCTTCTTCCCHHHHHH------HHHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhhHHHhccCceEEEEeeeccCcccccccccchhHHHH------HHHHHHHHHHHhcCCeEe
Confidence 455666777778887888899988752111111110 11111122222 356778899999988664
No 52
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=39.12 E-value=1e+02 Score=26.76 Aligned_cols=68 Identities=13% Similarity=0.157 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc---c--------hhhhhccCCCCcHHHHHHHHHHHhcCcEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP---V--------YAEDIDAGGDASPSTAMLSEVARLLKITI 164 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~---~--------~~~~~~~~~~~~~~~~~l~~lA~~~~i~I 164 (294)
.+..++.+++.++.|.+.|++.|+.|=.+..|....... . ..+..+. --..++.+.+.|+++|+.+
T Consensus 104 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l 180 (335)
T 2qw5_A 104 RQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYAN---AQPILDKLGEYAEIKKVKL 180 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHH---HHHHHHHHHHHHHHcCCEE
Confidence 356678899999999999999997653221121111100 0 1111110 0135677888888999987
Q ss_pred EE
Q 022660 165 VG 166 (294)
Q Consensus 165 v~ 166 (294)
.+
T Consensus 181 ~l 182 (335)
T 2qw5_A 181 AI 182 (335)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 53
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=38.42 E-value=1.8e+02 Score=25.76 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=29.5
Q ss_pred ceEEEEEeccc--------cccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 82 KFKVGLCQLSV--------TADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 82 ~~rValvQ~~v--------~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
.+++..++... ..+.+..++.+.+.++.|.+.|+++|++
T Consensus 68 GL~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 68 GLALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp TCEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36776665432 2345677889999999999999999998
No 54
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=38.16 E-value=22 Score=32.95 Aligned_cols=42 Identities=17% Similarity=0.003 Sum_probs=26.6
Q ss_pred HHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 110 AAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 110 A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
...+|||+|+.|=.+.... . . ......++.-|.+++++++.-
T Consensus 246 la~~GAdill~psa~~~~~---~-----~--------~~w~~l~raRAiEn~~~Vv~a 287 (405)
T 2vhh_A 246 FGLNGAEIVFNPSATIGRL---S-----E--------PLWSIEARNAAIANSYFTVPI 287 (405)
T ss_dssp HHHTTCSEEEEEECCBCTT---T-----H--------HHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHcCCCEEEEcccCCCCC---C-----H--------HHHHHHHHHHHHHcCceEEEe
Confidence 4568999999998542210 0 0 013334566788999998754
No 55
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=37.42 E-value=78 Score=26.54 Aligned_cols=18 Identities=22% Similarity=0.174 Sum_probs=13.9
Q ss_pred HHHHCCCcEEEcCCCCCC
Q 022660 109 EAAEKGAKLILLPEIWNS 126 (294)
Q Consensus 109 ~A~~~gadLVVfPE~~l~ 126 (294)
...+.++|||+|.|....
T Consensus 50 ~i~~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 50 WVKEEAPDILCLQETKCS 67 (285)
T ss_dssp HHHHHCCSEEEEECCCCC
T ss_pred HHHhcCCCEEEEEEeecc
Confidence 334568999999999654
No 56
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=35.81 E-value=72 Score=29.56 Aligned_cols=57 Identities=18% Similarity=0.049 Sum_probs=41.0
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCC--CCHHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMT--TGPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~--~~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
++++|-|.. +++..+...+|||+|+. |--|... .....+..-...++++|++.|.++
T Consensus 66 ~Vl~alD~t-~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDVT-EEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSCC-HHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHHHHHHHCCCeEEEe
Confidence 678888884 78888888999999996 5555321 112344444567899999999875
No 57
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=35.64 E-value=1.4e+02 Score=26.27 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc-cchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF-PVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~-~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
..|++.+.+.++.+.+.|.+++=+.=-.++-|+.... ....+.. ....+.+.++++++++.+++.
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~------~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAY------EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHH------HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCC------HHHHHHHHHHHHHcCCeEEEe
Confidence 6899999999999999998888764333333332211 0111111 146778999999999976654
No 58
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=35.57 E-value=1.6e+02 Score=27.18 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHCCCcEEEc----CCCCCCCCC--CCC---cc-chhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 98 RNIAHARRAIEEAAEKGAKLILL----PEIWNSPYS--HDS---FP-VYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 98 ~n~~~i~~~i~~A~~~gadLVVf----PE~~l~gy~--~~~---~~-~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
..++...++++.|++.|||.|=| |+..++.+. +.. +. .+.+.........+.+..|.+.|++.|+.++.-
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST 120 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc
Confidence 34778899999999999999988 444334433 110 00 010222222234568899999999999988754
No 59
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=33.92 E-value=86 Score=22.98 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCcE-EEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 150 TAMLSEVARLLKIT-IVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 150 ~~~l~~lA~~~~i~-Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
++.+.+-+++.|+. ++.+ +.......+ +++.||+|..+..+
T Consensus 77 vd~~~~~l~~~G~~~~~~~--p~~~~~G~~--~~~~DPdGn~iel~ 118 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILD--PTDMPDGKK--AIVLDPDGHSIELC 118 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEE--EEECC-CEE--EEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCceeccC--ceeCCCccE--EEEECCCCCEEEEE
Confidence 45566666778888 6554 333333333 88999999987653
No 60
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=33.82 E-value=1.1e+02 Score=21.70 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=28.6
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 150 ~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
++.+.+.+++.|+.++.+..........+..+++.||+|..+..+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~ 128 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVS 128 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEE
Confidence 455555666778877665222223335556788999999887543
No 61
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=33.68 E-value=1.4e+02 Score=25.06 Aligned_cols=63 Identities=13% Similarity=-0.075 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCC--C---CCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS--H---DSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~--~---~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|+.+ ..+|+. . .+.....+.+ -..++.+.+.|+++|+.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGA--LYSYWPIDYTKTIDKKGDWERS------VESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEES--TTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeecc--ccCCCCCcCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 4667889999999999999999742 112221 0 1111111111 136777888889999987653
No 62
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=32.94 E-value=1.4e+02 Score=27.31 Aligned_cols=42 Identities=10% Similarity=0.230 Sum_probs=31.7
Q ss_pred ceEEEEEecc-c-------cccHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 022660 82 KFKVGLCQLS-V-------TADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (294)
Q Consensus 82 ~~rValvQ~~-v-------~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~ 123 (294)
.+++.+++.. + ..+.+..++.+.+.|+.|++.|+++|+...+
T Consensus 77 GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 77 GLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp TCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 4778777532 2 1456788999999999999999999996433
No 63
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=32.18 E-value=1.3e+02 Score=27.23 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc---cchhhhhccCCCCcHHHHHHHHHHHhcC--cEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF---PVYAEDIDAGGDASPSTAMLSEVARLLK--ITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~---~~~~~~~~~~~~~~~~~~~l~~lA~~~~--i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|++- +|...... ....+..+. .-..++.+.+.|+++| +.|.+=
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~----~G~~g~~~~~~~~~~~~~~~---~~e~L~~l~~~A~~~G~~v~l~lE 180 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMW----GGREGSEYDGSKDLAAALDR---MREGVDTAAGYIKDKGYNLRIALE 180 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEC----CTTCEESSGGGCCHHHHHHH---HHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEC----CCCCccccccccCHHHHHHH---HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 5678889999999999999988762 22210000 011111110 0136667778888999 877653
No 64
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=32.13 E-value=1.1e+02 Score=26.26 Aligned_cols=57 Identities=14% Similarity=0.045 Sum_probs=38.4
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCCC--CHHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTT--GPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~~--~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
.+++|-|.. +++..+..++|||+|+. |--|.... ....+..-...++++|++.+.++
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHHHHHHHCCCeEEEe
Confidence 567788874 77778888999999997 55442211 11223333457788999998875
No 65
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=29.64 E-value=1.2e+02 Score=22.46 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=28.3
Q ss_pred HHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEe
Q 022660 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (294)
Q Consensus 150 ~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~ 195 (294)
++.+.+.+++.|+.++.+......+......+++.||+|..+..+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~ 142 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQ 142 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEe
Confidence 4455555567788776652222223444567788999999876543
No 66
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=28.77 E-value=49 Score=28.73 Aligned_cols=67 Identities=16% Similarity=-0.015 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcE-EEE
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT-IVG 166 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~-Iv~ 166 (294)
+..++.+++.++.|.+-|++.|+.|=...+.-.........+..+. .-..++.+.+.|+++|+. +.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAI---ARDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHH---HHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHH---HHHHHHHHHHHHHhcCCeEEEE
Confidence 4567889999999999999999976432110000010011111110 013667788888999998 754
No 67
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=28.71 E-value=1.8e+02 Score=25.93 Aligned_cols=62 Identities=15% Similarity=0.046 Sum_probs=46.0
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.-|+.++-+|=..-+++.+.+...|++=|+.-+. +...-+..|.. .-.+|.+.|+.||.+.+
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~Gn~p~~~~~-~l~~a~~~Gi~VV~~Sr 278 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGM-GAGSVSVRGIA-GMRKALEKGVVVMRSTR 278 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TTTBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CCCCCCHHHHH-HHHHHHHCCceEEEECC
Confidence 4699999999999999999998889998887554 22212233333 35677899999998875
No 68
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=28.25 E-value=92 Score=28.51 Aligned_cols=56 Identities=14% Similarity=0.039 Sum_probs=39.7
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCC--CCHHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMT--TGPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~--~~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
++++|-|.. +++..+...+|||+|+. |--|... .....+ .-...++++|++.+.++
T Consensus 42 ~Vl~alD~t-~~Vv~eAi~~~adlIItHHPlif~~~k~i~~~~~-~r~i~~li~~~Ialya~ 101 (370)
T 2nyd_A 42 GVLTALDCT-LEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY-GLIIRKLIQHDINLIAM 101 (370)
T ss_dssp CEEEESSCC-HHHHHHHHHHTCCEEEESSCSSCSCCSCCCSSTH-HHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcccCCccccCcCCH-HHHHHHHHHCCCeEEEe
Confidence 577888884 78888888999999996 5544321 112334 44467899999999875
No 69
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=28.06 E-value=1.5e+02 Score=22.98 Aligned_cols=69 Identities=12% Similarity=0.194 Sum_probs=41.1
Q ss_pred EEEEEecccc-----ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHH
Q 022660 84 KVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (294)
Q Consensus 84 rValvQ~~v~-----~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (294)
.+.+++.... .+.+...+.+.++++.+.+.++++|+.--...+.+ . . ... ..+.+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p~~~--~--~---~~~------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANY--G--R---RYN------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCGGG--C--H---HHH------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCCcch--h--H---HHH------HHHHHHHHHHHH
Confidence 4556665432 24566677777777777777899887632111100 0 0 111 136678899999
Q ss_pred hcCcEEE
Q 022660 159 LLKITIV 165 (294)
Q Consensus 159 ~~~i~Iv 165 (294)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9988665
No 70
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=27.92 E-value=1.9e+02 Score=25.86 Aligned_cols=62 Identities=10% Similarity=-0.092 Sum_probs=46.1
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
..|+.++-+|=..-+++.+.+...|++=|+.-+. +...-+..|.. .-.+|.+.|+.||.+.+
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~Gn~p~~~~~-~l~~a~~~Gi~VV~~Sr 279 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGV-GNGNVSAGFLK-AMQEASQMGVVIVRSSR 279 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TTTBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CCCCCCHHHHH-HHHHHHHCCCEEEEECC
Confidence 4699999999999999999998889998887654 22212233333 35577899999998875
No 71
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=27.72 E-value=97 Score=25.74 Aligned_cols=59 Identities=10% Similarity=0.070 Sum_probs=40.7
Q ss_pred ceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcC
Q 022660 82 KFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLK 161 (294)
Q Consensus 82 ~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~ 161 (294)
.++|..+...... ..+.+++.++.|..-|++.|+++- |. ..++.+.+.|+++|
T Consensus 76 gl~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~~----~~-------------------~~~~~l~~~a~~~g 128 (262)
T 3p6l_A 76 GIKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCEP----AL-------------------SDWDLVEKLSKQYN 128 (262)
T ss_dssp TCEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEECC----CG-------------------GGHHHHHHHHHHHT
T ss_pred CCeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEecC----CH-------------------HHHHHHHHHHHHhC
Confidence 3566666554322 234577888889999999999862 20 24467899999999
Q ss_pred cEEEEe
Q 022660 162 ITIVGG 167 (294)
Q Consensus 162 i~Iv~G 167 (294)
+.+.+=
T Consensus 129 v~l~~E 134 (262)
T 3p6l_A 129 IKISVH 134 (262)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 987653
No 72
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=27.53 E-value=1.9e+02 Score=25.74 Aligned_cols=62 Identities=15% Similarity=-0.062 Sum_probs=45.9
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.-|+.++-+|=..-+++.+.+...|++=|+.-+. +...-+..|.. .-.+|.+.|+.||.+.+
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~-G~Gn~p~~~~~-~l~~a~~~gi~VV~~Sr 276 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGM-GNGNPFPLTQN-ALEKAAKSGVVVARSSR 276 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEB-TTTBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CCCCCCHHHHH-HHHHHHHCCCEEEEECC
Confidence 4699999999999999999998889998887654 22212233333 35567899999998875
No 73
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=27.23 E-value=58 Score=31.96 Aligned_cols=70 Identities=21% Similarity=0.280 Sum_probs=39.3
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeee-CCeeEE-EEEEEc
Q 022660 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GDRLYN-TCCVFG 185 (294)
Q Consensus 108 ~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~-~~~~yN-sa~vi~ 185 (294)
+.++.+|||+|+-|=.+.. .... . ......++.-|.+++++++.-+....+ ++..|. .+++ .
T Consensus 176 r~la~~GAdii~~psas~~--~~gk---~----------~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I-~ 239 (634)
T 3ilv_A 176 IRHYEKGATLVLNPSASHF--AFGK---S----------AIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLI-A 239 (634)
T ss_dssp --CGGGTCSEEEEEECCBC--CTTH---H----------HHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEE-E
T ss_pred HHHHHCCCcEEEEecCCcc--ccCc---H----------HHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEE-E
Confidence 3446779999999865321 1110 0 123455677889999998754322222 233443 2344 4
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
++|+++..
T Consensus 240 p~G~vla~ 247 (634)
T 3ilv_A 240 HKGKLIQR 247 (634)
T ss_dssp ETTEEEEE
T ss_pred cCCeEEEE
Confidence 89998754
No 74
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=27.17 E-value=71 Score=26.89 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCC---CCC-CccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPY---SHD-SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy---~~~-~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|+.|=....|. ... ......+.+ -..++.+.+.|+++|+.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 84 DAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA------IESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH------HHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 45678899999999999999998541100122 111 111111111 135667788889999987653
No 75
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=26.64 E-value=2e+02 Score=25.54 Aligned_cols=62 Identities=15% Similarity=-0.083 Sum_probs=45.9
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.-|+.++-+|=..-+++.+.+...|++=|+.-+. +...-+..|.. .-.+|.+.|+.||.+.+
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~-G~Gn~p~~~~~-~l~~a~~~gi~VV~~Sr 272 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGV-GNGNLYKSVFD-TLATAAKTGTAVVRSSR 272 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEB-TTTBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeE-CCCCCCHHHHH-HHHHHHHCCCEEEEECC
Confidence 4699999999999999999998889998887654 22212233333 35577899999998875
No 76
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=26.63 E-value=1.5e+02 Score=26.82 Aligned_cols=63 Identities=10% Similarity=-0.048 Sum_probs=45.8
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCC-CCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAF-NMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~-~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.-|+.++-+|=..-+++.+.+...|++=|+.-+.- +..+ .+.+..-.-.+|++.|+.||.+.+
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p-~~~~~~~~l~~a~~~Gi~VV~~Sr 292 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAP-QNKAFLQELQEASDRGIVVVNLTQ 292 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTSSSCSEEEEEEBTTTBCC-CCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecCCCCCCC-CcHHHHHHHHHHHHCCCEEEEEcC
Confidence 46999999999999999998888899988875542 1121 112333335678899999998875
No 77
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=26.22 E-value=1e+02 Score=26.56 Aligned_cols=68 Identities=9% Similarity=-0.015 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCC-----CCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSP-----YSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLVVfPE~~l~g-----y~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+..++.+++.++.|.+.|++.|++.=....+ +.........+.++. .-..++.+.+.|+++|+.+.+=
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l~lE 179 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQD---FADRWNPILDVFDAEGVRFAHE 179 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHH---HHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHH---HHHHHHHHHHHHHHcCCEEEEE
Confidence 4567888999999999999998874211100 000000001111110 0136677888889999987653
No 78
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=25.99 E-value=1.7e+02 Score=26.44 Aligned_cols=85 Identities=7% Similarity=-0.035 Sum_probs=50.7
Q ss_pred ceEEEEEecc---cc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHH
Q 022660 82 KFKVGLCQLS---VT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (294)
Q Consensus 82 ~~rValvQ~~---v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (294)
+++-..+|.- ++ +| ++.++..+.++.+++.|++-||+-....-|+..-+- .+...-.......+.++.+.+.|
T Consensus 33 ~itgtfld~~~~d~~~qn--Wd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS-~~~~~~~~~~p~~Dlv~~~l~aa 109 (340)
T 4h41_A 33 KITGTFLDEISHDIPHQN--WGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPS-PYLLKKGCYMPSVDLVDMYLRLA 109 (340)
T ss_dssp CEEEEEECTTCSSSCCCC--CCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCC-HHHHHTTCCCCSBCHHHHHHHHH
T ss_pred cceEEEehhhcCCCcccC--CCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCc-ccccccCccCCcccHHHHHHHHH
Confidence 3444556652 22 33 445666777888899999999986654444332110 11000000011235899999999
Q ss_pred HhcCcEEEEeee
Q 022660 158 RLLKITIVGGSI 169 (294)
Q Consensus 158 ~~~~i~Iv~Gs~ 169 (294)
+++|+.+.+|.+
T Consensus 110 ~k~Gmkv~~Gly 121 (340)
T 4h41_A 110 EKYNMKFYFGLY 121 (340)
T ss_dssp HHTTCEEEEECC
T ss_pred HHhCCeEEEecC
Confidence 999999988843
No 79
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=25.72 E-value=54 Score=27.02 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=22.7
Q ss_pred EEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCC
Q 022660 85 VGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNS 126 (294)
Q Consensus 85 ValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~ 126 (294)
+-++|.|+..... ..+ .+++...+.++|+|++.|....
T Consensus 20 lri~s~Nv~~~~~-~~~---~l~~~i~~~~~DIv~lQE~~~~ 57 (245)
T 1wdu_A 20 YRVLQANLQRKKL-ATA---ELAIEAATRKAAIALIQEPYVG 57 (245)
T ss_dssp EEEEEEECTTCHH-HHH---HHHHHHHHHTCSEEEEESCCC-
T ss_pred eeeeeeeccccHH-HHH---HHHHHHhhcCCCEEEEEccccc
Confidence 3456667664322 123 3344445678999999998643
No 80
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=25.17 E-value=44 Score=30.11 Aligned_cols=43 Identities=7% Similarity=0.059 Sum_probs=23.8
Q ss_pred CCCCceEEEEEeccc-c-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 022660 78 PPVAKFKVGLCQLSV-T-ADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (294)
Q Consensus 78 ~~~~~~rValvQ~~v-~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~ 123 (294)
++...|||.-.-.+- . .+.....+.+.+.| .+.++|||+|-|.
T Consensus 115 ~~~~~lkVlSWNI~Gl~~~~~~~R~~~I~~~I---~~~~PDIV~LQEv 159 (362)
T 4gew_A 115 LKGFEVSVMSWNIDGLDGRSLLTRMKAVAHIV---KNVNPDILFLQEV 159 (362)
T ss_dssp TTTCEEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEE
T ss_pred CCCCeEEEEEEEeCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEcC
Confidence 334455655544431 1 22333344444444 5668999999996
No 81
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=24.98 E-value=1.4e+02 Score=23.95 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=41.9
Q ss_pred eEEEEEecccc---------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc------------cchhhhhc
Q 022660 83 FKVGLCQLSVT---------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF------------PVYAEDID 141 (294)
Q Consensus 83 ~rValvQ~~v~---------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~------------~~~~~~~~ 141 (294)
-.+.+++.... .+.+...+.+.++++.+.+.++++|++-- +......+ ....+.+
T Consensus 73 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (240)
T 3mil_A 73 IVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIGP---GLVDREKWEKEKSEEIALGYFRTNENF- 148 (240)
T ss_dssp EEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEECC---CCCCHHHHHHHCHHHHHTTCCCCHHHH-
T ss_pred CCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEcC---CCCCchhhhhhccccccccccchHHHH-
Confidence 35666665431 14556666777777777788998888641 11110000 0000111
Q ss_pred cCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 142 AGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 142 ~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
..+.+.++++|+++++.++
T Consensus 149 -----~~~n~~~~~~a~~~~v~~v 167 (240)
T 3mil_A 149 -----AIYSDALAKLANEEKVPFV 167 (240)
T ss_dssp -----HHHHHHHHHHHHHTTCCEE
T ss_pred -----HHHHHHHHHHHHHhCCeEE
Confidence 1466788899999988765
No 82
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=24.81 E-value=2.8e+02 Score=26.14 Aligned_cols=61 Identities=11% Similarity=0.025 Sum_probs=40.5
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.++|..+.....+-+..+.+.+.|+|+|.+-++.+. ....+..+...|..--++.|+..|+
T Consensus 220 L~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~--~~~~~~~i~~ir~~~p~~~Vi~g~v 280 (496)
T 4fxs_A 220 LRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH--SEGVLQRIRETRAAYPHLEIIGGNV 280 (496)
T ss_dssp BCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTT--SHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred eeeeeeeccccchHHHHHHHHhccCceEEecccccc--chHHHHHHHHHHHHCCCceEEEccc
Confidence 467788888778888999999999999998776432 2333344444444322667766543
No 83
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=24.00 E-value=1.1e+02 Score=29.06 Aligned_cols=47 Identities=13% Similarity=0.153 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 100 IAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 100 ~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
.+...+.++++.+.|+.+||+.|.+ . ....+++.+.|+++++.|++.
T Consensus 46 a~~v~~~v~e~~~~Gv~~viis~Gf----~-----------------~~~~~~l~~~A~~~g~rliGP 92 (480)
T 3dmy_A 46 GEYAAELANQALDRNLNVMMFSDNV----T-----------------LEDEIQLKTRAREKGLLVMGP 92 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCCC----C-----------------HHHHHHHHHHHHHTTCCEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCC----C-----------------HHHHHHHHHHHHHcCCEEEec
Confidence 4567788888899999988876553 2 024567899999999988764
No 84
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=23.42 E-value=59 Score=24.66 Aligned_cols=43 Identities=12% Similarity=-0.036 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEE
Q 022660 100 IAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (294)
Q Consensus 100 ~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~ 166 (294)
-+...+.++++.+.|+.-|+|- +|+. .+++.+.|+++++.++.
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~----~G~~--------------------~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFN----PGTE--------------------NEELEEILSENGIEPVI 110 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEEC----TTCC--------------------CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEC----CCCC--------------------hHHHHHHHHHcCCeEEC
Confidence 3456667777778888876653 3321 14688999999999884
No 85
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=23.22 E-value=81 Score=27.97 Aligned_cols=24 Identities=8% Similarity=0.195 Sum_probs=19.6
Q ss_pred eeEEEEEEEccCCcEEEEEeeccc
Q 022660 176 RLYNTCCVFGSDGKLIAKHRKIHL 199 (294)
Q Consensus 176 ~~yNsa~vi~~~G~il~~y~K~~L 199 (294)
..+-+.++||++|.+...|+|+.+
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCS
T ss_pred cCccEEEEECCCCEEEEEEeCCCc
Confidence 344578999999999989998764
No 86
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.13 E-value=1.4e+02 Score=26.06 Aligned_cols=47 Identities=21% Similarity=0.326 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHCCCc-EEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 100 IAHARRAIEEAAEKGAK-LILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 100 ~~~i~~~i~~A~~~gad-LVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
-+...+.+++|.+.|+. +|++.+. +. ....+.+.+.|+++++.+++.
T Consensus 80 ~~~~~~~v~ea~~~Gi~~vVi~t~G----~~-----------------~~~~~~l~~~A~~~gi~viGP 127 (294)
T 2yv1_A 80 APFAKDAVFEAIDAGIELIVVITEH----IP-----------------VHDTMEFVNYAEDVGVKIIGP 127 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSC----CC-----------------HHHHHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCC----CC-----------------HHHHHHHHHHHHHcCCEEEcC
Confidence 34567788888899999 5655553 21 123567899999999977643
No 87
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=23.02 E-value=1.9e+02 Score=21.34 Aligned_cols=45 Identities=13% Similarity=0.171 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEE
Q 022660 149 STAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAK 193 (294)
Q Consensus 149 ~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~ 193 (294)
-++.+.+.+++.|+.+..+............++++.||+|..+..
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl 144 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEV 144 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEE
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEE
Confidence 345555566677887765522212233444567889999987643
No 88
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=22.96 E-value=2.5e+02 Score=21.29 Aligned_cols=69 Identities=12% Similarity=0.140 Sum_probs=41.3
Q ss_pred EEEEEecccc-----ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHH
Q 022660 84 KVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (294)
Q Consensus 84 rValvQ~~v~-----~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (294)
.+.+++.... .+.+...+.+.++++.+.+.++++|++-=...+.+. ..+ . ..+.+.++++|+
T Consensus 68 d~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~~~~p~~~~----~~~---~------~~~~~~~~~~a~ 134 (185)
T 3hp4_A 68 THVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALMEIYIPPNYG----PRY---S------KMFTSSFTQISE 134 (185)
T ss_dssp SEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSTTC----HHH---H------HHHHHHHHHHHH
T ss_pred CEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeCCCCCccc----HHH---H------HHHHHHHHHHHH
Confidence 4556665431 345666677777777777889998876211111110 111 1 146778899999
Q ss_pred hcCcEEE
Q 022660 159 LLKITIV 165 (294)
Q Consensus 159 ~~~i~Iv 165 (294)
++++.++
T Consensus 135 ~~~~~~v 141 (185)
T 3hp4_A 135 DTNAHLM 141 (185)
T ss_dssp HHCCEEE
T ss_pred HcCCEEE
Confidence 9988765
No 89
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=22.68 E-value=2.2e+02 Score=24.45 Aligned_cols=74 Identities=20% Similarity=0.166 Sum_probs=42.4
Q ss_pred HHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEE
Q 022660 105 RAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVF 184 (294)
Q Consensus 105 ~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi 184 (294)
-.+..|...++++++|=|-.. |. |. ... ..+.+.|.++.++.+.++++-+.....-..+....+++
T Consensus 152 v~iAraL~~~P~lLlLDEPts-~L---D~--~~~--------~~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~~drv~~l 217 (275)
T 3gfo_A 152 VAIAGVLVMEPKVLILDEPTA-GL---DP--MGV--------SEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVM 217 (275)
T ss_dssp HHHHHHHTTCCSEEEEECTTT-TC---CH--HHH--------HHHHHHHHHHHHHHCCEEEEEESCCSSGGGGCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEECccc-cC---CH--HHH--------HHHHHHHHHHHhhCCCEEEEEecCHHHHHHhCCEEEEE
Confidence 344556677899999988642 21 10 000 13667788887444777766444322223445566667
Q ss_pred ccCCcEEEE
Q 022660 185 GSDGKLIAK 193 (294)
Q Consensus 185 ~~~G~il~~ 193 (294)
. +|+++..
T Consensus 218 ~-~G~i~~~ 225 (275)
T 3gfo_A 218 K-EGRVILQ 225 (275)
T ss_dssp E-TTEEEEE
T ss_pred E-CCEEEEE
Confidence 4 7887643
No 90
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=22.59 E-value=53 Score=28.26 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=23.8
Q ss_pred CCCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 79 PVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 79 ~~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
.++..||+++ .|.-.|...+++.++.+...++|+||+
T Consensus 8 ~~~~~~i~~i-----SDiHg~~~~l~~vl~~~~~~~~D~ii~ 44 (270)
T 3qfm_A 8 HMDMTKIALL-----SDIHGNTTALEAVLADARQLGVDEYWL 44 (270)
T ss_dssp ---CEEEEEE-----CCCTTCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccEEEEE-----ecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 3456788877 344445666777777777788987776
No 91
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=22.10 E-value=80 Score=27.96 Aligned_cols=52 Identities=17% Similarity=0.329 Sum_probs=30.8
Q ss_pred HHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhc-CcEEE
Q 022660 105 RAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLL-KITIV 165 (294)
Q Consensus 105 ~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~-~i~Iv 165 (294)
++++...+.|+|.|.+.+.+-+..... .+.+.. -++.+.+.+..++. ++.++
T Consensus 183 ~~~~~~~~aGad~i~i~d~~~~~lsp~---~f~ef~------~p~~k~i~~~i~~~~g~~~i 235 (338)
T 2eja_A 183 AYLKEQIKAGADVVQIFDSWVNNLSLE---DYGEYV------YPYVNYLISELKDFSDTPVI 235 (338)
T ss_dssp HHHHHHHHTTCSEEEEEETTGGGSCHH---HHHHHT------HHHHHHHHHHHHHHCCCCEE
T ss_pred HHHHHHHHhCCCEEEEecCccccCCHH---HHHHHh------HHHHHHHHHHHhhcCCCCEE
Confidence 344445578999999998764422222 233332 25777777777766 65544
No 92
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=22.08 E-value=1.8e+02 Score=26.02 Aligned_cols=62 Identities=10% Similarity=-0.106 Sum_probs=45.6
Q ss_pred CceEEEeeeccC-cCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDI-RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~-~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.-|+.++-+|-. .-+++.+.+...|++=|+.-+.- ...-+..|. -.-.+|++.|+.||.+.+
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G-~Gn~p~~~~-~~l~~a~~~Gi~VV~~Sr 282 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSG-AGSIHKNQK-DVLKELLKKGLKVVVSSR 282 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBT-TTBCCHHHH-HHHHHHHTTTCEEEEEES
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeEC-CCCCcHHHH-HHHHHHHHCCCEEEEeCC
Confidence 458999999999 99999998888999988876542 111223333 335678899999998865
No 93
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=21.89 E-value=2.3e+02 Score=25.45 Aligned_cols=75 Identities=17% Similarity=0.092 Sum_probs=43.8
Q ss_pred EEEEEecccc-------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHH
Q 022660 84 KVGLCQLSVT-------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (294)
Q Consensus 84 rValvQ~~v~-------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (294)
.+.++++... .+.+...+.++++++.+.+.++.+|+.- ..+ ....+... ..+. .....+.+.++++
T Consensus 232 d~VvI~~G~ND~~~~~~~~~~~~~~~l~~ii~~lr~~~a~vilvt--P~~--~~~~~~~~-~~~~--~~~~~~~~~i~~l 304 (375)
T 2o14_A 232 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILST--PQG--RATDFTSE-GIHS--SVNRWYRASILAL 304 (375)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEEC--CCC--CTTCBCTT-SCBC--CTTSTTHHHHHHH
T ss_pred CEEEEEEEccCCCccCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC--CCC--cccccCcc-cchh--HHHHHHHHHHHHH
Confidence 5667777532 1456667778888888888899988863 111 11101000 0010 1123467788999
Q ss_pred HHhcCcEEE
Q 022660 157 ARLLKITIV 165 (294)
Q Consensus 157 A~~~~i~Iv 165 (294)
|+++++.++
T Consensus 305 A~~~~v~~i 313 (375)
T 2o14_A 305 AEEEKTYLI 313 (375)
T ss_dssp HHHTTCEEE
T ss_pred HHHcCCeEE
Confidence 999998765
No 94
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=21.51 E-value=41 Score=26.76 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=23.8
Q ss_pred CceEEEEEeccc-c-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 022660 81 AKFKVGLCQLSV-T-ADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (294)
Q Consensus 81 ~~~rValvQ~~v-~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~ 123 (294)
++|||.-.-..- . .+.....+.+.+.| .+.++|+|+|.|.
T Consensus 2 ~~l~v~t~Ni~g~~~~~~~~r~~~i~~~i---~~~~pDIi~LQEv 43 (250)
T 4f1h_A 2 SKLSIISWNVDGLDTLNLADRARGLCSYL---ALYTPDVVFLQEL 43 (250)
T ss_dssp CCEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEE
T ss_pred CeEEEEEEEeCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEeC
Confidence 456766554431 1 23444445555554 4568999999996
No 95
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=21.32 E-value=2.6e+02 Score=21.83 Aligned_cols=73 Identities=10% Similarity=0.173 Sum_probs=41.5
Q ss_pred EEEEEecccc-------ccHHHHHHHHHHHHHHHHHCC---------CcEEEcCCCCCCCCCCCCccchh-------hhh
Q 022660 84 KVGLCQLSVT-------ADKERNIAHARRAIEEAAEKG---------AKLILLPEIWNSPYSHDSFPVYA-------EDI 140 (294)
Q Consensus 84 rValvQ~~v~-------~d~~~n~~~i~~~i~~A~~~g---------adLVVfPE~~l~gy~~~~~~~~~-------~~~ 140 (294)
.+.+++.... .+.+...+.+.++++.+.+.+ +++|+. ..+.........+. +.+
T Consensus 85 d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~---~~p~~~~~~~~~~~~~~~~~~~~~ 161 (216)
T 2q0q_A 85 DLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVV---SPPPLAPMPHPWFQLIFEGGEQKT 161 (216)
T ss_dssp SEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEE---ECCCCCCCCSHHHHHHTTTHHHHH
T ss_pred CEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEE---eCCCcCcccCCcchhhhccHHHHH
Confidence 4556666432 245566677777777777777 888887 11211111011111 111
Q ss_pred ccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 141 DAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 141 ~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
..+-+.++++|+++++.++
T Consensus 162 ------~~~n~~~~~~a~~~~v~~i 180 (216)
T 2q0q_A 162 ------TELARVYSALASFMKVPFF 180 (216)
T ss_dssp ------TTHHHHHHHHHHHHTCCEE
T ss_pred ------HHHHHHHHHHHHHcCCcEE
Confidence 1367789999999987664
No 96
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=20.88 E-value=2.8e+02 Score=23.30 Aligned_cols=72 Identities=18% Similarity=0.033 Sum_probs=42.0
Q ss_pred HHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEE
Q 022660 105 RAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVF 184 (294)
Q Consensus 105 ~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi 184 (294)
-.+..|...+++++++=|-.. |. |. ... ....+.|.+++++ +.++++-++....-..+.+..+++
T Consensus 162 v~iAraL~~~p~lllLDEPts-~L---D~-~~~---------~~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l 226 (257)
T 1g6h_A 162 VEIGRALMTNPKMIVMDEPIA-GV---AP-GLA---------HDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVM 226 (257)
T ss_dssp HHHHHHHHTCCSEEEEESTTT-TC---CH-HHH---------HHHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCcc-CC---CH-HHH---------HHHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 345556778999999999642 21 10 000 1366677777665 776666444322223455666667
Q ss_pred ccCCcEEE
Q 022660 185 GSDGKLIA 192 (294)
Q Consensus 185 ~~~G~il~ 192 (294)
. +|+++.
T Consensus 227 ~-~G~i~~ 233 (257)
T 1g6h_A 227 F-NGQIIA 233 (257)
T ss_dssp E-TTEEEE
T ss_pred E-CCEEEE
Confidence 5 787754
No 97
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=20.75 E-value=2.4e+02 Score=20.22 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=28.0
Q ss_pred HHHHHHHHHHh---cCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 149 STAMLSEVARL---LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 149 ~~~~l~~lA~~---~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
-++.+.+-+++ .|+.++.+ +...... ..+++.||+|..+..+
T Consensus 85 dv~~~~~~l~~~~~~G~~~~~~--p~~~~~g--~~~~~~DPdGn~iel~ 129 (132)
T 3sk2_A 85 DVDKLFNEWTKQKSHQIIVIKE--PYTDVFG--RTFLISDPDGHIIRVC 129 (132)
T ss_dssp HHHHHHHHHHHCSSSCCEEEEE--EEEETTE--EEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHhhhcCCCEEeeC--CcccCce--EEEEEECCCCCEEEEE
Confidence 45566666677 89988765 3333333 4578899999987654
No 98
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=20.70 E-value=2.4e+02 Score=20.42 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 149 STAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 149 ~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
-++.+.+.+++.|+.++.+ +...+.. + .+++.||+|..+..+
T Consensus 108 d~~~~~~~l~~~G~~~~~~--~~~~~~g-~-~~~~~DPdG~~iel~ 149 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHG--PVTRPTG-R-GVYFYDPDGFMIEIR 149 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEE--EEEC-CC-E-EEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHCCCccccC--ceecCCc-c-EEEEECCCCCEEEEE
Confidence 3455556666778887765 2222222 2 678899999987654
No 99
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=20.65 E-value=97 Score=26.77 Aligned_cols=46 Identities=2% Similarity=-0.125 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEE
Q 022660 102 HARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVG 166 (294)
Q Consensus 102 ~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~ 166 (294)
.+.+.+..+.+.|.|+|+.-..++.. ....+.|.++|++.+..+.+
T Consensus 72 av~e~~~~iL~aG~dvv~~S~gaLad-------------------~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 72 AVKEYSLQILKNPVNYIIISTSAFAD-------------------EVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp HHHHHHHHHTTSSSEEEECCGGGGGS-------------------HHHHHHHHHHHHTCSCEEEC
T ss_pred HHHHHHHHHHHCCCCEEEcChhhhcC-------------------HHHHHHHHHHHHHCCCeEEe
Confidence 56666777889999999987655431 24678899999999988754
No 100
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=20.35 E-value=3.6e+02 Score=22.06 Aligned_cols=39 Identities=8% Similarity=0.190 Sum_probs=24.8
Q ss_pred CCCCCCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 76 PTPPVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 76 ~~~~~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
+.....+||+++........ .+.+.++.+++.|.|-|=+
T Consensus 11 ~~~~~~~~klg~~~~~~~~~------~~~~~l~~~~~~G~~~vEl 49 (257)
T 3lmz_A 11 APKAVNPFHLGMAGYTFVNF------DLDTTLKTLERLDIHYLCI 49 (257)
T ss_dssp CCCCCCSSEEEECGGGGTTS------CHHHHHHHHHHTTCCEEEE
T ss_pred cccCCCceEEEEEEEeecCC------CHHHHHHHHHHhCCCEEEE
Confidence 33445578999866555431 3566777778888877643
No 101
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=20.32 E-value=2.5e+02 Score=25.09 Aligned_cols=67 Identities=16% Similarity=0.056 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcC--cEEEE
Q 022660 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLK--ITIVG 166 (294)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~--i~Iv~ 166 (294)
.+..++.+.+.++.|.+.|++.|++.=.. .|+....-....+.++. --..++.+.+.|+++| +.+.+
T Consensus 111 r~~~i~~~~~~i~~A~~LGa~~vvv~~g~-~~~~~~~~~~~~~~~~~---~~e~L~~l~~~A~~~G~~v~l~l 179 (386)
T 1muw_A 111 RRYALRKTIRNIDLAVELGAKTYVAWGGR-EGAESGAAKDVRVALDR---MKEAFDLLGEYVTSQGYDIRFAI 179 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCTT-CEESSTTSCCHHHHHHH---HHHHHHHHHHHHHHHTCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECCCC-CcccccccCCHHHHHHH---HHHHHHHHHHHHHhcCCCeEEEE
Confidence 35678889999999999999988763111 11100000011111110 0136677788888888 87765
No 102
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=20.12 E-value=2.2e+02 Score=24.72 Aligned_cols=46 Identities=26% Similarity=0.311 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHCCCc-EEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 101 AHARRAIEEAAEKGAK-LILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 101 ~~i~~~i~~A~~~gad-LVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
+...+.++++.+.|.. +|++.+. +. ....+.+.+.|+++++.+++.
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t~G----~~-----------------~~~~~~l~~~a~~~gi~vigP 121 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLITEG----IP-----------------TLDMVRAVEEIKALGSRLIGG 121 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSC----CC-----------------HHHHHHHHHHHHHHTCEEEES
T ss_pred HHHHHHHHHHHHCCCCEEEEECCC----CC-----------------HHHHHHHHHHHHHcCCEEEeC
Confidence 4567778888899999 5665553 31 123567899999999987654
Done!