Query 022682
Match_columns 293
No_of_seqs 111 out of 370
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 05:22:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022682.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022682hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK05208 hypothetical protein; 100.0 4.8E-38 1E-42 275.6 18.6 147 109-276 3-151 (168)
2 TIGR00645 HI0507 conserved hyp 100.0 1.6E-36 3.6E-41 265.7 17.1 155 111-286 1-159 (167)
3 PF03350 UPF0114: Uncharacteri 100.0 6.1E-36 1.3E-40 249.7 14.7 124 118-256 1-124 (124)
4 COG2862 Predicted membrane pro 100.0 6.4E-34 1.4E-38 249.6 16.4 156 110-286 3-159 (169)
5 COG3223 Predicted membrane pro 55.2 24 0.00052 31.0 4.8 42 246-287 92-133 (138)
6 PF01618 MotA_ExbB: MotA/TolQ/ 42.5 2E+02 0.0044 24.0 8.5 39 163-201 90-128 (139)
7 COG0805 TatC Sec-independent p 24.8 3.4E+02 0.0074 25.9 7.6 94 132-252 112-210 (255)
8 PF04156 IncA: IncA protein; 24.3 1.5E+02 0.0033 25.7 4.9 48 239-286 13-63 (191)
9 PF07784 DUF1622: Protein of u 23.7 3.6E+02 0.0077 21.2 6.4 57 229-285 18-75 (77)
10 COG4709 Predicted membrane pro 19.5 7.4E+02 0.016 23.1 10.3 23 76-98 40-63 (195)
No 1
>PRK05208 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=275.60 Aligned_cols=147 Identities=17% Similarity=0.288 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHHHHHHH
Q 022682 109 SHIQRFIERVIIDCRFFTFFAVAGSLLGSILCF-VEGCFLLLQSYVKFFNSLSQKANQAPIMHLVIEAIDMFLVGTALLI 187 (293)
Q Consensus 109 ~~iE~~~E~~L~~sR~lvllaVi~sLl~SllLF-~~G~~~v~~~~~~~~~~~~~~~~~~~lIl~vIeaIDlfLIa~vLlI 187 (293)
+++|+.||+++|+|||++ +|||+||++|+.+| +.++.++++...+.+. .++++++..++++||+||+|++|+|
T Consensus 3 ~~~e~~~E~~l~~sRwl~-~pv~~gLi~a~~l~~~~f~~el~~~~~~~~~-----~~~~~~il~vl~lIDl~Lia~lLlI 76 (168)
T PRK05208 3 KRMERIIERLIFASRWLQ-APLYLGLSLALAVLVYKFFQELWHLLPHVFS-----LDESDLILVVLSLIDVVLVANLLVM 76 (168)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999999995 99999999999999 8888888888777765 4688999999999999999999999
Q ss_pred HhhcceeeceecCCccccCcCCCccccccccccCCCCcceeeCChhHHHHHHHHHHHHHHHHHHHHHhccCcccChhhHH
Q 022682 188 FGVGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLV 267 (293)
Q Consensus 188 f~~GlYELFIS~id~~~~~~~~~~s~l~g~f~l~~~P~WL~I~SlddLK~KL~~VIVmIL~V~fLe~fl~v~~~t~lDLL 267 (293)
|++|+||||||++|.++|+ ++|+||+++|+||||.||+++||||++|+|||+|++++..++.++.
T Consensus 77 v~~ggYElFISkid~~~~~---------------~~p~wL~~~~l~~LK~KL~~vIV~Is~V~llk~fl~~~~~~~~~~~ 141 (168)
T PRK05208 77 VIFSGYENFVSRLDIDGHP---------------DEPEWLGKVDASSLKVKLAASIVAISSIHLLKTFMNADNYSDNKLM 141 (168)
T ss_pred HHhhhHHHhhccCccccCC---------------CCCccceecCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCHHHHH
Confidence 9999999999999986553 6799999999999999999999999999999999999877776655
Q ss_pred H-HHHHHHHH
Q 022682 268 C-FAGAALLS 276 (293)
Q Consensus 268 ~-~a~aIllv 276 (293)
| .+++...+
T Consensus 142 w~~~ihl~fv 151 (168)
T PRK05208 142 WQVIIHLTFV 151 (168)
T ss_pred HHHHHHHHHH
Confidence 5 44555544
No 2
>TIGR00645 HI0507 conserved hypothetical transmembrane protein. This conserved hypothetical protein with four predicted transmembrane regions is found in E. coli, Haemophilus influenzae, and Helicobacter pylori, among completed genomes. A similar protein from Aquifex aeolicus appears to share a central region of homology and a similar overall arrangement of hydrophobic stretches, and forms a bidirectional best hit with several members of the seed alignment. However, it is uncertain whether the observed similarity represents full-length homology and/or equivalent function, and so it is excluded from the seed and scores below the trusted cutoff.
Probab=100.00 E-value=1.6e-36 Score=265.70 Aligned_cols=155 Identities=12% Similarity=0.275 Sum_probs=125.1
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHHHHHHHHh
Q 022682 111 IQRFIERVIIDCRFFTFFAVAGSLLGSILCFVEG-CFLLLQSYVKFFNSLSQKANQAPIMHLVIEAIDMFLVGTALLIFG 189 (293)
Q Consensus 111 iE~~~E~~L~~sR~lvllaVi~sLl~SllLF~~G-~~~v~~~~~~~~~~~~~~~~~~~lIl~vIeaIDlfLIa~vLlIf~ 189 (293)
+|+.||+++|+|||+ ++|||+||++|+.++... +.++++.+.+. .+.++++++..++++||+||+|++|+||+
T Consensus 1 ~e~~~E~~l~~SRwl-l~pvy~gLi~a~~l~~~~f~~el~~~~~~~-----~~~~~~~~il~vl~lID~~Lia~lLlIv~ 74 (167)
T TIGR00645 1 QENIIEKIIFASRWL-LAPIYLGLSLTLVILSYKFIKELWHLLINV-----NDMDENDLMLGVLNLVDVVMIAGLLVMVT 74 (167)
T ss_pred ChhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999 899999999998864321 33444433322 23568899999999999999999999999
Q ss_pred hcceeeceecCCccccCcCCCccccccccccCCCCcceeeCChhHHHHHHHHHHHHHHHHHHHHHhccCcccChhhHHHH
Q 022682 190 VGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSLDLVCF 269 (293)
Q Consensus 190 ~GlYELFIS~id~~~~~~~~~~s~l~g~f~l~~~P~WL~I~SlddLK~KL~~VIVmIL~V~fLe~fl~v~~~t~lDLL~~ 269 (293)
+|+||||||++|.++++ ++|+||+++|+||||.||+++||||++|+|||+|++.+..++.+++|.
T Consensus 75 ~ggYElFISkid~~~~~---------------~~p~wL~~~~l~~LK~KL~~vIV~Is~I~lLk~fl~~~~~~~~~~~w~ 139 (167)
T TIGR00645 75 IGGYEIFVSKLDTRNHP---------------EQPEWLSHVDATVLKVKVSMSIVAISSIHLLQTFMNASNMPENTMMWQ 139 (167)
T ss_pred hccHhHhhccCccccCC---------------CCCCceeecCHHHHHHHHHHHHHHHhHHHHHHHHHhhhhCCHHHHHHH
Confidence 99999999999987654 679999999999999999999999999999999999987677776554
Q ss_pred -HHHHHHH--HHHHHHHhhc
Q 022682 270 -AGAALLS--SACIFLLSRL 286 (293)
Q Consensus 270 -a~aIllv--a~aly~l~k~ 286 (293)
++++..+ ++.+-+.-|.
T Consensus 140 ~~ih~~fv~s~~~~a~~d~~ 159 (167)
T TIGR00645 140 VLIHLGFVVSAIALAYTDKI 159 (167)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 4455444 3334444443
No 3
>PF03350 UPF0114: Uncharacterized protein family, UPF0114; InterPro: IPR005134 This conserved hypothetical protein family with four predicted transmembrane regions is found in Escherichia coli, Haemophilus influenzae, and Helicobacter pylori 26695, among completed genomes.
Probab=100.00 E-value=6.1e-36 Score=249.66 Aligned_cols=124 Identities=31% Similarity=0.679 Sum_probs=117.0
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHHHHHHHHhhcceeece
Q 022682 118 VIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQSYVKFFNSLSQKANQAPIMHLVIEAIDMFLVGTALLIFGVGLYAMFV 197 (293)
Q Consensus 118 ~L~~sR~lvllaVi~sLl~SllLF~~G~~~v~~~~~~~~~~~~~~~~~~~lIl~vIeaIDlfLIa~vLlIf~~GlYELFI 197 (293)
++|+|||++++|++|+++|+++||++|++++++.+.++++....+.++++++..++|++|+||+|++++||++|+|||||
T Consensus 1 ~l~~sR~l~~~~vig~l~~~~llf~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vl~~vD~~Lia~vllI~~~g~YelFI 80 (124)
T PF03350_consen 1 LLFASRWLVLPAVIGLLLGSVLLFVKGAVEIFHAFIEVFSAHVFSSDEKDLILGVLELVDLFLIANVLLIFAFGLYELFI 80 (124)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCeeeeE
Confidence 47999999999999999999999999999999999999996556778999999999999999999999999999999999
Q ss_pred ecCCccccCcCCCccccccccccCCCCcceeeCChhHHHHHHHHHHHHHHHHHHHHHhc
Q 022682 198 GSKNIKEKSSQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVLEKFN 256 (293)
Q Consensus 198 S~id~~~~~~~~~~s~l~g~f~l~~~P~WL~I~SlddLK~KL~~VIVmIL~V~fLe~fl 256 (293)
|++|.++++ ++|+||+++|+||||+||+++||||++|+|||+|+
T Consensus 81 s~~~~~~~~---------------~~p~wL~i~s~~~LK~KL~~vIV~Il~V~~l~~~~ 124 (124)
T PF03350_consen 81 SKLDIAEHD---------------DRPKWLGIRSLDDLKLKLGSVIVMILVVHFLKKFI 124 (124)
T ss_pred ecccccccC---------------cccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999987764 67999999999999999999999999999999874
No 4
>COG2862 Predicted membrane protein [Function unknown]
Probab=100.00 E-value=6.4e-34 Score=249.57 Aligned_cols=156 Identities=17% Similarity=0.338 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHHHHHHHHh
Q 022682 110 HIQRFIERVIIDCRFFTFFAVAGSLLGSILCFVEGCFLLLQSYVKFFNSLSQKANQAPIMHLVIEAIDMFLVGTALLIFG 189 (293)
Q Consensus 110 ~iE~~~E~~L~~sR~lvllaVi~sLl~SllLF~~G~~~v~~~~~~~~~~~~~~~~~~~lIl~vIeaIDlfLIa~vLlIf~ 189 (293)
+.|+++|+++|+|||+ ++|||.+++.++.+|.++ .++.+++.+.+.. +.++.+++..++++||++|+|++++|++
T Consensus 3 ~~e~~~e~~i~~SRwl-l~pv~~gLi~al~lf~~~---f~~~i~~~~~~~~-~~~e~~lil~~l~liDl~Lva~lLvmv~ 77 (169)
T COG2862 3 MLEKIIERLIFASRWL-LAPVYLGLIVALVLFAYK---FFKEIWHLLPNLF-DMGENDLILAALSLVDLLLVAGLLVMVS 77 (169)
T ss_pred CcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHHHcccc-ccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999977 789999999999999988 3444444444432 3459999999999999999999999999
Q ss_pred hcceeeceecCCccccCcCCCccccccccccCCCCcceeeCChhHHHHHHHHHHHHHHHHHHHHHhccCcc-cChhhHHH
Q 022682 190 VGLYAMFVGSKNIKEKSSQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPV-VTSLDLVC 268 (293)
Q Consensus 190 ~GlYELFIS~id~~~~~~~~~~s~l~g~f~l~~~P~WL~I~SlddLK~KL~~VIVmIL~V~fLe~fl~v~~-~t~lDLL~ 268 (293)
+|+||||||++|.++ + ++|+||++.|++|||+|++++||+|++||||+.|++.+. .++.++++
T Consensus 78 ~g~YelFVskLd~~~-~---------------~~~~wL~~~d~~~LK~Kl~~sIV~IssV~~L~~fl~~~~~~~~~~~~~ 141 (169)
T COG2862 78 FGGYELFVSKLDIAE-E---------------DKPSWLGIVDLSDLKQKLAASIVAISSVHLLKVFLNAKNLSDNKLMWF 141 (169)
T ss_pred HhhHHHHHhhccccc-c---------------cccchhhcccHHHHHHHHHHHHHHHHHHHHHHHHhchhhCCchhHHHH
Confidence 999999999999776 2 679999999999999999999999999999999999987 67899999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 022682 269 FAGAALLSSACIFLLSRL 286 (293)
Q Consensus 269 ~a~aIllva~aly~l~k~ 286 (293)
+.+++..++-+.++.++-
T Consensus 142 ~~ihl~fv~sa~~~~~~d 159 (169)
T COG2862 142 VIIHLTFVLSALYLAYKD 159 (169)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998888764
No 5
>COG3223 Predicted membrane protein [Function unknown]
Probab=55.17 E-value=24 Score=31.00 Aligned_cols=42 Identities=17% Similarity=0.350 Sum_probs=32.7
Q ss_pred HHHHHHHHHhccCcccChhhHHHHHHHHHHHHHHHHHHhhcc
Q 022682 246 VLQVEVLEKFNSIPVVTSLDLVCFAGAALLSSACIFLLSRLS 287 (293)
Q Consensus 246 IL~V~fLe~fl~v~~~t~lDLL~~a~aIllva~aly~l~k~~ 287 (293)
..+++-+-+.+-++-+++.|.+++++||++.+.++|+..+.+
T Consensus 92 YiGITAiiRLiIvdH~~~~~~ll~s~AILlLvi~l~l~~~~~ 133 (138)
T COG3223 92 YIGITAIIRLIIVDHESPIDTLLYSGAILLLVIALFLVNSKR 133 (138)
T ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhhc
Confidence 345555555555677789999999999999999999887654
No 6
>PF01618 MotA_ExbB: MotA/TolQ/ExbB proton channel family MotA family only; InterPro: IPR002898 This family groups together integral membrane proteins that appear to be involved in translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flagellar motor that uses a proton gradient to generate rotational motion in the flagellar []. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.; GO: 0008565 protein transporter activity, 0006810 transport, 0016020 membrane
Probab=42.46 E-value=2e+02 Score=23.99 Aligned_cols=39 Identities=10% Similarity=0.087 Sum_probs=32.7
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHhhcceeeceecCC
Q 022682 163 ANQAPIMHLVIEAIDMFLVGTALLIFGVGLYAMFVGSKN 201 (293)
Q Consensus 163 ~~~~~lIl~vIeaIDlfLIa~vLlIf~~GlYELFIS~id 201 (293)
.+...+..++-++.+..+.|.++=|+++-.|..+-.+.+
T Consensus 90 ~~~~~l~~gi~~Al~tT~~GL~vai~~~~~~~~l~~~~~ 128 (139)
T PF01618_consen 90 GDPSQLAGGISVALITTAYGLVVAIPALPFYNYLKRRVE 128 (139)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999999999988877766664
No 7
>COG0805 TatC Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]
Probab=24.79 E-value=3.4e+02 Score=25.93 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHhhhccCCcccHHHHHHHHHHHHHHHHHHHHHhhcc-eeeceecCCccccC
Q 022682 132 GSLLGSILCFVEGCFLLLQSYV----KFFNSLSQKANQAPIMHLVIEAIDMFLVGTALLIFGVGL-YAMFVGSKNIKEKS 206 (293)
Q Consensus 132 ~sLl~SllLF~~G~~~v~~~~~----~~~~~~~~~~~~~~lIl~vIeaIDlfLIa~vLlIf~~Gl-YELFIS~id~~~~~ 206 (293)
.-+.+|.++|+.|..-.+..+. +++..... .......-.+|.|+=-...+++++|+ +|+ ++=.
T Consensus 112 ~~~~~s~~LF~~G~~faYfvv~P~~~~F~~~~~~-----~~~~~~~~~i~~y~~f~l~l~~~FGv~FEl---Pvv~---- 179 (255)
T COG0805 112 PLLIPSFVLFLLGAAFAYFVVFPLVFKFLLSFAA-----PDGVSPALSISKYLSFVLTLLLAFGVAFEL---PVVI---- 179 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ccceeeeecHHHHHHHHHHHHHHHHHHHHH---HHHH----
Confidence 3456677788888654443332 33332211 11122333567777777788888886 222 1100
Q ss_pred cCCCccccccccccCCCCcceeeCChhHHHHHHHHHHHHHHHHHHH
Q 022682 207 SQIPASNLFGLFYLKTPPKWVEMGSVSQAQSRIGHAVMMVLQVEVL 252 (293)
Q Consensus 207 ~~~~~s~l~g~f~l~~~P~WL~I~SlddLK~KL~~VIVmIL~V~fL 252 (293)
-.-.|+++.+-+.||+|=-.+++++.++..+
T Consensus 180 ---------------~~L~~~Giv~~~~L~~~rr~~iv~~fViaav 210 (255)
T COG0805 180 ---------------VLLTRLGIVTPETLKKKRRYAIVAAFVIAAI 210 (255)
T ss_pred ---------------HHHHHcCCccHHHHHHcCCeeeehHHHHHHH
Confidence 0136899999999999999999999998877
No 8
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=24.34 E-value=1.5e+02 Score=25.72 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHh---ccCcccChhhHHHHHHHHHHHHHHHHHHhhc
Q 022682 239 IGHAVMMVLQVEVLEKF---NSIPVVTSLDLVCFAGAALLSSACIFLLSRL 286 (293)
Q Consensus 239 L~~VIVmIL~V~fLe~f---l~v~~~t~lDLL~~a~aIllva~aly~l~k~ 286 (293)
+.+.++++.+|.+|--+ ....+....=+..+|+++++++++++++.+.
T Consensus 13 ilgilli~~gI~~Lv~~~~~l~~~~s~~lg~~~lAlg~vL~~~g~~~~~~~ 63 (191)
T PF04156_consen 13 ILGILLIASGIAALVLFISGLGALISFILGIALLALGVVLLSLGLLCLLSK 63 (191)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444555555554433 2233445566777777777777777666543
No 9
>PF07784 DUF1622: Protein of unknown function (DUF1622); InterPro: IPR012427 This is a family of 14 highly conserved sequences, from hypothetical proteins expressed by both bacterial and archaeal species.
Probab=23.70 E-value=3.6e+02 Score=21.23 Aligned_cols=57 Identities=12% Similarity=0.244 Sum_probs=37.4
Q ss_pred eCChhHHHHHHHHHHHHHHHHHHHHHhccCcccChh-hHHHHHHHHHHHHHHHHHHhh
Q 022682 229 MGSVSQAQSRIGHAVMMVLQVEVLEKFNSIPVVTSL-DLVCFAGAALLSSACIFLLSR 285 (293)
Q Consensus 229 I~SlddLK~KL~~VIVmIL~V~fLe~fl~v~~~t~l-DLL~~a~aIllva~aly~l~k 285 (293)
....++.|..++..+..-|-...=...++.-...++ |+..+|+-+++=.+-.|+++|
T Consensus 18 ~~~~~~iR~~lg~~l~lgLEfllaAdIl~Tv~~pt~~~l~~La~Iv~IRt~Ls~~L~~ 75 (77)
T PF07784_consen 18 SEAYRRIRLELGRSLLLGLEFLLAADILRTVIAPTWEDLGILAAIVLIRTFLSYFLHK 75 (77)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457789999999999988766554443333334444 455555444444888888886
No 10
>COG4709 Predicted membrane protein [Function unknown]
Probab=19.48 E-value=7.4e+02 Score=23.11 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=15.7
Q ss_pred Ccc-cchhhhhhhhhhhHHhhccC
Q 022682 76 GRG-IDVSSLLANVTRAALKFLRP 98 (293)
Q Consensus 76 ~~~-~~~~~~~~~~~~a~~~~~~~ 98 (293)
||- .+++..|++|+.+.-...-+
T Consensus 40 GksE~EI~~~LG~P~eiA~ei~s~ 63 (195)
T COG4709 40 GKSEEEIAKDLGDPKEIAAEILSE 63 (195)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHH
Confidence 544 67788888888776655444
Done!