Query 022662
Match_columns 294
No_of_seqs 19 out of 21
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 09:05:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022662.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022662hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1de4c1 a.48.2.1 (C:609-756) T 48.5 19 0.0014 27.4 6.3 61 102-167 76-138 (148)
2 d1seta1 a.2.7.1 (A:1-110) Sery 35.9 64 0.0047 22.4 8.6 75 15-93 29-109 (110)
3 d1oaoc_ e.26.1.3 (C:) Bifuncti 34.7 5.4 0.00039 38.6 1.0 25 83-107 585-617 (729)
4 d1yvia1 a.24.10.2 (A:2-143) Hi 26.4 75 0.0055 22.8 6.2 33 247-279 109-141 (142)
5 d3bi1a1 a.48.2.1 (A:594-750) G 25.6 24 0.0017 26.0 3.1 66 102-167 81-150 (157)
6 d1lvfa_ a.47.2.1 (A:) Syntaxin 22.3 1.2E+02 0.0089 21.2 7.6 60 147-210 42-101 (106)
7 d1oe8a1 a.45.1.1 (A:85-207) Cl 20.8 31 0.0022 23.7 2.8 24 57-80 99-123 (123)
8 d1i5pa3 f.1.3.1 (A:1-263) delt 19.9 83 0.006 25.6 5.8 67 214-288 85-160 (263)
9 d1wa8a1 a.25.3.1 (A:1-99) ESAT 19.8 64 0.0046 21.4 4.2 36 185-230 4-39 (99)
10 d1quua2 a.7.1.1 (A:125-248) al 19.5 1.2E+02 0.0084 20.3 5.7 63 8-71 36-108 (124)
No 1
>d1de4c1 a.48.2.1 (C:609-756) Transferrin receptor ectodomain, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.50 E-value=19 Score=27.40 Aligned_cols=61 Identities=11% Similarity=0.060 Sum_probs=42.7
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCCcchhhhhhhcc--CCCcccchhhHHHHHHHHHHHHHHHHHHH
Q 022662 102 GLVDKNGTPLSGWSRNVDLSSFNGPDEDTWIGISKQL--GSSDEQDGAYIGELLKSVQMVTDVMEVLV 167 (294)
Q Consensus 102 G~vDk~G~pls~Wsk~~d~ss~~~~d~~~~~~~~~~~--g~~~~~d~~Yv~e~LksV~mVtdvMEsLv 167 (294)
+|+|.+|.|=-.|-|++=. +|+..+.+|+...- +..+. ......++-+.+..||-.+.+-.
T Consensus 76 ~fl~~~glp~r~~~rHvi~----~p~~~~fPgi~dai~~~~~~~-~~~~~~~v~~qls~~t~~i~~Aa 138 (148)
T d1de4c1 76 HFLSPYVSPKESPFRHVFW----GSGSHTLPALLENLKLRKQNN-GAFNETLFRNQLALATWTIQGAA 138 (148)
T ss_dssp TTBCTTSCTTTCCCCBTTT----SCSTTSHHHHHHHHHHTSSCS-SCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCccCCCCCCccceeee----CCCCCCCccHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999855 66666788877621 11111 12336677788888888777654
No 2
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=35.90 E-value=64 Score=22.40 Aligned_cols=75 Identities=13% Similarity=0.122 Sum_probs=39.2
Q ss_pred hhhhhhHHHHHHHHhhhhhHHHHHHHHHhhhhhh-hcChHH---HHHHHHHHHHHHHhHHHHHHHHhhh--hhhhccCCc
Q 022662 15 QIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCI-KDSEED---AKKELEVLWRRVKTTATLLTYLKSK--ARIMAVPDL 88 (294)
Q Consensus 15 ~~~~~~~~Wk~eme~~qsQVdvLq~rl~evKa~~-~gSeed---a~KELevL~rRVKT~atLLtYLKSK--ARiMAvP~L 88 (294)
.+..-+..|++ .+.+++.|+++-..+=..| ++..++ ..++...|-..++....-+.=+.++ .-.+.||-+
T Consensus 29 ~i~~ld~~rr~----l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ll~iPNi 104 (110)
T d1seta1 29 ALLALDREVQE----LKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLP 104 (110)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 44455556654 4566777777765543333 233222 2333344444444444333333332 346789999
Q ss_pred ccccc
Q 022662 89 AHTSC 93 (294)
Q Consensus 89 AhtSc 93 (294)
.|.||
T Consensus 105 ~~~~V 109 (110)
T d1seta1 105 PWPGA 109 (110)
T ss_dssp CCTTS
T ss_pred CCccC
Confidence 99885
No 3
>d1oaoc_ e.26.1.3 (C:) Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit {Moorella thermoacetica [TaxId: 1525]}
Probab=34.69 E-value=5.4 Score=38.61 Aligned_cols=25 Identities=20% Similarity=0.510 Sum_probs=20.9
Q ss_pred hccCCccccccc--------cccccccccccCC
Q 022662 83 MAVPDLAHTSCG--------IRQLEGVGLVDKN 107 (294)
Q Consensus 83 MAvP~LAhtScG--------Ik~legVG~vDk~ 107 (294)
-.+=+.+||||| |-..+|+|.|+++
T Consensus 585 yS~~~~PmTSCGCFE~I~~~iPe~nGi~iV~Re 617 (729)
T d1oaoc_ 585 YTLMENPMTSCGCFEAIMAILPECNGIMITTRD 617 (729)
T ss_dssp TCSSSSCCCCCSCCSEEEEEEGGGTEEEEEETT
T ss_pred EEecCCCCcCchhhhhhhhhcccCceEEEEecC
Confidence 345567899999 6789999999997
No 4
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=26.43 E-value=75 Score=22.84 Aligned_cols=33 Identities=21% Similarity=0.132 Sum_probs=22.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHhhhhHhHH
Q 022662 247 LCRVKRDFESLKNYVSSLISVRETLLSSEKQFQ 279 (294)
Q Consensus 247 LsrVk~dfesLksyVssli~vrETllSsekqfq 279 (294)
...+..-+..|+..+..+...-++++..|||.+
T Consensus 109 ~~~~~~~~~~L~~e~~~l~~~L~~~l~~~~qi~ 141 (142)
T d1yvia1 109 RDGCLMALAVVRNDFYDLRNKFQTMLQLEQQIQ 141 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 334555666666666666667778888888864
No 5
>d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.59 E-value=24 Score=26.03 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=38.0
Q ss_pred ccccCCCCCCCCCCcCCCCCC--CCCCCcchhhhhhhc--cCCCcccchhhHHHHHHHHHHHHHHHHHHH
Q 022662 102 GLVDKNGTPLSGWSRNVDLSS--FNGPDEDTWIGISKQ--LGSSDEQDGAYIGELLKSVQMVTDVMEVLV 167 (294)
Q Consensus 102 G~vDk~G~pls~Wsk~~d~ss--~~~~d~~~~~~~~~~--~g~~~~~d~~Yv~e~LksV~mVtdvMEsLv 167 (294)
+|+|..|.|=-.|-|++=.++ +++-+..+.+|+... .+..+..+..=-.+.-+.|..|+..+++..
T Consensus 81 ~Fl~~~GlpgR~~~kHvi~aP~~~~~y~~~~FPgi~dAi~~~~~~~~~~~~w~~~~~qi~~~~~~i~~Aa 150 (157)
T d3bi1a1 81 AFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAA 150 (157)
T ss_dssp TTBCTTCBTTBTTCCBSSEEEETTEEEEEEESHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCccCCCCCCccceeeeCCCCCCCcccccchhHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999987632 111223455665542 111111111113456667777887777654
No 6
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.32 E-value=1.2e+02 Score=21.25 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhccHHHHHhhhhhhhhhhhhHHHHhh
Q 022662 147 AYIGELLKSVQMVTDVMEVLVKRVIMAESETAVEKEKVTLGQEEIRKKANQIENMSLKLEEMER 210 (294)
Q Consensus 147 ~Yv~e~LksV~mVtdvMEsLvKRvi~AESEtaveKeKv~~~~Eei~rK~~QiE~ms~klEeMEr 210 (294)
.+..+|..++...--=++-|-+=|-++|+. -.|..|+.+||.+...-|..+-.++.+|+.
T Consensus 42 ~~~~eL~~~l~siewdL~dLe~av~~ve~n----p~kf~l~~~ei~~Rr~fi~~~~~~I~~~~~ 101 (106)
T d1lvfa_ 42 WTTNELRNNLRSIEWDLEDLDETISIVEAN----PRKFNLDATELSIRKAFITSTRQIVRDMKD 101 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSS----GGGGTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhC----HHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347788888888877788888888777653 467889999999988888877777777753
No 7
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]}
Probab=20.83 E-value=31 Score=23.72 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=21.1
Q ss_pred HHHHHHHHHH-HhHHHHHHHHhhhh
Q 022662 57 KELEVLWRRV-KTTATLLTYLKSKA 80 (294)
Q Consensus 57 KELevL~rRV-KT~atLLtYLKSKA 80 (294)
-.|..++.|| ++.-.+=.||+|||
T Consensus 99 P~L~~~~~~v~~~~P~I~~yl~sRa 123 (123)
T d1oe8a1 99 PEIHKHRENLLASSPRLAKYLSDRA 123 (123)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHcChHHHHHHHccC
Confidence 4789999997 88889999999997
No 8
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=19.92 E-value=83 Score=25.59 Aligned_cols=67 Identities=16% Similarity=0.370 Sum_probs=39.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHh---------hhhHhHHHHHHH
Q 022662 214 GTNGILNEMRQRVEDLVEETSRQRQRAAENEQELCRVKRDFESLKNYVSSLISVRETLL---------SSEKQFQTIERL 284 (294)
Q Consensus 214 GTn~iLneMrqrvedlv~eTsRQRqRAaENE~ELsrVk~dfesLksyVssli~vrETll---------SsekqfqtiE~l 284 (294)
+++.+-+++...||.|+.+.-- +.-+.++..+++.|+..+......-+.-. .--.+|.+++..
T Consensus 85 ~~~~~w~~~~~~vE~LIdqki~--------~~~~~~a~~~l~gL~~~l~~Y~~al~~w~~~~n~~~~~~v~~~f~~l~~~ 156 (263)
T d1i5pa3 85 GSTNLMQDILRETEQFLNQRLN--------TDTLARVNAELIGLQANIREFNQQVDNFLNPTQNPVPLSITSSVNTMQQL 156 (263)
T ss_dssp GCCHHHHHHHHHHHHHHTCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSSCCCSHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHH
Confidence 3445777888888888854322 23345556666666655555544444321 124578888887
Q ss_pred hhcc
Q 022662 285 FERP 288 (294)
Q Consensus 285 feRL 288 (294)
|.+-
T Consensus 157 f~~~ 160 (263)
T d1i5pa3 157 FLNR 160 (263)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 9
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=19.80 E-value=64 Score=21.42 Aligned_cols=36 Identities=14% Similarity=0.259 Sum_probs=26.7
Q ss_pred hccHHHHHhhhhhhhhhhhhHHHHhhhhhchhhhHHHHHHHHHHHH
Q 022662 185 TLGQEEIRKKANQIENMSLKLEEMERFALGTNGILNEMRQRVEDLV 230 (294)
Q Consensus 185 ~~~~Eei~rK~~QiE~ms~klEeMErfA~GTn~iLneMrqrvedlv 230 (294)
....+++++.+.+|...+..++.+ |++|++.|..|.
T Consensus 4 kvd~~~l~~~A~~~~~~~~~l~~~----------l~~l~~~v~~l~ 39 (99)
T d1wa8a1 4 KTDAATLAQEAGNFERISGDLKTQ----------IDQVESTAGSLQ 39 (99)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHH
Confidence 356778888888887777777654 788888887775
No 10
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.52 E-value=1.2e+02 Score=20.35 Aligned_cols=63 Identities=21% Similarity=0.299 Sum_probs=41.2
Q ss_pred ChhhhhhhhhhhhHHHHHHHHhhhhhHHHHHHHHHhhhhhhh-cChH---------HHHHHHHHHHHHHHhHHH
Q 022662 8 DLSSLKSQIIETHEIWKQEMERSQFQVDVLQEKLMEVKTCIK-DSEE---------DAKKELEVLWRRVKTTAT 71 (294)
Q Consensus 8 ~~s~l~S~~~~~~~~Wk~eme~~qsQVdvLq~rl~evKa~~~-gSee---------da~KELevL~rRVKT~at 71 (294)
|+.++...+. .|..-..+|...+..|+.+....-++..... .+.. .-..+|...|.+++..+.
T Consensus 36 dl~~v~~ll~-kh~~fe~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~~~~~~~i~~~~~~L~~~W~~L~~~~~ 108 (124)
T d1quua2 36 SIEEIQSLIT-AHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVP 108 (124)
T ss_dssp STTTHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 5666655554 4555688999999999988877666543322 1111 114689999999887754
Done!