Query 022660
Match_columns 294
No_of_seqs 147 out of 1402
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 09:03:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022660.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022660hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j31a_ d.160.1.2 (A:) Hypothe 100.0 6E-39 4.3E-43 286.7 24.0 194 83-292 2-197 (262)
2 d1f89a_ d.160.1.1 (A:) hypothe 100.0 2.2E-39 1.6E-43 291.0 20.9 214 78-292 5-223 (281)
3 d1uf5a_ d.160.1.2 (A:) N-carba 100.0 5.3E-37 3.9E-41 278.9 23.1 212 81-292 2-235 (303)
4 d1emsa2 d.160.1.1 (A:10-280) N 100.0 1.1E-37 7.9E-42 279.2 17.9 209 79-292 2-215 (271)
5 d1uf5a_ d.160.1.2 (A:) N-carba 81.6 3.3 0.00024 34.2 9.2 79 107-192 180-259 (303)
6 d1j31a_ d.160.1.2 (A:) Hypothe 77.8 3 0.00022 33.8 7.5 66 107-192 155-221 (262)
7 d1emsa2 d.160.1.1 (A:10-280) N 76.9 4.5 0.00033 32.7 8.4 70 107-192 169-240 (271)
8 d2q02a1 c.1.15.4 (A:1-271) Put 57.5 16 0.0012 29.0 7.9 73 82-166 63-137 (271)
9 d1s3la_ d.159.1.7 (A:) Putativ 57.0 3 0.00022 31.3 2.8 33 83-120 1-33 (165)
10 d1f89a_ d.160.1.1 (A:) hypothe 51.1 5 0.00037 32.4 3.4 70 107-192 177-248 (281)
11 d1uf3a_ d.159.1.6 (A:) Hypothe 48.5 3.9 0.00028 31.3 2.2 28 94-121 12-39 (228)
12 d1k7ca_ c.23.10.4 (A:) Rhamnog 46.6 29 0.0021 25.9 7.4 60 94-165 108-167 (233)
13 d1agxa_ c.88.1.1 (A:) Glutamin 46.0 15 0.0011 30.9 5.8 62 230-292 216-277 (331)
14 d1nmpa_ c.135.1.1 (A:) Hypothe 44.0 30 0.0022 27.5 7.3 56 233-290 37-96 (247)
15 d2gx8a1 c.135.1.1 (A:4-373) Ni 43.1 24 0.0018 30.2 6.9 58 232-290 38-99 (370)
16 d1su1a_ d.159.1.7 (A:) Phospho 41.0 5.9 0.00043 29.7 2.1 33 83-120 2-34 (184)
17 d1g2912 c.37.1.12 (1:1-240) Ma 39.9 22 0.0016 28.6 5.7 73 106-193 149-221 (240)
18 d1v43a3 c.37.1.12 (A:7-245) Hy 39.5 18 0.0013 29.0 5.1 72 107-193 147-218 (239)
19 d2fywa1 c.135.1.1 (A:1-265) Hy 39.0 36 0.0026 27.4 7.1 58 232-290 37-98 (265)
20 d1oxxk2 c.37.1.12 (K:1-242) Gl 38.5 24 0.0017 28.4 5.7 74 106-194 150-223 (242)
21 d1eepa_ c.1.5.1 (A:) Inosine m 38.3 39 0.0028 28.9 7.5 62 229-292 139-200 (388)
22 d2fzva1 c.23.5.4 (A:1-233) Put 37.6 87 0.0063 24.4 13.4 105 48-171 5-109 (233)
23 d3d31a2 c.37.1.12 (A:1-229) Su 37.2 23 0.0017 28.2 5.4 73 106-193 137-209 (229)
24 d1l2ta_ c.37.1.12 (A:) MJ0796 36.7 26 0.0019 27.9 5.6 73 103-191 152-224 (230)
25 d2o14a2 c.23.10.8 (A:160-367) 36.2 56 0.0041 24.0 7.5 75 84-165 73-154 (208)
26 d1nnwa_ d.159.1.5 (A:) Hypothe 34.6 13 0.00097 28.5 3.4 22 148-169 51-72 (251)
27 d1y81a1 c.2.1.8 (A:6-121) Hypo 34.0 24 0.0017 24.7 4.4 44 100-167 66-109 (116)
28 d2ocda1 c.88.1.1 (A:2-337) Asp 33.9 45 0.0033 27.7 7.1 63 229-292 209-272 (336)
29 d1klla_ d.32.1.2 (A:) Mitomyci 33.9 63 0.0046 21.7 7.1 43 149-194 82-124 (128)
30 d1o7ja_ c.88.1.1 (A:) Asparagi 33.7 53 0.0039 27.1 7.5 61 230-292 216-276 (325)
31 d1mpya2 d.32.1.3 (A:146-307) C 32.9 39 0.0028 24.4 5.8 48 148-197 78-125 (162)
32 d2i7ra1 d.32.1.2 (A:1-115) Hyp 32.7 44 0.0032 22.4 5.8 41 152-195 73-113 (115)
33 d1i60a_ c.1.15.4 (A:) Hypothet 32.4 37 0.0027 26.6 6.1 77 82-166 59-141 (278)
34 d3dhwc1 c.37.1.12 (C:1-240) Me 30.8 28 0.002 27.9 4.8 75 104-193 148-222 (240)
35 d1yzfa1 c.23.10.5 (A:1-195) Li 30.8 53 0.0038 23.9 6.4 60 95-165 87-147 (195)
36 d2awna2 c.37.1.12 (A:4-235) Ma 30.4 27 0.002 27.8 4.7 71 107-192 141-211 (232)
37 d1wp0a1 c.47.1.10 (A:138-297) 29.9 42 0.0031 23.5 5.5 45 151-196 95-142 (160)
38 d2d6fa2 c.88.1.1 (A:84-435) Gl 29.5 71 0.0052 26.7 7.7 62 229-292 218-279 (352)
39 d1wdua_ d.151.1.1 (A:) Endonuc 29.4 21 0.0016 26.6 3.8 37 87-127 5-41 (228)
40 d4pgaa_ c.88.1.1 (A:) Glutamin 29.3 38 0.0028 28.3 5.7 61 230-292 215-275 (330)
41 d2d59a1 c.2.1.8 (A:4-142) Hypo 28.9 30 0.0022 25.0 4.4 44 100-167 84-127 (139)
42 d3ck2a1 d.159.1.7 (A:1-173) Un 26.7 19 0.0014 27.0 2.9 35 80-120 1-35 (173)
43 d2onka1 c.37.1.12 (A:1-240) Mo 26.6 23 0.0017 28.5 3.5 72 107-193 137-208 (240)
44 d1lgta1 d.32.1.3 (A:2-132) 2,3 25.9 21 0.0016 24.9 3.0 47 148-194 70-116 (131)
45 d2csua1 c.2.1.8 (A:1-129) Acet 24.9 85 0.0062 22.0 6.3 51 241-291 76-128 (129)
46 d1wsaa_ c.88.1.1 (A:) Asparagi 24.5 97 0.0071 25.5 7.5 61 230-292 214-274 (328)
47 d1nnsa_ c.88.1.1 (A:) Asparagi 23.7 1E+02 0.0074 25.3 7.5 61 230-292 212-272 (326)
48 d1g6ha_ c.37.1.12 (A:) MJ1267 23.3 1.1E+02 0.008 24.0 7.4 72 106-193 160-231 (254)
49 d3c9ua1 d.79.4.1 (A:1-137) Thi 23.2 73 0.0053 22.7 5.7 35 148-184 99-133 (137)
50 d1ji0a_ c.37.1.12 (A:) Branche 22.9 47 0.0034 26.3 4.8 74 106-195 149-222 (240)
51 d1zq1a2 c.88.1.1 (A:76-438) Gl 22.7 1.1E+02 0.0079 25.6 7.5 62 229-292 229-290 (363)
52 d1vjga_ c.23.10.6 (A:) Hypothe 21.9 1.2E+02 0.0091 21.2 7.1 74 82-165 72-155 (201)
53 d1vpla_ c.37.1.12 (A:) Putativ 21.8 81 0.0059 24.7 6.2 72 106-193 143-214 (238)
54 d1wo8a1 c.24.1.2 (A:1-126) Met 21.4 95 0.0069 21.7 5.9 48 242-289 61-108 (126)
55 d1kw3b1 d.32.1.3 (B:1-132) 2,3 21.3 29 0.0021 24.2 2.9 49 148-196 70-118 (132)
56 d2a40b1 d.151.1.1 (B:1-260) De 20.1 38 0.0027 24.5 3.5 21 103-124 21-41 (260)
No 1
>d1j31a_ d.160.1.2 (A:) Hypothetical protein PH0642 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=6e-39 Score=286.66 Aligned_cols=194 Identities=32% Similarity=0.475 Sum_probs=169.9
Q ss_pred eEEEEEecccc-ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcC
Q 022660 83 FKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLK 161 (294)
Q Consensus 83 ~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~ 161 (294)
||||++|+++. +|++.|++++++++++|+++|+|||||||++++||...+.....+... ....++..+.++++|++++
T Consensus 2 ~ria~~Q~~~~~~d~e~nl~~i~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~~~~~~-~~~~~~~~~~~~~~A~~~~ 80 (262)
T d1j31a_ 2 VKVGYIQMEPKILELDKNYSKAEKLIKEASKEGAKLVVLPELFDTGYNFESREEVFDVAQ-QIPEGETTTFLMELARELG 80 (262)
T ss_dssp EEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSSHHHHHTTCB-CTTTSHHHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCccccCCchhhhhHhhhhhh-hcccCHHHHHHHHhhhccC
Confidence 79999999965 999999999999999999999999999999999998876443332211 1224689999999999999
Q ss_pred cEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCC-CeEEEeCCceEEEeeeccC
Q 022660 162 ITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTDVGRIGIGICYDI 240 (294)
Q Consensus 162 i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~-~~v~~~~~grigi~ICyD~ 240 (294)
+++++| .++++++++||+++++++ |+++..|+|+||++ .|+.+|.+|+. +.+++++++|||++||||.
T Consensus 81 i~i~~g-~~~~~~~~~~n~~~~i~~-g~~~~~y~K~~l~~---------~e~~~~~~G~~~~~v~~~~~~~ig~~IC~D~ 149 (262)
T d1j31a_ 81 LYIVAG-TAEKSGNYLYNSAVVVGP-RGYIGKYRKIHLFY---------REKVFFEPGDLGFKVFDIGFAKVGVMICFDW 149 (262)
T ss_dssp CEEEEE-EEEEETTEEEEEEEEEET-TEEEEEEECSSCCT---------THHHHCCCCCSCSCEEECSSCEEEECCGGGG
T ss_pred ceEEee-eeecccccccccceEEEe-eeEEEEEeeeecCc---------cCceeECCCCCCceEEEeCCceEEEEEehhh
Confidence 999999 568889999999999985 78999999999965 56678999976 7899999999999999999
Q ss_pred cCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 241 RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 241 ~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+|||+++.++.+|||+|++|+++... .|..+.++||+||++||+++|.
T Consensus 150 ~~pe~~~~~~~~ga~lil~p~~~~~~----~~~~~~~~rA~en~~~vv~~n~ 197 (262)
T d1j31a_ 150 FFPESARTLALKGAEIIAHPANLVMP----YAPRAMPIRALENRVYTITADR 197 (262)
T ss_dssp GSHHHHHHHHHTTCSEEEEECCCCSS----CHHHHHHHHHHHHTCEEEEECC
T ss_pred hhhHHHHHHHHhccccccCCcccccc----cchhhhhhhhhcccceEEEEec
Confidence 99999999999999999999987543 4777789999999999999985
No 2
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.2e-39 Score=291.03 Aligned_cols=214 Identities=50% Similarity=0.822 Sum_probs=180.2
Q ss_pred CCCCceEEEEEecccc-ccHHHHHHHHHHHHHHHHHC--CCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHH
Q 022660 78 PPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEK--GAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLS 154 (294)
Q Consensus 78 ~~~~~~rValvQ~~v~-~d~~~n~~~i~~~i~~A~~~--gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~ 154 (294)
.+.++||||++|+++. +|.+.|++++++++++|+++ |+|||||||++++||...++......++ ...+++.++.++
T Consensus 5 ~m~~~~kia~~Q~~~~~~D~~~N~~~~~~~i~~A~~~~~~a~lvv~PE~~l~gy~~~~~~~~~~~~~-~~~~~~~~~~l~ 83 (281)
T d1f89a_ 5 ILSQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVIN-PKEPSTSVQFLS 83 (281)
T ss_dssp SBSSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCC-SSSCCHHHHHHH
T ss_pred hhccCceEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCcccCCCchhHHHHHHhhhc-ccCCCHHHHHHH
Confidence 4567899999999974 89999999999999998654 8999999999999998765543333222 234578999999
Q ss_pred HHHHhcCcEEEEeeeeeee--CCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCCCeEEEeCCceE
Q 022660 155 EVARLLKITIVGGSIPERS--GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRI 232 (294)
Q Consensus 155 ~lA~~~~i~Iv~Gs~~~~~--~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~~~v~~~~~gri 232 (294)
++|++++++|++|++++.+ ++++||++++++++|+++.+|+|++++++..+....+.|..+|..|....+++++++++
T Consensus 84 ~~A~~~~i~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~~~k~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 163 (281)
T d1f89a_ 84 NLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGKF 163 (281)
T ss_dssp HHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEEE
T ss_pred HHhhhcCceeecceeeeeccccCceeeecccccccccccccccccccccccccccccccccceeeeeccccccccccccc
Confidence 9999999999999766544 67899999999999999999999999887766666677888899999999999999999
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
|++||||.++|+.+|.++.+|++++++|++++......+|..++++||.||++||+.+|.
T Consensus 164 g~~iC~d~~~p~~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~ 223 (281)
T d1f89a_ 164 GVGICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSP 223 (281)
T ss_dssp EECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECC
T ss_pred ccccccccccccchhhhhcccccceeEeeccccccccccccchhhhhcccccccceeeee
Confidence 999999999999999999999999999999877666678888899999999999999985
No 3
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase {Agrobacterium sp. [TaxId: 361]}
Probab=100.00 E-value=5.3e-37 Score=278.86 Aligned_cols=212 Identities=22% Similarity=0.258 Sum_probs=167.9
Q ss_pred CceEEEEEeccc-c--ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhh---ccCCCCcHHHHHHH
Q 022660 81 AKFKVGLCQLSV-T--ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDI---DAGGDASPSTAMLS 154 (294)
Q Consensus 81 ~~~rValvQ~~v-~--~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~---~~~~~~~~~~~~l~ 154 (294)
++||||++|+.+ . .+.+.|++++.+++++|+++|+|||||||++++||.+.........+ .....+++.++.+.
T Consensus 2 ~~~~ia~~Q~~Pi~~~~~~~~~l~r~~~li~~A~~~gadlvvfPE~~l~Gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (303)
T d1uf5a_ 2 RQMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLF 81 (303)
T ss_dssp CEEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHH
T ss_pred cEEEEEEEccCCcCCCcCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCCccccccchhHHhhhhhhhcCCHHHHHHH
Confidence 689999999974 2 58899999999999999999999999999999999764322111111 11223567899999
Q ss_pred HHHHhcCcEEEEeeeeee---eCCeeEEEEEEEccCCcEEEEEeecccCCCCC--CCc-cccccccCccCCC-CCeEEEe
Q 022660 155 EVARLLKITIVGGSIPER---SGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDI--PGK-ITFIESKSLTAGE-TPTIVDT 227 (294)
Q Consensus 155 ~lA~~~~i~Iv~Gs~~~~---~~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~--P~~-~~f~E~~~f~~G~-~~~v~~~ 227 (294)
++|++++++|++|+.... .++++||++++++++|+++.+|+|+||++++. |.. ....|..+|.+++ ...+|++
T Consensus 82 ~~A~~~~i~i~~G~~~~~~~~~~~~~yNs~~li~~~G~i~~~y~K~~L~~~~e~~~~~~~~~~e~~~~~~~~~~~~~~~~ 161 (303)
T d1uf5a_ 82 EKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDV 161 (303)
T ss_dssp HHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEEE
T ss_pred HHHHhcCceEEEEeeeeeeecCCCeeEEEEEeeccccccccccccccCCCCccccccccccccccceecccCCcceeEEe
Confidence 999999999999954322 24679999999999999999999999987641 111 1123445566654 4789999
Q ss_pred CCceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCC---------CHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 228 DVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTT---------GPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 228 ~~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~---------~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
+++|||++||||.+|||+++.++++|||+++++++++... ...+|....++||+||++||+++|.
T Consensus 162 ~~~rig~~IC~D~~~pe~~~~la~~Ga~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~arA~en~~~vv~~n~ 235 (303)
T d1uf5a_ 162 DAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGK 235 (303)
T ss_dssp TTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEB
T ss_pred cCcEEEeeccccchhhHhhhhHhhCCCEEEEEeccccccCCcccccchhhcchhhhhhhhhhhcccceeeeccc
Confidence 9999999999999999999999999999999988764321 1236777789999999999999985
No 4
>d1emsa2 d.160.1.1 (A:10-280) NIT-FHIT fusion protein, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=100.00 E-value=1.1e-37 Score=279.18 Aligned_cols=209 Identities=35% Similarity=0.572 Sum_probs=178.6
Q ss_pred CCCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCC-CCCccchhhhhccCCCCcHHHHHHHHHH
Q 022660 79 PVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS-HDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (294)
Q Consensus 79 ~~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~-~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (294)
+.+++|||++|+++.+|++.|++++.+++++|++.|+|||||||++..++. .....+.+..++ ++.++.++++|
T Consensus 2 ~~~~~rVA~~Q~~~~~d~~~N~~~i~~~i~~A~~~gadlvvfPE~~~~~~~~~~~~~~~a~~~~-----~~~~~~l~~~a 76 (271)
T d1emsa2 2 ATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-----CEYMEKYRELA 76 (271)
T ss_dssp CCSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCcCeEEECCccccccCCCHHHHHHHHHhhc-----chHHHhhhhhh
Confidence 456799999999988999999999999999999999999999999754443 233333443333 47899999999
Q ss_pred HhcCcEEEEeeeeeee---CCeeEEEEEEEccCCcEEEEEeecccCCCCCCCccccccccCccCCCC-CeEEEeCCceEE
Q 022660 158 RLLKITIVGGSIPERS---GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTDVGRIG 233 (294)
Q Consensus 158 ~~~~i~Iv~Gs~~~~~---~~~~yNsa~vi~~~G~il~~y~K~~L~~~~~P~~~~f~E~~~f~~G~~-~~v~~~~~grig 233 (294)
+++++++++|+.+.+. ++++||++++++++|+++.+|+|+||++++.+....+.|..++.+|+. ..+++++++++|
T Consensus 77 ~~~~i~v~~G~~~~~~~~~~~~~yNsa~vi~~~g~i~~~~~K~~l~~~~~~~~~~~~e~~~~~~g~~~~~v~~~~~~~~g 156 (271)
T d1emsa2 77 RKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLG 156 (271)
T ss_dssp HHTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEEC
T ss_pred hcccccccccceeeeeecCCCceeEEEEEEeCCceEEEeeeeecccccccccccceeccccccCCccccceeecCCcccc
Confidence 9999999999665553 467999999999999999999999998766555556677888999976 689999999999
Q ss_pred EeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 234 IGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 234 i~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
++||+|.+||++++.++++|+++|++|++++......+|+.+.+++|.++++|++.+|.
T Consensus 157 ~~iC~D~~~~e~~~~~~~~ga~~i~~p~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~n~ 215 (271)
T d1emsa2 157 LSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQ 215 (271)
T ss_dssp CCCGGGGGCHHHHHHHHHTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBB
T ss_pred ccccccccccHHHHHHHhhcCcEEEecccccccccchhHHHHHHHHHhhhccccccccc
Confidence 99999999999999999999999999998766555677888899999999999999995
No 5
>d1uf5a_ d.160.1.2 (A:) N-carbamoyl-D-aminoacid amidohydrolase {Agrobacterium sp. [TaxId: 361]}
Probab=81.62 E-value=3.3 Score=34.19 Aligned_cols=79 Identities=9% Similarity=-0.023 Sum_probs=42.9
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCe-eEEEEEEEc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFG 185 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi~ 185 (294)
.+.++.+|||+|+.|=.+............... ......++.-|.+++++++.-.....+++. ++-...+++
T Consensus 180 ~~~la~~Ga~ii~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~arA~en~~~vv~~n~~g~~~~~~~~G~S~I~~ 252 (303)
T d1uf5a_ 180 WRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTS-------FHHLLSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVA 252 (303)
T ss_dssp HHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHH-------HHHHHHHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEEC
T ss_pred hhhHhhCCCEEEEEeccccccCCcccccchhhc-------chhhhhhhhhhhcccceeeeccccccccccccccCcEEEe
Confidence 334567899999987544332221111111110 012233445677899998754333334443 334457899
Q ss_pred cCCcEEE
Q 022660 186 SDGKLIA 192 (294)
Q Consensus 186 ~~G~il~ 192 (294)
|+|+++.
T Consensus 253 p~G~vla 259 (303)
T d1uf5a_ 253 PTGEIVA 259 (303)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 9999874
No 6
>d1j31a_ d.160.1.2 (A:) Hypothetical protein PH0642 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.82 E-value=3 Score=33.79 Aligned_cols=66 Identities=12% Similarity=0.135 Sum_probs=40.3
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCC-eeEEEEEEEc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFG 185 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~-~~yNsa~vi~ 185 (294)
.+.++.+|+|||+.|=.+... .....++..|.+++++++.-.....+++ .++-...+++
T Consensus 155 ~~~~~~~ga~lil~p~~~~~~--------------------~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~i~~ 214 (262)
T d1j31a_ 155 ARTLALKGAEIIAHPANLVMP--------------------YAPRAMPIRALENRVYTITADRVGEERGLKFIGKSLIAS 214 (262)
T ss_dssp HHHHHHTTCSEEEEECCCCSS--------------------CHHHHHHHHHHHHTCEEEEECCCSEETTEECCCCCEEEC
T ss_pred HHHHHHhccccccCCcccccc--------------------cchhhhhhhhhcccceEEEEecccccCCccccCCCEEEe
Confidence 344568999999998332110 1223456678999999875432222333 2333456799
Q ss_pred cCCcEEE
Q 022660 186 SDGKLIA 192 (294)
Q Consensus 186 ~~G~il~ 192 (294)
|+|+++.
T Consensus 215 p~G~~l~ 221 (262)
T d1j31a_ 215 PKAEVLS 221 (262)
T ss_dssp TTSCEEE
T ss_pred CCCCEEE
Confidence 9999874
No 7
>d1emsa2 d.160.1.1 (A:10-280) NIT-FHIT fusion protein, N-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=76.88 E-value=4.5 Score=32.66 Aligned_cols=70 Identities=16% Similarity=0.150 Sum_probs=41.9
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeee-CC-eeEEEEEEE
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GD-RLYNTCCVF 184 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~-~~-~~yNsa~vi 184 (294)
.+..+..|+|+|+.|=... ..... ......++..|.+++++++.......+ ++ ..+-.+.++
T Consensus 169 ~~~~~~~ga~~i~~p~a~~--------~~~~~--------~~~~~~~~~~a~~~~~~~~~~n~~g~~~~~~~~~G~S~I~ 232 (271)
T d1emsa2 169 SLWNRKRGAQLLSFPSAFT--------LNTGL--------AHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVV 232 (271)
T ss_dssp HHHHHHTTCSEEECCBCCC--------HHHHH--------HHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEE
T ss_pred HHHHHhhcCcEEEeccccc--------ccccc--------hhHHHHHHHHHhhhccccccccccccCCCCCEEeeeeEEE
Confidence 3446789999999883211 01111 123445677888999998765332222 22 334356678
Q ss_pred ccCCcEEE
Q 022660 185 GSDGKLIA 192 (294)
Q Consensus 185 ~~~G~il~ 192 (294)
+|+|+++.
T Consensus 233 ~P~G~il~ 240 (271)
T d1emsa2 233 DPWGAVVA 240 (271)
T ss_dssp CTTSCEEE
T ss_pred cCCCcEEE
Confidence 99999864
No 8
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=57.50 E-value=16 Score=28.97 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=44.9
Q ss_pred ceEEEEEeccc--cccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHh
Q 022660 82 KFKVGLCQLSV--TADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (294)
Q Consensus 82 ~~rValvQ~~v--~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (294)
.|+|..++... ....+...+++++.++.|++.|++.|+++- +...... ...... ..++.+.++|++
T Consensus 63 gl~i~~l~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~----~~~~~~~-~~~~~~-------~~l~~l~~~a~~ 130 (271)
T d2q02a1 63 GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLCP----LNDGTIV-PPEVTV-------EAIKRLSDLFAR 130 (271)
T ss_dssp TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEECC----CCSSBCC-CHHHHH-------HHHHHHHHHHHT
T ss_pred CCcEEEeecccccCCCCHHHHHHHHHHHHHHHHcCCcEEEEec----CCCCccc-hHHHHH-------HHHHHHHHHhcc
Confidence 35655554432 222355678889999999999999888642 2111110 111111 367788899999
Q ss_pred cCcEEEE
Q 022660 160 LKITIVG 166 (294)
Q Consensus 160 ~~i~Iv~ 166 (294)
+|+.+.+
T Consensus 131 ~gv~l~l 137 (271)
T d2q02a1 131 YDIQGLV 137 (271)
T ss_dssp TTCEEEE
T ss_pred CCeEEEE
Confidence 9998875
No 9
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}
Probab=56.96 E-value=3 Score=31.27 Aligned_cols=33 Identities=21% Similarity=0.481 Sum_probs=26.2
Q ss_pred eEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 83 FKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 83 ~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
|||+++ .|.-.|+..+++.++.+.+.++|.|++
T Consensus 1 MkI~ii-----SDiHgn~~al~~vl~~~~~~~~D~ii~ 33 (165)
T d1s3la_ 1 MKIGIM-----SDTHDHLPNIRKAIEIFNDENVETVIH 33 (165)
T ss_dssp CEEEEE-----CCCTTCHHHHHHHHHHHHHSCCSEEEE
T ss_pred CEEEEE-----EeCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 688887 455567888888888888899999984
No 10
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.07 E-value=5 Score=32.40 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=40.8
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCC--eeEEEEEEE
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD--RLYNTCCVF 184 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~--~~yNsa~vi 184 (294)
.+....+|+++|+.|=..... ... ......+...|.+++++++.-......++ ..+=...++
T Consensus 177 ~r~~~~~~~~~i~~~~~~~~~--------~~~--------~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii 240 (281)
T d1f89a_ 177 AMLSARKGAFAMIYPSAFNTV--------TGP--------LHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVV 240 (281)
T ss_dssp HHHHHHTTEEEEEEECCCBTT--------HHH--------HHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEE
T ss_pred hhhhhcccccceeEeeccccc--------ccc--------ccccchhhhhcccccccceeeeecccCCCCcEeeeceEEE
Confidence 344578899999998543211 000 01334456678999999876532221222 233345679
Q ss_pred ccCCcEEE
Q 022660 185 GSDGKLIA 192 (294)
Q Consensus 185 ~~~G~il~ 192 (294)
+|+|+++.
T Consensus 241 ~p~G~vl~ 248 (281)
T d1f89a_ 241 DPRGKIVA 248 (281)
T ss_dssp CTTSCEEE
T ss_pred cCCCCEEE
Confidence 99998863
No 11
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=48.54 E-value=3.9 Score=31.28 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHHHHHHHHCCCcEEEcC
Q 022660 94 ADKERNIAHARRAIEEAAEKGAKLILLP 121 (294)
Q Consensus 94 ~d~~~n~~~i~~~i~~A~~~gadLVVfP 121 (294)
+|.-.|++.+++.++.+.+.++|+||+=
T Consensus 12 sd~hg~~eale~~~~~~~~~~~D~vv~~ 39 (228)
T d1uf3a_ 12 SNPMGDLEALEKFVKLAPDTGADAIALI 39 (228)
T ss_dssp ECCTTCHHHHHHHHTHHHHHTCSEEEEE
T ss_pred eCCCCCHHHHHHHHHHHhhcCCCEEEEC
Confidence 5566668889999999999999999863
No 12
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=46.57 E-value=29 Score=25.91 Aligned_cols=60 Identities=20% Similarity=0.211 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 94 ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 94 ~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
.....+++ ..++.+.+.++.+|+........+....... ....+.+.+.++|+++++.++
T Consensus 108 ~~~~~~l~---~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~v~~i 167 (233)
T d1k7ca_ 108 LTFPAYLE---NAAKLFTAKGAKVILSSQTPNNPWETGTFVN---------SPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp EBHHHHHH---HHHHHHHHTTCEEEEECCCCCCTTTTSSCCC---------CCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHH---HHHHHHHhcCCEEEEEecCccccccccchhh---------hHHHHHHHHHHHHHHcCCCee
Confidence 34455544 4456667889998887665544332221111 123577889999999998775
No 13
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]}
Probab=45.96 E-value=15 Score=30.94 Aligned_cols=62 Identities=10% Similarity=-0.055 Sum_probs=44.5
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
-++.++-+++...|++.+.+.+.|++-|+.-+. +...-+..|....+..+.+.++.||.+++
T Consensus 216 p~V~i~~~~pg~~~~~l~~~~~~g~~GiVl~g~-G~G~vp~~~~~~l~~~~~~~gi~VV~~Sq 277 (331)
T d1agxa_ 216 PGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGT-GNGSMANYLVPEVRKLHDEQGLQIVRSSR 277 (331)
T ss_dssp CCEEEEECCSSCCTHHHHHHHTTTCSEEEEEEB-TTTBCCTTHHHHHHHHHHTTCCEEEEEES
T ss_pred CCEEEEEcCCCCCHHHHHHhhhcCCcEEEEecc-CCCCCCHHHHHHHHHHHHhCCeEEEEEEe
Confidence 389999999999999999999999988887433 22212234554444444478999998875
No 14
>d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli [TaxId: 562]}
Probab=43.99 E-value=30 Score=27.45 Aligned_cols=56 Identities=11% Similarity=-0.207 Sum_probs=38.5
Q ss_pred EEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCCCC--HHHHHHHHHHHHHHhCCeeEee
Q 022660 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTTG--PLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 233 gi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~~~--~~~~~~l~~~RAiEn~~~vv~a 290 (294)
++++|-|. .+++.++..+.|+|+|+. |.-|..... ...+.. ...+.+++++.++++
T Consensus 37 kI~v~lD~-t~~vi~~A~~~g~dlIItHHP~~f~~~~~~~~~~~~~-~i~~lik~~I~vy~~ 96 (247)
T d1nmpa_ 37 KIVTGVTA-SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRN-RLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEEC-CHHHHHHHHHTTCSEEEEEECSCCTTCCCCCCHHHHH-HHHHHHHTTCEEEEC
T ss_pred EEEEEEcC-CHHHHHHHHHCCCCEEEECCccccCCCCccccCcchH-HHHHHHHCCcceEEc
Confidence 67778887 467888888999999995 766543211 122222 245788999999876
No 15
>d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]}
Probab=43.14 E-value=24 Score=30.20 Aligned_cols=58 Identities=17% Similarity=0.023 Sum_probs=41.4
Q ss_pred EEEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCC--CCHHHHHHHHHHHHHHhCCeeEee
Q 022660 232 IGIGICYDIRFQELAMIYGARGAHLICY--PGAFNMT--TGPLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 232 igi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~--~~~~~~~~l~~~RAiEn~~~vv~a 290 (294)
=++++|-|. .+++.++...+|||+|+. |--|... ...+.|..-...++++|++.|.++
T Consensus 38 ~~I~valD~-t~~vi~eAi~~~adlIItHHPl~f~~~k~l~~~~~~~~~~~~li~~~I~vys~ 99 (370)
T d2gx8a1 38 RHVLIALDV-TEEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAA 99 (370)
T ss_dssp CEEEEESSC-CHHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEEcC-CHHHHHHHHHCCCCEEEECCCCCcCCcccccCCCchhHHHHHHHHCCCeEEEe
Confidence 477888886 678888888999999996 5545321 122334444567889999999875
No 16
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}
Probab=40.95 E-value=5.9 Score=29.66 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=22.4
Q ss_pred eEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 83 FKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 83 ~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
|||+++ +|.-.|.+.+++.++.+.+.++|.||+
T Consensus 2 Mki~ii-----SDiHg~~~al~~vl~~~~~~~~D~iv~ 34 (184)
T d1su1a_ 2 MKLMFA-----SDIHGSLPATERVLELFAQSGAQWLVI 34 (184)
T ss_dssp CEEEEE-----CCCTTBHHHHHHHHHHHHHHTCSEEEE
T ss_pred cEEEEE-----eecCCCHHHHHHHHHHHhhcCCCEEEE
Confidence 688887 344445666677777666778888774
No 17
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=39.93 E-value=22 Score=28.56 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=45.6
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.|..|...+++++++=|-. +|. |. ... ....+.|.++.++.++++++-++...+-..+-+.++++.
T Consensus 149 ~IAraL~~~P~iLllDEPt-~~L---D~---~~~-------~~i~~~l~~l~~~~g~tvi~vTHd~~~~~~~~drv~vm~ 214 (240)
T d1g2912 149 ALGRAIVRKPQVFLMDEPL-SNL---DA---KLR-------VRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMN 214 (240)
T ss_dssp HHHHHHHTCCSEEEEECTT-TTS---CH---HHH-------HHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEE
T ss_pred HHHHHHhcCCCEEEecCCC-ccc---CH---HHH-------HHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEE
Confidence 4455667788999998853 221 10 000 147788999999999988875443322234456667775
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
+|+++..
T Consensus 215 -~G~iv~~ 221 (240)
T d1g2912 215 -RGVLQQV 221 (240)
T ss_dssp -TTEEEEE
T ss_pred -CCEEEEE
Confidence 8988643
No 18
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.45 E-value=18 Score=29.02 Aligned_cols=72 Identities=14% Similarity=0.156 Sum_probs=43.7
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEcc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~ 186 (294)
+..|...++++++|=|-.. +. |. .. .....+.+.++.++.++++++-++...+-.++-+..+++.
T Consensus 147 iAraL~~~P~iLllDEPts-~L---D~-~~---------~~~i~~ll~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~- 211 (239)
T d1v43a3 147 VARAIVVEPDVLLMDEPLS-NL---DA-KL---------RVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMN- 211 (239)
T ss_dssp HHHHHTTCCSEEEEESTTT-TS---CH-HH---------HHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEE-
T ss_pred HHhhhccCCCceeecCCcc-cC---CH-HH---------HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEE-
Confidence 3334556777777777532 11 10 00 0147788999999999988875543333334556667775
Q ss_pred CCcEEEE
Q 022660 187 DGKLIAK 193 (294)
Q Consensus 187 ~G~il~~ 193 (294)
+|+++..
T Consensus 212 ~G~iv~~ 218 (239)
T d1v43a3 212 RGQLLQI 218 (239)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8988754
No 19
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=38.99 E-value=36 Score=27.40 Aligned_cols=58 Identities=12% Similarity=0.014 Sum_probs=37.2
Q ss_pred EEEeeeccCcCcHHHHHHHHCCCeEEEE--cCCCCCCCC--HHHHHHHHHHHHHHhCCeeEee
Q 022660 232 IGIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTTG--PLHWELLQRARATDNQVLPHSP 290 (294)
Q Consensus 232 igi~ICyD~~fpe~~r~la~~Gadlil~--ps~~~~~~~--~~~~~~l~~~RAiEn~~~vv~a 290 (294)
=++++|-|. .+++.+....+|||+|+. |.-|..... ...+..-...++++|++.+.++
T Consensus 37 ~kI~v~lD~-t~~vi~~Ai~~~adlIItHHp~~f~~~~~~~~~~~~~~~~~~lik~~I~vy~~ 98 (265)
T d2fywa1 37 QRVMVALDI-REETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 98 (265)
T ss_dssp SEEEEESCC-CHHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEEcC-CHHHHHHHHHcCCCEEEecCCcceeccccccCCChHHHHHHHHHhCCCeEEEe
Confidence 357778887 467777888899999996 444432211 1223333345677999988764
No 20
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=38.55 E-value=24 Score=28.38 Aligned_cols=74 Identities=23% Similarity=0.220 Sum_probs=46.4
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.|..|...+++++++=|-.. +. |. ... ....+.|.++.++.++++++-++...+-..+-+..+++.
T Consensus 150 aiARaL~~~P~llllDEPt~-~L---D~-~~~---------~~i~~~i~~l~~~~g~tvi~vTHd~~~~~~~~dri~vm~ 215 (242)
T d1oxxk2 150 ALARALVKDPSLLLLDEPFS-NL---DA-RMR---------DSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLV 215 (242)
T ss_dssp HHHHHHTTCCSEEEEESTTT-TS---CG-GGH---------HHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEE
T ss_pred HHHhHHhhcccceeecCCcc-CC---CH-HHH---------HHHHHHHHHHHhccCCEEEEEECCHHHHHHhCCEEEEEE
Confidence 45556677899999998542 21 10 000 247788899999999988775443222234455666775
Q ss_pred cCCcEEEEE
Q 022660 186 SDGKLIAKH 194 (294)
Q Consensus 186 ~~G~il~~y 194 (294)
+|+++..=
T Consensus 216 -~G~iv~~g 223 (242)
T d1oxxk2 216 -KGKLVQVG 223 (242)
T ss_dssp -TTEEEEEE
T ss_pred -CCEEEEEc
Confidence 89887543
No 21
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=38.30 E-value=39 Score=28.92 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=46.6
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
.+++|..|+-.....+....+.+.|+|++++-++..+. ...-..+...|...-.+.||+-|+
T Consensus 139 ~l~vgaAvg~~~~~~~ra~~L~~aG~D~ivID~AhG~s--~~~~~~i~~ik~~~~~v~vIaGNV 200 (388)
T d1eepa_ 139 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHS--TRIIELIKKIKTKYPNLDLIAGNI 200 (388)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSS--HHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred cchhhhccCCCHHHHHHHHHHHhhccceeeeeccccch--HHHHHHHHHHHHHCCCCceeeccc
Confidence 35789999888878888889999999999998775432 233345556676666889998886
No 22
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=37.59 E-value=87 Score=24.45 Aligned_cols=105 Identities=19% Similarity=0.156 Sum_probs=54.0
Q ss_pred ccCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCC
Q 022660 48 HSSNPNPNPIMASSSKPEQARAPPALPLPTPPVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSP 127 (294)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~g 127 (294)
|.+.|+..++|..++.-..+..+.. +....+||.++-.....+ ..|..-+....+.+.+.|+++.++= +..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~KIl~I~GS~R~~-s~s~~la~~~~~~l~~~G~ev~~id---L~d 75 (233)
T d2fzva1 5 HLSDPDSLPALDKSFAIERPALGLA-----PDAPPVRILLLYGSLRAR-SFSRLAVEEAARLLQFFGAETRIFD---PSD 75 (233)
T ss_dssp CCSSTTCCTTSCTTTCCSCTTTTTS-----CCCSCCEEEEEESCCSSS-CHHHHHHHHHHHHHHHTTCEEEEBC---CTT
T ss_pred cCCCCcCCCccChhhccCCccccCC-----CCCCCCeEEEEeCCCCCC-CHHHHHHHHHHHHhhhcCeEEEEEc---cCC
Confidence 3344554555555555444444332 233457999998887533 1233333344445667788887763 112
Q ss_pred CCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeee
Q 022660 128 YSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPE 171 (294)
Q Consensus 128 y~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~ 171 (294)
++... .... ...+..+.+.+..++.+..|++ .|+
T Consensus 76 lpl~~---~~~~-----~~~~~v~~l~~~l~~AD~vIi~--tP~ 109 (233)
T d2fzva1 76 LPLPD---QVQS-----DDHPAVKELRALSEWSEGQVWC--SPE 109 (233)
T ss_dssp CCCTT---TSGG-----GCCHHHHHHHHHHHHCSEEEEE--EEE
T ss_pred CCCCC---cccc-----cCCHHHHHHHHHHhhcCeeEEE--ccc
Confidence 21111 0000 1124667777777777776654 355
No 23
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=37.17 E-value=23 Score=28.18 Aligned_cols=73 Identities=23% Similarity=0.237 Sum_probs=45.8
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.|..|...++++++|=|-.. +. |. ... ....+.+.++.++.+++++.-++...+-..+-+..+++.
T Consensus 137 aiAraL~~~P~iLllDEPts-~L---D~-~~~---------~~i~~~l~~l~~~~g~tii~vtHd~~~~~~~~drv~vm~ 202 (229)
T d3d31a2 137 ALARALVTNPKILLLDEPLS-AL---DP-RTQ---------ENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVM 202 (229)
T ss_dssp HHHHHTTSCCSEEEEESSST-TS---CH-HHH---------HHHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEES
T ss_pred hhhhhhhccCCceeecCCCc-CC---CH-HHH---------HHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhCCEEEEEE
Confidence 45556677889999888542 21 10 000 147788899999999888765443333334556677774
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
+|+++..
T Consensus 203 -~G~iv~~ 209 (229)
T d3d31a2 203 -DGKLIQV 209 (229)
T ss_dssp -SSCEEEE
T ss_pred -CCEEEEE
Confidence 8998744
No 24
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=36.74 E-value=26 Score=27.87 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=46.8
Q ss_pred HHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEE
Q 022660 103 ARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCC 182 (294)
Q Consensus 103 i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~ 182 (294)
-+-.|..|...+++++++=|-. ++. | +... ..+.+.|.++.+++++++++-++....- ++-+..+
T Consensus 152 QRvaIAraL~~~P~lLllDEPT-s~L---D-~~~~---------~~i~~~l~~l~~~~g~tii~vTHd~~~a-~~~drv~ 216 (230)
T d1l2ta_ 152 QRVAIARALANNPPIILADQPT-GAL---D-SKTG---------EKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERII 216 (230)
T ss_dssp HHHHHHHHHTTCCSEEEEESTT-TTS---C-HHHH---------HHHHHHHHHHHHTTCCEEEEECSCHHHH-TTSSEEE
T ss_pred HHHHHHhhhhcCCCEEEecCCc-ccc---C-HHHH---------HHHHHHHHHHHHhhCCEEEEECCCHHHH-HhCCEEE
Confidence 3445666777899999999963 221 1 0111 2478889999999999887755432222 3556667
Q ss_pred EEccCCcEE
Q 022660 183 VFGSDGKLI 191 (294)
Q Consensus 183 vi~~~G~il 191 (294)
++. +|+++
T Consensus 217 ~m~-~G~Iv 224 (230)
T d1l2ta_ 217 YLK-DGEVE 224 (230)
T ss_dssp EEE-TTEEE
T ss_pred EEE-CCEEE
Confidence 774 89875
No 25
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=36.16 E-value=56 Score=24.02 Aligned_cols=75 Identities=16% Similarity=0.081 Sum_probs=42.7
Q ss_pred EEEEEecccc-------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHH
Q 022660 84 KVGLCQLSVT-------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (294)
Q Consensus 84 rValvQ~~v~-------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (294)
.+.+++.... ...+...+.++++++.+.+.++++|++--.....+.... ..... ....+.+.+.++
T Consensus 73 D~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~~~~vl~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~ 145 (208)
T d2o14a2 73 DYFMLQLGINDTNPKHKESEAEFKEVMRDMIRQVKAKGADVILSTPQGRATDFTSE-GIHSS------VNRWYRASILAL 145 (208)
T ss_dssp CEEEEECCTGGGCGGGCCCHHHHHHHHHHHHHHHHTTTCEEEEECCCCCTTCBCTT-SCBCC------TTSTTHHHHHHH
T ss_pred CEEEEEcCCCcccccccccHHHHHHHHHHHHHHHHhcCCceeeccccccccccccc-cchHH------HHHHHHHHHHHh
Confidence 3566666421 245555667777788888889998887221111110000 00001 123477889999
Q ss_pred HHhcCcEEE
Q 022660 157 ARLLKITIV 165 (294)
Q Consensus 157 A~~~~i~Iv 165 (294)
|+++++.++
T Consensus 146 a~~~~v~~v 154 (208)
T d2o14a2 146 AEEEKTYLI 154 (208)
T ss_dssp HHHTTCEEE
T ss_pred hccCCcEEe
Confidence 999998764
No 26
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=34.58 E-value=13 Score=28.50 Aligned_cols=22 Identities=9% Similarity=0.326 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhcCcEEEEeee
Q 022660 148 PSTAMLSEVARLLKITIVGGSI 169 (294)
Q Consensus 148 ~~~~~l~~lA~~~~i~Iv~Gs~ 169 (294)
.+++.|.++.++.++.++.|..
T Consensus 51 evi~~l~~l~~~~~v~~v~GNH 72 (251)
T d1nnwa_ 51 EVIEVIKDLTKKENVKIIRGKY 72 (251)
T ss_dssp HHHHHHHHHHHHSCEEEECCHH
T ss_pred HHHHHHHHHhhcCCEEEEeccH
Confidence 5788899998888898888843
No 27
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=33.98 E-value=24 Score=24.74 Aligned_cols=44 Identities=14% Similarity=0.045 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 100 IAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 100 ~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
-+.+.+.++++.+.|+.-+.+.... ..+.+.++++++|+.++++
T Consensus 66 ~~~~~~~l~~~~~~g~k~v~~~~g~------------------------~~~~~~~~a~~~gi~vigp 109 (116)
T d1y81a1 66 PKVGLQVAKEAVEAGFKKLWFQPGA------------------------ESEEIRRFLEKAGVEYSFG 109 (116)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTS------------------------CCHHHHHHHHHHTCEEECS
T ss_pred HHHHHHHHHHHHhcCCceEEeccch------------------------hhHHHHHHHHHcCCEEEcC
Confidence 3456677777888898877653221 1234788999999988765
No 28
>d2ocda1 c.88.1.1 (A:2-337) Asparaginase type II {Vibrio cholerae [TaxId: 666]}
Probab=33.94 E-value=45 Score=27.74 Aligned_cols=63 Identities=10% Similarity=-0.104 Sum_probs=44.9
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCC-CCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGA-FNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~-~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
..|+.++-||=...+++.+.+...|++-|+.-+. .+..+....|... ..+|.++|+.||.+++
T Consensus 209 ~~~V~il~~~pG~~~~~l~~~l~~~~~GiVL~~~G~Gn~p~~~~~~~~-l~~a~~~gi~VV~~Sr 272 (336)
T d2ocda1 209 PQPIGVITMYPGISHEVIRNTLLQPVNAMILLTFGVGNAPQNPELLAQ-LKAASERGVIVVNLTQ 272 (336)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTCTTCCEEEEEEBTTTBCCCCHHHHHH-HHHHHHTTCEEEEEES
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhcCCCceEEEEecCCCCcCCHHHHHH-HHHHHhcCCEEEEecc
Confidence 3589999999999999999888899998886433 2222211233333 4568899999998764
No 29
>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}
Probab=33.92 E-value=63 Score=21.72 Aligned_cols=43 Identities=12% Similarity=-0.177 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 149 STAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 149 ~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
-++.+.+.+++.|+.++.. +.....+.+ .+++.||+|..+..|
T Consensus 82 ~l~~~~~~l~~~G~~~~~~--p~~~~~G~~-~~~~~DPdG~~iel~ 124 (128)
T d1klla_ 82 SVDKKYAELVDAGYEGHLK--PWNAVWGQR-YAIVKDPDGNVVDLF 124 (128)
T ss_dssp HHHHHHHHHHHTTCEEEEE--EEECTTSEE-EEEEECTTSCEEEEE
T ss_pred hhHHHHHHHHhccCccccC--CeEcCCCcE-EEEEECCCCCEEEEE
Confidence 3455666667788888765 333333333 468899999988765
No 30
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]}
Probab=33.75 E-value=53 Score=27.13 Aligned_cols=61 Identities=15% Similarity=0.007 Sum_probs=45.0
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
-++.++.+|-...+++.+.+...|++-|++-+.- ...-+..|.. .-.+|.+.++.||.+++
T Consensus 216 ~~V~ii~~~pG~~~~~l~~~l~~g~~GiVl~g~G-~Gnvp~~~~~-~l~~a~~~gipVV~~Sq 276 (325)
T d1o7ja_ 216 PKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMG-AGSVSVRGIA-GMRKALEKGVVVMRSTR 276 (325)
T ss_dssp CCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBT-TTBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CCEEEEEcCCCCCHHHHHHHHhcCCCEEEEeeeC-CCCCCHHHHH-HHHHHHhCCCEEEEEEe
Confidence 4799999999989999998888999988875542 1112233433 35667799999999875
No 31
>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}
Probab=32.90 E-value=39 Score=24.39 Aligned_cols=48 Identities=17% Similarity=0.116 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEeec
Q 022660 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKI 197 (294)
Q Consensus 148 ~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K~ 197 (294)
..+..+.+..++.++.+..+ +.+.+....-++++.||+|..+..|-..
T Consensus 78 ~~~~~~~~~L~~~gv~~~~~--p~~~~~g~~~~~y~~DPdGn~iEl~~~~ 125 (162)
T d1mpya2 78 EDLLRAADLISMTDTSIDIG--PTRHGLTHGKTIYFFDPSGNRNEVFCGG 125 (162)
T ss_dssp HHHHHHHHHHHHHTCCEEEE--EEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred hhhhhHHHHHHHcCCccccC--ccccCCCCeEEEEEECCCCCEEEEEECC
Confidence 34455556666778888765 4444433344688999999988776543
No 32
>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=32.71 E-value=44 Score=22.38 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=25.7
Q ss_pred HHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEe
Q 022660 152 MLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (294)
Q Consensus 152 ~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~ 195 (294)
.+.+-.++.|+.++.+ +.....+. -.+++.||+|.++..|.
T Consensus 73 ~~~~~l~~~G~~i~~~--~~~~~~g~-~~~~~~DPdGn~ie~~~ 113 (115)
T d2i7ra1 73 QNYKRLNELGIKVLHG--PTVTDWGT-ESLLVQGPAGLVLDFYR 113 (115)
T ss_dssp HHHHHHHHHTCCEEEE--EEECTTSC-EEEEEECGGGCEEEEEE
T ss_pred HHHHHHHhhccccccc--eEEeeCCe-EEEEEECCCCCEEEEEE
Confidence 3444456678888876 33333222 25678999999987654
No 33
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=32.41 E-value=37 Score=26.64 Aligned_cols=77 Identities=13% Similarity=0.046 Sum_probs=45.9
Q ss_pred ceEEEEEecccc---c---cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHH
Q 022660 82 KFKVGLCQLSVT---A---DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSE 155 (294)
Q Consensus 82 ~~rValvQ~~v~---~---d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (294)
.+++..++.... . ..++.++.+.+.++.|...|+..|+++=..... . .......+.. -..++.+.+
T Consensus 59 gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~~~~~~-~-~~~~~~~~~~------~~~l~~l~~ 130 (278)
T d1i60a_ 59 HIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQ-K-IVKEEIKKSS------VDVLTELSD 130 (278)
T ss_dssp SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSS-C-CCHHHHHHHH------HHHHHHHHH
T ss_pred CCcEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCCC-C-CCHHHHHHHH------HHHHHHHHH
Confidence 356655554321 2 245678889999999999999998765332211 0 0111111111 135677888
Q ss_pred HHHhcCcEEEE
Q 022660 156 VARLLKITIVG 166 (294)
Q Consensus 156 lA~~~~i~Iv~ 166 (294)
.|+++|+.+.+
T Consensus 131 ~a~~~Gv~l~l 141 (278)
T d1i60a_ 131 IAEPYGVKIAL 141 (278)
T ss_dssp HHGGGTCEEEE
T ss_pred HHHHhCCeeee
Confidence 88999998765
No 34
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=30.84 E-value=28 Score=27.88 Aligned_cols=75 Identities=23% Similarity=0.289 Sum_probs=46.7
Q ss_pred HHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEE
Q 022660 104 RRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCV 183 (294)
Q Consensus 104 ~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~v 183 (294)
+-.|..|...+++++++=|-.. +. | ... .....+.|.++.++.++++++-++....-..+-+..++
T Consensus 148 RvaiAraL~~~P~lLllDEPt~-~L---D-----~~~-----~~~i~~~l~~l~~~~g~tvi~vTHdl~~~~~~~dri~v 213 (240)
T d3dhwc1 148 RVAIARALASNPKVLLCDEATS-AL---D-----PAT-----TRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAV 213 (240)
T ss_dssp HHHHHHHHHTCCSEEEEESGGG-SS---C-----HHH-----HHHHHHHHHHHHHHHCCEEEEEBSCHHHHHHHCSEEEE
T ss_pred HHHHhhhhccCCCeEEeccccc-cC---C-----HHH-----hhHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEE
Confidence 3355556778889999988532 21 1 000 02477889999999999888754433222344466666
Q ss_pred EccCCcEEEE
Q 022660 184 FGSDGKLIAK 193 (294)
Q Consensus 184 i~~~G~il~~ 193 (294)
+. +|+++..
T Consensus 214 l~-~G~iv~~ 222 (240)
T d3dhwc1 214 IS-NGELIEQ 222 (240)
T ss_dssp EE-TTEEEEE
T ss_pred EE-CCEEEEE
Confidence 74 8988644
No 35
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=30.81 E-value=53 Score=23.90 Aligned_cols=60 Identities=15% Similarity=0.166 Sum_probs=31.8
Q ss_pred cHHHHHHHHHHHHHHHHHCCCcEEEcCCCCC-CCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEE
Q 022660 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWN-SPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (294)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l-~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (294)
+.+...+.+...++++... .++|+.-... ....... ....+ ..+.+.++++|+++++.++
T Consensus 87 ~~~~~~~~l~~~i~~~~~~--~iiv~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~a~~~~v~~v 147 (195)
T d1yzfa1 87 TVATFRENLETMIHEIGSE--KVILITPPYADSGRRPER---PQTRI------KELVKVAQEVGAAHNLPVI 147 (195)
T ss_dssp CHHHHHHHHHHHHHHHCGG--GEEEECCCCCCTTTCTTS---CHHHH------HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHhcCC--CEEEEecccccccccccc---hHHHH------HHHHHHHHHHHHhhCCeEe
Confidence 4455666677777766554 4555422111 1111111 11111 1366788899999998765
No 36
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.37 E-value=27 Score=27.78 Aligned_cols=71 Identities=14% Similarity=0.120 Sum_probs=43.1
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEcc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~ 186 (294)
|..|...+++++++=|-.. |. |. ... ....+.|.++.++.++++++-++...+-..+-+..+++.
T Consensus 141 iAraL~~~P~illlDEPts-~L---D~-~~~---------~~i~~~l~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~- 205 (232)
T d2awna2 141 IGRTLVAEPSVFLLDEPLS-NL---DA-ALR---------VQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLD- 205 (232)
T ss_dssp HHHHHHTCCSEEEEESTTT-TS---CH-HHH---------HHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEE-
T ss_pred HHHHHhcCCCEEEEcCCCC-CC---CH-HHH---------HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEE-
Confidence 3445566788888888532 21 10 000 136778899999999988775443332234456677774
Q ss_pred CCcEEE
Q 022660 187 DGKLIA 192 (294)
Q Consensus 187 ~G~il~ 192 (294)
+|+++.
T Consensus 206 ~G~iv~ 211 (232)
T d2awna2 206 AGRVAQ 211 (232)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 898764
No 37
>d1wp0a1 c.47.1.10 (A:138-297) Thioredoxin-like protein Sco1 (YpmQ), soluble domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.85 E-value=42 Score=23.47 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=26.4
Q ss_pred HHHHHHHHhcCcEEEEeeeeeeeCCe---eEEEEEEEccCCcEEEEEee
Q 022660 151 AMLSEVARLLKITIVGGSIPERSGDR---LYNTCCVFGSDGKLIAKHRK 196 (294)
Q Consensus 151 ~~l~~lA~~~~i~Iv~Gs~~~~~~~~---~yNsa~vi~~~G~il~~y~K 196 (294)
..+..+++.+++..... .....++. ...+.+++|++|.++..|..
T Consensus 95 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~LId~~G~i~~~~~~ 142 (160)
T d1wp0a1 95 EEVDQVARAYRVYYSPG-PKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQ 142 (160)
T ss_dssp HHHHHHHHHTTCCEEEC-CCCGGGCCCEEECCEEEEECTTSCEEEEEET
T ss_pred HHhhHHhhhhheeeecc-cCCCCCCceEeccceEEEECCCCcEEEEECC
Confidence 44556667777654432 11111221 22467999999999887754
No 38
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.47 E-value=71 Score=26.65 Aligned_cols=62 Identities=15% Similarity=-0.013 Sum_probs=46.3
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
..++.++-||=...+++.+.+...|++-|+.-+. +...-+..|... ..+|.++|+.||.+.+
T Consensus 218 ~~~V~iv~~~pG~~~~~l~~~~~~~~~GiVl~g~-G~Gnvp~~~~~~-l~~a~~~gi~VV~~Sq 279 (352)
T d2d6fa2 218 EERVAFIKSYPGISPDIIKWHLDEGYRGIVIEGT-GLGHCPDTLIPV-IGEAHDMGVPVAMTSQ 279 (352)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHTTCSEEEEEEB-TTTBCCGGGHHH-HHHHHHTTCCEEEEET
T ss_pred CCceEEEEecCCCCHHHHHHHhhcCCcEEEEEEE-cCCCcchhHHHH-HHHHHhcCCeEEEecc
Confidence 4699999999999999999988899988886443 222223445443 4567899999999864
No 39
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=29.42 E-value=21 Score=26.62 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=23.6
Q ss_pred EEeccccccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCC
Q 022660 87 LCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSP 127 (294)
Q Consensus 87 lvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~g 127 (294)
++|.|+.... .+..+++....+.++|+|++-|....+
T Consensus 5 V~~~Nv~~~~----~~~~~l~~~i~~~~~DIi~lQE~~~~~ 41 (228)
T d1wdua_ 5 VLQANLQRKK----LATAELAIEAATRKAAIALIQEPYVGG 41 (228)
T ss_dssp EEEEECTTCH----HHHHHHHHHHHHHTCSEEEEESCCC--
T ss_pred EEeeccCCCh----HHHHHHHHHHHhcCCCEEEEECCCcCC
Confidence 5667765432 233445555667799999999976543
No 40
>d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A [TaxId: 306]}
Probab=29.28 E-value=38 Score=28.27 Aligned_cols=61 Identities=10% Similarity=-0.018 Sum_probs=44.3
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
-++.++-+|=...+++.+.+...|++-|+.-+. +...-+..|.. .-.++.++|+.||.+++
T Consensus 215 p~V~il~~~pG~~~~~l~~~~~~g~~GiVl~g~-G~G~~p~~~~~-~l~~~~~~gi~VV~~Sq 275 (330)
T d4pgaa_ 215 PQVDIAYSYGNVTDTAYKALAQNGAKALIHAGT-GNGSVSSRVVP-ALQQLRKNGTQIIRSSH 275 (330)
T ss_dssp CCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEB-TTTBCCTTTHH-HHHHHHHTTCEEEEEES
T ss_pred CcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecc-CCCCCCHHHHH-HHHHHHHCCCEEEEEee
Confidence 379999999999999999999999998887543 22222233433 35567789999998865
No 41
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.87 E-value=30 Score=25.03 Aligned_cols=44 Identities=23% Similarity=0.152 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEe
Q 022660 100 IAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (294)
Q Consensus 100 ~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (294)
-+.+.+.++++.+.|+..+.|.... +.+.+.++|+++|+.+++.
T Consensus 84 ~~~~~~~~~e~~~~g~k~v~~~~G~------------------------~~ee~~~~a~~~gi~vig~ 127 (139)
T d2d59a1 84 PKLTMEYVEQAIKKGAKVVWFQYNT------------------------YNREASKKADEAGLIIVAN 127 (139)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECTTC------------------------CCHHHHHHHHHTTCEEEES
T ss_pred HHHHHHHHHHHHHhCCCEEEEeccc------------------------cCHHHHHHHHHCCCEEEcC
Confidence 4567777888888899988875442 1134678899999988765
No 42
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=26.68 E-value=19 Score=26.96 Aligned_cols=35 Identities=9% Similarity=0.045 Sum_probs=22.1
Q ss_pred CCceEEEEEeccccccHHHHHHHHHHHHHHHHHCCCcEEEc
Q 022660 80 VAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILL 120 (294)
Q Consensus 80 ~~~~rValvQ~~v~~d~~~n~~~i~~~i~~A~~~gadLVVf 120 (294)
|.++||+++ .|.-.|...+++.++.. ..++|+|+.
T Consensus 1 m~~~kI~vi-----SD~Hgn~~al~~vl~~~-~~~~D~iih 35 (173)
T d3ck2a1 1 MAKQTIIVM-----SDSHGDSLIVEEVRDRY-VGKVDAVFH 35 (173)
T ss_dssp CCCEEEEEE-----CCCTTCHHHHHHHHHHH-TTTSSEEEE
T ss_pred CCCCEEEEE-----eccCCCHHHHHHHHHHh-hcCCCEEEE
Confidence 567899998 34444556666666543 456887763
No 43
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=26.57 E-value=23 Score=28.47 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=42.2
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEcc
Q 022660 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (294)
Q Consensus 107 i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~ 186 (294)
|..|...+++++++=|-.. |. |. ... ....+.+.++.++.++++++-++...+-..+-+..+++.
T Consensus 137 iAral~~~P~illlDEPts-~L---D~-~~~---------~~i~~~i~~l~~~~g~tvi~vtHd~~~~~~~adri~vm~- 201 (240)
T d2onka1 137 LARALVIQPRLLLLDEPLS-AV---DL-KTK---------GVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVML- 201 (240)
T ss_dssp HHHHHTTCCSSBEEESTTS-SC---CH-HHH---------HHHHHHHHHHHHHHTCCEEEEESCHHHHHHHCSEEEEEE-
T ss_pred HHHHHhccCCceEecCccc-cC---CH-HHH---------HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEE-
Confidence 3344556677777777432 11 10 000 147788999999999888765443232234455666775
Q ss_pred CCcEEEE
Q 022660 187 DGKLIAK 193 (294)
Q Consensus 187 ~G~il~~ 193 (294)
+|+++..
T Consensus 202 ~G~ii~~ 208 (240)
T d2onka1 202 NGRIVEK 208 (240)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8988653
No 44
>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}
Probab=25.91 E-value=21 Score=24.90 Aligned_cols=47 Identities=9% Similarity=0.021 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEE
Q 022660 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (294)
Q Consensus 148 ~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y 194 (294)
..++.+.+..++.++.+..+............+.++.||+|..+..|
T Consensus 70 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~ 116 (131)
T d1lgta1 70 AGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIY 116 (131)
T ss_dssp HHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEE
Confidence 35667777777888888766322111222334467779999988765
No 45
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.88 E-value=85 Score=21.97 Aligned_cols=51 Identities=16% Similarity=-0.033 Sum_probs=34.2
Q ss_pred cCcHHHHHHHHCCCeEEEEcCCCCCCCCHH--HHHHHHHHHHHHhCCeeEeec
Q 022660 241 RFQELAMIYGARGAHLICYPGAFNMTTGPL--HWELLQRARATDNQVLPHSPF 291 (294)
Q Consensus 241 ~fpe~~r~la~~Gadlil~ps~~~~~~~~~--~~~~l~~~RAiEn~~~vv~an 291 (294)
..+++.+.+.+.|+.-+++.+......+.. ....-....|.++++-++.+|
T Consensus 76 ~~~~~~~~~~~~g~~~~vi~s~Gf~e~~~~~~~~~~~l~~~a~~~girv~GPN 128 (129)
T d2csua1 76 FVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPN 128 (129)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSS
T ss_pred HhHHHHHHHHHcCCCEEEEecccccccchhhHHHHHHHHHHHHHcCCEEeCCC
Confidence 457888899999999776665522222332 223334677889999999887
No 46
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]}
Probab=24.46 E-value=97 Score=25.46 Aligned_cols=61 Identities=16% Similarity=-0.070 Sum_probs=45.3
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
-++.++-+|=...+++.+.+...|++-|+.-+.-. ..-+..|.. ...+|.+.|+.||.+++
T Consensus 214 p~V~il~~~pG~~~~~l~~~l~~g~~GiVl~g~G~-Gnvp~~~~~-~l~~a~~~gi~Vv~~Sq 274 (328)
T d1wsaa_ 214 PRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGN-GNPFPLTQN-ALEKAAKSGVVVARSSR 274 (328)
T ss_dssp CCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBTT-TBCCHHHHH-HHHHHHHTTCEEEEEES
T ss_pred CceEEEEeCCCCCHHHHHHHHhCCCcEEEEEcccC-CCCCHHHHH-HHHHHHhcCcEEEEEEe
Confidence 48999999988899999998889998887765422 212244444 35678899999998864
No 47
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=23.72 E-value=1e+02 Score=25.31 Aligned_cols=61 Identities=15% Similarity=-0.101 Sum_probs=45.2
Q ss_pred ceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 230 GRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 230 grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
-++.++.+|=...++..+.+...|++=|+.-+. +...-+..|... ..++.++|+.||.+++
T Consensus 212 p~V~il~~~pG~~~~~l~~ll~~~~~GiVl~g~-G~Gnvp~~~~~~-l~~a~~~gi~VV~~sq 272 (326)
T d1nnsa_ 212 PKVGIVYNYANASDLPAKALVDAGYDGIVSAGV-GNGNLYKSVFDT-LATAAKTGTAVVRSSR 272 (326)
T ss_dssp CCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEB-TTTBCCHHHHHH-HHHHHHTTCEEEEEES
T ss_pred CceEEEEcCCCCCHHHHHHHHhhcCceEEEEEE-CCCCCCHHHHHH-HHHHHhCCCEEEEEec
Confidence 389999999998999999988899888777543 222223445443 5577899999998875
No 48
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=23.30 E-value=1.1e+02 Score=24.01 Aligned_cols=72 Identities=17% Similarity=0.046 Sum_probs=44.2
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.|..|...++++++|=|-. .|.. . ... ....+.+.++.+ .|++|++-++...+-..+-...+++.
T Consensus 160 ~iAraL~~~P~llilDEPt-~gLD---~---~~~-------~~i~~~i~~l~~-~g~til~vsHdl~~~~~~~Drv~vm~ 224 (254)
T d1g6ha_ 160 EIGRALMTNPKMIVMDEPI-AGVA---P---GLA-------HDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMF 224 (254)
T ss_dssp HHHHHHHTCCSEEEEESTT-TTCC---H---HHH-------HHHHHHHHHHHH-TTCEEEEECSCCSTTGGGCSEEEEEE
T ss_pred HHHHHHHhCcCchhhcCCc-ccCC---H---HHH-------HHHHHHHHHHHH-CCCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 4555778899999999964 2211 0 000 136677888754 47877764443333345566677775
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
+|+++..
T Consensus 225 -~G~iv~~ 231 (254)
T d1g6ha_ 225 -NGQIIAE 231 (254)
T ss_dssp -TTEEEEE
T ss_pred -CCEEEEE
Confidence 8988754
No 49
>d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=23.17 E-value=73 Score=22.66 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEE
Q 022660 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVF 184 (294)
Q Consensus 148 ~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi 184 (294)
.+.+-+.+.|+++++.|++|- ...+..+.-+..++
T Consensus 99 ~~~~Gi~~~~~~~~~~liGGd--t~~~~~l~is~t~~ 133 (137)
T d3c9ua1 99 RFYIGVKRACEFYKCEVVGGN--ISKSEKIGISVFLV 133 (137)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE--EEECSSCEEEEEEE
T ss_pred HHHhhhhhhheeeCeEEEccc--ccCCCCeEEEEEEE
Confidence 477889999999999999993 33344444344433
No 50
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=22.90 E-value=47 Score=26.26 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=44.5
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.|..|...++++++|=|-. +|. |. ... ....+.+.+++++ |++|++-++...+-.++-+..+++.
T Consensus 149 ~iAraL~~~P~lLllDEPt-~gL---D~-~~~---------~~i~~~i~~l~~~-g~til~~tH~l~~~~~~~drv~vl~ 213 (240)
T d1ji0a_ 149 AIGRALMSRPKLLMMDEPS-LGL---AP-ILV---------SEVFEVIQKINQE-GTTILLVEQNALGALKVAHYGYVLE 213 (240)
T ss_dssp HHHHHHTTCCSEEEEECTT-TTC---CH-HHH---------HHHHHHHHHHHHT-TCCEEEEESCHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhCCCEeeecCCC-cCC---CH-HHH---------HHHHHHHHHHHhC-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 3445677899999999964 221 10 000 1477788888776 7766654443222234556667775
Q ss_pred cCCcEEEEEe
Q 022660 186 SDGKLIAKHR 195 (294)
Q Consensus 186 ~~G~il~~y~ 195 (294)
+|+++..-.
T Consensus 214 -~G~iv~~g~ 222 (240)
T d1ji0a_ 214 -TGQIVLEGK 222 (240)
T ss_dssp -TTEEEEEEE
T ss_pred -CCEEEEEcC
Confidence 898876543
No 51
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=22.74 E-value=1.1e+02 Score=25.63 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=45.6
Q ss_pred CceEEEeeeccCcCcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEeecc
Q 022660 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHSPFV 292 (294)
Q Consensus 229 ~grigi~ICyD~~fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~an~ 292 (294)
..++.++-||=...+++.+.+...|++-|+.-+. +...-+..|.. .-.+|.+.|+.||.+++
T Consensus 229 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~g~-G~Gnvp~~~~~-~l~~a~~~gi~VV~~Sq 290 (363)
T d1zq1a2 229 EEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGT-GLGHTPNDIIP-SIERAVEEGVAVCMTSQ 290 (363)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEB-TTTBCCGGGHH-HHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEecCCCCHHHHHHHHhCCCceEEEEee-cCCCCchHHHH-HHHHHHhCCceEEEecC
Confidence 3689999999999999999998999998887544 21111233433 34668899999998875
No 52
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=21.93 E-value=1.2e+02 Score=21.18 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=44.2
Q ss_pred ceEEEEEecccc----------ccHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHH
Q 022660 82 KFKVGLCQLSVT----------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTA 151 (294)
Q Consensus 82 ~~rValvQ~~v~----------~d~~~n~~~i~~~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~ 151 (294)
+..+.+++.... .+.+...+.+...++.+...+..+++.|=. +...........+. .+.+
T Consensus 72 ~~d~vii~~G~ND~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~------~~~~ 141 (201)
T d1vjga_ 72 YNSLVVFSFGLNDTTLENGKPRVSIAETIKNTREILTQAKKLYPVLMISPAP----YIEQQDPGRRRRTI------DLSQ 141 (201)
T ss_dssp SEEEEEEECCHHHHCEETTEESSCHHHHHHHHHHHHHHHHHHSCEEEECCCC----CCCTTCTTHHHHHH------HHHH
T ss_pred CCCEEEEECCCccccccccccCCCHHHHHHHHHHHHHHhhcccccceeeeec----cccccchhhHHHHH------HHHH
Confidence 346667776431 245667777888888887777777665421 11111111222222 4777
Q ss_pred HHHHHHHhcCcEEE
Q 022660 152 MLSEVARLLKITIV 165 (294)
Q Consensus 152 ~l~~lA~~~~i~Iv 165 (294)
.+.++|++.++.++
T Consensus 142 ~~~~~a~~~~~~~~ 155 (201)
T d1vjga_ 142 QLALVCQDLDVPYL 155 (201)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHHHhcCccee
Confidence 89999999988665
No 53
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=21.84 E-value=81 Score=24.70 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=43.8
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCcHHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEc
Q 022660 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (294)
Q Consensus 106 ~i~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (294)
.+..|....+++++|=|-.. |. |. ... ..+.+.+.+++++ |.+|++-++...+-..+.+.++++.
T Consensus 143 ~iA~al~~~p~illLDEPt~-gL---D~-~~~---------~~i~~~i~~~~~~-g~tii~~tH~l~~~~~~~drv~vl~ 207 (238)
T d1vpla_ 143 LIARALMVNPRLAILDEPTS-GL---DV-LNA---------REVRKILKQASQE-GLTILVSSHNMLEVEFLCDRIALIH 207 (238)
T ss_dssp HHHHHHTTCCSEEEEESTTT-TC---CH-HHH---------HHHHHHHHHHHHT-TCEEEEEECCHHHHTTTCSEEEEEE
T ss_pred HHHHHHhcCCCEEEecCCCC-CC---CH-HHH---------HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 34445677889999999642 21 11 000 1366677777766 6777765554444455666777775
Q ss_pred cCCcEEEE
Q 022660 186 SDGKLIAK 193 (294)
Q Consensus 186 ~~G~il~~ 193 (294)
+|+++..
T Consensus 208 -~G~iv~~ 214 (238)
T d1vpla_ 208 -NGTIVET 214 (238)
T ss_dssp -TTEEEEE
T ss_pred -CCEEEEE
Confidence 8988643
No 54
>d1wo8a1 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {Thermus thermophilus [TaxId: 274]}
Probab=21.42 E-value=95 Score=21.72 Aligned_cols=48 Identities=2% Similarity=-0.251 Sum_probs=30.9
Q ss_pred CcHHHHHHHHCCCeEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCeeEe
Q 022660 242 FQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQVLPHS 289 (294)
Q Consensus 242 fpe~~r~la~~Gadlil~ps~~~~~~~~~~~~~l~~~RAiEn~~~vv~ 289 (294)
.|++........+|+|++..+.+.......=....|--|++++++++.
T Consensus 61 ~~~i~d~I~~g~IdlVIn~~~~~~~~~~~~D~~~iRR~a~~~~IP~~T 108 (126)
T d1wo8a1 61 DLQIGARVAEGKVLAVVFLQDPLTAKPHEPDVQALMRVCNVHGVPLAT 108 (126)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEEC
T ss_pred CCCHHHHHHcCCccEEEEecCCCCCCcccccHHHHHHHHHHcCCCEEe
Confidence 367776666677999997665333322222234457789999998864
No 55
>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}
Probab=21.29 E-value=29 Score=24.24 Aligned_cols=49 Identities=8% Similarity=0.085 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeeeeeCCeeEEEEEEEccCCcEEEEEee
Q 022660 148 PSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRK 196 (294)
Q Consensus 148 ~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~il~~y~K 196 (294)
+.++.+.+..++.++.+.-+..........-.+.++.||+|..+..|-.
T Consensus 70 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~ 118 (132)
T d1kw3b1 70 AALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG 118 (132)
T ss_dssp HHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence 4567777777888998887632222111222456788999998877644
No 56
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.08 E-value=38 Score=24.52 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=13.9
Q ss_pred HHHHHHHHHHCCCcEEEcCCCC
Q 022660 103 ARRAIEEAAEKGAKLILLPEIW 124 (294)
Q Consensus 103 i~~~i~~A~~~gadLVVfPE~~ 124 (294)
..+.+.+.. +++|+|+|-|..
T Consensus 21 ~~~~l~~~i-~~~DIi~LQEv~ 41 (260)
T d2a40b1 21 LASYIVRIV-RRYDIVLIQEVR 41 (260)
T ss_dssp HHHHHHHHH-TTCSEEEEEEEC
T ss_pred HHHHHHHHc-CCCCEEEEEeee
Confidence 344444333 479999999974
Done!