BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022676
MIAQSLTVNPFPNSFLKCHRPNPGFLSSSVSLNVSRWNEAMSMRLSRERTVGTTVLASKE
QSSSYNSEKKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNEN
VENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFR
KGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIY
THAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVGTEIM

High Scoring Gene Products

Symbol, full name Information P value
AT2G32500 protein from Arabidopsis thaliana 1.1e-78
AT2G31670 protein from Arabidopsis thaliana 1.1e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022676
        (293 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060231 - symbol:AT2G32500 "AT2G32500" species...   791  1.1e-78   1
TAIR|locus:2065949 - symbol:AT2G31670 "AT2G31670" species...   159  1.1e-09   1


>TAIR|locus:2060231 [details] [associations]
            symbol:AT2G32500 "AT2G32500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685 InterPro:IPR011008
            SUPFAM:SSF54909 InterPro:IPR013097 Pfam:PF07876 SMART:SM00886
            PROSITE:PS51502 EMBL:BT024501 EMBL:AK176883 IPI:IPI00548697
            RefSeq:NP_180809.2 UniGene:At.38065 ProteinModelPortal:Q67XD6
            STRING:Q67XD6 PRIDE:Q67XD6 EnsemblPlants:AT2G32500.1 GeneID:817811
            KEGG:ath:AT2G32500 TAIR:At2g32500 HOGENOM:HOG000030484
            InParanoid:Q67XD6 OMA:LIVQSTQ PhylomeDB:Q67XD6
            ProtClustDB:CLSN2679977 Genevestigator:Q67XD6 Uniprot:Q67XD6
        Length = 276

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 152/253 (60%), Positives = 193/253 (76%)

Query:    41 MSMRLSRERTVGTTVLASKEQSSSYNSEKKRKVVEHICLLKAKKDLSEEEEKDMLDYLYT 100
             M +   R +T   T  A+ +Q +S  S K RKVVEH+CLLKAK+ LSEE EKDMLDYLYT
Sbjct:    24 MFVHQCRTKTPRVTFCAADDQIASSKSNKTRKVVEHVCLLKAKEGLSEEVEKDMLDYLYT 83

Query:   101 SQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEHVMPYCH 160
             +QYQM GIVAIS+G I + N E +TH ++MRFQ+KE L KFYENPF+ KVL E+V P+CH
Sbjct:    84 TQYQMRGIVAISVGCIGDRNNEYFTHALYMRFQKKEDLDKFYENPFFLKVLNEYVTPFCH 143

Query:   161 GLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEF 220
             GL NVDYE+EVEDDIL IFRKGE++N+G EFVLLI+F +SA     +DA++S  +LT+  
Sbjct:   144 GLTNVDYESEVEDDILAIFRKGEEYNYGEEFVLLITFAKSASEKNTKDAMDSFAQLTSSL 203

Query:   221 PSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLP 280
             PSLIVQSTQGSNFN SS+ +THA V+R RS +A E+F    +YK+MW ++F+P I     
Sbjct:   204 PSLIVQSTQGSNFNGSSKEFTHAAVVRFRSFDAMEIFFEGREYKDMWRSQFEPFIEKSEA 263

Query:   281 VHFSVDPVGTEIM 293
             +HFSVDPVGT++M
Sbjct:   264 LHFSVDPVGTDVM 276


>TAIR|locus:2065949 [details] [associations]
            symbol:AT2G31670 "AT2G31670" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] [GO:0000394 "RNA splicing, via endonucleolytic
            cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
            biosynthetic process" evidence=RCA] [GO:0019344 "cysteine
            biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
            biosynthetic process" evidence=RCA] GO:GO:0009570 EMBL:CP002685
            GO:GO:0005777 EMBL:AC007071 InterPro:IPR011008 SUPFAM:SSF54909
            InterPro:IPR013097 Pfam:PF07876 SMART:SM00886 PROSITE:PS51502
            UniGene:At.14359 EMBL:BT010905 EMBL:BT011004 IPI:IPI00524687
            PIR:F84723 RefSeq:NP_180725.1 ProteinModelPortal:Q9SIP1 SMR:Q9SIP1
            PRIDE:Q9SIP1 ProMEX:Q9SIP1 EnsemblPlants:AT2G31670.1 GeneID:817723
            KEGG:ath:AT2G31670 TAIR:At2g31670 HOGENOM:HOG000242441
            InParanoid:Q9SIP1 OMA:AKSEITG PhylomeDB:Q9SIP1
            ProtClustDB:CLSN2682964 ArrayExpress:Q9SIP1 Genevestigator:Q9SIP1
            Uniprot:Q9SIP1
        Length = 263

 Score = 159 (61.0 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 56/250 (22%), Positives = 111/250 (44%)

Query:    40 AMSMRLSRERTVGTTVLASKEQSSSYNSEKKRKVVEHICLLKAKKDLSEEEEKDMLDYLY 99
             A ++  ++   +   +L  +  S   +S  + +++EHI L K K D    +   M++ L 
Sbjct:    15 AFTISTTKHSRINLRLLPRRSFSVMSSSTPQSQIIEHIVLFKTKDDADSTKITSMINNLN 74

Query:   100 TSQY--QMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEHVMP 157
                Y  Q+  I    L RIS+     +TH +  R++ KE L  +  +P + +V+KE V+P
Sbjct:    75 ALAYLDQVLHISTSPLHRISSATA--FTHVLHSRYESKEDLASYAAHPDHVRVVKESVLP 132

Query:   158 YCHGLMNVDYETE-VEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRL 216
              C  +M VD+  + +   + P+   G      V  + L+   +        +    +K L
Sbjct:   133 ICDDIMAVDWIADRIPGTVAPL--PGS-----VAKLTLLKLKEDVADEAKSEITGVIKGL 185

Query:   217 TAEFPSLIVQSTQGSNFNLS-SEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPII 275
             + +FP  I Q T G NF+ + ++ ++ A +   + +   E      +      +K +  +
Sbjct:   186 SEKFPG-IDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVRDYV 244

Query:   276 RTQLPVHFSV 285
              + + V F V
Sbjct:   245 DSTIVVEFVV 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.382    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      293       293   0.00091  115 3  11 22  0.38    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.90u 0.13s 26.03t   Elapsed:  00:00:02
  Total cpu time:  25.90u 0.13s 26.03t   Elapsed:  00:00:02
  Start:  Fri May 10 11:39:32 2013   End:  Fri May 10 11:39:34 2013

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