BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022683
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 186 LARANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACK 245
L + N A + N+L+++ + +D + + ++ D + E++L+ + + CK
Sbjct: 254 LVKGNYAATI-FKNSLQEIDPMLYKHLFVQQDIKYIPTENVSDLSMEEQLRRLQEERTCK 312
Query: 246 RCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
C + ++ +PC HL CK C L CP+C ++ F S
Sbjct: 313 VCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTFLS 358
>sp|P41435|IAP1_NPVAC Apoptosis inhibitor 1 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 286
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 170 EACLRKAEMESESWQRLARANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDN 229
+ C+R ++WQR A N LS ++ + + V++ D DD+
Sbjct: 173 DCCVRDWHTNEDTWQRHAAENPQCYFVLSVKGKEFCQNSITVTHV---------DKRDDD 223
Query: 230 NREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLV-SCPVCNSAKVASMEV 288
N + + K CK C R +L+PCRH C C QC L CP C +++
Sbjct: 224 NLNENADDIEEKYECKVCLERQRDAVLMPCRHFCVCVQCYFGLDQKCPTCRQDVTDFIKI 283
Query: 289 F 289
F
Sbjct: 284 F 284
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 186 LARANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACK 245
LA+ N A N+L ++ + +D S+ D E++L++ + + CK
Sbjct: 496 LAKGNTA-ATSFRNSLREIDPALYRDIFVQQDIRSLPTDDIAALPMEEQLRKLQEERMCK 554
Query: 246 RCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
C R ++ +PC HL CK C L CP+C ++ F
Sbjct: 555 VCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 228 DNNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASME 287
D + E++L+ + + CK C RN ++ +PC HL +CKQC + CP+C + +
Sbjct: 433 DISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQK 492
Query: 288 VF 289
+F
Sbjct: 493 IF 494
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
E++L+ + + CK C RN ++ +PC HL +CKQC + CP+C + ++F S
Sbjct: 438 EEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS 497
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 21/160 (13%)
Query: 149 MNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQRLARANEAMVMDLSNTLEQVKERI 208
++L R E L+Q T++ L + + Q R M D + + ++ERI
Sbjct: 81 IHLTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIR----MGFDFKDVKKIMEERI 136
Query: 209 VLVSNRAEDAESVCCD--SCDDNNREQEL-----------KEERRKLA----CKRCNSRN 251
+ + E + D S + E EL +E R+L CK C R+
Sbjct: 137 QTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRH 196
Query: 252 SCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
V+ +PC HL +CKQC + CP+C++ VF S
Sbjct: 197 IAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS 236
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 228 DNNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASME 287
D + E++L+ + + CK C RN ++ +PC HL +CKQC + CP+C + +
Sbjct: 433 DISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCCTVITFKQK 492
Query: 288 VF 289
+F
Sbjct: 493 IF 494
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 216 EDAESVCCDSCDDNNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSC 275
+D + + + D E++L+ + + CK C + ++ +PC HL CK C L C
Sbjct: 529 QDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKC 588
Query: 276 PVCNSAKVASMEVF 289
P+C S ++ F
Sbjct: 589 PICRSTIKGTVRTF 602
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 186 LARANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACK 245
L + + A+ + N+L+++ + +D + + + D E++L+ + + CK
Sbjct: 500 LVKGSSAVTI-FKNSLQEIDPMLYKRFFVQQDRKYIPTEDISDLPVEEQLRRLQEERTCK 558
Query: 246 RCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
C + ++ +PC HL C+ C L CP+C ++ F
Sbjct: 559 VCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTF 602
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 233 QELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
Q LKEER CK C ++ +L +PC HL C +C L CP+C +A S+ F
Sbjct: 290 QRLKEER---MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 343
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
E+ L+ + + CK C R+ V+ +PC HL +CKQC + CP+CN+ VF S
Sbjct: 177 EEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCNAVIDFKQRVFMS 236
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 236 KEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLV-------SCPVCNSAKVASMEV 288
+EER+K C C ++ VLLLPCRHLC C+ C L+ +CP+C + + ++ V
Sbjct: 365 QEERKK--CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNV 422
Query: 289 F 289
+
Sbjct: 423 Y 423
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 149 MNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQRLARANEAMVMDLSNTLEQVKERI 208
++L R E L+Q T++ L + + Q R M D + + ++ERI
Sbjct: 81 IHLTRSLEGALVQTTKKTPSLTKRINDTIFPNPMLQEAIR----MGFDFKDVKKIMEERI 136
Query: 209 -----------VLVSNRAEDAESVCCDSCDDNNREQELKEER--RKLA----CKRCNSRN 251
VLV++ + + + + ++E+ E R+L CK C R+
Sbjct: 137 QTSGSNYKTLEVLVADLVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKLCKICMDRH 196
Query: 252 SCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
V+ +PC HL +CKQC + CP+C++ VF S
Sbjct: 197 IAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS 236
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 236 KEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLV-------SCPVCNSAKVASMEV 288
+EER+K C C ++ VLLLPCRHLC C+ C L+ +CP+C + ++ V
Sbjct: 374 QEERKK--CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLCRRGILQTLNV 431
Query: 289 F 289
+
Sbjct: 432 Y 432
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 235 LKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
LKEER CK C ++ +L +PC HL C +C L CP+C +A S+ F
Sbjct: 348 LKEER---MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 399
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
E++L+ + + CK C R ++ +PC HL C++C L CP+C ++ F
Sbjct: 553 EEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTF 610
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
E++L+ + + CK C + ++ +PC HL CK+C L CP+C ++ F
Sbjct: 552 EEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTF 609
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
E++L+ + + CK C + V+ +PC HL C++C L CP+C ++ F
Sbjct: 559 EEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 616
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 233 QELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVF 289
++LKEER CK C + ++ +PC HL C +C L CP+C +A S+ F
Sbjct: 310 RQLKEER---MCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 363
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 230 NREQELKEERRKL----ACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNS 280
NR L++E+ +L +C C S ++LLPCRH C C + L CP+C S
Sbjct: 879 NRLVSLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRS 933
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 230 NREQELKEERRKLA----CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
N L+EE R+L CK C V+ LPC HL +C QC + +CP+C
Sbjct: 433 NGNLSLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMC 485
>sp|A5D8Q0|XIAP_XENLA E3 ubiquitin-protein ligase XIAP OS=Xenopus laevis GN=xiap PE=2
SV=2
Length = 488
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 231 REQELKEERRKL----ACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
RE ++E+ R+L CK C R ++ +PC HL +C C L CP+C
Sbjct: 424 REISIEEKLRQLEEEKVCKVCMDRRITIVFIPCGHLVACAVCADVLDKCPIC 475
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 173 LRKAEMESESWQRLARANEAMVMDLSNTLEQVKERIVLVSNRA---EDAESVCCDSCDDN 229
+R+ E + R A N +V +S E+ SNR+ E ++ C C +
Sbjct: 315 IRRTSKEVYDYARRALYNAGIVDMMSRPGERTP------SNRSPSREQEGALDCGGCQQS 368
Query: 230 NREQE-LKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNS 280
QE L++ R L C C PC H+ C+ C A L SCPVC S
Sbjct: 369 RLLQEKLQKLREALLCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSCPVCRS 420
>sp|Q5BKL8|XIAP_XENTR E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis GN=xiap PE=2
SV=1
Length = 492
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
E++L++ + CK C R ++ +PC HL +C C L CP+C
Sbjct: 433 EEKLRQLEEEKICKVCMDRRISIVFIPCGHLVACAVCADVLDKCPIC 479
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 30/146 (20%)
Query: 152 MRQKEEDLIQAT---------RRAMELEACLRKAEMESESWQRLARANEAMVMDLSNTLE 202
++Q+ E+L +A R + L+ E + WQ+ AR +
Sbjct: 125 LKQRPEELAEAGFFYTGQGDKTRCFCCDGGLKDWEPDDAPWQQHARWYDRC--------- 175
Query: 203 QVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLA--------CKRCNSRNSCV 254
E ++LV R + + V ++C + + E ER + CK C V
Sbjct: 176 ---EYVLLVKGR-DFVQRVMTEACVVRDADNEPHIERPAVEAEVADDRLCKICLGAEKTV 231
Query: 255 LLLPCRHLCSCKQCEAFLVSCPVCNS 280
+PC H+ +C +C A + +CPVC
Sbjct: 232 CFVPCGHVVACGKCAAGVTTCPVCRG 257
>sp|O10296|IAP1_NPVOP Apoptosis inhibitor 1 OS=Orgyia pseudotsugata multicapsid
polyhedrosis virus GN=IAP1 PE=4 SV=1
Length = 275
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 242 LACKRCNSRNSCVLLLPCRHLCSCKQCE-AFLVSCPVCNSAKVASMEVF 289
L CK C R +LLPCRH C C QC A CP C +++F
Sbjct: 225 LECKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCRQDVADFIKIF 273
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 222 CCDSCDDNNRE----QELKEERRKL-ACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCP 276
CC++C ++ +E R K+ C C+ R + V PC H+ +C+ C A + C
Sbjct: 990 CCETCAPRVKKCLICRETVSSREKIDECLVCSDRRAAVFFRPCGHMVACEHCSALMKKCV 1049
Query: 277 VCNS 280
+C +
Sbjct: 1050 LCRT 1053
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 211 VSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEA 270
+ N+ +A +V S + + + EE+ CK C LPC H+ +C +C +
Sbjct: 362 IFNKIVEATAVATPSTNSSG-STSIPEEK---LCKICYGAEYNTAFLPCGHVVACAKCAS 417
Query: 271 FLVSCPVCNSAKVASMEVFGS 291
+ CP+C M V+ S
Sbjct: 418 SVTKCPLCRKPFTDVMRVYFS 438
>sp|O75150|BRE1B_HUMAN E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens GN=RNF40 PE=1
SV=4
Length = 1001
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 137 LGAVLK--SVESKAMNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQ------RLAR 188
LG V K ++ S+A+ L ++K ++A + A +L+ L + Q R AR
Sbjct: 842 LGGVEKELTLRSQALELNKRK---AVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 189 ANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCN 248
E+ L++ +E I + + E V + D ++E+KE + +L C CN
Sbjct: 899 EKESF------NLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCN 952
Query: 249 SRNSCVLLLPCRHL----CSCKQCEAFLVSCPVCNSAKVASMEVFGS-DF 293
+R +L C H+ C + EA CP CN+A FG+ DF
Sbjct: 953 TRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAA-------FGAHDF 995
>sp|Q5RAU7|BRE1B_PONAB E3 ubiquitin-protein ligase BRE1B OS=Pongo abelii GN=RNF40 PE=2
SV=1
Length = 1001
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 198 SNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCNSRNSCVLLL 257
S L++ +E I + + E V + D ++E+KE + +L C CN+R +L
Sbjct: 902 SFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLT 961
Query: 258 PCRHL----CSCKQCEAFLVSCPVCNSAKVASMEVFGS-DF 293
C H+ C + EA CP CN+A FG+ DF
Sbjct: 962 KCFHVFCFECVRGRYEARQRKCPKCNAA-------FGAHDF 995
>sp|Q8CJB9|BRE1B_RAT E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40
PE=1 SV=1
Length = 1002
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 137 LGAVLK--SVESKAMNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQ------RLAR 188
LG V K ++ S+A+ L ++K ++A + A +L+ L + Q R AR
Sbjct: 843 LGGVEKELTLRSQALELNKRK---AVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 899
Query: 189 ANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCN 248
E+ L++ +E I + + E V + D ++E+KE + +L C CN
Sbjct: 900 EKESF------NLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCN 953
Query: 249 SRNSCVLLLPCRHL----CSCKQCEAFLVSCPVCNSAKVASMEVFGS-DF 293
+R +L C H+ C + EA CP CN+A FG+ DF
Sbjct: 954 TRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAA-------FGAHDF 996
>sp|Q4R7K7|BRE1B_MACFA E3 ubiquitin-protein ligase BRE1B OS=Macaca fascicularis GN=RNF40
PE=2 SV=1
Length = 1001
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 137 LGAVLK--SVESKAMNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQ------RLAR 188
LG V K ++ S+A+ L ++K ++A + A +L+ L + Q R AR
Sbjct: 842 LGGVEKELTLRSQALELNKRK---AVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 189 ANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCN 248
E+ L++ +E I + + E V + D ++E+KE + +L C CN
Sbjct: 899 EKESF------NLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCN 952
Query: 249 SRNSCVLLLPCRHL----CSCKQCEAFLVSCPVCNSAKVASMEVFGS-DF 293
+R +L C H+ C + EA CP CN+A FG+ DF
Sbjct: 953 TRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAA-------FGAHDF 995
>sp|Q3U319|BRE1B_MOUSE E3 ubiquitin-protein ligase BRE1B OS=Mus musculus GN=Rnf40 PE=2
SV=2
Length = 1001
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 137 LGAVLK--SVESKAMNLMRQKEEDLIQATRRAMELEACLRKAEMESESWQ------RLAR 188
LG V K ++ S+A+ L ++K ++A + A +L+ L + Q R AR
Sbjct: 842 LGGVEKELTLRSQALELNKRK---AVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 189 ANEAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCN 248
E+ L++ +E I + + E V + D ++E+KE + +L C CN
Sbjct: 899 EKESF------NLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCN 952
Query: 249 SRNSCVLLLPCRHL----CSCKQCEAFLVSCPVCNSAKVASMEVFGS-DF 293
+R +L C H+ C + EA CP CN+A FG+ DF
Sbjct: 953 TRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAA-------FGAHDF 995
>sp|Q60953|PML_MOUSE Protein PML OS=Mus musculus GN=Pml PE=1 SV=3
Length = 885
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 232 EQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQC-EAFLVSCPVCNSAKVA 284
EQ ++EE + L C C ++ C LLPC H C C EA + CP+C + A
Sbjct: 50 EQAIQEEFQFLRCPSCQAQAKCPKLLPCLHTL-CSGCLEAPGLQCPICKAPGQA 102
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C + +LLPCRH C C C + CP+C
Sbjct: 274 CVVCQNGGVNWVLLPCRHACLCDSCVCYFKQCPMC 308
>sp|Q99675|CGRF1_HUMAN Cell growth regulator with RING finger domain protein 1 OS=Homo
sapiens GN=CGRRF1 PE=1 SV=1
Length = 332
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C + +LLPCRH C C C + CP+C
Sbjct: 274 CVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMC 308
>sp|Q8BMJ7|CGRF1_MOUSE Cell growth regulator with RING finger domain protein 1 OS=Mus
musculus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C + +LLPCRH C C C + CP+C
Sbjct: 274 CVVCQNGGVNWVLLPCRHACLCDSCVRYFKQCPMC 308
>sp|P41436|IAP_GVCPM Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus
(isolate Mexico/1963) GN=IAP PE=4 SV=1
Length = 275
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 26/160 (16%)
Query: 152 MRQKEEDLIQAT---------RRAMELEACLRKAEMESESWQRLAR-----ANEAMVMDL 197
M+Q+ E + A + + L+ E E W++ R A +V
Sbjct: 122 MKQRPEQMADAGFFYTGYGDNTKCFYCDGGLKDWEPEDVPWEQHVRWFDRCAYVQLVKGR 181
Query: 198 SNTLEQVKERIVL------VSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCNSRN 251
+ + E VL VS A +E + + E+E + E KL CK C
Sbjct: 182 DYVQKVITEACVLPGENTTVSTAAPVSEPI-----PETKIEKEPQVEDSKL-CKICYVEE 235
Query: 252 SCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
V +PC H+ +C +C + CP+C + ++V+ S
Sbjct: 236 CIVCFVPCGHVVACAKCALSVDKCPMCRKIVTSVLKVYFS 275
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C+ + + VL PC H+C+C+ C + + C C
Sbjct: 864 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 898
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C+ + + VL PC H+C+C+ C + + C C
Sbjct: 867 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 901
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C+ + + VL PC H+C+C+ C + + C C
Sbjct: 866 CVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 900
>sp|P41454|IAP2_NPVAC Probable apoptosis inhibitor 2 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP2 PE=4 SV=1
Length = 249
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEV 288
CK C R V +PCRHL C +C C VCN+ + +E
Sbjct: 202 CKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIET 246
>sp|Q86B79|UNK_DROME RING finger protein unkempt OS=Drosophila melanogaster GN=unk PE=1
SV=1
Length = 599
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C +C N V L PC HL C C + CP C
Sbjct: 556 CMKCEENNRTVTLEPCNHLSICNTCAESVTECPYC 590
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 207 RIVLVSNRAEDAESVCCDSCDDNNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCK 266
R +L + + E +C D + + +++L+ + L C C + PC H+ C
Sbjct: 344 RSLLRQTKVDREERMCVDCRETHVLKEKLQRLQEALTCALCCEQEISAAFCPCGHMFCCY 403
Query: 267 QCEAFLVSCPVCNS 280
C + L CPVC S
Sbjct: 404 NCASQLQCCPVCRS 417
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 34.7 bits (78), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 244 CKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVC 278
C C+ + + VL PC H+C+C+ C + C C
Sbjct: 866 CVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQC 900
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 119 HIQSERLRSALLEQRKQQLGAVLKSV-----ESKAMNLMRQKEEDLIQATRRAMELEACL 173
++ ER + + ++GA + V ++K + L K+ L + +M+ E L
Sbjct: 174 YMTGERPKGVQETEEMLKIGATITGVGELVLDNKTIKLQPPKDGMLFYLS--SMDYEGLL 231
Query: 174 RKAEMESESWQRLARANEA-----MVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDD 228
K E++ W+ L+ + L KE+ L + + E ES +
Sbjct: 232 EKQEVQMRWWRILSIVFGVASCITLFFILRRKYRHYKEKQHLKNLQREFEES---RARQR 288
Query: 229 NNREQELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVS---CPVC 278
+E + KEE + C C S + L C H+CSC C L S CP+C
Sbjct: 289 VQQEPQNKEEVQN-PCSICLSTEKSCVFLECGHVCSCISCYQALPSPKKCPIC 340
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 119 HIQSERLRSALLEQRKQQLGAVLKSVESKAMN---LMRQKEEDLIQATRRAMELEACLRK 175
+I ER + + ++GA L V ++ + Q + +Q + + ++ L++
Sbjct: 173 YISGERPKGIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQR 232
Query: 176 AEMESESWQRLARANE-----AMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNN 230
E W+ LA + L Q +ER+ L + E E +
Sbjct: 233 QESSVRLWKVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQE----HEAQLLS 288
Query: 231 REQELKEERRKLACKRC-NSRNSCVLLLPCRHLCSCKQCEAFLV---SCPVCNSAKVASM 286
R + E K AC C +S SCV L C H+CSC +C L CP+C A +
Sbjct: 289 RAKPEDRESLKSACVVCLSSFKSCVFL-ECGHVCSCTECYRALPEPKKCPICRQAITRVI 347
Query: 287 EVFGS 291
++ S
Sbjct: 348 PLYNS 352
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 234 ELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
+L++E C+ C +LL C H+ +C +C + CP+C V ++ VF S
Sbjct: 315 QLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS 372
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 234 ELKEERRKLACKRCNSRNSCVLLLPCRHLCSCKQCEAFLVSCPVCNSAKVASMEVFGS 291
+L++E C+ C +LL C H+ +C +C + CP+C V ++ VF S
Sbjct: 315 QLQDEEDDSLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS 372
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 119 HIQSERLRSALLEQRKQQLGAVLKSVESKAMN---LMRQKEEDLIQATRRAMELEACLRK 175
+I ER + + ++GA L V ++ + Q + +Q + + ++ L++
Sbjct: 173 YISGERPKGIQETEEMLKVGATLTGVGELVLDNNSVRLQPPKQGMQYYLSSQDFDSLLQR 232
Query: 176 AEMESESWQRLARAN-----EAMVMDLSNTLEQVKERIVLVSNRAEDAESVCCDSCDDNN 230
E W+ LA + L Q +ER+ L + E E +
Sbjct: 233 QESSVRLWKVLALVFGFATCATLFFILRKQYLQRQERLRLKQMQEEFQE----HEAQLLS 288
Query: 231 REQELKEERRKLACKRC-NSRNSCVLLLPCRHLCSCKQCEAFLV---SCPVCNSAKVASM 286
R + E K AC C +S SCV L C H+CSC +C L CP+C A +
Sbjct: 289 RAKPEDRESLKSACVVCLSSFKSCVFL-ECGHVCSCTECYRALPEPKKCPICRQAITRVI 347
Query: 287 EVFGS 291
++ S
Sbjct: 348 PLYNS 352
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.127 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,233,639
Number of Sequences: 539616
Number of extensions: 3308162
Number of successful extensions: 20138
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 19177
Number of HSP's gapped (non-prelim): 1494
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)