BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022673
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 160/300 (53%), Gaps = 33/300 (11%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+ +HRKE LQ K +K A K K ++KQ+ E+I++L A+L +KH EL
Sbjct: 11 LAKQHRKEKKDLQAKIQSMKNAVPKNDKK----RRKQLTEDIAKLEAELSQKHENELKLQ 66
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSK------GTKRREKRAQQEAAREQR 114
SS ++ + A+ ++V + +Q+ PSK KRR+K+A E RE R
Sbjct: 67 NTSS--------VEEVSDALDSMSVANHEEQSDPSKQSRTSKAQKRRDKKAALEKEREMR 118
Query: 115 IQE-EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYN 173
I E E N+ R E KL +KL L + +I DGHC+YRAVE QL G A
Sbjct: 119 IAEAEVENLSGSRHQEGLKLREKLVERHLQIKEISSDGHCMYRAVEHQLTE-RGLA--LG 175
Query: 174 FQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELEL 233
++LR A YMR H+ DF+PF + N +A E FE YC +V TAAWGG+LEL
Sbjct: 176 LKELRDQTAQYMRSHADDFMPFLTNPNTGDMYTA----EEFEKYCSDVADTAAWGGQLEL 231
Query: 234 RALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
+AL+ L+ I + P + +G+EY I L Y RHA+GLGEHYNSV P+
Sbjct: 232 KALSQVLQLPIEVIQADSPCITIGEEYDK-------PKITLIYMRHAYGLGEHYNSVEPL 284
>sp|Q5M8L0|OTU6B_XENTR OTU domain-containing protein 6B OS=Xenopus tropicalis GN=otud6b
PE=2 SV=1
Length = 294
Score = 175 bits (444), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 162/296 (54%), Gaps = 30/296 (10%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ +HRKE LQ K +K + K K ++KQ+ E+I++L A L +H +EL +
Sbjct: 13 LIKQHRKEKRDLQAKIQSMKNSVPKNDKK----RRKQLTEDIAKLEADLDVRHKEELEAF 68
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQA-----KPSKGTKRREKRAQQEAAREQRI 115
+ S + N GVT + ++A + SK KRREK+A QE R++RI
Sbjct: 69 AQKQPEPTQVSGITN------GVTSLDLGNEAPVQQPRQSKAQKRREKKAAQEKERDERI 122
Query: 116 QE-EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNF 174
E E +N+ R +E +KL + L L + I DGHC+YRA+E QL + N
Sbjct: 123 AEAEIANLSGARHLESQKLARILAERELQIRQIPSDGHCMYRAIEHQLRERGNDLTVAN- 181
Query: 175 QQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELR 234
LR A YM++H+ DFLPF L+ + G+ Q E F YC ++ +T AWGG+LELR
Sbjct: 182 --LRSQTADYMQNHAEDFLPF-LTNSSTGDMYTQ---EEFLKYCTDIVNTPAWGGQLELR 235
Query: 235 ALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
AL+H L+ I + + +G+EYS+ +I L Y RHA+GLGEHYNSV
Sbjct: 236 ALSHILKTAIEVIQAESSPIVIGEEYSS-------KAITLVYMRHAYGLGEHYNSV 284
>sp|Q6GM06|OTU6B_XENLA OTU domain-containing protein 6B OS=Xenopus laevis GN=otud6b PE=2
SV=1
Length = 294
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 26/294 (8%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ + RKE ++Q K +K + K K ++KQ+ E+I++L A++ +H +EL +L
Sbjct: 13 LIKQQRKEKKEVQAKIQCMKNSVPKNDKK----RRKQMTEDIAKLEAEVEARHKEELEAL 68
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKP--SKGTKRREKRAQQEAAREQRIQE- 117
+ + S++ N V + + S+ +P SK KRREK+A QE R+ RI E
Sbjct: 69 AQKPTEPTQVSSITN---GVTSLDLGSEEPVQQPRVSKAQKRREKKAAQEKERDDRIAEA 125
Query: 118 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQL 177
E +N+ R +E +KL + L L + I DGHC+YRA+E QL + N L
Sbjct: 126 EIANLSGARHLESQKLAQILAERELQIRQIPSDGHCMYRAIEHQLNEQGNSLTVAN---L 182
Query: 178 RQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALT 237
R A YM+ + DFLPF L+ + G+ Q E F+ YC ++ +T AWGG+LELRAL+
Sbjct: 183 RSQTADYMQKRAEDFLPF-LTNSSTGDMYTQ---EEFQKYCTDIVNTPAWGGQLELRALS 238
Query: 238 HCLRKHI-MIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
H L+ I +I + S P V +G+EYSN I L Y RHA+GLGEHYNSV
Sbjct: 239 HILKTPIEVIQAESLPIV-IGEEYSN-------KPITLVYMRHAYGLGEHYNSV 284
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 161/294 (54%), Gaps = 25/294 (8%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ R R+E +LQ K +K A K K ++KQ+ EE+++L A+L +KH +EL L
Sbjct: 18 LVKRQRREKRELQAKIQGMKNAVPKNDKK----RRKQLAEEVAKLEAELEQKHKEELKQL 73
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQ---AKPSKGTKRREKRAQQE-AAREQRIQ 116
+ E++ +D++ VA + + Q + SK KRREK+A E E+ +
Sbjct: 74 KEAMP---EQNKIDSIADGVANFELEGREQQIQHPRISKAQKRREKKAALEKEREERIAE 130
Query: 117 EEQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQ 176
E N+ R +E +KL L L + I DGHC+YRA+EDQL + +
Sbjct: 131 AEIENLTGARHLESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQL---KDHHNSWTVAT 187
Query: 177 LRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRAL 236
LR A Y+ H DFLPF + N G+ ++ E FE YC ++ +TAAWGG+LELRAL
Sbjct: 188 LRNQTAKYIHSHFDDFLPFLTNPN-TGDMYSK---EEFEKYCDDIANTAAWGGQLELRAL 243
Query: 237 THCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
+H L+ I + P + +G+EY SG IIL Y RHA+GLGEHYNSV
Sbjct: 244 SHILQTPIEVVQMDSPSIIVGEEY-------SGKPIILVYMRHAYGLGEHYNSV 290
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 25/288 (8%)
Query: 4 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYS 63
RHRKE +LQ K +K A K K ++KQ+ E++++L ++ +KH +EL L +
Sbjct: 18 RHRKEKKELQAKIQGMKNAVPKNDKK----RRKQLTEDVAKLEKEMEQKHREELEQLKLT 73
Query: 64 SSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQE-AAREQRIQEEQSNI 122
+ +++ +D++ AV ++ ++ + SK KRREK+A E E+ + E N+
Sbjct: 74 T----KENKIDSV--AVNISNLVLENQPPRISKAQKRREKKAALEKEREERIAEAEIENL 127
Query: 123 VSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVA 182
R +E EKL + L L + I DGHC+Y+A+EDQL + LR A
Sbjct: 128 TGARHMESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALT---VVALRSQTA 184
Query: 183 AYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRK 242
YM+ H DFLPF + N E F+ YC+++ +TAAWGG+LELRAL+H L+
Sbjct: 185 EYMQSHVEDFLPFLTNPNT----GDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQT 240
Query: 243 HIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
I I P + +G+EYS +IL Y RHA+GLGEHYNSV
Sbjct: 241 PIEIIQADSPPIIVGEEYSK-------KPLILVYMRHAYGLGEHYNSV 281
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 158/291 (54%), Gaps = 24/291 (8%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ RHRKE +LQ K +K A K K ++KQ+ E++++L ++ +KH +EL L
Sbjct: 15 LVRRHRKEKKELQAKIQGMKNAVPKNDKK----RRKQLTEDVAKLEREMEQKHREELEQL 70
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQE-AAREQRIQEEQ 119
+ S +D++ AV ++ ++ + SK KRREK+A E E+ + E
Sbjct: 71 KQLTFKD---SKIDSV--AVNISNLVLENQPPRISKAQKRREKKAALEKEREERIAEAEI 125
Query: 120 SNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQ 179
N+ R +E EKL + L L + I DGHC+Y A+EDQL + LR+
Sbjct: 126 ENLSGARHLESEKLAQILAARELEIKQIPSDGHCMYGALEDQLREQDCALT---VASLRR 182
Query: 180 MVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHC 239
A YM+ HS DFLPF L+ G+ E F YC ++ +TAAWGG+LELRAL+H
Sbjct: 183 QTAEYMQTHSDDFLPF-LTNPSTGD---MYTPEEFGKYCDDIVNTAAWGGQLELRALSHI 238
Query: 240 LRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
L+ I I P + +G+EY + ++L Y RHA+GLGEHYNSV
Sbjct: 239 LQTPIEILQADAPPIIVGEEYPR-------NPLVLVYMRHAYGLGEHYNSV 282
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 29/294 (9%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
++ RH +E +LQ LK + K K ++KQ+ +ISRL A++ ++H +EL
Sbjct: 11 VIRRHYREKRELQAHIQTLKASVPKNDKG----RRKQMLADISRLEAEMEQRHKQELEKF 66
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQEAAREQRIQEEQS 120
G N S++D++ + + + ++ +P K KRR++RA QE ++R+ Q+
Sbjct: 67 G-----ENPDSSVDSVTADLEKMNL--ENMPPRPPKAQKRRDRRAHQERRHQERMPAAQA 119
Query: 121 -NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQ 179
+ ++R E+EK+ LG L + I DGHC+YRA++DQL + LR
Sbjct: 120 EQLAANRREEEEKVAAILGAKNLEMKTIPADGHCMYRAIQDQLVF------SVTIESLRY 173
Query: 180 MVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHC 239
A YMR H DFLPF+ +E G + E F YC ++ A+WGG+LELRAL+H
Sbjct: 174 RTAYYMRKHIDDFLPFF-TEPEAGNFYTR---EDFLRYCDDIVHNASWGGQLELRALSHV 229
Query: 240 LRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
L+ I + + P + +G+EY+ + L Y +A GEHYNSV PI
Sbjct: 230 LQTPIEVVQANSPTIVIGEEYTR-------KPVTLVYLHYACDFGEHYNSVKPI 276
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 38/298 (12%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+L RH++E +LQ + LK + K K K+KQ+ ++++R+ A++ +KH +EL
Sbjct: 11 ILRRHQRERQELQAQIRSLKNSVPKTDKT----KRKQLLQDVARMEAEMAQKHRQELEKF 66
Query: 61 GYSSSNGNEKSNLDNLVKAVAGVTVISQHDQAKPSKGTKRREKRAQQEAAREQR----IQ 116
+ S+++++V+ +A + + + +P + +K KR + E+ +R Q
Sbjct: 67 -------QDDSSIESVVEDLAKMNL-----ENRPPRSSKAHRKRERMESEERERQESIFQ 114
Query: 117 EEQS-NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQ 175
E S ++ + E+EKL LG GL + I DGHC+YRA++DQL + +
Sbjct: 115 AEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQLVF------SVSVE 168
Query: 176 QLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRA 235
LR A+YM+ H +FLPF+ + E S + F YC + T AWGG+LELRA
Sbjct: 169 MLRCRTASYMKKHVDEFLPFFSN----PETSDSFGYDDFMIYCDNIVRTTAWGGQLELRA 224
Query: 236 LTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
L+H L+ I + P + +G+EY IIL Y R+A+ LGEHYNSV P+
Sbjct: 225 LSHVLKTPIEVIQADSPTLIIGEEYVK-------KPIILVYLRYAYSLGEHYNSVTPL 275
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 38/311 (12%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+LS+ R+E +LQ+K T L+K +G+K +++A ++++IS++ A L +KHA E L
Sbjct: 28 LLSKQREECKELQSKITNLRKQLKEGNKKQKRA----LQQKISQMEADLSQKHATERQKL 83
Query: 61 GYSSSNGNEKSN---LDNLVKAVAGVTVIS-------------QHDQAKPSKGTKRREKR 104
NE L+ L++ + + + ++ +P K R+++R
Sbjct: 84 DKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKER 143
Query: 105 AQQEAAREQRIQEE---QSNIVSD-RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVED 160
++ A +++ E+ +S ++D + E +K K L GL DI DG+CL+ ++
Sbjct: 144 LERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISH 203
Query: 161 QLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKE 220
QL + N Q LR A Y+ H F F ++ EES +V +YC E
Sbjct: 204 QLNYHHNVK--LNSQALRNKSADYVLKHCEQFEGF-----LLDEESG--EVLPVSDYCNE 254
Query: 221 VESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHA 280
+ + + WG ++E++AL + L + +Y+ P ++ N + + ++Y++H
Sbjct: 255 IRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVLKF-----NPSTVKFEKPLCIAYYQHL 309
Query: 281 FGLGEHYNSVI 291
FGLG HYNS++
Sbjct: 310 FGLGAHYNSLL 320
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 41/310 (13%)
Query: 1 MLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASL 60
+L+RHRKE LQNK T +KK A K +K+K+V + L KL+ K E+
Sbjct: 16 ILARHRKENKDLQNKITGMKKQATK-------SKRKEVNSKCLDLQDKLKTKQENEIRDW 68
Query: 61 GYSSSNGNEKSNLDNLV--KAVAGVTVISQHDQAKPSKG-------TKRREKRAQQEAAR 111
+++ + D + K + +++ + + TK+R R ++ A+
Sbjct: 69 KIANNEVFDAEQEDEVTPEKLLEQLSISRDEKEQQNVPVQQQQQGQTKKRRNRQKERLAK 128
Query: 112 EQ----RIQEEQSNIVSD----RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLA 163
+++EE + S + +E E +++ L DI+PDGHCL+ ++ DQL
Sbjct: 129 RDAAIAKMKEEAALEASKQPDLKKMEQESIDQLCELKKLKQFDIQPDGHCLFASILDQLK 188
Query: 164 HLSGGA---SPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKE 220
+ +LR + Y+++H DF+P+ E + +++ + Y KE
Sbjct: 189 LRHDPKKLDQDMDVMKLRWLSCNYVQEHRDDFIPYLFDEETM-------KMKDIDEYTKE 241
Query: 221 VESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHA 280
+E TA WGGE+E+ AL+H I I P + Y+ G + L Y++H+
Sbjct: 242 MEHTAQWGGEIEILALSHVFDCPISILMSGRP----IQVYNECG---KNPELKLVYYKHS 294
Query: 281 FGLGEHYNSV 290
+ LGEHYNS+
Sbjct: 295 YALGEHYNSL 304
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSEN 200
G TV + DG+CL+R+V + L G + +QLRQMV Y+R++ +FL YL
Sbjct: 589 GYTVKQVSGDGNCLFRSVCKSIRALRGEK--FTHRQLRQMVVDYLREN-PEFLQVYL--E 643
Query: 201 MIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKH---IMIYSGSFPDVEMG 257
+ + S + E Y E+ WG + L+ L+ L+ +++ + F V
Sbjct: 644 YVARQRDNS-LPSTEQYLSEMSKCGTWGDLICLKTLSEILKVQFNLLILNTKQFQMVSSQ 702
Query: 258 KEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
+Y + I L Y + HY S++PI
Sbjct: 703 DDYPD--------VIPLGYIDNY-----HYTSLVPI 725
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPF--YLS 198
G V +K DG+CL+RAV L L+ Y+ + LR V Y+ H P+ Y++
Sbjct: 605 GYKVIPVKGDGNCLFRAVGKSL-RLNQNIK-YSHEDLRAQVVTYLTSHKEFLEPYLEYVT 662
Query: 199 ENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLR 241
E+ G+ + Q + E Y K + WG + LR L+ L+
Sbjct: 663 ES--GDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSEILK 703
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 36/170 (21%)
Query: 125 DRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAY 184
D T D L K LGL + DG CL+RAV +Q+ H S ++R Y
Sbjct: 21 DATPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLH-----SQSRHVEVRMACIHY 71
Query: 185 MRDHSSDFLPFYLSENMIGEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKH 243
+R++ F F +E FE Y K +E+ W G++E+ AL+ RK
Sbjct: 72 LRENREKFEAF---------------IEGSFEEYLKRLENPQEWVGQVEISALSLMYRKD 116
Query: 244 IMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
+IY P+V + N + ++L F G HY+ V PI
Sbjct: 117 FIIYRE--PNVSPSQVTENNFPE----KVLL-----CFSNGNHYDIVYPI 155
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 123 VSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVA 182
+ D T D L K LGL + DG CL+RAV +Q+ H S ++R
Sbjct: 19 LEDETPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLH-----SQSRHVEVRMACI 69
Query: 183 AYMRDHSSDFLPFYLSENMIGEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLR 241
Y+R++ F F +E FE Y K +E+ W G++E+ AL+ R
Sbjct: 70 RYLRENREKFEAF---------------IEGSFEEYLKRLENPQEWVGQVEISALSLMYR 114
Query: 242 KHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
K +IY P+V N + ++L F G HY+ V PI
Sbjct: 115 KDFVIYQE--PNVSPSHVTENNFPE----KVLL-----CFSNGNHYDIVYPI 155
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 126 RTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYM 185
+++ + +++ LG LGL + D CL+RA+ +QL H S + Q+R+ +YM
Sbjct: 209 KSLNEASMDEYLGSLGLFRKVVAKDASCLFRAISEQLFH-----SQIHHLQIRRACVSYM 263
Query: 186 RDHSSDFLPFYLSENMIGEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHI 244
+++ F +S VE FE Y + + G+LEL+AL+ +
Sbjct: 264 KENQQAF---------------ESYVEGSFEKYLERLGDPKESAGQLELKALSLIYNRDF 308
Query: 245 MIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
+IY +P + NG D IIL Y + HY+SV
Sbjct: 309 IIY--RYPGKPPTQVTDNGFED----KIILCYSNNG-----HYDSV 343
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 48/180 (26%)
Query: 118 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQL 177
EQ + ++T+ D+K G + +K DG CL+RAV DQ+ Y Q +
Sbjct: 150 EQQELCFEKTLSDKK--------GFIIKQMKEDGACLFRAVADQV---------YGDQDM 192
Query: 178 RQMVAAYMRDH---SSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELR 234
++V + D+ ++D+ Y++E+ F Y G +E++
Sbjct: 193 HEVVRKHCMDYLMKNADYFSNYVTED-------------FTTYINRKRKNNCHGNHIEMQ 239
Query: 235 ALTHCLRKHIMIYSGSFPDVEMGKEYSN---GGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
A+ + + +Y + G E N G + I +SYHR+ HYNSV+
Sbjct: 240 AMAEMYNRPVEVY-------QYGTEPINTFHGIQKNEDEPIRVSYHRNI-----HYNSVV 287
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 121 NIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQM 180
N S +++ + +++ LG LGL D CL+RA+ +QL S + ++R+
Sbjct: 210 NYCSQKSLNEASMDEYLGSLGLFRKLTAKDASCLFRAISEQLF-----CSQVHHLEIRKA 264
Query: 181 VAAYMRDHSSDFLPFYLSENMIGEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHC 239
+YMR++ F +S VE FE Y + + G+LE+RAL+
Sbjct: 265 CVSYMRENQQTF---------------ESYVEGSFEKYLERLGDPKESAGQLEIRALSLI 309
Query: 240 LRKHIMIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSV 290
+ ++Y FP NG D I+L Y HY+SV
Sbjct: 310 YNRDFILY--RFPGKPPTYVTDNGYED----KILLCYSSSG-----HYDSV 349
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 36/155 (23%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 210 GFVIKKMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 260
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIY-SGSFPDVEM 256
+E+ F Y G +E++A+ + + +Y SG+ P
Sbjct: 261 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPINTF 307
Query: 257 GKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
+G ++ I +SYHR+ HYNSV+
Sbjct: 308 -----HGIHQNNDEPIRVSYHRNI-----HYNSVV 332
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 34/169 (20%)
Query: 125 DRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAY 184
D T D L K LGL + DG CL+RAV +Q+ H S ++R
Sbjct: 21 DATPMDAYLRK----LGLYRKLVAKDGSCLFRAVAEQVLH-----SQSRHVEVRMACIHC 71
Query: 185 MRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHI 244
+R++ F E +IG FE Y K +E+ W G++E+ AL+ RK
Sbjct: 72 LRENREKF------EAIIGGS--------FEGYLKRLENPQEWVGQMEISALSLMYRKDF 117
Query: 245 MIYSGSFPDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
+ ++E S ++ ++L F G HY+ V P+
Sbjct: 118 IT------NLEPNVSPSQVTENNFPEKVLL-----CFSNGNHYDIVYPV 155
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 170 GFIIKQMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 220
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMG 257
+E+ F Y G +E++A+ + + +Y + G
Sbjct: 221 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY-------QYG 260
Query: 258 KEYSN---GGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
E N G + I +SYHR+ HYNSV+
Sbjct: 261 TEPINTFHGIQQNEDEPIRVSYHRNI-----HYNSVV 292
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 170 GFIIKQMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 220
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMG 257
+E+ F Y G +E++A+ + + +Y + G
Sbjct: 221 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVY-------QYG 260
Query: 258 KEYSN---GGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
E N G + I +SYHR+ HYNSV+
Sbjct: 261 TEPINTFHGIQQNEDEPIRVSYHRNI-----HYNSVV 292
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 34/154 (22%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 212 GFIIKQMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 262
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMG 257
+E+ F Y G +E++A+ + + +Y S +
Sbjct: 263 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINT- 308
Query: 258 KEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
+G + I +SYHR+ HYNSV+
Sbjct: 309 ---FHGIHQNEDEPIRVSYHRNI-----HYNSVV 334
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 34/154 (22%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 212 GFIIKQMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 262
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVEMG 257
+E+ F Y G +E++A+ + + +Y S +
Sbjct: 263 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINT- 308
Query: 258 KEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
+G + I +SYHR+ HYNSV+
Sbjct: 309 ---FHGIHQNEDEPIRVSYHRNI-----HYNSVV 334
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 136 KLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPF 195
+L LGL + ++ DG+CL+RA+ DQL S N + RQ YM DF PF
Sbjct: 59 QLQALGLKLREVPGDGNCLFRALGDQLEGHS-----RNHLKHRQETVDYMIKQREDFEPF 113
Query: 196 YLSENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVE 255
E+ I FE + + + G + A + +++I+ + P +
Sbjct: 114 V--EDDIP----------FEKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQ 161
Query: 256 MGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 293
+ G SS + ++Y GEHY+SV I
Sbjct: 162 I-----RGTEKSSVRELHIAYR-----YGEHYDSVRRI 189
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 141 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDH---SSDFLPFYL 197
G + +K DG CL+RAV DQ+ Y Q + ++V + D+ ++D+ Y+
Sbjct: 212 GFIIKQMKEDGACLFRAVADQV---------YGDQDMHEVVRKHCMDYLMKNADYFSNYV 262
Query: 198 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMI--YSGSFPDVE 255
+E+ F Y G +E++A+ + + + YS VE
Sbjct: 263 TED-------------FTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVE 309
Query: 256 MGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
+ +G + I +SYHR+ HYNSV+
Sbjct: 310 PINTF-HGIHQNEDEPIRVSYHRNI-----HYNSVV 339
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 38/153 (24%)
Query: 147 IKPDGHCLYRAVE-----DQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENM 201
I PDG+CLYRAV DQ H ++LR+ Y+ DH F P L E
Sbjct: 287 IIPDGNCLYRAVSKTVYGDQSLH----------RELREQTVHYIADHLDHFSP--LIEGD 334
Query: 202 IGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS---FPDVEMGK 258
+GE + AW G EL A+ L +I + +G P V
Sbjct: 335 VGE------------FIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMI 382
Query: 259 EYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
Y G DS SI LS+ + HY++V
Sbjct: 383 HYL-GPEDSLRPSIWLSWLSNG-----HYDAVF 409
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 38/153 (24%)
Query: 147 IKPDGHCLYRAVE-----DQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENM 201
I PDG+CLYRAV DQ H ++LR+ Y+ DH F P L E
Sbjct: 314 IIPDGNCLYRAVSKTVYGDQSLH----------RELREQTVHYIADHLDHFSP--LIEGD 361
Query: 202 IGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGS---FPDVEMGK 258
+GE + AW G EL A+ L +I + +G P V
Sbjct: 362 VGE------------FIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVSTMI 409
Query: 259 EYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
Y G DS SI LS+ + HY++V
Sbjct: 410 HYL-GPEDSLRPSIWLSWLSNG-----HYDAVF 436
>sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana
GN=At3g57810 PE=2 SV=1
Length = 317
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 27/156 (17%)
Query: 143 TVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMI 202
++ I DG CL+R+V SG +P +++++ +A +R +D E +
Sbjct: 169 SIIGIPGDGRCLFRSVAHGFCLRSGKLAP--GEKMQRELADELRTRVAD-------EFIQ 219
Query: 203 GEESAQSQVE-RFENYCKEVESTAAWGGELELRALTHCLRKHIMIY------SGSFPDVE 255
+ + VE F+ Y +++ WGGE EL +H L+ I +Y G E
Sbjct: 220 RRQETEWFVEGDFDTYVRQIRDPHVWGGEPELFMASHVLQMPITVYMKDDKAGGLISIAE 279
Query: 256 MGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 291
G+EY G D I + Y H FG HY++++
Sbjct: 280 YGQEY---GKD---DPIRVLY--HGFG---HYDALL 304
>sp|Q9C7F1|PPR61_ARATH Putative pentatricopeptide repeat-containing protein At1g28020
OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2
Length = 566
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 111 REQRIQEEQSNIVSDRTVEDEKLEKKLGPLGLTVND-IKP-DGHCLYRAVEDQLAHLSGG 168
R++ + E+ +++ +T++D ++ K + PL D +KP D CL + + D S
Sbjct: 361 RDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWGDQMKPSDLKCLIKNLRDS-KQFSKA 419
Query: 169 ASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFEN 216
+ +Q+ Y+ D+++ YL+EN++G E A+ + FEN
Sbjct: 420 LQVSEWMGEKQVCNLYLEDYAARL---YLTENVLGLEEAE---KYFEN 461
>sp|Q8KML6|DNAK_LACSN Chaperone protein DnaK OS=Lactobacillus sanfranciscensis GN=dnaK
PE=3 SV=1
Length = 614
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 8 EISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYSSSNG 67
EI +++ E ELKKA A G+ + KAKK + E++ ++ KL ++ + G ++NG
Sbjct: 534 EIKGVKDAEEELKKAKADGNLDDMKAKKDTLNEKVQAVAVKLYQQQQSQGGEAG--AANG 591
Query: 68 NEKSNLDNLV 77
+ DN V
Sbjct: 592 DASKKDDNTV 601
>sp|Q5KWZ7|DNAK_GEOKA Chaperone protein DnaK OS=Geobacillus kaustophilus (strain HTA426)
GN=dnaK PE=1 SV=1
Length = 607
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 8 EISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAKELASLGYSSSNG 67
EI + Q+ + LK A K + + KK ++E + +LS KL E+ AK+ S G
Sbjct: 530 EIKKAQDAKEALKAALEKNDIDDIRKKKDALQEAVQQLSIKLYEQAAKQAQSAGSQGGAA 589
Query: 68 NEKSNLDNLVKA 79
N K DN+V A
Sbjct: 590 NHK---DNVVDA 598
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,870,225
Number of Sequences: 539616
Number of extensions: 4246542
Number of successful extensions: 26658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 850
Number of HSP's that attempted gapping in prelim test: 23702
Number of HSP's gapped (non-prelim): 3022
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)