Query 022676
Match_columns 293
No_of_seqs 230 out of 803
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:18:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022676.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022676hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qyc_A Ferredoxin-like protein 100.0 2.5E-28 8.4E-33 194.5 13.0 100 188-289 4-103 (103)
2 2qyc_A Ferredoxin-like protein 100.0 6.1E-28 2.1E-32 192.2 13.7 99 72-171 3-101 (103)
3 1tr0_A Stable protein 1; plant 99.9 2.3E-27 7.8E-32 190.4 13.6 100 69-169 4-107 (108)
4 1q4r_A Protein AT3G17210; cent 99.9 2.1E-27 7.1E-32 192.1 12.3 103 70-173 7-111 (112)
5 3bde_A MLL5499 protein; stress 99.9 5.4E-27 1.9E-31 192.9 12.4 100 69-169 16-115 (120)
6 3bgu_A Ferredoxin-like protein 99.9 1.3E-26 4.3E-31 189.4 12.9 103 65-168 13-115 (116)
7 1tr0_A Stable protein 1; plant 99.9 1.5E-26 5.3E-31 185.5 12.3 96 188-285 8-107 (108)
8 3fmb_A Dimeric protein of unkn 99.9 2E-26 6.9E-31 188.9 12.8 98 70-169 17-118 (118)
9 3bn7_A Ferredoxin-like protein 99.9 2.5E-26 8.7E-31 188.7 13.2 99 69-169 16-119 (120)
10 1q4r_A Protein AT3G17210; cent 99.9 1.8E-26 6.1E-31 186.6 11.1 102 185-288 7-110 (112)
11 3bgu_A Ferredoxin-like protein 99.9 1.7E-26 5.7E-31 188.6 10.5 98 186-285 19-116 (116)
12 3bb5_A Stress responsive alpha 99.9 5E-26 1.7E-30 187.1 11.8 100 69-169 16-121 (121)
13 3bde_A MLL5499 protein; stress 99.9 1E-25 3.6E-30 185.2 12.6 98 187-286 19-116 (120)
14 3bn7_A Ferredoxin-like protein 99.9 1.1E-25 3.8E-30 184.9 12.4 98 185-285 17-119 (120)
15 3bb5_A Stress responsive alpha 99.9 9.8E-26 3.3E-30 185.4 10.7 98 186-285 18-121 (121)
16 3fmb_A Dimeric protein of unkn 99.9 2.1E-25 7E-30 182.9 11.5 95 188-285 20-118 (118)
17 1rjj_A Expressed protein; beta 99.9 3.5E-25 1.2E-29 178.6 11.2 99 72-174 4-105 (111)
18 1rjj_A Expressed protein; beta 99.9 6.7E-25 2.3E-29 176.9 12.3 95 188-287 5-102 (111)
19 3f44_A Putative monooxygenase; 98.7 1.1E-06 3.9E-11 78.2 19.0 205 72-289 5-212 (220)
20 3mcs_A Putative monooxygenase; 98.1 0.00072 2.5E-08 60.2 20.9 195 72-284 5-203 (219)
21 3kg0_A Snoab; polyketide, anth 97.5 0.0025 8.5E-08 52.0 13.0 84 70-159 20-103 (128)
22 3kkf_A Putative antibiotic bio 97.4 0.0024 8.2E-08 49.5 11.9 98 71-172 3-100 (105)
23 2fb0_A Conserved hypothetical 97.3 0.0065 2.2E-07 45.4 12.3 86 72-162 3-88 (94)
24 2gff_A LSRG protein; dimeric a 97.2 0.0058 2E-07 47.1 11.7 85 73-162 1-85 (106)
25 1x7v_A PA3566 protein, APC5058 97.2 0.011 3.7E-07 44.5 12.9 88 72-164 5-92 (99)
26 3kkf_A Putative antibiotic bio 97.1 0.0062 2.1E-07 47.1 11.5 100 186-291 3-103 (105)
27 1y0h_A Hypothetical protein RV 97.1 0.005 1.7E-07 46.7 10.6 85 72-162 4-88 (102)
28 1iuj_A Hypothetical protein TT 97.0 0.0057 2E-07 46.6 10.1 77 73-153 1-77 (106)
29 1q8b_A Protein YJCS; structura 97.0 0.01 3.6E-07 45.9 11.6 87 72-162 12-98 (105)
30 2omo_A DUF176; structural geno 96.9 0.015 5.1E-07 46.7 12.3 90 69-163 19-108 (124)
31 3gz7_A Putative antibiotic bio 96.9 0.019 6.6E-07 45.7 12.8 90 72-166 19-109 (115)
32 2fb0_A Conserved hypothetical 96.9 0.013 4.3E-07 43.8 11.2 88 186-279 2-89 (94)
33 3e8o_A Uncharacterized protein 96.9 0.0094 3.2E-07 47.4 10.7 101 187-293 18-118 (119)
34 2bbe_A Hypothetical protein SO 96.9 0.014 4.8E-07 45.1 11.4 86 72-162 12-98 (108)
35 3bm7_A Protein of unknown func 96.9 0.019 6.5E-07 45.2 12.1 92 71-167 18-110 (115)
36 1tuv_A Protein YGIN; menadione 96.9 0.015 5E-07 45.9 11.4 95 188-284 1-101 (114)
37 3e8o_A Uncharacterized protein 96.8 0.025 8.5E-07 44.9 12.5 88 69-161 15-102 (119)
38 1tuv_A Protein YGIN; menadione 96.8 0.024 8.1E-07 44.7 12.3 89 73-162 1-95 (114)
39 2omo_A DUF176; structural geno 96.7 0.023 7.9E-07 45.5 11.7 98 187-290 22-121 (124)
40 4dpo_A Conserved protein; stru 96.7 0.018 6.1E-07 45.9 10.9 85 72-161 24-108 (119)
41 2pd1_A Hypothetical protein; u 96.7 0.026 8.9E-07 42.9 11.3 83 72-161 4-86 (104)
42 2gff_A LSRG protein; dimeric a 96.7 0.019 6.4E-07 44.2 10.5 84 188-277 1-84 (106)
43 1q8b_A Protein YJCS; structura 96.6 0.023 7.9E-07 43.9 10.8 88 188-280 13-100 (105)
44 1x7v_A PA3566 protein, APC5058 96.6 0.043 1.5E-06 41.2 12.1 90 188-283 6-95 (99)
45 2pd1_A Hypothetical protein; u 96.6 0.028 9.6E-07 42.7 11.1 82 188-277 5-86 (104)
46 3gz7_A Putative antibiotic bio 96.5 0.043 1.5E-06 43.6 11.7 90 186-281 18-108 (115)
47 1y0h_A Hypothetical protein RV 96.4 0.027 9.3E-07 42.5 10.0 84 187-277 4-87 (102)
48 3f44_A Putative monooxygenase; 96.4 0.023 7.9E-07 50.1 10.9 104 69-182 112-215 (220)
49 1iuj_A Hypothetical protein TT 96.4 0.023 7.7E-07 43.2 9.3 91 188-284 1-96 (106)
50 3kg0_A Snoab; polyketide, anth 96.4 0.026 9E-07 45.8 10.1 82 188-276 23-104 (128)
51 2ril_A Antibiotic biosynthesis 96.4 0.029 9.8E-07 42.7 9.7 71 72-144 4-74 (99)
52 2ftr_A BH0200; structural geno 96.3 0.015 5.2E-07 45.7 8.3 80 72-153 7-89 (108)
53 2jdj_A HAPK, REDY-like protein 96.3 0.046 1.6E-06 43.5 10.9 80 76-155 4-84 (105)
54 2zdo_A Heme-degrading monooxyg 96.2 0.011 3.9E-07 45.8 6.9 77 73-152 4-80 (109)
55 3bm7_A Protein of unknown func 96.2 0.056 1.9E-06 42.5 11.0 89 188-282 20-109 (115)
56 3hf5_A 4-methylmuconolactone m 96.2 0.034 1.2E-06 44.7 9.6 83 70-152 7-98 (116)
57 2bbe_A Hypothetical protein SO 96.1 0.057 2E-06 41.6 10.5 86 188-278 13-98 (108)
58 1sqe_A Hypothetical protein PG 96.0 0.015 5.3E-07 45.0 6.7 78 72-152 1-78 (109)
59 4dpo_A Conserved protein; stru 96.0 0.055 1.9E-06 43.0 10.0 85 188-278 25-109 (119)
60 4hl9_A Antibiotic biosynthesis 95.9 0.061 2.1E-06 43.0 10.1 93 71-168 21-113 (118)
61 2go8_A Hypothetical protein YQ 95.7 0.023 7.7E-07 46.3 6.7 75 71-152 11-85 (122)
62 4hl9_A Antibiotic biosynthesis 95.7 0.057 1.9E-06 43.2 8.9 92 186-283 21-112 (118)
63 4dn9_A Antibiotic biosynthesis 95.6 0.13 4.4E-06 41.2 10.6 88 70-165 20-107 (122)
64 3tvz_A Putative uncharacterize 95.5 0.073 2.5E-06 45.4 9.3 79 70-153 68-146 (172)
65 3hf5_A 4-methylmuconolactone m 95.1 0.13 4.5E-06 41.2 9.1 91 188-280 10-109 (116)
66 1tz0_A Hypothetical protein; s 95.0 0.042 1.4E-06 43.4 5.9 78 72-152 6-83 (114)
67 3hx9_A Protein RV3592; DI-heme 95.0 0.055 1.9E-06 43.8 6.6 72 73-148 2-73 (124)
68 4dn9_A Antibiotic biosynthesis 94.8 0.29 1E-05 39.0 10.5 85 188-281 23-107 (122)
69 2zdo_A Heme-degrading monooxyg 94.7 0.13 4.5E-06 39.6 7.9 78 187-268 3-80 (109)
70 3fj2_A Monooxygenase-like prot 94.6 0.37 1.3E-05 41.8 11.4 108 39-151 31-158 (186)
71 2go8_A Hypothetical protein YQ 94.1 0.13 4.3E-06 41.8 6.8 73 191-269 14-86 (122)
72 2ftr_A BH0200; structural geno 93.8 0.24 8.1E-06 38.7 7.9 87 187-277 7-96 (108)
73 3fj2_A Monooxygenase-like prot 93.6 0.63 2.2E-05 40.3 10.9 127 126-267 21-158 (186)
74 1sqe_A Hypothetical protein PG 93.0 0.15 5.1E-06 39.2 5.4 77 188-268 2-78 (109)
75 3hx9_A Protein RV3592; DI-heme 92.8 0.24 8.1E-06 40.0 6.5 93 187-285 1-94 (124)
76 3fgv_A Uncharacterized protein 92.7 0.38 1.3E-05 37.7 7.4 82 77-166 16-101 (106)
77 1lq9_A Actva-ORF6 monooxygenas 92.5 0.26 9.1E-06 38.9 6.3 82 73-162 9-98 (112)
78 2ril_A Antibiotic biosynthesis 91.9 1.2 4E-05 33.5 9.2 71 187-260 4-74 (99)
79 3lo3_A Uncharacterized conserv 91.1 1.3 4.3E-05 33.9 8.6 67 87-154 15-82 (94)
80 3mcs_A Putative monooxygenase; 89.7 3.3 0.00011 36.4 11.2 95 70-169 110-204 (219)
81 3fgv_A Uncharacterized protein 88.5 1.2 4E-05 34.9 6.6 72 204-283 26-102 (106)
82 1tz0_A Hypothetical protein; s 88.5 0.58 2E-05 36.7 4.9 78 187-268 6-83 (114)
83 3hhl_A RPA0582; alpha-beta-bar 87.9 2.4 8.1E-05 35.0 8.5 96 69-165 20-127 (143)
84 3hhl_A RPA0582; alpha-beta-bar 87.5 2.3 7.8E-05 35.1 8.1 51 239-290 86-136 (143)
85 1lq9_A Actva-ORF6 monooxygenas 86.9 0.99 3.4E-05 35.5 5.3 83 189-280 10-100 (112)
86 3bf4_A Ethyl TERT-butyl ether 86.8 5 0.00017 32.4 9.6 86 187-277 19-111 (127)
87 3lo3_A Uncharacterized conserv 86.7 2 6.8E-05 32.7 6.8 71 192-268 8-80 (94)
88 3tvz_A Putative uncharacterize 86.5 1.5 5.1E-05 37.1 6.6 130 127-272 8-148 (172)
89 3bf4_A Ethyl TERT-butyl ether 85.2 1.4 4.9E-05 35.7 5.6 80 70-153 17-104 (127)
90 2fiu_A Conserved hypothetical 81.6 1.8 6E-05 33.4 4.5 40 242-281 55-94 (99)
91 2fiu_A Conserved hypothetical 81.4 6.1 0.00021 30.3 7.6 69 87-155 16-84 (99)
92 2jdj_A HAPK, REDY-like protein 81.3 14 0.00047 29.2 9.6 78 190-268 3-81 (105)
93 2cvi_A 75AA long hypothetical 79.6 15 0.0005 26.4 8.9 56 73-142 1-56 (83)
94 2zbc_A 83AA long hypothetical 79.6 10 0.00036 26.8 8.0 56 73-142 1-56 (83)
95 2djw_A Probable transcriptiona 79.5 8.7 0.0003 28.2 7.7 57 73-143 1-57 (92)
96 4ae5_A Signal transduction pro 75.3 12 0.00041 31.6 8.3 45 101-149 93-137 (167)
97 3i4p_A Transcriptional regulat 66.7 34 0.0012 27.7 9.0 59 73-142 62-120 (162)
98 2hiq_A Hypothetical protein YD 64.3 52 0.0018 26.1 9.4 73 75-154 11-83 (113)
99 2p5v_A Transcriptional regulat 62.8 31 0.001 27.8 8.0 58 73-142 69-126 (162)
100 1vq3_A Phosphoribosylformylgly 56.1 32 0.0011 26.4 6.5 43 72-116 14-56 (94)
101 2cg4_A Regulatory protein ASNC 47.9 99 0.0034 24.3 9.1 57 73-142 67-123 (152)
102 2cfx_A HTH-type transcriptiona 46.3 1E+02 0.0035 24.0 8.5 57 72-142 63-119 (144)
103 2e1c_A Putative HTH-type trans 43.3 84 0.0029 25.7 7.7 57 72-142 85-141 (171)
104 2cyy_A Putative HTH-type trans 43.2 93 0.0032 24.5 7.7 57 72-142 65-121 (151)
105 2dbb_A Putative HTH-type trans 41.6 1.2E+02 0.0043 23.6 8.3 56 73-142 68-124 (151)
106 2pn6_A ST1022, 150AA long hypo 39.5 1E+02 0.0036 24.0 7.5 58 73-142 62-119 (150)
107 2hiq_A Hypothetical protein YD 37.8 1.1E+02 0.0036 24.3 7.0 60 193-261 14-76 (113)
108 4ae5_A Signal transduction pro 37.2 88 0.003 26.1 6.9 123 128-268 4-140 (167)
109 2ia0_A Putative HTH-type trans 36.9 1E+02 0.0035 25.2 7.2 57 75-142 77-137 (171)
110 1i1g_A Transcriptional regulat 35.1 1.4E+02 0.0048 22.8 7.5 58 71-142 61-118 (141)
111 1t4a_A PURS; tetramer, complex 34.0 1.1E+02 0.0039 22.3 6.3 42 73-116 1-42 (84)
112 1gtd_A MTH169; synthetase, FGA 33.6 97 0.0033 22.8 5.9 41 73-116 2-42 (85)
113 2asy_A Protein YDHR precursor; 31.3 64 0.0022 26.0 4.7 73 75-154 26-98 (123)
114 2cvi_A 75AA long hypothetical 30.8 1.4E+02 0.0048 21.0 6.4 57 188-259 1-57 (83)
115 2zw2_A Putative uncharacterize 26.6 1.3E+02 0.0044 22.5 5.6 42 73-116 5-46 (92)
116 2p5v_A Transcriptional regulat 25.1 2.5E+02 0.0086 22.1 7.7 58 188-258 69-126 (162)
117 2w25_A Probable transcriptiona 22.4 2.7E+02 0.0093 21.5 7.4 57 72-142 65-122 (150)
118 4dx5_A Acriflavine resistance 21.9 7E+02 0.024 26.1 13.9 61 77-138 573-637 (1057)
119 2asy_A Protein YDHR precursor; 21.6 1.6E+02 0.0055 23.6 5.4 50 207-261 39-91 (123)
120 1vq3_A Phosphoribosylformylgly 21.2 2E+02 0.007 21.7 5.8 42 188-232 15-56 (94)
121 2yx5_A UPF0062 protein MJ1593; 20.4 80 0.0027 23.1 3.2 41 73-115 1-41 (83)
No 1
>2qyc_A Ferredoxin-like protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 1.90A {Bordetella bronchiseptica RB50}
Probab=99.95 E-value=2.5e-28 Score=194.48 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=96.5
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||+||||||||+++++++++++++.|++|+++||+ |+++++|.|.+++++||||+++++|+|.|||++|+.||.|+++
T Consensus 4 Mi~HiVlfk~k~~~~~~~~~~~~~~l~~L~~~ip~-i~~~~~G~~~~~~~~~~~~~~~~~F~s~e~l~~Y~~hP~H~~~- 81 (103)
T 2qyc_A 4 MFLHVVMMEFDDGIDAGFFRTVDEYVARMKRECDG-LLLYHFGENVAARSQGYTHATSSAFVDAAAHDAYQVCPAHVAM- 81 (103)
T ss_dssp EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHSTT-EEEEEEEECCCTTCTTCCEEEEEEESSHHHHHHHTTCHHHHHH-
T ss_pred eEEEEEEEEECCCCCHHHHHHHHHHHHHhhhcCCC-eEEEEECCCCCCCCCCccEEEEEEECCHHHHHHHhCCHHHHHH-
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999999985
Q ss_pred HhhhhccccceeEEeeEeCCCC
Q 022676 268 SNKFQPIIRTQLPVHFSVDPVG 289 (293)
Q Consensus 268 ~~~v~p~~e~i~vvDy~v~~~g 289 (293)
++.++|++++++++||++++.|
T Consensus 82 ~~~~~~~~~~~~v~D~~~~~~~ 103 (103)
T 2qyc_A 82 KAFMGPRIKRVVVYDGEVPAIG 103 (103)
T ss_dssp HHHHGGGEEEEEEEEEEEECC-
T ss_pred HHHHHHHhcCcEEEEEecCCcC
Confidence 8999999999999999998875
No 2
>2qyc_A Ferredoxin-like protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 1.90A {Bordetella bronchiseptica RB50}
Probab=99.95 E-value=6.1e-28 Score=192.19 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=94.0
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
+||+||||||||+++++++++++++.|.+|+++||||+++++|+|.+++++||||+|+++|+|+|||++|+.||+|+++
T Consensus 3 ~Mi~HiVlfk~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~~~~~~F~s~e~l~~Y~~hP~H~~~- 81 (103)
T 2qyc_A 3 TMFLHVVMMEFDDGIDAGFFRTVDEYVARMKRECDGLLLYHFGENVAARSQGYTHATSSAFVDAAAHDAYQVCPAHVAM- 81 (103)
T ss_dssp EEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHSTTEEEEEEEECCCTTCTTCCEEEEEEESSHHHHHHHTTCHHHHHH-
T ss_pred ceEEEEEEEEECCCCCHHHHHHHHHHHHHhhhcCCCeEEEEECCCCCCCCCCccEEEEEEECCHHHHHHHhCCHHHHHH-
Confidence 4999999999999999999999999999999999999999999999877789999999999999999999999999998
Q ss_pred HHhhccceeeeeeeeeeccc
Q 022676 152 KEHVMPYCHGLMNVDYETEV 171 (293)
Q Consensus 152 ~~~i~p~~e~~~vvDye~~v 171 (293)
+++++|++++++++||+.+.
T Consensus 82 ~~~~~~~~~~~~v~D~~~~~ 101 (103)
T 2qyc_A 82 KAFMGPRIKRVVVYDGEVPA 101 (103)
T ss_dssp HHHHGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHhcCcEEEEEecCC
Confidence 56789999999999998753
No 3
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=99.95 E-value=2.3e-27 Score=190.40 Aligned_cols=100 Identities=16% Similarity=0.244 Sum_probs=93.5
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCC----CCCCccEEEEEEECCHHHHHhhccC
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNE----NVENYTHGVFMRFQRKEHLVKFYEN 144 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~----~~~gythaL~s~F~s~edL~~Y~~H 144 (293)
++++||+||||||||+++++++++++.+.|.+|+++||||+++++|++.++ .++||||+|+++|+|+|||++|+.|
T Consensus 4 ~~~~mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~h 83 (108)
T 1tr0_A 4 RTPKLVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTDLGMESAELNRGYTHAFESTFESKSGLQEYLDS 83 (108)
T ss_dssp CCCCCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCTTCCEEEEEECCSCSCTTTTTTCCEEEEEEESSHHHHHHHHTC
T ss_pred CCCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCceEEEEEccCCCccccccCCCccEEEEEEECCHHHHHHHhCC
Confidence 466799999999999999999999999999999999999999999999984 3589999999999999999999999
Q ss_pred cchHHHHHHhhccceeeeeeeeeec
Q 022676 145 PFYSKVLKEHVMPYCHGLMNVDYET 169 (293)
Q Consensus 145 P~H~~vv~~~i~p~~e~~~vvDye~ 169 (293)
|+|+++++ .++|++++++++||+.
T Consensus 84 P~H~~~~~-~~~~~~~~~~v~D~~~ 107 (108)
T 1tr0_A 84 AALAAFAE-GFLPTLSQRLVIDYFL 107 (108)
T ss_dssp HHHHHHHH-HHGGGEEEEEEEEEEC
T ss_pred HHHHHHHH-HHHHHhCCcEEEEEEe
Confidence 99999985 5689999999999974
No 4
>1q4r_A Protein AT3G17210; center for eukaryotic structural genom structural genomics, protein structure initiative, CESG, UN function; 1.90A {Arabidopsis thaliana} SCOP: d.58.4.4 PDB: 1q53_A 2q3p_A
Probab=99.95 E-value=2.1e-27 Score=192.14 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=94.0
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCC--CCCCccEEEEEEECCHHHHHhhccCcch
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNE--NVENYTHGVFMRFQRKEHLVKFYENPFY 147 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~--~~~gythaL~s~F~s~edL~~Y~~HP~H 147 (293)
++.||+||||||||+++++++++++++.|.+|+++||||+++++|++.++ .++||||+|+++|+|+|||++|+.||+|
T Consensus 7 ~~~mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~hP~H 86 (112)
T 1q4r_A 7 AKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAH 86 (112)
T ss_dssp ---CEEEEEEEEECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHHHSHHH
T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHhhhCCceEEEEEccCCCccccCCCccEEEEEEECCHHHHHHHhCCHHH
Confidence 56699999999999999999999999999999999999999999999986 3589999999999999999999999999
Q ss_pred HHHHHHhhccceeeeeeeeeecccCC
Q 022676 148 SKVLKEHVMPYCHGLMNVDYETEVED 173 (293)
Q Consensus 148 ~~vv~~~i~p~~e~~~vvDye~~v~~ 173 (293)
+++++ .++|++++++++||+.++..
T Consensus 87 ~~~~~-~~~~~~~~~~v~D~~~~~~~ 111 (112)
T 1q4r_A 87 VEFAT-IFLGSLDKVLVIDYKPTSVS 111 (112)
T ss_dssp HHHHH-HHHHTEEEEEEEEECCCCSC
T ss_pred HHHHH-HHHHHhcCcEEEeeeccccc
Confidence 99986 46799999999999987754
No 5
>3bde_A MLL5499 protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; 1.79A {Mesorhizobium loti}
Probab=99.94 E-value=5.4e-27 Score=192.89 Aligned_cols=100 Identities=16% Similarity=0.286 Sum_probs=93.4
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
.++.||+||||||||++++++++++++++|++|+++||||+++++|+|.+++++ |||+|+++|+|+|||++|+.||+|+
T Consensus 16 ~~~~mI~HIVlfklK~~~~~e~~~~~~~~l~~L~~~Ip~I~~~~vG~~~~~~~~-~d~~l~~~F~s~edl~~Y~~HP~H~ 94 (120)
T 3bde_A 16 YFQGMIRHTVVFTLKHASHSLEEKRFLVDAKKILSAIRGVTHFEQLRQISPKID-YHFGFSMEFADQAAYTRYNDHPDHV 94 (120)
T ss_dssp --CCCEEEEEEEEESSCTTCHHHHHHHHHHHHHHHTSTTCEEEEEEECCCSSSC-CCEEEEEEESSHHHHHHHHTSHHHH
T ss_pred CCCCcEEEEEEEEECCCCCHHHHHHHHHHHHHhhccCCceEEEEEccCCCCCCC-ccEEEEEEECCHHHHHHHhCCHHHH
Confidence 467799999999999999999999999999999999999999999999987545 9999999999999999999999999
Q ss_pred HHHHHhhccceeeeeeeeeec
Q 022676 149 KVLKEHVMPYCHGLMNVDYET 169 (293)
Q Consensus 149 ~vv~~~i~p~~e~~~vvDye~ 169 (293)
++++++++|++++++++||+.
T Consensus 95 ~~v~~~~~p~~e~~~vvD~e~ 115 (120)
T 3bde_A 95 AFVRDRWVPEVEKFLEIDYVP 115 (120)
T ss_dssp HHHHHTHHHHEEEEEEEEECC
T ss_pred HHHHHHHHHHhccEEEEEEEE
Confidence 997778999999999999975
No 6
>3bgu_A Ferredoxin-like protein of unknown function; ferredoxin-like fold, stress responsive A/B barrel domain, S genomics; 1.50A {Thermobifida fusca}
Probab=99.94 E-value=1.3e-26 Score=189.36 Aligned_cols=103 Identities=13% Similarity=0.197 Sum_probs=96.5
Q ss_pred cccccCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccC
Q 022676 65 YNSEKKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYEN 144 (293)
Q Consensus 65 ~~~~~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~H 144 (293)
..+...+.||+||||||||+++++++++++++.|.+|+++||||+++++|++.+++++||||+|+++|+|+|||++|+.|
T Consensus 13 ~~~~~~~~mI~HIVlfklK~~~s~e~~~~~~~~l~~L~~~ip~i~~~~~G~~~s~~~~g~d~~l~~~F~s~edl~~Y~~h 92 (116)
T 3bgu_A 13 ENLYFQGMGIRHIALFRWNDTVTPDQVEQVITALSKLPAAIPELKNYAFGADLGLAAGNYDFAVVADLDGEDGFRAYQDH 92 (116)
T ss_dssp CCCCCSSCEEEEEEEEEECTTCCHHHHHHHHHHHHHCCCCCTTEEEEEEEECCSCSTTCCSEEEEEEEEHHHHHHHHHHS
T ss_pred hhhhcCCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCceEEEEEccCCCCCCCCeeEEEEEEECCHHHHHHHhcC
Confidence 34556778999999999999999999999999999999999999999999999877789999999999999999999999
Q ss_pred cchHHHHHHhhccceeeeeeeeee
Q 022676 145 PFYSKVLKEHVMPYCHGLMNVDYE 168 (293)
Q Consensus 145 P~H~~vv~~~i~p~~e~~~vvDye 168 (293)
|+|+++. ++++|++++++++||+
T Consensus 93 P~H~~~~-~~~~p~~~~~~v~D~~ 115 (116)
T 3bgu_A 93 PDHRAAL-AIIAPMLADRVAVQFA 115 (116)
T ss_dssp HHHHHHH-HHHGGGEEEEEEEEEE
T ss_pred HHHHHHH-HHHHHHhCceEEEEEE
Confidence 9999964 6789999999999997
No 7
>1tr0_A Stable protein 1; plant protein; 1.80A {Populus tremula} SCOP: d.58.4.4 PDB: 1si9_A
Probab=99.94 E-value=1.5e-26 Score=185.55 Aligned_cols=96 Identities=18% Similarity=0.295 Sum_probs=91.8
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCC----CCCCCceEEEEEEeCCHHHHHhhcCChhH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFN----LSSEIYTHAVVIRLRSVEAFEMFVGSSDY 263 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~S----p~~kGythafv~~F~s~eald~Y~~hp~H 263 (293)
||+||||||||+++++++++++++.|.+|+++||| |+++++|.|.+ .+++||||+++++|+|.|||++|+.||.|
T Consensus 8 mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~-i~~~~~G~~~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~hP~H 86 (108)
T 1tr0_A 8 LVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPS-MKSFNWGTDLGMESAELNRGYTHAFESTFESKSGLQEYLDSAAL 86 (108)
T ss_dssp CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCTT-CCEEEEEECCSCSCTTTTTTCCEEEEEEESSHHHHHHHHTCHHH
T ss_pred cEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCc-eEEEEEccCCCccccccCCCccEEEEEEECCHHHHHHHhCCHHH
Confidence 89999999999999999999999999999999999 99999999999 45899999999999999999999999999
Q ss_pred HHHHHhhhhccccceeEEeeEe
Q 022676 264 KEMWSNKFQPIIRTQLPVHFSV 285 (293)
Q Consensus 264 ~~~~~~~v~p~~e~i~vvDy~v 285 (293)
+++ ++.++|++++++|+||++
T Consensus 87 ~~~-~~~~~~~~~~~~v~D~~~ 107 (108)
T 1tr0_A 87 AAF-AEGFLPTLSQRLVIDYFL 107 (108)
T ss_dssp HHH-HHHHGGGEEEEEEEEEEC
T ss_pred HHH-HHHHHHHhCCcEEEEEEe
Confidence 884 578999999999999985
No 8
>3fmb_A Dimeric protein of unknown function and ferredoxi fold; YP_212648.1, stress responsive A/B barrel domain; HET: MSE; 1.85A {Bacteroides fragilis}
Probab=99.94 E-value=2e-26 Score=188.87 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=90.1
Q ss_pred CCCcEEEEEEEEecCCCCHHHH----HHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCc
Q 022676 70 KRKVVEHICLLKAKKDLSEEEE----KDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENP 145 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~----~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP 145 (293)
..+||+||||||||++++++++ +++.+.|.+|+++||||+++++|++.++ .+||||+|+++|+|+|||++|+.||
T Consensus 17 ~~~mI~HIVlfklK~~~~~~~~~~~~~~~~~~l~~L~~~IP~i~~~~vG~~~s~-~~~yd~~l~~~F~s~e~l~~Y~~HP 95 (118)
T 3fmb_A 17 FQGMVKHIVLFKLRDDVPVEEKLVVMNSFKEAIEALPAKISVIRKIEVGLNMNP-GETWNIALYSEFDNLDDVKFYATHP 95 (118)
T ss_dssp CCSCEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTGGGTCTTCSEEEEEECCCT-TCCCCEEEEEEESSHHHHHHHHHSH
T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEEeccCCC-CCCceEEEEEEECCHHHHHHHhCCH
Confidence 5679999999999999999975 4556789999999999999999999885 6799999999999999999999999
Q ss_pred chHHHHHHhhccceeeeeeeeeec
Q 022676 146 FYSKVLKEHVMPYCHGLMNVDYET 169 (293)
Q Consensus 146 ~H~~vv~~~i~p~~e~~~vvDye~ 169 (293)
+|+++++ +++|++++++++||+.
T Consensus 96 ~H~~~~~-~~~p~~e~~~vvDye~ 118 (118)
T 3fmb_A 96 EHVAAGK-ILAETKESRACVDYEF 118 (118)
T ss_dssp HHHHHHH-TTTTTEEEEEEEEEEC
T ss_pred hHHHHHH-HHHHhhcccEEEEEEC
Confidence 9999987 7899999999999983
No 9
>3bn7_A Ferredoxin-like protein; stress responsive A/B barre structural genomics, joint center for structural genomics; HET: MSE; 1.64A {Caulobacter crescentus}
Probab=99.94 E-value=2.5e-26 Score=188.72 Aligned_cols=99 Identities=12% Similarity=0.168 Sum_probs=90.9
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCC-----CCCCccEEEEEEECCHHHHHhhcc
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNE-----NVENYTHGVFMRFQRKEHLVKFYE 143 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~-----~~~gythaL~s~F~s~edL~~Y~~ 143 (293)
.++.||+||||||||++++++++++++++|++|+ +||||+++++|+|.++ .++||||+|+++|+|+|||++|+.
T Consensus 16 ~~~~mi~HIVlfklK~~~~~~~~~~~~~~l~~L~-~Ip~i~~~~vG~~~s~e~R~~~~~g~d~~l~~~F~s~edl~~Y~~ 94 (120)
T 3bn7_A 16 YFQGMLFHQVFFWLKNPGDKADRDKLIAGLKALK-AIDVIQQLHVGVPAATEKRDVVDNSYDVSELMVFKSVEDQKRYRD 94 (120)
T ss_dssp ---CCEEEEEEEEESSTTCHHHHHHHHHHHHGGG-GSTTCSEEEEECCCCCCCCTTCCCCCSEEEEEEESSHHHHHHHHT
T ss_pred CCCCcEEEEEEEEECCCCCHHHHHHHHHHHHhcc-CCCCeEEEEEccCCCcccccccCCCccEEEEEEECCHHHHHHHhC
Confidence 3567999999999999999999999999999999 8999999999999985 268999999999999999999999
Q ss_pred CcchHHHHHHhhccceeeeeeeeeec
Q 022676 144 NPFYSKVLKEHVMPYCHGLMNVDYET 169 (293)
Q Consensus 144 HP~H~~vv~~~i~p~~e~~~vvDye~ 169 (293)
||+|+++++ +++|++++++++||+.
T Consensus 95 HP~H~~~~~-~~~p~~e~~~v~D~~~ 119 (120)
T 3bn7_A 95 HPLLQKFVA-DCSHLWSKVVVYDSMS 119 (120)
T ss_dssp CHHHHHHHH-HHGGGEEEEEEEEEEC
T ss_pred CHHHHHHHH-HHHHHhccEEEEEEee
Confidence 999999985 6799999999999974
No 10
>1q4r_A Protein AT3G17210; center for eukaryotic structural genom structural genomics, protein structure initiative, CESG, UN function; 1.90A {Arabidopsis thaliana} SCOP: d.58.4.4 PDB: 1q53_A 2q3p_A
Probab=99.94 E-value=1.8e-26 Score=186.62 Aligned_cols=102 Identities=19% Similarity=0.219 Sum_probs=94.1
Q ss_pred cccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCC--CCCCceEEEEEEeCCHHHHHhhcCChh
Q 022676 185 FNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNL--SSEIYTHAVVIRLRSVEAFEMFVGSSD 262 (293)
Q Consensus 185 ~~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp--~~kGythafv~~F~s~eald~Y~~hp~ 262 (293)
+.-||+||||||||+++++++++++++.|.+|+++||| |+++++|.|.++ +++||||+|+++|+|.|||++|+.||.
T Consensus 7 ~~~mi~HiVlfklk~~~~~~~~~~~~~~l~~L~~~ip~-i~~~~~G~~~~~~~~~~~~d~~l~~~F~s~e~l~~Y~~hP~ 85 (112)
T 1q4r_A 7 AKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEP-MKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPA 85 (112)
T ss_dssp ---CEEEEEEEEECTTCCHHHHHHHHHHHHTHHHHCTT-CCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHHHHHSHH
T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHhhhCCc-eEEEEEccCCCccccCCCccEEEEEEECCHHHHHHHhCCHH
Confidence 34599999999999999999999999999999999999 999999999997 679999999999999999999999999
Q ss_pred HHHHHHhhhhccccceeEEeeEeCCC
Q 022676 263 YKEMWSNKFQPIIRTQLPVHFSVDPV 288 (293)
Q Consensus 263 H~~~~~~~v~p~~e~i~vvDy~v~~~ 288 (293)
|+++ .+.++|++++++++||+++.+
T Consensus 86 H~~~-~~~~~~~~~~~~v~D~~~~~~ 110 (112)
T 1q4r_A 86 HVEF-ATIFLGSLDKVLVIDYKPTSV 110 (112)
T ss_dssp HHHH-HHHHHHTEEEEEEEEECCCCS
T ss_pred HHHH-HHHHHHHhcCcEEEeeecccc
Confidence 9985 578899999999999998654
No 11
>3bgu_A Ferredoxin-like protein of unknown function; ferredoxin-like fold, stress responsive A/B barrel domain, S genomics; 1.50A {Thermobifida fusca}
Probab=99.93 E-value=1.7e-26 Score=188.65 Aligned_cols=98 Identities=19% Similarity=0.415 Sum_probs=94.7
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKE 265 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~ 265 (293)
..||+||||||||+++++++++++++.|++|+++||| |+++++|.|.+++++||||+|+++|+|.|||++|+.||.|++
T Consensus 19 ~~mI~HIVlfklK~~~s~e~~~~~~~~l~~L~~~ip~-i~~~~~G~~~s~~~~g~d~~l~~~F~s~edl~~Y~~hP~H~~ 97 (116)
T 3bgu_A 19 GMGIRHIALFRWNDTVTPDQVEQVITALSKLPAAIPE-LKNYAFGADLGLAAGNYDFAVVADLDGEDGFRAYQDHPDHRA 97 (116)
T ss_dssp SCEEEEEEEEEECTTCCHHHHHHHHHHHHHCCCCCTT-EEEEEEEECCSCSTTCCSEEEEEEEEHHHHHHHHHHSHHHHH
T ss_pred CCcEEEEEEEEECCCCCHHHHHHHHHHHHHHhhcCCc-eEEEEEccCCCCCCCCeeEEEEEEECCHHHHHHHhcCHHHHH
Confidence 4599999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred HHHhhhhccccceeEEeeEe
Q 022676 266 MWSNKFQPIIRTQLPVHFSV 285 (293)
Q Consensus 266 ~~~~~v~p~~e~i~vvDy~v 285 (293)
+++.++|++++++|+||++
T Consensus 98 -~~~~~~p~~~~~~v~D~~i 116 (116)
T 3bgu_A 98 -ALAIIAPMLADRVAVQFAL 116 (116)
T ss_dssp -HHHHHGGGEEEEEEEEEEC
T ss_pred -HHHHHHHHhCceEEEEEEC
Confidence 7899999999999999984
No 12
>3bb5_A Stress responsive alpha-beta protein; dimeric ferredoxin-like protein, structural genomics, joint for structural genomics, JCSG; HET: CIT; 2.30A {Jannaschia SP}
Probab=99.93 E-value=5e-26 Score=187.11 Aligned_cols=100 Identities=17% Similarity=0.293 Sum_probs=91.8
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCC--CCCCccEEEEEEECCHHHHHhhccCcc
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNE--NVENYTHGVFMRFQRKEHLVKFYENPF 146 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~--~~~gythaL~s~F~s~edL~~Y~~HP~ 146 (293)
.++.||+||||||||+++++++++++++.|.+|+++||||+++++|++.++ .+++|||+|+++|+|+|||++|+.||+
T Consensus 16 ~~~~mi~HIVlfklK~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~s~e~~~~g~~~~l~~~F~s~e~l~~Y~~hP~ 95 (121)
T 3bb5_A 16 YFQGMLYHLVMLEPEGEGAMDRIMEAMAILDGLAPELPGLTEFRHGPNRDFEQKSERYPYGFLCTFTDKAALDAYAVHPT 95 (121)
T ss_dssp ---CCEEEEEEECBCSTTHHHHHHHHHHHHHHHGGGCTTEEEEEEEEBCCTTSSCTTCCEEEEEEESSHHHHHHHHHSHH
T ss_pred cCCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHhcCCCeEEEEECCCCCccccCCCeeEEEEEEECCHHHHHHHHcCHh
Confidence 457799999999999999999999999999999999999999999999985 458999999999999999999999999
Q ss_pred hHHHHHHhhccce----eeeeeeeeec
Q 022676 147 YSKVLKEHVMPYC----HGLMNVDYET 169 (293)
Q Consensus 147 H~~vv~~~i~p~~----e~~~vvDye~ 169 (293)
|+++ +++++|++ ++++++||+.
T Consensus 96 H~~~-~~~~~p~~~gg~~~~~v~D~~~ 121 (121)
T 3bb5_A 96 HQRA-GGMLVASCRNGADGILVVDLEV 121 (121)
T ss_dssp HHHH-HHHHHHTBTTGGGGEEEEEEEC
T ss_pred HHHH-HHHHHHHhCcCcCCEEEEeEEC
Confidence 9997 56789999 9999999973
No 13
>3bde_A MLL5499 protein; stress responsive A/B barrel domain, structural genomics, JO center for structural genomics, JCSG; 1.79A {Mesorhizobium loti}
Probab=99.93 E-value=1e-25 Score=185.21 Aligned_cols=98 Identities=8% Similarity=0.159 Sum_probs=93.7
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
.||+||||||||+++++++++++++.|++|+++||| |+++++|.|.+++++ |||||+++|+|.|||++|+.||.|+++
T Consensus 19 ~mI~HIVlfklK~~~~~e~~~~~~~~l~~L~~~Ip~-I~~~~vG~~~~~~~~-~d~~l~~~F~s~edl~~Y~~HP~H~~~ 96 (120)
T 3bde_A 19 GMIRHTVVFTLKHASHSLEEKRFLVDAKKILSAIRG-VTHFEQLRQISPKID-YHFGFSMEFADQAAYTRYNDHPDHVAF 96 (120)
T ss_dssp CCEEEEEEEEESSCTTCHHHHHHHHHHHHHHHTSTT-CEEEEEEECCCSSSC-CCEEEEEEESSHHHHHHHHTSHHHHHH
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHHHHHHhhccCCc-eEEEEEccCCCCCCC-ccEEEEEEECCHHHHHHHhCCHHHHHH
Confidence 499999999999999999999999999999999999 999999999999766 999999999999999999999999996
Q ss_pred HHhhhhccccceeEEeeEeC
Q 022676 267 WSNKFQPIIRTQLPVHFSVD 286 (293)
Q Consensus 267 ~~~~v~p~~e~i~vvDy~v~ 286 (293)
+++.++|++++++++||++.
T Consensus 97 v~~~~~p~~e~~~vvD~e~~ 116 (120)
T 3bde_A 97 VRDRWVPEVEKFLEIDYVPL 116 (120)
T ss_dssp HHHTHHHHEEEEEEEEECCC
T ss_pred HHHHHHHHhccEEEEEEEEe
Confidence 68999999999999999864
No 14
>3bn7_A Ferredoxin-like protein; stress responsive A/B barre structural genomics, joint center for structural genomics; HET: MSE; 1.64A {Caulobacter crescentus}
Probab=99.93 E-value=1.1e-25 Score=184.91 Aligned_cols=98 Identities=11% Similarity=0.071 Sum_probs=91.4
Q ss_pred cccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCC-----CCCCceEEEEEEeCCHHHHHhhcC
Q 022676 185 FNFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNL-----SSEIYTHAVVIRLRSVEAFEMFVG 259 (293)
Q Consensus 185 ~~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp-----~~kGythafv~~F~s~eald~Y~~ 259 (293)
...||+||||||||+++++++++++++.|++|+ +||| |+++++|.|.++ +++||||||+++|+|.|||++|+.
T Consensus 17 ~~~mi~HIVlfklK~~~~~~~~~~~~~~l~~L~-~Ip~-i~~~~vG~~~s~e~R~~~~~g~d~~l~~~F~s~edl~~Y~~ 94 (120)
T 3bn7_A 17 FQGMLFHQVFFWLKNPGDKADRDKLIAGLKALK-AIDV-IQQLHVGVPAATEKRDVVDNSYDVSELMVFKSVEDQKRYRD 94 (120)
T ss_dssp --CCEEEEEEEEESSTTCHHHHHHHHHHHHGGG-GSTT-CSEEEEECCCCCCCCTTCCCCCSEEEEEEESSHHHHHHHHT
T ss_pred CCCcEEEEEEEEECCCCCHHHHHHHHHHHHhcc-CCCC-eEEEEEccCCCcccccccCCCccEEEEEEECCHHHHHHHhC
Confidence 345999999999999999999999999999999 8999 999999999995 389999999999999999999999
Q ss_pred ChhHHHHHHhhhhccccceeEEeeEe
Q 022676 260 SSDYKEMWSNKFQPIIRTQLPVHFSV 285 (293)
Q Consensus 260 hp~H~~~~~~~v~p~~e~i~vvDy~v 285 (293)
||.|+++ ++.++|++++++|+||+.
T Consensus 95 HP~H~~~-~~~~~p~~e~~~v~D~~~ 119 (120)
T 3bn7_A 95 HPLLQKF-VADCSHLWSKVVVYDSMS 119 (120)
T ss_dssp CHHHHHH-HHHHGGGEEEEEEEEEEC
T ss_pred CHHHHHH-HHHHHHHhccEEEEEEee
Confidence 9999884 579999999999999975
No 15
>3bb5_A Stress responsive alpha-beta protein; dimeric ferredoxin-like protein, structural genomics, joint for structural genomics, JCSG; HET: CIT; 2.30A {Jannaschia SP}
Probab=99.93 E-value=9.8e-26 Score=185.37 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=93.4
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCC--CCCCceEEEEEEeCCHHHHHhhcCChhH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNL--SSEIYTHAVVIRLRSVEAFEMFVGSSDY 263 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp--~~kGythafv~~F~s~eald~Y~~hp~H 263 (293)
..||+||||||||+++++++++++++.|.+|+++||| |+++++|.|.++ +++||||+|+++|+|.|||++|+.||+|
T Consensus 18 ~~mi~HIVlfklK~~~~~~~~~~~~~~l~~L~~~ip~-i~~~~~G~~~s~e~~~~g~~~~l~~~F~s~e~l~~Y~~hP~H 96 (121)
T 3bb5_A 18 QGMLYHLVMLEPEGEGAMDRIMEAMAILDGLAPELPG-LTEFRHGPNRDFEQKSERYPYGFLCTFTDKAALDAYAVHPTH 96 (121)
T ss_dssp -CCEEEEEEECBCSTTHHHHHHHHHHHHHHHGGGCTT-EEEEEEEEBCCTTSSCTTCCEEEEEEESSHHHHHHHHHSHHH
T ss_pred CCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccccCCCeeEEEEEEECCHHHHHHHHcCHhH
Confidence 4599999999999999999999999999999999999 999999999996 6899999999999999999999999999
Q ss_pred HHHHHhhhhccc----cceeEEeeEe
Q 022676 264 KEMWSNKFQPII----RTQLPVHFSV 285 (293)
Q Consensus 264 ~~~~~~~v~p~~----e~i~vvDy~v 285 (293)
++ +++.++|++ ++++|+||++
T Consensus 97 ~~-~~~~~~p~~~gg~~~~~v~D~~~ 121 (121)
T 3bb5_A 97 QR-AGGMLVASCRNGADGILVVDLEV 121 (121)
T ss_dssp HH-HHHHHHHTBTTGGGGEEEEEEEC
T ss_pred HH-HHHHHHHHhCcCcCCEEEEeEEC
Confidence 98 689999999 9999999985
No 16
>3fmb_A Dimeric protein of unknown function and ferredoxi fold; YP_212648.1, stress responsive A/B barrel domain; HET: MSE; 1.85A {Bacteroides fragilis}
Probab=99.92 E-value=2.1e-25 Score=182.88 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=87.8
Q ss_pred ceeEEEEEEecCCCCCChHH----HHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhH
Q 022676 188 GVEFVLLISFIQSAFGGPAE----DALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDY 263 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~----~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H 263 (293)
||+||||||||+++++++++ ++.+.|++|+++||| |+++++|.|.|+ ++||||+|+++|+|.|||++|+.||+|
T Consensus 20 mI~HIVlfklK~~~~~~~~~~~~~~~~~~l~~L~~~IP~-i~~~~vG~~~s~-~~~yd~~l~~~F~s~e~l~~Y~~HP~H 97 (118)
T 3fmb_A 20 MVKHIVLFKLRDDVPVEEKLVVMNSFKEAIEALPAKISV-IRKIEVGLNMNP-GETWNIALYSEFDNLDDVKFYATHPEH 97 (118)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHHHHHTGGGTCTT-CSEEEEEECCCT-TCCCCEEEEEEESSHHHHHHHHHSHHH
T ss_pred CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhhccCCC-eEEEEEeccCCC-CCCceEEEEEEECCHHHHHHHhCCHhH
Confidence 99999999999999998865 556789999999999 999999999985 579999999999999999999999999
Q ss_pred HHHHHhhhhccccceeEEeeEe
Q 022676 264 KEMWSNKFQPIIRTQLPVHFSV 285 (293)
Q Consensus 264 ~~~~~~~v~p~~e~i~vvDy~v 285 (293)
+++ .+.++|++++++|+||++
T Consensus 98 ~~~-~~~~~p~~e~~~vvDye~ 118 (118)
T 3fmb_A 98 VAA-GKILAETKESRACVDYEF 118 (118)
T ss_dssp HHH-HHTTTTTEEEEEEEEEEC
T ss_pred HHH-HHHHHHhhcccEEEEEEC
Confidence 985 559999999999999985
No 17
>1rjj_A Expressed protein; beta barrel, homodimer, structural genomics, protein structure initiative, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: d.58.4.4
Probab=99.92 E-value=3.5e-25 Score=178.60 Aligned_cols=99 Identities=17% Similarity=0.278 Sum_probs=90.8
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecC-CC--CCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRIS-NE--NVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~-s~--~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
.||+||||||||+++ +++++++.+.+|+++||||+++++|++. ++ ..+||||+|+++|+|+|||++|+.||+|+
T Consensus 4 ~Mi~HiVlfklk~~~---~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~~~~~~l~~~F~s~e~l~~Y~~hP~H~ 80 (111)
T 1rjj_A 4 SGFKHLVVVKFKEDT---KVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHV 80 (111)
T ss_dssp SEEEEEEEEECSSCC---CHHHHHHHHHHHHGGGGGSCEEEEEEECCSCTTTSTTCCEEEEEEESSHHHHHHHHTSHHHH
T ss_pred CcEEEEEEEEECCcc---hHHHHHHHHHHHHhcCCceEEEEEcCCCCCccccCCCccEEEEEEECCHHHHHHHhCCHHHH
Confidence 499999999999998 5789999999999999999999999998 75 35899999999999999999999999999
Q ss_pred HHHHHhhccceeeeeeeeeecccCCC
Q 022676 149 KVLKEHVMPYCHGLMNVDYETEVEDD 174 (293)
Q Consensus 149 ~vv~~~i~p~~e~~~vvDye~~v~~~ 174 (293)
++++. ++|++++++++||+.++...
T Consensus 81 ~~~~~-~~~~~~~~~v~D~~~~~~~~ 105 (111)
T 1rjj_A 81 EFSAA-FTAVIDKIVLLDFPVAAVKS 105 (111)
T ss_dssp HHHHH-HHHTCSEEEEEEEEECTTCC
T ss_pred HHHHH-HHHHhcceEEEEeEcceecc
Confidence 99875 68999999999999877763
No 18
>1rjj_A Expressed protein; beta barrel, homodimer, structural genomics, protein structure initiative, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: d.58.4.4
Probab=99.92 E-value=6.7e-25 Score=176.93 Aligned_cols=95 Identities=17% Similarity=0.350 Sum_probs=89.2
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccC-CC--CCCCceEEEEEEeCCHHHHHhhcCChhHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNF-NL--SSEIYTHAVVIRLRSVEAFEMFVGSSDYK 264 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~-Sp--~~kGythafv~~F~s~eald~Y~~hp~H~ 264 (293)
||+||||||||+++ +++++++.+++|+++||| |+++++|.|. ++ +++||||+++++|+|.|||++|+.||+|+
T Consensus 5 Mi~HiVlfklk~~~---~~~~~~~~l~~L~~~ip~-i~~~~~G~~~~~~~~~~~~~~~~l~~~F~s~e~l~~Y~~hP~H~ 80 (111)
T 1rjj_A 5 GFKHLVVVKFKEDT---KVDEILKGLENLVSQIDT-VKSFEWGEDKESHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHV 80 (111)
T ss_dssp EEEEEEEEECSSCC---CHHHHHHHHHHHHGGGGG-SCEEEEEEECCSCTTTSTTCCEEEEEEESSHHHHHHHHTSHHHH
T ss_pred cEEEEEEEEECCcc---hHHHHHHHHHHHHhcCCc-eEEEEEcCCCCCccccCCCccEEEEEEECCHHHHHHHhCCHHHH
Confidence 89999999999998 689999999999999999 9999999999 86 68999999999999999999999999998
Q ss_pred HHHHhhhhccccceeEEeeEeCC
Q 022676 265 EMWSNKFQPIIRTQLPVHFSVDP 287 (293)
Q Consensus 265 ~~~~~~v~p~~e~i~vvDy~v~~ 287 (293)
++ .+.++|++++++++||+++.
T Consensus 81 ~~-~~~~~~~~~~~~v~D~~~~~ 102 (111)
T 1rjj_A 81 EF-SAAFTAVIDKIVLLDFPVAA 102 (111)
T ss_dssp HH-HHHHHHTCSEEEEEEEEECT
T ss_pred HH-HHHHHHHhcceEEEEeEcce
Confidence 85 56889999999999999754
No 19
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=98.72 E-value=1.1e-06 Score=78.19 Aligned_cols=205 Identities=12% Similarity=0.069 Sum_probs=148.4
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
++|.+|+-++.|++-.++-.+.+.+.+.+...+=||-+.+.++.+.. ++-+..++=.|.|.+|+++-...|..+++.
T Consensus 5 ~pi~~i~~~~vkp~~~~~f~~~~~~~~~~s~~~E~G~l~y~~~~~~~---~p~~~~~~E~y~d~~A~~~H~~s~h~~~~~ 81 (220)
T 3f44_A 5 TPIFKIKKLTIAENDRSEYIRYAEKNMHDSIPAEEGTLLIGSGHDDA---HGEDNYEIEVFRNKGAEDLHIAGSHADDFV 81 (220)
T ss_dssp CCEEEEEEEEECGGGHHHHHHHHHHHHHHHTTTSTTEEEEEEEEETT---EEEEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred CcEEEEEEEEECcchHHHHHHHHHHHhhhhhccCCCeEEEEEEecCC---CCcEEEEEEEECCHHHHHHHhcCHHHHHHH
Confidence 46899999999887665555555554444433359999999998653 457899999999999999999999999998
Q ss_pred HHhhccceeeeeeeeeeccc--CCCccccccCCCCcccceeEEEEEEecCCCCCChHHHHH-HHHHHhhhhcCcceeeEE
Q 022676 152 KEHVMPYCHGLMNVDYETEV--EDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDAL-ESLKRLTAEFPSLIVQST 228 (293)
Q Consensus 152 ~~~i~p~~e~~~vvDye~~v--~~~~~~~~~~g~~~~~~i~HIVl~kFk~~~s~e~i~~l~-~~l~~Lk~~iPg~I~~~t 228 (293)
+. +.+++.+...++-.++. .......... =+-||..|+.++.|++.. ++..+++ +.+.....+=|| .+++.
T Consensus 82 ~~-~~~~l~~~~~~~l~p~~l~~k~~~~~~~~---~~~mI~~ia~~~vkpg~~-~~f~~~l~~~~~~~~r~EpG-cl~y~ 155 (220)
T 3f44_A 82 ET-VNKIATKQKVIDLHPEVITTKAQRALNSY---ADNFVMRLIKVEVKDADA-EKFSHAVKKEMTTSMASEPG-MEIMM 155 (220)
T ss_dssp HH-HHHHEEEEEEEEEEEEEEEECCC----------CCCEEEEEEEEECGGGH-HHHHHHHHHHHHHHHHHCTT-EEEEE
T ss_pred HH-HHHHhhCCceeeeeeEEeecchhhhhhcC---CCceEEEEEEEEECCCCH-HHHHHHHHHHHHHHHhCCCC-cEEEE
Confidence 76 57888887777665543 2221111111 256899999999997543 2233333 344444445699 99999
Q ss_pred eeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHHhhhhccccceeEEeeEeCCCC
Q 022676 229 QGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVG 289 (293)
Q Consensus 229 ~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~~~v~p~~e~i~vvDy~v~~~g 289 (293)
+..+.. ..-+..++-.++|.+++++....|.. +.+.+.+.+++++.-+..+.....|
T Consensus 156 ~~~d~~---~p~~f~~~E~w~d~~Al~aH~~s~hf-~~~~~~~~~ll~~~~v~~l~p~~l~ 212 (220)
T 3f44_A 156 SGTNID---NPNEWYFIEVYANDEAYDIHVKTPHY-KEYIEETDGMVKSRDVKTLVRDTLA 212 (220)
T ss_dssp EEEETT---EEEEEEEEEEESSHHHHHHHTTSHHH-HHHHHHTTTTEEEEEEEEEEEEEEE
T ss_pred EEEcCC---CCCEEEEEEEECCHHHHHHHhcCHHH-HHHHHHHHHHhcCCceEEeechhhh
Confidence 998753 33468899999999999999999955 5578899999999888887765544
No 20
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=98.08 E-value=0.00072 Score=60.24 Aligned_cols=195 Identities=8% Similarity=0.092 Sum_probs=138.7
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
++|..|+-++.|++--++-.+.+.+-+.....+=||-+.+.+..+.. ++-+..|+=.|+|.+|+++=...|..+++.
T Consensus 5 ~pi~~ia~~~vkp~~~~~f~~~~~~~~~~s~r~EpG~l~y~~~~~~~---~p~~fv~~E~y~d~~A~~~H~~s~Hf~~f~ 81 (219)
T 3mcs_A 5 VPILNVYDFEVKKDKETSYKSATEDYVNKTMGVEQGVLGLFAATDER---DKTTSYIVEIYNDYLAFSNHTKNQASKDFK 81 (219)
T ss_dssp CCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCSSEEEEEEEEECS---SSCEEEEEEEESSHHHHHHHHHSHHHHHHH
T ss_pred ccEEEEEEEEECcCcHHHHHHHHHHHhhhhhhcCCCeEEEEEEeeCC---CCCEEEEEEEECCHHHHHHHhCCHHHHHHH
Confidence 46889999999887665555555554444423359999999998764 467899999999999999999999999998
Q ss_pred HHhhccceeeee-eeeeecccCCCccccccCCCCcccceeEEEEEEecCCCCCChHHHHHHHHHHhhh---hcCcceeeE
Q 022676 152 KEHVMPYCHGLM-NVDYETEVEDDILPIFRKGEDFNFGVEFVLLISFIQSAFGGPAEDALESLKRLTA---EFPSLIVQS 227 (293)
Q Consensus 152 ~~~i~p~~e~~~-vvDye~~v~~~~~~~~~~g~~~~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~---~iPg~I~~~ 227 (293)
+. +.+.+.++. ..++.+...+|-.+. .+ ..++.=|+.++.|++. .+++.+.+..+.. .=|| .+.+
T Consensus 82 ~~-~~~~l~~~~~~~~~~~~~~~~k~~~--~~---~~~~~via~~~vkp~~----~e~~~~~~~~~~~~sr~E~G-cl~y 150 (219)
T 3mcs_A 82 AV-IPQIAEGNLNSAEIDVQIAKDKKIE--QN---DNTFAVYTVIDVKPEN----DKEFAEIIKNIVETTFNEEG-TLLV 150 (219)
T ss_dssp HH-HHHHEEEEEEEEEEEEEEEEECCCC--CC---TTCEEEEEEEEECGGG----HHHHHHHHHHHHHHHHHSTT-EEEE
T ss_pred HH-HHHHHhCCcccceeeEEeccccccc--CC---CCcEEEEEEEEECcCc----HHHHHHHHHHHHHHHcCCCC-eEEE
Confidence 76 567877644 444554422222121 11 2245556667777643 4555555544444 3499 9999
Q ss_pred EeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHHhhhhccccceeEEeeE
Q 022676 228 TQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFS 284 (293)
Q Consensus 228 t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~~~v~p~~e~i~vvDy~ 284 (293)
.+..+... .=+..|+-.+.|.+|+++-...| |-+.+.+.+.+++++.-+.+..
T Consensus 151 ~~~~~~~~---p~~f~~~E~w~d~~A~~aH~~s~-Hf~~~~~~~~~~l~~~~~~~l~ 203 (219)
T 3mcs_A 151 YLGTDRRN---FNKWCLFEVYKDIDSYLNHRSAK-YFKDYITQTKDMIAGKKRAELQ 203 (219)
T ss_dssp EEEEETTE---EEEEEEEEEESSHHHHHHHHTSH-HHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEecCCC---CCEEEEEEEECCHHHHHHHhcCH-HHHHHHHHHHHHHhCCceeecc
Confidence 99987643 23577999999999999999998 6566888999999987766654
No 21
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent, oxidoreductase; 1.70A {Streptomyces nogalater} PDB: 3kg1_A 3kng_A
Probab=97.46 E-value=0.0025 Score=51.98 Aligned_cols=84 Identities=8% Similarity=0.025 Sum_probs=70.1
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
...||.=|..|++|++ .++..+.+..+..+..+.||-+..++.+... +.-.+.++++++|+|+++++...|.+++
T Consensus 20 ~~~mi~via~~~V~pg--~~~f~~~~~~~~~~~~~~pGfi~~~L~r~~~---~p~~yv~~~~W~s~ea~~a~~~S~~f~a 94 (128)
T 3kg0_A 20 DADEVTFVNRFTVHGA--PAEFESVFARTAAFFARQPGFVRHTLLRERD---KDNSYVNIAVWTDHDAFRRALAQPGFLP 94 (128)
T ss_dssp -CCCEEEEEEEEECSC--HHHHHHHHHHHHHHHHTSTTEEEEEEEECTT---CSSEEEEEEEESSHHHHHHHHHCGGGHH
T ss_pred CCCcEEEEEEEEeCCC--HHHHHHHHHHHHHHHhcCCCccEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH
Confidence 3459999999999998 7777788788777778899999999998663 3456799999999999999999999999
Q ss_pred HHHHhhccce
Q 022676 150 VLKEHVMPYC 159 (293)
Q Consensus 150 vv~~~i~p~~ 159 (293)
.++.+ .+.+
T Consensus 95 ~~~~l-~~~~ 103 (128)
T 3kg0_A 95 HATAL-RALS 103 (128)
T ss_dssp HHHHH-HHHE
T ss_pred HHHhh-hhhc
Confidence 88764 4443
No 22
>3kkf_A Putative antibiotic biosynthesis monooxygenase; structural genomics, joint center for structural genomics, JCSG; HET: MSE P6G; 1.30A {Bacteroides thetaiotaomicron}
Probab=97.42 E-value=0.0024 Score=49.50 Aligned_cols=98 Identities=8% Similarity=0.059 Sum_probs=74.7
Q ss_pred CCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHH
Q 022676 71 RKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKV 150 (293)
Q Consensus 71 ~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~v 150 (293)
.+||.-|+-++.|++-.++-.+.+.+.+.....+=||-+.+.+.++.. ++-.+.++-+++|.+++++....|..+++
T Consensus 3 ~~mi~via~~~vkpg~~~~f~~~l~~~~~~s~r~EpGcl~y~~~~~~~---~p~~~~~~E~w~d~~a~~~H~~s~~~~~~ 79 (105)
T 3kkf_A 3 ENNMVRLSRIIIDPERLEEYNAYLKEEIEVSMRLEPGVLVLYAVAEKE---RPNHVTILEIYADEAAYKSHIATPHFKKY 79 (105)
T ss_dssp GGCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCTTEEEEEEEECSS---CTTEEEEEEEESSHHHHHHHHTSHHHHHH
T ss_pred CCCEEEEEEEEECcCcHHHHHHHHHHHHHHHHhCCCCcEEEEEEEeCC---CCCEEEEEEEECCHHHHHHHhcCHHHHHH
Confidence 359999999999987544333333333334324579999999988653 46789999999999999999999999999
Q ss_pred HHHhhccceeeeeeeeeecccC
Q 022676 151 LKEHVMPYCHGLMNVDYETEVE 172 (293)
Q Consensus 151 v~~~i~p~~e~~~vvDye~~v~ 172 (293)
.+. +.+.+++...+...+...
T Consensus 80 ~~~-~~~~l~~~~~~~l~pi~~ 100 (105)
T 3kkf_A 80 KEG-TLDMVQMLELIDATPLIP 100 (105)
T ss_dssp HHH-HGGGEEEEEEEEECCSST
T ss_pred HHH-HHHHhhCcceEEEeecCc
Confidence 876 579999887777765433
No 23
>2fb0_A Conserved hypothetical protein; SAD, bacteroides thetaiotaom structural genomics, PSI, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron}
Probab=97.25 E-value=0.0065 Score=45.44 Aligned_cols=86 Identities=9% Similarity=0.086 Sum_probs=66.7
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.=++-++.|++- .++..+.+..+.....+-||-+.+.+.++.. ++-.+.++-+++|.++++++...|..+++.
T Consensus 3 ~mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG~l~~~~~~~~~---~p~~~~~~e~w~~~~a~~~h~~s~~~~~~~ 78 (94)
T 2fb0_A 3 SMIRLNVFVRVNETN-REKAIEAAKELTACSLKEEGCIAYDTFESST---RRDVFMICETWQNAEVLAAHEKTAHFAQYV 78 (94)
T ss_dssp CCEEEEEEEECCTTT-HHHHHHHHHHHHHHHTTSTTEEEEEEEECSS---CTTEEEEEEEESSHHHHHHHTTSHHHHHHH
T ss_pred cEEEEEEEEEECccc-HHHHHHHHHHHHHHHhcCCCceEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhCCHHHHHHH
Confidence 488889999999885 4455555555544445689999999998764 345899999999999999999999999988
Q ss_pred HHhhccceeee
Q 022676 152 KEHVMPYCHGL 162 (293)
Q Consensus 152 ~~~i~p~~e~~ 162 (293)
+. +.+.+.+.
T Consensus 79 ~~-~~~~l~~~ 88 (94)
T 2fb0_A 79 GI-IQELAEMK 88 (94)
T ss_dssp HH-HHHHSEEE
T ss_pred HH-HHHHhcCC
Confidence 76 45666543
No 24
>2gff_A LSRG protein; dimeric alpha+beta barrel ferredoxin fold, sugar binding protein; 1.75A {Yersinia pestis} PDB: 3qmq_A
Probab=97.18 E-value=0.0058 Score=47.12 Aligned_cols=85 Identities=9% Similarity=0.152 Sum_probs=65.8
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHH
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLK 152 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~ 152 (293)
||.=++-++.|++- .++..+.+..+.+...+-||-+.+.+.++.. ++-.+.++.+|+|.++++++...|..+++.+
T Consensus 1 Mi~vi~~~~vkpg~-~~~~~~~~~~~~~~~r~epG~l~~~~~~~~~---~p~~~~~~E~w~d~~a~~~h~~s~~~~~~~~ 76 (106)
T 2gff_A 1 MHVTLVEINVKEDK-VDQFIEVFRANHLGSIREAGNLRFDVLRDEH---IPTRFYIYEAYTDEAAVAIHKTTPHYLQCVE 76 (106)
T ss_dssp CEEEEEEEEBCGGG-HHHHHHHHHHHHHHHHTSTTEEEEEEEEESS---CTTEEEEEEEESSHHHHHHHTTSHHHHHHHH
T ss_pred CEEEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhcCHHHHHHHH
Confidence 67788889998874 4444555555544445689999999998764 3468999999999999999999999999987
Q ss_pred Hhhccceeee
Q 022676 153 EHVMPYCHGL 162 (293)
Q Consensus 153 ~~i~p~~e~~ 162 (293)
. +.+.+.+.
T Consensus 77 ~-~~~~l~~~ 85 (106)
T 2gff_A 77 Q-LAPLMTGP 85 (106)
T ss_dssp H-HGGGBSSC
T ss_pred H-HHHHhcCC
Confidence 6 46777653
No 25
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=97.17 E-value=0.011 Score=44.55 Aligned_cols=88 Identities=9% Similarity=0.076 Sum_probs=67.4
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.-++-++.|++- .++..+.+..+.....+-||-+.+.+.++.. ++-.+.++.+++|.++++++...|..+++.
T Consensus 5 ~mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG~l~~~~~~~~~---~p~~~~~~e~w~~~~a~~~h~~s~~~~~~~ 80 (99)
T 1x7v_A 5 TPLTLIATITAAPGH-AEALERELRALVAPSRAEAGCLQYDLHQDRH---DSHLFYMIEQWRDDAALERHQNTEHFLRFS 80 (99)
T ss_dssp SCEEEEEEEEECTTC-HHHHHHHHHHHHHHHHHSTTEEEEEEEECSS---CTTEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred CcEEEEEEEEECCCC-HHHHHHHHHHHHHHHhCCCCceEEEEEecCC---CCCEEEEEEEECCHHHHHHHhcCHHHHHHH
Confidence 489999999999886 4445555555544445689999999998754 345789999999999999999999999988
Q ss_pred HHhhccceeeeee
Q 022676 152 KEHVMPYCHGLMN 164 (293)
Q Consensus 152 ~~~i~p~~e~~~v 164 (293)
+. +.+......+
T Consensus 81 ~~-~~~~~~~~~v 92 (99)
T 1x7v_A 81 RG-NEALLQNVKI 92 (99)
T ss_dssp TT-CGGGEEEEEE
T ss_pred HH-HHHhcCCceE
Confidence 65 4566444433
No 26
>3kkf_A Putative antibiotic biosynthesis monooxygenase; structural genomics, joint center for structural genomics, JCSG; HET: MSE P6G; 1.30A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.0062 Score=47.08 Aligned_cols=100 Identities=6% Similarity=-0.007 Sum_probs=74.4
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHh-hhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRL-TAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYK 264 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~L-k~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~ 264 (293)
|-||.-|+.++.|++.. ++..+++..+... ..+-|| .+++.+..+.. ..-+..++-.++|.+++++....|..+
T Consensus 3 ~~mi~via~~~vkpg~~-~~f~~~l~~~~~~s~r~EpG-cl~y~~~~~~~---~p~~~~~~E~w~d~~a~~~H~~s~~~~ 77 (105)
T 3kkf_A 3 ENNMVRLSRIIIDPERL-EEYNAYLKEEIEVSMRLEPG-VLVLYAVAEKE---RPNHVTILEIYADEAAYKSHIATPHFK 77 (105)
T ss_dssp GGCEEEEEEEEECGGGH-HHHHHHHHHHHHHHHHHCTT-EEEEEEEECSS---CTTEEEEEEEESSHHHHHHHHTSHHHH
T ss_pred CCCEEEEEEEEECcCcH-HHHHHHHHHHHHHHHhCCCC-cEEEEEEEeCC---CCCEEEEEEEECCHHHHHHHhcCHHHH
Confidence 35888899999987543 3333444433322 245799 99999887653 445788999999999999999999555
Q ss_pred HHHHhhhhccccceeEEeeEeCCCCCc
Q 022676 265 EMWSNKFQPIIRTQLPVHFSVDPVGTE 291 (293)
Q Consensus 265 ~~~~~~v~p~~e~i~vvDy~v~~~g~~ 291 (293)
.+.+.+.+++++.-+.....-+.|+.
T Consensus 78 -~~~~~~~~~l~~~~~~~l~pi~~~~~ 103 (105)
T 3kkf_A 78 -KYKEGTLDMVQMLELIDATPLIPGLK 103 (105)
T ss_dssp -HHHHHHGGGEEEEEEEEECCSSTTCC
T ss_pred -HHHHHHHHHhhCcceEEEeecCcccc
Confidence 57789999999988888877677754
No 27
>1y0h_A Hypothetical protein RV0793; ferredoxin-like fold, alpha+beta sandwich with antiparallel sheet, structural genomics, PSI; 1.60A {Mycobacterium tuberculosis} SCOP: d.58.4.11
Probab=97.12 E-value=0.005 Score=46.69 Aligned_cols=85 Identities=16% Similarity=0.157 Sum_probs=66.0
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.-++-++.|++- .++..+.+..+.....+-||-+.+.+.++ .. +-++.++.+++|.+++++....|..+++.
T Consensus 4 ~mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG~l~~~~~~~-~~---~~~~~~~e~w~~~~a~~~h~~s~~~~~~~ 78 (102)
T 1y0h_A 4 SPVAVIARFMPRPDA-RSALRALLDAMITPTRAEDGCRSYDLYES-AD---GGELVLFERYRSRIALDEHRGSPHYLNYR 78 (102)
T ss_dssp SCEEEEEEECBCGGG-HHHHHHHHHHHHHHHHHSTTEEEEEEEEE-TT---SSCEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred ceEEEEEEEEECCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEEEe-CC---CCEEEEEEEECCHHHHHHHhcChHHHHHH
Confidence 589899999998874 44445555555444456899999999988 43 35789999999999999999999999988
Q ss_pred HHhhccceeee
Q 022676 152 KEHVMPYCHGL 162 (293)
Q Consensus 152 ~~~i~p~~e~~ 162 (293)
+. +.+.+.+.
T Consensus 79 ~~-~~~~l~~~ 88 (102)
T 1y0h_A 79 AQ-VGELLTRP 88 (102)
T ss_dssp TT-SGGGBSSC
T ss_pred HH-HHHHhcCC
Confidence 65 56777653
No 28
>1iuj_A Hypothetical protein TT1380; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.60A {Thermus thermophilus} SCOP: d.58.4.5
Probab=97.02 E-value=0.0057 Score=46.61 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=60.8
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHH
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLK 152 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~ 152 (293)
||.=|+-|++|++- .++..+.++.+.....+.||-+...+.++... .-.+.++.+|+|.++++++...|.++++.+
T Consensus 1 Mi~vi~~~~v~~g~-~~~f~~~~~~~~~~~~~~pG~l~~~l~~~~~~---~~~~~~~~~W~s~~a~~a~~~s~~~~~~~~ 76 (106)
T 1iuj_A 1 MFVTMNRIPVRPEY-AEQFEEAFRQRARLVDRMPGFIRNLVLRPKNP---GDPYVVMTLWESEEAFRAWTESPAFKEGHA 76 (106)
T ss_dssp CEEEEEEECBCGGG-HHHHHHHHHHHGGGGTTSTTEEEEEEEEESST---TSCEEEEEEESCHHHHHHHHTSHHHHHHTT
T ss_pred CEEEEEEEEeCcch-HHHHHHHHHHHHHHhccCCCceEEEEEecCCC---CCeEEEEEEECCHHHHHHHhcCHHHHHHHh
Confidence 56667777887764 45566666666666667899999999987642 357899999999999999999999999775
Q ss_pred H
Q 022676 153 E 153 (293)
Q Consensus 153 ~ 153 (293)
.
T Consensus 77 ~ 77 (106)
T 1iuj_A 77 R 77 (106)
T ss_dssp T
T ss_pred c
Confidence 4
No 29
>1q8b_A Protein YJCS; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG, unknown function; 1.90A {Bacillus subtilis} SCOP: d.58.4.6
Probab=97.01 E-value=0.01 Score=45.86 Aligned_cols=87 Identities=11% Similarity=0.046 Sum_probs=69.4
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.-++-++.|++-..++..+.+..+.+...+-||-+.+.+.++.. ++-.+.++-+++|.+++++....|..+++.
T Consensus 12 ~mi~vi~~~~vkpg~d~~~f~~~l~~~~~~~r~epGcl~~~~~~~~~---~p~~~~~~E~w~d~~a~~~H~~s~~~~~~~ 88 (105)
T 1q8b_A 12 SMHYITACLKIISDKDLNEIMKEFKKLEEETNKEEGCITFHAYPLEP---SERKIMLWEIWENEEAVKIHFTKKHTIDVQ 88 (105)
T ss_dssp CEEEEEEEEEECCCSCHHHHHHHHHHHHHHHTTSTTEEEEEEEECCG---GGCEEEEEEEESSHHHHHHHTTSHHHHHHH
T ss_pred eEEEEEEEEEECCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhcCHHHHHHH
Confidence 37999999999998746666666666655555689999999998753 345899999999999999999999999988
Q ss_pred HHhhccceeee
Q 022676 152 KEHVMPYCHGL 162 (293)
Q Consensus 152 ~~~i~p~~e~~ 162 (293)
+. +.+.+++.
T Consensus 89 ~~-~~~~l~~~ 98 (105)
T 1q8b_A 89 KQ-ELTEVEWL 98 (105)
T ss_dssp TT-TCEEEEEE
T ss_pred HH-HHHHhhCh
Confidence 65 45666654
No 30
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initi midwest center for structural genomics, MCSG, oxidoreductas; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=96.94 E-value=0.015 Score=46.66 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=69.8
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
....||.=++-++.|++- .++..+++..+.+...+-||-+.+.+.++.. +.-.+.++-+|+|.++++++...|..+
T Consensus 19 ~~~~mi~vi~~~~vkpg~-~~~f~~~l~~~~~~sr~EpGcl~y~l~~~~~---dp~~f~~~E~W~d~eal~aH~~s~~~~ 94 (124)
T 2omo_A 19 FQGHMYVTIVYASVKTDK-TEAFKEATRMNHEQSIREPGNMRFDILQSAD---DPTRFVLYEAYKTRKDAAAHKETAHYL 94 (124)
T ss_dssp CCCSSEEEEEEEEBCGGG-HHHHHHHHHHHHHHHTTSTTEEEEEEEEESS---CTTEEEEEEEESSHHHHHHHTTSHHHH
T ss_pred cCCceEEEEEEEEECcCc-HHHHHHHHHHHHHHHhcCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhCCHHHH
Confidence 345589999999999874 4455555555544445689999999998764 346899999999999999999999999
Q ss_pred HHHHHhhccceeeee
Q 022676 149 KVLKEHVMPYCHGLM 163 (293)
Q Consensus 149 ~vv~~~i~p~~e~~~ 163 (293)
++.+. +.+.+.+..
T Consensus 95 ~~~~~-~~~ll~~~~ 108 (124)
T 2omo_A 95 TWRDT-VADWMAEPR 108 (124)
T ss_dssp HHHHH-HGGGBSSCC
T ss_pred HHHHH-HHHHhcCCc
Confidence 99876 467777643
No 31
>3gz7_A Putative antibiotic biosynthesis monooxygenase; NP_888398.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.15A {Bordetella bronchiseptica}
Probab=96.93 E-value=0.019 Score=45.68 Aligned_cols=90 Identities=9% Similarity=0.059 Sum_probs=69.3
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHH-hhccCcchHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLV-KFYENPFYSKV 150 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~-~Y~~HP~H~~v 150 (293)
.||.=|+.+++|++-.++ ..+.+..+.....+-||-+.+.+.++.. ++-.+.++.+++|.++++ .|...|..+++
T Consensus 19 ~~i~via~~~vkpg~~~~-f~~~~~~~~~~~r~epGcl~y~l~r~~~---~p~~f~~~E~W~s~eal~~hf~~S~hf~~~ 94 (115)
T 3gz7_A 19 GMIQEIASILVQPGREAD-FEAGVAQARPLFMRARGCHGVALHRSIE---APQRYTLVVDWETVDNHMVDFRQSADFQEW 94 (115)
T ss_dssp SCEEEEEEEEBCTTCHHH-HHHHHHHHHHHHHTSTTEEEEEEEEESS---STTEEEEEEEESSHHHHHTTTTTSHHHHHH
T ss_pred eEEEEEEEEEECCCCHHH-HHHHHHHHHHHHhcCCCeEEEEEEecCC---CCCEEEEEEEECCHHHHHHHHhcCHHHHHH
Confidence 588889999999886554 4444444555555689999999998764 345789999999999999 67999999998
Q ss_pred HHHhhccceeeeeeee
Q 022676 151 LKEHVMPYCHGLMNVD 166 (293)
Q Consensus 151 v~~~i~p~~e~~~vvD 166 (293)
.+. +.|++++.-.+.
T Consensus 95 ~~~-~~~ll~~~p~i~ 109 (115)
T 3gz7_A 95 RKL-VGECFAEPPQVH 109 (115)
T ss_dssp HHH-HGGGBSSCCEEE
T ss_pred HHH-HHHHhcCCCEEE
Confidence 876 578777654444
No 32
>2fb0_A Conserved hypothetical protein; SAD, bacteroides thetaiotaom structural genomics, PSI, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.013 Score=43.81 Aligned_cols=88 Identities=8% Similarity=0.089 Sum_probs=65.3
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKE 265 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~ 265 (293)
++||.-++.++.|++. .++..+++..+.....+-|| .+++.+..+.. ..-+..++.+++|.+++++...+|..++
T Consensus 2 ~~mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG-~l~~~~~~~~~---~p~~~~~~e~w~~~~a~~~h~~s~~~~~ 76 (94)
T 2fb0_A 2 NSMIRLNVFVRVNETN-REKAIEAAKELTACSLKEEG-CIAYDTFESST---RRDVFMICETWQNAEVLAAHEKTAHFAQ 76 (94)
T ss_dssp CCCEEEEEEEECCTTT-HHHHHHHHHHHHHHHTTSTT-EEEEEEEECSS---CTTEEEEEEEESSHHHHHHHTTSHHHHH
T ss_pred CcEEEEEEEEEECccc-HHHHHHHHHHHHHHHhcCCC-ceEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhCCHHHHH
Confidence 3578888888888764 34455555555544556799 99999988753 2347889999999999999999996655
Q ss_pred HHHhhhhcccccee
Q 022676 266 MWSNKFQPIIRTQL 279 (293)
Q Consensus 266 ~~~~~v~p~~e~i~ 279 (293)
+.+.+.++++.--
T Consensus 77 -~~~~~~~~l~~~p 89 (94)
T 2fb0_A 77 -YVGIIQELAEMKL 89 (94)
T ss_dssp -HHHHHHHHSEEEE
T ss_pred -HHHHHHHHhcCCc
Confidence 6778888887543
No 33
>3e8o_A Uncharacterized protein with erredoxin-like fold; putative antibiotic biosynthesis monooxygenase; HET: MSE; 1.40A {Deinococcus radiodurans}
Probab=96.90 E-value=0.0094 Score=47.38 Aligned_cols=101 Identities=9% Similarity=-0.019 Sum_probs=70.3
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
.||.=++.++.|++. .++..+++..+.+.-.+-|| .+++.+..+.. +.-+..++-+|+|.++++++...|..++
T Consensus 18 ~mi~via~~~vkpg~-~~~~~~~l~~~~~~~r~EpG-cl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~~~~- 91 (119)
T 3e8o_A 18 TMVISHGTLSASAEH-AAHLRQLLVHIAQATRQEDG-CLLYLVSEDLS---QPGHFLITEHWDNLGAMHTHLALPGVTQ- 91 (119)
T ss_dssp CCEEEEEEEECCTTT-HHHHHHHHHHHHHHHTTSTT-EEEEEEEEETT---STTEEEEEEEESSHHHHHHHHTCHHHHH-
T ss_pred ceEEEEEEEEECCCC-HHHHHHHHHHHHHHHhcCCC-cEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH-
Confidence 377778888888764 34455555555555556799 99999988753 3347889999999999999999996655
Q ss_pred HHhhhhccccceeEEeeEeCCCCCcCC
Q 022676 267 WSNKFQPIIRTQLPVHFSVDPVGTEIM 293 (293)
Q Consensus 267 ~~~~v~p~~e~i~vvDy~v~~~g~~~~ 293 (293)
+.+.+.+++..-..+.+--.-.|..||
T Consensus 92 ~~~~~~~ll~~~~~i~~~~~~~~~~~~ 118 (119)
T 3e8o_A 92 AIDALKHLNVTDLKITAYEAGEAINIM 118 (119)
T ss_dssp HHHHHHHTTCCCCEEEEEEBCSCEEEE
T ss_pred HHHHHHHHhcCCCEEEEEecccccccC
Confidence 777899996544333333333444444
No 34
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure in midwest center for structural genomics; 1.97A {Shewanella oneidensis}
Probab=96.88 E-value=0.014 Score=45.11 Aligned_cols=86 Identities=9% Similarity=0.063 Sum_probs=66.4
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH-H
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK-V 150 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~-v 150 (293)
.||.-++-++.|++-. ++..+.+..+.+...+-||-+.+.+.++.. ++-.+.++-+++|.+++++....|..++ +
T Consensus 12 ~mi~v~~~~~vkpg~~-~~f~~~~~~~~~~~~~epGcl~~~~~~~~~---~p~~~~~~E~w~~~~a~~~H~~s~~~~~~~ 87 (108)
T 2bbe_A 12 QQIVCVASFLSKEGKT-EALIAALASLIPDTRREAGCIRYELNVSRD---EPRRVTFVEKFVDIAAFDEHCAKDAIQHYF 87 (108)
T ss_dssp SSEEEEEEEEECTTCH-HHHHHHHHTTHHHHHTSTTEEEEEEEECSS---STTEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred cEEEEEEEEEECCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEEecCC---CCCEEEEEEEECCHHHHHHHhcChHHHHHH
Confidence 4799999999998754 444444444444444589999999998764 3458899999999999999999999999 8
Q ss_pred HHHhhccceeee
Q 022676 151 LKEHVMPYCHGL 162 (293)
Q Consensus 151 v~~~i~p~~e~~ 162 (293)
.+. +.+.+.+.
T Consensus 88 ~~~-~~~~l~~~ 98 (108)
T 2bbe_A 88 HQV-MPELVESF 98 (108)
T ss_dssp HHT-HHHHEEEE
T ss_pred HHH-HHHhcccc
Confidence 865 46777773
No 35
>3bm7_A Protein of unknown function with ferredoxin-like; ferredoxin-like fold, antibiotic biosynthesis monooxygenase, structural genomics; HET: MSE; 1.35A {Caulobacter crescentus}
Probab=96.85 E-value=0.019 Score=45.21 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=70.1
Q ss_pred CCcEEEEEEEEecCCCCHHHHHHHHHHHH-hhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 71 RKVVEHICLLKAKKDLSEEEEKDMLDYLY-TSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 71 ~~mI~HIVlfK~K~~~s~e~~~~~~~~L~-~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
..||.=++-++.|++-. ++..+.+..+. +...+-||-+.+.+.++.. +.-.+.++-+++|.+++++....|..++
T Consensus 18 ~~~i~vi~~~~vkpg~~-~~f~~~l~~~~~~~~r~EpGcl~y~l~~~~~---~p~~f~~~E~W~d~ea~~aH~~s~~~~~ 93 (115)
T 3bm7_A 18 QGMIGVVATLKVQPAKA-AEFEKVFLDLAAKVKANEPGCLVYQLTRSKT---EEGVYKVLELYASMDALKHHGGTDYFKA 93 (115)
T ss_dssp SSCEEEEEEEEECGGGH-HHHHHHHHHHHHHHHHHCTTEEEEEEEECSS---STTEEEEEEEESSHHHHHHHHHCHHHHH
T ss_pred CccEEEEEEEEECCCCH-HHHHHHHHHHHHHHhcCCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhCCHHHHH
Confidence 45788999999998753 44444444444 4444579999999998764 3458999999999999999999999999
Q ss_pred HHHHhhccceeeeeeeee
Q 022676 150 VLKEHVMPYCHGLMNVDY 167 (293)
Q Consensus 150 vv~~~i~p~~e~~~vvDy 167 (293)
+.+. +.+.+.+...+.+
T Consensus 94 ~~~~-~~~ll~~~~~i~~ 110 (115)
T 3bm7_A 94 AGAA-MGPTMAGAPVIEY 110 (115)
T ss_dssp HHHH-HGGGEEEEEEEEE
T ss_pred HHHH-HHHHhcCCcEEEE
Confidence 9876 5688777555543
No 36
>1tuv_A Protein YGIN; menadione oxidase, monooxygenase, CO-crystal with natural PR ferredoxin fold, unknown function; HET: VK3; 1.70A {Escherichia coli} SCOP: d.58.4.11 PDB: 1r6y_A
Probab=96.85 E-value=0.015 Score=45.91 Aligned_cols=95 Identities=7% Similarity=-0.029 Sum_probs=68.4
Q ss_pred ceeEEEEEEecCCC-CCChHHHHHHHHHHhhhhcCcceeeEEeeccCC---C--CCCCceEEEEEEeCCHHHHHhhcCCh
Q 022676 188 GVEFVLLISFIQSA-FGGPAEDALESLKRLTAEFPSLIVQSTQGSNFN---L--SSEIYTHAVVIRLRSVEAFEMFVGSS 261 (293)
Q Consensus 188 ~i~HIVl~kFk~~~-s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~S---p--~~kGythafv~~F~s~eald~Y~~hp 261 (293)
||.=|+.++.|++. ..++..+++..+.....+-|| .+++.+..+.- | ....-+..++-+++|.+++++....|
T Consensus 1 Mi~via~~~vkpg~~~~~~f~~~l~~~~~~~r~EpG-cl~y~~~~~~~~~~~~~~~~p~~~~~~E~W~d~~al~aH~~s~ 79 (114)
T 1tuv_A 1 MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEG-CHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTP 79 (114)
T ss_dssp CEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSTT-EEEEEEECCCCCCCTTCCCCTTEEEEEEEESCHHHHHHHHTSH
T ss_pred CEEEEEEEEECCCcchHHHHHHHHHHHHHHHccCCC-cEEEEEEecccccccccCCCCCEEEEEEEECCHHHHHHHhcCH
Confidence 67778888888763 334555555555555556799 99999988721 1 23455888999999999999999998
Q ss_pred hHHHHHHhhhhccccceeEEeeE
Q 022676 262 DYKEMWSNKFQPIIRTQLPVHFS 284 (293)
Q Consensus 262 ~H~~~~~~~v~p~~e~i~vvDy~ 284 (293)
..++ +.+.+.++++..-+--|+
T Consensus 80 h~~~-~~~~~~~l~~~~~i~~~~ 101 (114)
T 1tuv_A 80 HMKA-YSEAVKGDVLEMNIRILQ 101 (114)
T ss_dssp HHHH-HHHHHTTTEEEEEEEEEC
T ss_pred HHHH-HHHHHHHhccCCEEEEEE
Confidence 5555 777899998875443333
No 37
>3e8o_A Uncharacterized protein with erredoxin-like fold; putative antibiotic biosynthesis monooxygenase; HET: MSE; 1.40A {Deinococcus radiodurans}
Probab=96.81 E-value=0.025 Score=44.89 Aligned_cols=88 Identities=8% Similarity=0.025 Sum_probs=67.3
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
.+..||.=++-++.|++- .++..+.+..+.+...+-||-+.+.+.++.. +.-.+.++-+++|.++++++...|..+
T Consensus 15 ~~~~mi~via~~~vkpg~-~~~~~~~l~~~~~~~r~EpGcl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~~~ 90 (119)
T 3e8o_A 15 RRTTMVISHGTLSASAEH-AAHLRQLLVHIAQATRQEDGCLLYLVSEDLS---QPGHFLITEHWDNLGAMHTHLALPGVT 90 (119)
T ss_dssp ---CCEEEEEEEECCTTT-HHHHHHHHHHHHHHHTTSTTEEEEEEEEETT---STTEEEEEEEESSHHHHHHHHTCHHHH
T ss_pred CCCceEEEEEEEEECCCC-HHHHHHHHHHHHHHHhcCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHH
Confidence 345799999999999875 4445555555555445689999999998764 356899999999999999999999999
Q ss_pred HHHHHhhccceee
Q 022676 149 KVLKEHVMPYCHG 161 (293)
Q Consensus 149 ~vv~~~i~p~~e~ 161 (293)
++.+. +.+.+.+
T Consensus 91 ~~~~~-~~~ll~~ 102 (119)
T 3e8o_A 91 QAIDA-LKHLNVT 102 (119)
T ss_dssp HHHHH-HHHTTCC
T ss_pred HHHHH-HHHHhcC
Confidence 99876 4577443
No 38
>1tuv_A Protein YGIN; menadione oxidase, monooxygenase, CO-crystal with natural PR ferredoxin fold, unknown function; HET: VK3; 1.70A {Escherichia coli} SCOP: d.58.4.11 PDB: 1r6y_A
Probab=96.80 E-value=0.024 Score=44.66 Aligned_cols=89 Identities=8% Similarity=0.064 Sum_probs=68.1
Q ss_pred cEEEEEEEEecCCC-CHHHHHHHHHHHHhhhhcCCceEEEEEeecCC---C--CCCCccEEEEEEECCHHHHHhhccCcc
Q 022676 73 VVEHICLLKAKKDL-SEEEEKDMLDYLYTSQYQMGGIVAISLGRISN---E--NVENYTHGVFMRFQRKEHLVKFYENPF 146 (293)
Q Consensus 73 mI~HIVlfK~K~~~-s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s---~--~~~gythaL~s~F~s~edL~~Y~~HP~ 146 (293)
||.=++-++.|++. ..++..+.+..+.....+=||-+.+.+.++.. | ..++-++.++-+++|.+++++....|.
T Consensus 1 Mi~via~~~vkpg~~~~~~f~~~l~~~~~~~r~EpGcl~y~~~~~~~~~~~~~~~~p~~~~~~E~W~d~~al~aH~~s~h 80 (114)
T 1tuv_A 1 MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPH 80 (114)
T ss_dssp CEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSTTEEEEEEECCCCCCCTTCCCCTTEEEEEEEESCHHHHHHHHTSHH
T ss_pred CEEEEEEEEECCCcchHHHHHHHHHHHHHHHccCCCcEEEEEEecccccccccCCCCCEEEEEEEECCHHHHHHHhcCHH
Confidence 67778899999884 35555666666555555689999999988721 0 134568999999999999999999999
Q ss_pred hHHHHHHhhccceeee
Q 022676 147 YSKVLKEHVMPYCHGL 162 (293)
Q Consensus 147 H~~vv~~~i~p~~e~~ 162 (293)
.+++.+. +.+..++.
T Consensus 81 ~~~~~~~-~~~l~~~~ 95 (114)
T 1tuv_A 81 MKAYSEA-VKGDVLEM 95 (114)
T ss_dssp HHHHHHH-HTTTEEEE
T ss_pred HHHHHHH-HHHhccCC
Confidence 9998876 56777664
No 39
>2omo_A DUF176; structural genomics, APC6266, PSI-2, protein structure initi midwest center for structural genomics, MCSG, oxidoreductas; HET: MSE; 1.83A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=96.70 E-value=0.023 Score=45.51 Aligned_cols=98 Identities=8% Similarity=0.078 Sum_probs=68.3
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
.||.-++.++.|++. .++..+++..+.....+-|| .+++.+..+.. ..-++.++-+|+|.+++++....|..++
T Consensus 22 ~mi~vi~~~~vkpg~-~~~f~~~l~~~~~~sr~EpG-cl~y~l~~~~~---dp~~f~~~E~W~d~eal~aH~~s~~~~~- 95 (124)
T 2omo_A 22 HMYVTIVYASVKTDK-TEAFKEATRMNHEQSIREPG-NMRFDILQSAD---DPTRFVLYEAYKTRKDAAAHKETAHYLT- 95 (124)
T ss_dssp SSEEEEEEEEBCGGG-HHHHHHHHHHHHHHHTTSTT-EEEEEEEEESS---CTTEEEEEEEESSHHHHHHHTTSHHHHH-
T ss_pred ceEEEEEEEEECcCc-HHHHHHHHHHHHHHHhcCCC-cEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhCCHHHHH-
Confidence 377788888888753 34445555555444456799 99999887653 2347889999999999999999996665
Q ss_pred HHhhhhcccccee-EEeeE-eCCCCC
Q 022676 267 WSNKFQPIIRTQL-PVHFS-VDPVGT 290 (293)
Q Consensus 267 ~~~~v~p~~e~i~-vvDy~-v~~~g~ 290 (293)
+.+.+.++++.-. +--|. +.|.|.
T Consensus 96 ~~~~~~~ll~~~~~v~~~~~l~p~g~ 121 (124)
T 2omo_A 96 WRDTVADWMAEPRKGVIYGGLYPTGD 121 (124)
T ss_dssp HHHHHGGGBSSCCEEEEEEEEESCC-
T ss_pred HHHHHHHHhcCCcEEEEEEeecCCCC
Confidence 6778999987632 22222 445664
No 40
>4dpo_A Conserved protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.73A {Methanosarcina mazei}
Probab=96.69 E-value=0.018 Score=45.92 Aligned_cols=85 Identities=6% Similarity=0.068 Sum_probs=66.6
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.=++-++.|++- .++..+.+..+.+...+=||-+.+.+.++.. ++-.+.++-+++|.++++++...|..+++.
T Consensus 24 ~MI~via~~~vkpg~-~~~f~~~l~~~~~~~r~EpGcl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~f~~~~ 99 (119)
T 4dpo_A 24 LAIRVVAKNQVKPEK-VQEFMNLCKSLIEETLKEEGCIDYGVYQELE---NPEILTMLEEWKDEGSLDQHIRSDHFKEIF 99 (119)
T ss_dssp HCEEEEEEEEBCTTT-HHHHHHHHHHHHHHHHTSTTEEEEEEEEETT---EEEEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred ceEEEEEEEEECCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 489999999999884 4444444444444445689999999998764 356799999999999999999999999998
Q ss_pred HHhhccceee
Q 022676 152 KEHVMPYCHG 161 (293)
Q Consensus 152 ~~~i~p~~e~ 161 (293)
+. +.+.+++
T Consensus 100 ~~-~~~ll~~ 108 (119)
T 4dpo_A 100 PL-LSECLDK 108 (119)
T ss_dssp HH-HHHTBSS
T ss_pred HH-HHHHhcC
Confidence 76 4577664
No 41
>2pd1_A Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC72 2, protein structure initiative; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=96.66 E-value=0.026 Score=42.93 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=64.5
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.-++-++.|++-. ++..+.+..+.+...+=||-+.+.+.++ . +-++.++-+|+|.++++++...|..+++.
T Consensus 4 ~~i~v~~~~~vkpg~~-~~~~~~l~~~~~~~~~epG~l~~~~~~~-~----p~~~~~~E~w~~~~a~~~H~~s~~~~~~~ 77 (104)
T 2pd1_A 4 TKLALFVRLEAKPGQE-AALADFLASALPLANAESGTTAWFALKF-G----PSTFGVFDAFADEAGRQAHLNGQIAAALM 77 (104)
T ss_dssp CCEEEEEEEEBCTTCH-HHHHHHHHHTHHHHHTCTTEEEEEEEEC-S----SSEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred eEEEEEEEEEeCCCCH-HHHHHHHHHHHHHHhCCCCcEEEEEEec-C----CCEEEEEEEECCHHHHHHHhCCHHHHHHH
Confidence 3788899999998764 4444444444444455899999999887 3 35899999999999999999999999988
Q ss_pred HHhhccceee
Q 022676 152 KEHVMPYCHG 161 (293)
Q Consensus 152 ~~~i~p~~e~ 161 (293)
+. +.+.+++
T Consensus 78 ~~-~~~ll~~ 86 (104)
T 2pd1_A 78 AN-AATLLSS 86 (104)
T ss_dssp HH-HHHHBSS
T ss_pred HH-HHHHhcC
Confidence 75 4577665
No 42
>2gff_A LSRG protein; dimeric alpha+beta barrel ferredoxin fold, sugar binding protein; 1.75A {Yersinia pestis} PDB: 3qmq_A
Probab=96.65 E-value=0.019 Score=44.16 Aligned_cols=84 Identities=5% Similarity=-0.050 Sum_probs=62.7
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-|+.++.|++. .++..+++..+.+...+-|| .+++.+..+.. .+-+..++.+|+|.++++++...|..++ +
T Consensus 1 Mi~vi~~~~vkpg~-~~~~~~~~~~~~~~~r~epG-~l~~~~~~~~~---~p~~~~~~E~w~d~~a~~~h~~s~~~~~-~ 74 (106)
T 2gff_A 1 MHVTLVEINVKEDK-VDQFIEVFRANHLGSIREAG-NLRFDVLRDEH---IPTRFYIYEAYTDEAAVAIHKTTPHYLQ-C 74 (106)
T ss_dssp CEEEEEEEEBCGGG-HHHHHHHHHHHHHHHHTSTT-EEEEEEEEESS---CTTEEEEEEEESSHHHHHHHTTSHHHHH-H
T ss_pred CEEEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCC-cEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhcCHHHHH-H
Confidence 66677888887753 24444555555444456799 99999988753 2347889999999999999999996665 6
Q ss_pred Hhhhhccccc
Q 022676 268 SNKFQPIIRT 277 (293)
Q Consensus 268 ~~~v~p~~e~ 277 (293)
.+.+.++++.
T Consensus 75 ~~~~~~~l~~ 84 (106)
T 2gff_A 75 VEQLAPLMTG 84 (106)
T ss_dssp HHHHGGGBSS
T ss_pred HHHHHHHhcC
Confidence 6788999875
No 43
>1q8b_A Protein YJCS; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG, unknown function; 1.90A {Bacillus subtilis} SCOP: d.58.4.6
Probab=96.63 E-value=0.023 Score=43.87 Aligned_cols=88 Identities=6% Similarity=-0.156 Sum_probs=66.9
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-++.++.|++...++..+++..+.....+-|| .+++.+..+... .-+..++-+|+|.+++++....|..+ .+
T Consensus 13 mi~vi~~~~vkpg~d~~~f~~~l~~~~~~~r~epG-cl~~~~~~~~~~---p~~~~~~E~w~d~~a~~~H~~s~~~~-~~ 87 (105)
T 1q8b_A 13 MHYITACLKIISDKDLNEIMKEFKKLEEETNKEEG-CITFHAYPLEPS---ERKIMLWEIWENEEAVKIHFTKKHTI-DV 87 (105)
T ss_dssp EEEEEEEEEECCCSCHHHHHHHHHHHHHHHTTSTT-EEEEEEEECCGG---GCEEEEEEEESSHHHHHHHTTSHHHH-HH
T ss_pred EEEEEEEEEECCCCcHHHHHHHHHHHHHHHhcCCC-cEEEEEEEcCCC---CCEEEEEEEECCHHHHHHHhcCHHHH-HH
Confidence 67778888888875345666666666655567899 999998877532 23688999999999999999999554 57
Q ss_pred HhhhhccccceeE
Q 022676 268 SNKFQPIIRTQLP 280 (293)
Q Consensus 268 ~~~v~p~~e~i~v 280 (293)
.+.+.+++++.--
T Consensus 88 ~~~~~~~l~~~e~ 100 (105)
T 1q8b_A 88 QKQELTEVEWLMK 100 (105)
T ss_dssp HTTTCEEEEEEEE
T ss_pred HHHHHHHhhChhh
Confidence 7888888876543
No 44
>1x7v_A PA3566 protein, APC5058; structural genomics, protein structure initiative, midwest center for structural genomics, alpha-beta plait, PSI; 1.78A {Pseudomonas aeruginosa} SCOP: d.58.4.11
Probab=96.62 E-value=0.043 Score=41.16 Aligned_cols=90 Identities=10% Similarity=0.093 Sum_probs=66.0
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-++.++.|++. .++..+++..+.....+-|| .+++.+..+.. ..-+..++.+|+|.+++++....|..++ +
T Consensus 6 mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG-~l~~~~~~~~~---~p~~~~~~e~w~~~~a~~~h~~s~~~~~-~ 79 (99)
T 1x7v_A 6 PLTLIATITAAPGH-AEALERELRALVAPSRAEAG-CLQYDLHQDRH---DSHLFYMIEQWRDDAALERHQNTEHFLR-F 79 (99)
T ss_dssp CEEEEEEEEECTTC-HHHHHHHHHHHHHHHHHSTT-EEEEEEEECSS---CTTEEEEEEEESSHHHHHHHHTSHHHHH-H
T ss_pred cEEEEEEEEECCCC-HHHHHHHHHHHHHHHhCCCC-ceEEEEEecCC---CCCEEEEEEEECCHHHHHHHhcCHHHHH-H
Confidence 67788888888765 34455555555555567899 99999887753 2346789999999999999999996655 7
Q ss_pred HhhhhccccceeEEee
Q 022676 268 SNKFQPIIRTQLPVHF 283 (293)
Q Consensus 268 ~~~v~p~~e~i~vvDy 283 (293)
.+.+.++++...+.-|
T Consensus 80 ~~~~~~~~~~~~v~~~ 95 (99)
T 1x7v_A 80 SRGNEALLQNVKIDQL 95 (99)
T ss_dssp HTTCGGGEEEEEEEEE
T ss_pred HHHHHHhcCCceEEEE
Confidence 7788888555444433
No 45
>2pd1_A Hypothetical protein; unknown function, NE2512 protein, structural genomics, APC72 2, protein structure initiative; 1.86A {Nitrosomonas europaea} SCOP: d.58.4.11
Probab=96.60 E-value=0.028 Score=42.75 Aligned_cols=82 Identities=7% Similarity=-0.063 Sum_probs=61.3
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-++.++.|++.. ++..+++..+.....+-|| .+++.+-.+ . +-+..++-+|+|.++++++...|..++ +
T Consensus 5 ~i~v~~~~~vkpg~~-~~~~~~l~~~~~~~~~epG-~l~~~~~~~-~----p~~~~~~E~w~~~~a~~~H~~s~~~~~-~ 76 (104)
T 2pd1_A 5 KLALFVRLEAKPGQE-AALADFLASALPLANAESG-TTAWFALKF-G----PSTFGVFDAFADEAGRQAHLNGQIAAA-L 76 (104)
T ss_dssp CEEEEEEEEBCTTCH-HHHHHHHHHTHHHHHTCTT-EEEEEEEEC-S----SSEEEEEEEESSHHHHHHHHTSHHHHH-H
T ss_pred EEEEEEEEEeCCCCH-HHHHHHHHHHHHHHhCCCC-cEEEEEEec-C----CCEEEEEEEECCHHHHHHHhCCHHHHH-H
Confidence 567777788877553 4444555554444456799 999999887 3 337889999999999999999996655 7
Q ss_pred Hhhhhccccc
Q 022676 268 SNKFQPIIRT 277 (293)
Q Consensus 268 ~~~v~p~~e~ 277 (293)
.+.+.+++++
T Consensus 77 ~~~~~~ll~~ 86 (104)
T 2pd1_A 77 MANAATLLSS 86 (104)
T ss_dssp HHHHHHHBSS
T ss_pred HHHHHHHhcC
Confidence 7788888876
No 46
>3gz7_A Putative antibiotic biosynthesis monooxygenase; NP_888398.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.15A {Bordetella bronchiseptica}
Probab=96.45 E-value=0.043 Score=43.58 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=67.8
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHH-hhcCChhHH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFE-MFVGSSDYK 264 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald-~Y~~hp~H~ 264 (293)
..||.=|+.++.|++.. ++.++++..+.....+-|| .+++.+..+... .=++.++.+++|.++++ .|...|..+
T Consensus 18 ~~~i~via~~~vkpg~~-~~f~~~~~~~~~~~r~epG-cl~y~l~r~~~~---p~~f~~~E~W~s~eal~~hf~~S~hf~ 92 (115)
T 3gz7_A 18 QGMIQEIASILVQPGRE-ADFEAGVAQARPLFMRARG-CHGVALHRSIEA---PQRYTLVVDWETVDNHMVDFRQSADFQ 92 (115)
T ss_dssp CSCEEEEEEEEBCTTCH-HHHHHHHHHHHHHHHTSTT-EEEEEEEEESSS---TTEEEEEEEESSHHHHHTTTTTSHHHH
T ss_pred ceEEEEEEEEEECCCCH-HHHHHHHHHHHHHHhcCCC-eEEEEEEecCCC---CCEEEEEEEECCHHHHHHHHhcCHHHH
Confidence 45888888899998654 4455555555555666799 999999987642 23578999999999999 679999666
Q ss_pred HHHHhhhhccccceeEE
Q 022676 265 EMWSNKFQPIIRTQLPV 281 (293)
Q Consensus 265 ~~~~~~v~p~~e~i~vv 281 (293)
+ +.+.+.|+++.--.+
T Consensus 93 ~-~~~~~~~ll~~~p~i 108 (115)
T 3gz7_A 93 E-WRKLVGECFAEPPQV 108 (115)
T ss_dssp H-HHHHHGGGBSSCCEE
T ss_pred H-HHHHHHHHhcCCCEE
Confidence 5 778999998865333
No 47
>1y0h_A Hypothetical protein RV0793; ferredoxin-like fold, alpha+beta sandwich with antiparallel sheet, structural genomics, PSI; 1.60A {Mycobacterium tuberculosis} SCOP: d.58.4.11
Probab=96.44 E-value=0.027 Score=42.51 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=61.7
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
.||.-++.++.|++. .++..+++..+.....+-|| .+++.+..+ .. .-+..++.+|+|.+++++....|..++
T Consensus 4 ~mi~v~~~~~vkpg~-~~~~~~~~~~~~~~~~~epG-~l~~~~~~~-~~---~~~~~~~e~w~~~~a~~~h~~s~~~~~- 76 (102)
T 1y0h_A 4 SPVAVIARFMPRPDA-RSALRALLDAMITPTRAEDG-CRSYDLYES-AD---GGELVLFERYRSRIALDEHRGSPHYLN- 76 (102)
T ss_dssp SCEEEEEEECBCGGG-HHHHHHHHHHHHHHHHHSTT-EEEEEEEEE-TT---SSCEEEEEEESSHHHHHHHHTSHHHHH-
T ss_pred ceEEEEEEEEECCCc-HHHHHHHHHHHHHHHhcCCC-cEEEEEEEe-CC---CCEEEEEEEECCHHHHHHHhcChHHHH-
Confidence 367777777777653 24444454544444456799 999999987 42 235779999999999999999996655
Q ss_pred HHhhhhccccc
Q 022676 267 WSNKFQPIIRT 277 (293)
Q Consensus 267 ~~~~v~p~~e~ 277 (293)
+.+.+.+++++
T Consensus 77 ~~~~~~~~l~~ 87 (102)
T 1y0h_A 77 YRAQVGELLTR 87 (102)
T ss_dssp HHTTSGGGBSS
T ss_pred HHHHHHHHhcC
Confidence 77789999876
No 48
>3f44_A Putative monooxygenase; YP_193413.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.55A {Lactobacillus acidophilus ncfm}
Probab=96.43 E-value=0.023 Score=50.11 Aligned_cols=104 Identities=12% Similarity=0.059 Sum_probs=80.7
Q ss_pred cCCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 69 KKRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
....||..|+-++.|++-.++-.+.+.+.+.+...+=||-+.+.+.++.. +.-.+.++-+++|.+++++....|..+
T Consensus 112 ~~~~mI~~ia~~~vkpg~~~~f~~~l~~~~~~~~r~EpGcl~y~~~~d~~---~p~~f~~~E~w~d~~Al~aH~~s~hf~ 188 (220)
T 3f44_A 112 YADNFVMRLIKVEVKDADAEKFSHAVKKEMTTSMASEPGMEIMMSGTNID---NPNEWYFIEVYANDEAYDIHVKTPHYK 188 (220)
T ss_dssp --CCCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHCTTEEEEEEEEETT---EEEEEEEEEEESSHHHHHHHTTSHHHH
T ss_pred CCCceEEEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCcEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHhcCHHHH
Confidence 35689999999999987544444444345555445579999999998764 357899999999999999999999999
Q ss_pred HHHHHhhccceeeeeeeeeecccCCCccccccCC
Q 022676 149 KVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKG 182 (293)
Q Consensus 149 ~vv~~~i~p~~e~~~vvDye~~v~~~~~~~~~~g 182 (293)
++.+. +.+.+++..+..+++ .++..+|
T Consensus 189 ~~~~~-~~~ll~~~~v~~l~p------~~l~~~g 215 (220)
T 3f44_A 189 EYIEE-TDGMVKSRDVKTLVR------DTLATQG 215 (220)
T ss_dssp HHHHH-TTTTEEEEEEEEEEE------EEEEESS
T ss_pred HHHHH-HHHHhcCCceEEeec------hhhhhcc
Confidence 99875 679999998888876 4455566
No 49
>1iuj_A Hypothetical protein TT1380; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.60A {Thermus thermophilus} SCOP: d.58.4.5
Probab=96.38 E-value=0.023 Score=43.18 Aligned_cols=91 Identities=18% Similarity=0.089 Sum_probs=61.6
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.=|+.++.+++. .++..+.+..+.....+.|| .+++.+..+... .-++.++.+|+|.++++++..+|.+++ +
T Consensus 1 Mi~vi~~~~v~~g~-~~~f~~~~~~~~~~~~~~pG-~l~~~l~~~~~~---~~~~~~~~~W~s~~a~~a~~~s~~~~~-~ 74 (106)
T 1iuj_A 1 MFVTMNRIPVRPEY-AEQFEEAFRQRARLVDRMPG-FIRNLVLRPKNP---GDPYVVMTLWESEEAFRAWTESPAFKE-G 74 (106)
T ss_dssp CEEEEEEECBCGGG-HHHHHHHHHHHGGGGTTSTT-EEEEEEEEESST---TSCEEEEEEESCHHHHHHHHTSHHHHH-H
T ss_pred CEEEEEEEEeCcch-HHHHHHHHHHHHHHhccCCC-ceEEEEEecCCC---CCeEEEEEEECCHHHHHHHhcCHHHHH-H
Confidence 55556666666643 24444555555455556799 999999887642 236789999999999999999998776 5
Q ss_pred Hhhhh----ccccc-eeEEeeE
Q 022676 268 SNKFQ----PIIRT-QLPVHFS 284 (293)
Q Consensus 268 ~~~v~----p~~e~-i~vvDy~ 284 (293)
.+.+. +++.. .-+.-|+
T Consensus 75 ~~~~~~~~~~~~~~~~~v~~~~ 96 (106)
T 1iuj_A 75 HARSGTLPKEAFLGPNRLEAFE 96 (106)
T ss_dssp TTTTSSSSCSCBSSCCEEEEEE
T ss_pred HhccccCCcccccCCCceEEEE
Confidence 56776 66543 3343444
No 50
>3kg0_A Snoab; polyketide, anthracycline, oxygenase, cofactor-independent, oxidoreductase; 1.70A {Streptomyces nogalater} PDB: 3kg1_A 3kng_A
Probab=96.38 E-value=0.026 Score=45.82 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=67.3
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.=|..|+.+++ .++.++.+..+.++..+.|| .++++.-.+.. ..-.+.++.+++|.++++++..+|.+++ +
T Consensus 23 mi~via~~~V~pg--~~~f~~~~~~~~~~~~~~pG-fi~~~L~r~~~---~p~~yv~~~~W~s~ea~~a~~~S~~f~a-~ 95 (128)
T 3kg0_A 23 EVTFVNRFTVHGA--PAEFESVFARTAAFFARQPG-FVRHTLLRERD---KDNSYVNIAVWTDHDAFRRALAQPGFLP-H 95 (128)
T ss_dssp CEEEEEEEEECSC--HHHHHHHHHHHHHHHHTSTT-EEEEEEEECTT---CSSEEEEEEEESSHHHHHHHHHCGGGHH-H
T ss_pred cEEEEEEEEeCCC--HHHHHHHHHHHHHHHhcCCC-ccEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH-H
Confidence 7788899999998 77788888888888788999 99988877653 2346789999999999999999998886 5
Q ss_pred Hhhhhcccc
Q 022676 268 SNKFQPIIR 276 (293)
Q Consensus 268 ~~~v~p~~e 276 (293)
.+.+.+++.
T Consensus 96 ~~~l~~~~~ 104 (128)
T 3kg0_A 96 ATALRALST 104 (128)
T ss_dssp HHHHHHHEE
T ss_pred HHhhhhhcc
Confidence 567777654
No 51
>2ril_A Antibiotic biosynthesis monooxygenase; YP_001095275.1, putative monooxygenase, antibiotic biosynthe monooxygenase, structural genomics; HET: MSE; 1.26A {Shewanella loihica}
Probab=96.36 E-value=0.029 Score=42.71 Aligned_cols=71 Identities=15% Similarity=0.066 Sum_probs=55.3
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccC
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYEN 144 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~H 144 (293)
.||.-|..|+.|++. .++..+.+..+.....+-||-+..++.+.... .+.|.++++.+++|.|++++-..|
T Consensus 4 ~mi~~i~~~~v~pg~-~~~f~~~~~~~~~~~~~~pG~i~~~l~~~~~~-~~~~~~~~~~~W~s~ea~~a~~~~ 74 (99)
T 2ril_A 4 APVTLINPFKVPADK-LEAAIEYWEAHRDFMAQQPGYLSTQLHQSIDE-GATYQLINVAIWQSEADFYQAAQK 74 (99)
T ss_dssp CCEEEEEEEBCCTTC-HHHHHHHHHHHHHHHTTSTTEEEEEEEECSST-TSSCSEEEEEEESCHHHHHHHHHH
T ss_pred ceEEEEEEEEECCcc-HHHHHHHHHHHHHHHhcCCCeeeEEEeecCCC-CCeEEEEEEEEECCHHHHHHHHHh
Confidence 489999999999885 44555555555555556999999999987653 455778999999999999995555
No 52
>2ftr_A BH0200; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.40A {Bacillus halodurans} SCOP: d.58.4.15
Probab=96.35 E-value=0.015 Score=45.74 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=58.6
Q ss_pred CcEEEEEEEEecCCCCHHHHH-HHHHHHHhhhhcCCceEEEEEeecCC--CCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 72 KVVEHICLLKAKKDLSEEEEK-DMLDYLYTSQYQMGGIVAISLGRISN--ENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~-~~~~~L~~L~~~IPgv~~i~~G~~~s--~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
.||+.+||++-+++ .++.. -..+.-..|..++||++.+.+..... ....+|+.+..+.|+|.|++++....|+-+
T Consensus 7 ~Mik~~vly~~~~~--~e~F~~yy~~~H~PL~~~~pgl~~y~~~~~~~~~~~~~~yd~iael~fds~ea~~aa~~s~e~~ 84 (108)
T 2ftr_A 7 MMVKLIALYEQPED--KQAFDEHYFNTHAPLTRKIPGLRDMKVTRIVGSPMGESKFYLMCEMYYDDHESLQQAMRTDEGK 84 (108)
T ss_dssp EEEEEEEEEECCSC--HHHHHHHHHHTHHHHHTTSTTCCEEEEEEEEEBTTBCCSEEEEEEEEESSHHHHHHHHHSHHHH
T ss_pred ceEEEEEEEeCCCC--HHHHHHHHHHhhHHHHhhCCCceEEEEEeccCCCCCCCCeeEEEEEEECCHHHHHHHHcCHhHH
Confidence 48999999997775 44433 33344445777899999987664321 123479999999999999999999888777
Q ss_pred HHHHH
Q 022676 149 KVLKE 153 (293)
Q Consensus 149 ~vv~~ 153 (293)
++.+.
T Consensus 85 ~~~~D 89 (108)
T 2ftr_A 85 ASGKD 89 (108)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 53
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=96.34 E-value=0.046 Score=43.49 Aligned_cols=80 Identities=9% Similarity=0.098 Sum_probs=68.7
Q ss_pred EEEEEEecCCCCHHHHHHHHHHH-HhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHHHh
Q 022676 76 HICLLKAKKDLSEEEEKDMLDYL-YTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEH 154 (293)
Q Consensus 76 HIVlfK~K~~~s~e~~~~~~~~L-~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~~~ 154 (293)
=|++++||++.+++..+.+.... ..+..++|+|+++.+-+......-.|.++=++.++|.|+...=...|.-+++++++
T Consensus 4 iv~~i~L~~g~d~~aFe~w~~evD~P~~~~LpsVrsF~V~R~~~~g~~py~yiEvi~v~s~eaf~~~m~S~~~~~~~~dF 83 (105)
T 2jdj_A 4 IIHKIRLFDVAQADAFEFWVQNVDYATCPDLPSVVRFDVHRASLQANAPYHYVEVIKITDRAAFDADMETSTFAGLVQAF 83 (105)
T ss_dssp EEEEEEESCGGGHHHHHHHHHHTHHHHGGGCTTEEEEEEEECCCCTTCSCSEEEEEEESCHHHHHHHHTSHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHhchhhhccCCCcceeEEEEecccCCCCCeeEEEEEecCCHHHHHHHhcCHHHHHHHHHH
Confidence 47899999999999988886655 34777899999999998776534579999999999999999999999999999886
Q ss_pred h
Q 022676 155 V 155 (293)
Q Consensus 155 i 155 (293)
.
T Consensus 84 ~ 84 (105)
T 2jdj_A 84 S 84 (105)
T ss_dssp H
T ss_pred H
Confidence 3
No 54
>2zdo_A Heme-degrading monooxygenase ISDG; ruffling, protein-substrate complex, cytoplasm, iron, metal-binding, oxidoreductase; HET: HEM; 1.80A {Staphylococcus aureus} PDB: 1xbw_A
Probab=96.24 E-value=0.011 Score=45.82 Aligned_cols=77 Identities=6% Similarity=0.063 Sum_probs=59.7
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHH
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLK 152 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~ 152 (293)
||.=|.-++.|++-.++ ..+.+..+ ....+.||-+.+++-++... .++-.+.++++++|+|+++++...|.|++..+
T Consensus 4 Mi~vi~~~~v~pg~~~~-f~~~~~~~-~~~~~~pG~i~~~l~r~~~~-~~~~~~~~~~~W~s~ea~~a~~~s~~f~~~~~ 80 (109)
T 2zdo_A 4 KFMAEARLTLTKGTAKD-IIERFYTR-HGIETLEGFDGMFVTQTLEQ-EDFDEVKILTVWKSKQAFTDWLKSDVFKAAHK 80 (109)
T ss_dssp CEEEEEEEEEETTCHHH-HHHHTTSC-CSGGGCTTEEEEEEEEETTC-SSEEEEEEEEEESCHHHHHHHHTSHHHHHHHT
T ss_pred EEEEEEEEEeCCCCHHH-HHHHHhcc-cccccCCCeEEEEEEecCCC-CCceEEEEEEEECCHHHHHHHHcCHHHHHHHH
Confidence 78888899998876444 44443444 55556999999999987753 22247999999999999999999999999765
No 55
>3bm7_A Protein of unknown function with ferredoxin-like; ferredoxin-like fold, antibiotic biosynthesis monooxygenase, structural genomics; HET: MSE; 1.35A {Caulobacter crescentus}
Probab=96.22 E-value=0.056 Score=42.47 Aligned_cols=89 Identities=12% Similarity=0.083 Sum_probs=64.9
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHH-HhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLK-RLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~-~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
||.-++.++.|++.. ++..+++..+. +...+-|| .+++.+..+... .-+..++.+|+|.+++++....|..++
T Consensus 20 ~i~vi~~~~vkpg~~-~~f~~~l~~~~~~~~r~EpG-cl~y~l~~~~~~---p~~f~~~E~W~d~ea~~aH~~s~~~~~- 93 (115)
T 3bm7_A 20 MIGVVATLKVQPAKA-AEFEKVFLDLAAKVKANEPG-CLVYQLTRSKTE---EGVYKVLELYASMDALKHHGGTDYFKA- 93 (115)
T ss_dssp CEEEEEEEEECGGGH-HHHHHHHHHHHHHHHHHCTT-EEEEEEEECSSS---TTEEEEEEEESSHHHHHHHHHCHHHHH-
T ss_pred cEEEEEEEEECCCCH-HHHHHHHHHHHHHHhcCCCC-cEEEEEEEcCCC---CCEEEEEEEECCHHHHHHHhCCHHHHH-
Confidence 777788888887542 33444444444 44455799 999999887532 237889999999999999999996665
Q ss_pred HHhhhhccccceeEEe
Q 022676 267 WSNKFQPIIRTQLPVH 282 (293)
Q Consensus 267 ~~~~v~p~~e~i~vvD 282 (293)
+.+.+.+++++-..+.
T Consensus 94 ~~~~~~~ll~~~~~i~ 109 (115)
T 3bm7_A 94 AGAAMGPTMAGAPVIE 109 (115)
T ss_dssp HHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHhcCCcEEE
Confidence 6678899988754444
No 56
>3hf5_A 4-methylmuconolactone methylisomerase; ferredoxin, ferredoxin-like fold, beta-barrel, biodegradation, ortho- cleavage; HET: 3ML; 1.40A {Pseudomonas reinekei} SCOP: d.58.4.19 PDB: 3hds_A* 3hfk_A* 2ifx_A*
Probab=96.16 E-value=0.034 Score=44.69 Aligned_cols=83 Identities=12% Similarity=0.144 Sum_probs=63.8
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCC-C--------CCCCccEEEEEEECCHHHHHh
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISN-E--------NVENYTHGVFMRFQRKEHLVK 140 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s-~--------~~~gythaL~s~F~s~edL~~ 140 (293)
..+||+-+.+.+=|++.|.|+..+--..=..|...+||++......... + ....||-+--+-|+|.+|+++
T Consensus 7 ~~rMiKli~ll~Rk~gmS~EeF~~~w~~Hapla~~lpGl~~Y~q~~v~~~~~~~~~~~~~~~~~DgiaElwF~d~ea~~a 86 (116)
T 3hf5_A 7 EGRMIRILYLLVKPESMSHEQFRKECVVHFQMSAGMPGLHKYEVRLVAGNPTDTHVPYLDVGRIDAIGECWFASEEQYQV 86 (116)
T ss_dssp HHTSEEEEEEEECCTTSCHHHHHHHHHHHHHHTTTCTTCSEEEEEEEEECCCCCSSCBCCCCCCCEEEEEEESSHHHHHH
T ss_pred cCceEEEEEEEecCCCcCHHHHHHHHHHHHHHHHhCcCCccEEEEEEecCCCCCCCCcCCCCCcCEEEEEEECCHHHHHH
Confidence 3579999999999999999996554444445666789988776443211 1 012799999999999999999
Q ss_pred hccCcchHHHHH
Q 022676 141 FYENPFYSKVLK 152 (293)
Q Consensus 141 Y~~HP~H~~vv~ 152 (293)
....|+.++..+
T Consensus 87 a~~sp~~~a~~~ 98 (116)
T 3hf5_A 87 YMESDIRKAWFE 98 (116)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHh
Confidence 999999988654
No 57
>2bbe_A Hypothetical protein SO0527; MCSG, structural genomics, PSI, protein structure in midwest center for structural genomics; 1.97A {Shewanella oneidensis}
Probab=96.14 E-value=0.057 Score=41.56 Aligned_cols=86 Identities=12% Similarity=0.069 Sum_probs=63.4
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-++.++.|++.. ++..+++..+.....+-|| .+++.+..+.. .+-+..++.+|+|.+++++....|..++.+
T Consensus 13 mi~v~~~~~vkpg~~-~~f~~~~~~~~~~~~~epG-cl~~~~~~~~~---~p~~~~~~E~w~~~~a~~~H~~s~~~~~~~ 87 (108)
T 2bbe_A 13 QIVCVASFLSKEGKT-EALIAALASLIPDTRREAG-CIRYELNVSRD---EPRRVTFVEKFVDIAAFDEHCAKDAIQHYF 87 (108)
T ss_dssp SEEEEEEEEECTTCH-HHHHHHHHTTHHHHHTSTT-EEEEEEEECSS---STTEEEEEEEESSHHHHHHHHTSHHHHHHH
T ss_pred EEEEEEEEEECCCcH-HHHHHHHHHHHHHHhcCCC-cEEEEEEecCC---CCCEEEEEEEECCHHHHHHHhcChHHHHHH
Confidence 788888888887643 4444444444444456799 99999887753 234688999999999999999999554427
Q ss_pred Hhhhhccccce
Q 022676 268 SNKFQPIIRTQ 278 (293)
Q Consensus 268 ~~~v~p~~e~i 278 (293)
.+.+.+++++.
T Consensus 88 ~~~~~~~l~~~ 98 (108)
T 2bbe_A 88 HQVMPELVESF 98 (108)
T ss_dssp HHTHHHHEEEE
T ss_pred HHHHHHhcccc
Confidence 77889998873
No 58
>1sqe_A Hypothetical protein PG130; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Staphylococcus aureus} SCOP: d.58.4.5 PDB: 2zdp_A* 3lgm_A* 3lgn_A* 3qgp_A*
Probab=96.01 E-value=0.015 Score=44.96 Aligned_cols=78 Identities=9% Similarity=0.128 Sum_probs=58.5
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.=|.-|++|++-.+ +..+.+..+ ....+.||-+.+++.++... .+.-.+.++.+++|.++++++...|.|++..
T Consensus 1 ~Mi~vi~~~~v~pg~~~-~f~~~~~~~-~~~~~~pG~l~~~l~r~~~~-~~~~~~~~~~~W~s~ea~~a~~~s~~f~~~~ 77 (109)
T 1sqe_A 1 HMFMAENRLQLQKGSAE-ETIERFYNR-QGIETIEGFQQMFVTKTLNT-EDTDEVKILTIWESEDSFNNWLNSDVFKEAH 77 (109)
T ss_dssp CCEEEEEEEEECTTCHH-HHGGGGGCC-TTGGGSTTEEEEEEEEETTC-SSSEEEEEEEEESCHHHHHHHHTSHHHHHCC
T ss_pred CEEEEEEEEEECCCcHH-HHHHHHhcc-cccccCCCeEEEEEEEcCCC-CCCcEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 37888888999887543 344443444 55566899999999987753 2225789999999999999999999988754
Q ss_pred H
Q 022676 152 K 152 (293)
Q Consensus 152 ~ 152 (293)
+
T Consensus 78 ~ 78 (109)
T 1sqe_A 78 K 78 (109)
T ss_dssp -
T ss_pred h
Confidence 4
No 59
>4dpo_A Conserved protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.73A {Methanosarcina mazei}
Probab=95.98 E-value=0.055 Score=42.99 Aligned_cols=85 Identities=8% Similarity=0.015 Sum_probs=64.0
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.-++.++.|++. .++..+++..+.+...+-|| .+++.+..+.. +.-+..++-+++|.++++++...|..++ +
T Consensus 25 MI~via~~~vkpg~-~~~f~~~l~~~~~~~r~EpG-cl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~f~~-~ 98 (119)
T 4dpo_A 25 AIRVVAKNQVKPEK-VQEFMNLCKSLIEETLKEEG-CIDYGVYQELE---NPEILTMLEEWKDEGSLDQHIRSDHFKE-I 98 (119)
T ss_dssp CEEEEEEEEBCTTT-HHHHHHHHHHHHHHHHTSTT-EEEEEEEEETT---EEEEEEEEEEESSHHHHHHHHTSHHHHH-H
T ss_pred eEEEEEEEEECCCc-HHHHHHHHHHHHHHHhcCCC-cEEEEEEEcCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH-H
Confidence 77788888888763 34444555555544456799 99999988753 3346889999999999999999996665 7
Q ss_pred Hhhhhccccce
Q 022676 268 SNKFQPIIRTQ 278 (293)
Q Consensus 268 ~~~v~p~~e~i 278 (293)
.+.+.++++.-
T Consensus 99 ~~~~~~ll~~~ 109 (119)
T 4dpo_A 99 FPLLSECLDKE 109 (119)
T ss_dssp HHHHHHTBSSC
T ss_pred HHHHHHHhcCC
Confidence 77889998843
No 60
>4hl9_A Antibiotic biosynthesis monooxygenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.93A {Rhodospirillum rubrum}
Probab=95.94 E-value=0.061 Score=43.04 Aligned_cols=93 Identities=9% Similarity=-0.058 Sum_probs=69.6
Q ss_pred CCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHH
Q 022676 71 RKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKV 150 (293)
Q Consensus 71 ~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~v 150 (293)
+.||.=|.-++.|++-- ++..++++.+.+.-.+=||-+.+.+.++.. +.-.+.++-+++|+++++++...|..+++
T Consensus 21 ~sMi~viA~~~vkP~~~-d~~~~~~~~l~~~tr~EpGcl~y~l~~d~~---dp~~f~~~E~w~d~~al~~H~~s~h~~~~ 96 (118)
T 4hl9_A 21 QSMLKVIAQDFIKPEAI-DIVLPLYRELVEKTRQEPLCLAYDLFVDQK---DPGHFVFIEEWPDRAALDIHCATEHFTRL 96 (118)
T ss_dssp --CEEEEEEEEECGGGH-HHHHHHHHHHHHHHHTSTTCCEEEEEEETT---EEEEEEEEEEESSHHHHHHHHHSHHHHHH
T ss_pred heeeEEEEEEEECchhH-HHHHHHHHHHHHHHhcCCCcEEEEEEEcCC---CCCEEEEEEEeCCHHHHHHHHCCHHHHHH
Confidence 46899899999998753 344444444444444579999999998764 35678999999999999999999999999
Q ss_pred HHHhhccceeeeeeeeee
Q 022676 151 LKEHVMPYCHGLMNVDYE 168 (293)
Q Consensus 151 v~~~i~p~~e~~~vvDye 168 (293)
++. +.++..+-..|.+-
T Consensus 97 ~~~-l~~~l~~~~~i~~l 113 (118)
T 4hl9_A 97 VPL-INAHQRQDGTVVLM 113 (118)
T ss_dssp HHH-HHTTEEEEEEEEEE
T ss_pred HHH-HHHHhcCCCEEEEE
Confidence 876 56887766555543
No 61
>2go8_A Hypothetical protein YQJZ; SR435, protein structure, structural genomics, PSI, protein initiative, northeast structural genomics consortium; 2.30A {Bacillus subtilis} SCOP: d.58.4.5
Probab=95.73 E-value=0.023 Score=46.30 Aligned_cols=75 Identities=4% Similarity=0.027 Sum_probs=50.9
Q ss_pred CCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHH
Q 022676 71 RKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKV 150 (293)
Q Consensus 71 ~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~v 150 (293)
..|+ .|+|..++....+.-.++.+.+.++..++||-++++.-++. +| -..-++.++|.|++++...||+|++.
T Consensus 11 ~pm~--aViFe~~~~~~~~~Y~~la~~~~~la~~qpGFI~~Es~~~~----dg-~~is~SyW~deeai~aW~~~~eHr~A 83 (122)
T 2go8_A 11 PPYY--AVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREA----DG-RGITVSYWDSMDAINHWRHHTEHQAA 83 (122)
T ss_dssp SCEE--EEEEEEECC------CHHHHHHHHHHHHSTTEEEEEEEECT----TS-EEEEEEEESCHHHHHHHHHHC-----
T ss_pred CCEE--EEEEEEEeCCchhHHHHHHHHHHHHHhhCCCceEEEEEEcC----CC-CEEEEEEeCCHHHHHHHHhCHHHHHH
Confidence 4454 56888888766667788889999999999999999955433 24 67778999999999999999999985
Q ss_pred HH
Q 022676 151 LK 152 (293)
Q Consensus 151 v~ 152 (293)
.+
T Consensus 84 q~ 85 (122)
T 2go8_A 84 KE 85 (122)
T ss_dssp --
T ss_pred HH
Confidence 43
No 62
>4hl9_A Antibiotic biosynthesis monooxygenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.93A {Rhodospirillum rubrum}
Probab=95.69 E-value=0.057 Score=43.24 Aligned_cols=92 Identities=8% Similarity=-0.046 Sum_probs=64.2
Q ss_pred ccceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHH
Q 022676 186 NFGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKE 265 (293)
Q Consensus 186 ~~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~ 265 (293)
..||.=|..++.|++.- ++..++++.+.+...+=|| .+++.+-.+... .=+..++-.++|.+|++++...|..++
T Consensus 21 ~sMi~viA~~~vkP~~~-d~~~~~~~~l~~~tr~EpG-cl~y~l~~d~~d---p~~f~~~E~w~d~~al~~H~~s~h~~~ 95 (118)
T 4hl9_A 21 QSMLKVIAQDFIKPEAI-DIVLPLYRELVEKTRQEPL-CLAYDLFVDQKD---PGHFVFIEEWPDRAALDIHCATEHFTR 95 (118)
T ss_dssp --CEEEEEEEEECGGGH-HHHHHHHHHHHHHHHTSTT-CCEEEEEEETTE---EEEEEEEEEESSHHHHHHHHHSHHHHH
T ss_pred heeeEEEEEEEECchhH-HHHHHHHHHHHHHHhcCCC-cEEEEEEEcCCC---CCEEEEEEEeCCHHHHHHHHCCHHHHH
Confidence 45888888899988542 3333444444444445599 999998887542 245779999999999999999995555
Q ss_pred HHHhhhhccccceeEEee
Q 022676 266 MWSNKFQPIIRTQLPVHF 283 (293)
Q Consensus 266 ~~~~~v~p~~e~i~vvDy 283 (293)
+.+.+.++++.-..+.+
T Consensus 96 -~~~~l~~~l~~~~~i~~ 112 (118)
T 4hl9_A 96 -LVPLINAHQRQDGTVVL 112 (118)
T ss_dssp -HHHHHHTTEEEEEEEEE
T ss_pred -HHHHHHHHhcCCCEEEE
Confidence 77799998875544433
No 63
>4dn9_A Antibiotic biosynthesis monooxygenase; structural genomics,protein structure initiative, NEW YORK S genomix research consortium, nysgrc; 2.05A {Chloroflexus aurantiacus}
Probab=95.55 E-value=0.13 Score=41.15 Aligned_cols=88 Identities=9% Similarity=0.007 Sum_probs=67.7
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
...||.=|+-++.|++-.++-.+.++ +...+-||-+.+.+.++.. +.-.+.++-+++|.++++++...|..++
T Consensus 20 ~~~Mi~via~~~vkpg~~~ef~~~l~----~~~r~EpGcl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~f~~ 92 (122)
T 4dn9_A 20 FQSMYGLIGKMRATPGQRDALIAILV----EGASSMPGCLSYVVAQDPK---DPDAIWITEVWDSPESHKASLSLPSVQD 92 (122)
T ss_dssp --CCEEEEEEEEESTTCHHHHHHHHH----HHTTTCTTEEEEEEEEETT---EEEEEEEEEEESCHHHHHHGGGSHHHHH
T ss_pred CCCcEEEEEEEEECCCCHHHHHHHHH----HHHhCCCCCEEEEEEecCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH
Confidence 45589999999999886555444443 2233579999999998764 3567899999999999999999999999
Q ss_pred HHHHhhccceeeeeee
Q 022676 150 VLKEHVMPYCHGLMNV 165 (293)
Q Consensus 150 vv~~~i~p~~e~~~vv 165 (293)
+.+. +.+.+++.-.+
T Consensus 93 ~~~~-~~~ll~~~p~i 107 (122)
T 4dn9_A 93 AIAC-GRPLIAALDEH 107 (122)
T ss_dssp HHHH-HGGGEEEEEEE
T ss_pred HHHH-HHHHhcCCCee
Confidence 9876 57888876444
No 64
>3tvz_A Putative uncharacterized protein YHGC; putative monooxygenase, ABM family, ferredoxin fold, monooxy oxidoreductase; 2.00A {Bacillus subtilis subsp}
Probab=95.45 E-value=0.073 Score=45.37 Aligned_cols=79 Identities=10% Similarity=0.042 Sum_probs=52.1
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
...|+.-|.-++++++-.++ ..+..........+.||-+++++-+.... -++.++++++|+|+++++..+|+|++
T Consensus 68 ~~~m~~vin~~~V~pg~~~~-Fe~~~~~~~~~l~~~pGfi~~~llr~~~~----~~y~~~t~Wes~eaf~aw~~S~~f~~ 142 (172)
T 3tvz_A 68 KHPGFAVLNNIAVTQEGRPL-FENKFKNRAGKVENEPGFEAIRVLRPLDS----DTYVILTLWETERAFQDWQQSDSYKE 142 (172)
T ss_dssp SCCSEEEEEEEECCGGGHHH-HHHHHTSSHHHHTTSTTEEEEEEEEESSS----SEEEEEEEESCHHHHHHHTCC-----
T ss_pred CCCcEEEEEEEEcCCCcHHH-HHHHHHHhHHHHhcCCCceEEEEEecCCC----CEEEEEEEECCHHHHHHHHcCHHHHH
Confidence 45788888888887764433 33333333344556999999999876642 46889999999999999999999998
Q ss_pred HHHH
Q 022676 150 VLKE 153 (293)
Q Consensus 150 vv~~ 153 (293)
..+.
T Consensus 143 ah~~ 146 (172)
T 3tvz_A 143 AHKK 146 (172)
T ss_dssp ----
T ss_pred HHHh
Confidence 6543
No 65
>3hf5_A 4-methylmuconolactone methylisomerase; ferredoxin, ferredoxin-like fold, beta-barrel, biodegradation, ortho- cleavage; HET: 3ML; 1.40A {Pseudomonas reinekei} SCOP: d.58.4.19 PDB: 3hds_A* 3hfk_A* 2ifx_A*
Probab=95.06 E-value=0.13 Score=41.22 Aligned_cols=91 Identities=12% Similarity=0.008 Sum_probs=68.8
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeec---cC----CC-CC-CCceEEEEEEeCCHHHHHhhc
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGS---NF----NL-SS-EIYTHAVVIRLRSVEAFEMFV 258 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~---N~----Sp-~~-kGythafv~~F~s~eald~Y~ 258 (293)
||+.+.+++=|++.|.|+-.+=...=..|..++|| +.....-. .. .+ .. ..|+-...+-|+|.+|+++..
T Consensus 10 MiKli~ll~Rk~gmS~EeF~~~w~~Hapla~~lpG-l~~Y~q~~v~~~~~~~~~~~~~~~~~DgiaElwF~d~ea~~aa~ 88 (116)
T 3hf5_A 10 MIRILYLLVKPESMSHEQFRKECVVHFQMSAGMPG-LHKYEVRLVAGNPTDTHVPYLDVGRIDAIGECWFASEEQYQVYM 88 (116)
T ss_dssp SEEEEEEEECCTTSCHHHHHHHHHHHHHHTTTCTT-CSEEEEEEEEECCCCCSSCBCCCCCCCEEEEEEESSHHHHHHHH
T ss_pred eEEEEEEEecCCCcCHHHHHHHHHHHHHHHHhCcC-CccEEEEEEecCCCCCCCCcCCCCCcCEEEEEEECCHHHHHHHh
Confidence 89999999999999998887654366777788999 66554432 00 11 11 288989999999999999999
Q ss_pred CChhHHHHHHhhhhccccceeE
Q 022676 259 GSSDYKEMWSNKFQPIIRTQLP 280 (293)
Q Consensus 259 ~hp~H~~~~~~~v~p~~e~i~v 280 (293)
.+|+.+++ .+-...++..+..
T Consensus 89 ~sp~~~a~-~~d~~~F~~~i~~ 109 (116)
T 3hf5_A 89 ESDIRKAW-FEHGKYFIGQLKP 109 (116)
T ss_dssp HCHHHHHH-HHHHHHHCSEEEE
T ss_pred CCHHHHHH-HhhHHHhhhhhhh
Confidence 99999874 4567777776643
No 66
>1tz0_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, HYP protein, PSI; 1.84A {Bacillus cereus atcc 14579} SCOP: d.58.4.5
Probab=94.97 E-value=0.042 Score=43.42 Aligned_cols=78 Identities=9% Similarity=-0.023 Sum_probs=59.3
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
.||.=|..++++++..+ +..+..... .+....||-+.+++-+.... .+.-.+.++++++|.|+++++..+|+|++..
T Consensus 6 ~Mi~vi~~~~V~~g~~~-~fe~~~~~~-~~l~~~pGFi~~~llr~~~~-~~~~~y~~~~~W~s~eaf~aw~~S~~f~~~~ 82 (114)
T 1tz0_A 6 YMFIETKTFTVKEGTSN-IVVERFTGE-GIIEKFEGFIDLSVLVKKVR-RGDEEVVVMIRWESEEAWKNWETSEEHLAGH 82 (114)
T ss_dssp CCEEEEEEEEECTTCHH-HHHHHTCSC-CSGGGBTTEEEEEEEECCCS-SSSEEEEEEEEESCHHHHHHHHTCSCCCGGG
T ss_pred ceEEEEEEEEECCCcHH-HHHHHHhcc-chhhcCCCeeEEEEEEcCCC-CCCcEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 38888888888877544 444444444 66777999999998887652 1345789999999999999999999998744
Q ss_pred H
Q 022676 152 K 152 (293)
Q Consensus 152 ~ 152 (293)
+
T Consensus 83 ~ 83 (114)
T 1tz0_A 83 R 83 (114)
T ss_dssp S
T ss_pred H
Confidence 3
No 67
>3hx9_A Protein RV3592; DI-heme, beta barrel, dimer, oxidoreductase; HET: HEM; 1.75A {Mycobacterium tuberculosis}
Probab=94.96 E-value=0.055 Score=43.80 Aligned_cols=72 Identities=13% Similarity=0.072 Sum_probs=52.1
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchH
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYS 148 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~ 148 (293)
||.=|.-|++|++- .++..+....+.....+.||-+.+++-+.... .-.+.++.+++|+|+++++...|+..
T Consensus 2 mivvi~~~~V~pg~-~~efe~~~~~~~~~~~~~pGfl~~~L~r~~~~---p~~yv~~~~WeS~ea~~aw~~S~fr~ 73 (124)
T 3hx9_A 2 PVVKINAIEVPAGA-GPELEKRFAHRAHAVENSPGFLGFQLLRPVKG---EERYFVVTHWESDEAFQAWANGPAIA 73 (124)
T ss_dssp CEEEEEEECCCTTC-HHHHHHHHHHTTTTTTTCTTEEEEEEEEEEES---CCSEEEEEEESCHHHHHHHHHTHHHH
T ss_pred EEEEEEEEEECCCC-HHHHHHHHHHHHHHHhcCCCceEEEEEeCCCC---CCEEEEEEEECCHHHHHHHHhChHHH
Confidence 45556667776654 34455555555555667899999999886642 34578999999999999999999433
No 68
>4dn9_A Antibiotic biosynthesis monooxygenase; structural genomics,protein structure initiative, NEW YORK S genomix research consortium, nysgrc; 2.05A {Chloroflexus aurantiacus}
Probab=94.77 E-value=0.29 Score=39.04 Aligned_cols=85 Identities=7% Similarity=-0.030 Sum_probs=64.6
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.=|+.++.|++. .+++.+.|.....+-|| .+++.+..+.. ..-+..++-+++|.+++++....|..++ +
T Consensus 23 Mi~via~~~vkpg~----~~ef~~~l~~~~r~EpG-cl~y~l~~~~~---dp~~f~~~E~W~d~ea~~aH~~s~~f~~-~ 93 (122)
T 4dn9_A 23 MYGLIGKMRATPGQ----RDALIAILVEGASSMPG-CLSYVVAQDPK---DPDAIWITEVWDSPESHKASLSLPSVQD-A 93 (122)
T ss_dssp CEEEEEEEEESTTC----HHHHHHHHHHHTTTCTT-EEEEEEEEETT---EEEEEEEEEEESCHHHHHHGGGSHHHHH-H
T ss_pred cEEEEEEEEECCCC----HHHHHHHHHHHHhCCCC-CEEEEEEecCC---CCCEEEEEEEECCHHHHHHHHcCHHHHH-H
Confidence 77778888888754 44555555555556799 99999988753 3346789999999999999999996655 6
Q ss_pred HhhhhccccceeEE
Q 022676 268 SNKFQPIIRTQLPV 281 (293)
Q Consensus 268 ~~~v~p~~e~i~vv 281 (293)
.+.+.++++..-.+
T Consensus 94 ~~~~~~ll~~~p~i 107 (122)
T 4dn9_A 94 IACGRPLIAALDEH 107 (122)
T ss_dssp HHHHGGGEEEEEEE
T ss_pred HHHHHHHhcCCCee
Confidence 77999999876544
No 69
>2zdo_A Heme-degrading monooxygenase ISDG; ruffling, protein-substrate complex, cytoplasm, iron, metal-binding, oxidoreductase; HET: HEM; 1.80A {Staphylococcus aureus} PDB: 1xbw_A
Probab=94.67 E-value=0.13 Score=39.62 Aligned_cols=78 Identities=6% Similarity=0.014 Sum_probs=55.8
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
+||.-|..++.+++.. ++..+....+ ..-.+.|| .++++.-.+....+ +-.+.++..++|.++++++..+|.|++.
T Consensus 3 mMi~vi~~~~v~pg~~-~~f~~~~~~~-~~~~~~pG-~i~~~l~r~~~~~~-~~~~~~~~~W~s~ea~~a~~~s~~f~~~ 78 (109)
T 2zdo_A 3 MKFMAEARLTLTKGTA-KDIIERFYTR-HGIETLEG-FDGMFVTQTLEQED-FDEVKILTVWKSKQAFTDWLKSDVFKAA 78 (109)
T ss_dssp CCEEEEEEEEEETTCH-HHHHHHTTSC-CSGGGCTT-EEEEEEEEETTCSS-EEEEEEEEEESCHHHHHHHHTSHHHHHH
T ss_pred EEEEEEEEEEeCCCCH-HHHHHHHhcc-cccccCCC-eEEEEEEecCCCCC-ceEEEEEEEECCHHHHHHHHcCHHHHHH
Confidence 5777788888887553 3333443333 44456799 98888877654321 2378899999999999999999998886
Q ss_pred HH
Q 022676 267 WS 268 (293)
Q Consensus 267 ~~ 268 (293)
.+
T Consensus 79 ~~ 80 (109)
T 2zdo_A 79 HK 80 (109)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 70
>3fj2_A Monooxygenase-like protein; structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS unknown function; HET: MSE; 1.85A {Listeria innocua} PDB: 3fez_A*
Probab=94.62 E-value=0.37 Score=41.80 Aligned_cols=108 Identities=9% Similarity=0.043 Sum_probs=71.9
Q ss_pred hhhhhhhccCCceeEEEEeecccccc---------ccc-----------ccCCCcEEEEEEEEecCCCCHHHHHHHHHHH
Q 022676 39 EAMSMRLSRERTVGTTVLASKEQSSS---------YNS-----------EKKRKVVEHICLLKAKKDLSEEEEKDMLDYL 98 (293)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-----------~~~~~mI~HIVlfK~K~~~s~e~~~~~~~~L 98 (293)
.++++++-..+.+.+++....+.+-= +.+ .....++.-+.-++++++. +++.++.....
T Consensus 31 ~~L~~I~~~~~dr~l~l~~~~~~~~L~~et~~~svF~~p~~YeVL~s~G~l~~~gfvv~n~~~V~~g~-~~~Fe~~f~~~ 109 (186)
T 3fj2_A 31 HYLRQLMENYIGENVTLLQNFSQSLLYQESTGEKLFQEGKEYRVLQSSGSLKGFGIVVFEYIQLRDEE-IPIFLQMYQHA 109 (186)
T ss_dssp HHHHHHHHHTCSSSEEEEECSSCEEEEEEEESCCTTCCSEEEEEEEEEECCCSCSEEEEEEEECCGGG-HHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCceEEEEcCCccEEEEcCCCCcccCCCceEEEeeccCCcCCCCEEEEEEEEcCccc-HHHHHHHHHHh
Confidence 45666666667777766655443210 000 0122345555566665554 44455555555
Q ss_pred HhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHH
Q 022676 99 YTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVL 151 (293)
Q Consensus 99 ~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv 151 (293)
......+||-+++++-+... .-++.+++..+|+||++++...|+|++.-
T Consensus 110 ~~~l~~~pGFis~eLLr~~~----~~~yv~lT~WeseeaF~aW~~S~afr~ah 158 (186)
T 3fj2_A 110 SLHFSETPGLQSTKLTKAMN----TNQFLIVSFWDSEVFFQEWKKTPLHKEIT 158 (186)
T ss_dssp HTTGGGSTTEEEEEEEEETT----SSEEEEEEEESSHHHHHHHTTSHHHHHHH
T ss_pred HHhhhcCCCceEEEEEecCC----CCEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 55556799999999888654 46788999999999999999999999866
No 71
>2go8_A Hypothetical protein YQJZ; SR435, protein structure, structural genomics, PSI, protein initiative, northeast structural genomics consortium; 2.30A {Bacillus subtilis} SCOP: d.58.4.5
Probab=94.05 E-value=0.13 Score=41.82 Aligned_cols=73 Identities=12% Similarity=0.140 Sum_probs=48.6
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHHh
Q 022676 191 FVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSN 269 (293)
Q Consensus 191 HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~~ 269 (293)
-.|.|++......+...++.+.+..|..+.|| -++++.-.|. .| -..-+..++|.+|+++...+|+|+++.+.
T Consensus 14 ~aViFe~~~~~~~~~Y~~la~~~~~la~~qpG-FI~~Es~~~~----dg-~~is~SyW~deeai~aW~~~~eHr~Aq~~ 86 (122)
T 2go8_A 14 YAVIFSSVKSENDTGYGETAERMVSLAADQPG-FLGVESVREA----DG-RGITVSYWDSMDAINHWRHHTEHQAAKEK 86 (122)
T ss_dssp EEEEEEEECC------CHHHHHHHHHHHHSTT-EEEEEEEECT----TS-EEEEEEEESCHHHHHHHHHHC--------
T ss_pred EEEEEEEEeCCchhHHHHHHHHHHHHHhhCCC-ceEEEEEEcC----CC-CEEEEEEeCCHHHHHHHHhCHHHHHHHHh
Confidence 36788888865566677889999999999999 8888843332 25 56778899999999999999999986654
No 72
>2ftr_A BH0200; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.40A {Bacillus halodurans} SCOP: d.58.4.15
Probab=93.84 E-value=0.24 Score=38.75 Aligned_cols=87 Identities=8% Similarity=0.076 Sum_probs=61.3
Q ss_pred cceeEEEEEEecCCCCCChHHHH-HHHHHHhhhhcCcceeeEEeec--cCCCCCCCceEEEEEEeCCHHHHHhhcCChhH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDA-LESLKRLTAEFPSLIVQSTQGS--NFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDY 263 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l-~~~l~~Lk~~iPg~I~~~t~G~--N~Sp~~kGythafv~~F~s~eald~Y~~hp~H 263 (293)
.||+.+|+++=+++ .++-++= .+.-.-|..++|| ++.++... ......-+|.-...+.|+|.+++++....|+-
T Consensus 7 ~Mik~~vly~~~~~--~e~F~~yy~~~H~PL~~~~pg-l~~y~~~~~~~~~~~~~~yd~iael~fds~ea~~aa~~s~e~ 83 (108)
T 2ftr_A 7 MMVKLIALYEQPED--KQAFDEHYFNTHAPLTRKIPG-LRDMKVTRIVGSPMGESKFYLMCEMYYDDHESLQQAMRTDEG 83 (108)
T ss_dssp EEEEEEEEEECCSC--HHHHHHHHHHTHHHHHTTSTT-CCEEEEEEEEEBTTBCCSEEEEEEEEESSHHHHHHHHHSHHH
T ss_pred ceEEEEEEEeCCCC--HHHHHHHHHHhhHHHHhhCCC-ceEEEEEeccCCCCCCCCeeEEEEEEECCHHHHHHHHcCHhH
Confidence 69999999986654 3444333 4556678888999 88766543 22123458999999999999999999999977
Q ss_pred HHHHHhhhhccccc
Q 022676 264 KEMWSNKFQPIIRT 277 (293)
Q Consensus 264 ~~~~~~~v~p~~e~ 277 (293)
+++. +-+.-+++.
T Consensus 84 ~~~~-~D~~~F~d~ 96 (108)
T 2ftr_A 84 KASG-KDAMKFAGK 96 (108)
T ss_dssp HHHH-HHHHHHTGG
T ss_pred HHHH-HHHHHhcCC
Confidence 6644 445455543
No 73
>3fj2_A Monooxygenase-like protein; structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS unknown function; HET: MSE; 1.85A {Listeria innocua} PDB: 3fez_A*
Probab=93.63 E-value=0.63 Score=40.29 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=81.9
Q ss_pred EEEEEEECCHHHHHhhc-cCcchHHHHHHhhccceeeeeeeeeecccCCCccccccCC----------CCcccceeEEEE
Q 022676 126 HGVFMRFQRKEHLVKFY-ENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKG----------EDFNFGVEFVLL 194 (293)
Q Consensus 126 haL~s~F~s~edL~~Y~-~HP~H~~vv~~~i~p~~e~~~vvDye~~v~~~~~~~~~~g----------~~~~~~i~HIVl 194 (293)
.=++++|=|..=|+.-. .||.+.-+ ++...++.+.+|...+ .++|.-+ +-=+.|+.-+..
T Consensus 21 ~kiy~T~Gt~~~L~~I~~~~~dr~l~----l~~~~~~~~L~~et~~-----~svF~~p~~YeVL~s~G~l~~~gfvv~n~ 91 (186)
T 3fj2_A 21 KKVFITTGTEHYLRQLMENYIGENVT----LLQNFSQSLLYQESTG-----EKLFQEGKEYRVLQSSGSLKGFGIVVFEY 91 (186)
T ss_dssp EEEEEEEECHHHHHHHHHHTCSSSEE----EEECSSCEEEEEEEES-----CCTTCCSEEEEEEEEEECCCSCSEEEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHCCCCceE----EEEcCCccEEEEcCCC-----CcccCCCceEEEeeccCCcCCCCEEEEEE
Confidence 34788999999888875 88888732 2233455566666432 3444433 222236555555
Q ss_pred EEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 195 ISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 195 ~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
++.+++. .++.++........-+..|| .++++.=.... .=++.+++.++|++|++++..+++|+++.
T Consensus 92 ~~V~~g~-~~~Fe~~f~~~~~~l~~~pG-Fis~eLLr~~~----~~~yv~lT~WeseeaF~aW~~S~afr~ah 158 (186)
T 3fj2_A 92 IQLRDEE-IPIFLQMYQHASLHFSETPG-LQSTKLTKAMN----TNQFLIVSFWDSEVFFQEWKKTPLHKEIT 158 (186)
T ss_dssp EECCGGG-HHHHHHHHHHHHTTGGGSTT-EEEEEEEEETT----SSEEEEEEEESSHHHHHHHTTSHHHHHHH
T ss_pred EEcCccc-HHHHHHHHHHhHHhhhcCCC-ceEEEEEecCC----CCEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 5555533 23333444444444456799 88888777654 34566999999999999999999998866
No 74
>1sqe_A Hypothetical protein PG130; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Staphylococcus aureus} SCOP: d.58.4.5 PDB: 2zdp_A* 3lgm_A* 3lgn_A* 3qgp_A*
Probab=92.99 E-value=0.15 Score=39.22 Aligned_cols=77 Identities=9% Similarity=0.030 Sum_probs=53.3
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHH
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMW 267 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~ 267 (293)
||.=|..|+.+++.. ++..+.+..+ ..-...|| .++++.-.+..... .-++.++.+++|.++++++..+|.|++..
T Consensus 2 Mi~vi~~~~v~pg~~-~~f~~~~~~~-~~~~~~pG-~l~~~l~r~~~~~~-~~~~~~~~~W~s~ea~~a~~~s~~f~~~~ 77 (109)
T 1sqe_A 2 MFMAENRLQLQKGSA-EETIERFYNR-QGIETIEG-FQQMFVTKTLNTED-TDEVKILTIWESEDSFNNWLNSDVFKEAH 77 (109)
T ss_dssp CEEEEEEEEECTTCH-HHHGGGGGCC-TTGGGSTT-EEEEEEEEETTCSS-SEEEEEEEEESCHHHHHHHHTSHHHHHCC
T ss_pred EEEEEEEEEECCCcH-HHHHHHHhcc-cccccCCC-eEEEEEEEcCCCCC-CcEEEEEEEECCHHHHHHHHcCHHHHHHH
Confidence 666677788777543 3333333333 44456799 99998887764311 14688999999999999999999887744
Q ss_pred H
Q 022676 268 S 268 (293)
Q Consensus 268 ~ 268 (293)
+
T Consensus 78 ~ 78 (109)
T 1sqe_A 78 K 78 (109)
T ss_dssp -
T ss_pred h
Confidence 4
No 75
>3hx9_A Protein RV3592; DI-heme, beta barrel, dimer, oxidoreductase; HET: HEM; 1.75A {Mycobacterium tuberculosis}
Probab=92.82 E-value=0.24 Score=39.99 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=57.5
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
+||.=|..|+.+++.. ++.++....+.....+.|| .++++.-.+.... =.+.++.+++|.++++++..+| .+++
T Consensus 1 Mmivvi~~~~V~pg~~-~efe~~~~~~~~~~~~~pG-fl~~~L~r~~~~p---~~yv~~~~WeS~ea~~aw~~S~-fr~a 74 (124)
T 3hx9_A 1 MPVVKINAIEVPAGAG-PELEKRFAHRAHAVENSPG-FLGFQLLRPVKGE---ERYFVVTHWESDEAFQAWANGP-AIAA 74 (124)
T ss_dssp -CEEEEEEECCCTTCH-HHHHHHHHHTTTTTTTCTT-EEEEEEEEEEESC---CSEEEEEEESCHHHHHHHHHTH-HHHT
T ss_pred CEEEEEEEEEECCCCH-HHHHHHHHHHHHHHhcCCC-ceEEEEEeCCCCC---CEEEEEEEECCHHHHHHHHhCh-HHHH
Confidence 3555556666665432 3333333333344445699 9999887765321 2367999999999999999999 5554
Q ss_pred HHh-hhhccccceeEEeeEe
Q 022676 267 WSN-KFQPIIRTQLPVHFSV 285 (293)
Q Consensus 267 ~~~-~v~p~~e~i~vvDy~v 285 (293)
... ..+|+....-.+-|++
T Consensus 75 h~~~~~~~~~~g~p~~efev 94 (124)
T 3hx9_A 75 HAGHRANPVATGASLLEFEV 94 (124)
T ss_dssp TTTCCCCCCCCCEEEEEEEE
T ss_pred hhcccCCCcccCCCceeEEE
Confidence 442 3567755544444554
No 76
>3fgv_A Uncharacterized protein with ferredoxin-like fold; phosphoserine aminotransferase SERC, structural genomics; HET: MSE; 1.30A {Silicibacter pomeroyi dss-3}
Probab=92.73 E-value=0.38 Score=37.75 Aligned_cols=82 Identities=11% Similarity=0.100 Sum_probs=55.1
Q ss_pred EEEEEe--cCCCCHHHHHHHHHHHHhhhhcCCceEE--EEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHH
Q 022676 77 ICLLKA--KKDLSEEEEKDMLDYLYTSQYQMGGIVA--ISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLK 152 (293)
Q Consensus 77 IVlfK~--K~~~s~e~~~~~~~~L~~L~~~IPgv~~--i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~ 152 (293)
+|..++ |++- .++..+++..+.....+-||=+. +.+..+... ...| .+++|.|||++|..-|.-+++..
T Consensus 16 ~Via~l~~kp~~-~~~~~~~~~~lv~~tr~e~Gci~~~y~L~qd~~~-p~~f-----E~W~s~eal~~h~~~~~~~~~~~ 88 (106)
T 3fgv_A 16 VVIVKSTPQRGK-FNAFAELVGKLVSETRDFPGCLGAYLMLAPERNE-QVVM-----HIWETPDALEAYLTWRADRGDFL 88 (106)
T ss_dssp EEEEEECBCTTC-HHHHHHHHHHHHHHHHTSTTEEEEEEEEEGGGTE-EEEE-----EEESSHHHHHHHHHHHTTCHHHH
T ss_pred EEEEEEEECCCC-HHHHHHHHHHHHHHHhCCCCCCcceEEEecCCCC-CCEE-----EEECCHHHHHHHHcCHHHHHHHH
Confidence 355565 4443 33445555555555556899999 777765432 1212 99999999999999999999887
Q ss_pred Hhhccceeeeeeee
Q 022676 153 EHVMPYCHGLMNVD 166 (293)
Q Consensus 153 ~~i~p~~e~~~vvD 166 (293)
++ .+++++-..|.
T Consensus 89 ~l-~~lla~~p~I~ 101 (106)
T 3fgv_A 89 EI-NEYLEVEQDFK 101 (106)
T ss_dssp HG-GGGBSSCCEEE
T ss_pred HH-HHHhcCCcEEE
Confidence 74 67777655444
No 77
>1lq9_A Actva-ORF6 monooxygenase; aromatic polyketides, actinorhodin, dihydroka streptomyces coelicolor, oxidoreductase; HET: PG4; 1.30A {Streptomyces coelicolor} SCOP: d.58.4.3 PDB: 1n5q_A* 1n5s_A* 1n5t_A* 1n5v_A*
Probab=92.54 E-value=0.26 Score=38.85 Aligned_cols=82 Identities=2% Similarity=-0.005 Sum_probs=59.0
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhh----hhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhh----ccC
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTS----QYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKF----YEN 144 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L----~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y----~~H 144 (293)
-+..|+-|.. +.++..+++.+.+.++ ..+-||-++.++.+... +.+.+++.+++|++++++. ...
T Consensus 9 ~~v~iva~~~---~~pg~~~~~~~~l~~~~~~~~r~epG~i~y~Lh~~~d----~~~~v~~e~W~s~ea~~ah~~~~~~s 81 (112)
T 1lq9_A 9 GFVAVVTFPV---DGPATQHKLVELATGGVQEWIREVPGFLSATYHASTD----GTAVVNYAQWESEQAYRVNFGADPRS 81 (112)
T ss_dssp CEEEEEEEEB---SSHHHHHHHHHHHTTTTTGGGGGSTTEEEEEEEEETT----SSEEEEEEEESCHHHHHHHTTTSHHH
T ss_pred CEEEEEEEEe---cCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEEEcCC----CCeEEEEEEECCHHHHHHHHhcccCC
Confidence 3666666665 2344555555555554 34579999999997653 4566999999999999999 999
Q ss_pred cchHHHHHHhhccceeee
Q 022676 145 PFYSKVLKEHVMPYCHGL 162 (293)
Q Consensus 145 P~H~~vv~~~i~p~~e~~ 162 (293)
|..+++++. +.+.+.+.
T Consensus 82 ~~f~~~~~~-~~~l~~~~ 98 (112)
T 1lq9_A 82 AELREALSS-LPGLMGPP 98 (112)
T ss_dssp HHHHHHHHT-STTBCSCC
T ss_pred HHHHHHHHH-hHHHhcCc
Confidence 999998876 45666555
No 78
>2ril_A Antibiotic biosynthesis monooxygenase; YP_001095275.1, putative monooxygenase, antibiotic biosynthe monooxygenase, structural genomics; HET: MSE; 1.26A {Shewanella loihica}
Probab=91.94 E-value=1.2 Score=33.46 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=51.6
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCC
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGS 260 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~h 260 (293)
-||.-|..|+.|++. .++..+.+..+.....+.|| .++.+.-.+.... ..|...++.+++|.+++++-..|
T Consensus 4 ~mi~~i~~~~v~pg~-~~~f~~~~~~~~~~~~~~pG-~i~~~l~~~~~~~-~~~~~~~~~~W~s~ea~~a~~~~ 74 (99)
T 2ril_A 4 APVTLINPFKVPADK-LEAAIEYWEAHRDFMAQQPG-YLSTQLHQSIDEG-ATYQLINVAIWQSEADFYQAAQK 74 (99)
T ss_dssp CCEEEEEEEBCCTTC-HHHHHHHHHHHHHHHTTSTT-EEEEEEEECSSTT-SSCSEEEEEEESCHHHHHHHHHH
T ss_pred ceEEEEEEEEECCcc-HHHHHHHHHHHHHHHhcCCC-eeeEEEeecCCCC-CeEEEEEEEEECCHHHHHHHHHh
Confidence 478888888888764 34455555555555567899 8888887765432 34678999999999999995554
No 79
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=91.12 E-value=1.3 Score=33.90 Aligned_cols=67 Identities=13% Similarity=0.261 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCC-CccEEEEEEECCHHHHHhhccCcchHHHHHHh
Q 022676 87 SEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVE-NYTHGVFMRFQRKEHLVKFYENPFYSKVLKEH 154 (293)
Q Consensus 87 s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~-gythaL~s~F~s~edL~~Y~~HP~H~~vv~~~ 154 (293)
+.+..++-.+.......+..|-.-+. |......+. .++..++++|.|.++..++..+|+.|+..+-.
T Consensus 15 d~e~y~~Y~~~~~~~l~~~GG~~l~r-g~~~~lEG~~~~~~~viieFps~~aa~a~y~SpeYq~a~~~R 82 (94)
T 3lo3_A 15 DAEKLQQYGARVASTLAKYSGEVLVK-GSVEQLHGKFEHKAQVILEFPSREDAYNWYHSEEYQALISTR 82 (94)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEE-EECEEEESCCCCSEEEEEEESSHHHHHHHHHSHHHHTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEE-cccccccCCCCCCeEEEEECCCHHHHHHHHCCHHHHHHHHHH
Confidence 35555555555555554455544443 322222233 48999999999999999999999999977544
No 80
>3mcs_A Putative monooxygenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.55A {Fusobacterium nucleatum subsp}
Probab=89.72 E-value=3.3 Score=36.39 Aligned_cols=95 Identities=8% Similarity=0.151 Sum_probs=74.3
Q ss_pred CCCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 70 KRKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
...++.=++-++.|++-.++-.+.+.+-....+ +=||.+.+.+.++.. +.-.+.|+=.++|.+++++-...|..++
T Consensus 110 ~~~~~~via~~~vkp~~~e~~~~~~~~~~~~sr-~E~Gcl~y~~~~~~~---~p~~f~~~E~w~d~~A~~aH~~s~Hf~~ 185 (219)
T 3mcs_A 110 NDNTFAVYTVIDVKPENDKEFAEIIKNIVETTF-NEEGTLLVYLGTDRR---NFNKWCLFEVYKDIDSYLNHRSAKYFKD 185 (219)
T ss_dssp CTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHH-HSTTEEEEEEEEETT---EEEEEEEEEEESSHHHHHHHHTSHHHHH
T ss_pred CCCcEEEEEEEEECcCcHHHHHHHHHHHHHHHc-CCCCeEEEEEEecCC---CCCEEEEEEEECCHHHHHHHhcCHHHHH
Confidence 345677788999988766655554444444444 469999999998764 3568999999999999999999999999
Q ss_pred HHHHhhccceeeeeeeeeec
Q 022676 150 VLKEHVMPYCHGLMNVDYET 169 (293)
Q Consensus 150 vv~~~i~p~~e~~~vvDye~ 169 (293)
+++. +.+.+++...++..+
T Consensus 186 ~~~~-~~~~l~~~~~~~l~~ 204 (219)
T 3mcs_A 186 YITQ-TKDMIAGKKRAELQV 204 (219)
T ss_dssp HHHH-HGGGEEEEEEEEEEE
T ss_pred HHHH-HHHHHhCCceeeccc
Confidence 9987 579999888877754
No 81
>3fgv_A Uncharacterized protein with ferredoxin-like fold; phosphoserine aminotransferase SERC, structural genomics; HET: MSE; 1.30A {Silicibacter pomeroyi dss-3}
Probab=88.49 E-value=1.2 Score=34.88 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=48.3
Q ss_pred ChHHHHHHHHHHhh---hhcCcceee--EEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHHhhhhccccce
Q 022676 204 GPAEDALESLKRLT---AEFPSLIVQ--STQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQ 278 (293)
Q Consensus 204 e~i~~l~~~l~~Lk---~~iPg~I~~--~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~~~v~p~~e~i 278 (293)
+.++++++.+.+|. .+-|| .++ +..-.+... -.-| ..++|.+|+++|...|.-+. +.+.+.++++.-
T Consensus 26 ~~~~~~~~~~~~lv~~tr~e~G-ci~~~y~L~qd~~~-----p~~f-E~W~s~eal~~h~~~~~~~~-~~~~l~~lla~~ 97 (106)
T 3fgv_A 26 GKFNAFAELVGKLVSETRDFPG-CLGAYLMLAPERNE-----QVVM-HIWETPDALEAYLTWRADRG-DFLEINEYLEVE 97 (106)
T ss_dssp TCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEGGGTE-----EEEE-EEESSHHHHHHHHHHHTTCH-HHHHGGGGBSSC
T ss_pred CCHHHHHHHHHHHHHHHhCCCC-CCcceEEEecCCCC-----CCEE-EEECCHHHHHHHHcCHHHHH-HHHHHHHHhcCC
Confidence 34455544444444 46799 988 665554322 2233 99999999999998886555 667899999876
Q ss_pred eEEee
Q 022676 279 LPVHF 283 (293)
Q Consensus 279 ~vvDy 283 (293)
..+.+
T Consensus 98 p~I~~ 102 (106)
T 3fgv_A 98 QDFKT 102 (106)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 55543
No 82
>1tz0_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, HYP protein, PSI; 1.84A {Bacillus cereus atcc 14579} SCOP: d.58.4.5
Probab=88.48 E-value=0.58 Score=36.71 Aligned_cols=78 Identities=10% Similarity=-0.000 Sum_probs=54.2
Q ss_pred cceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHH
Q 022676 187 FGVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEM 266 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~ 266 (293)
+||.=|..++.+++.. ++.++..... .+....|| -++++.=.+.... ..=.+.++++++|.++++++..+|+|+++
T Consensus 6 ~Mi~vi~~~~V~~g~~-~~fe~~~~~~-~~l~~~pG-Fi~~~llr~~~~~-~~~~y~~~~~W~s~eaf~aw~~S~~f~~~ 81 (114)
T 1tz0_A 6 YMFIETKTFTVKEGTS-NIVVERFTGE-GIIEKFEG-FIDLSVLVKKVRR-GDEEVVVMIRWESEEAWKNWETSEEHLAG 81 (114)
T ss_dssp CCEEEEEEEEECTTCH-HHHHHHTCSC-CSGGGBTT-EEEEEEEECCCSS-SSEEEEEEEEESCHHHHHHHHTCSCCCGG
T ss_pred ceEEEEEEEEECCCcH-HHHHHHHhcc-chhhcCCC-eeEEEEEEcCCCC-CCcEEEEEEEECCHHHHHHHHcCHHHHHH
Confidence 4766666677776543 3444444444 55667899 8888776665421 12368899999999999999999999875
Q ss_pred HH
Q 022676 267 WS 268 (293)
Q Consensus 267 ~~ 268 (293)
.+
T Consensus 82 ~~ 83 (114)
T 1tz0_A 82 HR 83 (114)
T ss_dssp GS
T ss_pred HH
Confidence 44
No 83
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=87.86 E-value=2.4 Score=35.02 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=58.7
Q ss_pred cCCCcEEEEEEEEecCC---------CCHHHHHHHHHHHHhhhhcCCceEEEEEeecCC---CCCCCccEEEEEEECCHH
Q 022676 69 KKRKVVEHICLLKAKKD---------LSEEEEKDMLDYLYTSQYQMGGIVAISLGRISN---ENVENYTHGVFMRFQRKE 136 (293)
Q Consensus 69 ~~~~mI~HIVlfK~K~~---------~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s---~~~~gythaL~s~F~s~e 136 (293)
.....|.=+=|+|||+. +..+..++=.+....+..+..|=.-+..|.... +....++.+++++|.|.+
T Consensus 20 ~~~~pv~MlNLlrf~~~a~y~dg~~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~~~lEG~~~e~~~~~viieFPS~~ 99 (143)
T 3hhl_A 20 DREGPIHMLNLVRLRPRAAYPDGRETTGAEAYAAYGRDSGPVSERLGGXVVWQGQFELMLIGPQDEHWDHVFIAEYPSVA 99 (143)
T ss_dssp CCSSCEEEEEEEEECSBCCCTTCCCCBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEESCTTCCCSEEEEEEESCHH
T ss_pred CCCCCEEEEehhcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEeecCCceeEECCCCCCCCeEEEEECCCHH
Confidence 34456777778888862 233334444444444444455544444332221 112348999999999999
Q ss_pred HHHhhccCcchHHHHHHhhccceeeeeee
Q 022676 137 HLVKFYENPFYSKVLKEHVMPYCHGLMNV 165 (293)
Q Consensus 137 dL~~Y~~HP~H~~vv~~~i~p~~e~~~vv 165 (293)
+..++..+|+.|++.+-. ...+++...+
T Consensus 100 aa~a~y~SpeYq~a~~~R-~~a~~~~rli 127 (143)
T 3hhl_A 100 AFVEMIRDPVYREAVKHR-QAAVEDSRLI 127 (143)
T ss_dssp HHHHHHHCHHHHHHHHHH-HHHEEEEEEE
T ss_pred HHHHHHcCHHHHHHHHHH-HHhhccceeE
Confidence 999999999999976543 3555543333
No 84
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=87.51 E-value=2.3 Score=35.13 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=38.7
Q ss_pred CceEEEEEEeCCHHHHHhhcCChhHHHHHHhhhhccccceeEEeeEeCCCCC
Q 022676 239 IYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPVHFSVDPVGT 290 (293)
Q Consensus 239 Gythafv~~F~s~eald~Y~~hp~H~~~~~~~v~p~~e~i~vvDy~v~~~g~ 290 (293)
.++..++++|+|.++..++..+|+++++.+ .=...+++...+=....++|.
T Consensus 86 ~~~~~viieFPS~~aa~a~y~SpeYq~a~~-~R~~a~~~~rli~~~~~~~~~ 136 (143)
T 3hhl_A 86 HWDHVFIAEYPSVAAFVEMIRDPVYREAVK-HRQAAVEDSRLIRLXPLKPGX 136 (143)
T ss_dssp CCSEEEEEEESCHHHHHHHHHCHHHHHHHH-HHHHHEEEEEEEEEEECCSCC
T ss_pred CCCeEEEEECCCHHHHHHHHcCHHHHHHHH-HHHHhhccceeEEecCCCCCc
Confidence 489999999999999999999999998643 444556655555555556664
No 85
>1lq9_A Actva-ORF6 monooxygenase; aromatic polyketides, actinorhodin, dihydroka streptomyces coelicolor, oxidoreductase; HET: PG4; 1.30A {Streptomyces coelicolor} SCOP: d.58.4.3 PDB: 1n5q_A* 1n5s_A* 1n5t_A* 1n5v_A*
Probab=86.89 E-value=0.99 Score=35.48 Aligned_cols=83 Identities=11% Similarity=0.056 Sum_probs=56.9
Q ss_pred eeEEEEEEecCCCCCChHHHHHHHHHHhh----hhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhh----cCC
Q 022676 189 VEFVLLISFIQSAFGGPAEDALESLKRLT----AEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMF----VGS 260 (293)
Q Consensus 189 i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk----~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y----~~h 260 (293)
+..|+.+.. +.++..+++.+.+.++. .+-|| .++++.=.+. .|-+..++..++|.+|+++. ..+
T Consensus 10 ~v~iva~~~---~~pg~~~~~~~~l~~~~~~~~r~epG-~i~y~Lh~~~----d~~~~v~~e~W~s~ea~~ah~~~~~~s 81 (112)
T 1lq9_A 10 FVAVVTFPV---DGPATQHKLVELATGGVQEWIREVPG-FLSATYHAST----DGTAVVNYAQWESEQAYRVNFGADPRS 81 (112)
T ss_dssp EEEEEEEEB---SSHHHHHHHHHHHTTTTTGGGGGSTT-EEEEEEEEET----TSSEEEEEEEESCHHHHHHHTTTSHHH
T ss_pred EEEEEEEEe---cCcchHHHHHHHHHHHHHHHhhcCCC-eEEEEEEEcC----CCCeEEEEEEECCHHHHHHHHhcccCC
Confidence 334444444 23445566666666663 35699 8887766553 35566999999999999999 888
Q ss_pred hhHHHHHHhhhhccccceeE
Q 022676 261 SDYKEMWSNKFQPIIRTQLP 280 (293)
Q Consensus 261 p~H~~~~~~~v~p~~e~i~v 280 (293)
|..++ +.+.+.++++...+
T Consensus 82 ~~f~~-~~~~~~~l~~~~~~ 100 (112)
T 1lq9_A 82 AELRE-ALSSLPGLMGPPKA 100 (112)
T ss_dssp HHHHH-HHHTSTTBCSCCEE
T ss_pred HHHHH-HHHHhHHHhcCccc
Confidence 85555 66788888876643
No 86
>3bf4_A Ethyl TERT-butyl ether degradation ETHD protein; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 2.10A {Ralstonia eutropha JMP134}
Probab=86.76 E-value=5 Score=32.44 Aligned_cols=86 Identities=5% Similarity=-0.049 Sum_probs=56.5
Q ss_pred cceeEEEEEEecCCCCCChH-HHHHHHHHHhhhhc--CcceeeEEeeccC--C-C-CCCCceEEEEEEeCCHHHHHhhcC
Q 022676 187 FGVEFVLLISFIQSAFGGPA-EDALESLKRLTAEF--PSLIVQSTQGSNF--N-L-SSEIYTHAVVIRLRSVEAFEMFVG 259 (293)
Q Consensus 187 ~~i~HIVl~kFk~~~s~e~i-~~l~~~l~~Lk~~i--Pg~I~~~t~G~N~--S-p-~~kGythafv~~F~s~eald~Y~~ 259 (293)
-||+-+||++=+++ ++=. +--.+.=.-|..++ |+ ++.++..... . + ...+|.-...+.|+|.|++++-.
T Consensus 19 ~MiKl~VlY~r~~d--~~Fd~dYY~~~H~PLv~~l~gp~-Lr~y~v~~~~~~~~~g~~~~yd~iael~FdS~eal~aA~- 94 (127)
T 3bf4_A 19 GMIKVNVMYPYTEG--ARFDHAYYCDRHMPMVKARLGSA-CAYYTVEKGLAGSASGAPPAFVAMCAFICDSAENFYAAM- 94 (127)
T ss_dssp SCEEEEEEEECCTT--CCBCHHHHHHTHHHHHHHHHGGG-CSEEEEEEEEECSSTTCCCSEEEEEEEEESCHHHHHHHH-
T ss_pred ccEEEEEEEcCCCC--cchhHHHHHhhHHHHHHHhcccc-ceEEEEEccccCCCCCCCCCEEEEEEEEECCHHHHHHHh-
Confidence 49999999998877 2222 32233344455555 77 6776654322 1 2 35689999999999999999988
Q ss_pred ChhHHHHHHhhhhccccc
Q 022676 260 SSDYKEMWSNKFQPIIRT 277 (293)
Q Consensus 260 hp~H~~~~~~~v~p~~e~ 277 (293)
.|+ -+++.+-+.-+++.
T Consensus 95 ~~~-~~~v~aDv~nFtd~ 111 (127)
T 3bf4_A 95 YYH-GAEILGDIANYTDI 111 (127)
T ss_dssp HHH-HHHHHHTGGGTBCC
T ss_pred Ccc-HHHHHhhHHHhCCC
Confidence 454 44455556556554
No 87
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=86.66 E-value=2 Score=32.75 Aligned_cols=71 Identities=11% Similarity=0.124 Sum_probs=44.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCC-CCC-CceEEEEEEeCCHHHHHhhcCChhHHHHHH
Q 022676 192 VLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNL-SSE-IYTHAVVIRLRSVEAFEMFVGSSDYKEMWS 268 (293)
Q Consensus 192 IVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp-~~k-Gythafv~~F~s~eald~Y~~hp~H~~~~~ 268 (293)
|+.++.++ ++..++=.+....+-.+..| .=+..| ..-. ... ..+..++++|+|.++..++..+|+++++..
T Consensus 8 i~~~~v~d---~e~y~~Y~~~~~~~l~~~GG--~~l~rg-~~~~lEG~~~~~~~viieFps~~aa~a~y~SpeYq~a~~ 80 (94)
T 3lo3_A 8 IVGLTPKD---AEKLQQYGARVASTLAKYSG--EVLVKG-SVEQLHGKFEHKAQVILEFPSREDAYNWYHSEEYQALIS 80 (94)
T ss_dssp EEEEEECC---HHHHHHHHHHHHHHHHTTTC--EEEEEE-ECEEEESCCCCSEEEEEEESSHHHHHHHHHSHHHHTTHH
T ss_pred EEEEEECC---HHHHHHHHHHHHHHHHHcCC--EEEEEc-ccccccCCCCCCeEEEEECCCHHHHHHHHCCHHHHHHHH
Confidence 34444443 44444444445555555666 333345 3222 222 378999999999999999999999988544
No 88
>3tvz_A Putative uncharacterized protein YHGC; putative monooxygenase, ABM family, ferredoxin fold, monooxy oxidoreductase; 2.00A {Bacillus subtilis subsp}
Probab=86.53 E-value=1.5 Score=37.07 Aligned_cols=130 Identities=15% Similarity=0.108 Sum_probs=77.5
Q ss_pred EEEEEECCHHHHHhhc-cCcchHHHHHHhhccceeeeeeeeeecccCCCccccccCC----------CCcccceeEEEEE
Q 022676 127 GVFMRFQRKEHLVKFY-ENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKG----------EDFNFGVEFVLLI 195 (293)
Q Consensus 127 aL~s~F~s~edL~~Y~-~HP~H~~vv~~~i~p~~e~~~vvDye~~v~~~~~~~~~~g----------~~~~~~i~HIVl~ 195 (293)
=++++|=|..=|+.-. .||.|.= ++....+..+.+|... -.++|.-+ +.=+.|+.-|..+
T Consensus 8 ~i~~t~Gt~~~L~~i~~~~~~~~l----~l~~~~~~~~l~~~t~-----~~svF~~p~~y~Vl~~~g~~~~~m~~vin~~ 78 (172)
T 3tvz_A 8 KVYITYGTADFLKTIVKKHPSENI----LLMQGQENAILIHETS-----GDTVFQAPHAYEVIDQVGEIKHPGFAVLNNI 78 (172)
T ss_dssp EEEEEEECHHHHHHHHHHCTTSEE----EEEEESSCEEEEEEES-----SCCCSSSCEEEEEEEEESCCSCCSEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHHCCCCce----EEEEcCCceEEEEecC-----CCcccCCCCEEEEEeccCCCCCCcEEEEEEE
Confidence 3778888888888875 8888862 1223455677777442 13444333 2224587777778
Q ss_pred EecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHHhhhh
Q 022676 196 SFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQ 272 (293)
Q Consensus 196 kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~~~v~ 272 (293)
+.+++.. ++.++........-...|| .++++.-..... =++.++++++|.++++++..+|+++++.+ ...
T Consensus 79 ~V~pg~~-~~Fe~~~~~~~~~l~~~pG-fi~~~llr~~~~----~~y~~~t~Wes~eaf~aw~~S~~f~~ah~-~~g 148 (172)
T 3tvz_A 79 AVTQEGR-PLFENKFKNRAGKVENEPG-FEAIRVLRPLDS----DTYVILTLWETERAFQDWQQSDSYKEAHK-KRG 148 (172)
T ss_dssp ECCGGGH-HHHHHHHTSSHHHHTTSTT-EEEEEEEEESSS----SEEEEEEEESCHHHHHHHTCC------------
T ss_pred EcCCCcH-HHHHHHHHHhHHHHhcCCC-ceEEEEEecCCC----CEEEEEEEECCHHHHHHHHcCHHHHHHHH-hcC
Confidence 8776432 2333333333344456899 888887665432 35678999999999999999999988554 454
No 89
>3bf4_A Ethyl TERT-butyl ether degradation ETHD protein; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 2.10A {Ralstonia eutropha JMP134}
Probab=85.15 E-value=1.4 Score=35.71 Aligned_cols=80 Identities=4% Similarity=-0.075 Sum_probs=49.4
Q ss_pred CCCcEEEEEEEEecCCCCHHHH--HHHHHHHHhhhhcC--CceEEEEEeecC--C-C-CCCCccEEEEEEECCHHHHHhh
Q 022676 70 KRKVVEHICLLKAKKDLSEEEE--KDMLDYLYTSQYQM--GGIVAISLGRIS--N-E-NVENYTHGVFMRFQRKEHLVKF 141 (293)
Q Consensus 70 ~~~mI~HIVlfK~K~~~s~e~~--~~~~~~L~~L~~~I--Pgv~~i~~G~~~--s-~-~~~gythaL~s~F~s~edL~~Y 141 (293)
...|++-+||++=+++ ++. +-..+.=..|..++ ||++.+.+.... . + ...+|+-+-.+.|+|.|++++-
T Consensus 17 ~~~MiKl~VlY~r~~d---~~Fd~dYY~~~H~PLv~~l~gp~Lr~y~v~~~~~~~~~g~~~~yd~iael~FdS~eal~aA 93 (127)
T 3bf4_A 17 FQGMIKVNVMYPYTEG---ARFDHAYYCDRHMPMVKARLGSACAYYTVEKGLAGSASGAPPAFVAMCAFICDSAENFYAA 93 (127)
T ss_dssp CCSCEEEEEEEECCTT---CCBCHHHHHHTHHHHHHHHHGGGCSEEEEEEEEECSSTTCCCSEEEEEEEEESCHHHHHHH
T ss_pred cCccEEEEEEEcCCCC---cchhHHHHHhhHHHHHHHhccccceEEEEEccccCCCCCCCCCEEEEEEEEECCHHHHHHH
Confidence 4569999999998776 221 11111111233334 667777664322 1 1 2457999999999999999998
Q ss_pred ccCcchHHHHHH
Q 022676 142 YENPFYSKVLKE 153 (293)
Q Consensus 142 ~~HP~H~~vv~~ 153 (293)
. -|.=+++++.
T Consensus 94 ~-~~~~~~v~aD 104 (127)
T 3bf4_A 94 M-YYHGAEILGD 104 (127)
T ss_dssp H-HHHHHHHHHT
T ss_pred h-CccHHHHHhh
Confidence 7 4544554433
No 90
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=81.55 E-value=1.8 Score=33.37 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=29.6
Q ss_pred EEEEEEeCCHHHHHhhcCChhHHHHHHhhhhccccceeEE
Q 022676 242 HAVVIRLRSVEAFEMFVGSSDYKEMWSNKFQPIIRTQLPV 281 (293)
Q Consensus 242 hafv~~F~s~eald~Y~~hp~H~~~~~~~v~p~~e~i~vv 281 (293)
..++++|+|.++..++..+|+++++..-.-.....+++++
T Consensus 55 ~~viieFpS~~aa~~~~~s~~Yq~a~~~R~~a~~~~~~iv 94 (99)
T 2fiu_A 55 RNVVIEFPSVQHAIDCYNSPEYQAAAKIRQEVADAEMMIV 94 (99)
T ss_dssp EEEEEEESSHHHHHHHHHSHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHcCHHHHHHHHHHHhhhceeEEEE
Confidence 7799999999999999999999986554433333344433
No 91
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=81.43 E-value=6.1 Score=30.26 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHHHhh
Q 022676 87 SEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEHV 155 (293)
Q Consensus 87 s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~~~i 155 (293)
..+..++-.+.......+-.|=.-+..+.........-...++++|.|.++..++..+|+.|+..+-.-
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~~~~~eG~~~~~~viieFpS~~aa~~~~~s~~Yq~a~~~R~ 84 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGSVTELEGTARARNVVIEFPSVQHAIDCYNSPEYQAAAKIRQ 84 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCCEEEEESCCCSEEEEEEESSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCCceEEecCCcCeEEEEECCCHHHHHHHHcCHHHHHHHHHHH
Confidence 455555555555554444555443332211111111222788899999999999999999999776543
No 92
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=81.30 E-value=14 Score=29.20 Aligned_cols=78 Identities=15% Similarity=0.128 Sum_probs=61.7
Q ss_pred eEEEEEEecCCCCCChHHHH-HHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHH
Q 022676 190 EFVLLISFIQSAFGGPAEDA-LESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWS 268 (293)
Q Consensus 190 ~HIVl~kFk~~~s~e~i~~l-~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~ 268 (293)
.-|++|++|++++++.-+.= .+.=-.+..++|+ +.++.+=...+.-+-.|.+.=++.++|.+++..=...|.-+.+.+
T Consensus 3 ~iv~~i~L~~g~d~~aFe~w~~evD~P~~~~Lps-VrsF~V~R~~~~g~~py~yiEvi~v~s~eaf~~~m~S~~~~~~~~ 81 (105)
T 2jdj_A 3 TIIHKIRLFDVAQADAFEFWVQNVDYATCPDLPS-VVRFDVHRASLQANAPYHYVEVIKITDRAAFDADMETSTFAGLVQ 81 (105)
T ss_dssp EEEEEEEESCGGGHHHHHHHHHHTHHHHGGGCTT-EEEEEEEECCCCTTCSCSEEEEEEESCHHHHHHHHTSHHHHHHHH
T ss_pred EEEEEEecCCCCCHHHHHHHHHhchhhhccCCCc-ceeEEEEecccCCCCCeeEEEEEecCCHHHHHHHhcCHHHHHHHH
Confidence 35889999999987666643 4445577888999 999998666554445799999999999999999889998877554
No 93
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=79.63 E-value=15 Score=26.44 Aligned_cols=56 Identities=16% Similarity=0.204 Sum_probs=39.9
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
|+.=+|..++++.. .+++.+.|.+ +|+|.....- ++.||+.+.+...|.++|+.+.
T Consensus 1 mv~A~v~v~~~~~~----~~~~~~~l~~----~peV~e~~~v------tG~~D~ll~v~~~d~~~l~~~i 56 (83)
T 2cvi_A 1 MVTAFILMVTAAGK----EREVMEKLLA----MPEVKEAYVV------YGEYDLIVKVETDTLKDLDQFI 56 (83)
T ss_dssp CEEEEEEEEECTTC----HHHHHHHHHT----STTEEEEEEC------BSSCSEEEEEEESSHHHHHHHH
T ss_pred CEEEEEEEEEcCCC----HHHHHHHHhC----CCCeeEEEEE------cccCCEEEEEEECCHHHHHHHH
Confidence 44556777886543 3455555554 8999877432 4579999999999999998775
No 94
>2zbc_A 83AA long hypothetical transcriptional regulator; SARD; 1.90A {Sulfolobus tokodaii}
Probab=79.56 E-value=10 Score=26.81 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=39.3
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
|+.=+|..+++++. .+++.+.|.+ +|+|.....- ++.||+.+.+...|.++|+.+.
T Consensus 1 mv~a~v~v~~~~~~----~~~~~~~l~~----~peV~~~~~v------tG~~d~l~~v~~~d~~~l~~~~ 56 (83)
T 2zbc_A 1 MASAIVLINTDAGG----EDEVFERLKS----MSEVTEVHVV------YGVYDIVVKVEADSMDKLKDFV 56 (83)
T ss_dssp -CEEEEEEEESTTC----HHHHHHHHTT----CTTEEEEEEC------SSSCSEEEEEECSSHHHHHHHH
T ss_pred CeEEEEEEEEcCCC----HHHHHHHHhC----CCCeEEEEEE------eccCCEEEEEEECCHHHHHHHH
Confidence 45557788886643 2445555544 8999877432 4579999999999999998765
No 95
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=79.46 E-value=8.7 Score=28.20 Aligned_cols=57 Identities=9% Similarity=0.189 Sum_probs=41.3
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhcc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYE 143 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~ 143 (293)
|+.=+|..++++. ..+++.+.+.+ +|+|.+...- ++.||+.+.+...|.++|+.+..
T Consensus 1 mv~A~v~v~~~~~----~~~~~~~~l~~----~peV~~~~~v------tG~~D~ll~v~~~d~~~l~~~l~ 57 (92)
T 2djw_A 1 MITAFVLIRPRGN----RVQALGEAIAE----LPQVAEVYSV------TGPYDLVALVRLKDVEELDDVVT 57 (92)
T ss_dssp CEEEEEEEEECGG----GHHHHHHHHTT----STTEEEEEEE------SSSSSEEEEEEESSGGGHHHHCC
T ss_pred CEEEEEEEEEcCC----CHHHHHHHHhc----CCCeEEEEEe------ecCCCEEEEEEECCHHHHHHHHH
Confidence 5666778888653 24555555544 8999877432 45799999999999999988763
No 96
>4ae5_A Signal transduction protein trap; signaling protein, phosphorylation, RNAIII, quorum SENS biofilm, toxin production; 1.85A {Staphylococcus aureus}
Probab=75.33 E-value=12 Score=31.57 Aligned_cols=45 Identities=16% Similarity=0.298 Sum_probs=35.5
Q ss_pred hhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHH
Q 022676 101 SQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSK 149 (293)
Q Consensus 101 L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~ 149 (293)
..+..||.+.+++=+... +=++.+++..+|+|+.+++...++..+
T Consensus 93 ~l~~~pGF~~f~LLr~~~----~~~y~v~T~Wes~e~Fe~W~~S~aFr~ 137 (167)
T 4ae5_A 93 NFRNFGGFKSYRLLRPAK----GTTYKIYFGFADRHAYEDFKQSDAFND 137 (167)
T ss_dssp GGGGSTTEEEEEEEEESS----SSCEEEEEEESSHHHHHHHHHSHHHHT
T ss_pred cccCCCCcEEEEEeecCC----CCcEEEEEEECCHHHHHHHhcCHHHHH
Confidence 345689999999887542 346788999999999999998876543
No 97
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=66.69 E-value=34 Score=27.70 Aligned_cols=59 Identities=12% Similarity=0.030 Sum_probs=45.1
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
.+.=+|.+++++. ..+..+++.+.+.+ +|+|..... . ++.||+.+.+.+.|.++|+.+.
T Consensus 62 ~~~a~v~v~v~~~-~~~~~~~~~~~l~~----~peV~~~~~---v---tG~~D~~l~v~~~d~~~l~~~l 120 (162)
T 3i4p_A 62 KVTVFVSIRTASH-SIEWLKRFSEVVSE----FPEVVEFYR---M---SGDVDYLLRVVVPDIAAYDAFY 120 (162)
T ss_dssp CEEEEEEEECCSC-CHHHHHHHHHHHHH----CTTEEEEEE---C---CSSCSEEEEEEESSHHHHHHHH
T ss_pred cEEEEEEEEEcCC-ChHHHHHHHHHHhc----CCCEEEeee---c---CCCCCEEEEEEECCHHHHHHHH
Confidence 4677888888654 35567777777776 799987754 1 4579999999999999998764
No 98
>2hiq_A Hypothetical protein YDHR; hypothetical protein JW1657, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.58.4.12 PDB: 1wd6_A
Probab=64.33 E-value=52 Score=26.13 Aligned_cols=73 Identities=15% Similarity=0.087 Sum_probs=54.7
Q ss_pred EEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHHHh
Q 022676 75 EHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEH 154 (293)
Q Consensus 75 ~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~~~ 154 (293)
-=+|=|++.... .++..+..+.|..-..+-||++.=.|..+.. +-+.+=+--|+|+++.++|..-+ .+.++++
T Consensus 11 llqV~F~~~gP~-geE~~~~f~~lA~si~~epGLiwKiWte~e~----t~~aGGiYLFes~~~AeaY~~~h--~arl~~~ 83 (113)
T 2hiq_A 11 LLQLHFAFNGPF-GDAMAEQLKPLAESINQEPGFLWKVWTESEK----NHEAGGIYLFTDEKSALAYLEKH--TARLKNL 83 (113)
T ss_dssp EEEEEEECCCCC-HHHHHHHSHHHHHHHTTSTTEEEEEEEEETT----TTEEEEEEEESSHHHHHHHHHHH--HHHHGGG
T ss_pred eEEEEecCCCch-HHHHHHHHHHHHHHHhcCCCcEEEEEEEcCC----CCeeeEEEEeCCHHHHHHHHHHH--HHHHHHc
Confidence 446778887666 6777777777777777799999877877654 45666677899999999998763 6656654
No 99
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=62.85 E-value=31 Score=27.76 Aligned_cols=58 Identities=7% Similarity=0.013 Sum_probs=43.0
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
.+.=.|.+++++.. +..+++.+.+.+ +|+|.....- ++.||+.+.+...|.++|+.+.
T Consensus 69 ~~~a~v~v~~~~~~--~~~~~~~~~l~~----~peV~~~~~v------tG~~d~~~~v~~~d~~~l~~~l 126 (162)
T 2p5v_A 69 GLQAFIRVSIRKAK--DAREDFAASVRK----WPEVLSCFAL------TGETDYLLQAFFTDMNAFSHFV 126 (162)
T ss_dssp CEEEEEEEEECSST--THHHHHHHHHTT----CTTEEEEEEE------SSSCSEEEEEEESSHHHHHHHH
T ss_pred cEEEEEEEEEcCCc--hHHHHHHHHHhc----ChhhhEeeee------cCCCCEEEEEEECCHHHHHHHH
Confidence 46667788887754 445666666655 7999876541 3479999999999999998764
No 100
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=56.09 E-value=32 Score=26.36 Aligned_cols=43 Identities=7% Similarity=0.118 Sum_probs=37.8
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeec
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRI 116 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~ 116 (293)
.|.+..|...+|+++.+.|-+++..+|..| ...||.+++.|.-
T Consensus 14 ~~~~~~V~V~lKpgVlDPqG~aV~~aL~~L--G~~~V~~VR~GK~ 56 (94)
T 1vq3_A 14 PLFKFAIDVQYRSNVRDPRGETIERVLREE--KGLPVKKLRLGKS 56 (94)
T ss_dssp CEEEEEEEEEECTTSCCHHHHHHHHHHHHT--TCCCEEEEEEEEE
T ss_pred ceEEEEEEEEECCCCcCcHHHHHHHHHHHc--CCCccceeeeeeE
Confidence 478889999999999999999999999887 3789999999963
No 101
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=47.85 E-value=99 Score=24.26 Aligned_cols=57 Identities=11% Similarity=0.030 Sum_probs=41.9
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
.+.-.|.++++++. ..+++.+.+.+ +|+|.+...- ++.||+.+.+...|.++|+.+.
T Consensus 67 ~~~a~v~v~~~~~~---~~~~~~~~l~~----~peV~~~~~v------tG~~d~~~~v~~~d~~~l~~~l 123 (152)
T 2cg4_A 67 DVGCFIGIILKSAK---DYPSALAKLES----LDEVTEAYYT------TGHYSIFIKVMCRSIDALQHVL 123 (152)
T ss_dssp CEEEEEEEEESSGG---GHHHHHHHHHT----CTTEEEEEEE------SSSCSEEEEEEESCHHHHHHHH
T ss_pred eEEEEEEEEECCCC---CHHHHHHHHhC----CcCeEEEEEE------ecccCEEEEEEECCHHHHHHHH
Confidence 57778888886542 34555555554 8999887542 4579999999999999998764
No 102
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=46.26 E-value=1e+02 Score=24.01 Aligned_cols=57 Identities=14% Similarity=-0.009 Sum_probs=41.6
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
..+.-.|.+++++.. .+++.+.+.+ +|+|.....- ++.||+.+.+...|.++++.+.
T Consensus 63 ~~~~a~v~v~~~~~~----~~~~~~~l~~----~p~V~~~~~~------tG~~d~~~~v~~~~~~~l~~~~ 119 (144)
T 2cfx_A 63 LPVSCIVEATVKNAD----YERFKSYIQT----LPNIEFCYRI------AGAACYMLKINAESLEAVEDFI 119 (144)
T ss_dssp CCEEEEEEEEEGGGC----HHHHHHHHHT----CTTEEEEEEE------ESSSSEEEEEEESSHHHHHHHH
T ss_pred ceEEEEEEEEECccc----HHHHHHHHhc----Chhhheeeee------eCCCCEEEEEEECCHHHHHHHH
Confidence 457788888987643 4445555544 8998877532 2469999999999999999874
No 103
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=43.35 E-value=84 Score=25.74 Aligned_cols=57 Identities=21% Similarity=0.217 Sum_probs=41.6
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
..+.=+|.+++.++ ..+++.+.+.+ +|+|.....- ++.||+.+.+...|.++|+.+.
T Consensus 85 ~~~~a~v~v~~~~~----~~~~v~~~l~~----~peV~~~~~v------tG~~d~l~~v~~~d~~~l~~~l 141 (171)
T 2e1c_A 85 YSMLAFILVKVKAG----KYSEVASNLAK----YPEIVEVYET------TGDYDMVVKIRTKNSEELNNFL 141 (171)
T ss_dssp CCEEEEEEEEECTT----CHHHHHHHHHT----STTEEEEEEC------SSSSSEEEEEEESSHHHHHHHH
T ss_pred CCEEEEEEEEECcc----hHHHHHHHHhc----CcCeEEEEEe------eCCCCEEEEEEECCHHHHHHHH
Confidence 34666788898642 34555555555 8999877431 3579999999999999999765
No 104
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=43.20 E-value=93 Score=24.47 Aligned_cols=57 Identities=21% Similarity=0.212 Sum_probs=41.1
Q ss_pred CcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 72 KVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 72 ~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
..+.=.|.+++++ +..+++.+.+.+ +|+|.....- ++.||+.+.+...|.++++.+.
T Consensus 65 ~~~~a~v~v~~~~----~~~~~~~~~l~~----~p~V~~~~~~------tG~~d~~~~v~~~d~~~l~~~~ 121 (151)
T 2cyy_A 65 YSMLAFILVKVKA----GKYSEVASNLAK----YPEIVEVYET------TGDYDMVVKIRTKNSEELNNFL 121 (151)
T ss_dssp CCEEEEEEEEECT----TCHHHHHHHHHT----CTTEEEEEEC------SSSSSEEEEEEESSHHHHHHHH
T ss_pred ccEEEEEEEEECc----ccHHHHHHHHhc----CCCeeEeeEe------cCCCCEEEEEEECCHHHHHHHH
Confidence 3456678888864 234555555555 8999877441 3579999999999999998765
No 105
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=41.55 E-value=1.2e+02 Score=23.58 Aligned_cols=56 Identities=7% Similarity=0.121 Sum_probs=39.9
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEE-CCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRF-QRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F-~s~edL~~Y~ 142 (293)
.+.=.|.+++++ ...+++.+.+.+ +|+|.....- ++.||+.+.+.. .|.++|+.+.
T Consensus 68 ~~~a~v~v~~~~----~~~~~~~~~l~~----~peV~~~~~v------tG~~d~~~~v~~~~d~~~l~~~~ 124 (151)
T 2dbb_A 68 MYAIVLIKSKVP----SDADKVISEISD----IEYVKSVEKG------VGRYNIIVRLLLPKDIKDAENLI 124 (151)
T ss_dssp EEEEEEEEESSH----HHHHHHHHHHTT----CTTEEEEEEE------ESSCSEEEEEEEESSHHHHHHHH
T ss_pred CEEEEEEEEeCC----CCHHHHHHHHHc----CCCeEEEeEe------cCCCCEEEEEEEcCCHHHHHHHH
Confidence 456677777743 444555555554 8999877532 357999999999 9999998764
No 106
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=39.50 E-value=1e+02 Score=23.97 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=40.1
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
.+.=.|.++.+ .+++..+++.+.+.+ +|+|..... .++.||+.+.+...|.++|+.+.
T Consensus 62 ~~~a~v~v~~~--~~~~~~~~~~~~l~~----~p~V~~~~~------~tG~~d~~~~v~~~d~~~l~~~l 119 (150)
T 2pn6_A 62 DYIVITSVKAK--YGKNYHVELGNKLAQ----IPGVWGVYF------VLGDNDFIVMARYKTREEFMEKF 119 (150)
T ss_dssp CEEEEEEEEEC--CCTTHHHHHHHHHHT----STTEEEEEE------CSSSCSEEEEEEESSHHHHHHHT
T ss_pred ceEEEEEEEec--CChhHHHHHHHHHhc----Cchhhhhhh------hcCcCCEEEEEEECCHHHHHHHH
Confidence 35555666643 123456666666665 799977653 13579999999999999998865
No 107
>2hiq_A Hypothetical protein YDHR; hypothetical protein JW1657, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.58.4.12 PDB: 1wd6_A
Probab=37.79 E-value=1.1e+02 Score=24.32 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=40.6
Q ss_pred EEEEecCCCCCChHHHHHHHHHHhhhh---cCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCCh
Q 022676 193 LLISFIQSAFGGPAEDALESLKRLTAE---FPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSS 261 (293)
Q Consensus 193 Vl~kFk~~~s~e~i~~l~~~l~~Lk~~---iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp 261 (293)
|-|+|.... . +++.+.+..|..+ -|| ++.=.|..|- ++=+-|=+=-|+|.++.++|..-+
T Consensus 14 V~F~~~gP~-g---eE~~~~f~~lA~si~~epG-LiwKiWte~e----~t~~aGGiYLFes~~~AeaY~~~h 76 (113)
T 2hiq_A 14 LHFAFNGPF-G---DAMAEQLKPLAESINQEPG-FLWKVWTESE----KNHEAGGIYLFTDEKSALAYLEKH 76 (113)
T ss_dssp EEEECCCCC-H---HHHHHHSHHHHHHHTTSTT-EEEEEEEEET----TTTEEEEEEEESSHHHHHHHHHHH
T ss_pred EEecCCCch-H---HHHHHHHHHHHHHHhcCCC-cEEEEEEEcC----CCCeeeEEEEeCCHHHHHHHHHHH
Confidence 444554443 3 4444555555554 599 7777788875 455677788999999999999754
No 108
>4ae5_A Signal transduction protein trap; signaling protein, phosphorylation, RNAIII, quorum SENS biofilm, toxin production; 1.85A {Staphylococcus aureus}
Probab=37.23 E-value=88 Score=26.15 Aligned_cols=123 Identities=12% Similarity=0.074 Sum_probs=77.1
Q ss_pred EEEEECCHHHHHhhc-cCcchHHHHHHhhccceeeeeeeeeecccCCCccccccCC----------CCcccceeEEEEEE
Q 022676 128 VFMRFQRKEHLVKFY-ENPFYSKVLKEHVMPYCHGLMNVDYETEVEDDILPIFRKG----------EDFNFGVEFVLLIS 196 (293)
Q Consensus 128 L~s~F~s~edL~~Y~-~HP~H~~vv~~~i~p~~e~~~vvDye~~v~~~~~~~~~~g----------~~~~~~i~HIVl~k 196 (293)
++++|=|..=|+.-. .||.|.=+ ++...++.+.+|..-+ .++|.-+ +-=+.| -||+-+
T Consensus 4 iy~T~Gt~~~L~~I~~~~~~r~l~----l~~~~d~s~L~eeT~~-----~sIF~~p~~Y~VL~~~G~l~~~g--fiv~N~ 72 (167)
T 4ae5_A 4 LYTSYGTYGFLHQIKINNPTHQLF----QFSASDTSVIFEETDG-----ETVLKSPSIYEVIKEIGEFSEHH--FYCAIF 72 (167)
T ss_dssp EEEEEECHHHHHHHHHHCTTSCCE----EEECSSSEEEEEEESS-----CCSCSSCEEEEEEEEESCCCTTS--EEEEEE
T ss_pred EEEEcCCHHHHHHHHHHCCCCceE----EEEcCCceEEEEecCC-----CcccCCCcEEEEeeccCCcCCCc--EEEEEE
Confidence 677888888887775 78887631 2344466777777321 2344333 211124 455555
Q ss_pred ecCCCCCChHHHHHHHHHHh---hhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCChhHHHHHH
Q 022676 197 FIQSAFGGPAEDALESLKRL---TAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSSDYKEMWS 268 (293)
Q Consensus 197 Fk~~~s~e~i~~l~~~l~~L---k~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp~H~~~~~ 268 (293)
|+ +.++..+++.+.+.+. .+..|| .+++..=... +|=++.++..++|.++.+++..+++.+++.+
T Consensus 73 ~~--V~~g~~~~fE~rf~~r~~~l~~~pG-F~~f~LLr~~----~~~~y~v~T~Wes~e~Fe~W~~S~aFr~aH~ 140 (167)
T 4ae5_A 73 IP--STEDHAYQLEKKLISVDDNFRNFGG-FKSYRLLRPA----KGTTYKIYFGFADRHAYEDFKQSDAFNDHFS 140 (167)
T ss_dssp EC--CCTTTHHHHHHHHHTSCGGGGGSTT-EEEEEEEEES----SSSCEEEEEEESSHHHHHHHHHSHHHHTTTS
T ss_pred EE--cCCChHHHHHHHHHhhhccccCCCC-cEEEEEeecC----CCCcEEEEEEECCHHHHHHHhcCHHHHHHhc
Confidence 53 3344455666666433 355799 8888766543 2335678899999999999999998776544
No 109
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=36.88 E-value=1e+02 Score=25.16 Aligned_cols=57 Identities=18% Similarity=0.204 Sum_probs=40.3
Q ss_pred EEEEEEEecCCC----CHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 75 EHICLLKAKKDL----SEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 75 ~HIVlfK~K~~~----s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
.-+|.+++.+.. +.+..+++.+.+.+ +|+|.... . ++.||+.+.+...|.++|+.+.
T Consensus 77 ~a~v~v~~~~~~~~~f~~~~~~~~~~~l~~----~peV~~~~--v-----tG~~dll~~v~~~d~~~l~~~l 137 (171)
T 2ia0_A 77 LALIVLEVGKPVIEDFLERYISYISSTLSA----LPGVLFVA--K-----SGEDKIIALVGKNNKDELVKFI 137 (171)
T ss_dssp EEEEEEEESCC--CHHHHHHHHHHHHHHHT----STTEEEEE--E-----ETTTEEEEEEEESSTTHHHHHH
T ss_pred eEEEEEEECCccccccchhHHHHHHHHHHC----CCCeEEEE--E-----cCCCCEEEEEEECCHHHHHHHH
Confidence 456777886642 33345566555555 89998875 2 2479999999999999998754
No 110
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=35.09 E-value=1.4e+02 Score=22.78 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=42.4
Q ss_pred CCcEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 71 RKVVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 71 ~~mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
...+.-.|.+++++ +..+++.+.+.+ +|+|..... .++.||+.+.+...|.++|+.+.
T Consensus 61 g~~~~~~v~~~~~~----~~~~~~~~~l~~----~~~v~~~~~------~~G~~d~~~~v~~~d~~~l~~~~ 118 (141)
T 1i1g_A 61 GYSLVTITGVDTKP----EKLFEVAEKLKE----YDFVKELYL------SSGDHMIMAVIWAKDGEDLAEII 118 (141)
T ss_dssp TCCEEEEEEEEECG----GGHHHHHHHHHH----STTEEEECC------CSSSSSEEEEEEESSHHHHHHHH
T ss_pred CccEEEEEEEEECc----hhHHHHHHHHhc----CCCeEEEEE------ecCCCCEEEEEEECCHHHHHHHH
Confidence 34577788888854 345666666655 788877632 24679999999999999998765
No 111
>1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A
Probab=34.04 E-value=1.1e+02 Score=22.34 Aligned_cols=42 Identities=7% Similarity=0.168 Sum_probs=34.0
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeec
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRI 116 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~ 116 (293)
|....|-..+|+++.+.+-+.+..++..| .+.++.+++.|.-
T Consensus 1 ~~~~~V~V~lK~gVlDpqG~av~~al~~L--G~~~v~~VR~gK~ 42 (84)
T 1t4a_A 1 MYKVKVYVSLKESVLDPQGSAVQHALHSM--TYNEVQDVRIGKY 42 (84)
T ss_dssp CEEEEEEEEECTTSCCHHHHHHHHHHHHT--TCTTEEEEEEEEE
T ss_pred CeEEEEEEEECCCCcCcHHHHHHHHHHHc--CCCChhheEEEEE
Confidence 45678888999999888888888877665 3789999999863
No 112
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=33.61 E-value=97 Score=22.75 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=33.9
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeec
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRI 116 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~ 116 (293)
|..+.|-..+|+++.+.+-+++..+|..| + + ++.+++.|.-
T Consensus 2 m~~~~V~V~lK~gVlDpqG~av~~al~~L-G-~-~v~~VR~gK~ 42 (85)
T 1gtd_A 2 KFMVEVRIRLKKGMLNPEAATIERALALL-G-Y-EVEDTDTTDV 42 (85)
T ss_dssp CEEEEEEEEECTTSCCHHHHHHHHHHHHH-T-C-CCEEEEEEEE
T ss_pred CeEEEEEEEECCCCcCcHHHHHHHHHHHc-C-C-ChheEEEEEE
Confidence 45688899999999888888999999665 3 6 9999999864
No 113
>2asy_A Protein YDHR precursor; dimeric APHA+beta barrel, homodimer, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Escherichia coli} SCOP: d.58.4.12
Probab=31.30 E-value=64 Score=26.04 Aligned_cols=73 Identities=15% Similarity=0.079 Sum_probs=50.7
Q ss_pred EEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhccCcchHHHHHHh
Q 022676 75 EHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFYENPFYSKVLKEH 154 (293)
Q Consensus 75 ~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~~HP~H~~vv~~~ 154 (293)
-=+|=|++..+. .++..+..+.|..-..+-||++-=.|..+ .++-+-+=+--|+|+++.++|..-+ .+-++++
T Consensus 26 lLqVdF~~~gP~-geE~~~~f~~lA~si~~epGLIwKiwten----e~~~eAGGIYLFe~~aaAEaYl~~h--~aRl~~~ 98 (123)
T 2asy_A 26 LLQLHFAFNGPF-GDAMAEQLKPLAESINQEPGFLWKVWTES----EKNHEAGGIYLFTDEKSALAYLEKH--TARLKNL 98 (123)
T ss_dssp EEEEEEESSSSC-SHHHHTTHHHHHHHHTCCCCBSCCCCBCB----TTTTEEEEEEEESCHHHHHHHHHHH--HHHHHHH
T ss_pred eEEEeecCCCch-HHHHHHHHHHHHHHHhcCCCcEEEEEEEc----CCCCccceEEEeCCHHHHHHHHHHH--HHHHHHc
Confidence 446778887777 56666666666666667899864434443 3455667778899999999998764 6666665
No 114
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=30.80 E-value=1.4e+02 Score=20.97 Aligned_cols=57 Identities=14% Similarity=0.257 Sum_probs=38.5
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcC
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVG 259 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~ 259 (293)
|+.=+|.++.+++. .+++.+.+. ++|+ |.+... -++.|+.-+.+.++|.++++.+..
T Consensus 1 mv~A~v~v~~~~~~----~~~~~~~l~----~~pe-V~e~~~------vtG~~D~ll~v~~~d~~~l~~~i~ 57 (83)
T 2cvi_A 1 MVTAFILMVTAAGK----EREVMEKLL----AMPE-VKEAYV------VYGEYDLIVKVETDTLKDLDQFIT 57 (83)
T ss_dssp CEEEEEEEEECTTC----HHHHHHHHH----TSTT-EEEEEE------CBSSCSEEEEEEESSHHHHHHHHH
T ss_pred CEEEEEEEEEcCCC----HHHHHHHHh----CCCC-eeEEEE------EcccCCEEEEEEECCHHHHHHHHH
Confidence 44556777876532 344444444 4777 766542 236799999999999999988763
No 115
>2zw2_A Putative uncharacterized protein STS178; purine metabolism, ligase; 1.55A {Sulfolobus tokodaii}
Probab=26.62 E-value=1.3e+02 Score=22.53 Aligned_cols=42 Identities=12% Similarity=0.253 Sum_probs=34.2
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeec
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRI 116 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~ 116 (293)
|..+.|-..+|+++.+.+-+++..++..| .+.+|.+++.|.-
T Consensus 5 m~~~~V~V~lK~gVlDPqG~av~~al~~L--G~~~V~~VR~gK~ 46 (92)
T 2zw2_A 5 LYRVELIITNKEGVRDPEGETIQRYVVSR--FSDKIIETRAGKY 46 (92)
T ss_dssp EEEEEEEEEECTTSCCHHHHHHHHHTHHH--HCTTEEEEEEEEE
T ss_pred cEEEEEEEEECCCCcCcHHHHHHHHHHHc--CCCChhheEEEEE
Confidence 46788999999999888888888877665 3789999999864
No 116
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=25.11 E-value=2.5e+02 Score=22.09 Aligned_cols=58 Identities=17% Similarity=0.299 Sum_probs=39.2
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhc
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFV 258 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~ 258 (293)
.+.=+|.++..++. +..+++.+.+. ++|+ |.+... .+..|++-+.+.++|.++++.+.
T Consensus 69 ~~~a~v~v~~~~~~--~~~~~~~~~l~----~~pe-V~~~~~------vtG~~d~~~~v~~~d~~~l~~~l 126 (162)
T 2p5v_A 69 GLQAFIRVSIRKAK--DAREDFAASVR----KWPE-VLSCFA------LTGETDYLLQAFFTDMNAFSHFV 126 (162)
T ss_dssp CEEEEEEEEECSST--THHHHHHHHHT----TCTT-EEEEEE------ESSSCSEEEEEEESSHHHHHHHH
T ss_pred cEEEEEEEEEcCCc--hHHHHHHHHHh----cChh-hhEeee------ecCCCCEEEEEEECCHHHHHHHH
Confidence 34446677777644 44555555444 3777 666543 23569999999999999999875
No 117
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=22.42 E-value=2.7e+02 Score=21.52 Aligned_cols=57 Identities=7% Similarity=0.057 Sum_probs=39.6
Q ss_pred CcEEEEEEEE-ecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEeecCCCCCCCccEEEEEEECCHHHHHhhc
Q 022676 72 KVVEHICLLK-AKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGRISNENVENYTHGVFMRFQRKEHLVKFY 142 (293)
Q Consensus 72 ~mI~HIVlfK-~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~~~s~~~~gythaL~s~F~s~edL~~Y~ 142 (293)
..+.-.|.++ +++... +++.+.+. ++|+|.....- ++.||+.+.+...|.++|+.+.
T Consensus 65 ~~~~a~v~~~~~~~~~~----~~~~~~l~----~~p~V~~~~~~------~G~~d~~~~v~~~~~~~l~~~l 122 (150)
T 2w25_A 65 HLLSAFVAITPLDPSQP----DDAPARLE----HIEEVESCYSV------AGEASYVLLVRVASARALEDLL 122 (150)
T ss_dssp CCEEEEEEEEESCTTSC----CCHHHHHT----TCTTEEEEEEE------SSSCSEEEEEEESSHHHHHHHH
T ss_pred cceEEEEEEEEcCCCCH----HHHHHHHh----cCcCeEEEEEe------ECCCCEEEEEEECCHHHHHHHH
Confidence 3566777788 765433 33444443 48998766432 3579999999999999999876
No 118
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=21.88 E-value=7e+02 Score=26.06 Aligned_cols=61 Identities=8% Similarity=0.068 Sum_probs=43.6
Q ss_pred EEEEEecCCCCHHHHHHHHHHHHhhhh--cCCceEEEEE--eecCCCCCCCccEEEEEEECCHHHH
Q 022676 77 ICLLKAKKDLSEEEEKDMLDYLYTSQY--QMGGIVAISL--GRISNENVENYTHGVFMRFQRKEHL 138 (293)
Q Consensus 77 IVlfK~K~~~s~e~~~~~~~~L~~L~~--~IPgv~~i~~--G~~~s~~~~gythaL~s~F~s~edL 138 (293)
.|..++.++++.++.++..+.+++... +.|+|+++.. |..... .....--+..++.+.++.
T Consensus 573 ~v~v~~p~gtsle~t~~~~~~ie~~l~~~~~p~V~~v~s~~G~~~~~-~~~n~~~i~V~L~~~~~r 637 (1057)
T 4dx5_A 573 MTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAG-RGQNTGIAFVSLKDWADR 637 (1057)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHSTTTEEEEEEEESCSTTC-CCTTEEEEEEEECCGGGS
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHhhcCCCCeEEEEEEecccCCC-CCCceEEEEEEEecHHHc
Confidence 466788899999999999999888777 8999998863 433321 122334456788877765
No 119
>2asy_A Protein YDHR precursor; dimeric APHA+beta barrel, homodimer, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Escherichia coli} SCOP: d.58.4.12
Probab=21.56 E-value=1.6e+02 Score=23.63 Aligned_cols=50 Identities=10% Similarity=0.120 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhhhc---CcceeeEEeeccCCCCCCCceEEEEEEeCCHHHHHhhcCCh
Q 022676 207 EDALESLKRLTAEF---PSLIVQSTQGSNFNLSSEIYTHAVVIRLRSVEAFEMFVGSS 261 (293)
Q Consensus 207 ~~l~~~l~~Lk~~i---Pg~I~~~t~G~N~Sp~~kGythafv~~F~s~eald~Y~~hp 261 (293)
+++.+.+.+|..+| || +..=-|..| .++=+-|=|=-|+|.++.++|..-+
T Consensus 39 eE~~~~f~~lA~si~~epG-LIwKiwten----e~~~eAGGIYLFe~~aaAEaYl~~h 91 (123)
T 2asy_A 39 DAMAEQLKPLAESINQEPG-FLWKVWTES----EKNHEAGGIYLFTDEKSALAYLEKH 91 (123)
T ss_dssp HHHHTTHHHHHHHHTCCCC-BSCCCCBCB----TTTTEEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEEEEc----CCCCccceEEEeCCHHHHHHHHHHH
Confidence 44445555555544 88 444445555 3566778888999999999999765
No 120
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=21.23 E-value=2e+02 Score=21.74 Aligned_cols=42 Identities=10% Similarity=0.076 Sum_probs=34.9
Q ss_pred ceeEEEEEEecCCCCCChHHHHHHHHHHhhhhcCcceeeEEeecc
Q 022676 188 GVEFVLLISFIQSAFGGPAEDALESLKRLTAEFPSLIVQSTQGSN 232 (293)
Q Consensus 188 ~i~HIVl~kFk~~~s~e~i~~l~~~l~~Lk~~iPg~I~~~t~G~N 232 (293)
|.+..|.+.+|+++..-|=+.+..+|..| .+.+ +.++..|.=
T Consensus 15 ~~~~~V~V~lKpgVlDPqG~aV~~aL~~L--G~~~-V~~VR~GK~ 56 (94)
T 1vq3_A 15 LFKFAIDVQYRSNVRDPRGETIERVLREE--KGLP-VKKLRLGKS 56 (94)
T ss_dssp EEEEEEEEEECTTSCCHHHHHHHHHHHHT--TCCC-EEEEEEEEE
T ss_pred eEEEEEEEEECCCCcCcHHHHHHHHHHHc--CCCc-cceeeeeeE
Confidence 66778999999999998888888887776 2678 899998865
No 121
>2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii}
Probab=20.45 E-value=80 Score=23.08 Aligned_cols=41 Identities=12% Similarity=0.166 Sum_probs=31.4
Q ss_pred cEEEEEEEEecCCCCHHHHHHHHHHHHhhhhcCCceEEEEEee
Q 022676 73 VVEHICLLKAKKDLSEEEEKDMLDYLYTSQYQMGGIVAISLGR 115 (293)
Q Consensus 73 mI~HIVlfK~K~~~s~e~~~~~~~~L~~L~~~IPgv~~i~~G~ 115 (293)
|....|-..+|+++.+.+-+++..+|..| .+.++.+++.|.
T Consensus 1 ~~~~~V~V~lK~gvlDpqG~av~~al~~l--G~~~v~~Vr~gk 41 (83)
T 2yx5_A 1 MYKATVIIKLKKGVLNPEGRTIQRALNFL--GFNNVKEVQTYK 41 (83)
T ss_dssp CEEEEEEEEECTTCCCHHHHHHHHHHHHT--TCTTCCCCCCCE
T ss_pred CeEEEEEEEECCCCcCcHHHHHHHHHHHc--CCCChhhEEEEE
Confidence 45678888999999888888898888865 256666666654
Done!