BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022662
MAAEEDVDLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIKDSEEDAKKELE
VLWRRVKTTATLLTYLKSKARIMAVPDLAHTSCGIRQLEGVGLVDKNGTPLSGWSRNVDL
SSFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRVIMAESETAVE
KEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLVEETSRQRQRA
AENEQELCRVKRDFESLKNYVSSLISVRETLLSSEKQFQTIERLFERPSADPFC

High Scoring Gene Products

Symbol, full name Information P value
AT2G17990 protein from Arabidopsis thaliana 3.1e-76
KIF20B
Uncharacterized protein
protein from Sus scrofa 0.00043
LOC100737032
Uncharacterized protein
protein from Sus scrofa 0.00080
MYH2
Myosin-2
protein from Sus scrofa 0.00099
MYH2
Myosin-2
protein from Sus scrofa 0.00099

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022662
        (294 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060944 - symbol:AT2G17990 species:3702 "Arabi...   768  3.1e-76   1
UNIPROTKB|F1SCX7 - symbol:KIF20B "Uncharacterized protein...   123  0.00043   1
UNIPROTKB|F1SS65 - symbol:LOC100737032 "Uncharacterized p...   120  0.00080   1
UNIPROTKB|F1SS64 - symbol:MYH2 "Myosin-2" species:9823 "S...   120  0.00099   1
UNIPROTKB|Q9TV63 - symbol:MYH2 "Myosin-2" species:9823 "S...   120  0.00099   1


>TAIR|locus:2060944 [details] [associations]
            symbol:AT2G17990 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] EMBL:CP002685
            EMBL:AC006201 EMBL:BT014983 EMBL:BT020251 IPI:IPI00516416
            PIR:H84558 RefSeq:NP_179390.1 UniGene:At.27533
            EnsemblPlants:AT2G17990.1 GeneID:816311 KEGG:ath:AT2G17990
            TAIR:At2g17990 HOGENOM:HOG000242078 InParanoid:Q9SL47 OMA:MERFAYG
            PhylomeDB:Q9SL47 ProtClustDB:CLSN2683923 ArrayExpress:Q9SL47
            Genevestigator:Q9SL47 Uniprot:Q9SL47
        Length = 338

 Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
 Identities = 163/293 (55%), Positives = 224/293 (76%)

Query:     1 MAAEEDVDLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIK-DSEEDAKKEL 59
             MA +E+ D+S+  S   E  EIW+ E+E  +FQVD L+ +L++VK  ++  SEEDA+KEL
Sbjct:     1 MAGKEETDVSAQGSLTREATEIWRSELESRRFQVDSLEAELVDVKAYLEFGSEEDARKEL 60

Query:    60 EVLWRRVKTTATLLTYLKSKARIMAVPD-LAHTSCGIRQLE---GVGLVDKNG-TPLSGW 114
              VL  RV++TAT+L YL+SKAR++A+PD LA+ SCG+ Q+E   G+ LV+K+G +  S  
Sbjct:    61 GVLSGRVRSTATMLRYLRSKARVLAIPDDLANVSCGVEQIEELKGLNLVEKDGGSSSSDG 120

Query:   115 SRNVDLSSFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRVIMAE 174
             +RN +      P+   + G    LG    +DGAY  E+L+S++MVTDV++ LV+RV +AE
Sbjct:   121 ARNTN------PETRRYSG---SLGV---EDGAYTNEMLQSIEMVTDVLDSLVRRVTVAE 168

Query:   175 SETAVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLVEETS 234
             SE+AV+KE+  LG+EEI +K  QIEN+S+KLEEMERFA GTN +LNEMR+R+E+LVEET 
Sbjct:   169 SESAVQKERALLGEEEISRKTIQIENLSVKLEEMERFAYGTNSVLNEMRERIEELVEETM 228

Query:   235 RQRQRAAENEQELCRVKRDFESLKNYVSSLISVRETLLSSEKQFQTIERLFER 287
             RQR++A ENE+ELCRVKR+FESLK+YVS+  +VRETLLSSE+QF+TIE LFER
Sbjct:   229 RQREKAVENEEELCRVKREFESLKSYVSTFTNVRETLLSSERQFKTIEELFER 281


>UNIPROTKB|F1SCX7 [details] [associations]
            symbol:KIF20B "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0050699 "WW domain binding" evidence=IEA] [GO:0016887
            "ATPase activity" evidence=IEA] [GO:0005813 "centrosome"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
            "microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
            associated complex" evidence=IEA] [GO:0003777 "microtubule motor
            activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
            Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
            SMART:SM00129 GO:GO:0005524 GO:GO:0005813 GO:GO:0005875
            GO:GO:0005654 GO:GO:0005730 GO:GO:0016887 GO:GO:0005874
            GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
            GeneTree:ENSGT00530000063172 OMA:KLGIKHQ EMBL:AEMK01189758
            EMBL:CT955956 EMBL:CU407054 Ensembl:ENSSSCT00000011443
            Uniprot:F1SCX7
        Length = 1828

 Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
 Identities = 66/300 (22%), Positives = 127/300 (42%)

Query:     5 EDVDLSSLKSQIIETH-EIWKQEMERSQFQVDVLQ-----EKLMEVKTCIKDSEEDAKKE 58
             E  + + L  QI+    E+   E +   F ++V Q     E  +      +   E+ ++ 
Sbjct:   906 EKEEKAELNKQIVSLQQELSSSEKKSLNFSIEVQQIQSNYENAISELKLQRGINEEQEER 965

Query:    59 LEVLWRRVKTTATLLTYLKSKARIM-AVPDLAHTSCGIRQLEGVGLVDKNGTPLSGWSRN 117
             +  L + ++TT   +T   S+ ++M A  D   T   + Q+  + L++  G        N
Sbjct:   966 IMKLSKEIETTRRNITNNVSQIKLMQAKIDELRTLDSVSQISNIDLLNLRGFSSGSQEDN 1025

Query:   118 VDLSSFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRVIMAESET 177
             +  +  +  D D ++ ISKQ+     Q+ +       +V+ + +  + +VK       + 
Sbjct:  1026 LPNTQLHLLDND-YL-ISKQVKEHGIQELSRESSFRCTVEAIWEECKEIVKTSSKKSHQI 1083

Query:   178 AVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNE----MRQRVEDLVEET 233
                KE++   Q E++   +  EN  LK EE E       G+L E    ++Q  E+L E+T
Sbjct:  1084 EELKEQIEKLQAEVKHYKD--ENNRLKTEEREN--KNQEGLLKEKESLIQQLKEELQEKT 1139

Query:   234 SR---QRQRAAENEQELCRVKRDFESLKNYVSSLISVRETLLSS-EKQFQTIERLFERPS 289
                  Q Q   E ++ L  + +D  S K  +  L ++ ET      +  Q  + + E+ S
Sbjct:  1140 VNLDVQVQHVVEGKRVLSELTQDVTSYKVKIQELEALLETQKEKCSRSAQLEQEILEKES 1199


>UNIPROTKB|F1SS65 [details] [associations]
            symbol:LOC100737032 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003774 "motor activity"
            evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
            InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
            PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
            GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
            PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790 EMBL:CU896583
            Ensembl:ENSSSCT00000019596 ArrayExpress:F1SS65 Uniprot:F1SS65
        Length = 1603

 Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
 Identities = 67/293 (22%), Positives = 124/293 (42%)

Query:     3 AEEDVDLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIKDSEEDAKKELEVL 62
             AEE  D   +K++I    +I K+  ER++ + ++  E L   K  ++D   + KK+++ L
Sbjct:   569 AEERCD-QLIKTKIQLEAKI-KEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDDL 625

Query:    63 WRRVKTTATLLTYLKSK-ARIMAVPDLAHTSCGIRQLEGVGLVDKNGTPLSGWSRNVDLS 121
                     TL    K K A    V +L     G+   E +  + K    L   +    L 
Sbjct:   626 ------ELTLAKVEKEKHATENKVKNLTEEMAGLD--ETIAKLTKEKKALQE-AHQQTLD 676

Query:   122 SFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRV----IMAESET 177
                  +ED    ++K     ++Q     G L +  ++  D+     K      +  ES  
Sbjct:   677 DLQA-EEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 735

Query:   178 AVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLVEETSRQR 237
              +E EK  L  E+++KK  +I N+  K+E+ +  A+     + E++ R+E+L EE   +R
Sbjct:   736 DIENEKQQL-DEKLKKKEFEISNLQSKIEDEQALAIQLQKKIKELQARIEELEEEIEAER 794

Query:   238 QRAAENEQELCRVKRDFESLKNYVSSLISVRETLLSSEK----QFQTIERLFE 286
                A+ E++   + R+ E +   +          +   K    +FQ + R  E
Sbjct:   795 ASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLE 847


>UNIPROTKB|F1SS64 [details] [associations]
            symbol:MYH2 "Myosin-2" species:9823 "Sus scrofa"
            [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
            [GO:0003774 "motor activity" evidence=IEA] InterPro:IPR000048
            InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
            Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
            PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
            GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
            PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790 OMA:QITSNRK
            EMBL:CU856557 Ensembl:ENSSSCT00000019597 ArrayExpress:F1SS64
            Uniprot:F1SS64
        Length = 1939

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 67/293 (22%), Positives = 124/293 (42%)

Query:     3 AEEDVDLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIKDSEEDAKKELEVL 62
             AEE  D   +K++I    +I K+  ER++ + ++  E L   K  ++D   + KK+++ L
Sbjct:   905 AEERCD-QLIKTKIQLEAKI-KEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDDL 961

Query:    63 WRRVKTTATLLTYLKSK-ARIMAVPDLAHTSCGIRQLEGVGLVDKNGTPLSGWSRNVDLS 121
                     TL    K K A    V +L     G+   E +  + K    L   +    L 
Sbjct:   962 ------ELTLAKVEKEKHATENKVKNLTEEMAGLD--ETIAKLTKEKKALQE-AHQQTLD 1012

Query:   122 SFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRV----IMAESET 177
                  +ED    ++K     ++Q     G L +  ++  D+     K      +  ES  
Sbjct:  1013 DLQA-EEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 1071

Query:   178 AVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLVEETSRQR 237
              +E EK  L  E+++KK  +I N+  K+E+ +  A+     + E++ R+E+L EE   +R
Sbjct:  1072 DIENEKQQL-DEKLKKKEFEISNLQSKIEDEQALAIQLQKKIKELQARIEELEEEIEAER 1130

Query:   238 QRAAENEQELCRVKRDFESLKNYVSSLISVRETLLSSEK----QFQTIERLFE 286
                A+ E++   + R+ E +   +          +   K    +FQ + R  E
Sbjct:  1131 ASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLE 1183


>UNIPROTKB|Q9TV63 [details] [associations]
            symbol:MYH2 "Myosin-2" species:9823 "Sus scrofa"
            [GO:0030016 "myofibril" evidence=IEA] [GO:0032982 "myosin filament"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005516
            "calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
            evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
            InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
            InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
            PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
            GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 GO:GO:0032982
            HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
            PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 HSSP:P13538 CTD:4620
            EMBL:AB025260 RefSeq:NP_999301.1 UniGene:Ssc.84856
            ProteinModelPortal:Q9TV63 SMR:Q9TV63 PRIDE:Q9TV63 GeneID:397256
            KEGG:ssc:397256 Uniprot:Q9TV63
        Length = 1939

 Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
 Identities = 67/293 (22%), Positives = 124/293 (42%)

Query:     3 AEEDVDLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIKDSEEDAKKELEVL 62
             AEE  D   +K++I    +I K+  ER++ + ++  E L   K  ++D   + KK+++ L
Sbjct:   905 AEERCD-QLIKTKIQLEAKI-KEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDDL 961

Query:    63 WRRVKTTATLLTYLKSK-ARIMAVPDLAHTSCGIRQLEGVGLVDKNGTPLSGWSRNVDLS 121
                     TL    K K A    V +L     G+   E +  + K    L   +    L 
Sbjct:   962 ------ELTLAKVEKEKHATENKVKNLTEEMAGLD--ETIAKLTKEKKALQE-AHQQTLD 1012

Query:   122 SFNGPDEDTWIGISKQLGSSDEQDGAYIGELLKSVQMVTDVMEVLVKRV----IMAESET 177
                  +ED    ++K     ++Q     G L +  ++  D+     K      +  ES  
Sbjct:  1013 DLQA-EEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 1071

Query:   178 AVEKEKVTLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLVEETSRQR 237
              +E EK  L  E+++KK  +I N+  K+E+ +  A+     + E++ R+E+L EE   +R
Sbjct:  1072 DIENEKQQL-DEKLKKKEFEISNLQSKIEDEQALAIQLQKKIKELQARIEELEEEIEAER 1130

Query:   238 QRAAENEQELCRVKRDFESLKNYVSSLISVRETLLSSEK----QFQTIERLFE 286
                A+ E++   + R+ E +   +          +   K    +FQ + R  E
Sbjct:  1131 ASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLE 1183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.128   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      294       294   0.00091  115 3  11 23  0.44    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  186 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.77u 0.15s 37.92t   Elapsed:  00:00:02
  Total cpu time:  37.77u 0.15s 37.92t   Elapsed:  00:00:02
  Start:  Fri May 10 10:44:16 2013   End:  Fri May 10 10:44:18 2013

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