BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 022676
         (293 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5JER1|Y1890_PYRKO Uncharacterized protein TK1890 OS=Pyrococcus kodakaraensis (strain
           ATCC BAA-918 / JCM 12380 / KOD1) GN=TK1890 PE=4 SV=1
          Length = 180

 Score = 37.0 bits (84), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 155 VMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLK 214
           V PYC G+ + D + ++   IL   RK E+   GV+ +   +     +G P E+ +++ K
Sbjct: 90  VGPYCGGIWDEDKKEKLRKAILGALRKAEE--LGVKTIAFPAVSAGIYGCPLEEVVKTFK 147

Query: 215 RLTAEF 220
            +  EF
Sbjct: 148 EVIDEF 153


>sp|O59182|Y1513_PYRHO Uncharacterized protein PH1513 OS=Pyrococcus horikoshii (strain
           ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
           GN=PH1513 PE=4 SV=1
          Length = 190

 Score = 35.8 bits (81), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 104 QMGGIVAISLGRISNENVENYTHGVFMRFQRK------EHL-------VKFYENPFYSKV 150
           + GG VA ++ + ++ +V  YT       +R+      EH        +K  EN    K 
Sbjct: 29  EHGGGVAYAIAKAASGDVSEYTRISKEEMRRQLGKDWIEHGEVVVTPPMKLKENGV--KY 86

Query: 151 LKEHVMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDAL 210
           +   V PYC G+ + D E +++  IL   +K ++   GV+ +   +     +G P ++ +
Sbjct: 87  VIHTVGPYCGGVWSKDKEEKLKLAILGALKKADE--LGVKSIAFPAISAGIYGCPLKEVV 144

Query: 211 ESLKRLTAEF 220
            + K +  EF
Sbjct: 145 RTFKEVVKEF 154


>sp|B3QZ51|METX_CHLT3 Homoserine O-acetyltransferase OS=Chloroherpeton thalassium (strain
           ATCC 35110 / GB-78) GN=metX PE=3 SV=1
          Length = 378

 Score = 35.0 bits (79), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 159 CHGLMNVDYETEVEDDIL--PIFRKGEDFNFGVEFVLLISFIQSAFG--GPAEDALESLK 214
           CH L         + DI   P+F +G+ F+   +F++  + + S +G  GPA    E+ K
Sbjct: 57  CHALTG-----SADADIWWAPLFGEGKTFDETKDFIVCSNVLGSCYGTTGPASINPETGK 111

Query: 215 RLTAEFPSLIVQ 226
           R   +FPS  ++
Sbjct: 112 RFGPDFPSFTIR 123


>sp|Q9V0Y3|Y656_PYRAB Uncharacterized protein PYRAB06560 OS=Pyrococcus abyssi (strain GE5
           / Orsay) GN=PYRAB06560 PE=4 SV=2
          Length = 183

 Score = 32.7 bits (73), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 155 VMPYCHGLMNVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLK 214
           V PYC G  + D   ++E  IL   +K ++   GV  +   +     +G P E+ +++ K
Sbjct: 88  VGPYCGGKWDEDKRKKLELAILGALKKADE--LGVRSIAFPAISAGIYGCPLEEVVKTFK 145

Query: 215 RLTAEF 220
            +  EF
Sbjct: 146 LVVNEF 151


>sp|Q9M007|CHX27_ARATH Cation/H(+) antiporter 27 OS=Arabidopsis thaliana GN=CHX27 PE=2
           SV=2
          Length = 767

 Score = 31.2 bits (69), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 16/133 (12%)

Query: 40  AMSMRLSRERTVGTTVLASKEQSSSYNSEKKRKVVEHICLLKAKKDL-----SEEEEKDM 94
           AM M  +   T+   ++    Q+ S  +  KR+ V+H C ++A   +     + E  + +
Sbjct: 419 AMVMSATVNSTIFIVIVKKLYQTMSKRNPYKRRTVQH-CRVEAPLRILTCFRNREAVRPV 477

Query: 95  LDYLYTSQYQMG---GIVAISLGRISNENVENYTHGV-----FMRFQRKEHLVKFYENPF 146
           LD +  S+  +G    + A++L  ++N ++    H       F+   R++ +VK + N  
Sbjct: 478 LDLVELSRPAIGSPLSVFAVNLEELNNHSLPLLIHHTQEISPFLVPSRRDQIVKAFHN-- 535

Query: 147 YSKVLKEHVMPYC 159
           + K  +E V+  C
Sbjct: 536 FEKTNQETVLIEC 548


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,240,152
Number of Sequences: 539616
Number of extensions: 3973054
Number of successful extensions: 12100
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 12098
Number of HSP's gapped (non-prelim): 14
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)