BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022661
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/294 (71%), Positives = 243/294 (82%), Gaps = 10/294 (3%)
Query: 1 MGERLTPGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLL 60
M ER++PGS+FQYP SG ASP+RS P DRERYL ELL ERQKLGPF+QV+P C RLL
Sbjct: 11 MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70
Query: 61 SQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQ 120
+ EIRR++ SF D +R+EH SPFRSLGQP +DLEG S MQ EEN HLQR +PF+
Sbjct: 71 NHEIRRVS----SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFR 126
Query: 121 TPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECR 180
P +GW G+PG+P P+VK+VIRLDVPVDKYP+ +NFVGRILGPRGNSLKRVE T CR
Sbjct: 127 GPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPS-YNFVGRILGPRGNSLKRVELATHCR 185
Query: 181 VFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK 240
VFIRGRGSVKD++KEEKLK KPGYEHL EPLHVL+EAE PEDIINSRL+HAV LE+LLK
Sbjct: 186 VFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLK 245
Query: 241 PVDESLDHYKKQQLRELAMLNGTLREE--SPSMSPSMSPSMSPFNNAGMKRAKT 292
P+DES+DHYK++QL+ELA LNGTLREE SPS+SP +SPSMSPFN+ KRAKT
Sbjct: 246 PMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 289 bits (739), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/273 (58%), Positives = 193/273 (70%), Gaps = 13/273 (4%)
Query: 24 RSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITG--YNPSFVDHERFE 81
RS+ +D + YLAELLAE QKLGPF+QVLP+CS+LLSQEI R++ +N F D +R
Sbjct: 20 RSNPTDVDSQ-YLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHR 78
Query: 82 HDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKR 141
SP G S NG Q F SM WQG P P++ VVK+
Sbjct: 79 FRSPSPMSSPNPRSNRSGNGFSPW----NGLHQERLGFPQGTSMDWQGAPPSPSSHVVKK 134
Query: 142 VIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK 201
++RLDVPVD YPN FNFVGRILGPRGNSLKRVEA T CRVFIRG+GS+KD KE+KL+ K
Sbjct: 135 ILRLDVPVDSYPN-FNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGK 193
Query: 202 PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN 261
PGYEHL++PLH+L+EAEFP II++RL HA ++E LLKPVDES D YK+QQLRELAMLN
Sbjct: 194 PGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLN 253
Query: 262 GTLREESPSMSPSMSPSMSPFNNAGMKRAKTGR 294
TLRE+SP S+SPF+N GMKRAKTG+
Sbjct: 254 STLREDSPHPG-----SVSPFSNGGMKRAKTGQ 281
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 277 bits (708), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 196/296 (66%), Gaps = 28/296 (9%)
Query: 9 SYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRIT 68
+Y + PS + R+ S +D + Y+++LLAE QKLGPF+QVLP+CSRLL+QEI RIT
Sbjct: 6 NYNNFSPSRAASPQIRTPSSDVDSQ-YISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 64
Query: 69 GYNPS--FVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQT--------EENGHLQRMAP 118
G P+ F D +R H SP P P + +S E G MA
Sbjct: 65 GMMPNQGFTDFDRLRHRSP-----SPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA- 118
Query: 119 FQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTE 178
M WQG P P++ VKR++RLD+PVD YPN FNFVGR+LGPRGNSLKRVEA T
Sbjct: 119 ------MEWQGAPASPSSYPVKRILRLDLPVDTYPN-FNFVGRLLGPRGNSLKRVEATTG 171
Query: 179 CRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENL 238
CRV+IRG+GS+KD KEEKLK KPGYEHLNE LH+L+EA+ P DI++ +L A I+E L
Sbjct: 172 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 231
Query: 239 LKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNNAGMKRAKTGR 294
+KPVDES D+ K+QQLRELA+LN LRE SP S S+SPFN+ MKR KTGR
Sbjct: 232 VKPVDESQDYIKRQQLRELALLNSNLREN----SPGPSGSVSPFNSNAMKRPKTGR 283
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 274 bits (700), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 188/266 (70%), Gaps = 12/266 (4%)
Query: 27 SLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPF 86
S +++E+YL+ELLAER KL PF+ VLP RL++QEI R+T + + RF+H SP
Sbjct: 53 SFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENALSQSRFDHPSPL 112
Query: 87 RSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLD 146
S G D+ G ++ E + P+ W PG + +VKR IR+D
Sbjct: 113 ASGGIFQNSRADMNGWASQFPSERS-------VSSSPAPNWLNSPGSSSGLIVKRTIRVD 165
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+PVDKYPN +NFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKE+ ++ KPGYEH
Sbjct: 166 IPVDKYPN-YNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEH 224
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 266
LNEPLH+LVEAE P +I+++RL A IL++LL PV+E+ D YKKQQLRELA+LNG+LRE
Sbjct: 225 LNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLRE 284
Query: 267 ESPSMSPSMSPSMSPFNNAGMKRAKT 292
E SP MS S+SP+N+ GMKRAKT
Sbjct: 285 EG---SP-MSGSISPYNSLGMKRAKT 306
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 189/282 (67%), Gaps = 21/282 (7%)
Query: 20 ASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGY--NPSFVDH 77
ASP S+ +D +YL ELLAE QKL PF+QVLP+CSRLL+QE+ R++G N F D
Sbjct: 17 ASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDF 76
Query: 78 ERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEE-----NGHLQRMAPFQTPPSMGWQGIPG 132
+R H SP PM L + + NG Q +M WQG PG
Sbjct: 77 DRLRHRSP---------SPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPG 127
Query: 133 IPTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDS 192
P++ VKR++RL++PVD YPN FNFVGR+LGPRGNSLKRVEA T CRVFIRG+GS+KD
Sbjct: 128 SPSSYTVKRILRLEIPVDNYPN-FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDP 186
Query: 193 IKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQ 252
KE+KL+ +PGYEHLNE LH+L+EA+ P I+ RL A I+E LLKPVDES D K+Q
Sbjct: 187 EKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQ 246
Query: 253 QLRELAMLN-GTLREESPSMSPSMSPSMSPFNNAGMKRAKTG 293
QLRELA+LN LREESP PS S+SPFN++G KR KTG
Sbjct: 247 QLRELALLNSNNLREESP--GPSGGGSVSPFNSSG-KRPKTG 285
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 270 bits (690), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 157/296 (53%), Positives = 198/296 (66%), Gaps = 21/296 (7%)
Query: 5 LTPGSYFQYPPSGVHASPHRS------SSLPLDRERYLAELLAERQKLGPFVQVLPLCSR 58
+T S PPS SP+ S SS+ +++E+YL+ELLAER KL PF+ VLP R
Sbjct: 30 MTYSSSLSVPPSAPQ-SPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFR 88
Query: 59 LLSQEIRRITGY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRM 116
LL+QEI R+T N + + +H SP S G D+ G ++ E R
Sbjct: 89 LLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSE-----RS 143
Query: 117 APFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAM 176
P + P W PG + + KR IR+D+PVD YPN FNFVGR+LGPRGNSLKRVEA
Sbjct: 144 VP--SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPN-FNFVGRLLGPRGNSLKRVEAS 200
Query: 177 TECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILE 236
T+CRV IRGRGS+KD IKEE ++ KPGYEHLNEPLH+LVEAE P +I+++RL A IL+
Sbjct: 201 TDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 260
Query: 237 NLLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNNAGMKRAKT 292
+LL P++E+ D YKKQQLRELA+LNGTLREE SP MS S+SP+N+ GMKRAKT
Sbjct: 261 DLLTPMEETHDMYKKQQLRELALLNGTLREEG---SP-MSGSVSPYNSLGMKRAKT 312
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 79 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 137
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 138 QNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 197
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 198 LAILNGTYRDANLKSPALAFSLAAT 222
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 79 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 137
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 138 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 197
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 198 LAILNGTYRDANLKSPALAFSLAAT 222
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+V+ +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIVQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 99/145 (68%), Gaps = 4/145 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P+ + +L VPV +YP+ FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE
Sbjct: 78 PIAQLQEKLYVPVKEYPD-FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEE 136
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
+ + KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL E
Sbjct: 137 QNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLME 196
Query: 257 LAMLNGTLRE---ESPSMSPSMSPS 278
LA+LNGT R+ +SP+++ S++ +
Sbjct: 197 LAILNGTYRDANIKSPALAFSLAAT 221
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 123/250 (49%), Gaps = 48/250 (19%)
Query: 19 HASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHE 78
H +P + YLA+LL +R++L F V RLL +EI R+
Sbjct: 62 HLTPQQQQQSTQSIADYLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRA--------- 112
Query: 79 RFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPV 138
SL Q NG + P P P V
Sbjct: 113 ---------SLFQING-------------------VKKEPLTLPE----------PEGSV 134
Query: 139 VKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKL 198
V ++ VPV ++P+ FNFVGRILGPRG + K++E T C++ +RG+GS++D KE+
Sbjct: 135 VTMNEKVYVPVREHPD-FNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDAN 193
Query: 199 KDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELA 258
+ KP +EHL++ LHVL+ E E+ +L AVA ++ LL P E D KK+QL ELA
Sbjct: 194 RGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELA 253
Query: 259 MLNGTLREES 268
++NGT R+ +
Sbjct: 254 IINGTYRDTT 263
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 4/145 (2%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSI 193
P P+V +L VPV +YP+ +NFVGRILGPRG + K++EA T C++ +RGR S++D
Sbjct: 75 PVGPIVHLQEKLFVPVKEYPD-YNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKK 133
Query: 194 KEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQ 253
KEE+ + KP +EHLNE LHVL+ E + ++ AV ++ LL P E D+ KK Q
Sbjct: 134 KEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQ 193
Query: 254 LRELAMLNGTLRE---ESPSMSPSM 275
L ELA+LNGT R+ ++P+++ S+
Sbjct: 194 LMELAILNGTYRDTNIKAPTLAFSL 218
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG 203
++ VP ++YP+ +NFVGRILGPRG + K++E T C++ +RG+GS++D KE + K
Sbjct: 208 KIYVPKNEYPD-YNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKAN 266
Query: 204 YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
+EHL + LHVLV+ E E+ ++ +L A+ ++ LL P E D K++QL ELA++NGT
Sbjct: 267 WEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGT 326
Query: 264 LR 265
R
Sbjct: 327 YR 328
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 59/237 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+GR D EE +L + + +K R+ +P
Sbjct: 38 ---SDGRKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEH 206
V +YP +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y H
Sbjct: 68 VKQYP-KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAH 126
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
L++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 127 LSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 121/237 (51%), Gaps = 59/237 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
++ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+G+ D EE +L + + +K R+ +P
Sbjct: 38 ---SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEH 206
V +YP +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y H
Sbjct: 68 VKQYP-KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAH 126
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
L++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 127 LSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 59/237 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+G+ D EE +L + + +K R+ +P
Sbjct: 38 ---SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEH 206
V +YP +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y H
Sbjct: 68 VKQYP-KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAH 126
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
L++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 127 LSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 59/237 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
++ E+YL EL+AE+ L P FV + RLL +EI + F D E + D +
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVHAM----RLLDEEIVK-------FQDSEGNKEDGEKKY 49
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
L I + +K R+ +P
Sbjct: 50 LD------------------------------------------IISNKNIKLSERVLIP 67
Query: 149 VDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEH 206
V +YP +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D IKEE+L+ D+ + H
Sbjct: 68 VKQYP-KFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAH 126
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
L++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 127 LSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 59/237 (24%)
Query: 30 LDRERYLAELLAERQKL-GPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+D+++YL EL+AE++ L FV + RLL++EI E+FE D
Sbjct: 1 MDQDKYLPELVAEKESLDASFVHAM----RLLAEEI-------------EKFEGD----- 38
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+ ++G +++ I + +K R+ +P
Sbjct: 39 -----------------ELRKDGEVKKYLD--------------IISNKNIKLSERVLIP 67
Query: 149 VDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEH 206
V +YP +FNFVG++LGPRGNS+KR++ T ++ I G+GS++D KEE+L+ + Y H
Sbjct: 68 VQQYP-KFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAH 126
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 263
L+ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 127 LSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+P++ YP + NFVG +LGPRGN+LK+++ + C++ IRGRGSVK+ L G +
Sbjct: 155 IPINDYP-EINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDLPK--GAMN 211
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 266
+NEPLH ++ A+ E I I++ + P E + K+ QLRELA+LNGTLRE
Sbjct: 212 MNEPLHCVISADTEEKIPLGINAVESIIIKAITSP--EGQNDLKRGQLRELAVLNGTLRE 269
Query: 267 ES 268
++
Sbjct: 270 DN 271
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 7/119 (5%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG--- 203
+PV ++P +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ K G
Sbjct: 62 IPVKQFP-KFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELR-KSGEAK 119
Query: 204 YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 262
Y HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 120 YFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGY 204
+PV ++P +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y
Sbjct: 62 IPVKQFP-KFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKY 120
Query: 205 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 262
HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGY 204
+PV ++P +FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y
Sbjct: 62 IPVKQFP-KFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKY 120
Query: 205 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 262
HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 121 FHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 84/130 (64%), Gaps = 12/130 (9%)
Query: 137 PVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEE 196
P K+ ++ +P+ +P ++NF+G I+GPRGN+ KR+E + ++ IRG+GS +D K
Sbjct: 175 PNEKKTRKIYIPIKNHP-EYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRDG-KPT 232
Query: 197 KLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRE 256
KL+ + N+ LHVL+ A D ++ +LD A ++ L PV+E + +K+QQLRE
Sbjct: 233 KLQFQE-----NDELHVLLTA----DTVD-QLDKAEVLVREFLIPVEEGKNEHKRQQLRE 282
Query: 257 LAMLNGTLRE 266
LA +NGTLRE
Sbjct: 283 LAEMNGTLRE 292
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 61/246 (24%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 FEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVV 139
+ +DL M+ +E
Sbjct: 145 Y----------------LDLFSHKNMKLKE------------------------------ 158
Query: 140 KRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 199
R+ +PV +YP +FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 159 ----RVLIPVKQYP-KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELR 213
Query: 200 D--KPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 257
P Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL
Sbjct: 214 KGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLEL 271
Query: 258 AMLNGT 263
+ LNG
Sbjct: 272 SYLNGV 277
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 11/125 (8%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+PVD+YP+ NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG +
Sbjct: 154 IPVDQYPD-VNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMN 210
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENL-LKPVD--ESLDHYKKQQLRELAMLNGT 263
+PLH L+ A+ ED ++ + + +N+ +K V E + K+ QLRELA LNGT
Sbjct: 211 FEDPLHCLIIADS-ED----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGT 265
Query: 264 LREES 268
LRE++
Sbjct: 266 LREDN 270
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--K 201
R+ +PV +YP +FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 159 RVLIPVKQYP-KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGD 217
Query: 202 PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN 261
P Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LN
Sbjct: 218 PKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
Query: 262 GT 263
G
Sbjct: 276 GV 277
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--K 201
R+ +PV +YP +FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 159 RVLIPVKQYP-KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGD 217
Query: 202 PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN 261
P Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LN
Sbjct: 218 PKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
Query: 262 GT 263
G
Sbjct: 276 GV 277
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+PV +YP Q NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG
Sbjct: 140 IPVSQYP-QINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMD 196
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 266
++PLH L+ A+ E I N +++ + P E + K+ QLRELA LNGTLRE
Sbjct: 197 FSDPLHCLIIADNEEKIENGIKACRNIVIKAVTSP--EGQNELKRGQLRELAELNGTLRE 254
Query: 267 ES 268
++
Sbjct: 255 DN 256
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--K 201
R+ +PV +YP +FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 142 RVLIPVKQYP-KFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGD 200
Query: 202 PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN 261
P Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LN
Sbjct: 201 PKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 258
Query: 262 GT 263
G
Sbjct: 259 GV 260
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 14/137 (10%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSI 193
P T V +V+ +P D+YP + NFVG ++GPRGN+LK +E ++ IRG+GSVK+
Sbjct: 132 PATRVSDKVM---IPQDEYP-EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG- 186
Query: 194 KEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYK 250
+ KD +EPLH LV A E++ AV + N+LK E + +
Sbjct: 187 -KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLR 240
Query: 251 KQQLRELAMLNGTLREE 267
K QLRELA LNGTLRE+
Sbjct: 241 KMQLRELARLNGTLRED 257
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 14/137 (10%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSI 193
P T V +V+ +P D+YP + NFVG ++GPRGN+LK +E ++ IRG+GSVK+
Sbjct: 132 PATRVSDKVM---IPQDEYP-EINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG- 186
Query: 194 KEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYK 250
+ KD +EPLH LV A E++ AV + N+LK E + +
Sbjct: 187 -KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLR 240
Query: 251 KQQLRELAMLNGTLREE 267
K QLRELA LNGTLRE+
Sbjct: 241 KMQLRELARLNGTLRED 257
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 14/128 (10%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG 203
++ VPV YP + NF+G ++GPRG++LK +EA + ++ IRG+GSV KE K + P
Sbjct: 189 KVYVPVKDYP-EINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEGKGRSDPS 243
Query: 204 YE-HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAM 259
++ E LH LV A+ ED IN HA+ +++N+++ V E + K+ QLR+LA
Sbjct: 244 VRGNMEEDLHCLVTADS-EDKIN----HAIKLIDNVIQTAASVPEGQNDLKRNQLRQLAT 298
Query: 260 LNGTLREE 267
LNGTLR++
Sbjct: 299 LNGTLRDD 306
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 142 VIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDK 201
V RL VPV YP+ NFVG ++GPRGN+LK+++ + R+ IRG+GSVK+ +
Sbjct: 149 VERLYVPVKDYPD-INFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGSS 207
Query: 202 PGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELA 258
+ + LHVL+ A+ P ++ AV ++ ++ + + ++ K+ QL+ELA
Sbjct: 208 QTGTDIQDDLHVLITADSP-----LKISKAVKLVNEIIDKLIFSPQGMNFMKRDQLKELA 262
Query: 259 MLNGTLREESP 269
+LNGTLRE P
Sbjct: 263 VLNGTLRETKP 273
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 12/124 (9%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
VPV+ YP + NF+G ++GPRGN+LK++EA + ++ IRG+GSVK+ + D +
Sbjct: 187 VPVNDYP-EINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEG---KGRSDAAHASN 242
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAMLNGT 263
E LH L+ A+ E +++ A ++ N+++ + E + K+ QLRELA LNGT
Sbjct: 243 QEEDLHCLIMADTEE-----KVNKAKKLVHNVIETAASIPEGQNELKRNQLRELAALNGT 297
Query: 264 LREE 267
LR++
Sbjct: 298 LRDD 301
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 12/124 (9%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
VPV+ YP + NF+G ++GPRGN+LK++E + ++ IRG+GSVK+ + D +
Sbjct: 202 VPVNDYP-EINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG---KGRSDAAHSSN 257
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAMLNGT 263
E LH L+ A+ E +++ A ++ N+++ + E + K+ QLRELA LNGT
Sbjct: 258 QEEDLHCLIMADTEE-----KVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGT 312
Query: 264 LREE 267
LR++
Sbjct: 313 LRDD 316
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+PV++YP+ NF+G++LG RG +LK++E + ++ IRGRGSVK + + D P
Sbjct: 185 IPVNEYPD-INFIGQLLGARGKTLKKMEQESGAKICIRGRGSVK---QGKGRTDIPFQST 240
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 266
+ LH L+ +E E I +R V + + V E + K+ QLRELA LNGTLR+
Sbjct: 241 AEDDLHCLIISEDEEKI--ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRD 298
Query: 267 E 267
+
Sbjct: 299 D 299
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 17/144 (11%)
Query: 139 VKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKL 198
VK ++ +PV YP+ NFVG +LGPRGN+L++++ + R+ IRG+GSVKD
Sbjct: 160 VKTYEKIYIPVKDYPD-INFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSN 218
Query: 199 KDKPGYEHL------------NEPLHVLVEAEFPEDIINS-RLDHAVAILENLLKPVDES 245
D N+ LHV++ ++ I + +L + V I + + PV +
Sbjct: 219 NDDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKAIKLTNQV-IEKAISSPVGQ- 276
Query: 246 LDHYKKQQLRELAMLNGTLREESP 269
+ K+ QLRELA+LNGTLRE P
Sbjct: 277 -NDLKRGQLRELAILNGTLRETKP 299
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 112 HLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNQFNFVGRILGPRGNSLK 171
H++ + +T P+ G + VK V R +PVD++P ++NF+G++LGP G+++K
Sbjct: 45 HIKTGSRPKTVPNTDGSGFMDLYNDTKVKLVSRCCLPVDQFP-KYNFLGKLLGPGGSTMK 103
Query: 172 RVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG--YEHLNEPLHVLVEAEFPEDIINSRLD 229
+++ T ++ I GRGS++D KEE+L++ Y HLNE LH+ + + ++R+
Sbjct: 104 QLQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAEAHARMA 163
Query: 230 HAVAILENLLKPVDE 244
+A+ ++ + P ++
Sbjct: 164 YALTEIKKYITPEED 178
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 17/126 (13%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY-- 204
+PV ++P + NF G ++GPRGNSLK++E + ++ IRG+GSVK+ K + G
Sbjct: 252 IPVKEFP-EINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFP 304
Query: 205 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELAMLN 261
+ + LH L+ A+ S++ VA++ +++ E + +K+ QLRELA LN
Sbjct: 305 QDEEDELHCLITAD-----DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLN 359
Query: 262 GTLREE 267
GTLR++
Sbjct: 360 GTLRDD 365
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 17/126 (13%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY-- 204
+PV ++P + NF G ++GPRGNSLK++E + ++ IRG+GSVK+ K + G
Sbjct: 252 IPVKEFP-EINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFP 304
Query: 205 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELAMLN 261
+ + LH L+ A+ S++ VA++ +++ E + +K+ QLRELA LN
Sbjct: 305 QDEEDELHCLITAD-----DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLN 359
Query: 262 GTLREE 267
GTLR++
Sbjct: 360 GTLRDD 365
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 147 VPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEH 206
+P+ ++P + F G ++GPRGN+LK +E + ++ IRG+GSVK K K +
Sbjct: 254 LPIKEFP-EIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKTG------KGKMDADE 306
Query: 207 LNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 266
E +H +V A+ E + + ++E + DH K+ QLRELA LNGTLR+
Sbjct: 307 DEEEMHCVVTAD-DEASVKKCIKLINQVIETAASTPEGENDH-KRNQLRELAALNGTLRD 364
Query: 267 E 267
+
Sbjct: 365 D 365
>sp|Q6NZ18|K0907_DANRE UPF0469 protein KIAA0907 homolog OS=Danio rerio PE=2 SV=1
Length = 570
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 144 RLDVPVDKYPNQFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPG 203
++ V +D+ FN R+ GP + L+ ++A T +VF+RG+GS L+ G
Sbjct: 209 KVFVGLDQALQGFNVKERVEGPSCSFLQHIQAETGAKVFLRGKGS-------GCLEPASG 261
Query: 204 YEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQ 252
E EP+++ + PE + +++ + ENLL+ V Y Q
Sbjct: 262 REAF-EPMYIYISHPKPEGLASAK-----TLCENLLQTVHAEYSRYLNQ 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,606,282
Number of Sequences: 539616
Number of extensions: 5253752
Number of successful extensions: 14860
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 14638
Number of HSP's gapped (non-prelim): 196
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)