Query 022679
Match_columns 293
No_of_seqs 255 out of 1975
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:21:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022679.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022679hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.9E-71 6.3E-76 480.6 16.8 252 17-277 2-254 (303)
2 PTZ00480 serine/threonine-prot 100.0 5.5E-66 1.2E-70 476.6 27.6 264 14-277 7-270 (320)
3 KOG0374 Serine/threonine speci 100.0 1.7E-66 3.7E-71 481.6 22.8 272 14-285 5-283 (331)
4 KOG0373 Serine/threonine speci 100.0 4.3E-67 9.2E-72 448.5 14.2 258 14-280 2-261 (306)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6E-65 1.3E-69 467.0 26.5 260 18-277 2-261 (293)
6 PTZ00244 serine/threonine-prot 100.0 8E-65 1.7E-69 465.8 26.2 260 18-277 4-263 (294)
7 cd07420 MPP_RdgC Drosophila me 100.0 2.1E-64 4.6E-69 466.7 28.4 256 13-277 2-292 (321)
8 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.9E-63 4.1E-68 455.4 25.8 251 18-277 2-253 (285)
9 PTZ00239 serine/threonine prot 100.0 5.8E-63 1.3E-67 454.9 26.6 251 18-277 3-255 (303)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.3E-62 5E-67 453.6 26.5 264 5-277 2-272 (316)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 3.8E-62 8.3E-67 450.9 27.9 245 18-270 3-254 (305)
12 smart00156 PP2Ac Protein phosp 100.0 9.3E-62 2E-66 442.2 26.5 239 39-277 1-239 (271)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 1.2E-59 2.7E-64 435.8 25.8 257 22-278 2-282 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 8E-59 1.7E-63 435.8 28.4 267 10-277 4-327 (377)
15 KOG0375 Serine-threonine phosp 100.0 6.4E-57 1.4E-61 408.6 12.7 230 38-267 60-296 (517)
16 KOG0371 Serine/threonine prote 100.0 1.4E-55 3.1E-60 385.1 12.6 253 16-277 18-271 (319)
17 KOG0377 Protein serine/threoni 100.0 8.3E-49 1.8E-53 363.1 14.9 264 5-277 108-401 (631)
18 KOG0376 Serine-threonine phosp 100.0 1.4E-39 2.9E-44 307.3 11.6 240 38-278 182-427 (476)
19 cd00144 MPP_PPP_family phospho 100.0 6.4E-34 1.4E-38 251.4 20.1 198 69-277 1-209 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 4.4E-28 9.6E-33 218.1 14.6 122 66-189 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 3.9E-27 8.4E-32 207.1 16.8 174 69-277 1-196 (208)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 3.2E-26 6.9E-31 203.2 17.1 115 69-186 2-143 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.9 2.8E-25 6E-30 198.6 17.4 121 66-189 1-143 (234)
24 PRK00166 apaH diadenosine tetr 99.9 2.2E-25 4.9E-30 203.3 15.2 120 67-190 2-128 (275)
25 PRK11439 pphA serine/threonine 99.9 4.8E-25 1E-29 195.1 14.9 174 66-277 17-205 (218)
26 cd07422 MPP_ApaH Escherichia c 99.9 2.1E-25 4.5E-30 201.6 12.0 119 68-190 1-126 (257)
27 cd07421 MPP_Rhilphs Rhilph pho 99.9 8.5E-25 1.9E-29 198.8 15.9 184 66-277 2-278 (304)
28 PHA02239 putative protein phos 99.9 2.9E-24 6.3E-29 192.0 16.2 170 67-277 2-218 (235)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 7.2E-25 1.6E-29 198.8 12.0 120 67-190 2-128 (279)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 6E-24 1.3E-28 186.5 16.9 185 66-283 1-200 (207)
31 PRK09968 serine/threonine-spec 99.9 5.5E-23 1.2E-27 182.0 12.7 182 66-284 15-213 (218)
32 PF00149 Metallophos: Calcineu 99.5 6.6E-13 1.4E-17 108.1 12.9 158 67-260 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 3.4E-11 7.4E-16 100.3 13.7 129 67-281 1-132 (155)
34 PRK09453 phosphodiesterase; Pr 99.3 5E-11 1.1E-15 102.4 13.4 68 67-138 2-77 (182)
35 PF12850 Metallophos_2: Calcin 99.2 2.5E-10 5.5E-15 94.3 11.7 134 67-277 2-135 (156)
36 TIGR00040 yfcE phosphoesterase 99.2 5.6E-10 1.2E-14 93.6 13.2 62 67-137 2-64 (158)
37 cd07379 MPP_239FB Homo sapiens 99.1 5.5E-10 1.2E-14 91.2 11.3 118 67-265 1-120 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.0 3E-09 6.6E-14 95.1 12.8 156 67-261 2-208 (238)
39 cd00838 MPP_superfamily metall 99.0 9.5E-09 2.1E-13 80.9 11.5 118 69-266 1-120 (131)
40 cd07392 MPP_PAE1087 Pyrobaculu 99.0 1E-08 2.3E-13 87.2 12.2 65 68-138 1-66 (188)
41 cd07388 MPP_Tt1561 Thermus the 98.9 4.5E-08 9.8E-13 87.0 15.3 71 66-137 5-75 (224)
42 cd07403 MPP_TTHA0053 Thermus t 98.8 5.2E-08 1.1E-12 79.3 12.2 107 69-265 1-107 (129)
43 cd07394 MPP_Vps29 Homo sapiens 98.8 7.1E-08 1.5E-12 82.8 13.3 126 67-280 1-135 (178)
44 cd07404 MPP_MS158 Microscilla 98.8 2.9E-08 6.3E-13 83.6 9.0 67 68-137 1-68 (166)
45 cd07400 MPP_YydB Bacillus subt 98.6 9.9E-07 2.2E-11 72.3 12.9 117 68-265 1-129 (144)
46 COG0639 ApaH Diadenosine tetra 98.6 6.2E-08 1.3E-12 78.4 5.1 133 139-272 3-145 (155)
47 PRK05340 UDP-2,3-diacylglucosa 98.6 8.5E-07 1.8E-11 79.5 12.8 175 67-264 2-202 (241)
48 TIGR03729 acc_ester putative p 98.5 7E-07 1.5E-11 79.9 10.8 68 67-137 1-74 (239)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 1.3E-06 2.8E-11 77.9 8.7 176 68-265 1-201 (231)
50 cd07402 MPP_GpdQ Enterobacter 98.4 1.8E-06 4E-11 76.6 9.4 69 67-137 1-83 (240)
51 COG0622 Predicted phosphoester 98.3 4.8E-06 1E-10 71.1 10.4 122 66-266 2-126 (172)
52 cd07396 MPP_Nbla03831 Homo sap 98.3 5.7E-06 1.2E-10 75.3 10.7 73 67-139 2-88 (267)
53 cd07383 MPP_Dcr2 Saccharomyces 98.3 3.1E-05 6.8E-10 67.2 14.0 70 66-135 3-87 (199)
54 PRK11340 phosphodiesterase Yae 98.2 4.6E-06 1E-10 76.2 6.9 70 66-137 50-125 (271)
55 cd07399 MPP_YvnB Bacillus subt 98.1 1.9E-05 4E-10 69.7 10.5 69 67-136 2-81 (214)
56 cd07385 MPP_YkuE_C Bacillus su 98.1 4.3E-06 9.2E-11 73.4 6.3 71 66-138 2-77 (223)
57 PRK11148 cyclic 3',5'-adenosin 98.1 7E-05 1.5E-09 68.4 13.7 70 66-137 15-98 (275)
58 cd07393 MPP_DR1119 Deinococcus 98.1 7.9E-05 1.7E-09 66.5 13.6 31 237-267 181-211 (232)
59 cd07395 MPP_CSTP1 Homo sapiens 98.0 0.00015 3.2E-09 65.6 13.6 71 67-137 6-99 (262)
60 cd07398 MPP_YbbF-LpxH Escheric 98.0 8E-06 1.7E-10 71.4 4.9 29 237-265 177-205 (217)
61 PRK04036 DNA polymerase II sma 98.0 8.9E-05 1.9E-09 73.6 12.4 111 66-184 244-387 (504)
62 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00026 5.5E-09 59.4 11.4 47 91-137 37-89 (156)
63 COG2129 Predicted phosphoester 97.8 0.0011 2.4E-08 58.5 14.9 195 65-282 3-207 (226)
64 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.8 0.0001 2.2E-09 67.2 8.3 69 68-137 1-86 (262)
65 cd07401 MPP_TMEM62_N Homo sapi 97.8 0.00015 3.3E-09 65.7 9.4 37 241-277 190-228 (256)
66 TIGR00619 sbcd exonuclease Sbc 97.7 7.4E-05 1.6E-09 67.7 7.0 71 67-137 2-88 (253)
67 cd07391 MPP_PF1019 Pyrococcus 97.7 0.00012 2.6E-09 62.2 7.2 58 81-138 30-89 (172)
68 COG1409 Icc Predicted phosphoh 97.7 0.00042 9.2E-09 62.6 10.8 73 67-141 2-82 (301)
69 PHA02546 47 endonuclease subun 97.7 0.0001 2.2E-09 69.6 6.9 71 67-137 2-89 (340)
70 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00015 3.1E-09 63.3 6.3 74 67-140 1-92 (223)
71 TIGR00024 SbcD_rel_arch putati 97.5 0.00028 6.1E-09 62.9 7.4 69 66-138 15-103 (225)
72 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00028 6E-09 59.8 6.3 67 68-139 1-84 (168)
73 cd00839 MPP_PAPs purple acid p 97.4 0.00025 5.4E-09 64.9 5.7 72 66-139 5-83 (294)
74 cd07380 MPP_CWF19_N Schizosacc 97.4 0.002 4.4E-08 53.8 10.2 119 69-260 1-121 (150)
75 PRK10966 exonuclease subunit S 97.4 0.00045 9.8E-09 66.8 7.1 70 67-137 2-87 (407)
76 TIGR00583 mre11 DNA repair pro 97.3 0.00079 1.7E-08 65.0 7.6 73 66-138 4-124 (405)
77 COG2908 Uncharacterized protei 97.3 0.00075 1.6E-08 60.1 6.8 173 69-266 1-204 (237)
78 cd07378 MPP_ACP5 Homo sapiens 96.9 0.02 4.3E-07 51.9 13.0 47 238-284 190-236 (277)
79 cd07386 MPP_DNA_pol_II_small_a 96.9 0.0019 4.2E-08 57.8 5.8 68 69-138 2-95 (243)
80 cd08163 MPP_Cdc1 Saccharomyces 96.8 0.027 5.8E-07 51.2 12.5 29 236-266 203-231 (257)
81 cd07384 MPP_Cdc1_like Saccharo 96.6 0.0042 9.1E-08 52.9 5.9 49 90-138 43-101 (171)
82 COG1408 Predicted phosphohydro 96.6 0.0049 1.1E-07 56.9 6.5 72 66-139 45-120 (284)
83 KOG0376 Serine-threonine phosp 96.6 0.00087 1.9E-08 64.9 1.4 114 38-153 14-132 (476)
84 cd08166 MPP_Cdc1_like_1 unchar 96.5 0.0049 1.1E-07 53.7 5.6 46 92-137 42-93 (195)
85 PF08321 PPP5: PPP5 TPR repeat 96.5 0.0079 1.7E-07 46.3 5.8 53 4-64 42-95 (95)
86 PF14582 Metallophos_3: Metall 96.5 0.0091 2E-07 53.0 6.9 74 65-138 5-103 (255)
87 COG4186 Predicted phosphoester 96.4 0.019 4.2E-07 48.0 7.8 68 67-138 5-87 (186)
88 cd00845 MPP_UshA_N_like Escher 96.4 0.0063 1.4E-07 54.5 5.4 66 67-137 2-82 (252)
89 COG1407 Predicted ICC-like pho 96.2 0.02 4.4E-07 51.1 7.6 102 64-188 18-141 (235)
90 cd08164 MPP_Ted1 Saccharomyces 96.0 0.016 3.4E-07 50.5 5.7 66 72-137 23-111 (193)
91 COG0420 SbcD DNA repair exonuc 95.8 0.028 6E-07 53.9 7.1 72 67-138 2-89 (390)
92 cd07410 MPP_CpdB_N Escherichia 95.3 0.024 5.2E-07 51.7 4.8 66 67-137 2-95 (277)
93 PLN02533 probable purple acid 95.1 0.025 5.4E-07 55.2 4.5 72 65-138 139-212 (427)
94 KOG3325 Membrane coat complex 94.3 0.43 9.3E-06 39.8 9.1 116 68-266 3-124 (183)
95 cd07408 MPP_SA0022_N Staphyloc 94.1 0.089 1.9E-06 47.5 5.3 66 67-137 2-82 (257)
96 COG1311 HYS2 Archaeal DNA poly 94.0 0.55 1.2E-05 46.0 10.7 185 67-270 227-438 (481)
97 cd07412 MPP_YhcR_N Bacillus su 93.6 0.085 1.8E-06 48.6 4.2 66 67-137 2-88 (288)
98 PF06874 FBPase_2: Firmicute f 92.7 0.11 2.4E-06 52.2 3.7 43 93-140 185-227 (640)
99 KOG3662 Cell division control 92.5 0.25 5.3E-06 47.7 5.6 56 81-136 81-143 (410)
100 cd07411 MPP_SoxB_N Thermus the 92.3 0.23 4.9E-06 45.0 5.0 64 68-137 3-95 (264)
101 cd00842 MPP_ASMase acid sphing 91.5 0.37 8E-06 44.2 5.6 74 67-140 39-125 (296)
102 PRK09419 bifunctional 2',3'-cy 90.5 0.38 8.1E-06 52.8 5.2 65 67-136 662-735 (1163)
103 cd07409 MPP_CD73_N CD73 ecto-5 89.9 0.7 1.5E-05 42.3 5.8 66 67-137 2-94 (281)
104 KOG2863 RNA lariat debranching 89.5 0.92 2E-05 43.0 6.2 73 66-138 1-89 (456)
105 COG1768 Predicted phosphohydro 89.5 0.81 1.7E-05 39.4 5.3 71 91-171 42-114 (230)
106 cd07406 MPP_CG11883_N Drosophi 89.3 0.76 1.6E-05 41.5 5.4 56 76-136 21-82 (257)
107 PF04042 DNA_pol_E_B: DNA poly 87.5 0.97 2.1E-05 39.2 4.8 72 68-139 1-93 (209)
108 KOG2476 Uncharacterized conser 87.3 1.3 2.9E-05 43.1 5.9 69 65-134 5-75 (528)
109 KOG3339 Predicted glycosyltran 86.9 6.3 0.00014 34.1 9.1 85 94-183 40-140 (211)
110 cd07405 MPP_UshA_N Escherichia 86.3 0.97 2.1E-05 41.5 4.3 66 67-137 2-87 (285)
111 TIGR00282 metallophosphoestera 86.0 1.8 3.9E-05 39.6 5.8 66 67-137 2-71 (266)
112 KOG1432 Predicted DNA repair e 85.4 1.9 4.2E-05 40.6 5.7 49 91-139 99-149 (379)
113 cd07407 MPP_YHR202W_N Saccharo 83.9 1.5 3.2E-05 40.4 4.3 66 67-137 7-97 (282)
114 COG0737 UshA 5'-nucleotidase/2 83.7 1.5 3.2E-05 43.8 4.6 68 66-138 27-116 (517)
115 cd07382 MPP_DR1281 Deinococcus 83.3 3.2 7E-05 37.7 6.2 66 67-137 1-70 (255)
116 COG3855 Fbp Uncharacterized pr 81.7 1 2.2E-05 44.0 2.4 41 94-139 192-232 (648)
117 cd08162 MPP_PhoA_N Synechococc 81.3 2.7 5.8E-05 39.3 5.0 65 68-137 3-91 (313)
118 KOG1378 Purple acid phosphatas 80.3 2 4.4E-05 42.0 3.9 31 240-270 323-353 (452)
119 PRK09420 cpdB bifunctional 2', 80.0 2.6 5.7E-05 43.4 4.9 68 65-137 25-122 (649)
120 TIGR01390 CycNucDiestase 2',3' 79.1 2.8 6.1E-05 43.0 4.7 66 67-137 4-99 (626)
121 PRK09419 bifunctional 2',3'-cy 78.7 2.7 5.9E-05 46.2 4.8 24 238-261 256-280 (1163)
122 PTZ00235 DNA polymerase epsilo 78.3 7.4 0.00016 36.0 6.8 72 66-137 28-122 (291)
123 PTZ00422 glideosome-associated 75.2 5.3 0.00012 38.6 5.1 71 67-137 28-109 (394)
124 PRK09558 ushA bifunctional UDP 74.9 4 8.6E-05 41.1 4.4 66 67-137 36-121 (551)
125 PF14164 YqzH: YqzH-like prote 74.7 12 0.00027 26.5 5.6 47 13-60 1-47 (64)
126 PRK11907 bifunctional 2',3'-cy 72.5 5.9 0.00013 41.9 5.1 67 66-137 116-213 (814)
127 cd07387 MPP_PolD2_C PolD2 (DNA 68.5 15 0.00033 33.4 6.3 94 94-197 44-159 (257)
128 TIGR01530 nadN NAD pyrophospha 66.8 12 0.00026 37.7 5.8 41 92-137 49-94 (550)
129 KOG3947 Phosphoesterases [Gene 65.7 8.6 0.00019 35.3 4.0 66 66-139 62-128 (305)
130 PRK09418 bifunctional 2',3'-cy 59.8 14 0.0003 39.0 4.9 67 65-136 39-141 (780)
131 KOG2310 DNA repair exonuclease 56.8 38 0.00082 34.1 7.0 52 66-117 14-77 (646)
132 COG0634 Hpt Hypoxanthine-guani 54.0 1.4E+02 0.0031 25.6 9.4 79 36-118 9-118 (178)
133 PF12641 Flavodoxin_3: Flavodo 53.2 72 0.0016 26.7 7.4 102 69-189 2-116 (160)
134 PF02875 Mur_ligase_C: Mur lig 52.3 47 0.001 24.4 5.6 72 63-134 9-82 (91)
135 PF06874 FBPase_2: Firmicute f 48.6 18 0.0004 36.9 3.5 40 237-276 507-554 (640)
136 PRK10773 murF UDP-N-acetylmura 37.6 1.3E+02 0.0029 29.2 7.7 67 65-132 324-392 (453)
137 PF15007 CEP44: Centrosomal sp 36.5 21 0.00046 29.1 1.5 85 73-171 1-87 (131)
138 KOG0918 Selenium-binding prote 33.1 2.6 5.5E-05 40.6 -4.9 92 94-191 49-144 (476)
139 PF13258 DUF4049: Domain of un 32.6 1.9E+02 0.0041 26.2 6.9 58 124-188 127-187 (318)
140 cd07381 MPP_CapA CapA and rela 29.0 1.1E+02 0.0023 26.9 4.9 29 245-273 203-231 (239)
141 smart00854 PGA_cap Bacterial c 28.1 1.1E+02 0.0024 26.9 4.9 26 247-272 203-228 (239)
142 PLN00084 photosystem II subuni 26.9 37 0.0008 28.9 1.4 36 99-135 9-51 (214)
143 TIGR00282 metallophosphoestera 26.8 46 0.001 30.4 2.2 36 95-132 2-38 (266)
144 PF09587 PGA_cap: Bacterial ca 26.7 1.3E+02 0.0029 26.6 5.2 32 243-274 210-241 (250)
145 PLN02965 Probable pheophorbida 25.4 1.8E+02 0.0038 25.4 5.7 20 240-259 60-81 (255)
146 COG4320 Uncharacterized protei 24.8 44 0.00095 31.6 1.6 58 55-120 46-107 (410)
147 PF11533 DUF3225: Protein of u 24.2 1.6E+02 0.0035 23.8 4.5 79 207-292 28-123 (125)
148 TIGR01143 murF UDP-N-acetylmur 24.2 3.6E+02 0.0078 25.8 8.0 44 68-111 298-342 (417)
149 TIGR00758 UDG_fam4 uracil-DNA 23.2 4.5E+02 0.0096 22.0 7.7 72 64-137 20-113 (173)
150 cd07382 MPP_DR1281 Deinococcus 23.2 70 0.0015 29.0 2.7 37 95-132 1-37 (255)
151 COG3855 Fbp Uncharacterized pr 22.7 40 0.00087 33.3 1.0 40 237-276 514-561 (648)
152 COG1692 Calcineurin-like phosp 22.0 1.2E+02 0.0027 27.5 3.9 40 238-284 212-251 (266)
153 TIGR03439 methyl_EasF probable 21.6 6.7E+02 0.015 23.5 11.8 138 17-165 90-232 (319)
154 TIGR01143 murF UDP-N-acetylmur 20.8 3.7E+02 0.0081 25.7 7.3 8 67-74 326-333 (417)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-71 Score=480.64 Aligned_cols=252 Identities=48% Similarity=0.912 Sum_probs=240.6
Q ss_pred hHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCee
Q 022679 17 ALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANY 96 (293)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~ 96 (293)
+++..|+++.+.+ .+++.++..||.+++++|.+|+|++.++.|++|+|||||++.||..+|+..|-+|.++|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 5788999999886 78999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh-HHHHHHHhhhhccCCceEEeC
Q 022679 97 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALID 175 (293)
Q Consensus 97 vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~ 175 (293)
+|||||||||.+|+|++.+|+.||++||+++.+||||||.+.+++.|||++||.++|+ ..+|+.+.+.|+.||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEE
Q 022679 176 EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCR 255 (293)
Q Consensus 176 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iir 255 (293)
+++||||||+||++.+++||+.+.|-.++|+.+..+|+|||||.+. .+|.-+|||.|+.||+++++.|++.||+++|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999855 799999999999999999999999999999999
Q ss_pred eccccCCceeeeCCeEEEEEec
Q 022679 256 AHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 256 gH~~~~~G~~~f~~~~~~~~~~ 277 (293)
+||.+.+||+.+.++.+..+||
T Consensus 233 aHQLv~eGyk~~F~~~v~TVWS 254 (303)
T KOG0372|consen 233 AHQLVMEGYKWHFDEKVVTVWS 254 (303)
T ss_pred HHHHHHhhHHHhcCCceEEEec
Confidence 9999999998755554555555
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=5.5e-66 Score=476.64 Aligned_cols=264 Identities=73% Similarity=1.295 Sum_probs=248.9
Q ss_pred ChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCC
Q 022679 14 DPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK 93 (293)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~ 93 (293)
.+..++++|+++++.+...++....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~ 86 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPE 86 (320)
T ss_pred cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCc
Confidence 34458999999998765555666689999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEE
Q 022679 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAAL 173 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~ 173 (293)
++|||||||||||++++|++.+++++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|+.||++|+
T Consensus 87 ~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAi 166 (320)
T PTZ00480 87 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAAL 166 (320)
T ss_pred ceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEE
Q 022679 174 IDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLV 253 (293)
Q Consensus 174 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~i 253 (293)
++++++||||||+|.+.++++++.++||.+.++.++++|++||||.....+|.+++||.+++||++++++||++||+++|
T Consensus 167 I~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~I 246 (320)
T PTZ00480 167 IDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLI 246 (320)
T ss_pred ecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred EEeccccCCceeeeCCeEEEEEec
Q 022679 254 CRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 254 irgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
|||||++++||+++.++.++..+|
T Consensus 247 iR~Hq~v~~G~~~~~~~~~iTvFS 270 (320)
T PTZ00480 247 CRAHQVVEDGYEFFSKRQLVTLFS 270 (320)
T ss_pred EEcCccccCceEEeCCCcEEEEeC
Confidence 999999999999877665555555
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.7e-66 Score=481.58 Aligned_cols=272 Identities=64% Similarity=1.109 Sum_probs=253.0
Q ss_pred ChhhHHHHHHHHHhccccCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcC-C
Q 022679 14 DPNALDDIIHRLTEVRFARP--GKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGG-Y 90 (293)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~-~ 90 (293)
....+++++.+++....... ..+..++++++.+||..+.++|..+|+++++++||.|+|||||++.||.++|+..| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 45567888888887754222 22456999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh-HHHHHHHhhhhccCC
Q 022679 91 PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLP 169 (293)
Q Consensus 91 ~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP 169 (293)
|++++|||||||||||++|+|++.+|+++|++||++++++|||||.+.++..|||++||.++|+ ..+|..|++.|..||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred ceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcC
Q 022679 170 VAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHD 249 (293)
Q Consensus 170 ~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~ 249 (293)
++|+|+++++|+|||++|.+.++++++.|.||.+.++.++++|++||||+....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CcEEEEeccccCCceeeeCCeEEEEEec---cCCcccce
Q 022679 250 LDLVCRAHQVVDFPTLSFSIFFLFFWYR---RAGKNVPL 285 (293)
Q Consensus 250 ~~~iirgH~~~~~G~~~f~~~~~~~~~~---~~g~~~~l 285 (293)
+++||||||++++||++|++++++..+| +-|...+.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~ 283 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNA 283 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCc
Confidence 9999999999999999999997766666 44444443
No 4
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-67 Score=448.53 Aligned_cols=258 Identities=44% Similarity=0.861 Sum_probs=245.8
Q ss_pred ChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCC
Q 022679 14 DPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK 93 (293)
Q Consensus 14 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~ 93 (293)
.+-++++.|+....++ .++++|++.||+-++++|..|.+++.++.|++|+|||||++.||.++|+..|..|+
T Consensus 2 ~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~ 73 (306)
T KOG0373|consen 2 RKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPD 73 (306)
T ss_pred CcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCC
Confidence 3456789999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh-HHHHHHHhhhhccCCceE
Q 022679 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAA 172 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~ 172 (293)
++|||+|||||||.+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||+.+|+ ...|+.+.+.|+.|+++|
T Consensus 74 tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaA 153 (306)
T KOG0373|consen 74 TNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAA 153 (306)
T ss_pred cceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999995 689999999999999999
Q ss_pred EeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcE
Q 022679 173 LIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDL 252 (293)
Q Consensus 173 ~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~ 252 (293)
+|+++++|||||+||++.+++||+.|.|.+++|..+.++|++||||+. .+.|.-++||.|++||++++.+|...|++++
T Consensus 154 iID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~L 232 (306)
T KOG0373|consen 154 IIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNL 232 (306)
T ss_pred HhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHH
Confidence 999999999999999999999999999999999999999999999984 7999999999999999999999999999999
Q ss_pred EEEeccccCCceee-eCCeEEEEEeccCC
Q 022679 253 VCRAHQVVDFPTLS-FSIFFLFFWYRRAG 280 (293)
Q Consensus 253 iirgH~~~~~G~~~-f~~~~~~~~~~~~g 280 (293)
|+|+||.+++||+. |.+|-++.++|.+.
T Consensus 233 icRaHQLV~EG~KymF~eK~lvTVWSAPN 261 (306)
T KOG0373|consen 233 ICRAHQLVQEGFKYMFDEKGLVTVWSAPN 261 (306)
T ss_pred HHhHHHHHHhhHHhccCCCCEEEEecCCc
Confidence 99999999999977 67776766666443
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6e-65 Score=466.97 Aligned_cols=260 Identities=75% Similarity=1.343 Sum_probs=246.4
Q ss_pred HHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeee
Q 022679 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (293)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~v 97 (293)
++++|+++++.+....+....++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 57889999987655566777899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCc
Q 022679 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEK 177 (293)
Q Consensus 98 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 177 (293)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..+||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEec
Q 022679 178 ILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAH 257 (293)
Q Consensus 178 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH 257 (293)
++|||||++|.+.++++++.++||.+.++.+++.|++||||.....+|.+++||.++.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred cccCCceeeeCCeEEEEEec
Q 022679 258 QVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 258 ~~~~~G~~~f~~~~~~~~~~ 277 (293)
|++++||+++.+++++..+|
T Consensus 242 e~~~~G~~~~~~~~~iTvfS 261 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFS 261 (293)
T ss_pred ccccCeEEEeCCCcEEEEec
Confidence 99999999876665555555
No 6
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=8e-65 Score=465.75 Aligned_cols=260 Identities=55% Similarity=1.021 Sum_probs=245.2
Q ss_pred HHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeee
Q 022679 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (293)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~v 97 (293)
++++|+++++.....++....++++++.+||++++++|++||+++++++|++||||||||+.+|.++|+..++++.++|+
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 57888888887655556666799999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCc
Q 022679 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEK 177 (293)
Q Consensus 98 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 177 (293)
|||||||||++|.||+.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|..+.++|+.||++++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~ 163 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEK 163 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEec
Q 022679 178 ILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAH 257 (293)
Q Consensus 178 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH 257 (293)
++|||||++|.+.++++++.++||.+.++.++++|++||||.....+|.+++||.+++||++++++||++||+++|||||
T Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 243 (294)
T PTZ00244 164 IICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAH 243 (294)
T ss_pred eEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcC
Confidence 99999999999999999999999999999999999999999877789999999999999999999999999999999999
Q ss_pred cccCCceeeeCCeEEEEEec
Q 022679 258 QVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 258 ~~~~~G~~~f~~~~~~~~~~ 277 (293)
|++++||+++.++.++..+|
T Consensus 244 q~~~~G~~~~~~~~~iTvfS 263 (294)
T PTZ00244 244 QVMERGYGFFASRQLVTVFS 263 (294)
T ss_pred ccccCceEEcCCCeEEEEeC
Confidence 99999999876665555555
No 7
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.1e-64 Score=466.69 Aligned_cols=256 Identities=32% Similarity=0.564 Sum_probs=229.6
Q ss_pred CChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----ceeEEecCCCCHHHHHHHHHhc
Q 022679 13 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYG 88 (293)
Q Consensus 13 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~----~i~viGDIHG~~~~L~~~l~~~ 88 (293)
++...++++|+++.+.. .++++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..
T Consensus 2 ~~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~ 73 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKN 73 (321)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHc
Confidence 45667899999998765 68999999999999999999999999976 8999999999999999999999
Q ss_pred CCCC-CCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh---HHHHHHHhhh
Q 022679 89 GYPP-KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN---VRLWKAFTDC 164 (293)
Q Consensus 89 ~~~~-~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~---~~~~~~~~~~ 164 (293)
|+++ .++|||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||.+||..+|+ ..+|+.+.++
T Consensus 74 g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~ 153 (321)
T cd07420 74 GLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDV 153 (321)
T ss_pred CCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHH
Confidence 9985 46899999999999999999999999999999999999999999999999999999999996 7899999999
Q ss_pred hccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCC-----CCC----------------------CchhhhhhhCC
Q 022679 165 FNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTA-----VPD----------------------TGLLCDLLWSD 217 (293)
Q Consensus 165 ~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsd 217 (293)
|+.||++|++++++|||||||+| ..+++++++|+|+.. .|. .+++.|+||||
T Consensus 154 F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSD 232 (321)
T cd07420 154 FSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSD 232 (321)
T ss_pred HHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecC
Confidence 99999999999999999999997 568999999987421 111 14678999999
Q ss_pred CCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 218 PGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 218 p~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
|......|.+++||.+++||++++++||++|++++||||||++++||+++.++.++..+|
T Consensus 233 P~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFS 292 (321)
T cd07420 233 PKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFS 292 (321)
T ss_pred CccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEec
Confidence 986655588889999999999999999999999999999999999998766655544444
No 8
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.9e-63 Score=455.41 Aligned_cols=251 Identities=50% Similarity=0.936 Sum_probs=237.1
Q ss_pred HHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeee
Q 022679 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (293)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~v 97 (293)
++++++++.+.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 577888888754 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh-HHHHHHHhhhhccCCceEEeCC
Q 022679 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDE 176 (293)
Q Consensus 98 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~ 176 (293)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|..+.++|+.||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 999999999999999999999999999999999999999999999999999999997 4899999999999999999999
Q ss_pred cEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEe
Q 022679 177 KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRA 256 (293)
Q Consensus 177 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirg 256 (293)
+++||||||+|.+.++++++.++||.+.+..+.+.|++||||... .+|.+++||.++.||++++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred ccccCCceeeeCCeEEEEEec
Q 022679 257 HQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 257 H~~~~~G~~~f~~~~~~~~~~ 277 (293)
||++++||+++.++.++..+|
T Consensus 233 He~~~~G~~~~~~~~~~TvfS 253 (285)
T cd07415 233 HQLVMEGYQWMFDDKLVTVWS 253 (285)
T ss_pred CccccceEEEecCCcEEEEec
Confidence 999999998866655555555
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=5.8e-63 Score=454.88 Aligned_cols=251 Identities=45% Similarity=0.885 Sum_probs=235.8
Q ss_pred HHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeee
Q 022679 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (293)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~v 97 (293)
++++|+.+.+.. .++++++.+||++|+++|++||+++++++|++|+||||||+.+|.++|+..+.++.++|+
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~l 74 (303)
T PTZ00239 3 IDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYI 74 (303)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 678888888754 689999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh-HHHHHHHhhhhccCCceEEeCC
Q 022679 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN-VRLWKAFTDCFNCLPVAALIDE 176 (293)
Q Consensus 98 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~ 176 (293)
|||||||||++|+|++.+++++|+.+|.+++++|||||.+.++..|||.+|+..+|+ ..+|..+.++|+.||+++++++
T Consensus 75 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~ 154 (303)
T PTZ00239 75 FIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEG 154 (303)
T ss_pred EeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcC
Confidence 999999999999999999999999999999999999999999999999999999996 4799999999999999999999
Q ss_pred cEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEe
Q 022679 177 KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRA 256 (293)
Q Consensus 177 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirg 256 (293)
+++|||||++|.+.++++++.+.||.+.|..+.++|++||||.. ..+|.+++||.+++||++++++||++||+++||||
T Consensus 155 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 233 (303)
T PTZ00239 155 QILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRA 233 (303)
T ss_pred eEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Confidence 99999999999999999999999999999999999999999984 47899999999999999999999999999999999
Q ss_pred ccccCCceee-eCCeEEEEEec
Q 022679 257 HQVVDFPTLS-FSIFFLFFWYR 277 (293)
Q Consensus 257 H~~~~~G~~~-f~~~~~~~~~~ 277 (293)
||++++||+. |.++.++..+|
T Consensus 234 He~~~~G~~~~~~~~~~iTvfS 255 (303)
T PTZ00239 234 HQLVMEGYKYWFPDQNLVTVWS 255 (303)
T ss_pred ChhhccceEEEeCCCeEEEEEC
Confidence 9999999986 56664444444
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.3e-62 Score=453.62 Aligned_cols=264 Identities=38% Similarity=0.714 Sum_probs=244.5
Q ss_pred ccCcCCcc-CChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----eeEEecCCCCHH
Q 022679 5 QGQQQGTI-MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAP----MKICGDVHGQYS 79 (293)
Q Consensus 5 ~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~----i~viGDIHG~~~ 79 (293)
+|++.+.. ++...++++++++...+ .++++++.+||++|+++|++||++++++.| ++||||||||+.
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~ 73 (316)
T cd07417 2 DGPRLEDEKVTLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFY 73 (316)
T ss_pred CCcccCCCCCCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHH
Confidence 56777777 89999999999999865 689999999999999999999999999755 999999999999
Q ss_pred HHHHHHHhcCCCCC-CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHH
Q 022679 80 DLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLW 158 (293)
Q Consensus 80 ~L~~~l~~~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~ 158 (293)
+|.++|+..++++. ++|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..|+..+|+..+|
T Consensus 74 dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~ 153 (316)
T cd07417 74 DLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMF 153 (316)
T ss_pred HHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHH
Confidence 99999999998765 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccCCceEEeCCcEEeecCCC-CCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeC
Q 022679 159 KAFTDCFNCLPVAALIDEKILCMHGGL-SPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFG 237 (293)
Q Consensus 159 ~~~~~~~~~lP~~~~i~~~~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG 237 (293)
..+.++|+.||++++++++++|||||+ +|...++++++++.||.+.++.++++|++||||... .+|.+++||.++.||
T Consensus 154 ~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg 232 (316)
T cd07417 154 DLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFG 232 (316)
T ss_pred HHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeC
Confidence 999999999999999999999999999 567889999999999999889999999999999854 689999999999999
Q ss_pred hhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 238 PDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 238 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
++++++||++||+++||||||++++||+.+.++.++..+|
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 272 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVKDEGYEVEHDGKCITVFS 272 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCcccceeEEEecCCeEEEEeC
Confidence 9999999999999999999999999998876665555555
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.8e-62 Score=450.94 Aligned_cols=245 Identities=44% Similarity=0.828 Sum_probs=229.6
Q ss_pred HHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeee
Q 022679 18 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYL 97 (293)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~v 97 (293)
++-+++.+++.. .++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|+
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 3 IDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred HHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 456677777654 589999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCc
Q 022679 98 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEK 177 (293)
Q Consensus 98 fLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~ 177 (293)
|||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..++|..|+..+|+..+|..+.++|++||++++++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCC------CCccc-CCCceeeeChhHHHHHHHHcCC
Q 022679 178 ILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVK------GWGMN-DRGVSYTFGPDKVSEFLKRHDL 250 (293)
Q Consensus 178 ~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~------~~~~~-~rG~~~~fG~~~~~~fl~~~~~ 250 (293)
++|||||++|.+.+++++++++||.+.|..++++|++||||..... +|.++ +||.++.||++++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999975422 47665 8999999999999999999999
Q ss_pred cEEEEeccccCCceeeeCCe
Q 022679 251 DLVCRAHQVVDFPTLSFSIF 270 (293)
Q Consensus 251 ~~iirgH~~~~~G~~~f~~~ 270 (293)
++||||||++++||+++.++
T Consensus 235 ~~iiR~He~~~~G~~~~~~~ 254 (305)
T cd07416 235 LSIIRAHEAQDAGYRMYRKS 254 (305)
T ss_pred eEEEEeccccccceEEecCC
Confidence 99999999999999987653
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=9.3e-62 Score=442.18 Aligned_cols=239 Identities=56% Similarity=0.990 Sum_probs=228.4
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHH
Q 022679 39 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLA 118 (293)
Q Consensus 39 ~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~ 118 (293)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcC
Q 022679 119 YKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNL 198 (293)
Q Consensus 119 lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i 198 (293)
+|+.+|.++++||||||.+.++..+||.+|+..+|+.++|..+.++|+.||++++++++++|||||++|.+.++++++.+
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 199 PRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 199 ~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
+||.+.++.+++.|++||||.....+|.+|+||.++.||++++++||++||+++||||||++++||+.+.++.++..+|
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 9999999999999999999987778999999999999999999999999999999999999999999876655555555
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=1.2e-59 Score=435.76 Aligned_cols=257 Identities=46% Similarity=0.832 Sum_probs=228.5
Q ss_pred HHHHHhccccCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCC------
Q 022679 22 IHRLTEVRFARP--GKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPK------ 93 (293)
Q Consensus 22 i~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~------ 93 (293)
|.+++....+.+ ..+..++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~ 81 (311)
T cd07419 2 ITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDI 81 (311)
T ss_pred hHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCC
Confidence 445555543332 446689999999999999999999999999999999999999999999999999998754
Q ss_pred --CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhH------HHHHHHhhhh
Q 022679 94 --ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNV------RLWKAFTDCF 165 (293)
Q Consensus 94 --~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~------~~~~~~~~~~ 165 (293)
.+|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||..++..+++. .+|..+.++|
T Consensus 82 ~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f 161 (311)
T cd07419 82 EYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLF 161 (311)
T ss_pred cCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999888854 6899999999
Q ss_pred ccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCC-CCCCCchhhhhhhCCCCCC--CCCCcccC---CCce--eeeC
Q 022679 166 NCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPT-AVPDTGLLCDLLWSDPGRD--VKGWGMND---RGVS--YTFG 237 (293)
Q Consensus 166 ~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~--~~~~~~~~---rG~~--~~fG 237 (293)
+.||++++++++++|||||++|.+.++++++.+.||. ..+..+++.|++||||... ..+|.+++ ||.+ +.||
T Consensus 162 ~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg 241 (311)
T cd07419 162 EWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFG 241 (311)
T ss_pred HhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeEC
Confidence 9999999999999999999999999999999999997 4456788999999999854 35676666 8887 7999
Q ss_pred hhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEecc
Q 022679 238 PDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRR 278 (293)
Q Consensus 238 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~ 278 (293)
++++++||++||+++||||||++++||+.+.++.++..+|.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa 282 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSA 282 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecC
Confidence 99999999999999999999999999988766655555553
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=8e-59 Score=435.75 Aligned_cols=267 Identities=32% Similarity=0.585 Sum_probs=231.8
Q ss_pred CccCChhhHHHHHHHHHhcccc--CCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceeEEecCCCCHHHHHH
Q 022679 10 GTIMDPNALDDIIHRLTEVRFA--RPGKQVQLSESEIKQLCVASRDIFMRQPNLLELE----APMKICGDVHGQYSDLLR 83 (293)
Q Consensus 10 ~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~L~~ 83 (293)
|..++.+.++.+|.++.+.... .+.....++.+++.+||++|+++|++||++++++ .|++||||||||+.+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ 83 (377)
T cd07418 4 GGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLF 83 (377)
T ss_pred CCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHH
Confidence 4457899999999999765311 1122235789999999999999999999999998 799999999999999999
Q ss_pred HHHhcCCCCC-CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhh---HHHHH
Q 022679 84 LFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN---VRLWK 159 (293)
Q Consensus 84 ~l~~~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~---~~~~~ 159 (293)
+|+..++++. +.|||||||||||++|+||+.+++++|+.+|.++++||||||.+.++..+||.+|+..+|+ ..+|+
T Consensus 84 ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~ 163 (377)
T cd07418 84 LLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYR 163 (377)
T ss_pred HHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHH
Confidence 9999999875 4599999999999999999999999999999999999999999999999999999999986 37999
Q ss_pred HHhhhhccCCceEEeCCcEEeecCCC---------------------------CCCCCChHhhhcCCCCC-CCCCCc---
Q 022679 160 AFTDCFNCLPVAALIDEKILCMHGGL---------------------------SPDLSHLDQIRNLPRPT-AVPDTG--- 208 (293)
Q Consensus 160 ~~~~~~~~lP~~~~i~~~~l~vHgGi---------------------------~p~~~~~~~i~~i~r~~-~~~~~~--- 208 (293)
.+.++|++||++++++++++|||||| +|.+.++++|+.++||. +.+..+
T Consensus 164 ~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~ 243 (377)
T cd07418 164 KCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNL 243 (377)
T ss_pred HHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccc
Confidence 99999999999999999999999999 44567899999999974 555544
Q ss_pred hhhhhhhCCCCCCCCCCccc-CCCceeeeChhHHHHHHHHcCCcEEEEeccc------------cCCceeeeCC---eEE
Q 022679 209 LLCDLLWSDPGRDVKGWGMN-DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQV------------VDFPTLSFSI---FFL 272 (293)
Q Consensus 209 ~~~dllWsdp~~~~~~~~~~-~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~------------~~~G~~~f~~---~~~ 272 (293)
+++|+|||||... .+|.++ +||.+++||++++++||++|++++||||||+ +++||+++.+ +++
T Consensus 244 i~~dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~l 322 (377)
T cd07418 244 IPGDVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKL 322 (377)
T ss_pred cceeeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcE
Confidence 5789999999864 566665 7999999999999999999999999999996 6799998653 434
Q ss_pred EEEec
Q 022679 273 FFWYR 277 (293)
Q Consensus 273 ~~~~~ 277 (293)
+.++|
T Consensus 323 iTvFS 327 (377)
T cd07418 323 ITLFS 327 (377)
T ss_pred EEEec
Confidence 44444
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.4e-57 Score=408.63 Aligned_cols=230 Identities=43% Similarity=0.853 Sum_probs=220.0
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHH
Q 022679 38 QLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLL 117 (293)
Q Consensus 38 ~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~ 117 (293)
.++++..+.|+.++.++|++|+++++++.||+|+|||||||.||.++|+..|-|..++|+|||||||||.+|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhc
Q 022679 118 AYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRN 197 (293)
Q Consensus 118 ~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~ 197 (293)
+||+.||..+++||||||++.+...+.|..||..+|+.++|+++++.|+.||+||..+++++|||||+||.+.++++|+.
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhhhhhhCCCCCCC------CCCc-ccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeee
Q 022679 198 LPRPTAVPDTGLLCDLLWSDPGRDV------KGWG-MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSF 267 (293)
Q Consensus 198 i~r~~~~~~~~~~~dllWsdp~~~~------~~~~-~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f 267 (293)
+.|..+.|..+..||+|||||.++. ..|. ++-||++|.|...++.+||+.||+-.|||+|+.++.||+-+
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMY 296 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY 296 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhh
Confidence 9999999999999999999997542 2233 34699999999999999999999999999999999999765
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-55 Score=385.09 Aligned_cols=253 Identities=46% Similarity=0.921 Sum_probs=240.3
Q ss_pred hhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCCCCe
Q 022679 16 NALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKAN 95 (293)
Q Consensus 16 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~ 95 (293)
..++..|+++..++ ++++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++|+..|..|+..
T Consensus 18 ~~vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtn 89 (319)
T KOG0371|consen 18 LDVDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTN 89 (319)
T ss_pred cccccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcc
Confidence 45788999999998 7899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhh-hHHHHHHHhhhhccCCceEEe
Q 022679 96 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALI 174 (293)
Q Consensus 96 ~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~-~~~~~~~~~~~~~~lP~~~~i 174 (293)
|+|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+.+.|||++||.++| +..+|..|.+.|+.+|+.|.|
T Consensus 90 ylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali 169 (319)
T KOG0371|consen 90 YLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALI 169 (319)
T ss_pred eeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999 578999999999999999999
Q ss_pred CCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEE
Q 022679 175 DEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVC 254 (293)
Q Consensus 175 ~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~ii 254 (293)
+++++|+|||++|.+.++++++.+.|.+++|.++..+|+|||||+.. -+|..++||.++.||.+..+.|-.+||++++-
T Consensus 170 ~~~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr-~gwg~sprgag~tfg~di~~~fn~~n~lslis 248 (319)
T KOG0371|consen 170 ESKIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDR-CGWGISPRGAGYTFGQDISEQFNHKNGLSLIS 248 (319)
T ss_pred ccceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccC-CCCCCCCCCCCcccchhhHHHhhccCCchHhH
Confidence 99999999999999999999999999999999999999999999854 88999999999999999999999999999999
Q ss_pred EeccccCCceeeeCCeEEEEEec
Q 022679 255 RAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 255 rgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
|+||.+.+||......-+...+|
T Consensus 249 Rahqlvm~g~nW~~~~~~vtiFS 271 (319)
T KOG0371|consen 249 RAHQLVMEGYNWYHLWNVVTIFS 271 (319)
T ss_pred HHHHHHhcccceeeecceeEEcc
Confidence 99999999998887653434444
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-49 Score=363.12 Aligned_cols=264 Identities=29% Similarity=0.539 Sum_probs=234.1
Q ss_pred ccCcCCccCChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CceeEEecCCCCHHH
Q 022679 5 QGQQQGTIMDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELE----APMKICGDVHGQYSD 80 (293)
Q Consensus 5 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~ 80 (293)
.|++++.++++..++.+|+.....+ .+++.-+..|+.+++++|++.|++-+++ ..++||||+||.++|
T Consensus 108 ~Gp~ls~Pl~~~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDD 179 (631)
T KOG0377|consen 108 NGPKLSLPLRKNHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDD 179 (631)
T ss_pred CCcccccCcCchHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccc
Confidence 5788999999999999999998876 7999999999999999999999999885 469999999999999
Q ss_pred HHHHHHhcCCCCCC-eeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhh---hHH
Q 022679 81 LLRLFEYGGYPPKA-NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF---NVR 156 (293)
Q Consensus 81 L~~~l~~~~~~~~~-~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~---~~~ 156 (293)
|.-+|-+.|+|..+ .|||.||+||||.+|+|+|..|+++-+.||..+++-|||||+.++|-.|||..|...+| +.+
T Consensus 180 L~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~ 259 (631)
T KOG0377|consen 180 LLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKR 259 (631)
T ss_pred eEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccH
Confidence 99999999999754 59999999999999999999999999999999999999999999999999999999998 468
Q ss_pred HHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCC---------CCC-------------CCCchhhhhh
Q 022679 157 LWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRP---------TAV-------------PDTGLLCDLL 214 (293)
Q Consensus 157 ~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~---------~~~-------------~~~~~~~dll 214 (293)
+.+.+.++|++||++.+++.++++||||+|. .+.++-+.+|+|. .+. .+...+.|++
T Consensus 260 Ilr~leevy~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DIm 338 (631)
T KOG0377|consen 260 ILRFLEEVYRWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIM 338 (631)
T ss_pred HHHHHHHHHHhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHH
Confidence 8899999999999999999999999999985 3455555555542 110 0234678999
Q ss_pred hCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 215 WSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 215 Wsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
||||......|++.-||.|++||++++..||++.+++++||+|||.++||+++++..++..+|
T Consensus 339 WSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFS 401 (631)
T KOG0377|consen 339 WSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFS 401 (631)
T ss_pred hcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEe
Confidence 999998777788778999999999999999999999999999999999999987765544444
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=307.32 Aligned_cols=240 Identities=41% Similarity=0.755 Sum_probs=222.7
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeec----CceeEEecCCCCHHHHHHHHHhcCCCCC-CeeeeeCCcccCCCCcHHH
Q 022679 38 QLSESEIKQLCVASRDIFMRQPNLLELE----APMKICGDVHGQYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLET 112 (293)
Q Consensus 38 ~~~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~L~~~l~~~~~~~~-~~~vfLGD~VDrG~~s~ev 112 (293)
.++..-+-+|+..++.++..+|++++++ ..+.|+||+||++.++.++++..|.|+. ..|+|.||++|||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 5677778899999999999999999985 3589999999999999999999999875 4699999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCC-CCCC
Q 022679 113 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSP-DLSH 191 (293)
Q Consensus 113 l~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p-~~~~ 191 (293)
...++..|+.+|++++++|||||...++..|||..++..+|.++.+..+.+.|..||++..|+++++.+|||+.. .-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999964 4468
Q ss_pred hHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeE
Q 022679 192 LDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFF 271 (293)
Q Consensus 192 ~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~ 271 (293)
+++++.|.|+...++.+..++++||||... .+..++.||.+..||++++++||+.|+++.|||||++.+.||+.-.++.
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 999999999988888999999999999855 8889999999999999999999999999999999999999999977776
Q ss_pred EEEEecc
Q 022679 272 LFFWYRR 278 (293)
Q Consensus 272 ~~~~~~~ 278 (293)
++..+|.
T Consensus 421 l~tvfsa 427 (476)
T KOG0376|consen 421 LITVFSA 427 (476)
T ss_pred EEEEecC
Confidence 7666663
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=6.4e-34 Score=251.42 Aligned_cols=198 Identities=48% Similarity=0.798 Sum_probs=163.3
Q ss_pred eEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhH
Q 022679 69 KICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 148 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 148 (293)
+|||||||++++|.++++.++..+.+.+|||||+||||+++.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999998877 8899999999999988776655443
Q ss_pred H---------HHhhhHHHHHHHhhhhccCCceEEeCC-cEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCC
Q 022679 149 C---------KRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDP 218 (293)
Q Consensus 149 ~---------~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 218 (293)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888999999999999986 89999999999886655544 2335566789999999
Q ss_pred CCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee-eeCCeEEEEEec
Q 022679 219 GRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL-SFSIFFLFFWYR 277 (293)
Q Consensus 219 ~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~-~f~~~~~~~~~~ 277 (293)
.........+.++. |+++.+.|++.++.+.|||||+++..|+. ...++++.++++
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg 209 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSG 209 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecC
Confidence 85433334444444 99999999999999999999999999985 245667788776
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=4.4e-28 Score=218.14 Aligned_cols=122 Identities=24% Similarity=0.434 Sum_probs=97.2
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCC---------CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCccc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYP---------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 136 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~---------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~ 136 (293)
.+++||||||||++.|.++|+.+++. ..+++|||||||||||+|.+|+++++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 36899999999999999999998874 45789999999999999999999998874 56689999999999
Q ss_pred chhhhhccc-------hhHHHHhh-------hHHHHHHHhhhhccCCceEEeC-CcEEeecCCCCCCC
Q 022679 137 ASINRIYGF-------YDECKRRF-------NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDL 189 (293)
Q Consensus 137 ~~~~~~~~f-------~~e~~~~~-------~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~ 189 (293)
++++...+- ..+....| ...+++.+.+|++++|++..++ ++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 887643220 01111112 1346677899999999998774 57999999998864
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=3.9e-27 Score=207.11 Aligned_cols=174 Identities=20% Similarity=0.289 Sum_probs=129.3
Q ss_pred eEEecCCCCHHHHHHHHHhcCC--------CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhh---cCCcEEEEcCCcccc
Q 022679 69 KICGDVHGQYSDLLRLFEYGGY--------PPKANYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 137 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~~~~~--------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~---~p~~v~~lrGNHE~~ 137 (293)
+||||||||+++|+++|+.+++ .+.+.+||+||+||||+++.+|++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35678999999999999999999999998754 467899999999999
Q ss_pred hhhhhccchhHHH-Hhh------hHHHH---HHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCC
Q 022679 138 SINRIYGFYDECK-RRF------NVRLW---KAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDT 207 (293)
Q Consensus 138 ~~~~~~~f~~e~~-~~~------~~~~~---~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 207 (293)
.++..+.+..... ... ...++ ..+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 9875433321110 000 01111 23578999999998876 59999999943
Q ss_pred chhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee-eeCCeEEEEEec
Q 022679 208 GLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL-SFSIFFLFFWYR 277 (293)
Q Consensus 208 ~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~-~f~~~~~~~~~~ 277 (293)
+|++.-....... + -|...+.++++.++.+++|+|||+++.|.. .+.|+++.++++
T Consensus 140 ------~w~r~y~~~~~~~---~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g 196 (208)
T cd07425 140 ------LWYRGYSKETSDK---E-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVG 196 (208)
T ss_pred ------HHhhHhhhhhhhc---c-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCC
Confidence 3332210000000 0 012568889999999999999999999886 788899999887
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=3.2e-26 Score=203.23 Aligned_cols=115 Identities=24% Similarity=0.422 Sum_probs=90.9
Q ss_pred eEEecCCCCHHHHHHHHHhcCCC--------CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhh
Q 022679 69 KICGDVHGQYSDLLRLFEYGGYP--------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 140 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~~~~~~--------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 140 (293)
+||||||||++.|+++|+.+++. +.+++|||||||||||+|.+|+++|++++ .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 69999999999999999998875 46789999999999999999999999875 345899999999998875
Q ss_pred hhcc------chh-----------HHHHhh--hHHHHHHHhhhhccCCceEEeCCcEEeecCCCC
Q 022679 141 RIYG------FYD-----------ECKRRF--NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS 186 (293)
Q Consensus 141 ~~~~------f~~-----------e~~~~~--~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 186 (293)
...+ +.. +..+.+ ..+.++...+||++||+....+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 3221 000 111111 1244577889999999998764 6999999986
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=2.8e-25 Score=198.59 Aligned_cols=121 Identities=28% Similarity=0.530 Sum_probs=97.0
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCCC----------CCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYPP----------KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 135 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~~----------~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 135 (293)
+|+.||||||||+++|+++|+.+++.+ .++++||||||||||+|.||+++|++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 479999999999999999999998753 46899999999999999999999998753 457999999999
Q ss_pred cchhhhhcc--------chhHHHHhh---hHHHHHHHhhhhccCCceEEeC-CcEEeecCCCCCCC
Q 022679 136 CASINRIYG--------FYDECKRRF---NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDL 189 (293)
Q Consensus 136 ~~~~~~~~~--------f~~e~~~~~---~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~ 189 (293)
.+.++...+ +. +....+ ..++.+.+.+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 988764322 21 111222 2456678899999999998775 46999999988753
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=2.2e-25 Score=203.27 Aligned_cols=120 Identities=22% Similarity=0.381 Sum_probs=97.3
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccc
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 145 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 145 (293)
+++||||||||+++|+++++.+++. ..+.++|+||+|||||+|.+|++++.++ +.++++|+||||.+.+...++.
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g~ 77 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAGI 77 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcCC
Confidence 5899999999999999999999875 5678999999999999999999999876 4579999999999988766654
Q ss_pred hhH-----HHHhhhHHHHHHHhhhhccCCceEEe-CCcEEeecCCCCCCCC
Q 022679 146 YDE-----CKRRFNVRLWKAFTDCFNCLPVAALI-DEKILCMHGGLSPDLS 190 (293)
Q Consensus 146 ~~e-----~~~~~~~~~~~~~~~~~~~lP~~~~i-~~~~l~vHgGi~p~~~ 190 (293)
... ..........+.+.+|++++|+...+ ++++++||||++|.+.
T Consensus 78 ~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~ 128 (275)
T PRK00166 78 KRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD 128 (275)
T ss_pred ccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC
Confidence 321 11111223345678999999998876 5679999999999874
No 25
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=4.8e-25 Score=195.14 Aligned_cols=174 Identities=19% Similarity=0.209 Sum_probs=117.7
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+|++++... ++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999886 5678999999999999999999998642 5889999999998864322
Q ss_pred chhH--------HHHhh---hHHHHHHHhhhhccCCceEEeC---CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchh
Q 022679 145 FYDE--------CKRRF---NVRLWKAFTDCFNCLPVAALID---EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLL 210 (293)
Q Consensus 145 f~~e--------~~~~~---~~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 210 (293)
-... ..... ..+.+..+.+|+++||+...+. +++++||||++... . +.. .+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~-~~~----~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-Y-EWQ----KD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-h-hhh----cc------CCc
Confidence 1000 00001 1234456678999999997653 46999999984321 1 110 11 012
Q ss_pred hhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 211 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 211 ~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
.+++|+++... ..+. .+ ...|.+.+|.||++++.... .+.++.++++
T Consensus 159 ~~~~w~r~~~~-~~~~--~~---------------~~~~~~~vv~GHT~~~~~~~--~~~~i~IDtG 205 (218)
T PRK11439 159 HQVLWSRSRLG-ERQK--GQ---------------GITGADHFWFGHTPLRHRVD--IGNLHYIDTG 205 (218)
T ss_pred cceEEcChhhh-hccc--cc---------------cccCCCEEEECCccCCCccc--cCCEEEEECC
Confidence 45688766411 0000 00 11245679999999876543 3456788786
No 26
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.93 E-value=2.1e-25 Score=201.56 Aligned_cols=119 Identities=28% Similarity=0.420 Sum_probs=98.0
Q ss_pred eeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccch
Q 022679 68 MKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (293)
Q Consensus 68 i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 146 (293)
++||||||||+++|+++|+.+++. +.+.++|+||+|||||+|.||++++++++ .++++|+||||.+.++..+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999986 57889999999999999999999999875 5899999999999887665543
Q ss_pred hHHHHh-----hhHHHHHHHhhhhccCCceEEeCC-cEEeecCCCCCCCC
Q 022679 147 DECKRR-----FNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLS 190 (293)
Q Consensus 147 ~e~~~~-----~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~ 190 (293)
...... ......+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 211111 122334568899999999988765 79999999999874
No 27
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.93 E-value=8.5e-25 Score=198.78 Aligned_cols=184 Identities=23% Similarity=0.298 Sum_probs=126.7
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCC------CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCC-cEEEEcCCcccch
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYP------PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECAS 138 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~------~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~-~v~~lrGNHE~~~ 138 (293)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 47999999999999999999875422 2457999999999999999999999999888876 6899999999877
Q ss_pred hhhhcc---------ch------------------------------------------------------hHHHHhhh-
Q 022679 139 INRIYG---------FY------------------------------------------------------DECKRRFN- 154 (293)
Q Consensus 139 ~~~~~~---------f~------------------------------------------------------~e~~~~~~- 154 (293)
+..... |. .+....|+
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 642211 00 00111221
Q ss_pred --------HHHHHHHhhhhccCCceEEeCCcE-------------EeecCCCCCCCCChHhhhcCC-CCCCCCCCchhhh
Q 022679 155 --------VRLWKAFTDCFNCLPVAALIDEKI-------------LCMHGGLSPDLSHLDQIRNLP-RPTAVPDTGLLCD 212 (293)
Q Consensus 155 --------~~~~~~~~~~~~~lP~~~~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~d 212 (293)
..+-+...+|++.||.....++ + +|||||+.|+..--+|.+.+. +-...| ..+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccc
Confidence 1233456789999999987654 5 999999999998777776543 111222 237
Q ss_pred hhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 213 LLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 213 llWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
++|.+... |. .++.. ...-++||-||+ +--.+.+.+++++++
T Consensus 237 ~l~~R~~f----~~-~~~~~--------------~~~~~~VVhGHt----~~~~~~~~Ri~iDtG 278 (304)
T cd07421 237 PLSGRKNV----WN-IPQEL--------------ADKKTIVVSGHH----GKLHIDGLRLIIDEG 278 (304)
T ss_pred ccccchhh----hc-Ccccc--------------cCCCeEEEECCC----CCceecCCEEEEECC
Confidence 88887752 11 11110 001267888998 334456777888886
No 28
>PHA02239 putative protein phosphatase
Probab=99.92 E-value=2.9e-24 Score=192.00 Aligned_cols=170 Identities=22% Similarity=0.292 Sum_probs=120.2
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCC--CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
++++|||||||++.|.++++.+... +.+.++|+|||||||++|.++++.++.+. ..+.++++|+||||.++++...+
T Consensus 2 ~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~~ 80 (235)
T PHA02239 2 AIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIMEN 80 (235)
T ss_pred eEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHhC
Confidence 6899999999999999999987543 46789999999999999999999998864 35668999999999987653211
Q ss_pred c-----h---------hHHHHhhh-------------------------------HHHHHHHhhhhccCCceEEeCCcEE
Q 022679 145 F-----Y---------DECKRRFN-------------------------------VRLWKAFTDCFNCLPVAALIDEKIL 179 (293)
Q Consensus 145 f-----~---------~e~~~~~~-------------------------------~~~~~~~~~~~~~lP~~~~i~~~~l 179 (293)
. . .+....|+ ...+..+.+|+++||+....+ +++
T Consensus 81 ~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~i 159 (235)
T PHA02239 81 VDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KYI 159 (235)
T ss_pred chhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CEE
Confidence 0 0 01111221 112345567999999998865 599
Q ss_pred eecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccc
Q 022679 180 CMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQV 259 (293)
Q Consensus 180 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~ 259 (293)
|||||+.|... +++ ....+++|.++ . .+.. .-+.+|.||++
T Consensus 160 fVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHTp 200 (235)
T PHA02239 160 FSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHTP 200 (235)
T ss_pred EEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCCC
Confidence 99999998753 221 13478899986 2 1111 12367788888
Q ss_pred cCCceeeeCCeEEEEEec
Q 022679 260 VDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 260 ~~~G~~~f~~~~~~~~~~ 277 (293)
+.++.-...+.++.++++
T Consensus 201 ~~~~~~~~~~~~I~IDtG 218 (235)
T PHA02239 201 TDSGEVEINGDMLMCDVG 218 (235)
T ss_pred CCCCcccccCCEEEeecC
Confidence 876553334556788876
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=7.2e-25 Score=198.80 Aligned_cols=120 Identities=23% Similarity=0.376 Sum_probs=99.6
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccc
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 145 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 145 (293)
+++||||||||+++|+++|+.+++. ..++++|+||+|||||+|.||++++.++. +++++|+||||.+.+...+|+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g~ 77 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAGI 77 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcCC
Confidence 5899999999999999999999976 46789999999999999999999998763 468899999999998877665
Q ss_pred h-----hHHHHhhhHHHHHHHhhhhccCCceEEeC-CcEEeecCCCCCCCC
Q 022679 146 Y-----DECKRRFNVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPDLS 190 (293)
Q Consensus 146 ~-----~e~~~~~~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~~~ 190 (293)
. +.....+..+..+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 78 ~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 78 SRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 2 22222233455677899999999987654 369999999999984
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.92 E-value=6e-24 Score=186.50 Aligned_cols=185 Identities=23% Similarity=0.272 Sum_probs=126.3
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
+|++||||||||+.+|+++++.+++. ..+.++|+||+||||+++.++++++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467889999999999999999998864 36899999999998876543
Q ss_pred c--hhHHHHhh---------hHHHHHHHhhhhccCCceEEeC---CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchh
Q 022679 145 F--YDECKRRF---------NVRLWKAFTDCFNCLPVAALID---EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLL 210 (293)
Q Consensus 145 f--~~e~~~~~---------~~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 210 (293)
. ..+..... ...+++.+.+||++||+...++ .++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 1 11111111 1224566788999999998774 368999999865431 11100 0 11122345
Q ss_pred hhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCCccc
Q 022679 211 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAGKNV 283 (293)
Q Consensus 211 ~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g~~~ 283 (293)
.+++|+++...... . ...-+.+.||.||++.+..+.. +..+++.++..+...
T Consensus 149 ~~~~w~~~~~~~~~-~------------------~~~~~~~~iV~GHTh~~~~~~~--~~~i~ID~Gsv~gg~ 200 (207)
T cd07424 149 EELLWSRTRIQKAQ-T------------------QPIKGVDAVVHGHTPVKRPLRL--GNVLYIDTGAVFDGN 200 (207)
T ss_pred eeeeeccchhhhcC-c------------------cccCCCCEEEECCCCCCcceEE--CCEEEEECCCCCCCe
Confidence 67888876421000 0 0011457799999998865543 456888887665543
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.89 E-value=5.5e-23 Score=182.01 Aligned_cols=182 Identities=20% Similarity=0.212 Sum_probs=117.3
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
+|++||||||||+++|+++++.+.+. ..+.++|+||+|||||+|.+|++++.. .++++||||||.+.++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 58999999999999999999998865 467888999999999999999998853 26899999999988864321
Q ss_pred chhHH--------HHhhh---HHHHHHHhhhhccCCceEEeC---CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchh
Q 022679 145 FYDEC--------KRRFN---VRLWKAFTDCFNCLPVAALID---EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLL 210 (293)
Q Consensus 145 f~~e~--------~~~~~---~~~~~~~~~~~~~lP~~~~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 210 (293)
-.... ..... ........+|+++||+...+. .++++||||++... .+.. .....
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~--~~~~----------~~~~~ 156 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDE--YDFG----------KEIAE 156 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCch--hhhc----------cccch
Confidence 00000 00001 122334566999999998763 36899999984321 1110 01112
Q ss_pred hhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHH-HHcCCcEEEEeccccCCceeeeCCeEEEEEec-cCCcccc
Q 022679 211 CDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFL-KRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR-RAGKNVP 284 (293)
Q Consensus 211 ~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl-~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~-~~g~~~~ 284 (293)
.+++|.++... ..+ +.+. ...+.+.+|.||++.+.-. . .+.++++.++ .-|+...
T Consensus 157 ~~~~w~r~~~~-~~~----------------~~~~~~~~~~~~vv~GHTh~~~~~-~-~~~~i~IDtGs~~gG~Lt 213 (218)
T PRK09968 157 SELLWPVDRVQ-KSL----------------NGELQQINGADYFIFGHMMFDNIQ-T-FANQIYIDTGSPKSGRLS 213 (218)
T ss_pred hhceeCcHHHh-hCc----------------cccccccCCCCEEEECCCCcCcce-e-ECCEEEEECCCCCCCcee
Confidence 45578654311 000 0011 1346789999999987432 2 3346777776 4444443
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.48 E-value=6.6e-13 Score=108.10 Aligned_cols=158 Identities=25% Similarity=0.290 Sum_probs=101.4
Q ss_pred ceeEEecCCCCHHHH----HHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHH--HHhhhhcCCcEEEEcCCcccchhh
Q 022679 67 PMKICGDVHGQYSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASIN 140 (293)
Q Consensus 67 ~i~viGDIHG~~~~L----~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll--~~lk~~~p~~v~~lrGNHE~~~~~ 140 (293)
||+++||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 44444444456678889999999999888776654 444556778999999999988765
Q ss_pred hhccchhHHH----------------------------------HhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCC
Q 022679 141 RIYGFYDECK----------------------------------RRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLS 186 (293)
Q Consensus 141 ~~~~f~~e~~----------------------------------~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~ 186 (293)
.......... .............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 3222111111 000011111122222223333344557999999887
Q ss_pred CCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEecccc
Q 022679 187 PDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 260 (293)
Q Consensus 187 p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~ 260 (293)
+......+. .....+...+..++++.++++++.||++.
T Consensus 162 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 644221111 12345677899999999999999999975
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.33 E-value=3.4e-11 Score=100.28 Aligned_cols=129 Identities=20% Similarity=0.195 Sum_probs=88.3
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccch
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 146 (293)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998654 678999999999998765 1 123469999999997532
Q ss_pred hHHHHhhhHHHHHHHhhhhccCCceEEe--CC-cEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCC
Q 022679 147 DECKRRFNVRLWKAFTDCFNCLPVAALI--DE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVK 223 (293)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i--~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 223 (293)
+..+|....+ ++ +++++||...+....
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~~~~~-------------------------------- 91 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLYGVKNG-------------------------------- 91 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcccccccc--------------------------------
Confidence 3455644433 33 699999864321100
Q ss_pred CCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCCc
Q 022679 224 GWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAGK 281 (293)
Q Consensus 224 ~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g~ 281 (293)
.+. .++++..+.++++.||++.+.... . ++.+++-.++.|.
T Consensus 92 --------------~~~-~~~~~~~~~d~vi~GHtH~~~~~~-~-~~~~~inpGs~~~ 132 (155)
T cd00841 92 --------------LDR-LYLAKEGGADVVLYGHTHIPVIEK-I-GGVLLLNPGSLSL 132 (155)
T ss_pred --------------hhh-hhhhhhcCCCEEEECcccCCccEE-E-CCEEEEeCCCccC
Confidence 001 345677789999999999886442 2 3445554444443
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.30 E-value=5e-11 Score=102.42 Aligned_cols=68 Identities=22% Similarity=0.331 Sum_probs=55.4
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCC--------cHHHHHHHHHhhhhcCCcEEEEcCCcccch
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECAS 138 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~--------s~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 138 (293)
++.++||+||++.+++++++.+...+.+.++++||++|+|+. +.++++.+..+ +.++++++||||...
T Consensus 2 ri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~~ 77 (182)
T PRK09453 2 KLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSEV 77 (182)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcchh
Confidence 689999999999999999998755667889999999999873 45666666433 347999999999753
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.19 E-value=2.5e-10 Score=94.29 Aligned_cols=134 Identities=23% Similarity=0.294 Sum_probs=85.2
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccch
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 146 (293)
|+.++||+|++.+.+.++++.+ ...+.++++||+++ ..++++.+... +++.++||||...........
T Consensus 2 ki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~~ 69 (156)
T PF12850_consen 2 KIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDEE 69 (156)
T ss_dssp EEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECTC
T ss_pred EEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhcc
Confidence 7899999999999999999998 34677889999999 37777777544 699999999965433221100
Q ss_pred hHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCc
Q 022679 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (293)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 226 (293)
. +...... ..-+.+++++||....
T Consensus 70 ----------~------~~~~~~~-~~~~~~i~~~H~~~~~--------------------------------------- 93 (156)
T PF12850_consen 70 ----------Y------LLDALRL-TIDGFKILLSHGHPYD--------------------------------------- 93 (156)
T ss_dssp ----------S------SHSEEEE-EETTEEEEEESSTSSS---------------------------------------
T ss_pred ----------c------cccceee-eecCCeEEEECCCCcc---------------------------------------
Confidence 0 1111111 1124479999995543
Q ss_pred ccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEec
Q 022679 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYR 277 (293)
Q Consensus 227 ~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~ 277 (293)
...+.+.+.+.+...+.++++.||...+.-.+ ..+. .++..+
T Consensus 94 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~-~~~~~G 135 (156)
T PF12850_consen 94 -------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGI-HVINPG 135 (156)
T ss_dssp -------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTE-EEEEE-
T ss_pred -------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCE-EEEECC
Confidence 00234456678889999999999999865555 3443 333333
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.17 E-value=5.6e-10 Score=93.57 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=48.8
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
++.++||+||++.+++.+++..... +.+.++++||++ +.+++..+..+ ...++.++||||..
T Consensus 2 ~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 2 KILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred EEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 6899999999998887777766554 567888999998 46777776544 23599999999973
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.14 E-value=5.5e-10 Score=91.19 Aligned_cols=118 Identities=19% Similarity=0.200 Sum_probs=79.2
Q ss_pred ceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcH--HHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 67 PMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~--evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
++.++||+||++. .....+.+.++++||+++++..+- +.+.++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999977 122345677889999999886432 2444444332 1 236789999996411
Q ss_pred chhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCC
Q 022679 145 FYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKG 224 (293)
Q Consensus 145 f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 224 (293)
.-+.+++++||.+.+.. +. . ..
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~---~~-------------------~--------~~ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL---DL-------------------V--------SS 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc---cc-------------------c--------cc
Confidence 11446999999432210 00 0 00
Q ss_pred CcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee
Q 022679 225 WGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL 265 (293)
Q Consensus 225 ~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 265 (293)
....|...+.+++++.+.+.++.||...+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567788999999999999999999999987
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.04 E-value=3e-09 Score=95.09 Aligned_cols=156 Identities=20% Similarity=0.221 Sum_probs=95.6
Q ss_pred ceeEEecCCCCHHHHH-HHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhh---
Q 022679 67 PMKICGDVHGQYSDLL-RLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRI--- 142 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~-~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~--- 142 (293)
+|+++|||||++.... +.++.. ..+.++++||+++ .+.+++..+..+ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 334332 3578889999986 456777766544 3469999999997653200
Q ss_pred c---------------------------------c--------ch-hHHHHhhh-HHHHHHHhhhhccCCceEEeCCcEE
Q 022679 143 Y---------------------------------G--------FY-DECKRRFN-VRLWKAFTDCFNCLPVAALIDEKIL 179 (293)
Q Consensus 143 ~---------------------------------~--------f~-~e~~~~~~-~~~~~~~~~~~~~lP~~~~i~~~~l 179 (293)
+ + +. .++...|+ ...++++...++.++.+......++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 01 12333342 2445556667777764433344799
Q ss_pred eecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcC----CcEEEE
Q 022679 180 CMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHD----LDLVCR 255 (293)
Q Consensus 180 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~----~~~iir 255 (293)
+.|++++-.. ++.+ +|+ ...|.+.. .-+|...+.+.+++.. +++++-
T Consensus 152 iaH~~~~G~g---~~~~--------------------~~c--g~d~~~~~----~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAE--------------------DPC--GRDWKPPG----GDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---cccc--------------------ccc--ccccCCcC----CCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999986432 1111 111 12343311 2367777777776655 799999
Q ss_pred eccccC
Q 022679 256 AHQVVD 261 (293)
Q Consensus 256 gH~~~~ 261 (293)
||-...
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 998876
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.96 E-value=9.5e-09 Score=80.94 Aligned_cols=118 Identities=25% Similarity=0.348 Sum_probs=85.8
Q ss_pred eEEecCCCCHHHHHHHH--HhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccch
Q 022679 69 KICGDVHGQYSDLLRLF--EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l--~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 146 (293)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33334556778899999999988777655433333446678999999999
Q ss_pred hHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCc
Q 022679 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (293)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 226 (293)
++++|..+.+....... .
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~-------------------------------~ 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSP-------------------------------D 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcc-------------------------------c
Confidence 88999977553211000 0
Q ss_pred ccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceee
Q 022679 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLS 266 (293)
Q Consensus 227 ~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 266 (293)
...........+.+.+.+.+|.||......+..
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 000556788899999999999999999887764
No 40
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.96 E-value=1e-08 Score=87.21 Aligned_cols=65 Identities=20% Similarity=0.226 Sum_probs=46.6
Q ss_pred eeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCc-HHHHHHHHHhhhhcCCcEEEEcCCcccch
Q 022679 68 MKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 138 (293)
Q Consensus 68 i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s-~evl~ll~~lk~~~p~~v~~lrGNHE~~~ 138 (293)
|.++||+||++..+.. ......+.+.+|+.||++++|... .+.+..+. ..+..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999998877 333334567888999999998763 33333332 23456999999999754
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.92 E-value=4.5e-08 Score=87.04 Aligned_cols=71 Identities=10% Similarity=0.163 Sum_probs=57.4
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
.++.+++|+||++..++++++.+...+.+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987654566889999999999976766666665553 2344799999999975
No 42
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.85 E-value=5.2e-08 Score=79.25 Aligned_cols=107 Identities=16% Similarity=0.176 Sum_probs=75.5
Q ss_pred eEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhH
Q 022679 69 KICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDE 148 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 148 (293)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 4899999998877777665 35568899999973 3445555544 1335899999999
Q ss_pred HHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCccc
Q 022679 149 CKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMN 228 (293)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~ 228 (293)
-+++++|+-+.+ ... .+
T Consensus 57 ---------------------------~~Ilv~H~pp~~-~~~------------------------~~----------- 73 (129)
T cd07403 57 ---------------------------VDILLTHAPPAG-IGD------------------------GE----------- 73 (129)
T ss_pred ---------------------------cCEEEECCCCCc-CcC------------------------cc-----------
Confidence 368999983211 000 00
Q ss_pred CCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee
Q 022679 229 DRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL 265 (293)
Q Consensus 229 ~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 265 (293)
+ ...-|...+.+++++.+.++++-||...+..+.
T Consensus 74 -~--~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 -D--FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred -c--ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0 011355678889999999999999999998887
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.84 E-value=7.1e-08 Score=82.85 Aligned_cols=126 Identities=21% Similarity=0.267 Sum_probs=80.6
Q ss_pred ceeEEecCC-CCHH-----HHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhh
Q 022679 67 PMKICGDVH-GQYS-----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 140 (293)
Q Consensus 67 ~i~viGDIH-G~~~-----~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 140 (293)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .++++++..++ .+++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 35555543 34578889999987 77777775542 25999999999631
Q ss_pred hhccchhHHHHhhhHHHHHHHhhhhccCCceEEe--C-CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCC
Q 022679 141 RIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI--D-EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSD 217 (293)
Q Consensus 141 ~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i--~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsd 217 (293)
.+|....+ + .+++++||..-. +
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~-------------~---------------- 91 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV-------------P---------------- 91 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC-------------C----------------
Confidence 33443333 3 379999984210 0
Q ss_pred CCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCC
Q 022679 218 PGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAG 280 (293)
Q Consensus 218 p~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g 280 (293)
+ ...+.+.++.+..+.+++|.||++.+.-. ..+ +++++=.++.|
T Consensus 92 -------~----------~~~~~~~~~~~~~~~dvii~GHTH~p~~~-~~~-g~~viNPGSv~ 135 (178)
T cd07394 92 -------W----------GDPDSLAALQRQLDVDILISGHTHKFEAF-EHE-GKFFINPGSAT 135 (178)
T ss_pred -------C----------CCHHHHHHHHHhcCCCEEEECCCCcceEE-EEC-CEEEEECCCCC
Confidence 0 01334566777889999999999987443 333 34444344444
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.79 E-value=2.9e-08 Score=83.62 Aligned_cols=67 Identities=24% Similarity=0.229 Sum_probs=47.6
Q ss_pred eeEEecCCCCHHHHHHHHH-hcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 68 MKICGDVHGQYSDLLRLFE-YGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 68 i~viGDIHG~~~~L~~~l~-~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
+.++||+|++...+...+. .....+.+.++++||+++++.....+. ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 4689999999887766552 233345567889999999887665543 222 223456799999999986
No 45
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.61 E-value=9.9e-07 Score=72.27 Aligned_cols=117 Identities=22% Similarity=0.225 Sum_probs=74.0
Q ss_pred eeEEecCCCCHH----------HHHHHHHhcCCCCCCeeeeeCCcccCCCCc-H-HHHHHHHHhhhhcCCcEEEEcCCcc
Q 022679 68 MKICGDVHGQYS----------DLLRLFEYGGYPPKANYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHE 135 (293)
Q Consensus 68 i~viGDIHG~~~----------~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s-~-evl~ll~~lk~~~p~~v~~lrGNHE 135 (293)
++.++|+|=... .|.++++.....+.+.++++||+++.|... . +...++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467889993211 122344444444567888999999988742 1 2233333332111 37999999999
Q ss_pred cchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhh
Q 022679 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLW 215 (293)
Q Consensus 136 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllW 215 (293)
. ++++|..+.+....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~------------------------ 94 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGS------------------------ 94 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCcc------------------------
Confidence 7 88899855431100
Q ss_pred CCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee
Q 022679 216 SDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL 265 (293)
Q Consensus 216 sdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 265 (293)
+.... .+.+.+.+++++.++++++.||...+..+.
T Consensus 95 ---------~~~~~------~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 ---------GRERL------LDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ---------ccccC------CCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00000 045678889999999999999999987665
No 46
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.59 E-value=6.2e-08 Score=78.36 Aligned_cols=133 Identities=39% Similarity=0.608 Sum_probs=106.2
Q ss_pred hhhhccchhHHHHhhhHH-HHHH---HhhhhccCCceEEeCC-cEEeecCCCCCCC-CChHhhhcCCCCC--CCCCCchh
Q 022679 139 INRIYGFYDECKRRFNVR-LWKA---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-SHLDQIRNLPRPT--AVPDTGLL 210 (293)
Q Consensus 139 ~~~~~~f~~e~~~~~~~~-~~~~---~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 210 (293)
+...+++.+++...+... .|.. ..++|+.+|+.+.+++ .++|.|++++|.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 345567777766666543 5555 8999999999999888 8999999999976 6788888777765 56667777
Q ss_pred hhhhhCCCCCC-CCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCC-eEE
Q 022679 211 CDLLWSDPGRD-VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSI-FFL 272 (293)
Q Consensus 211 ~dllWsdp~~~-~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~-~~~ 272 (293)
.+.+|+++... ...|.++++|....| ++....|...+..+.+.++|+....++....+ +.+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~l 145 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLL 145 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCee
Confidence 77799998863 678999999998777 78888899888888899999999999977655 433
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.58 E-value=8.5e-07 Score=79.53 Aligned_cols=175 Identities=18% Similarity=0.263 Sum_probs=90.1
Q ss_pred ceeEEecCCCC------HHHHHHHHHhcCCCCCCeeeeeCCcccC--C-----CCcHHHHHHHHHhhhhcCCcEEEEcCC
Q 022679 67 PMKICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRGN 133 (293)
Q Consensus 67 ~i~viGDIHG~------~~~L~~~l~~~~~~~~~~~vfLGD~VDr--G-----~~s~evl~ll~~lk~~~p~~v~~lrGN 133 (293)
++++++|+|.. ...+.+.++... ...+.++++||++|. | +...+++.++..++ ..+..++++.||
T Consensus 2 ~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~-~~g~~v~~v~GN 79 (241)
T PRK05340 2 PTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDPSPFAREIAAALKALS-DSGVPCYFMHGN 79 (241)
T ss_pred cEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHH-HcCCeEEEEeCC
Confidence 68999999954 234555554321 345778899999985 2 23456677776664 233579999999
Q ss_pred cccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCC-cEEeecCCCCCCCC-ChHhhhcCCC-CC------CC
Q 022679 134 HECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLS-HLDQIRNLPR-PT------AV 204 (293)
Q Consensus 134 HE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~-~~~~i~~i~r-~~------~~ 204 (293)
||...... | .+..+. ..+.. |....+++ +++++||-.-+.-. ....++.+-| |. ..
T Consensus 80 HD~~~~~~---~----~~~~g~-------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~~ 144 (241)
T PRK05340 80 RDFLLGKR---F----AKAAGM-------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFLAL 144 (241)
T ss_pred CchhhhHH---H----HHhCCC-------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 99743210 0 000110 11111 22233344 69999997654211 1112222211 10 00
Q ss_pred CCCchhhhhh--hCCCCCCCCCCcccC-CC-ceeeeChhHHHHHHHHcCCcEEEEeccccCCce
Q 022679 205 PDTGLLCDLL--WSDPGRDVKGWGMND-RG-VSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPT 264 (293)
Q Consensus 205 ~~~~~~~dll--Wsdp~~~~~~~~~~~-rG-~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~ 264 (293)
| ......+. |+.-+ -..+. +. .-.-..++.+.+.+++.+.+.+|.||.+.+.-.
T Consensus 145 p-~~~~~~ia~~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 145 P-LSIRLRIAAKMRAKS-----KAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred C-HHHHHHHHHHHHHHH-----HHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee
Confidence 0 00000000 00000 00000 01 112234577888999999999999999987543
No 48
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.53 E-value=7e-07 Score=79.90 Aligned_cols=68 Identities=21% Similarity=0.156 Sum_probs=49.6
Q ss_pred ceeEEecCCCCH------HHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 67 PMKICGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 67 ~i~viGDIHG~~------~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
++.+++|+|.++ ..|.++++.+...+.+-+|+.||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999763 23566666655455677889999999877666666655542 345799999999964
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.39 E-value=1.3e-06 Score=77.91 Aligned_cols=176 Identities=15% Similarity=0.143 Sum_probs=87.9
Q ss_pred eeEEecCCCCH------HHHHHHHHhcCCCCCCeeeeeCCcccCC-----CC--cHHHHHHHHHhhhhcCCcEEEEcCCc
Q 022679 68 MKICGDVHGQY------SDLLRLFEYGGYPPKANYLFLGDYVDRG-----KQ--SLETICLLLAYKIKYPENFFLLRGNH 134 (293)
Q Consensus 68 i~viGDIHG~~------~~L~~~l~~~~~~~~~~~vfLGD~VDrG-----~~--s~evl~ll~~lk~~~p~~v~~lrGNH 134 (293)
+++++|+|... ..+.+.+.... .+.+.++++||++|.. +. ..++...+..++. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 23444444432 1457788999999952 11 1345555555542 356799999999
Q ss_pred ccchhhhhccchhHHHHhhhHHHHHHH-hhhhccCCceEEe-CCcEEeecCCCCCCC-CChHhhhcC-CCCC------CC
Q 022679 135 ECASINRIYGFYDECKRRFNVRLWKAF-TDCFNCLPVAALI-DEKILCMHGGLSPDL-SHLDQIRNL-PRPT------AV 204 (293)
Q Consensus 135 E~~~~~~~~~f~~e~~~~~~~~~~~~~-~~~~~~lP~~~~i-~~~~l~vHgGi~p~~-~~~~~i~~i-~r~~------~~ 204 (293)
|...-. .+.+.. ...+.. |....+ +.+++++||-.-..- ....-.+.+ ..|. ..
T Consensus 79 D~~~~~---------------~~~~~~gi~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l 142 (231)
T TIGR01854 79 DFLIGK---------------RFAREAGMTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHL 142 (231)
T ss_pred chhhhH---------------HHHHHCCCEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 974211 011111 011111 222233 457999999654210 011111111 1110 00
Q ss_pred CC--CchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCcee
Q 022679 205 PD--TGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTL 265 (293)
Q Consensus 205 ~~--~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~ 265 (293)
|. ...+...+++..... .. ...-.-....+..+.+.++..+.+++|.||++.+.-+.
T Consensus 143 ~~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~ 201 (231)
T TIGR01854 143 PLAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHP 201 (231)
T ss_pred CHHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceee
Confidence 00 111222233321100 00 00001122356778888999999999999999886554
No 50
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.38 E-value=1.8e-06 Score=76.59 Aligned_cols=69 Identities=23% Similarity=0.236 Sum_probs=46.2
Q ss_pred ceeEEecCCCC------------HHHHHHHHHhcCCC--CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcC
Q 022679 67 PMKICGDVHGQ------------YSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 132 (293)
Q Consensus 67 ~i~viGDIHG~------------~~~L~~~l~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 132 (293)
|+++++|+|=. ...|+++++.+... +.+-+|++||+++.|.. +.+..+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSP--ESYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCH--HHHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34677777765443 56778899999998753 2222222222223557999999
Q ss_pred Ccccc
Q 022679 133 NHECA 137 (293)
Q Consensus 133 NHE~~ 137 (293)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.33 E-value=4.8e-06 Score=71.14 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=81.5
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccc
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 145 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 145 (293)
.++.|+||.||...+-.+..+.......+.+|.+||++...... .+.. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc-----
Confidence 46899999999997656666665556677888999999855421 1111 0245899999999975432
Q ss_pred hhHHHHhhhHHHHHHHhhhhccCCce--EEeC-CcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCC
Q 022679 146 YDECKRRFNVRLWKAFTDCFNCLPVA--ALID-EKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDV 222 (293)
Q Consensus 146 ~~e~~~~~~~~~~~~~~~~~~~lP~~--~~i~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~ 222 (293)
..+|-. ..++ -+++++||..-. .
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~--------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF-V--------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-c---------------------------------
Confidence 112222 2334 489999995432 1
Q ss_pred CCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceee
Q 022679 223 KGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLS 266 (293)
Q Consensus 223 ~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 266 (293)
......++.+-+..+.+.+|.||++.+.-++.
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~ 126 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAEKV 126 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEEEE
Confidence 01234567788888999999999998854443
No 52
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.30 E-value=5.7e-06 Score=75.31 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=49.8
Q ss_pred ceeEEecCC--C-----------CHHHHHHHHHhcCCCCCCeeeeeCCcccCCCC-cHHHHHHHHHhhhhcCCcEEEEcC
Q 022679 67 PMKICGDVH--G-----------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 132 (293)
Q Consensus 67 ~i~viGDIH--G-----------~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~-s~evl~ll~~lk~~~p~~v~~lrG 132 (293)
++.+++|+| . ....|.++++.+.....+-+|++||+++.|.. +.+-+..+...-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 688999999 2 24667777777654456778899999998863 223333333322233457999999
Q ss_pred Ccccchh
Q 022679 133 NHECASI 139 (293)
Q Consensus 133 NHE~~~~ 139 (293)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9997643
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.25 E-value=3.1e-05 Score=67.18 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=44.4
Q ss_pred CceeEEecCCCCHH------------HHHHHHHhcCCCCCCeeeeeCCcccCCCCc---HHHHHHHHHhhhhcCCcEEEE
Q 022679 66 APMKICGDVHGQYS------------DLLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLL 130 (293)
Q Consensus 66 ~~i~viGDIHG~~~------------~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~~v~~l 130 (293)
-++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++......+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36889999996222 122222222233457789999999977653 555555544333345679999
Q ss_pred cCCcc
Q 022679 131 RGNHE 135 (293)
Q Consensus 131 rGNHE 135 (293)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.15 E-value=4.6e-06 Score=76.19 Aligned_cols=70 Identities=20% Similarity=0.074 Sum_probs=50.6
Q ss_pred CceeEEecCCCC----HHHHHHHHHhcCCCCCCeeeeeCCcccCC--CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 66 APMKICGDVHGQ----YSDLLRLFEYGGYPPKANYLFLGDYVDRG--KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 66 ~~i~viGDIHG~----~~~L~~~l~~~~~~~~~~~vfLGD~VDrG--~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
-++.+++|+|.. ...+.++++.+...+.+-+++.||++|++ ....++...+..++. +..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~--~~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAE--CAPTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhh--cCCEEEecCCCCcc
Confidence 469999999976 55677777766555667888999999954 233345555665553 34599999999974
No 55
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.15 E-value=1.9e-05 Score=69.70 Aligned_cols=69 Identities=22% Similarity=0.206 Sum_probs=41.9
Q ss_pred ceeEEecCCCC----HHHH----HHHHHhcCCCCCCeeeeeCCcccCCCCcH--HHH-HHHHHhhhhcCCcEEEEcCCcc
Q 022679 67 PMKICGDVHGQ----YSDL----LRLFEYGGYPPKANYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHE 135 (293)
Q Consensus 67 ~i~viGDIHG~----~~~L----~~~l~~~~~~~~~~~vfLGD~VDrG~~s~--evl-~ll~~lk~~~p~~v~~lrGNHE 135 (293)
+++++||+|-- ...+ ..+.+.+.....+-+|++||+++.+.... +.+ ..+..++ ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 57899999952 2223 33344433334567889999999998433 222 2222221 12446899999999
Q ss_pred c
Q 022679 136 C 136 (293)
Q Consensus 136 ~ 136 (293)
.
T Consensus 81 ~ 81 (214)
T cd07399 81 L 81 (214)
T ss_pred c
Confidence 4
No 56
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.15 E-value=4.3e-06 Score=73.41 Aligned_cols=71 Identities=27% Similarity=0.227 Sum_probs=52.2
Q ss_pred CceeEEecCCCCHH----HHHHHHHhcCCCCCCeeeeeCCcccCCCCcH-HHHHHHHHhhhhcCCcEEEEcCCcccch
Q 022679 66 APMKICGDVHGQYS----DLLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 138 (293)
Q Consensus 66 ~~i~viGDIHG~~~----~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll~~lk~~~p~~v~~lrGNHE~~~ 138 (293)
-++.+++|+|.... .+.++++.+.....+.+++.||++|.+.... ++..++..++ .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 46899999998743 6777777665555677889999999987765 4555554332 4457999999999753
No 57
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.11 E-value=7e-05 Score=68.41 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=47.0
Q ss_pred CceeEEecCC-C-----------CHHHHHHHHHhcCC--CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEc
Q 022679 66 APMKICGDVH-G-----------QYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 131 (293)
Q Consensus 66 ~~i~viGDIH-G-----------~~~~L~~~l~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lr 131 (293)
-+++.++|+| . ..+.|.++++.+.. ++.+-+|+.||+++.|. .+-+..+...-...+..++++.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 4689999999 1 24667788876533 23467889999999874 2333333332223456799999
Q ss_pred CCcccc
Q 022679 132 GNHECA 137 (293)
Q Consensus 132 GNHE~~ 137 (293)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 58
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.10 E-value=7.9e-05 Score=66.49 Aligned_cols=31 Identities=10% Similarity=0.089 Sum_probs=24.3
Q ss_pred ChhHHHHHHHHcCCcEEEEeccccCCceeee
Q 022679 237 GPDKVSEFLKRHDLDLVCRAHQVVDFPTLSF 267 (293)
Q Consensus 237 G~~~~~~fl~~~~~~~iirgH~~~~~G~~~f 267 (293)
+...+.+.+++.++++++.||.....-...|
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~ 211 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAI 211 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccc
Confidence 4456778888899999999999987665534
No 59
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.00 E-value=0.00015 Score=65.60 Aligned_cols=71 Identities=11% Similarity=-0.018 Sum_probs=43.6
Q ss_pred ceeEEecCCCCH----------------HHHHHHHHhcCCC--CCCeeeeeCCcccCCCCcH---HHHHHHHH-hhh-hc
Q 022679 67 PMKICGDVHGQY----------------SDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSL---ETICLLLA-YKI-KY 123 (293)
Q Consensus 67 ~i~viGDIHG~~----------------~~L~~~l~~~~~~--~~~~~vfLGD~VDrG~~s~---evl~ll~~-lk~-~~ 123 (293)
+++++||+|--. ..|+++++.+... ..+-++++||+++.|...- +.+..+.. ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888663 2355666665432 4566789999999887542 11222222 121 12
Q ss_pred CCcEEEEcCCcccc
Q 022679 124 PENFFLLRGNHECA 137 (293)
Q Consensus 124 p~~v~~lrGNHE~~ 137 (293)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 44699999999974
No 60
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.99 E-value=8e-06 Score=71.36 Aligned_cols=29 Identities=17% Similarity=0.079 Sum_probs=22.7
Q ss_pred ChhHHHHHHHHcCCcEEEEeccccCCcee
Q 022679 237 GPDKVSEFLKRHDLDLVCRAHQVVDFPTL 265 (293)
Q Consensus 237 G~~~~~~fl~~~~~~~iirgH~~~~~G~~ 265 (293)
....+.+.++..+.+.+|.||+..+.-.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 34556677788999999999999875444
No 61
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.97 E-value=8.9e-05 Score=73.62 Aligned_cols=111 Identities=18% Similarity=0.238 Sum_probs=59.8
Q ss_pred CceeEEecCC-CCH----HHHHHHHHhcC---------CCCCCeeeeeCCcccC-CCCc---------------HHHHHH
Q 022679 66 APMKICGDVH-GQY----SDLLRLFEYGG---------YPPKANYLFLGDYVDR-GKQS---------------LETICL 115 (293)
Q Consensus 66 ~~i~viGDIH-G~~----~~L~~~l~~~~---------~~~~~~~vfLGD~VDr-G~~s---------------~evl~l 115 (293)
..+++++|+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 4689999999 652 22344433322 1234678899999994 3221 133444
Q ss_pred HHHhhhhcCCcEEEEcCCcccchhhhhc-cchhHHHHhhhHHHHH-HHhhhhccCCceEEeCC-cEEeecCC
Q 022679 116 LLAYKIKYPENFFLLRGNHECASINRIY-GFYDECKRRFNVRLWK-AFTDCFNCLPVAALIDE-KILCMHGG 184 (293)
Q Consensus 116 l~~lk~~~p~~v~~lrGNHE~~~~~~~~-~f~~e~~~~~~~~~~~-~~~~~~~~lP~~~~i~~-~~l~vHgG 184 (293)
|..+. ..-.+++++||||........ .+... + ...+. .-..++.. |....+++ +++++||-
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~----l-~~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~ 387 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEE----I-RSLFPEHNVTFVSN-PALVNLHGVDVLIYHGR 387 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhhccCCCCccHH----H-HHhcCcCCeEEecC-CeEEEECCEEEEEECCC
Confidence 44332 334799999999975432211 11111 1 11111 11234444 65555554 68999984
No 62
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.85 E-value=0.00026 Score=59.44 Aligned_cols=47 Identities=26% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCCCeeeeeCCcccCCCCc-HHHH-HHHHHhhhh---c-CCcEEEEcCCcccc
Q 022679 91 PPKANYLFLGDYVDRGKQS-LETI-CLLLAYKIK---Y-PENFFLLRGNHECA 137 (293)
Q Consensus 91 ~~~~~~vfLGD~VDrG~~s-~evl-~ll~~lk~~---~-p~~v~~lrGNHE~~ 137 (293)
.+.+.+|++||++|.+... .+.+ ..+..++.. . +..++++.||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3457889999999987642 2222 222222221 1 34799999999974
No 63
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.80 E-value=0.0011 Score=58.47 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=107.2
Q ss_pred cCceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcc--cCCCCcHHHHHH-HHHhhhhcCCcEEEEcCCcccchhhh
Q 022679 65 EAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASINR 141 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~V--DrG~~s~evl~l-l~~lk~~~p~~v~~lrGNHE~~~~~~ 141 (293)
..++..+.|+||.++.+.++++.+.....+-+++.||+. +.|+.-...-.. +..++ ...-.++.++||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 357899999999999999999988766677888999999 888744332221 22322 34568999999998765432
Q ss_pred hccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCC-C-----ChHhhhcCCCCC-CCCCCchhhhhh
Q 022679 142 IYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL-S-----HLDQIRNLPRPT-AVPDTGLLCDLL 214 (293)
Q Consensus 142 ~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~-~-----~~~~i~~i~r~~-~~~~~~~~~dll 214 (293)
.. ...+..+. +-...+++-.+|-=||..|.. . +.++|....+.. +... ....=++
T Consensus 82 ~l-------~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-~~~~Il~ 143 (226)
T COG2129 82 VL-------KNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-NPVNILL 143 (226)
T ss_pred HH-------Hhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc-CcceEEE
Confidence 10 00111111 122233432233335655432 1 122222111100 0000 0000001
Q ss_pred hCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCCcc
Q 022679 215 WSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAGKN 282 (293)
Q Consensus 215 Wsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g~~ 282 (293)
.=-|+... ...++-| -.--|.++++++.++.+-.+.+.||=....|...- |..+++-.+..|..
T Consensus 144 ~HaPP~gt--~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~i-G~TivVNPG~~~~g 207 (226)
T COG2129 144 THAPPYGT--LLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKI-GNTIVVNPGPLGEG 207 (226)
T ss_pred ecCCCCCc--cccCCCC-ccccchHHHHHHHHHhCCceEEEeeeccccccccc-CCeEEECCCCccCc
Confidence 11111110 0012223 13458999999999999999999999998999773 44455544454433
No 64
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.77 E-value=0.0001 Score=67.20 Aligned_cols=69 Identities=19% Similarity=0.273 Sum_probs=45.0
Q ss_pred eeEEecCCCCHHHHHHHHHhc---CCCCCCeeeeeCCcccCCCCc-HHHH-------------HHHHHhhhhcCCcEEEE
Q 022679 68 MKICGDVHGQYSDLLRLFEYG---GYPPKANYLFLGDYVDRGKQS-LETI-------------CLLLAYKIKYPENFFLL 130 (293)
Q Consensus 68 i~viGDIHG~~~~L~~~l~~~---~~~~~~~~vfLGD~VDrG~~s-~evl-------------~ll~~lk~~~p~~v~~l 130 (293)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+.+ .++-. ....|-.+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEEE
Confidence 589999999999887654432 234567788999997544332 2222 11111 22356668999
Q ss_pred cCCcccc
Q 022679 131 RGNHECA 137 (293)
Q Consensus 131 rGNHE~~ 137 (293)
-||||..
T Consensus 80 ~GNHE~~ 86 (262)
T cd00844 80 GGNHEAS 86 (262)
T ss_pred CCCCCCH
Confidence 9999964
No 65
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.77 E-value=0.00015 Score=65.70 Aligned_cols=37 Identities=8% Similarity=-0.121 Sum_probs=28.1
Q ss_pred HHHHHHHcCCcEEEEeccccCCceeee--CCeEEEEEec
Q 022679 241 VSEFLKRHDLDLVCRAHQVVDFPTLSF--SIFFLFFWYR 277 (293)
Q Consensus 241 ~~~fl~~~~~~~iirgH~~~~~G~~~f--~~~~~~~~~~ 277 (293)
+.+.+++.++++++.||....++.+.. .|-..+++++
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h~~~~~~~~~~~ 228 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVHYAGHPYALITN 228 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeeeecCCceEEEeC
Confidence 778889999999999999998885543 5544455454
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.75 E-value=7.4e-05 Score=67.68 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=47.7
Q ss_pred ceeEEecCCC-C-----------HHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHH----HHHHHhhhhcCCcEEEE
Q 022679 67 PMKICGDVHG-Q-----------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 130 (293)
Q Consensus 67 ~i~viGDIHG-~-----------~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl----~ll~~lk~~~p~~v~~l 130 (293)
+++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..++...|-.++++
T Consensus 2 kilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~i 81 (253)
T TIGR00619 2 RILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVVI 81 (253)
T ss_pred EEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 6889999993 2 234555665554445677889999999886655433 33333432233579999
Q ss_pred cCCcccc
Q 022679 131 RGNHECA 137 (293)
Q Consensus 131 rGNHE~~ 137 (293)
.||||..
T Consensus 82 ~GNHD~~ 88 (253)
T TIGR00619 82 SGNHDSA 88 (253)
T ss_pred ccCCCCh
Confidence 9999975
No 67
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.70 E-value=0.00012 Score=62.24 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=34.6
Q ss_pred HHHHHHhcCCCCCCeeeeeCCcccCCCCcH-HHHHHH-HHhhhhcCCcEEEEcCCcccch
Q 022679 81 LLRLFEYGGYPPKANYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECAS 138 (293)
Q Consensus 81 L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~-evl~ll-~~lk~~~p~~v~~lrGNHE~~~ 138 (293)
+.++.+.+...+.+.+|++||+++....+. +....+ .......+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444445688999999998654332 212111 1112234568999999999753
No 68
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.66 E-value=0.00042 Score=62.61 Aligned_cols=73 Identities=19% Similarity=0.209 Sum_probs=52.2
Q ss_pred ceeEEecCCCC------HHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhh--hhcCCcEEEEcCCcccch
Q 022679 67 PMKICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYK--IKYPENFFLLRGNHECAS 138 (293)
Q Consensus 67 ~i~viGDIHG~------~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk--~~~p~~v~~lrGNHE~~~ 138 (293)
+++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|. .+-...+..+- ...+..+++++||||.+.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 57889999977 445666777777666688999999999963 22222322222 256778999999999886
Q ss_pred hhh
Q 022679 139 INR 141 (293)
Q Consensus 139 ~~~ 141 (293)
...
T Consensus 80 ~~~ 82 (301)
T COG1409 80 VNG 82 (301)
T ss_pred hHH
Confidence 653
No 69
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.66 E-value=0.0001 Score=69.64 Aligned_cols=71 Identities=23% Similarity=0.363 Sum_probs=48.0
Q ss_pred ceeEEecCC-C-----------CHHHHHHHHHhcCCCCCCeeeeeCCcccCC-CCcHHHHHHHHH--hhh--hcCCcEEE
Q 022679 67 PMKICGDVH-G-----------QYSDLLRLFEYGGYPPKANYLFLGDYVDRG-KQSLETICLLLA--YKI--KYPENFFL 129 (293)
Q Consensus 67 ~i~viGDIH-G-----------~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG-~~s~evl~ll~~--lk~--~~p~~v~~ 129 (293)
+++.+||+| | ....|.++++.+.-.+.+.+++.||++|+. +.+.+++.++.. ++. ..+-.+++
T Consensus 2 KilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~ 81 (340)
T PHA02546 2 KILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLHV 81 (340)
T ss_pred eEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 688999999 4 234556666555555567888999999985 445555444433 111 23557999
Q ss_pred EcCCcccc
Q 022679 130 LRGNHECA 137 (293)
Q Consensus 130 lrGNHE~~ 137 (293)
|.||||..
T Consensus 82 I~GNHD~~ 89 (340)
T PHA02546 82 LVGNHDMY 89 (340)
T ss_pred EccCCCcc
Confidence 99999974
No 70
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.59 E-value=0.00015 Score=63.33 Aligned_cols=74 Identities=23% Similarity=0.291 Sum_probs=49.5
Q ss_pred ceeEEecCC-CC--------------HHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhc---CCcEE
Q 022679 67 PMKICGDVH-GQ--------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFF 128 (293)
Q Consensus 67 ~i~viGDIH-G~--------------~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~---p~~v~ 128 (293)
+++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-... +..++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578899999 32 2236666666555556778899999998876555444433322222 45799
Q ss_pred EEcCCcccchhh
Q 022679 129 LLRGNHECASIN 140 (293)
Q Consensus 129 ~lrGNHE~~~~~ 140 (293)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999976543
No 71
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.53 E-value=0.00028 Score=62.85 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=44.2
Q ss_pred CceeEEecCC-CCHHH----------------HHHHHHhcCCCCCCeeeeeCCcccCCCCc---HHHHHHHHHhhhhcCC
Q 022679 66 APMKICGDVH-GQYSD----------------LLRLFEYGGYPPKANYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 125 (293)
Q Consensus 66 ~~i~viGDIH-G~~~~----------------L~~~l~~~~~~~~~~~vfLGD~VDrG~~s---~evl~ll~~lk~~~p~ 125 (293)
.++.||+|+| |.-.. |.++.+.+...+.+.+|++||+.+..... .++.+++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 64332 23333333334467899999999765542 2333333332 34
Q ss_pred cEEEEcCCcccch
Q 022679 126 NFFLLRGNHECAS 138 (293)
Q Consensus 126 ~v~~lrGNHE~~~ 138 (293)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.47 E-value=0.00028 Score=59.78 Aligned_cols=67 Identities=24% Similarity=0.313 Sum_probs=43.4
Q ss_pred eeEEecCCCCHHHH---------------HHHHHhcC--CCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEE
Q 022679 68 MKICGDVHGQYSDL---------------LRLFEYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 130 (293)
Q Consensus 68 i~viGDIHG~~~~L---------------~~~l~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~l 130 (293)
+++++|+|=....- .++++... ..+.+.++++||++++|..+.. +..+..+ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 36888888654432 22333221 2345789999999999986644 4444333 4579999
Q ss_pred cCCcccchh
Q 022679 131 RGNHECASI 139 (293)
Q Consensus 131 rGNHE~~~~ 139 (293)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 73
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.41 E-value=0.00025 Score=64.94 Aligned_cols=72 Identities=15% Similarity=0.122 Sum_probs=41.0
Q ss_pred CceeEEecCCC----CHHHHHHHHHhcCCCCCCeeeeeCCcccCCCC-cHHHHHHHHH-hh-hhcCCcEEEEcCCcccch
Q 022679 66 APMKICGDVHG----QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQ-SLETICLLLA-YK-IKYPENFFLLRGNHECAS 138 (293)
Q Consensus 66 ~~i~viGDIHG----~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~-s~evl~ll~~-lk-~~~p~~v~~lrGNHE~~~ 138 (293)
-+++|+||.|. ....+.++.+. ....+-++++||+++-+.. +.+..+..+. ++ +...-.++.++||||...
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 82 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEADY 82 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCccccccc
Confidence 46899999995 23333333333 2345668899999964432 2122222111 11 112346899999999864
Q ss_pred h
Q 022679 139 I 139 (293)
Q Consensus 139 ~ 139 (293)
.
T Consensus 83 ~ 83 (294)
T cd00839 83 N 83 (294)
T ss_pred C
Confidence 3
No 74
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.37 E-value=0.002 Score=53.80 Aligned_cols=119 Identities=21% Similarity=0.275 Sum_probs=80.2
Q ss_pred eEEecCCCCHHHHHHHHHhcCC--CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccch
Q 022679 69 KICGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFY 146 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 146 (293)
.|+||+||+++.+.+-++.+.. .+-+-++++||+..-....-+.-. ...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~-y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEA-YKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHH-HhcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877766322 245678899999986666534333 33334567888999999998
Q ss_pred hHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCCCCCCc
Q 022679 147 DECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWG 226 (293)
Q Consensus 147 ~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 226 (293)
+-.++++|.=+. ++...+++. .+
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKVP-------------------FE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCCc-------------------cc---------
Confidence 335888886221 111111100 00
Q ss_pred ccCCCceeeeChhHHHHHHHHcCCcEEEEecccc
Q 022679 227 MNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 260 (293)
Q Consensus 227 ~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~ 260 (293)
..+..-|...+++++++..-++.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 011235788999999999999999999865
No 75
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.36 E-value=0.00045 Score=66.83 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=45.2
Q ss_pred ceeEEecCC-CC-------HHH----HHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHH----HHHHHhhhhcCCcEEEE
Q 022679 67 PMKICGDVH-GQ-------YSD----LLRLFEYGGYPPKANYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFLL 130 (293)
Q Consensus 67 ~i~viGDIH-G~-------~~~----L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl----~ll~~lk~~~p~~v~~l 130 (293)
+++.++|+| |. ..+ |..+.+.+.....+.+|+.||++|++..+.+.. .++..++ ..+-.++++
T Consensus 2 kilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~-~~~~~v~~I 80 (407)
T PRK10966 2 RILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQ-QTGCQLVVL 80 (407)
T ss_pred EEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHH-hcCCcEEEE
Confidence 688899999 32 111 334444444456678889999999986554332 2333333 234569999
Q ss_pred cCCcccc
Q 022679 131 RGNHECA 137 (293)
Q Consensus 131 rGNHE~~ 137 (293)
.||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999975
No 76
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.27 E-value=0.00079 Score=65.03 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=55.7
Q ss_pred CceeEEecCCCC------------HHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhh-----------
Q 022679 66 APMKICGDVHGQ------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIK----------- 122 (293)
Q Consensus 66 ~~i~viGDIHG~------------~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~----------- 122 (293)
.+|.+++|+|-- +..|.++++.+.....+-+|+.||++|++.-|.+++..++..-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 478999999942 557788888876666777889999999999998887554443221
Q ss_pred -------------------------cCCcEEEEcCCcccch
Q 022679 123 -------------------------YPENFFLLRGNHECAS 138 (293)
Q Consensus 123 -------------------------~p~~v~~lrGNHE~~~ 138 (293)
..-.|++|-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1347999999999864
No 77
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.27 E-value=0.00075 Score=60.07 Aligned_cols=173 Identities=19% Similarity=0.225 Sum_probs=89.4
Q ss_pred eEEecCCCC------HHHHHHHHHhcCCCCCCeeeeeCCcccC--CCC-----cHHHHHHHHHhhhhcCCcEEEEcCCcc
Q 022679 69 KICGDVHGQ------YSDLLRLFEYGGYPPKANYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHE 135 (293)
Q Consensus 69 ~viGDIHG~------~~~L~~~l~~~~~~~~~~~vfLGD~VDr--G~~-----s~evl~ll~~lk~~~p~~v~~lrGNHE 135 (293)
+.|+|+|=. .+.|.+.++... +..+.+.++||++|- |.+ --+|...|..+ .+.+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368899854 344556666543 245678889999972 322 13344444443 346789999999999
Q ss_pred cchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEe---CCcEEeecCCCCCCCC-C-----------hHhhhcCCC
Q 022679 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALI---DEKILCMHGGLSPDLS-H-----------LDQIRNLPR 200 (293)
Q Consensus 136 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i---~~~~l~vHgGi~p~~~-~-----------~~~i~~i~r 200 (293)
...-+. ++ .+ .--+.-+|-...+ +.+++.+||-.--... . +.+..-+..
T Consensus 79 fll~~~-f~--~~-------------~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGKR-FA--QE-------------AGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHHH-HH--hh-------------cCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 543221 10 00 0012233333332 5689999995431110 0 000000111
Q ss_pred CCCCCCCchhhhhhhCCCCCCCCCCcccCCCce---eeeChhHHHHHHHHcCCcEEEEeccccCCceee
Q 022679 201 PTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVS---YTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLS 266 (293)
Q Consensus 201 ~~~~~~~~~~~dllWsdp~~~~~~~~~~~rG~~---~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 266 (293)
|.. -..-+..-+|+.- .|........ .-..+..+.+-++++|++.+|.||+..+..-..
T Consensus 143 ~l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i 204 (237)
T COG2908 143 PLR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNI 204 (237)
T ss_pred HHH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccC
Confidence 100 0001112244433 1222211111 123566788899999999999999998765433
No 78
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.93 E-value=0.02 Score=51.93 Aligned_cols=47 Identities=17% Similarity=0.043 Sum_probs=31.4
Q ss_pred hhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCCcccc
Q 022679 238 PDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAGKNVP 284 (293)
Q Consensus 238 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g~~~~ 284 (293)
...+.+++++.++++++-||.+...-+..-..+...+.++..|...+
T Consensus 190 ~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~~i~~G~~~~~~~ 236 (277)
T cd07378 190 VDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTSFVVSGAGSKARP 236 (277)
T ss_pred HHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcEEEEeCCCcccCC
Confidence 35677889999999999999987654444323445555555554433
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.88 E-value=0.0019 Score=57.80 Aligned_cols=68 Identities=18% Similarity=0.200 Sum_probs=38.8
Q ss_pred eEEecCC--CCH---HHHHHHHHhcC-CC----CCCeeeeeCCcccCCCC------------c----HHHHHHHHHhhhh
Q 022679 69 KICGDVH--GQY---SDLLRLFEYGG-YP----PKANYLFLGDYVDRGKQ------------S----LETICLLLAYKIK 122 (293)
Q Consensus 69 ~viGDIH--G~~---~~L~~~l~~~~-~~----~~~~~vfLGD~VDrG~~------------s----~evl~ll~~lk~~ 122 (293)
++++|+| +.. ..+..+++.+. .. ..+.+|++||++|+... . .++..++..+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 5799999 331 22233333322 21 23678899999997320 0 11223333332
Q ss_pred cCCcEEEEcCCcccch
Q 022679 123 YPENFFLLRGNHECAS 138 (293)
Q Consensus 123 ~p~~v~~lrGNHE~~~ 138 (293)
..-.++++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 3457999999999753
No 80
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.78 E-value=0.027 Score=51.18 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=24.4
Q ss_pred eChhHHHHHHHHcCCcEEEEeccccCCceee
Q 022679 236 FGPDKVSEFLKRHDLDLVCRAHQVVDFPTLS 266 (293)
Q Consensus 236 fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 266 (293)
-.++..+..|++.+-.+|+-||++ ++++.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~ 231 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEV 231 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--cccee
Confidence 478889999999999999999997 45544
No 81
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.64 E-value=0.0042 Score=52.89 Aligned_cols=49 Identities=22% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCCCCeeeeeCCcccCCCCcH--H---HHHHHHHhhh-hc----CCcEEEEcCCcccch
Q 022679 90 YPPKANYLFLGDYVDRGKQSL--E---TICLLLAYKI-KY----PENFFLLRGNHECAS 138 (293)
Q Consensus 90 ~~~~~~~vfLGD~VDrG~~s~--e---vl~ll~~lk~-~~----p~~v~~lrGNHE~~~ 138 (293)
..+.+.+|++||++|.+.... + .+..+..+.. .. +-.++.+.||||...
T Consensus 43 ~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 345678999999999887432 2 2222222211 11 456999999999864
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.61 E-value=0.0049 Score=56.86 Aligned_cols=72 Identities=22% Similarity=0.193 Sum_probs=48.2
Q ss_pred CceeEEecCCCCHHH--HHHHHHhcCCCCCCeeeeeCCcccC-CC-CcHHHHHHHHHhhhhcCCcEEEEcCCcccchh
Q 022679 66 APMKICGDVHGQYSD--LLRLFEYGGYPPKANYLFLGDYVDR-GK-QSLETICLLLAYKIKYPENFFLLRGNHECASI 139 (293)
Q Consensus 66 ~~i~viGDIHG~~~~--L~~~l~~~~~~~~~~~vfLGD~VDr-G~-~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 139 (293)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+ ....+...|..|+ .|-.++++.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 358899999987655 2233333332333778899999995 44 4445555565444 67789999999987543
No 83
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=96.59 E-value=0.00087 Score=64.87 Aligned_cols=114 Identities=17% Similarity=0.050 Sum_probs=96.5
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeec-Cc---eeEEecCCCCHHHHHHHHHhcCCCC-CCeeeeeCCcccCCCCcHHH
Q 022679 38 QLSESEIKQLCVASRDIFMRQPNLLELE-AP---MKICGDVHGQYSDLLRLFEYGGYPP-KANYLFLGDYVDRGKQSLET 112 (293)
Q Consensus 38 ~~~~~~~~~l~~~~~~~l~~ep~~~~~~-~~---i~viGDIHG~~~~L~~~l~~~~~~~-~~~~vfLGD~VDrG~~s~ev 112 (293)
.|...++..+++-+.+++..+|+..... .| .+.++|.||.+.|+..+++.- |. ..-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4667888899999999999999888764 23 788999999999998888763 32 34599999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhh
Q 022679 113 ICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF 153 (293)
Q Consensus 113 l~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~ 153 (293)
+..+...+...|+...+.|++||+..+-..++|..+....+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999999999998888888766655444
No 84
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.53 E-value=0.0049 Score=53.72 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=32.9
Q ss_pred CCCeeeeeCCcccCCCCc--HHHHHHHHHhhhhcC----CcEEEEcCCcccc
Q 022679 92 PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 137 (293)
Q Consensus 92 ~~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p----~~v~~lrGNHE~~ 137 (293)
..+-++|+||++|.|+.+ .+..+.+..++..++ -.++.|.||||--
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 467788999999999864 335555555543322 4689999999964
No 85
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.48 E-value=0.0079 Score=46.34 Aligned_cols=53 Identities=13% Similarity=0.323 Sum_probs=38.9
Q ss_pred cccCcCC-ccCChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 022679 4 TQGQQQG-TIMDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLEL 64 (293)
Q Consensus 4 ~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~ 64 (293)
-+|++.. ..++.+.+.++++.+...+ .|+...+..|+.++.++|+++|+++++
T Consensus 42 Y~GP~l~~~~it~efv~~mie~FK~~K--------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 42 YDGPRLEDEPITLEFVKAMIEWFKNQK--------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --SS--BTTB--HHHHHHHHHHHHCT------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 3688887 7788999999999998776 799999999999999999999999985
No 86
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.47 E-value=0.0091 Score=52.99 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=44.4
Q ss_pred cCceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcH-------------------------HHHHHHHHh
Q 022679 65 EAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSL-------------------------ETICLLLAY 119 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~-------------------------evl~ll~~l 119 (293)
..++..++|.||+++.+.++.+.+.-...+-++|+||++-....+. |.++-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 4579999999999999999988766556788999999986443332 223333333
Q ss_pred hhhcCCcEEEEcCCcccch
Q 022679 120 KIKYPENFFLLRGNHECAS 138 (293)
Q Consensus 120 k~~~p~~v~~lrGNHE~~~ 138 (293)
--..+-.+++|+||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 3345678999999999853
No 87
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.36 E-value=0.019 Score=48.03 Aligned_cols=68 Identities=18% Similarity=0.151 Sum_probs=42.1
Q ss_pred ceeEEecCCC------------CHHHHHHHH-HhcC--CCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEc
Q 022679 67 PMKICGDVHG------------QYSDLLRLF-EYGG--YPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 131 (293)
Q Consensus 67 ~i~viGDIHG------------~~~~L~~~l-~~~~--~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lr 131 (293)
.++.+||.|= +.+....++ .... ..|++.+.+|||+.-.-....+..+++-. -|++.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 3678888883 334443322 2111 23667788999998755544444444433 378899999
Q ss_pred CCcccch
Q 022679 132 GNHECAS 138 (293)
Q Consensus 132 GNHE~~~ 138 (293)
||||--.
T Consensus 81 GNhDk~~ 87 (186)
T COG4186 81 GNHDKCH 87 (186)
T ss_pred CCCCCCc
Confidence 9999653
No 88
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.35 E-value=0.0063 Score=54.48 Aligned_cols=66 Identities=26% Similarity=0.288 Sum_probs=43.3
Q ss_pred ceeEEecCCCCH---------HHHHHHHHhcCCC-CCCeeeeeCCcccCCCCcH-----HHHHHHHHhhhhcCCcEEEEc
Q 022679 67 PMKICGDVHGQY---------SDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 131 (293)
Q Consensus 67 ~i~viGDIHG~~---------~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s~-----evl~ll~~lk~~~p~~v~~lr 131 (293)
+++.++|+||.+ ..+..+++...-. ++.-++..||+++.++.+. .++..+..+ +..+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578899999886 5566666665433 3335567999999887643 455555443 2234 445
Q ss_pred CCcccc
Q 022679 132 GNHECA 137 (293)
Q Consensus 132 GNHE~~ 137 (293)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 89
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.18 E-value=0.02 Score=51.10 Aligned_cols=102 Identities=21% Similarity=0.247 Sum_probs=59.4
Q ss_pred ecCceeEEecCCCCHHHHH----------------HHHH-hcCCCCCCeeeeeCCcccCCCCc-----HHHHHHHHHhhh
Q 022679 64 LEAPMKICGDVHGQYSDLL----------------RLFE-YGGYPPKANYLFLGDYVDRGKQS-----LETICLLLAYKI 121 (293)
Q Consensus 64 ~~~~i~viGDIHG~~~~L~----------------~~l~-~~~~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~ 121 (293)
...+..|++|+|=-++... +.++ .+..-..+++|.+||+-.-.+.+ .++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996544322 2232 12223457899999999654432 334333333332
Q ss_pred hcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCC
Q 022679 122 KYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPD 188 (293)
Q Consensus 122 ~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~ 188 (293)
. .+++++||||...-....++. ...++.. .++ +++++||--.+.
T Consensus 98 -~--evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~-~i~-~~~~~HGh~~~~ 141 (235)
T COG1407 98 -R--EVIIIRGNHDNGIEEILPGFN------------------VEVVDEL-EIG-GLLFRHGHKEPE 141 (235)
T ss_pred -C--cEEEEeccCCCccccccccCC------------------ceeeeeE-Eec-CEEEEeCCCCCc
Confidence 2 599999999986544333331 1223333 234 599999965543
No 90
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.96 E-value=0.016 Score=50.50 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=41.9
Q ss_pred ecCCCCHHHHHHHHHhcCC-CCCCeeeeeCCcccCCCCcHHHH-HHHHHhhhhc---------------------CCcEE
Q 022679 72 GDVHGQYSDLLRLFEYGGY-PPKANYLFLGDYVDRGKQSLETI-CLLLAYKIKY---------------------PENFF 128 (293)
Q Consensus 72 GDIHG~~~~L~~~l~~~~~-~~~~~~vfLGD~VDrG~~s~evl-~ll~~lk~~~---------------------p~~v~ 128 (293)
=|++|+=.=|.+.++.+-+ -..+.++||||++|.|--+-+-+ .....++..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3556776667777776544 34577889999999885443322 2233332222 24578
Q ss_pred EEcCCcccc
Q 022679 129 LLRGNHECA 137 (293)
Q Consensus 129 ~lrGNHE~~ 137 (293)
.|.||||--
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999973
No 91
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.75 E-value=0.028 Score=53.89 Aligned_cols=72 Identities=21% Similarity=0.191 Sum_probs=50.9
Q ss_pred ceeEEecCCCC-------------HHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhh-c--CCcEEEE
Q 022679 67 PMKICGDVHGQ-------------YSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIK-Y--PENFFLL 130 (293)
Q Consensus 67 ~i~viGDIHG~-------------~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~-~--p~~v~~l 130 (293)
|+..++|.|=- +++|..+++.+.-...+-+|.-||+.|++.-|.+++..+...-.+ . .-.+++|
T Consensus 2 kilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~I 81 (390)
T COG0420 2 KILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVVI 81 (390)
T ss_pred eeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEEe
Confidence 56778888833 455666666655555677889999999998888776665543222 2 2479999
Q ss_pred cCCcccch
Q 022679 131 RGNHECAS 138 (293)
Q Consensus 131 rGNHE~~~ 138 (293)
.||||...
T Consensus 82 ~GNHD~~~ 89 (390)
T COG0420 82 AGNHDSPS 89 (390)
T ss_pred cCCCCchh
Confidence 99999764
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.33 E-value=0.024 Score=51.67 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=38.7
Q ss_pred ceeEEecCCCCH----------------HHHHHHHHhcCCCCCCeee-eeCCcccCCCCc-----------HHHHHHHHH
Q 022679 67 PMKICGDVHGQY----------------SDLLRLFEYGGYPPKANYL-FLGDYVDRGKQS-----------LETICLLLA 118 (293)
Q Consensus 67 ~i~viGDIHG~~----------------~~L~~~l~~~~~~~~~~~v-fLGD~VDrG~~s-----------~evl~ll~~ 118 (293)
+|+.++|+||.+ ..+..+++.......+.++ ..||+++..+.+ ..+++.+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 477899999986 3355555554332233333 379999866522 234555544
Q ss_pred hhhhcCCcEEEEcCCcccc
Q 022679 119 YKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 119 lk~~~p~~v~~lrGNHE~~ 137 (293)
+. . . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 42 2 3 4455999953
No 93
>PLN02533 probable purple acid phosphatase
Probab=95.14 E-value=0.025 Score=55.16 Aligned_cols=72 Identities=13% Similarity=0.080 Sum_probs=40.3
Q ss_pred cCceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHh-h-hhcCCcEEEEcCCcccch
Q 022679 65 EAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAY-K-IKYPENFFLLRGNHECAS 138 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~l-k-~~~p~~v~~lrGNHE~~~ 138 (293)
+-+++++||+|-. ......++.+.....+-++++||+++-+... ..++..+.+ + +...-.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~-~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQ-PLWDTFGRLVQPLASQRPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchH-HHHHHHHHHhhhHhhcCceEEeCccccccc
Confidence 3468999999632 2222344443334456788999999754332 122222111 0 111235889999999753
No 94
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.34 E-value=0.43 Score=39.75 Aligned_cols=116 Identities=22% Similarity=0.309 Sum_probs=79.6
Q ss_pred eeEEecCCC--CHHHHHHHHHhcCCCCC-CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhcc
Q 022679 68 MKICGDVHG--QYSDLLRLFEYGGYPPK-ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG 144 (293)
Q Consensus 68 i~viGDIHG--~~~~L~~~l~~~~~~~~-~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 144 (293)
+.++||+|= ...+|-.-|+++-.|+. +.++++|++. |.|++++|..+. ++++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc-------
Confidence 578999984 34455555665555544 6788999974 689999997764 5899999987653
Q ss_pred chhHHHHhhhHHHHHHHhhhhccCCceEE--eCC-cEEeecCCCCCCCCChHhhhcCCCCCCCCCCchhhhhhhCCCCCC
Q 022679 145 FYDECKRRFNVRLWKAFTDCFNCLPVAAL--IDE-KILCMHGGLSPDLSHLDQIRNLPRPTAVPDTGLLCDLLWSDPGRD 221 (293)
Q Consensus 145 f~~e~~~~~~~~~~~~~~~~~~~lP~~~~--i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 221 (293)
..-|..-+ ++. ++-|+||-.- +=|.||.
T Consensus 67 ---------------------~~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 67 ---------------------LKYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ---------------------ccCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 11122222 233 6889998421 1245553
Q ss_pred CCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceee
Q 022679 222 VKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLS 266 (293)
Q Consensus 222 ~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 266 (293)
.+.-..+..+++.++-||+..-+-|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 566677788999999999998888875
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.15 E-value=0.089 Score=47.51 Aligned_cols=66 Identities=20% Similarity=0.131 Sum_probs=40.1
Q ss_pred ceeEEecCCCCH----------HHHHHHHHhcCCCCCCeeeeeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEc
Q 022679 67 PMKICGDVHGQY----------SDLLRLFEYGGYPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLR 131 (293)
Q Consensus 67 ~i~viGDIHG~~----------~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lr 131 (293)
+++-++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..++..+-.+ +-.+. ..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~~-~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDAV-TP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcEE-cc
Confidence 467889999974 4455566554333445566799999876533 2334444333 22454 46
Q ss_pred CCcccc
Q 022679 132 GNHECA 137 (293)
Q Consensus 132 GNHE~~ 137 (293)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999953
No 96
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.02 E-value=0.55 Score=46.00 Aligned_cols=185 Identities=20% Similarity=0.196 Sum_probs=87.9
Q ss_pred ceeEEecCCC-CHHHHHHH----HHhcCCC----CCCeee-eeCCcccC-CC-----------CcHHHHHHHHHhhhhcC
Q 022679 67 PMKICGDVHG-QYSDLLRL----FEYGGYP----PKANYL-FLGDYVDR-GK-----------QSLETICLLLAYKIKYP 124 (293)
Q Consensus 67 ~i~viGDIHG-~~~~L~~~----l~~~~~~----~~~~~v-fLGD~VDr-G~-----------~s~evl~ll~~lk~~~p 124 (293)
.+..++|+|= ...-++.. ++-++-+ +..+|+ ..||.||. |- +..|-.+.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 3788999995 33333332 2222222 233555 67999993 21 22333444444444456
Q ss_pred C--cEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCC-cEEeecCCCCCCCCChHhhhcCCCC
Q 022679 125 E--NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRNLPRP 201 (293)
Q Consensus 125 ~--~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~ 201 (293)
. .+++.+||||..-.....-...+. ...++...+-.|-.=|....+++ .++..|| .+++++-..-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 5 488899999986544322222221 11222222222333455555554 5788898 356666543322
Q ss_pred CCC--CCCchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHcCCcEEEEeccccCCceeeeCCe
Q 022679 202 TAV--PDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIF 270 (293)
Q Consensus 202 ~~~--~~~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~ 270 (293)
.+. +..-+.+-|.|.-=.+...+-. ..+-|-++ -|.=.---++++.||++. .|+..+.|.
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~-----p~aP~~kD---~lVIeevPDv~~~Ghvh~-~g~~~y~gv 438 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTL-----PIAPETKD---YLVIEEVPDVFHTGHVHK-FGTGVYEGV 438 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCcc-----ccccCCcC---ceeeccCCcEEEEccccc-cceeEEecc
Confidence 211 1222233334443221111000 00001100 111112258899999987 588777774
No 97
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.57 E-value=0.085 Score=48.58 Aligned_cols=66 Identities=24% Similarity=0.273 Sum_probs=41.4
Q ss_pred ceeEEecCCCCHHH--------------HHHHHHhcCCC-CCCeeeeeCCcccCCCC-c-----HHHHHHHHHhhhhcCC
Q 022679 67 PMKICGDVHGQYSD--------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 125 (293)
Q Consensus 67 ~i~viGDIHG~~~~--------------L~~~l~~~~~~-~~~~~vfLGD~VDrG~~-s-----~evl~ll~~lk~~~p~ 125 (293)
+++.+.|+||++.. +..+++..... +..-++..||+++..+. + ..+++.+-++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 47789999998543 55666654432 33456679999987664 2 24556665553 2
Q ss_pred cEEEEcCCcccc
Q 022679 126 NFFLLRGNHECA 137 (293)
Q Consensus 126 ~v~~lrGNHE~~ 137 (293)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 34 455999964
No 98
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=92.68 E-value=0.11 Score=52.23 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=36.9
Q ss_pred CCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhh
Q 022679 93 KANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN 140 (293)
Q Consensus 93 ~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~ 140 (293)
.+++-.+||+.||||.+-.+++.|+... +|=+--||||-.++.
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMG 227 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMG 227 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHH
Confidence 4678889999999999999999998653 788999999976653
No 99
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.48 E-value=0.25 Score=47.67 Aligned_cols=56 Identities=25% Similarity=0.393 Sum_probs=35.6
Q ss_pred HHHHHHhcCCC-CCCeeeeeCCcccCCCCc--HHHHHHHHHhhhhcCC----cEEEEcCCccc
Q 022679 81 LLRLFEYGGYP-PKANYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 136 (293)
Q Consensus 81 L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s--~evl~ll~~lk~~~p~----~v~~lrGNHE~ 136 (293)
|.+.+...-+. ..+.++||||++|-|... -|--.....+|..++. +++.+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 34445444443 345677899999988643 3334444445555554 68999999995
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.31 E-value=0.23 Score=45.03 Aligned_cols=64 Identities=19% Similarity=0.150 Sum_probs=36.5
Q ss_pred eeEEecCCCCHH----------------------HHHHHHHhcCCC-CCCee-eeeCCcccCCCCc-----HHHHHHHHH
Q 022679 68 MKICGDVHGQYS----------------------DLLRLFEYGGYP-PKANY-LFLGDYVDRGKQS-----LETICLLLA 118 (293)
Q Consensus 68 i~viGDIHG~~~----------------------~L~~~l~~~~~~-~~~~~-vfLGD~VDrG~~s-----~evl~ll~~ 118 (293)
++.++|+||++. .+..+++..... ..+.+ +..||+++..+.+ ..++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 567788888743 344455544322 23333 4689999877643 234454444
Q ss_pred hhhhcCCcEEEEcCCcccc
Q 022679 119 YKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 119 lk~~~p~~v~~lrGNHE~~ 137 (293)
+ +-.+.. ||||..
T Consensus 83 ~----g~da~~--GNHefd 95 (264)
T cd07411 83 L----GVDAMV--GHWEFT 95 (264)
T ss_pred h----CCeEEe--cccccc
Confidence 3 223333 999964
No 101
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=91.55 E-value=0.37 Score=44.19 Aligned_cols=74 Identities=23% Similarity=0.270 Sum_probs=43.6
Q ss_pred ceeEEecCCCC--HHHHHHHHHhcCC--CCCCeeeeeCCcccCCCCcH--H------HHHHHHHhhhhcC-CcEEEEcCC
Q 022679 67 PMKICGDVHGQ--YSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGN 133 (293)
Q Consensus 67 ~i~viGDIHG~--~~~L~~~l~~~~~--~~~~~~vfLGD~VDrG~~s~--e------vl~ll~~lk~~~p-~~v~~lrGN 133 (293)
+..-.|+-.-+ ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+| -.++.+.||
T Consensus 39 ~~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 39 PAGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34445666422 3455666655443 35677889999998876431 1 1122222343344 369999999
Q ss_pred cccchhh
Q 022679 134 HECASIN 140 (293)
Q Consensus 134 HE~~~~~ 140 (293)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9986543
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=90.48 E-value=0.38 Score=52.78 Aligned_cols=65 Identities=18% Similarity=0.114 Sum_probs=40.0
Q ss_pred ceeEEecCCCCH---HHHHHHHHhcCCCCCCeee-eeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEcCCccc
Q 022679 67 PMKICGDVHGQY---SDLLRLFEYGGYPPKANYL-FLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 136 (293)
Q Consensus 67 ~i~viGDIHG~~---~~L~~~l~~~~~~~~~~~v-fLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lrGNHE~ 136 (293)
+|+.++|+||.+ ..+..+++...-...+.++ ..||+++..+.+ ..+++.+-.+. --+...||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 478899999885 4444455543322233343 489999977644 24555554442 23558999996
No 103
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=89.95 E-value=0.7 Score=42.32 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=37.7
Q ss_pred ceeEEecCCCCH---------------------HHHHHHHHhcCCC-CCCeeeeeCCcccCCCC-----cHHHHHHHHHh
Q 022679 67 PMKICGDVHGQY---------------------SDLLRLFEYGGYP-PKANYLFLGDYVDRGKQ-----SLETICLLLAY 119 (293)
Q Consensus 67 ~i~viGDIHG~~---------------------~~L~~~l~~~~~~-~~~~~vfLGD~VDrG~~-----s~evl~ll~~l 119 (293)
+++-++|+||++ ..+..+++..... ++.-++..||+++..+. ...+++.+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 367789999875 3444455544322 23334458999987653 23344444433
Q ss_pred hhhcCCcEEEEcCCcccc
Q 022679 120 KIKYPENFFLLRGNHECA 137 (293)
Q Consensus 120 k~~~p~~v~~lrGNHE~~ 137 (293)
. -.+.. .||||.-
T Consensus 82 g----~D~~~-lGNHefd 94 (281)
T cd07409 82 G----YDAMT-LGNHEFD 94 (281)
T ss_pred C----CCEEE-ecccccc
Confidence 2 24444 4999964
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=89.55 E-value=0.92 Score=42.99 Aligned_cols=73 Identities=23% Similarity=0.369 Sum_probs=46.1
Q ss_pred CceeEEecCCCCHHHHHHH---HHhcCCCCCCeeeeeCCccc-CCC---CcHHH---HHHHH------HhhhhcCCcEEE
Q 022679 66 APMKICGDVHGQYSDLLRL---FEYGGYPPKANYLFLGDYVD-RGK---QSLET---ICLLL------AYKIKYPENFFL 129 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~---l~~~~~~~~~~~vfLGD~VD-rG~---~s~ev---l~ll~------~lk~~~p~~v~~ 129 (293)
.||.|-|=-||.++.+-+- .++.|-.+.+-+++.||+=. |.. +++.| +..+. +=....|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 3788999999999988744 44555556778889999853 211 11111 11111 112235666789
Q ss_pred EcCCcccch
Q 022679 130 LRGNHECAS 138 (293)
Q Consensus 130 lrGNHE~~~ 138 (293)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999864
No 105
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=89.54 E-value=0.81 Score=39.44 Aligned_cols=71 Identities=20% Similarity=0.254 Sum_probs=42.3
Q ss_pred CCCCeeeeeCCcc--cCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhhhHHHHHHHhhhhccC
Q 022679 91 PPKANYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCL 168 (293)
Q Consensus 91 ~~~~~~vfLGD~V--DrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~l 168 (293)
.+++.++.-||+- -|=++..+=+.++-+| |+.=+++|||||...-.. ......+... ....++.|+.+
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s~-----skl~n~lp~~-l~~~n~~f~l~ 111 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSSI-----SKLNNALPPI-LFYLNNGFELL 111 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccchH-----HHHHhhcCch-HhhhccceeEe
Confidence 3456666779985 3455556666666554 889999999999875421 1111222222 33456677766
Q ss_pred Cce
Q 022679 169 PVA 171 (293)
Q Consensus 169 P~~ 171 (293)
-.+
T Consensus 112 n~a 114 (230)
T COG1768 112 NYA 114 (230)
T ss_pred eEE
Confidence 643
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.25 E-value=0.76 Score=41.48 Aligned_cols=56 Identities=21% Similarity=0.124 Sum_probs=35.3
Q ss_pred CCHHHHHHHHHhcCCCCCC-eeeeeCCcccCCCC-----cHHHHHHHHHhhhhcCCcEEEEcCCccc
Q 022679 76 GQYSDLLRLFEYGGYPPKA-NYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPENFFLLRGNHEC 136 (293)
Q Consensus 76 G~~~~L~~~l~~~~~~~~~-~~vfLGD~VDrG~~-----s~evl~ll~~lk~~~p~~v~~lrGNHE~ 136 (293)
|.+..+..+++...-...+ -++..||+++.++. ...++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4467777777765433333 45568999987753 245566655543 23557899996
No 107
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.54 E-value=0.97 Score=39.16 Aligned_cols=72 Identities=11% Similarity=0.104 Sum_probs=40.8
Q ss_pred eeEEecCCCC-----HHHHHHHHHhcC-CCCCCeeeeeCCcccCCCCcHH----------HHHHHHHhhh-----hcCCc
Q 022679 68 MKICGDVHGQ-----YSDLLRLFEYGG-YPPKANYLFLGDYVDRGKQSLE----------TICLLLAYKI-----KYPEN 126 (293)
Q Consensus 68 i~viGDIHG~-----~~~L~~~l~~~~-~~~~~~~vfLGD~VDrG~~s~e----------vl~ll~~lk~-----~~p~~ 126 (293)
|++++|+|=. ++.|.++|+.+. ..+.+.+|++|+++|.-....+ ....+..+.. ..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777755 677888888777 5666789999999996322211 1111111111 12358
Q ss_pred EEEEcCCcccchh
Q 022679 127 FFLLRGNHECASI 139 (293)
Q Consensus 127 v~~lrGNHE~~~~ 139 (293)
++++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 108
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.34 E-value=1.3 Score=43.13 Aligned_cols=69 Identities=22% Similarity=0.397 Sum_probs=54.0
Q ss_pred cCceeEEecCCCCHHHHHHHHHhcCCC--CCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCc
Q 022679 65 EAPMKICGDVHGQYSDLLRLFEYGGYP--PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 134 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~L~~~l~~~~~~--~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 134 (293)
+.+|.||||+-|+++.|.+-.+..... |-+-++++|++.+-..++-|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 478999999999999998777665432 4567889999999877888888877654 35787888887765
No 109
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=86.88 E-value=6.3 Score=34.14 Aligned_cols=85 Identities=15% Similarity=0.234 Sum_probs=64.1
Q ss_pred CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchh----------------HHHHhhhHHH
Q 022679 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYD----------------ECKRRFNVRL 157 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 157 (293)
..+||+| .|-+.-|++.++-.++.+|..+.++ .|+-|.|..++...|.. |..+.|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4588888 4888999999999999888877665 89999998887655532 2222333456
Q ss_pred HHHHhhhhccCCceEEeCCcEEeecC
Q 022679 158 WKAFTDCFNCLPVAALIDEKILCMHG 183 (293)
Q Consensus 158 ~~~~~~~~~~lP~~~~i~~~~l~vHg 183 (293)
|..+...+.++++...+-..++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 66777778888888888888888877
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=86.28 E-value=0.97 Score=41.54 Aligned_cols=66 Identities=17% Similarity=0.049 Sum_probs=36.3
Q ss_pred ceeEEecCCCCHHH----------HHHHHHhcCC-----CCCCeeeeeCCcccCCCC-----cHHHHHHHHHhhhhcCCc
Q 022679 67 PMKICGDVHGQYSD----------LLRLFEYGGY-----PPKANYLFLGDYVDRGKQ-----SLETICLLLAYKIKYPEN 126 (293)
Q Consensus 67 ~i~viGDIHG~~~~----------L~~~l~~~~~-----~~~~~~vfLGD~VDrG~~-----s~evl~ll~~lk~~~p~~ 126 (293)
.|+-+.|+||++.. +..+++.... .++.-++-.||.+...+. ...+++++-.+. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 36778999998533 3344433221 233334458999853332 233445554443 24
Q ss_pred EEEEcCCcccc
Q 022679 127 FFLLRGNHECA 137 (293)
Q Consensus 127 v~~lrGNHE~~ 137 (293)
+..+ ||||.-
T Consensus 78 a~~~-GNHEfD 87 (285)
T cd07405 78 AMAV-GNHEFD 87 (285)
T ss_pred EEee-cccccc
Confidence 5544 999964
No 111
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=86.02 E-value=1.8 Score=39.59 Aligned_cols=66 Identities=18% Similarity=0.152 Sum_probs=47.2
Q ss_pred ceeEEecCCCC--HHHHHHHHHhcCCCC-CCeeeeeCCcccCC-CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 67 PMKICGDVHGQ--YSDLLRLFEYGGYPP-KANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 67 ~i~viGDIHG~--~~~L~~~l~~~~~~~-~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
++.++|||=|. ...+.+.|..+.... .+-+|..||....| .-+.++.+.|..+ +-.++.+ |||+.-
T Consensus 2 ~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 2 KFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 68999999999 566677776655433 34455689999766 4567788888755 3466666 999864
No 112
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=85.36 E-value=1.9 Score=40.64 Aligned_cols=49 Identities=18% Similarity=0.149 Sum_probs=32.7
Q ss_pred CCCCeeeeeCCcccCCC--CcHHHHHHHHHhhhhcCCcEEEEcCCcccchh
Q 022679 91 PPKANYLFLGDYVDRGK--QSLETICLLLAYKIKYPENFFLLRGNHECASI 139 (293)
Q Consensus 91 ~~~~~~vfLGD~VDrG~--~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 139 (293)
...+-+||+||.|+.-. +...++....+-.+.+.-....+.||||+...
T Consensus 99 E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ 149 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDESD 149 (379)
T ss_pred cCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEecccccccc
Confidence 45678899999999521 23344444444444566678999999997643
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=83.89 E-value=1.5 Score=40.37 Aligned_cols=66 Identities=18% Similarity=0.089 Sum_probs=37.2
Q ss_pred ceeEEecCCCCHHH-------------HHHH---HHh-cCC-CCCCeeeeeCCcccCCCCc-------HHHHHHHHHhhh
Q 022679 67 PMKICGDVHGQYSD-------------LLRL---FEY-GGY-PPKANYLFLGDYVDRGKQS-------LETICLLLAYKI 121 (293)
Q Consensus 67 ~i~viGDIHG~~~~-------------L~~~---l~~-~~~-~~~~~~vfLGD~VDrG~~s-------~evl~ll~~lk~ 121 (293)
.|+-+.|+||++.. +.++ ++. ... .++.-++..||.++.-+.+ ..+++++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 46778999998641 2222 221 111 2233345589999865432 23455554443
Q ss_pred hcCCcEEEEcCCcccc
Q 022679 122 KYPENFFLLRGNHECA 137 (293)
Q Consensus 122 ~~p~~v~~lrGNHE~~ 137 (293)
-=.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 345778999984
No 114
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=83.75 E-value=1.5 Score=43.76 Aligned_cols=68 Identities=24% Similarity=0.220 Sum_probs=41.5
Q ss_pred CceeEEecCCCCHH------------HHHHH---HHhcCCC-CCCeeeeeCCcccCCC------CcHHHHHHHHHhhhhc
Q 022679 66 APMKICGDVHGQYS------------DLLRL---FEYGGYP-PKANYLFLGDYVDRGK------QSLETICLLLAYKIKY 123 (293)
Q Consensus 66 ~~i~viGDIHG~~~------------~L~~~---l~~~~~~-~~~~~vfLGD~VDrG~------~s~evl~ll~~lk~~~ 123 (293)
-+|+-..|+||++. -+.++ .+...-. ++.-+|=.||+++..+ .....+.++-.++
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~--- 103 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG--- 103 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC---
Confidence 35788899999998 33333 3322222 2233444899999843 3345667776665
Q ss_pred CCcEEEEcCCcccch
Q 022679 124 PENFFLLRGNHECAS 138 (293)
Q Consensus 124 p~~v~~lrGNHE~~~ 138 (293)
-=....||||.-.
T Consensus 104 --yDa~tiGNHEFd~ 116 (517)
T COG0737 104 --YDAMTLGNHEFDY 116 (517)
T ss_pred --CcEEeeccccccc
Confidence 2256779999753
No 115
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=83.31 E-value=3.2 Score=37.66 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=43.6
Q ss_pred ceeEEecCCCCH--HHHHHHHHhcCCC-CCCeeeeeCCcccCC-CCcHHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 67 PMKICGDVHGQY--SDLLRLFEYGGYP-PKANYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 67 ~i~viGDIHG~~--~~L~~~l~~~~~~-~~~~~vfLGD~VDrG-~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
++.++|||=|.. ..+...+...... +.+-++-.||..--| .-+.++...|..+. -.++.+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 578999999984 3345555544322 234455589998766 46778888887663 356655 999854
No 116
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=81.70 E-value=1 Score=43.99 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=34.5
Q ss_pred CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchh
Q 022679 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 139 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~ 139 (293)
+.+-.+||+-||||++-.+++-|..+. .+-+--||||-.++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 556689999999999999999998763 67788999996655
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=81.31 E-value=2.7 Score=39.28 Aligned_cols=65 Identities=20% Similarity=0.059 Sum_probs=38.8
Q ss_pred eeEEecCCCCHH------HHHHHHHhcCC-----CCCCeeeeeCCcccCCCC-------------cHHHHHHHHHhhhhc
Q 022679 68 MKICGDVHGQYS------DLLRLFEYGGY-----PPKANYLFLGDYVDRGKQ-------------SLETICLLLAYKIKY 123 (293)
Q Consensus 68 i~viGDIHG~~~------~L~~~l~~~~~-----~~~~~~vfLGD~VDrG~~-------------s~evl~ll~~lk~~~ 123 (293)
|+-+.|+||++. .+..+++.... .++.-++..||.+..++. ...+++++-.+.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 566889999953 33333433211 233445568999976543 345566665554
Q ss_pred CCcEEEEcCCcccc
Q 022679 124 PENFFLLRGNHECA 137 (293)
Q Consensus 124 p~~v~~lrGNHE~~ 137 (293)
-=.+..||||.-
T Consensus 80 --~Da~tlGNHEFD 91 (313)
T cd08162 80 --VQAIALGNHEFD 91 (313)
T ss_pred --CcEEeccccccc
Confidence 235679999953
No 118
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=80.31 E-value=2 Score=41.95 Aligned_cols=31 Identities=10% Similarity=-0.037 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCcEEEEeccccCCceeeeCCe
Q 022679 240 KVSEFLKRHDLDLVCRAHQVVDFPTLSFSIF 270 (293)
Q Consensus 240 ~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~ 270 (293)
.++..+-++++++++-||...-+....-.+.
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~ 353 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNN 353 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhcc
Confidence 5899999999999999999987776554443
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=80.02 E-value=2.6 Score=43.39 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=41.7
Q ss_pred cCceeEEecCCCCHHH----------------HHHHHHhcCC-CCCCeeeeeCCcccCCCCcH-------------HHHH
Q 022679 65 EAPMKICGDVHGQYSD----------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQSL-------------ETIC 114 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~----------------L~~~l~~~~~-~~~~~~vfLGD~VDrG~~s~-------------evl~ 114 (293)
.-+|+-..|+||++.. +..+++.... .++.-+|-.||++...+.+- .++.
T Consensus 25 ~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~ 104 (649)
T PRK09420 25 DLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYK 104 (649)
T ss_pred eEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHH
Confidence 4568889999999743 2333333321 13444556999998665431 3566
Q ss_pred HHHHhhhhcCCcEEEEcCCcccc
Q 022679 115 LLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 115 ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
.+-.+. -=....||||.-
T Consensus 105 amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 105 AMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHhcC-----CcEEeccchhhh
Confidence 665554 346778999953
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=79.08 E-value=2.8 Score=42.99 Aligned_cols=66 Identities=17% Similarity=0.073 Sum_probs=39.3
Q ss_pred ceeEEecCCCCHHH----------------HHHHHHhcCCC-CCCeeeeeCCcccCCCCc-------------HHHHHHH
Q 022679 67 PMKICGDVHGQYSD----------------LLRLFEYGGYP-PKANYLFLGDYVDRGKQS-------------LETICLL 116 (293)
Q Consensus 67 ~i~viGDIHG~~~~----------------L~~~l~~~~~~-~~~~~vfLGD~VDrG~~s-------------~evl~ll 116 (293)
+|+-..|+||++.. +..+++..... ++.-+|-.||.+...+.+ ..++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 57778999999743 33344333211 234455689999865433 2345555
Q ss_pred HHhhhhcCCcEEEEcCCcccc
Q 022679 117 LAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 117 ~~lk~~~p~~v~~lrGNHE~~ 137 (293)
-.|. -=....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 5553 235678999953
No 121
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=78.69 E-value=2.7 Score=46.22 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=17.4
Q ss_pred hhHHHHHHHH-cCCcEEEEeccccC
Q 022679 238 PDKVSEFLKR-HDLDLVCRAHQVVD 261 (293)
Q Consensus 238 ~~~~~~fl~~-~~~~~iirgH~~~~ 261 (293)
+++..+..++ .|++.||-||++..
T Consensus 256 en~~~~la~~~~gID~Il~GHsH~~ 280 (1163)
T PRK09419 256 EDSVYDLAEKTKGIDAIVAGHQHGL 280 (1163)
T ss_pred chHHHHHHHhCCCCcEEEeCCCccc
Confidence 3455566644 58999999998764
No 122
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=78.30 E-value=7.4 Score=36.00 Aligned_cols=72 Identities=15% Similarity=0.240 Sum_probs=48.4
Q ss_pred CceeEEecCCCC----HHHHHHHHHhcC-CCC----CCeeeeeCCcccCC----CCc----HHHHHHHHHh-hhhcC---
Q 022679 66 APMKICGDVHGQ----YSDLLRLFEYGG-YPP----KANYLFLGDYVDRG----KQS----LETICLLLAY-KIKYP--- 124 (293)
Q Consensus 66 ~~i~viGDIHG~----~~~L~~~l~~~~-~~~----~~~~vfLGD~VDrG----~~s----~evl~ll~~l-k~~~p--- 124 (293)
..++|+||+|=+ ++.|.++|+... ..+ ..-+||+|+++.+. ..+ .+-++-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 458899999954 788888888763 212 35688999999763 222 2444545432 22344
Q ss_pred --CcEEEEcCCcccc
Q 022679 125 --ENFFLLRGNHECA 137 (293)
Q Consensus 125 --~~v~~lrGNHE~~ 137 (293)
.++++|.|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 7899999999964
No 123
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=75.16 E-value=5.3 Score=38.58 Aligned_cols=71 Identities=10% Similarity=0.024 Sum_probs=41.3
Q ss_pred ceeEEecCCCCHHHHHH---HHHhc-CCCCCCeeeeeCCcccCCCCcH------HHHHHHHHhhh-hcCCcEEEEcCCcc
Q 022679 67 PMKICGDVHGQYSDLLR---LFEYG-GYPPKANYLFLGDYVDRGKQSL------ETICLLLAYKI-KYPENFFLLRGNHE 135 (293)
Q Consensus 67 ~i~viGDIHG~~~~L~~---~l~~~-~~~~~~~~vfLGD~VDrG~~s~------evl~ll~~lk~-~~p~~v~~lrGNHE 135 (293)
+++++||-=+-...-.. .+... ...+.+-+|-+||-++.|..++ +.++-++.-+. .-.-.++++.||||
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNHD 107 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQAD 107 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCccc
Confidence 68999995432222222 22222 2234566778999998887653 34455543221 01237999999999
Q ss_pred cc
Q 022679 136 CA 137 (293)
Q Consensus 136 ~~ 137 (293)
..
T Consensus 108 y~ 109 (394)
T PTZ00422 108 WD 109 (394)
T ss_pred cc
Confidence 63
No 124
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=74.88 E-value=4 Score=41.11 Aligned_cols=66 Identities=18% Similarity=0.071 Sum_probs=36.6
Q ss_pred ceeEEecCCCCHHH----------HHHHHHhcC-----CCCCCeeeeeCCcccCCCCc-----HHHHHHHHHhhhhcCCc
Q 022679 67 PMKICGDVHGQYSD----------LLRLFEYGG-----YPPKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPEN 126 (293)
Q Consensus 67 ~i~viGDIHG~~~~----------L~~~l~~~~-----~~~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~ 126 (293)
.|+-+.|+||++.. +..+++... ..++.-++.-||.+...+.+ ..+++++-.+. -.
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~D 111 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YD 111 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CC
Confidence 47788999998742 223333221 12334455689998643322 23344444442 34
Q ss_pred EEEEcCCcccc
Q 022679 127 FFLLRGNHECA 137 (293)
Q Consensus 127 v~~lrGNHE~~ 137 (293)
+..+ ||||.-
T Consensus 112 a~tl-GNHEFD 121 (551)
T PRK09558 112 AMAV-GNHEFD 121 (551)
T ss_pred EEcc-cccccC
Confidence 5554 999964
No 125
>PF14164 YqzH: YqzH-like protein
Probab=74.70 E-value=12 Score=26.51 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=36.9
Q ss_pred CChhhHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 022679 13 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPN 60 (293)
Q Consensus 13 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~ 60 (293)
|++..++++|.+-++.- +....-.+++++|...|+..+.+.-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QY-g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQY-GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 56777888887777664 223345589999999999999999999986
No 126
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=72.45 E-value=5.9 Score=41.90 Aligned_cols=67 Identities=19% Similarity=0.091 Sum_probs=39.9
Q ss_pred CceeEEecCCCCHHHH----------------HHHHHhcCC-CCCCeeeeeCCcccCCCCc--------------HHHHH
Q 022679 66 APMKICGDVHGQYSDL----------------LRLFEYGGY-PPKANYLFLGDYVDRGKQS--------------LETIC 114 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L----------------~~~l~~~~~-~~~~~~vfLGD~VDrG~~s--------------~evl~ 114 (293)
-+|+-..|+||++... ..+++.... .++.-+|-.||++..-+.+ ..++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 3578899999996432 223333211 1334455689999865432 13566
Q ss_pred HHHHhhhhcCCcEEEEcCCcccc
Q 022679 115 LLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 115 ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
.+-.|. -=....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 666554 235778999953
No 127
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=68.50 E-value=15 Score=33.37 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=46.1
Q ss_pred CeeeeeCCcccCCCCc------------------HHHHHHHHHhhhh--cCCcEEEEcCCcccchhhhhcc-chhHHHHh
Q 022679 94 ANYLFLGDYVDRGKQS------------------LETICLLLAYKIK--YPENFFLLRGNHECASINRIYG-FYDECKRR 152 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s------------------~evl~ll~~lk~~--~p~~v~~lrGNHE~~~~~~~~~-f~~e~~~~ 152 (293)
.++|..||.|+.-... .+-+..+-.+-.+ .--.|.++.||||-.....-.. +...+..+
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~ 123 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPK 123 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhc
Confidence 3688999999954321 2222222222111 2236889999999765543221 11111000
Q ss_pred hhHHHHHHHhhhhccCCceEEeCC-cEEeecCCCCCCCCChHhhhc
Q 022679 153 FNVRLWKAFTDCFNCLPVAALIDE-KILCMHGGLSPDLSHLDQIRN 197 (293)
Q Consensus 153 ~~~~~~~~~~~~~~~lP~~~~i~~-~~l~vHgGi~p~~~~~~~i~~ 197 (293)
. ..+. .=-+-+=|....+++ +++.+||- +++++.+
T Consensus 124 -s-~~~~--~~~~vtNP~~~~i~g~~vLgtsGq------ni~Di~k 159 (257)
T cd07387 124 -S-SNYS--TLNLVTNPYEFSIDGVRVLGTSGQ------NVDDILK 159 (257)
T ss_pred -c-cccC--CcEEeCCCeEEEECCEEEEEECCC------CHHHHHH
Confidence 0 0000 011234466666666 57788873 4555543
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=66.81 E-value=12 Score=37.73 Aligned_cols=41 Identities=27% Similarity=0.149 Sum_probs=25.2
Q ss_pred CCCeeeeeCCcccCCCCc-----HHHHHHHHHhhhhcCCcEEEEcCCcccc
Q 022679 92 PKANYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 137 (293)
Q Consensus 92 ~~~~~vfLGD~VDrG~~s-----~evl~ll~~lk~~~p~~v~~lrGNHE~~ 137 (293)
++.-++..||.+...+.+ ...++++-.+. -=....||||.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG-----FDFFTLGNHEFD 94 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccC-----CCEEEecccccc
Confidence 344556789999765432 33455554443 346788999964
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=65.69 E-value=8.6 Score=35.34 Aligned_cols=66 Identities=24% Similarity=0.241 Sum_probs=41.6
Q ss_pred CceeEEecCCCCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcC-CcEEEEcCCcccchh
Q 022679 66 APMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECASI 139 (293)
Q Consensus 66 ~~i~viGDIHG~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p-~~v~~lrGNHE~~~~ 139 (293)
.+++.|+|.|+...+.. ..++.+.++-+||+-.-|. +-||..+=..+ ...| ..=+.|+||||.-.-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceeec
Confidence 36899999999765443 3455666788999977553 34444332211 1233 245789999997654
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=59.78 E-value=14 Score=39.00 Aligned_cols=67 Identities=16% Similarity=0.087 Sum_probs=39.2
Q ss_pred cCceeEEecCCCCHHH----------------HHHHHHhcCC-CCCCeeeeeCCcccCCCCc------------------
Q 022679 65 EAPMKICGDVHGQYSD----------------LLRLFEYGGY-PPKANYLFLGDYVDRGKQS------------------ 109 (293)
Q Consensus 65 ~~~i~viGDIHG~~~~----------------L~~~l~~~~~-~~~~~~vfLGD~VDrG~~s------------------ 109 (293)
.-+|+-..|+||++.. +..+++.... .++.-+|-.||++...+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3468889999999632 2223333211 1334455689998543321
Q ss_pred -HHHHHHHHHhhhhcCCcEEEEcCCccc
Q 022679 110 -LETICLLLAYKIKYPENFFLLRGNHEC 136 (293)
Q Consensus 110 -~evl~ll~~lk~~~p~~v~~lrGNHE~ 136 (293)
..+++++-.|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23556665554 23567899995
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=56.84 E-value=38 Score=34.14 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=38.5
Q ss_pred CceeEEecCCC------------CHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHH
Q 022679 66 APMKICGDVHG------------QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLL 117 (293)
Q Consensus 66 ~~i~viGDIHG------------~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~ 117 (293)
-+|.|-.|.|= .+..|+++|+.+.-...+-++.-||++.-..-|..+|-..+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i 77 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCL 77 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHH
Confidence 47888999883 37889999988765555666678999988877776654433
No 132
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=53.98 E-value=1.4e+02 Score=25.59 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=60.4
Q ss_pred cccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCCC-----------------------
Q 022679 36 QVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPP----------------------- 92 (293)
Q Consensus 36 ~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~~----------------------- 92 (293)
.+.++++++.+-+.+..+.+.++-.= ...++||=++|++--+-.++..+.++.
T Consensus 9 evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~ 84 (178)
T COG0634 9 EVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKIL 84 (178)
T ss_pred eEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEe
Confidence 45689999999888888888776432 578899999999987778877665532
Q ss_pred --------CCeeeeeCCcccCCCCcHHHHHHHHH
Q 022679 93 --------KANYLFLGDYVDRGKQSLETICLLLA 118 (293)
Q Consensus 93 --------~~~~vfLGD~VDrG~~s~evl~ll~~ 118 (293)
..+++.+=|++|-|..=..+.++|..
T Consensus 85 kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~ 118 (178)
T COG0634 85 KDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKE 118 (178)
T ss_pred cccccCCCCCeEEEEecccccChhHHHHHHHHHh
Confidence 24688899999988877777666643
No 133
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=53.24 E-value=72 Score=26.72 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=60.6
Q ss_pred eEEecCCCCHHHHHHHHH-hcCC------------CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcc
Q 022679 69 KICGDVHGQYSDLLRLFE-YGGY------------PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 135 (293)
Q Consensus 69 ~viGDIHG~~~~L~~~l~-~~~~------------~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE 135 (293)
++.+=.+||-..+.+.+. .++- ..+-++||+|--+|+|.-+-++..+|-.++ +.+|++.- -.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF~-T~- 76 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALFG-TA- 76 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEEE-ec-
Confidence 456667888877765543 3332 134579999999999999999999998764 44554432 11
Q ss_pred cchhhhhccchhHHHHhhhHHHHHHHhhhhccCCceEEeCCcEEeecCCCCCCC
Q 022679 136 CASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDL 189 (293)
Q Consensus 136 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~l~vHgGi~p~~ 189 (293)
|+.. ...|...+.+....++..= ..+-+ .|+|+|-++|.+
T Consensus 77 --------G~~~--~s~~~~~~~~~~~~~~~~~---~~~lg-~f~CqGk~~~~~ 116 (160)
T PF12641_consen 77 --------GAGP--DSEYAKKILKNVEALLPKG---NEILG-TFMCQGKMDPKV 116 (160)
T ss_pred --------CCCC--chHHHHHHHHHHHHhhccC---Ceecc-eEEeCCcCCHHH
Confidence 1111 1222333334444433322 22222 688899999865
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=52.31 E-value=47 Score=24.42 Aligned_cols=72 Identities=13% Similarity=0.032 Sum_probs=46.2
Q ss_pred eecCceeEEecCCCCHHHHHHHHHhcCC--CCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCc
Q 022679 63 ELEAPMKICGDVHGQYSDLLRLFEYGGY--PPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 134 (293)
Q Consensus 63 ~~~~~i~viGDIHG~~~~L~~~l~~~~~--~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNH 134 (293)
.....+.|+=|---|.+.+..+++.+.. +....++.+|+.-|.|....+....+-.+...+...+++...|+
T Consensus 9 ~~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 9 REPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EEETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eeCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 3334677888877788888888877632 34556678999999888877766666555555566655555544
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=48.56 E-value=18 Score=36.86 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=30.7
Q ss_pred ChhHHHHHHHHcCCc----EEEEeccccC--Cceeee--CCeEEEEEe
Q 022679 237 GPDKVSEFLKRHDLD----LVCRAHQVVD--FPTLSF--SIFFLFFWY 276 (293)
Q Consensus 237 G~~~~~~fl~~~~~~----~iirgH~~~~--~G~~~f--~~~~~~~~~ 276 (293)
.++..+..|+.+|++ .||-||.||. +|-.+. +|+.++++-
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDG 554 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDG 554 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcC
Confidence 567788899999998 9999999998 677653 455555543
No 136
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=37.62 E-value=1.3e+02 Score=29.23 Aligned_cols=67 Identities=10% Similarity=0.024 Sum_probs=47.6
Q ss_pred cCceeEEecCCC-CHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHHHHHHHHHhhhhc-CCcEEEEcC
Q 022679 65 EAPMKICGDVHG-QYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 132 (293)
Q Consensus 65 ~~~i~viGDIHG-~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~evl~ll~~lk~~~-p~~v~~lrG 132 (293)
...++||=|-|. +.+.+.+.|+.+...+..+++.+||+...|+.+.+...-+..+-... .+.+++ -|
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~-~G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLS-VG 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEE-EC
Confidence 345788889554 68888888877654344678899999999999998877776544433 344544 46
No 137
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=36.51 E-value=21 Score=29.06 Aligned_cols=85 Identities=27% Similarity=0.453 Sum_probs=45.5
Q ss_pred cCCCCHHHHHHHHHhcCCCCCCee--eeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHH
Q 022679 73 DVHGQYSDLLRLFEYGGYPPKANY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECK 150 (293)
Q Consensus 73 DIHG~~~~L~~~l~~~~~~~~~~~--vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~ 150 (293)
|+.|++..|++.|+.+++|..-++ +-.||=- .-+.++..++ +.|+..|.-.. +...+..+....
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~p~----afLpil~~~L---~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGDPS----AFLPILHYAL---LSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCCHH----HHHHHHHHHH---HcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999944322 2234321 1122222222 22433321111 111222223334
Q ss_pred HhhhHHHHHHHhhhhccCCce
Q 022679 151 RRFNVRLWKAFTDCFNCLPVA 171 (293)
Q Consensus 151 ~~~~~~~~~~~~~~~~~lP~~ 171 (293)
.++.+.+|.-+.+.|..-|.-
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 456677788888877777754
No 138
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=33.12 E-value=2.6 Score=40.59 Aligned_cols=92 Identities=12% Similarity=-0.071 Sum_probs=66.0
Q ss_pred CeeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcCCcccchhhhhccchhHHHHhh----hHHHHHHHhhhhccCC
Q 022679 94 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF----NVRLWKAFTDCFNCLP 169 (293)
Q Consensus 94 ~~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~----~~~~~~~~~~~~~~lP 169 (293)
-..|+++++.+++.+.++.+.+-+..+..+..+....++||+.....+ +++.-.- ...+++..++-++.++
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~~R-----~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSFKR-----RYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcchhh-----hheeecccccCceEEEEeccCcCccce
Confidence 357899999999999999999888888888889999999995443221 1111100 1123455666677778
Q ss_pred ceEEeCCcEEeecCCCCCCCCC
Q 022679 170 VAALIDEKILCMHGGLSPDLSH 191 (293)
Q Consensus 170 ~~~~i~~~~l~vHgGi~p~~~~ 191 (293)
...+.+ ++++-||+..|....
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~h 144 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSH 144 (476)
T ss_pred eeeech-hhHhhcCCcCCcccc
Confidence 876644 899999999997653
No 139
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=32.55 E-value=1.9e+02 Score=26.24 Aligned_cols=58 Identities=26% Similarity=0.353 Sum_probs=31.0
Q ss_pred CCcEEEEcCCcccchhhhhccchhHHH-Hhh-hHHHHHHHhhhhccCCceEEeC-CcEEeecCCCCCC
Q 022679 124 PENFFLLRGNHECASINRIYGFYDECK-RRF-NVRLWKAFTDCFNCLPVAALID-EKILCMHGGLSPD 188 (293)
Q Consensus 124 p~~v~~lrGNHE~~~~~~~~~f~~e~~-~~~-~~~~~~~~~~~~~~lP~~~~i~-~~~l~vHgGi~p~ 188 (293)
..+|++|-||||.-. +..|. .... .+. ..+-| +.+..+|+.-.-. .+++-.|-||-.+
T Consensus 127 nknvvvlagnhein~-ngny~--arlanhkls~gDTY----nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYM--ARLANHKLSAGDTY----NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchHH--HHHhhCCCCccchh----hccccccccccCcchhhhhcccCceec
Confidence 468999999999753 22111 1000 011 12222 2356677764422 2688888888643
No 140
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=29.00 E-value=1.1e+02 Score=26.95 Aligned_cols=29 Identities=24% Similarity=0.139 Sum_probs=24.0
Q ss_pred HHHcCCcEEEEeccccCCceeeeCCeEEE
Q 022679 245 LKRHDLDLVCRAHQVVDFPTLSFSIFFLF 273 (293)
Q Consensus 245 l~~~~~~~iirgH~~~~~G~~~f~~~~~~ 273 (293)
+-..|+++||-||.++..+++...++.++
T Consensus 203 l~~~G~D~IiG~H~Hv~q~~E~~~~~~I~ 231 (239)
T cd07381 203 LIDAGADLVIGHHPHVLQGIEIYKGKLIF 231 (239)
T ss_pred HHHCCCCEEEcCCCCcCCCeEEECCEEEE
Confidence 33469999999999999999998877444
No 141
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=28.11 E-value=1.1e+02 Score=26.91 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=22.8
Q ss_pred HcCCcEEEEeccccCCceeeeCCeEE
Q 022679 247 RHDLDLVCRAHQVVDFPTLSFSIFFL 272 (293)
Q Consensus 247 ~~~~~~iirgH~~~~~G~~~f~~~~~ 272 (293)
..|+++||-||.++..+++...++.+
T Consensus 203 ~~G~DvIiG~H~H~~~~~e~~~~~~I 228 (239)
T smart00854 203 DAGADVVIGHHPHVLQPIEIYKGKLI 228 (239)
T ss_pred HcCCCEEEcCCCCcCCceEEECCEEE
Confidence 36999999999999999999887744
No 142
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=26.91 E-value=37 Score=28.92 Aligned_cols=36 Identities=33% Similarity=0.439 Sum_probs=25.2
Q ss_pred eCCcccCCCCcHHHHHHHHHhh-------hhcCCcEEEEcCCcc
Q 022679 99 LGDYVDRGKQSLETICLLLAYK-------IKYPENFFLLRGNHE 135 (293)
Q Consensus 99 LGD~VDrG~~s~evl~ll~~lk-------~~~p~~v~~lrGNHE 135 (293)
+||.|.||..++|-|.-=..+. +-+|.++.++. ||=
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhv 51 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHI 51 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccC
Confidence 7999999999999776543332 22677766665 774
No 143
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=26.75 E-value=46 Score=30.41 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=23.1
Q ss_pred eeeeeCCcccCCCCcHHHH-HHHHHhhhhcCCcEEEEcC
Q 022679 95 NYLFLGDYVDRGKQSLETI-CLLLAYKIKYPENFFLLRG 132 (293)
Q Consensus 95 ~~vfLGD~VDrG~~s~evl-~ll~~lk~~~p~~v~~lrG 132 (293)
+++|+||+|.+ ...+.+ ..|-.+|.+++..+++.-|
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIaNg 38 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIANG 38 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 58999999954 333332 5566677777766555543
No 144
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=26.65 E-value=1.3e+02 Score=26.61 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=26.0
Q ss_pred HHHHHcCCcEEEEeccccCCceeeeCCeEEEE
Q 022679 243 EFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFF 274 (293)
Q Consensus 243 ~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~ 274 (293)
..+-..|+++||-+|.++..|++.+.++.++-
T Consensus 210 ~~lidaGaDiIiG~HpHv~q~~E~y~~~~I~Y 241 (250)
T PF09587_consen 210 RALIDAGADIIIGHHPHVIQPVEIYKGKPIFY 241 (250)
T ss_pred HHHHHcCCCEEEeCCCCcccceEEECCEEEEE
Confidence 33334799999999999999999998875554
No 145
>PLN02965 Probable pheophorbidase
Probab=25.41 E-value=1.8e+02 Score=25.37 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=16.4
Q ss_pred HHHHHHHHcCC--cEEEEeccc
Q 022679 240 KVSEFLKRHDL--DLVCRAHQV 259 (293)
Q Consensus 240 ~~~~fl~~~~~--~~iirgH~~ 259 (293)
.+.++++..+. +.++.||.+
T Consensus 60 dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 60 PLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHhcCCCCCEEEEecCc
Confidence 37788888875 799999987
No 146
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.76 E-value=44 Score=31.55 Aligned_cols=58 Identities=22% Similarity=0.392 Sum_probs=36.5
Q ss_pred HhhCCCeeeecCceeEEecCC-CCHHHHHHHHHhcCCCCCCeeee-eCCccc--CCCCcHHHHHHHHHhh
Q 022679 55 FMRQPNLLELEAPMKICGDVH-GQYSDLLRLFEYGGYPPKANYLF-LGDYVD--RGKQSLETICLLLAYK 120 (293)
Q Consensus 55 l~~ep~~~~~~~~i~viGDIH-G~~~~L~~~l~~~~~~~~~~~vf-LGD~VD--rG~~s~evl~ll~~lk 120 (293)
++.-|-.++-.+.+.|+||.| |||.++... +..++| +-|+=. -|+....+..+..+|.
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHH
Confidence 456676777778899999999 777766432 222333 444421 2566667777766664
No 147
>PF11533 DUF3225: Protein of unknown function (DUF3225); InterPro: IPR024507 This family of proteins has no known function.; PDB: 2OWP_A 2RCD_B.
Probab=24.22 E-value=1.6e+02 Score=23.81 Aligned_cols=79 Identities=16% Similarity=0.100 Sum_probs=47.0
Q ss_pred CchhhhhhhCCCCCCCCCCcccCCCceeeeChhHHHHHHHHc---CCcEEEE-------eccc-------cCCceeeeCC
Q 022679 207 TGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRH---DLDLVCR-------AHQV-------VDFPTLSFSI 269 (293)
Q Consensus 207 ~~~~~dllWsdp~~~~~~~~~~~rG~~~~fG~~~~~~fl~~~---~~~~iir-------gH~~-------~~~G~~~f~~ 269 (293)
-..+..+.|.+|..-.. -....+||++++.+|...- +...-++ |.++ ..+|-.. .|
T Consensus 28 v~~Ld~lFw~~p~TvRy------g~~E~LyG~~aI~aFR~~R~~~~~~R~l~~~~itt~G~d~A~v~tef~r~~~~~-~G 100 (125)
T PF11533_consen 28 VDALDALFWDDPRTVRY------GAGENLYGHDAIRAFRAARPGGGPARTLERTVITTFGRDFATVSTEFRRDGSGR-IG 100 (125)
T ss_dssp HHHHHHCB--STT-EEE------ETTEEEESHHHHHHHHHHS--TTTT-EEEEEEEEEETTTEEEEEEEEEETTECC-EE
T ss_pred HHHHHHHhccCCceEEE------CCCccccCHHHHHHHHhcCCCCCCCcEEEEEEEEEecCceEEEEEEEEECCCCc-ee
Confidence 35678889999963211 1235789999999999876 2222222 2222 1122211 35
Q ss_pred eEEEEEeccCCcccceeeecccc
Q 022679 270 FFLFFWYRRAGKNVPLALATSIM 292 (293)
Q Consensus 270 ~~~~~~~~~~g~~~~l~~~~~~~ 292 (293)
.+.=.|.+..+.|.-.|+=.|+|
T Consensus 101 RQsQtWvr~~~gWrIvaAHVS~~ 123 (125)
T PF11533_consen 101 RQSQTWVRFPDGWRIVAAHVSLM 123 (125)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeEEEEEECCCCEEEEEEEEeec
Confidence 67788888888888888877765
No 148
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=24.18 E-value=3.6e+02 Score=25.81 Aligned_cols=44 Identities=20% Similarity=0.253 Sum_probs=18.7
Q ss_pred eeEEecCC-CCHHHHHHHHHhcCCCCCCeeeeeCCcccCCCCcHH
Q 022679 68 MKICGDVH-GQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLE 111 (293)
Q Consensus 68 i~viGDIH-G~~~~L~~~l~~~~~~~~~~~vfLGD~VDrG~~s~e 111 (293)
+.||=|-+ -+.+.+.+.|+.+...+..+++.+|+.-.-|+.+.+
T Consensus 298 ~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~ 342 (417)
T TIGR01143 298 LTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEE 342 (417)
T ss_pred cEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHH
Confidence 44444422 244555554444332112334445555444444443
No 149
>TIGR00758 UDG_fam4 uracil-DNA glycosylase, family 4. This well-conserved family of proteins is about 200 residues in length and homologous to the N-terminus of the DNA polymerase of phage SPO1 of Bacillus subtilis. The member from Thermus thermophilus HB8 is known to act as uracil-DNA glycosylase, an enzyme of DNA base excision repair. Its appearance as a domain of phage DNA polymerases could be consistent with uracil-DNA glycosylase activity.
Probab=23.18 E-value=4.5e+02 Score=21.96 Aligned_cols=72 Identities=15% Similarity=0.168 Sum_probs=44.1
Q ss_pred ecCceeEEecCCCCH-------------HHHHHHHHhcCCCCCCeeeeeCCcc------cCCCCcHH---HHHHHHHhhh
Q 022679 64 LEAPMKICGDVHGQY-------------SDLLRLFEYGGYPPKANYLFLGDYV------DRGKQSLE---TICLLLAYKI 121 (293)
Q Consensus 64 ~~~~i~viGDIHG~~-------------~~L~~~l~~~~~~~~~~~vfLGD~V------DrG~~s~e---vl~ll~~lk~ 121 (293)
.++++.+||+-=|.- .-|.++|+.+|+.+++.|+- ..+ +|-|...| +..+|...-.
T Consensus 20 ~~A~im~VgeaPg~~e~~~g~pf~g~sG~~L~~~l~~~gl~~~~vy~t--~~~kc~P~~~r~P~~~Ei~~c~~~l~~eI~ 97 (173)
T TIGR00758 20 PDANIMFVGEAPGREEDRKGRPFVGRAGKLLDEMLAAIGLSRENVYIT--NVVKCRPPNNRDPTPEEVEACAPYLVKQIE 97 (173)
T ss_pred CCCCEEEEeCCCCccccccCCCCcChHHHHHHHHHHHcCCCcccEEEe--ccccccCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 357899998654322 45678889999987765552 222 45565554 4555544333
Q ss_pred hcCCcEEEEcCCcccc
Q 022679 122 KYPENFFLLRGNHECA 137 (293)
Q Consensus 122 ~~p~~v~~lrGNHE~~ 137 (293)
.-..+++++.|+.=..
T Consensus 98 ~v~P~~Iv~lG~~a~~ 113 (173)
T TIGR00758 98 LIRPKVIICLGRTAAQ 113 (173)
T ss_pred hcCCCEEEEECHHHHH
Confidence 3344899999986543
No 150
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=23.18 E-value=70 Score=28.98 Aligned_cols=37 Identities=27% Similarity=0.418 Sum_probs=25.1
Q ss_pred eeeeeCCcccCCCCcHHHHHHHHHhhhhcCCcEEEEcC
Q 022679 95 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 132 (293)
Q Consensus 95 ~~vfLGD~VDrG~~s~evl~ll~~lk~~~p~~v~~lrG 132 (293)
+++|+||+|.+.-. .-+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEECC
Confidence 47899999986432 23456677777777766666544
No 151
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=22.69 E-value=40 Score=33.34 Aligned_cols=40 Identities=13% Similarity=0.051 Sum_probs=28.1
Q ss_pred ChhHHHHHHHHcCCc----EEEEeccccCCc--eee--eCCeEEEEEe
Q 022679 237 GPDKVSEFLKRHDLD----LVCRAHQVVDFP--TLS--FSIFFLFFWY 276 (293)
Q Consensus 237 G~~~~~~fl~~~~~~----~iirgH~~~~~G--~~~--f~~~~~~~~~ 276 (293)
.++..+..++.+|++ .||-||+|+.++ -.+ -+|+-++++-
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDG 561 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDG 561 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcC
Confidence 355677889999986 899999999864 333 2555555543
No 152
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=22.05 E-value=1.2e+02 Score=27.51 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=20.1
Q ss_pred hhHHHHHHHHcCCcEEEEeccccCCceeeeCCeEEEEEeccCCcccc
Q 022679 238 PDKVSEFLKRHDLDLVCRAHQVVDFPTLSFSIFFLFFWYRRAGKNVP 284 (293)
Q Consensus 238 ~~~~~~fl~~~~~~~iirgH~~~~~G~~~f~~~~~~~~~~~~g~~~~ 284 (293)
+..+++|+.....+ .++.. |=..|+|..+=+ ...+|+...
T Consensus 212 e~~i~rFl~~~p~r-----feva~-g~~~l~GV~iei-d~~Tg~a~k 251 (266)
T COG1692 212 EEPIKRFLTGLPQR-----FEVAS-GPAQLNGVLIEI-DDRTGKAVK 251 (266)
T ss_pred hHHHHHHHhCCCce-----eEecC-CCcEEEEEEEEe-cCCCCceEE
Confidence 44677888877532 23333 444555543333 335555444
No 153
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=21.63 E-value=6.7e+02 Score=23.46 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=71.4
Q ss_pred hHHHHHHHHHhccccCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCceeEEecCCCCHHHHHHHHHhcCCC-CCCe
Q 022679 17 ALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYP-PKAN 95 (293)
Q Consensus 17 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~L~~~l~~~~~~-~~~~ 95 (293)
+..-+++.+...+....-..+.++.+.+...+.+ +..+. -|-+-|--|+|+|.+....+.....+ ....
T Consensus 90 Kt~~LL~aL~~~~~~~~Y~plDIS~~~L~~a~~~----L~~~~------~p~l~v~~l~gdy~~~l~~l~~~~~~~~~r~ 159 (319)
T TIGR03439 90 KVGILLEALERQKKSVDYYALDVSRSELQRTLAE----LPLGN------FSHVRCAGLLGTYDDGLAWLKRPENRSRPTT 159 (319)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHh----hhhcc------CCCeEEEEEEecHHHHHhhcccccccCCccE
Confidence 3455666665322111112345677666444444 33111 12233445888899888877542122 2345
Q ss_pred eeeeCCcccCCCCcHHHHHHHHHhhh--hcCCcEEEE--cCCcccchhhhhccchhHHHHhhhHHHHHHHhhhh
Q 022679 96 YLFLGDYVDRGKQSLETICLLLAYKI--KYPENFFLL--RGNHECASINRIYGFYDECKRRFNVRLWKAFTDCF 165 (293)
Q Consensus 96 ~vfLGD~VDrG~~s~evl~ll~~lk~--~~p~~v~~l--rGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~ 165 (293)
++|+|--+.- ...-|...+|..+.. ..|+..++| =+..+...+...|.-.....+.+...+...+++-+
T Consensus 160 ~~flGSsiGN-f~~~ea~~fL~~~~~~~l~~~d~lLiG~D~~k~~~~l~~AY~d~~gvTa~FnlN~L~~~Nr~L 232 (319)
T TIGR03439 160 ILWLGSSIGN-FSRPEAAAFLAGFLATALSPSDSFLIGLDGCKDPDKVLRAYNDPGGVTRRFVLNGLVHANEIL 232 (319)
T ss_pred EEEeCccccC-CCHHHHHHHHHHHHHhhCCCCCEEEEecCCCCCHHHHHHHhcCCcchhHHHHHHHHHHHHHHh
Confidence 6689988864 445777777776643 456555444 33444444444443333334455555555555544
No 154
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=20.82 E-value=3.7e+02 Score=25.71 Aligned_cols=8 Identities=25% Similarity=0.596 Sum_probs=3.9
Q ss_pred ceeEEecC
Q 022679 67 PMKICGDV 74 (293)
Q Consensus 67 ~i~viGDI 74 (293)
+++|+|+.
T Consensus 326 ~i~VlG~~ 333 (417)
T TIGR01143 326 KILVLGDM 333 (417)
T ss_pred EEEEEcCc
Confidence 34555554
Done!