Your job contains 1 sequence.
>022682
MATTRLTLPSTSRYILPFSCSSFKTVRYLSNSGFNTGENRSVYSDIGQRKSAAPIKFKAS
AAASDSLMITAKTEVGRGIDVSSLLANVTRAALKFLRPRPSVNPTSSNSHIQRFIERVII
DCRFFTFFAVAGSLLGSILCFVEGCFLLLQSYVKFFNSLSQKANQAPIMHLVIEAIDMFL
VGTALLIFGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIG
HAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFLLSRLSASITAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022682
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2140411 - symbol:AT4G19390 "AT4G19390" species... 395 1.0e-36 1
TAIR|locus:2173239 - symbol:AT5G13720 species:3702 "Arabi... 348 9.8e-32 1
UNIPROTKB|Q5HU78 - symbol:CJE1166 "Membrane protein, puta... 132 2.3e-08 1
TIGR_CMR|CJE_1166 - symbol:CJE_1166 "membrane protein, pu... 132 2.3e-08 1
UNIPROTKB|Q484I7 - symbol:CPS_1797 "Putative membrane pro... 125 1.4e-07 1
TIGR_CMR|CPS_1797 - symbol:CPS_1797 "putative membrane pr... 125 1.4e-07 1
>TAIR|locus:2140411 [details] [associations]
symbol:AT4G19390 "AT4G19390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009941 "chloroplast envelope" evidence=IDA]
EMBL:CP002687 GO:GO:0009941 InterPro:IPR005134 Pfam:PF03350
EMBL:AF378856 IPI:IPI00545210 RefSeq:NP_567583.1 UniGene:At.19094
EnsemblPlants:AT4G19390.1 GeneID:827680 KEGG:ath:AT4G19390
TAIR:At4g19390 InParanoid:Q94JM4 OMA:LCFIKGC PhylomeDB:Q94JM4
ProtClustDB:CLSN2917585 Genevestigator:Q94JM4 InterPro:IPR016804
PIRSF:PIRSF022348 Uniprot:Q94JM4
Length = 273
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 73/190 (38%), Positives = 125/190 (65%)
Query: 103 NPTSSNSHIQRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQSYVKFFNSLSQK 162
N T+ ++ IE+VI CRF TF GSLLGS+LCF++GC ++ S++++
Sbjct: 89 NSTNRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------S 142
Query: 163 ANQAPIMHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKNIKEKSSQIPASN---LFGLFY 219
N+ ++ L++EAID++L+GT +L+FG+GLY +F+ + + E + SN LFG+F
Sbjct: 143 VNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFT 202
Query: 220 LKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSAC 279
LK P+W+E+ SVS+ ++++GH ++M+L + + +K + + + DL+C + + SSAC
Sbjct: 203 LKERPQWLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSAC 262
Query: 280 IFLLSRLSAS 289
+FLLSRL+ S
Sbjct: 263 LFLLSRLNGS 272
>TAIR|locus:2173239 [details] [associations]
symbol:AT5G13720 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] EMBL:CP002688 EMBL:AB006704 GO:GO:0009706
UniGene:At.43777 UniGene:At.49018 InterPro:IPR005134 Pfam:PF03350
InterPro:IPR016804 PIRSF:PIRSF022348 EMBL:AY150387 IPI:IPI00538391
RefSeq:NP_196876.1 IntAct:Q9FNA1 STRING:Q9FNA1 PRIDE:Q9FNA1
EnsemblPlants:AT5G13720.1 GeneID:831217 KEGG:ath:AT5G13720
TAIR:At5g13720 InParanoid:Q9FNA1 OMA:NGCVYIV PhylomeDB:Q9FNA1
ProtClustDB:CLSN2687039 Genevestigator:Q9FNA1 Uniprot:Q9FNA1
Length = 262
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 61/175 (34%), Positives = 116/175 (66%)
Query: 115 IERVIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQSYVKFFNSLSQKANQAPIMHLVIE 174
+ER+I D RF AV GSL GS+LCF+ GC ++++Y ++ + S+ + ++ ++E
Sbjct: 83 VERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVE 142
Query: 175 AIDMFLVGTALLIFGVGLYAMFVGSK--NIKEKSSQ-IPASNLFGLFYLKTPPKWVEMGS 231
AID++L GT +LIF +GLY +F+ ++ +S + + +S+LFG+F +K PKW+++ S
Sbjct: 143 AIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMKISS 202
Query: 232 VSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFLLSRL 286
+ + ++++GH ++M+L V++ E+ + + T LDL+ ++ LSSA +++L L
Sbjct: 203 LDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNL 257
>UNIPROTKB|Q5HU78 [details] [associations]
symbol:CJE1166 "Membrane protein, putative" species:195099
"Campylobacter jejuni RM1221" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG2862
InterPro:IPR005134 Pfam:PF03350 HOGENOM:HOG000103962 OMA:VDLYLIA
PIRSF:PIRSF026509 PIR:C81304 RefSeq:YP_179157.1 STRING:Q5HU78
GeneID:3231675 KEGG:cjr:CJE1166 PATRIC:20044125
ProtClustDB:CLSK879049 BioCyc:CJEJ195099:GJC0-1193-MONOMER
Uniprot:Q5HU78
Length = 168
Score = 132 (51.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/179 (22%), Positives = 83/179 (46%)
Query: 111 IQRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQ----SYVKFFNSLSQKANQA 166
+++ E +++ R T V L+G+ + F + +L+ +Y FF++ S
Sbjct: 2 LEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIFYTYNYFFDAGSNVDLHE 61
Query: 167 PIMHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKW 226
++ L+I A+D++L+ L IF G+Y +F+ I+E F K
Sbjct: 62 DVVALIIGAVDLYLMALVLFIFSFGVYELFISE--IEE-------------FKQTKQSKV 106
Query: 227 VEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFLLSR 285
+E+ S+ Q + ++ ++MVL V ++ + T +D+ AG+ L ++ L +
Sbjct: 107 LEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGLYFLHK 165
>TIGR_CMR|CJE_1166 [details] [associations]
symbol:CJE_1166 "membrane protein, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=ISS] EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG2862 InterPro:IPR005134
Pfam:PF03350 HOGENOM:HOG000103962 OMA:VDLYLIA PIRSF:PIRSF026509
PIR:C81304 RefSeq:YP_179157.1 STRING:Q5HU78 GeneID:3231675
KEGG:cjr:CJE1166 PATRIC:20044125 ProtClustDB:CLSK879049
BioCyc:CJEJ195099:GJC0-1193-MONOMER Uniprot:Q5HU78
Length = 168
Score = 132 (51.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/179 (22%), Positives = 83/179 (46%)
Query: 111 IQRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQ----SYVKFFNSLSQKANQA 166
+++ E +++ R T V L+G+ + F + +L+ +Y FF++ S
Sbjct: 2 LEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIFYTYNYFFDAGSNVDLHE 61
Query: 167 PIMHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKW 226
++ L+I A+D++L+ L IF G+Y +F+ I+E F K
Sbjct: 62 DVVALIIGAVDLYLMALVLFIFSFGVYELFISE--IEE-------------FKQTKQSKV 106
Query: 227 VEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFLLSR 285
+E+ S+ Q + ++ ++MVL V ++ + T +D+ AG+ L ++ L +
Sbjct: 107 LEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGLYFLHK 165
>UNIPROTKB|Q484I7 [details] [associations]
symbol:CPS_1797 "Putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG2862
InterPro:IPR005134 Pfam:PF03350 RefSeq:YP_268528.1 STRING:Q484I7
GeneID:3522211 KEGG:cps:CPS_1797 HOGENOM:HOG000103962 OMA:VDLYLIA
ProtClustDB:CLSK938312 BioCyc:CPSY167879:GI48-1867-MONOMER
PIRSF:PIRSF026509 Uniprot:Q484I7
Length = 164
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 112 QRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGC---FLLLQSYVKFFNSLSQKANQAPI 168
+RF E ++ R F V ++ + + GC F LLQ + + S ++ +
Sbjct: 3 KRF-ESLLWSSRLLLLFGVVCCVITAATLILLGCVEVFHLLQGMFSYLITHSSDVSRDNL 61
Query: 169 MHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVE 228
+ +VIE +D FL+ + L IF GLY +F+ S I+E SN K K +
Sbjct: 62 VLMVIEILDTFLLSSILFIFAFGLYELFISS--IEE-------SN-------KHQSKAFQ 105
Query: 229 MGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFL 282
+ S+ + ++++G ++M+L +++ I ++++ A LL S ++L
Sbjct: 106 ISSIDELKAKLGKVIVMILVIKLFSYLVEIKPQNIVEILYMAIIVLLVSVSLWL 159
>TIGR_CMR|CPS_1797 [details] [associations]
symbol:CPS_1797 "putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG2862 InterPro:IPR005134
Pfam:PF03350 RefSeq:YP_268528.1 STRING:Q484I7 GeneID:3522211
KEGG:cps:CPS_1797 HOGENOM:HOG000103962 OMA:VDLYLIA
ProtClustDB:CLSK938312 BioCyc:CPSY167879:GI48-1867-MONOMER
PIRSF:PIRSF026509 Uniprot:Q484I7
Length = 164
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 112 QRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGC---FLLLQSYVKFFNSLSQKANQAPI 168
+RF E ++ R F V ++ + + GC F LLQ + + S ++ +
Sbjct: 3 KRF-ESLLWSSRLLLLFGVVCCVITAATLILLGCVEVFHLLQGMFSYLITHSSDVSRDNL 61
Query: 169 MHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVE 228
+ +VIE +D FL+ + L IF GLY +F+ S I+E SN K K +
Sbjct: 62 VLMVIEILDTFLLSSILFIFAFGLYELFISS--IEE-------SN-------KHQSKAFQ 105
Query: 229 MGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFL 282
+ S+ + ++++G ++M+L +++ I ++++ A LL S ++L
Sbjct: 106 ISSIDELKAKLGKVIVMILVIKLFSYLVEIKPQNIVEILYMAIIVLLVSVSLWL 159
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.136 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 278 0.00081 115 3 11 22 0.41 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 593 (63 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.46u 0.12s 20.58t Elapsed: 00:00:07
Total cpu time: 20.46u 0.12s 20.58t Elapsed: 00:00:07
Start: Fri May 10 12:01:08 2013 End: Fri May 10 12:01:15 2013