Query 022666
Match_columns 294
No_of_seqs 163 out of 992
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:09:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 4.3E-34 1.5E-38 264.0 11.2 193 76-284 6-217 (280)
2 4hg6_A Cellulose synthase subu 91.9 1.3 4.6E-05 45.5 12.4 97 173-277 237-361 (802)
3 1qg8_A Protein (spore coat pol 83.3 1.7 5.9E-05 36.9 5.7 98 173-270 87-201 (255)
4 2ffu_A Ppgalnact-2, polypeptid 82.4 3.7 0.00013 39.2 8.3 100 173-277 145-283 (501)
5 2c0n_A A197; thermophil protei 80.7 0.9 3.1E-05 39.3 2.8 98 173-273 52-165 (203)
6 1xhb_A Polypeptide N-acetylgal 77.7 8.5 0.00029 36.2 9.0 99 173-277 113-251 (472)
7 4fix_A UDP-galactofuranosyl tr 74.4 1.8 6E-05 43.7 3.3 98 174-277 268-410 (657)
8 2d7i_A Polypeptide N-acetylgal 74.0 5.1 0.00017 39.3 6.4 99 173-277 195-331 (570)
9 3bcv_A Putative glycosyltransf 71.0 2.1 7.2E-05 35.9 2.5 101 173-277 83-218 (240)
10 2z86_A Chondroitin synthase; G 68.7 3.1 0.00011 40.8 3.5 100 173-277 173-323 (625)
11 2p6w_A VP54, putative glycosyl 58.8 7.6 0.00026 33.4 3.6 53 156-211 57-112 (213)
12 2bo4_A Mannosylglycerate synth 37.0 82 0.0028 29.5 7.4 101 173-277 91-210 (397)
13 1omz_A Alpha-1,4-N-acetylhexos 28.2 88 0.003 28.3 5.7 98 173-273 105-224 (293)
14 3l7i_A Teichoic acid biosynthe 26.9 13 0.00046 37.3 0.0 92 173-270 82-191 (729)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=100.00 E-value=4.3e-34 Score=263.96 Aligned_cols=193 Identities=21% Similarity=0.284 Sum_probs=135.8
Q ss_pred CCCCCCCCcEEEEEecCCCchhhHHHHHHHHhcCCCC-eEEEEecCCCCCCCCCCCCCCce----eecCCCCCccccCCC
Q 022666 76 TANPLTRRHLLFSIASSSSSWPRRRSYVRLWYSPNST-RALTFLDRAADSSSAGDPSLPRI----VISADTSKFPFTFPK 150 (294)
Q Consensus 76 ~~~~~~~~~Ilf~I~Ts~~~~~~R~~~ik~ww~~~~~-~~~vfsD~~~~~~~~~~~~lp~v----~i~~d~~~~~y~~~~ 150 (294)
.+.+++.++|+|+|+|+++++.+|++++++||++.+. .++||+|.+++. +|.+ .+..+.+. .+. ..
T Consensus 6 ~~~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~~-------l~~~~~~~~~~~~~~~-~~~-~~ 76 (280)
T 2j0a_A 6 GPLELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDER-------LQERLGPHLVVTQCSA-EHS-HP 76 (280)
T ss_dssp ---CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCHH-------HHHHHGGGEEECCC---------
T ss_pred CCCCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCccc-------ccccccccceeccccc-ccc-cc
Confidence 3457899999999999999999999999999997654 567799877432 2221 12222211 111 11
Q ss_pred CchhHHHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCcc----------cccc
Q 022666 151 GLRSAVRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYEQ----------NAKH 220 (294)
Q Consensus 151 g~~~a~r~~~~i~~~~~~~~~~~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~yiG~~~e~~~~----------~~~~ 220 (294)
++ .++....++.. . .+++|||+++||||||+++||+++|++||+++++|+|..++.... ....
T Consensus 77 ~l--~~K~~~~~~~~---l--~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~ 149 (280)
T 2j0a_A 77 AL--SCKMAAEFDAF---L--VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLV 149 (280)
T ss_dssp CC--CHHHHHHHHHH---H--HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC------------------
T ss_pred ch--HHHHHHHHHHH---h--CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCcccccccc
Confidence 11 12222223321 1 278999999999999999999999999999999999998755311 0123
Q ss_pred cccccccCccccccHHHHHHHHhhhhHhhh--h-cccCCcchHHHHHHHH-HhCCceecCCCCcccCC
Q 022666 221 SFGMAFGGGGFAISHSLARVLAGALDSCLM--R-YAHLYGSDARVFSCLV-ELGVGLTPEPGFHQNTS 284 (294)
Q Consensus 221 g~~~a~GGaG~vlSr~ll~~L~~~~d~C~~--~-~~~~~~~D~~lg~Cl~-~lGV~lt~~p~fhq~d~ 284 (294)
+|+||+||||||||++++++|.+..+.|.- . ......+|+.||+|++ ++||+++++++|||+.-
T Consensus 150 ~~~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 150 RFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp -CCEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred ccCcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence 567899999999999999999987666611 0 0123458999999998 79999999999999764
No 2
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=91.89 E-value=1.3 Score=45.53 Aligned_cols=97 Identities=15% Similarity=0.023 Sum_probs=63.5
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccC--CCCCCeEEeecCCCC-----------c--cc-------------ccccccc
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKY--DDDRWFYVGSNSEGY-----------E--QN-------------AKHSFGM 224 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~y--d~~~p~yiG~~~e~~-----------~--~~-------------~~~g~~~ 224 (294)
.+.+|++++|+|+.+.++.|.++++.+ |++-...-|...... . .. ..++. .
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGG-A 315 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTC-C
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCC-c
Confidence 468999999999999999888888776 555444444321100 0 00 00111 2
Q ss_pred cccCccccccHHHHHHHHhhhhHhhhhcccCCcchHHHHHHHHHhCCceecCC
Q 022666 225 AFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 225 a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~p 277 (294)
...|++.++.+++++++.... + ...+||..++.-+.+.|-+....|
T Consensus 316 ~~~G~~~~~Rr~al~~vGgf~-~------~~~~ED~~l~~rl~~~G~ri~~~~ 361 (802)
T 4hg6_A 316 FFCGSAAVLRRRALDEAGGFA-G------ETITEDAETALEIHSRGWKSLYID 361 (802)
T ss_dssp CCCSSSEEEEHHHHHHHTTCC-C------SSSSHHHHHHHHHHTTTCCEEECC
T ss_pred eecccchhhhHHHHHHcCCcC-C------CCcchHHHHHHHHHHcCCeEEEec
Confidence 345788999999999874321 1 234699999999988887755444
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=83.33 E-value=1.7 Score=36.88 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=57.2
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCC--CCCCeEEeecC----CCCcc----------cccccccccccCccccccHH
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYD--DDRWFYVGSNS----EGYEQ----------NAKHSFGMAFGGGGFAISHS 236 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd--~~~p~yiG~~~----e~~~~----------~~~~g~~~a~GGaG~vlSr~ 236 (294)
.+.+|++++|||.++.++.|.++++.+. ++-.+..|... ..... ...........|++.++.++
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 166 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS 166 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHH
Confidence 4679999999999999877777766553 34445555431 11000 00001123456789999999
Q ss_pred HHHHHHhhhhHhhh-hcccCCcchHHHHHHHHHhC
Q 022666 237 LARVLAGALDSCLM-RYAHLYGSDARVFSCLVELG 270 (294)
Q Consensus 237 ll~~L~~~~d~C~~-~~~~~~~~D~~lg~Cl~~lG 270 (294)
+++++...+..... .......+|..+..-+...|
T Consensus 167 ~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred HHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence 99998633310000 00113458998887776655
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=82.37 E-value=3.7 Score=39.24 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=57.7
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecC-----CCC-------------cc------------------
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS-----EGY-------------EQ------------------ 216 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~yiG~~~-----e~~-------------~~------------------ 216 (294)
-..+|++++|+|..+.++-|..+++.+.......++... +.. ..
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQ 224 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTS
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhcc
Confidence 357999999999999977776666544222222222110 000 00
Q ss_pred -cccccc-cccccCccccccHHHHHHHHhhhhHhhhhcccCC-cchHHHHHHHHHhCCceecCC
Q 022666 217 -NAKHSF-GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 217 -~~~~g~-~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~lGV~lt~~p 277 (294)
.....+ .....|+.+++++++++++.. +|+- + ..+ ++|..+..=+...|..+...|
T Consensus 225 ~~~~~~~~~~~~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 225 GNPVAPIKTPMIAGGLFVMDKFYFEELGK-YDMM---M-DVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp SCTTSCEECSSCCSSSEEEEHHHHHHTTC-CCTT---C-CSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCcccCccccceEEEEEHHHHHHhCC-CCcc---c-cccCcchHHHHHHHHhcCCeEEEcc
Confidence 000000 113457889999999998763 3321 1 233 589999888878886655444
No 5
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=80.66 E-value=0.9 Score=39.31 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=57.5
Q ss_pred CCccEEEEEcCC---ccccHHHHHHHHccCCCCCCeEEeecCC-CC-c--------ccccccccccccCccc-cccHHHH
Q 022666 173 AGVRWFVFGDDD---TVFFVDNLVKTLSKYDDDRWFYVGSNSE-GY-E--------QNAKHSFGMAFGGGGF-AISHSLA 238 (294)
Q Consensus 173 ~~~~Wf~~~DDD---Tyv~~~nL~~~L~~yd~~~p~yiG~~~e-~~-~--------~~~~~g~~~a~GGaG~-vlSr~ll 238 (294)
.++++++++|.| .-+.++.+.++|.. ..++..|.... +. . .....+......|+|+ +++|+++
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V~ 128 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKREFL 128 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEHHHH
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccccEEEEhHHHH
Confidence 689999999999 99999999999955 77888888631 10 0 0011112334566676 6799999
Q ss_pred HHHHhh-h-hHhhhhcccCCcchHHHHHHHHHhCCce
Q 022666 239 RVLAGA-L-DSCLMRYAHLYGSDARVFSCLVELGVGL 273 (294)
Q Consensus 239 ~~L~~~-~-d~C~~~~~~~~~~D~~lg~Cl~~lGV~l 273 (294)
++|..- + ---.++..+.++||+..=.-++..|-.+
T Consensus 129 e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 129 EKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp TTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred HHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 998532 2 0000112345567776544344334333
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=77.73 E-value=8.5 Score=36.23 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=57.3
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCCCCCe-EEeecC---CC-C-------------cccc----------------
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWF-YVGSNS---EG-Y-------------EQNA---------------- 218 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~-yiG~~~---e~-~-------------~~~~---------------- 218 (294)
...+|++++|+|+.+.++-|..+++.+..+... ..|... +. . ....
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 358999999999999877777766654322222 222210 00 0 0000
Q ss_pred -----cccccccccCccccccHHHHHHHHhhhhHhhhhcccCC-cchHHHHHHHHHhCCceecCC
Q 022666 219 -----KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 219 -----~~g~~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~lGV~lt~~p 277 (294)
... .....|+.+++++++++++.. +|+- + ..+ +||..++.=+...|..+...|
T Consensus 193 ~~~~~~~~-~~~~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~R~~~~G~~i~~~p 251 (472)
T 1xhb_A 193 GDRTLPVR-TPTMAGGLFSIDRDYFQEIGT-YDAG---M-DIWGGENLEISFRIWQCGGTLEIVT 251 (472)
T ss_dssp TCTTSCEE-CSBCCSSSEEEEHHHHHHTTS-CCTT---S-CTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred CCCCCccc-CccccceeEEEEHHHHHHcCC-CCCc---c-cccCchhHHHHHHHHhcCCeEEEcc
Confidence 000 113456778899999998753 3321 1 223 589999888888886654433
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=74.41 E-value=1.8 Score=43.74 Aligned_cols=98 Identities=19% Similarity=0.059 Sum_probs=59.5
Q ss_pred CccEEEEEcCCccccHHHHHHHHccCCCC-CCeEEeecC----CCC-----c-------c------cc------------
Q 022666 174 GVRWFVFGDDDTVFFVDNLVKTLSKYDDD-RWFYVGSNS----EGY-----E-------Q------NA------------ 218 (294)
Q Consensus 174 ~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~-~p~yiG~~~----e~~-----~-------~------~~------------ 218 (294)
+++|++++|||+.+.++.|.+++..++.. +...+|... +.. . . ..
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 68999999999999988888777654322 234445311 000 0 0 00
Q ss_pred ----------cccccccccCccccccHHHHHHHHhhhhHhhhhcccCCcchHHHHHHHHHhCCceecCC
Q 022666 219 ----------KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 219 ----------~~g~~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~p 277 (294)
........+|++.++.+++++++.- ++. + -.+.+|+.++.=+.+.|.++...|
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg-fd~----~-F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ-PLP----L-FIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS-CCS----C-SSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCC-Chh----H-hccCcHHHHHHHHHHcCCeEEEEC
Confidence 0000113467889999999998753 221 1 133499999888888887754333
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=73.96 E-value=5.1 Score=39.31 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=58.0
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecC---------------CCC----cc-------------c---
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNS---------------EGY----EQ-------------N--- 217 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~yiG~~~---------------e~~----~~-------------~--- 217 (294)
...+|++++|+|+.+.++-|..+++.+..+....+|... +.. .. .
T Consensus 195 A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (570)
T 2d7i_A 195 ATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKAD 274 (570)
T ss_dssp CCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSS
T ss_pred cCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccC
Confidence 357999999999999876666655544323333333210 000 00 0
Q ss_pred --ccccccccccCccccccHHHHHHHHhhhhHhhhhcccCC-cchHHHHHHHHHhCCceecCC
Q 022666 218 --AKHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 218 --~~~g~~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~lGV~lt~~p 277 (294)
.... .....|+.+++++++++++.. +|+- + ..+ ++|..+..-+...|..+...|
T Consensus 275 ~~~~~~-~~~~~g~~~~irr~~~~~iGg-fDe~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 331 (570)
T 2d7i_A 275 PSDPFE-SPVMAGGLFAVDRKWFWELGG-YDPG---L-EIWGGEQYEISFKVWMCGGRMEDIP 331 (570)
T ss_dssp TTSCEE-CSSCCSSSEEEEHHHHHHTTS-SCTT---C-CSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred CCccee-cccccceEEEEEHHHHHhcCC-CCCc---c-cccCcchHHHHHHHHhCCCeEEEcc
Confidence 0000 112447889999999998754 3331 1 233 589999988888887754433
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=71.02 E-value=2.1 Score=35.87 Aligned_cols=101 Identities=11% Similarity=-0.052 Sum_probs=55.1
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCC-CCCeEEeecCC----C-----Ccc----cccc-------------cc---
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDD-DRWFYVGSNSE----G-----YEQ----NAKH-------------SF--- 222 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~-~~p~yiG~~~e----~-----~~~----~~~~-------------g~--- 222 (294)
-..+|++++|+|.++.++.|.+++..+.. +..+.+|.... . ... ...+ +.
T Consensus 83 a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
T 3bcv_A 83 ATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPY 162 (240)
T ss_dssp CCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHH
T ss_pred cCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchh
Confidence 35799999999999997777777665432 33454443210 0 000 0000 00
Q ss_pred -----cccccCccccccHHHHHHHHhhhhHhhhhcccCCcchHHHHHHHHHhCCceecCC
Q 022666 223 -----GMAFGGGGFAISHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 223 -----~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~p 277 (294)
.+...|++.++.+++++++.-.+++- + ....+|..+..=+...|-++...|
T Consensus 163 ~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~---~-~~~~eD~~~~~r~~~~g~~i~~~~ 218 (240)
T 3bcv_A 163 AREERAIQVSAKVVLYRRNLIEKKHLRFVSE---R-ILPSEDLIFNVDVLANSNIVCVLP 218 (240)
T ss_dssp HHHHHHHHHTCSCEEEEHHHHHHTTCCCCCT---T-TCTTHHHHHHHHHHTTCSCEEECC
T ss_pred hccccccccchhheeeeHHHHHHcCCccCCC---C-CccCCCHHHHHHHHHhCCEEEEEC
Confidence 01123678899999988854122221 0 123489888777766665554433
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=68.67 E-value=3.1 Score=40.79 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=60.8
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCC-CCCeEEeecC---CCCc-------------c-------------------
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDD-DRWFYVGSNS---EGYE-------------Q------------------- 216 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~-~~p~yiG~~~---e~~~-------------~------------------- 216 (294)
.+.+|++++|+|+.+..+-|.+++..+.. .....+|... .... .
T Consensus 173 a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (625)
T 2z86_A 173 AKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKS 252 (625)
T ss_dssp CCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------C
T ss_pred CCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCc
Confidence 46799999999999998877777766532 2234444321 0000 0
Q ss_pred ------------c-c-cccccccccCccccccHHHHHHHHhhhhHhhhhcccCC-cchHHHHHHHHHhCCceecCC
Q 022666 217 ------------N-A-KHSFGMAFGGGGFAISHSLARVLAGALDSCLMRYAHLY-GSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 217 ------------~-~-~~g~~~a~GGaG~vlSr~ll~~L~~~~d~C~~~~~~~~-~~D~~lg~Cl~~lGV~lt~~p 277 (294)
. . .........|+++++++++++++.. +++- + ..+ ++|..++.=+...|..+...|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 253 VDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGW-FDEE---F-THWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp CCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCC-CCTT---C-SSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred cccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCC-Cccc---c-ccCCcchhhhhhhHHhCCceEEEcc
Confidence 0 0 0000012567889999999998753 3321 1 223 489999888888887765544
No 11
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=58.78 E-value=7.6 Score=33.43 Aligned_cols=53 Identities=19% Similarity=0.385 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhccccCCccEEEEEcCCccccHHHHHHHHccC---CCCCCeEEeecC
Q 022666 156 VRVARVVKEAVDLTDEKAGVRWFVFGDDDTVFFVDNLVKTLSKY---DDDRWFYVGSNS 211 (294)
Q Consensus 156 ~r~~~~i~~~~~~~~~~~~~~Wf~~~DDDTyv~~~nL~~~L~~y---d~~~p~yiG~~~ 211 (294)
|+...+++.+...+ |+++||..+|-|+++--.|...=|.+| +...-++.|...
T Consensus 57 W~ksW~IR~AM~kh---PeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e 112 (213)
T 2p6w_A 57 FRRSWIIQQAAEKF---PSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHE 112 (213)
T ss_dssp HTHHHHHHHHHHHC---TTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECC
T ss_pred chhhHHHHHHHHHC---CCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccc
Confidence 44444677766555 999999999999999866666667777 434457777743
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=36.98 E-value=82 Score=29.46 Aligned_cols=101 Identities=16% Similarity=0.020 Sum_probs=61.7
Q ss_pred CCccEEEEEcCCcc-ccHHHHHHHHccCCCCCCeEEeecCCCC-c-cc-ccc-------ccc--------ccccCccccc
Q 022666 173 AGVRWFVFGDDDTV-FFVDNLVKTLSKYDDDRWFYVGSNSEGY-E-QN-AKH-------SFG--------MAFGGGGFAI 233 (294)
Q Consensus 173 ~~~~Wf~~~DDDTy-v~~~nL~~~L~~yd~~~p~yiG~~~e~~-~-~~-~~~-------g~~--------~a~GGaG~vl 233 (294)
.+.+|++++|.|.- ..++-+.+++...+..-++.+|...... . .. ... .|+ .+ .+|-+++
T Consensus 91 a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i~dp-~sG~~a~ 169 (397)
T 2bo4_A 91 TQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQP-LGGELLM 169 (397)
T ss_dssp CCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCT-TCCCEEE
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccccccC-CcccEEE
Confidence 46899999999995 7888777777765445577888632110 0 00 000 111 11 1355699
Q ss_pred cHHHHHHHHhhhhHhhhhcccCCcchHHHHHHHHHhCCceecCC
Q 022666 234 SHSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELGVGLTPEP 277 (294)
Q Consensus 234 Sr~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lGV~lt~~p 277 (294)
++.+++.+.... ... ....|+.|+.+-..+...|..+...|
T Consensus 170 ~R~vl~~l~~~~--~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 170 RREVAAMLYEDE--RVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp EHHHHHHHHHCH--HHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred eHHHHHHHhhhc--ccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 999999885421 101 23467778888777777787765444
No 13
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=28.23 E-value=88 Score=28.28 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCC-------ccc-----------ccccccccccCcccccc
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGY-------EQN-----------AKHSFGMAFGGGGFAIS 234 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~yiG~~~e~~-------~~~-----------~~~g~~~a~GGaG~vlS 234 (294)
-+.+.++.+|||+.+..+.|.....-......-.+|...... ..+ ....|.|.-.||.| +-
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf~~R~H~~~~~~~w~Y~~~~~~~p~~~~~~~YSmVLTgaAF-~H 183 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASF-FN 183 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEEEECTTSCCCSSSSSCCBSEECTTEEE-EE
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecCchhhhccCCCCccccccccccccccCCCCeEEEEECchHH-hc
Confidence 569999999999999999988766544333344667653110 000 11125566665544 33
Q ss_pred HHHHHHHHhhhh---HhhhhcccCCcchHHHHHHHHH-hCCce
Q 022666 235 HSLARVLAGALD---SCLMRYAHLYGSDARVFSCLVE-LGVGL 273 (294)
Q Consensus 235 r~ll~~L~~~~d---~C~~~~~~~~~~D~~lg~Cl~~-lGV~l 273 (294)
+..+........ +..++ ..-+||+.+-..+++ +|.+.
T Consensus 184 r~Yl~lyt~~p~~ir~~VDe--~~NCEDIaMNFlVA~~T~~pP 224 (293)
T 1omz_A 184 SKYLELFQKQPAAVHALIDE--TQNCDDIAMNFLVTRHTGKPS 224 (293)
T ss_dssp THHHHHHHTSCHHHHHHHHH--HTCCHHHHHHHHHHHHHSSCS
T ss_pred cHHHHHHHHhHHHHHHHHhc--cCchHHHHHHHHHHHHhCCCC
Confidence 333333321111 11111 122489999999886 67653
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=26.94 E-value=13 Score=37.28 Aligned_cols=92 Identities=13% Similarity=0.045 Sum_probs=0.0
Q ss_pred CCccEEEEEcCCccccHHHHHHHHccCCCCCCeEEeecCCCCc---------c------c---ccccccccccCcccccc
Q 022666 173 AGVRWFVFGDDDTVFFVDNLVKTLSKYDDDRWFYVGSNSEGYE---------Q------N---AKHSFGMAFGGGGFAIS 234 (294)
Q Consensus 173 ~~~~Wf~~~DDDTyv~~~nL~~~L~~yd~~~p~yiG~~~e~~~---------~------~---~~~g~~~a~GGaG~vlS 234 (294)
...+|++++|+|.++.++.|.+++..+. +.++.+|....... . . .....-....+++.++.
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 160 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFN-NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLRKQSACNIIFR 160 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhhccchhheeee
Confidence 3578999999999999988888888877 44555554321000 0 0 00000012345678899
Q ss_pred HHHHHHHHhhhhHhhhhcccCCcchHHHHHHHHHhC
Q 022666 235 HSLARVLAGALDSCLMRYAHLYGSDARVFSCLVELG 270 (294)
Q Consensus 235 r~ll~~L~~~~d~C~~~~~~~~~~D~~lg~Cl~~lG 270 (294)
+++++++.-.+++-. .+.+|..+..-+...|
T Consensus 161 r~~l~~~gl~fde~~-----~~~ED~d~~~rl~~~g 191 (729)
T 3l7i_A 161 TAIVRAHHIRFNENL-----NTYVDWSFVLEYMKYV 191 (729)
T ss_dssp ------------------------------------
T ss_pred HHHHHHcCCCcCCCC-----CcccCHHHHHHHHHhc
Confidence 988887652233211 2347777665555444
Done!