Query 022685
Match_columns 293
No_of_seqs 176 out of 1349
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:30:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nio_A Guanidinobutyrase; PA14 100.0 2.6E-65 8.9E-70 468.6 27.6 271 13-293 37-315 (319)
2 3m1r_A Formimidoylglutamase; s 100.0 3.6E-64 1.2E-68 461.6 27.3 266 15-291 39-316 (322)
3 3lhl_A Putative agmatinase; pr 100.0 2.6E-64 8.9E-69 455.7 25.9 267 12-293 6-276 (287)
4 3niq_A 3-guanidinopropionase; 100.0 1.2E-64 4.1E-69 465.1 22.9 271 13-293 34-312 (326)
5 1gq6_A Proclavaminate amidino 100.0 4.6E-64 1.6E-68 459.9 22.5 272 12-292 28-306 (313)
6 3pzl_A Agmatine ureohydrolase; 100.0 2.5E-64 8.6E-69 460.0 20.2 264 13-293 34-299 (313)
7 1woh_A Agmatinase; alpha/beta 100.0 8.7E-64 3E-68 456.4 23.5 269 12-293 27-302 (305)
8 4dz4_A Agmatinase; hydrolase; 100.0 1.2E-63 4.1E-68 458.1 23.4 264 13-292 46-317 (324)
9 2a0m_A Arginase superfamily pr 100.0 5.2E-62 1.8E-66 446.4 23.2 268 12-293 28-308 (316)
10 1xfk_A Formimidoylglutamase; f 100.0 7.3E-61 2.5E-65 442.4 25.8 263 13-293 42-328 (336)
11 2cev_A Protein (arginase); enz 100.0 5.8E-60 2E-64 430.3 21.2 262 15-289 3-295 (299)
12 2ef5_A Arginase; TTHA1496, str 100.0 5.9E-60 2E-64 428.5 20.0 260 15-289 2-286 (290)
13 4g3h_A Arginase (ROCF); rossma 100.0 2.5E-59 8.6E-64 430.2 21.9 267 16-292 1-310 (330)
14 2aeb_A Arginase 1; hydrolase, 100.0 7.6E-59 2.6E-63 426.9 19.7 266 13-291 5-307 (322)
15 1pq3_A Arginase II, mitochondr 100.0 5.8E-59 2E-63 425.0 18.5 263 15-290 2-302 (306)
16 3sl1_A Arginase; metallohydrol 100.0 2E-54 6.7E-59 402.2 21.0 205 83-289 167-409 (413)
17 2z84_A UFSP1, UFM1-specific pr 34.4 7.7 0.00026 32.6 -0.2 33 104-139 138-173 (218)
18 1tif_A IF3-N, translation init 31.5 19 0.00064 25.1 1.4 28 239-271 27-54 (78)
19 2jwk_A Protein TOLR; periplasm 31.4 66 0.0023 21.0 4.3 38 82-123 28-65 (74)
20 2qgh_A Diaminopimelate decarbo 29.3 3.1E+02 0.011 24.6 12.4 97 156-254 92-192 (425)
21 1ycy_A Conserved hypothetical 22.6 58 0.002 21.6 2.4 15 101-115 16-30 (71)
22 1k8k_G P16, ARP2/3 complex 16 21.7 41 0.0014 26.5 1.9 74 217-291 11-86 (151)
23 3god_A CAS1; crispr, metallonu 21.6 52 0.0018 29.2 2.8 33 104-139 60-92 (328)
24 1hi9_A Dciaa, dipeptide transp 21.3 87 0.003 27.1 4.1 32 215-251 2-36 (274)
25 2fiq_A Putative tagatose 6-pho 20.2 57 0.0019 30.1 2.8 33 104-139 77-127 (420)
26 3pv9_D Putative uncharacterize 20.2 59 0.002 28.7 2.9 35 103-140 37-71 (322)
No 1
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=100.00 E-value=2.6e-65 Score=468.62 Aligned_cols=271 Identities=28% Similarity=0.528 Sum_probs=235.8
Q ss_pred cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCC-CCCCCcccccCCcccccccCCCCCHHHHHHHHH
Q 022685 13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKE-LNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVIT 91 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~-~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~ 91 (293)
+++|+|+|+|||.|+++|+|+++||+|||++++.+..+. .+.+.+ +... .++|+||+.+.+ .+.++++++++
T Consensus 37 ~~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~-~~~~~~~~~~~-~v~D~Gdv~~~~-----~~~~~~~~~i~ 109 (319)
T 3nio_A 37 ALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYN-MATGAAPFDSL-NVADIGDVAINT-----FNLLEAVRIIE 109 (319)
T ss_dssp TCSEEEEECCCCTTCSSCCCGGGHHHHHHHHGGGCCSEE-TTTCBCGGGTS-CEEEEEECCCCT-----TCHHHHHHHHH
T ss_pred CCCEEEEeeeeCCCCCCCchHHHHHHHHHHHhhhccccC-cccCcccccCC-cEEEecCCCCCC-----CCHHHHHHHHH
Confidence 489999999999999999999999999999998765432 222322 2233 489999998754 36889999999
Q ss_pred HHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CCcEE
Q 022685 92 ESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLL 169 (293)
Q Consensus 92 ~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~~~v 169 (293)
+.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|+++++.|+.++|||||+++++++. +++++
T Consensus 110 ~~v~~~l~~g-~~pi~lGGdHsit~~~~~al~~~~-~~l~vI~~DAH~Dl~~~~~g~~~~hG~~~~~~~~~~~~~~~~~~ 187 (319)
T 3nio_A 110 QEYDRILGHG-ILPLTLGGDHTITLPILRAIXKXH-GXVGLVHVDAHADVNDHMFGEXIAHGTTFRRAVEEDLLDCDRVV 187 (319)
T ss_dssp HHHHHHHHTT-CEEEEECCCGGGHHHHHHHHHHHH-CSEEEEEECSSCCCCSCBTTBSCSTTTHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCC-CEEEEECCcchhhHHHHHHHHhhc-CceEEEEEecCcccCCCCCccccccccHHHHHhhccCCCCCcEE
Confidence 9999999887 799999999999999999999988 5899999999999999888888999999999999864 47999
Q ss_pred EEcccC--CChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHH
Q 022685 170 QVGIRS--ITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD 245 (293)
Q Consensus 170 ~iG~r~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~e 245 (293)
+||+|+ .+++|++++++.|+++++++++.+. ..+++.+....+.++||||||+|||||+++|||++|+|||||++|
T Consensus 188 ~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~e 267 (319)
T 3nio_A 188 QIGLRAQGYTAEDFNWSRXQGFRVVQAEECWHXSLEPLMAEVREXVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQ 267 (319)
T ss_dssp EEEECSEESSTHHHHHHHHHTCEEEEGGGTTTCCSHHHHHHHHHHHCSSEEEEEEEGGGBCTTTCCCBSSCCSSCBCHHH
T ss_pred EEEeCCCCCCHHHHHHHHhcCcEEEEHHHhhhcCHHHHHHHHHHhcCCCcEEEEEecCccChhhCCCCCCCCCCCCCHHH
Confidence 999998 5889999999999999999998753 445554432223579999999999999999999999999999999
Q ss_pred HHHHHHhhc-CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 246 VLNILHNLQ-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 246 l~~~l~~i~-~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
++++++.+. .+++|+||||+||.+|. +++|+.+||+++++++..+++
T Consensus 268 ~~~~l~~l~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~~~ 315 (319)
T 3nio_A 268 AMEIIRGCQGLDLIGCDLVEVSPPYDT-TGNTSLLGANLLYEMLCVLPG 315 (319)
T ss_dssp HHHHHHTTTTSEEEEEEEECBCGGGCS-SSHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHhccCCeeEEEEEEECCCCCC-CCcHHHHHHHHHHHHHHHHHH
Confidence 999999985 48999999999999996 589999999999999998864
No 2
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=100.00 E-value=3.6e-64 Score=461.63 Aligned_cols=266 Identities=29% Similarity=0.499 Sum_probs=230.1
Q ss_pred cEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHHHHHH
Q 022685 15 STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESV 94 (293)
Q Consensus 15 ~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~~~v 94 (293)
+|+|+|+|||.|+++|+|+++||+|||++++++..+. .+.+.++... .++|+||+.+.+ .+.+++++++++.+
T Consensus 39 ~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~-~~~~~~~~~~-~v~D~GDv~~~~-----~~~~~~~~~i~~~v 111 (322)
T 3m1r_A 39 GPALIGVPLSKSSISHSGASFAPGTIRQALKHSSAYS-AELGEHVVSE-LLYDLGDIDIHV-----TDIVKSHHHIFQTM 111 (322)
T ss_dssp EEEEEEECCCTTCSSCCCGGGHHHHHHHHHHHSBCEE-TTTTEESSSS-CEEEEEEECCCS-----SCHHHHHHHHHHHH
T ss_pred CEEEEecCcCCCCCCCcHHHHHHHHHHHHhhhcCccC-hhcccCcCCC-ceeecCCCCCCC-----CCHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765432 2233344443 489999998754 36889999999999
Q ss_pred HHHHhcCCC--ccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CCcEEE
Q 022685 95 KLVMEEDPL--HPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLLQ 170 (293)
Q Consensus 95 ~~~~~~~~~--~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~~~v~ 170 (293)
+.+++++ . +||+|||||++|+|.++++++++ ++++|||||||+|+++ ++|+.++|||||+++++++. ++++++
T Consensus 112 ~~~l~~g-~~~~pi~lGGdHsit~~~~~al~~~~-~~~~vI~~DAH~Dl~~-~~~~~~~hG~~~~~~~~~~~~~~~~~~~ 188 (322)
T 3m1r_A 112 HALLSDH-PDWVPLILGGDNSISYSTIKAIAQTK-GTTAVIQFDAHHDVRN-TEDGGPTNGTPFRRLLDEEIIEGQHLIQ 188 (322)
T ss_dssp HHHHHHC-TTEEEEEEESCTTHHHHHHHHHHHHH-CSEEEEEECSSCCCCC-SSCC--CTTCHHHHHHHTTSSCGGGEEE
T ss_pred HHHHhcC-CCceeEEeCCCccccHHHHHHHHHhC-CCeEEEEccCCccccC-CCCCCCCCccHHHHHHhccCCCCceEEE
Confidence 9999887 8 99999999999999999999877 6999999999999998 77778899999999999764 589999
Q ss_pred EcccCC--ChhhHHHHHhcCceEEecccccch--HHHHHHhh--ccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHH
Q 022685 171 VGIRSI--TKEGREQGKRFGVEQYEMRTFSRD--RQFLENLK--LGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFR 244 (293)
Q Consensus 171 iG~r~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~--~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~ 244 (293)
||+|++ +++|++++++.|+++++++++.+. ..+++++. ...++++||||||+|||||+++|||++|+|||||++
T Consensus 189 iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~ 268 (322)
T 3m1r_A 189 LGIREFSNSQAYEAYAKKHNVNIHTMDMIREKGLIPTIKEILPVVQDKTDFIFISVDMDVLDQSHAPGCPAIGPGGLYTD 268 (322)
T ss_dssp EEECTTSSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGBCTTTCTTSSSCCSSCBCHH
T ss_pred EeeCCCCCCHHHHHHHHHCCCEEEEHHHHhhcCHHHHHHHHHHHhhccCCeEEEEEeecccChhhCCCCCCCCCCCCCHH
Confidence 999995 889999999999999999998753 23444332 123457999999999999999999999999999999
Q ss_pred HHHHHHHhhc--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhh
Q 022685 245 DVLNILHNLQ--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKI 291 (293)
Q Consensus 245 el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~ 291 (293)
|++++++.+. .+++|+||||++|.+|. +++|+.+||+|+++++.++
T Consensus 269 e~~~il~~l~~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~ 316 (322)
T 3m1r_A 269 ELLEAVKYIAQQPNVAGIEIVEVDPTLDF-RDMTSRAAAHVLLHALKGM 316 (322)
T ss_dssp HHHHHHHHHHTSTTEEEEEEECCCGGGSS-TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCEEEEEEEEECCCCCC-CChHHHHHHHHHHHHHHHH
Confidence 9999999994 58999999999999996 5899999999999999987
No 3
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=100.00 E-value=2.6e-64 Score=455.70 Aligned_cols=267 Identities=28% Similarity=0.466 Sum_probs=231.9
Q ss_pred ccCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHHH
Q 022685 12 AVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVIT 91 (293)
Q Consensus 12 ~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~ 91 (293)
-+++|+|+|+|||.|+++|+|+++||+|||++++.+..+. ...+.++... .++|+||+.+.+ .+.++++++++
T Consensus 6 ~~~~i~iiGvP~D~g~~~r~Ga~~GP~aIR~as~~l~~~~-~~~~~~~~~~-~v~D~Gdv~~~~-----~~~~~~~~~i~ 78 (287)
T 3lhl_A 6 EESNLIVFGVGFDGTTSNRPGARFASSSMRKEFYGLETYS-PFLDLDLEDY-NICDYGDLEISV-----GSTEQVLKEIY 78 (287)
T ss_dssp TTCSEEEEEECCCTTCCSSCCGGGHHHHHHHHHTTSCSEE-TTTTEEGGGS-CEEEEEECCCCS-----SCHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCCCCChHHHHHHHHHHHHHhcccccC-ccccCCcCCC-cEEeccCCCCCC-----CCHHHHHHHHH
Confidence 3589999999999999999999999999999998765432 1222233333 479999998754 26789999999
Q ss_pred HHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCCCCcEEEE
Q 022685 92 ESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQV 171 (293)
Q Consensus 92 ~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~~~~~v~i 171 (293)
+.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|+++++.|..++|||||+++++...+++++++
T Consensus 79 ~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~~-~~l~vI~~DAH~Dl~~~~~G~~~shgt~~~~~~~~~~~~~i~~i 156 (287)
T 3lhl_A 79 QETYKIVRDS-KVPFMIGGEHLVTLPAFKAVHEKY-NDIYVIHFDAHTDLREEYNNSKNSHATVIKRIWDIVGDNKIFQF 156 (287)
T ss_dssp HHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHHHC-SSEEEEEECSBCCCCSCBTTBSSSTTTHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHhCC-CeEEEeCCcchhhHHHHHHHHHhc-CCcEEEEecCCcccCcccCCCccccccHHHHHhhhcCcccEEEE
Confidence 9999999887 799999999999999999999987 58999999999999999888889999999999986557899999
Q ss_pred cccCCChhhHHHHHhc-CceEEecccccchHHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022685 172 GIRSITKEGREQGKRF-GVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNIL 250 (293)
Q Consensus 172 G~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~el~~~l 250 (293)
|+|+.+++|++++++. ++++++.+ +....++++.+. ..+||||||+|||||+++|||++|+|||||++|+++++
T Consensus 157 GiR~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~l~~l~----~~~vylSiDiDvlDpa~aPgtgtp~pgGlt~~e~~~~l 231 (287)
T 3lhl_A 157 GIRSGTKEEFKFATEEKHTYMEIGG-IDTFENIVNMLN----GKNIYLTIDLDVLDASVFPGTGTPEPGGVNYREFQEIF 231 (287)
T ss_dssp EECBCCHHHHHHHHTSCSSEEEETC-CTTHHHHHHHTT----TCEEEEEEEGGGBCTTTCCSBSSCCSSCBCHHHHTHHH
T ss_pred EcCCCCHHHHHHHHhcCCCEEEecH-HhHHHHHHHHcC----CCcEEEEEecCcCCHhhCCCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999998 88887764 443355666652 35899999999999999999999999999999999999
Q ss_pred Hhh--cC-CeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 251 HNL--QA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 251 ~~i--~~-~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
+.+ +. +++|+||||+||.+|. +++|+.+||+++++++..+++
T Consensus 232 ~~l~~~~~~vvg~DivE~~P~~D~-~~~Ta~laa~li~~~l~~~~~ 276 (287)
T 3lhl_A 232 KIIKNSNINIVGCDIVELSPDYDT-TGVSTVIACKILRELCLIISD 276 (287)
T ss_dssp HHHHTSCCEEEEEEEECBCGGGCT-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEEEEECCCCCC-CChHHHHHHHHHHHHHHHHHH
Confidence 998 44 8999999999999996 589999999999999998753
No 4
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A
Probab=100.00 E-value=1.2e-64 Score=465.08 Aligned_cols=271 Identities=30% Similarity=0.495 Sum_probs=232.5
Q ss_pred cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHHHH
Q 022685 13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITE 92 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~~ 92 (293)
.++|+|+|+|||.|+++|+|+++||+|||++++.+..+.. +.+.+..+...++|+||+.+.+ .+.+++++++++
T Consensus 34 ~~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~~-~~~~~~~~~~~v~D~Gdv~~~~-----~~~~~~~~~i~~ 107 (326)
T 3niq_A 34 ALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVHH-VSRIAPYDLVRVGDLGDAPVNP-----IDLLDSLRRIEG 107 (326)
T ss_dssp GCSEEEEEECCCTTCSSCCCGGGHHHHHHHHGGGCCSSCT-TTCCCHHHHSCEEEEEECCCCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEecccccCCCCCccHHHHHHHHHHHhhcccccCc-ccCCCcccCCcEEEecCCCCCC-----CCHHHHHHHHHH
Confidence 4899999999999999999999999999999987654332 2233211112479999998753 368899999999
Q ss_pred HHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCc-cCcccHHHHHHhcCC--CCcEE
Q 022685 93 SVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNK-YSHASSFARIMEGGY--ARRLL 169 (293)
Q Consensus 93 ~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~-~~~g~~~~~~~~~~~--~~~~v 169 (293)
.++.+++++ .+||+|||||++|||.++++++++ +++|||||||+|+++++.|.. ++|||||+++++++. +++++
T Consensus 108 ~v~~~l~~g-~~pi~lGGdHsit~~~~~al~~~~--~l~vI~~DAH~Dl~~~~~g~~g~~hG~~~~~~~~~~~~~~~~~~ 184 (326)
T 3niq_A 108 FYRQVHAAG-TLPLSVGGDHLVTLPIFRALGRER--PLGMVHFDAHSDTNDRYFGDNPYTHGTPFRRAIEEGLLDPLRTV 184 (326)
T ss_dssp HHHHHHHTT-CEEEEEESSGGGHHHHHHHHTSSS--CEEEEEECSSCCCCCCBTTTBCCSTTSHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHhCC-CEEEEeCCcchhhHHHHHHHHhhC--CeeEEEccCcccccCCCCCCCCCcCchHHHHHHhccCCCCceEE
Confidence 999999887 799999999999999999998764 899999999999999887765 899999999999875 48999
Q ss_pred EEcccCC--ChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHH
Q 022685 170 QVGIRSI--TKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD 245 (293)
Q Consensus 170 ~iG~r~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~e 245 (293)
+||+|+. +++|++++++.|++++++.++.+. ..+++.+....+..+||||||+|||||+++|||++|+|||||++|
T Consensus 185 ~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~e 264 (326)
T 3niq_A 185 QIGIRGSVYSPDDDAFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAPGTGTPEIGGMTSLQ 264 (326)
T ss_dssp EEEECSCCSCTTSTHHHHHHTCEEEEHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEGGGBCTTTCCCCSSCCSSCBCHHH
T ss_pred EEeecCCCCCHHHHHHHHHCCCEEEEHHHhhhcCHHHHHHHHHHHhCCCeEEEEEeccccCHhhCCCCCCCCCCCCCHHH
Confidence 9999995 688999999999999999998764 344444431123468999999999999999999999999999999
Q ss_pred HHHHHHhhcC-CeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 246 VLNILHNLQA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 246 l~~~l~~i~~-~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
++++++.++. +++|+||||+||.+|. +++|+.+||+++++++.++++
T Consensus 265 ~~~~l~~l~~~~vvg~DivEv~P~~D~-~~~Ta~laA~li~~~l~~~~~ 312 (326)
T 3niq_A 265 AQQLVRGLRGLDLVGADVVEVSPPFDV-GGATALVGATMMFELLCLLAE 312 (326)
T ss_dssp HHHHHHTTTTSCEEEEEEECCCGGGCS-TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEEECCCcCC-CCcHHHHHHHHHHHHHHHHHh
Confidence 9999999965 8999999999999996 589999999999999998763
No 5
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=100.00 E-value=4.6e-64 Score=459.89 Aligned_cols=272 Identities=29% Similarity=0.482 Sum_probs=229.0
Q ss_pred ccCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHHH
Q 022685 12 AVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVIT 91 (293)
Q Consensus 12 ~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~ 91 (293)
-+++|+|+|+|||.|+++|+|+++||+|||++++.+..+.. +.+.+..+...++|+||+...+ .+.++++++++
T Consensus 28 ~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~l~~~~~-~~~~~~~~~~~i~D~Gdv~~~~-----~~~~~~~~~i~ 101 (313)
T 1gq6_A 28 RGYDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGI-DRGPGTFDLINCVDAGDINLTP-----FDMNIAIDTAQ 101 (313)
T ss_dssp CSCSEEEEEECCCTTCSSCCCGGGHHHHHHHHHTTCCSCCS-SCCSCHHHHSCEEEEEECCCCS-----SCHHHHHHHHH
T ss_pred CCCCEEEEEeecCCCCCcCchHHHHHHHHHHHhccCcccCc-ccccCcccCCeEEeCCCcCCCC-----CCHHHHHHHHH
Confidence 35889999999999999999999999999999987543221 1222211112478999998754 26789999999
Q ss_pred HHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CCcEE
Q 022685 92 ESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLL 169 (293)
Q Consensus 92 ~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~~~v 169 (293)
+.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|+++++.|+.++|||||+++++++. +++++
T Consensus 102 ~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~~-~~~~vI~~DAH~Dl~~~~~g~~~~hG~~~~~~~~~~~~~~~~~~ 179 (313)
T 1gq6_A 102 SHLSGLLKAN-AAFLMIGGDHSLTVAALRAVAEQH-GPLAVVHLDAHSDTNPAFYGGRYHHGTPFRHGIDEKLIDPAAMV 179 (313)
T ss_dssp HHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHHH-SSEEEEEECSSCCCCCCBTTBTTCTTCHHHHHHHTTSEEEEEEE
T ss_pred HHHHHHHhCC-CEEEEeCCcchhhHHHHHHHHHHc-CCeEEEEEeCCCcCCCccCCCCCcCcCHHHHhhhccCCCCCcEE
Confidence 9999999887 799999999999999999999988 5899999999999999988888999999999999764 57999
Q ss_pred EEcccC--CChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHH
Q 022685 170 QVGIRS--ITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD 245 (293)
Q Consensus 170 ~iG~r~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~e 245 (293)
+||+|+ .+++|++++++.++++++++++.+. .++++.+....+.++||||||+|||||+++|||++|+|||||++|
T Consensus 180 ~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~e 259 (313)
T 1gq6_A 180 QIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSRE 259 (313)
T ss_dssp EEEECCC------CHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGBCTTTCCSBSSCCSSCBCHHH
T ss_pred EEEecCCCCCHHHHHHHHHcCCEEEEHHHHhhcCHHHHHHHHHHHcCCCeEEEEEeecCcCcccCCCCCCCCCCCCCHHH
Confidence 999996 5889999999999999999988653 344554432123579999999999999999999999999999999
Q ss_pred HHHHHHhhc-CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhh
Q 022685 246 VLNILHNLQ-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKIS 292 (293)
Q Consensus 246 l~~~l~~i~-~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~ 292 (293)
++++++.+. .+++|+||||+||.+|. +++|+.+||+++++++..++
T Consensus 260 ~~~~l~~l~~~~vvg~DivE~~P~~D~-~~~Ta~~aa~li~~~l~~~~ 306 (313)
T 1gq6_A 260 VLALLRCVGDLKPVGFDVMEVSPLYDH-GGITSILATEIGAELLYQYA 306 (313)
T ss_dssp HHHHGGGGGGSEEEEEEEECBCGGGCS-TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCeEEEEEEEECCCcCC-CChHHHHHHHHHHHHHHHHH
Confidence 999999985 48999999999999996 57999999999999999875
No 6
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=100.00 E-value=2.5e-64 Score=460.03 Aligned_cols=264 Identities=33% Similarity=0.516 Sum_probs=232.7
Q ss_pred cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHHHH
Q 022685 13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITE 92 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~~ 92 (293)
+++|+|+|+|||.|+++|+|+++||+|||++++++..+. .+.+.++.++ .++|+||+.+. .+.+++++++++
T Consensus 34 ~~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~-~~~~~~~~~~-~i~D~Gdv~~~------~~~~~~~~~i~~ 105 (313)
T 3pzl_A 34 EAKYVVFGIPFDNTSSYRRGSKYAPDSIRGAYVNLESYE-YSYGIDLLAS-GMADLGDMEES------EDVEYVIDTVES 105 (313)
T ss_dssp GCSEEEEEECCCTTCCSCCCGGGHHHHHHHHHTTSCSEE-TTTTEEGGGS-CEEEEEECCCC------SCHHHHHHHHHH
T ss_pred CCCEEEEEeecCCCCCCCchHHHHHHHHHHHHhccCccC-cccCCCccCC-ceeeccCCCCC------CCHHHHHHHHHH
Confidence 479999999999999999999999999999998765432 2233333333 47999999862 368999999999
Q ss_pred HHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCCCCcEEEEc
Q 022685 93 SVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVG 172 (293)
Q Consensus 93 ~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~~~~~v~iG 172 (293)
.++.+++++ .+||+|||||++|||.+++++ ++++|||||||+|+++++.|+.++||||++++++.+.++++++||
T Consensus 106 ~v~~~l~~g-~~PivlGGdHsit~~~~~a~~----~~l~vI~~DAH~Dl~~~~~g~~~shgt~~~~~~e~~~~~~~~~iG 180 (313)
T 3pzl_A 106 VVSAVMSDG-KIPIMLGGEHSITVGAVRALP----KDVDLVIVDAHSDFRSSYMGNKYNHACVTRRALDLLGEGRITSIG 180 (313)
T ss_dssp HHHHHHHTT-CEEEEEESSGGGHHHHHTTCC----SSEEEEEECSBCCCCSCBTTBTTSTTSHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHhCC-CEEEEECCchHHHHHHHHHhc----cCCcEEEecCccccccccCCCCcCcHHHHHHHHhcCCCCeEEEEe
Confidence 999999887 799999999999999999986 379999999999999988888899999999999876678999999
Q ss_pred ccCCChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHHHHHHH
Q 022685 173 IRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNIL 250 (293)
Q Consensus 173 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~el~~~l 250 (293)
+|+.+++|++++++.+++++++.++... .++++.++. . .++||||||+|||||+++|||++|+|||||++|++.++
T Consensus 181 iR~~~~~e~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~-~-~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~e~~~il 258 (313)
T 3pzl_A 181 IRSVSREEFEDPDFRKVSFISSFDVKKNGIDKYIEEVDR-K-SRRVYISVDMDGIDPAYAPAVGTPEPFGLADTDVRRLI 258 (313)
T ss_dssp ECBCCHHHHTSGGGGGSEEEEHHHHHHHCSHHHHHHHHH-H-CSEEEEEEEGGGBCTTTCTTBSSCCSSCBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHCCCEEEEHHHHhhhhHHHHHHHHhc-c-CCeEEEEEeccccChhhCCCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999998753 456666642 2 27999999999999999999999999999999999999
Q ss_pred HhhcCCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 251 HNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 251 ~~i~~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
+.+..+++|+||||+||.+|. ++|+.+||+|+++++..++|
T Consensus 259 ~~l~~~vvg~DivEv~P~~D~--~~Ta~laA~li~~~l~~~~~ 299 (313)
T 3pzl_A 259 ERLSYKAVGFDIVEFSPLYDN--GNTSMLAAKLLQVFIASREK 299 (313)
T ss_dssp HHHGGGEEEEEEECBCGGGSS--SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCeEEEEEEEECCCcCC--CHHHHHHHHHHHHHHHHHHH
Confidence 999669999999999999984 69999999999999998764
No 7
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=100.00 E-value=8.7e-64 Score=456.37 Aligned_cols=269 Identities=32% Similarity=0.475 Sum_probs=231.8
Q ss_pred ccCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCC-CcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHHH
Q 022685 12 AVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS-TTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVI 90 (293)
Q Consensus 12 ~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~-~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i 90 (293)
.+++|+|+|+|||.|+++|+|+++||+|||++++.+.... .......+... .++|+||+.+.+ .+.+++++++
T Consensus 27 ~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~-~v~D~Gdv~~~~-----~~~~~~~~~i 100 (305)
T 1woh_A 27 WQADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGV-TFADAGDVILPS-----LEPQLAHDRI 100 (305)
T ss_dssp CCEEEEEEEECCCTTCSSCCCGGGHHHHHHHHHTTSCSCEECTTSCEESTTC-CEEEEEECCCCS-----SCHHHHHHHH
T ss_pred CCCCEEEEEeecCCCCCcCcHHHHHHHHHHHHhhccCccccCccccCCcccC-ceEeCCCccCCC-----CCHHHHHHHH
Confidence 4678999999999999999999999999999998753110 00001123333 478999998754 3688999999
Q ss_pred HHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHh-cCCCCcEE
Q 022685 91 TESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIME-GGYARRLL 169 (293)
Q Consensus 91 ~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~-~~~~~~~v 169 (293)
++.++.+++++ .+||+|||||++|+|.+++++++ ++++|||||||+|+++++.|+.++|||||+++++ .+..++++
T Consensus 101 ~~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~--~~~~vI~~DAH~Dl~~~~~g~~~~hG~~~~~~~~~~~~~~~~~ 177 (305)
T 1woh_A 101 TEAARQVRGRC-RVPVFLGGDHSVSYPLLRAFADV--PDLHVVQLDAHLDFTDTRNDTKWSNSSPFRRACEALPNLVHIT 177 (305)
T ss_dssp HHHHHHHHTTE-EEEEEEESSGGGHHHHHGGGTTS--TTEEEEEECSSCCCCSCBTTBSCSTTCHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHhCC-CeEEEECCCccchHHHHHHHHhc--CCeEEEEEeCCcccCcccCCCCCCChhHHHHHhhccCCCCcEE
Confidence 99999999877 79999999999999999999876 5899999999999999988888999999999999 77667999
Q ss_pred EEcccCC--ChhhHHHHHhcCceEEecccccch-HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHHH
Q 022685 170 QVGIRSI--TKEGREQGKRFGVEQYEMRTFSRD-RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDV 246 (293)
Q Consensus 170 ~iG~r~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~el 246 (293)
+||+|+. +++|++++++.++++++++++... +.+++.+. +.++||||||+|||||+++|||++|+|||||++|+
T Consensus 178 ~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~~~~v~~~~~---~~~~vylSiDiDvlDpa~aPgtgtp~pgGlt~~e~ 254 (305)
T 1woh_A 178 TVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLP---RGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQG 254 (305)
T ss_dssp EEEECCSCCCHHHHHHHHHTTCEEEEHHHHHHCHHHHHTTSC---CSSEEEEEEEGGGBCTTTCCCBSSCCSSCBCHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHcCCeEEEHHHHHHHHHHHHHHhh---CCCcEEEEEeecCCChhhCCCCCCCCCCCCCHHHH
Confidence 9999997 889999999999999999988653 23444432 56799999999999999999999999999999999
Q ss_pred HHHHHhhc--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 247 LNILHNLQ--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 247 ~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
+++++.+. .+++|+||||++|.+|. +++|+.+||+++++++.++.+
T Consensus 255 ~~~l~~l~~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~~~ 302 (305)
T 1woh_A 255 MKILAAAAANNTVVGLDLVELAPNLDP-TGRSELLMARLVMETLCEVFD 302 (305)
T ss_dssp HHHHHHHHHHSEEEEEEEECBCGGGCT-TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEEEEEECCCCCC-CChHHHHHHHHHHHHHHHHHh
Confidence 99999994 69999999999999996 579999999999999998753
No 8
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis}
Probab=100.00 E-value=1.2e-63 Score=458.10 Aligned_cols=264 Identities=30% Similarity=0.499 Sum_probs=223.6
Q ss_pred cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCccc--CCC-CCCCCcccccCCcccccccCCCCCHHHHHHH
Q 022685 13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEE--GKE-LNDPRVLTDVGDVPVQEIRDCGVDDDRLMNV 89 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~--~~~-~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~ 89 (293)
+++|+|+|+|||.|+++|+|+++||+|||++++.+. +. .+. +.+ +.. ..++|+||+.+.+ .+.++++++
T Consensus 46 ~~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~-~~-~~~~~~~~~~~~-~~v~D~Gdv~~~~-----~~~~~~~~~ 117 (324)
T 4dz4_A 46 GVDVVVSGVPLDLATTFRSGARLGPSAVRAASVQLA-EL-NPYPWGFDPFDD-LAVIDYGDCWFDA-----HHPLSIKPA 117 (324)
T ss_dssp TCSEEEEEECCCTTCSSCCCGGGHHHHHHHHTTTTT-TS-CCTTTCSCGGGT-SCEEEEEECCCCT-----TSGGGHHHH
T ss_pred CCCEEEEecccCCCCCCCchHHHHHHHHHHHhcccc-cc-cccccCcCcccc-CceEecCCCCCCC-----CCHHHHHHH
Confidence 479999999999999999999999999999998752 21 122 221 222 3489999998753 256889999
Q ss_pred HHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CCc
Q 022685 90 ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARR 167 (293)
Q Consensus 90 i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~~ 167 (293)
+++.++.+++++ .+||+|||||++|||.+++++++++++++|||||||+|+++++.|..++|||||+++++++. +++
T Consensus 118 i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~~~~~l~vI~~DAH~Dl~~~~~g~~~~hG~~~~~~~~~~~~~~~~ 196 (324)
T 4dz4_A 118 IVEHARTILQSD-ARMLTLGGDHYITYPLLIAHAQKYGKPLSLIHFDAHCDTWADDAPDSLNHGTMFYKAVKDGLIDPKA 196 (324)
T ss_dssp HHHHHHHHHTTT-CEEEEEESSGGGHHHHHHHHHHHHCSSBEEEEECSSCCCCCCC---CCCTTTHHHHHHHTTSBCGGG
T ss_pred HHHHHHHHHHCC-CEEEEeCCcchhhHHHHHHHHHhcCCCcEEEEccCcccccCCCCCCCCCChhHHHHHhhCCCCCCce
Confidence 999999999877 79999999999999999999998855899999999999999887777899999999999874 489
Q ss_pred EEEEcccCCChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHH
Q 022685 168 LLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD 245 (293)
Q Consensus 168 ~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~e 245 (293)
+++||+|+.+ +++.++++++++++.+. .++++++....+.++||||||+|||||+++|||++|+|||||++|
T Consensus 197 ~~~iGiR~~~------~~~~g~~~~~~~~i~~~g~~~v~~~~~~~~~~~~vylS~DiDvlDpa~aPgtgtp~pgGlt~~e 270 (324)
T 4dz4_A 197 SVQVGIRTWN------DDYLGINVLDAAWVHEHGARATLERIESIVGGRPAYLTFDIDCLDPAFAPGTGTPVAGGLSSAQ 270 (324)
T ss_dssp CEEEEECSCC------SCCTTCEEEEHHHHHHHCHHHHHHHHHHHHTTSCEEEEEEGGGBCTTTCCSSSSCCSSCBCHHH
T ss_pred EEEEeCCcch------HHHCCCEEEEHHHhhhcCHHHHHHHHHHHcCCCcEEEEEecCccCHhhCCCCCCCCCCCCCHHH
Confidence 9999999987 46789999999988753 344554432123468999999999999999999999999999999
Q ss_pred HHHHHHhhc-CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhh
Q 022685 246 VLNILHNLQ-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKIS 292 (293)
Q Consensus 246 l~~~l~~i~-~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~ 292 (293)
++.+++.+. .+++|+||||+||.+|. +++|+.+||+++++++.++.
T Consensus 271 ~~~~l~~l~~~~vvg~DivEv~P~~D~-~~~Ta~laA~li~~~l~~~~ 317 (324)
T 4dz4_A 271 ALAIVRGLGGVNLIGADVVEVAPAYDQ-SEITAIAAAHVACDLLCLWR 317 (324)
T ss_dssp HHHHHHTCTTSCEEEEEEECCCGGGCS-TTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEEEEEEECCccCC-CChHHHHHHHHHHHHHHHHH
Confidence 999999996 49999999999999996 58999999999999999875
No 9
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=100.00 E-value=5.2e-62 Score=446.37 Aligned_cols=268 Identities=20% Similarity=0.273 Sum_probs=226.1
Q ss_pred ccCcEEEEcccCCCCCC---CCCccchhhHHHHHHHhcCCC-CCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHH
Q 022685 12 AVASTSLLGVPLGHNSS---FLQGPAFAPPRIREAIWCGST-NSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLM 87 (293)
Q Consensus 12 ~~~~i~iiGvP~d~g~~---~r~Ga~~gP~aiR~a~~~~~~-~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~ 87 (293)
.+++|+|||+|||.|++ +|+|+++||+|||++|..+.. +. .+.+.++... .++|+||+.+. +.++++
T Consensus 28 ~~~~i~iiGvP~D~g~s~n~~r~Ga~~GP~aIR~as~~l~~~~~-~~~~~~~~~~-~v~D~Gdv~~~-------~~~~~~ 98 (316)
T 2a0m_A 28 EDADIVIIGFPYDEGCVRNGGRAGAKKGPAAFRFFLQRLGSVNN-LELNVDASHL-KLYDAGDITAS-------TLEEAH 98 (316)
T ss_dssp GGCSEEEEEECCCHHHHHTTCCSCGGGHHHHHHHHHTTCCBSEE-TTTTEECTTC-CEEEEEECCCS-------SHHHHH
T ss_pred CCCCEEEEEEecCCCcCCCCCCchHHHHHHHHHHHHhccCcccc-cccccCCCCC-cEEeCCCCCCC-------CHHHHH
Confidence 46889999999999987 999999999999999876541 11 1111122222 37899999763 578999
Q ss_pred HHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcC--CC
Q 022685 88 NVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGG--YA 165 (293)
Q Consensus 88 ~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~--~~ 165 (293)
+++++.++.+++++ .+||+|||||++|+|.+++++++++++++|||||||+|+++++.+..++|||||+++++.+ .+
T Consensus 99 ~~i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~~~~~~~vI~~DAH~Dl~~~~~~~~~~~G~~~~~~~~~~~~~~ 177 (316)
T 2a0m_A 99 EKLESKVFTVLARG-AFPFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLQDGRVHSGTPFRQLLEESSFSG 177 (316)
T ss_dssp HHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHHHHHHSTTCCEEEEECSSCCCCCCCTTSCCCTTCHHHHHHTCTTCCG
T ss_pred HHHHHHHHHHHhCC-CeEEEECCcchhhHHHHHHHHHHhCCCEEEEEEeccccccCcccCCCCCCCcHHHHHHHhccCCC
Confidence 99999999999887 7999999999999999999998875689999999999999984433678999999999964 36
Q ss_pred CcEEEEcccCCC--hhhHHHHHhcCceEEecccccch--HHHHHHhhccCCc-ceEEEEEeccccCCCCCCCCCCCCCCC
Q 022685 166 RRLLQVGIRSIT--KEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGV-KGVYISVDVDCLDPAFAPGVSHIEPGG 240 (293)
Q Consensus 166 ~~~v~iG~r~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~-~~vyvsiDiDvldps~~pg~~~p~pgG 240 (293)
+++++||+|+.+ +++++++++.|+++++++++.+. .+.++.+. ... ++||||||+|||||+++|||++|+|||
T Consensus 178 ~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~~v~~~l~~~~--~~~~~~vylS~DiDvLDpa~aPgtgtp~pGG 255 (316)
T 2a0m_A 178 KRFVEFACQGSQCGALHAQYVRDHQGHLMWLSEVRKKGAVAALEDAF--GLTGKNTFFSFDVDSLKSSDMPGVSCPAAVG 255 (316)
T ss_dssp GGEEEEEECTTTSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHH--HHHCSSEEEEEEGGGBBTTTCCCBSSCBSSC
T ss_pred ceEEEEEeCCCCCCHHHHHHHHHcCCeEEEHHHHhhhHHHHHHHHHH--hhCCCeEEEEEccccCccccCCCCCCCCCCC
Confidence 899999999864 67789999999999999988641 12333322 112 689999999999999999999999999
Q ss_pred CCHHHHHHHHHhh-c-CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 241 LSFRDVLNILHNL-Q-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 241 lt~~el~~~l~~i-~-~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
||++|++.+++.+ . .+++|+||||++|.+|. + +|+.+||+++++++.++++
T Consensus 256 lt~~e~~~il~~l~~~~~vvg~DivEv~P~~D~-~-~Ta~laa~li~~~l~~~~~ 308 (316)
T 2a0m_A 256 LSAQEAFDMCFLAGKTPTVMMMDMSELNPLVEE-Y-RSPRVAVYMFYHFVLGFAT 308 (316)
T ss_dssp BCHHHHHHHHHHHHHCTTEEEEEEECBCTTTCC-S-HHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEEEEECCCCCc-c-HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999 3 59999999999999996 5 9999999999999998864
No 10
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1
Probab=100.00 E-value=7.3e-61 Score=442.40 Aligned_cols=263 Identities=21% Similarity=0.344 Sum_probs=227.1
Q ss_pred cCcEEEEcccCCCCCC---CCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHHH
Q 022685 13 VASTSLLGVPLGHNSS---FLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNV 89 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~---~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~ 89 (293)
+++|+|||+|||.|++ +|+|+++||+|||+++..+.. ++.. .++|+||+.+.+ .+.++++++
T Consensus 42 ~~~i~iiGvP~D~g~s~n~~r~Ga~~gP~aIR~a~~~l~~--------~~~~--~v~D~Gdi~~~~-----~~~~~~~~~ 106 (336)
T 1xfk_A 42 EPGVALIGFECDAGVERNKGRTGAKHAPSLIKQALANLAW--------HHPI--PIYDLGNIRCEG-----DELEQAQQE 106 (336)
T ss_dssp CSCEEEEEEECCHHHHHTTCCCCGGGHHHHHHHHHHTSBC--------CSSC--CEEEEEEEECCT-----TCHHHHHHH
T ss_pred CCCEEEEEeccCCCcCCCCCCccHHHhHHHHHHHHHhCCc--------CCCC--cEEECCCccCCC-----cCHHHHHHH
Confidence 3789999999999986 999999999999999986531 1122 478999998754 368899999
Q ss_pred HHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHc------CCCEEEEEEccCCCCCCCCCC---CccCcccHHHHHH
Q 022685 90 ITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKL------GGPVDVLHLDAHPDIYDAFEG---NKYSHASSFARIM 160 (293)
Q Consensus 90 i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~------~~~i~vI~~DAH~D~~~~~~g---~~~~~g~~~~~~~ 160 (293)
+++.++.++++ .+||+|||||++|+|.++++++++ +++++|||||||+|+++++.| +.++|||||++++
T Consensus 107 i~~~v~~~l~~--~~pi~LGGdHsit~g~~~a~~~~~~~~~~~~~~l~vI~fDAH~Dl~~~~~g~~~~~~~hGt~~~~~~ 184 (336)
T 1xfk_A 107 CAQVIQQALPH--ARAIVLGGGHEIAWATFQGLAQHFLATGVKQPRIGIINFDAHFDLRTFESELAPVRPSSGTPFNQIH 184 (336)
T ss_dssp HHHHHHHHTTT--CCEEEECSSTTHHHHHHHHHHHHHHHTTCCSCCEEEEEECSSCCCCCSSCSSSCCCCCTTCHHHHHH
T ss_pred HHHHHHHHHHh--CCeEEEeCchhhhHHHHHHHHHHhccccccCCCEEEEEEecCccCCCCccCcCCCCCCCchHHHHHH
Confidence 99999999876 589999999999999999999887 368999999999999998776 4689999999999
Q ss_pred hc----CCCCcEEEEcccCCC--hhhHHHHHhcCceEEecccccch--HHHHHHhhc-cCCcceEEEEEeccccCCCCCC
Q 022685 161 EG----GYARRLLQVGIRSIT--KEGREQGKRFGVEQYEMRTFSRD--RQFLENLKL-GEGVKGVYISVDVDCLDPAFAP 231 (293)
Q Consensus 161 ~~----~~~~~~v~iG~r~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~-~~~~~~vyvsiDiDvldps~~p 231 (293)
+. ..++++++||+|+.+ +++++++++.+++++++.++.+. ..+++.+.. ..+.++||||||+|||||+++|
T Consensus 185 ~~~~~~~~~~~~~~iGiR~~~~~~~~~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~~l~~~~~vylSiDiDvLDpa~aP 264 (336)
T 1xfk_A 185 HFCQQQGWDFHYACLGVSRASNTPALFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASAP 264 (336)
T ss_dssp HHHHHHTCCCEEEEEEECTTTSCHHHHHHHHHTTCEEEEGGGCSTTTHHHHHHHHHHHHHTCSEEEEEEEGGGSBTTTCC
T ss_pred hhccccCCCceEEEEEeCCCCCCHHHHHHHHHcCCEEEEHHHHHhcCHHHHHHHHHHHhcCCCeEEEEEeeccCChhcCC
Confidence 84 357899999999864 46788999999999999998753 344444431 1235799999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHhh-c--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685 232 GVSHIEPGGLSFRDVLNILHNL-Q--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293 (293)
Q Consensus 232 g~~~p~pgGlt~~el~~~l~~i-~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~ 293 (293)
||++|+|||||++|++.+++.+ . .+|+|+||||+||.+|. +++|+.+||+|+++++.+++|
T Consensus 265 gtgtp~pgGlt~~e~~~~l~~l~~~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~~~ 328 (336)
T 1xfk_A 265 GVSAPAARGVSLEALAPYFDRILHYKNKLMIADIAEYNPSFDI-DQHTARLAARLCWDIANAMAE 328 (336)
T ss_dssp SSSSCBSSCCCHHHHHHHHHHHHHCTTTEEEEEEECCCGGGCS-TTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEEEEECCCCCC-cchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 5 59999999999999996 579999999999999998864
No 11
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=100.00 E-value=5.8e-60 Score=430.29 Aligned_cols=262 Identities=28% Similarity=0.406 Sum_probs=218.9
Q ss_pred cEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCC-C------C---CHH
Q 022685 15 STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDC-G------V---DDD 84 (293)
Q Consensus 15 ~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~-g------~---~~~ 84 (293)
+|+|+|+|||.| ++|+|+++||+|||+++..... ...+ ..++|+||+.+.+.+.. . . ..+
T Consensus 3 ~i~iiGvP~d~g-~~r~Ga~~gP~aiR~a~~~~~~---~~~~------~~v~D~Gdv~~~~~~~~~~~~~~~~~~~~~~~ 72 (299)
T 2cev_A 3 PISIIGVPMDLG-QTRRGVDMGPSAMRYAGVIERL---ERLH------YDIEDLGDIPIGKAERLHEQGDSRLRNLKAVA 72 (299)
T ss_dssp CEEEEEECCCTT-SSCTTGGGHHHHHHHTTHHHHH---HHTT------CCEEEEEECCCCCCCCTTTSSBTTBTTHHHHH
T ss_pred cEEEEEcccCCC-CCCccHHHHHHHHHHhcchhhH---hhcC------CeEEEecCcCCCCccccccccchhhhhHHHHH
Confidence 699999999999 6899999999999999753210 1111 13789999987543201 0 0 146
Q ss_pred HHHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCC-CCccCcccHHHHHHhcC
Q 022685 85 RLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFE-GNKYSHASSFARIMEGG 163 (293)
Q Consensus 85 ~~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~-g~~~~~g~~~~~~~~~~ 163 (293)
++++++++.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|+++++. ++.++||||++++++.+
T Consensus 73 ~~~~~i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~~~~~~~-~~~~vI~~DAH~Dl~~~~~~~sg~~hG~~~~~a~~~~ 150 (299)
T 2cev_A 73 EANEKLAAAVDQVVQRG-RFPLVLGGDHSIAIGTLAGVAKHY-ERLGVIWYDAHGDVNTAETSPSGNIHGMPLAASLGFG 150 (299)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHTTC-SSEEEEEESSBCCCCCTTTCSSCCGGGSHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhCC-CeEEEecCCcccchhhhHHHHhhC-CCeEEEEEecCCCcCCCCCCCCccccchHHHHHhhcC
Confidence 88999999999999887 799999999999999999999887 6899999999999999863 45567999999999864
Q ss_pred --------------CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHHHHHhh--ccCCcceEEEEEecccc
Q 022685 164 --------------YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLK--LGEGVKGVYISVDVDCL 225 (293)
Q Consensus 164 --------------~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~--~~~~~~~vyvsiDiDvl 225 (293)
.++++++||+|+.+++|++++++.++++++++++.+. ..+++.+. ...+.++||||||+|||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~l~~~~~~~~~vylSiDiDvl 230 (299)
T 2cev_A 151 HPALTQIGGYSPKIKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERTDGVHLSLDLDGL 230 (299)
T ss_dssp CHHHHTGGGCSCSSCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGB
T ss_pred chhccccccccccCCccceEEEECCCCCHHHHHHHHHcCCeEEEHHHHhhcCHHHHHHHHHHHhccCCCeEEEEEccCcc
Confidence 2479999999999999999999999999999988653 23333221 11235799999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHhhc--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHH
Q 022685 226 DPAFAPGVSHIEPGGLSFRDVLNILHNLQ--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTA 289 (293)
Q Consensus 226 dps~~pg~~~p~pgGlt~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~ 289 (293)
||+++|||++|+|||||++|++.+++.+. .+++|+||||+||.+|. +++|+.+||+++++++.
T Consensus 231 Dp~~aPgtgtp~pgGlt~~e~~~~l~~l~~~~~vvg~DivE~~P~~D~-~~~Ta~laa~li~~~l~ 295 (299)
T 2cev_A 231 DPSDAPGVGTPVIGGLTYRESHLAMEMLAEAQIITSAEFVEVNPILDE-RNKTASVAVALMGSLFG 295 (299)
T ss_dssp CTTTCCCCSSCCSSCBCHHHHHHHHHHHHHHTCEEEEEEECCCGGGSS-TTHHHHHHHHHHHHHTT
T ss_pred ChhhcCCCCCCCCCCCCHHHHHHHHHHHhcCCCEEEEEEEEECCCCCC-ccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999994 59999999999999996 57999999999999875
No 12
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=100.00 E-value=5.9e-60 Score=428.53 Aligned_cols=260 Identities=28% Similarity=0.410 Sum_probs=211.2
Q ss_pred cEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCC---------CCHHH
Q 022685 15 STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCG---------VDDDR 85 (293)
Q Consensus 15 ~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g---------~~~~~ 85 (293)
+|+|+|+|||.| ++|+|+++||+|||+++..... ...+ ..++|+||+.+.+.+... ...++
T Consensus 2 ~i~iiGvP~d~g-~~r~Ga~~gP~aiR~a~~~~~~---~~~~------~~v~D~Gdv~~~~~~~~~~~~~~~~~~~~~~~ 71 (290)
T 2ef5_A 2 RVAVVGVPMDLG-ANRRGVDMGPSALRYARLLEQL---EDLG------YTVEDLGDVPVSLARASRRRGRGLAYLEEIRA 71 (290)
T ss_dssp EEEEEEECCCCC------GGGHHHHHHHTTHHHHH---HHTT------CEEEEEEECCCCCT-----------THHHHHH
T ss_pred cEEEEEcccCCC-CCCccHHHhHHHHHHccchhhH---hhcC------CcEEECCCcCCCCcccccccchhhhhHHHHHH
Confidence 689999999999 6899999999999999753210 1111 237899999875432000 01457
Q ss_pred HHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCC-CCccCcccHHHHHHhcC-
Q 022685 86 LMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFE-GNKYSHASSFARIMEGG- 163 (293)
Q Consensus 86 ~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~-g~~~~~g~~~~~~~~~~- 163 (293)
+++++++.++. ++++ .+||+|||||++|+|.++++++ + ++++|||||||+|+++++. ++.++||||++++++.+
T Consensus 72 ~~~~i~~~v~~-l~~g-~~pi~lGGdHsit~~~~~a~~~-~-~~~~vi~~DAH~Dl~~~~~~~sg~~hG~~~~~~~~~~~ 147 (290)
T 2ef5_A 72 AALVLKERLAA-LPEG-VFPIVLGGDHSLSMGSVAGAAR-G-RRVGVVWVDAHADFNTPETSPSGNVHGMPLAVLSGLGH 147 (290)
T ss_dssp HHHHHHHHHHT-SCTT-EEEEEEESSGGGHHHHHHHHHT-T-SCCEEEEECSBCCCCCTTTC-CCCGGGSHHHHHTTCSC
T ss_pred HHHHHHHHHHH-hhcC-ceEEEEcCcccchHHHHHHHhc-C-CCeEEEEEecCcccCCCCCCCCCcccccHHHHHhcCCc
Confidence 88899999999 8776 7999999999999999999998 4 6999999999999999864 45678999999999875
Q ss_pred ----------CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCC
Q 022685 164 ----------YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAP 231 (293)
Q Consensus 164 ----------~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~p 231 (293)
.+++++++|+|+.+++|++++++.++++++++++.+. ..+++.+....+.++||||||+|||||+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~l~~~~vylSiDiDvlDp~~aP 227 (290)
T 2ef5_A 148 PRLTEVFRAVDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDRLGVARIAEEVLKHLQGLPLHVSLDADVLDPTLAP 227 (290)
T ss_dssp HHHHHHHCCCCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHTTTSCEEEEEEGGGBCTTTCC
T ss_pred hhccccccccCcccEEEEECCCCCHHHHHHHHHcCCeEEEHHHHHhcCHHHHHHHHHHhcCCCcEEEEEccCCCChhhCC
Confidence 2579999999999999999999999999999988653 2334333211125799999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhc--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHH
Q 022685 232 GVSHIEPGGLSFRDVLNILHNLQ--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTA 289 (293)
Q Consensus 232 g~~~p~pgGlt~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~ 289 (293)
||++|+|||||++|++++++.+. .+++|+||||+||.+|. +++|+.+||+++++++.
T Consensus 228 gtgtp~pgGlt~~e~~~~l~~l~~~~~vvg~DivE~~P~~D~-~~~Ta~laa~li~~~l~ 286 (290)
T 2ef5_A 228 GVGTPVPGGLTYREAHLLMEILAESGRVQSLDLVEVNPILDE-RNRTAEMLVGLALSLLG 286 (290)
T ss_dssp CCSSCCSSCBCHHHHHHHHHHHHHHTCEEEEEEECCCTTTCS-TTHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcCCCEEEEEEEEECCCCCC-ccHHHHHHHHHHHHHHh
Confidence 99999999999999999999994 59999999999999996 57999999999999875
No 13
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=100.00 E-value=2.5e-59 Score=430.16 Aligned_cols=267 Identities=20% Similarity=0.311 Sum_probs=214.3
Q ss_pred EEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccC-CcccccccCCCCCHHHHH-HHHHHH
Q 022685 16 TSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVG-DVPVQEIRDCGVDDDRLM-NVITES 93 (293)
Q Consensus 16 i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~G-dv~~~~~~~~g~~~~~~~-~~i~~~ 93 (293)
++|||+|+|.|++ |+|+++||+|||+++....... .+ ++.++ .+.|+| |+.....+.. .+.++++ +++++.
T Consensus 1 ~aiiGvP~D~G~~-r~G~~~GP~aiR~a~~~~~~~~---~~-~~~~~-~~~d~~~d~~~~~~~~~-~~v~~~~~~~l~~~ 73 (330)
T 4g3h_A 1 MILVGLEAELGAS-KRGTDKGVRRLREALSATHGDV---IK-GMQTI-TQERCVLYKEFRYAKNF-EDYYLFCKENLIPC 73 (330)
T ss_dssp CEEEEEEETTTGG-GCHHHHHHHHHHHHHHHTTTSE---ET-TEESC-CEEEEEEECCCCGGGTH-HHHHHHHHHTHHHH
T ss_pred CEEEEEecCCCCC-CCChhhCHHHHHHHHhhhchhh---cC-ccccc-cccccCCcCccccccCH-HHHHHHHHHHHHHH
Confidence 5899999999986 9999999999999998643221 11 11122 255666 5543221000 1234567 999999
Q ss_pred HHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcC-CCEEEEEEccCCCCCCCCC-CCccCcccHHHHHHhc---------
Q 022685 94 VKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLG-GPVDVLHLDAHPDIYDAFE-GNKYSHASSFARIMEG--------- 162 (293)
Q Consensus 94 v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~-~~i~vI~~DAH~D~~~~~~-g~~~~~g~~~~~~~~~--------- 162 (293)
++++++++ .+||+||||||+|+|.++|++++++ ++++|||||||+|+++++. ++.++|||||+++++.
T Consensus 74 v~~il~~g-~~PivLGGdHsia~g~i~a~~~~~~~~~lgvI~~DAH~Dl~~~~~~~sg~~HG~p~~~~lg~~~~~~~~~~ 152 (330)
T 4g3h_A 74 MKEVFEKK-EFPLILSSEHANMFGIFQAFRSVHKDKKIGILYLDAHADIHTAYDSDSKHIHGMPLGMVLNRVRSGFNRMS 152 (330)
T ss_dssp HHHHHTSS-SCEEEECSSGGGHHHHHHHHHHHTTTSCEEEEEECSBCCSSCBC------CBCCHHHHHTTCCC----CCC
T ss_pred HHHHHHCC-CEEEEECCcchhhHHHHHHHHHhCCCCceEEEEeCCCcccCCCccCCCCCccccHHHHHhhcccccccccc
Confidence 99999877 7999999999999999999999885 4799999999999999875 4668899999977632
Q ss_pred -----------------C----CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHHHHHhhc-cCCcceEEE
Q 022685 163 -----------------G----YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKL-GEGVKGVYI 218 (293)
Q Consensus 163 -----------------~----~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~-~~~~~~vyv 218 (293)
+ .+++++|||+|+++++|++++++.|+++++++++ +. ..+++.+.. ..+.++|||
T Consensus 153 ~~~~~~~~~l~~~~~~~~~~~~~~~~~v~iGiR~~~~~e~~~~~~~gi~~~~~~ei-~~g~~~v~~~~~~~l~~~~~vyl 231 (330)
T 4g3h_A 153 ESEEKAWQKLCSLGLEKGGLEIDPKCLVYFGVRSTEQSERDVIRELQIPLFSVDAI-RENMQEVVQKTKESLKAVDIIYL 231 (330)
T ss_dssp HHHHHHHHHHHTTTCTTCCCCCCGGGEEEESCCBCCHHHHHHHHHHTCCEECHHHH-HHCHHHHHHHHHHHHTTCSEEEE
T ss_pred cccchhhhhhhhhcccCccccCCcccEEEEecCCCCHHHHHHHHHcCCeEEEHHHh-hcCHHHHHHHHHHHhcCCCeEEE
Confidence 2 2589999999999999999999999999999998 43 344544431 124579999
Q ss_pred EEeccccCCCCCCCCCCCCCCCCCHHHHHHHHHhh-c---CCeeEEEEeeecCCCCCCC--CHHHHHHHHHHHHHHHhhh
Q 022685 219 SVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNL-Q---ADVVAADVVEFNPQRDTVD--GMTAMVAAKLVRELTAKIS 292 (293)
Q Consensus 219 siDiDvldps~~pg~~~p~pgGlt~~el~~~l~~i-~---~~vvg~Di~E~~P~~d~~~--~~t~~laa~l~~~~~~~~~ 292 (293)
|||+|||||+++|||++|+|||||++|++.+++.+ . .+++|+||||+||.+|. + ++|+.+||+|+++++.++.
T Consensus 232 S~DiDvLDpa~aPgtgtP~pgGlt~~e~~~il~~l~~~~~~~vvg~DivEvnP~~D~-~~~~~TA~laa~li~~~l~~l~ 310 (330)
T 4g3h_A 232 SLDLDIMDGKLFTSTGVRENNGLSFDELKQLLGLLLESFKDRLKAVEVTEYNPTVSI-KHNNEEEKQVLEILDLIINSCK 310 (330)
T ss_dssp EEEGGGBCTTTCCSSSSCCSSCBCHHHHHHHHHHHHHHTTTTEEEEEEECCCGGGCC-CCSSHHHHHHHHHHHHHHHHHC
T ss_pred EEecCcCChhhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEEEEEECccccC-CccCHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998 3 49999999999999996 5 8999999999999999875
No 14
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=100.00 E-value=7.6e-59 Score=426.87 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=219.8
Q ss_pred cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCC---C-----CCHH
Q 022685 13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDC---G-----VDDD 84 (293)
Q Consensus 13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~---g-----~~~~ 84 (293)
.++|+|||+|||.|++ |+|+++||+|||+++.... ....+ ..++|+||+.+.+.+.. + .+.+
T Consensus 5 ~~~i~iiGvP~d~g~~-r~Ga~~GP~aiR~a~l~~~---~~~~~------~~v~D~Gdv~~~~~~~~~~~~~~~~~~~~~ 74 (322)
T 2aeb_A 5 SRTIGIIGAPFSKGQP-RGGVEEGPTVLRKAGLLEK---LKEQE------CDVKDYGDLPFADIPNDSPFQIVKNPRSVG 74 (322)
T ss_dssp CCEEEEEEECCCTTSS-CGGGGGHHHHHHHTTHHHH---HHHTT------CEEEEEEECCCCCCSCCCCBTTBCSHHHHH
T ss_pred CCCEEEEEcccCCCCC-cchHHHHHHHHHHccchhh---HHhcC------CceeeccccccCCccccccchhhhhhhHHH
Confidence 4689999999999986 9999999999999975311 00111 23789999987543110 0 1367
Q ss_pred HHHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCC-CCCccCcccHHHHHH-hc
Q 022685 85 RLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAF-EGNKYSHASSFARIM-EG 162 (293)
Q Consensus 85 ~~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~-~g~~~~~g~~~~~~~-~~ 162 (293)
++++++++.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|++++. .++.+.||||+++++ +.
T Consensus 75 ~~~~~i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~a~~~~~-~~~~vI~~DAH~Dl~~~~~~~sg~~hG~~~~~a~~~~ 152 (322)
T 2aeb_A 75 KASEQLAGKVAEVKKNG-RISLVLGGDHSLAIGSISGHARVH-PDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKEL 152 (322)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHHHHHHC-TTCEEEEESSSCCCCCTTTCSSCCGGGCHHHHHBGGG
T ss_pred HHHHHHHHHHHHHHhCC-CeEEEecCccccchHHHHHHHhhC-CCEEEEEEecCcccCCCCCCCCCccccHHHHHHHhcc
Confidence 88999999999999887 799999999999999999999987 589999999999999864 344567999999999 54
Q ss_pred C----------------CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHHH----HHhhccCCcceEEEEE
Q 022685 163 G----------------YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFL----ENLKLGEGVKGVYISV 220 (293)
Q Consensus 163 ~----------------~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l----~~l~~~~~~~~vyvsi 220 (293)
+ .++++++||+|+++++|++++++.+++++++.++.+. ..++ +.+. ..+.++|||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~-~~~~~~vylSi 231 (322)
T 2aeb_A 153 KGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLL-GRKKRPIHLSF 231 (322)
T ss_dssp TTTSCCCTTCTTCCCCBCGGGEEEEEECCCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHH-SSSCCCEEEEE
T ss_pred ccccccccccccccccCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEHHHHHhhCHHHHHHHHHHHHh-hcCCCeEEEEE
Confidence 2 2479999999999999999999999999999988643 2233 3331 12457899999
Q ss_pred eccccCCCCCCCCCCCCCCCCCHHHHHHHHHhhc--CCeeEEEEeeecCCCCCCCCH---HHHHHHHHHHHHHHhh
Q 022685 221 DVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ--ADVVAADVVEFNPQRDTVDGM---TAMVAAKLVRELTAKI 291 (293)
Q Consensus 221 DiDvldps~~pg~~~p~pgGlt~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~---t~~laa~l~~~~~~~~ 291 (293)
|+|||||+++|||++|+|||||++|++.+++.+. .+++|+||||+||.+|+.+++ |+.+||+++++++...
T Consensus 232 DiDvLDpa~aPgtgtp~pgGlt~~e~~~~l~~l~~~~~vvg~DivEv~P~~D~~~~~~~~Ta~laa~li~~~l~~~ 307 (322)
T 2aeb_A 232 DVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLA 307 (322)
T ss_dssp EGGGBCTTTCCSBSSCCSSCBCHHHHHHHHHHHHHHSCEEEEEEECBCGGGCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCcCCccccCCCCCCCCCCCCHHHHHHHHHHHHccCCEEEEEEEEECCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999994 599999999999999932467 9999999999998753
No 15
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=100.00 E-value=5.8e-59 Score=424.99 Aligned_cols=263 Identities=24% Similarity=0.389 Sum_probs=217.3
Q ss_pred cEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCC----C-----CCHHH
Q 022685 15 STSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDC----G-----VDDDR 85 (293)
Q Consensus 15 ~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~----g-----~~~~~ 85 (293)
+|+|+|+|||.|++ |+|+++||+|||+++.... ....+ ..++|+||+.+.+.+.. + .+.++
T Consensus 2 ~i~iiGvP~d~g~~-r~Ga~~gP~aiR~a~l~~~---~~~~~------~~v~D~Gdv~~~~~~~~~~~~~~~~~~~~~~~ 71 (306)
T 1pq3_A 2 SVAVIGAPFSQGQK-RKGVEHGPAAIREAGLMKR---LSSLG------CHLKDFGDLSFTPVPKDDLYNNLIVNPRSVGL 71 (306)
T ss_dssp EEEEEEECCCTTSS-CTTGGGHHHHHHTTTHHHH---HHHHT------CEEEEEEECCCCCCSSCCCBTTTBCSHHHHHH
T ss_pred cEEEEEcccCCCCC-CchHHHHHHHHHHhccHhH---HHhcC------CeEEecCccccCCcccccccchhhhcHHHHHH
Confidence 68999999999986 9999999999999964211 00111 23789999987543210 0 03678
Q ss_pred HHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCC-CCCccCcccHHHHHH-hc-
Q 022685 86 LMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAF-EGNKYSHASSFARIM-EG- 162 (293)
Q Consensus 86 ~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~-~g~~~~~g~~~~~~~-~~- 162 (293)
+++++++.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|++++. .++.+.||||+++++ +.
T Consensus 72 ~~~~i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~~~~~~~-~~~~vI~~DAH~Dl~~~~~~~sg~~hG~~~~~~~~~~~ 149 (306)
T 1pq3_A 72 ANQELAEVVSRAVSDG-YSCVTLGGDHSLAIGTISGHARHC-PDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQ 149 (306)
T ss_dssp HHHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHHHTTC-TTCEEEEECSSCCCCCTTTCSSCCGGGCHHHHHCTTTG
T ss_pred HHHHHHHHHHHHHhCC-CeEEEEcCcccchHhHHHHHHhhC-CCeEEEEEecCcccCCCCCCCCCcccchHHHHHHhccC
Confidence 8999999999999887 799999999999999999999887 589999999999999864 344567999999999 53
Q ss_pred -------C--------CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHH----HHHhhccCCcceEEEEEe
Q 022685 163 -------G--------YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQF----LENLKLGEGVKGVYISVD 221 (293)
Q Consensus 163 -------~--------~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----l~~l~~~~~~~~vyvsiD 221 (293)
+ .++++++||+|+++++|++++++.+++++++.++.+. ..+ ++.+. ..+.++||||||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~-~~~~~~vylSiD 228 (306)
T 1pq3_A 150 DKVPQLPGFSWIKPCISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLI-GKRQRPIHLSFD 228 (306)
T ss_dssp GGSCCCTTCTTCCCCSCGGGEEEESCCCCCHHHHHHHHHTTCEEECHHHHHHHCHHHHHHHHHHHHH-SSSCCCEEEEEE
T ss_pred cccccccccccccCcCCcccEEEEEcCCCCHHHHHHHHHcCCeEEEhHHHhhhCHHHHHHHHHHHHh-hcCCCeEEEEEe
Confidence 1 2579999999999999999999999999999988642 223 33332 134578999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCHHHHHHHHHhhc--CCeeEEEEeeecCCCCCCCCH---HHHHHHHHHHHHHHh
Q 022685 222 VDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ--ADVVAADVVEFNPQRDTVDGM---TAMVAAKLVRELTAK 290 (293)
Q Consensus 222 iDvldps~~pg~~~p~pgGlt~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~---t~~laa~l~~~~~~~ 290 (293)
+|||||+++|||++|+|||||++|++.+++.+. .+++|+||||+||.+|+.+++ |+.+||+++++++..
T Consensus 229 iDvlDp~~aPgtgtp~pgGlt~~e~~~~l~~l~~~~~vvg~DivEv~P~~D~~~~~~~~Ta~laa~li~~~lg~ 302 (306)
T 1pq3_A 229 IDAFDPTLAPATGTPVVGGLTYREGMYIAEEIHNTGLLSALDLVEVNPQLATSEEEAKTTANLAVDVIASSFGQ 302 (306)
T ss_dssp GGGBCTTTCCSBSSCCSSCBCHHHHHHHHHHHHTTTCEEEEEEECBCGGGSSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCcCccccCCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEEEEEEECCCCCCCCchHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999994 589999999999999932467 999999999998763
No 16
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=100.00 E-value=2e-54 Score=402.19 Aligned_cols=205 Identities=23% Similarity=0.350 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCC-CCCccCcccHHHHHHh
Q 022685 83 DDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAF-EGNKYSHASSFARIME 161 (293)
Q Consensus 83 ~~~~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~-~g~~~~~g~~~~~~~~ 161 (293)
.+++++++++.++.+++++ .+||+|||||++|||.++++++++ ++++|||||||+|++++. .++...||||++++++
T Consensus 167 v~~~~~~L~~~V~~il~~G-~~PIvLGGDHSIalg~i~ala~~~-~~lgVI~fDAH~Dlrtpe~s~SGn~hG~pls~alg 244 (413)
T 3sl1_A 167 IGIFSKNLFDTMSNELRKK-NFVLNIGGDHGVAFSSILSSLQMY-QNLRVIWIDAHGDINIPETSPSGNYHGMTLAHTLG 244 (413)
T ss_dssp HHHHHHHHHHHHHHHHTTT-CEEEEEESSGGGHHHHHHHHHHHC-TTCEEEEECSSCCCCCTTTCSSCCGGGTHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCC-CEEEEECCchHhHHHHHHHHHHhC-CCceEEEecCccccCCcccCCCCCcCCCHHHHHHh
Confidence 4678899999999999887 799999999999999999999987 589999999999999864 3444679999999987
Q ss_pred cC----------------CCCcEEEEcccCCChhhHHHHHhcCceEEecccccch--HHHHHHhh--c-cCCcceEEEEE
Q 022685 162 GG----------------YARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLK--L-GEGVKGVYISV 220 (293)
Q Consensus 162 ~~----------------~~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~--~-~~~~~~vyvsi 220 (293)
.+ .++++++||+|+++++|++++++.++++|++.++++. ..+++.+. . ..+.++|||||
T Consensus 245 ~~~~~~~~f~~~~~~~~l~p~~vv~IGIRs~d~eE~e~~~~~Gi~v~t~~eI~~~Gi~~vie~il~~l~~~~~~~VYLSf 324 (413)
T 3sl1_A 245 LFKKKVPYFEWSENLTYLKPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISL 324 (413)
T ss_dssp CCCSBCTTCGGGTTSCCCCGGGEEEEEECCCCHHHHHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHCTTSCSCEEEEE
T ss_pred cccccccccchhccccccCcceEEEEEcCCCCHHHHHHHHHcCCEEEeHHHhhhcCHHHHHHHHHHHhhhcCCceEEEEE
Confidence 32 1469999999999999999999999999999998753 23343332 1 12467899999
Q ss_pred eccccCCCCCCCCCCCCCCCCCHHHHHHHHHhhc--CCeeEEEEeeecCCCCCCC--------------CHHHHHHHHHH
Q 022685 221 DVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ--ADVVAADVVEFNPQRDTVD--------------GMTAMVAAKLV 284 (293)
Q Consensus 221 DiDvldps~~pg~~~p~pgGlt~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~--------------~~t~~laa~l~ 284 (293)
|+|||||++||||++|+|||||++|++.+++.+. .+++||||||++|.+|..+ ++|+.+|++|+
T Consensus 325 DIDvLDPa~APGtGTPepGGLt~rEll~llr~L~~s~kVvG~DIVEvnP~lD~~~~~~~~~~~~~~~~~~~Ta~lA~~li 404 (413)
T 3sl1_A 325 DIDSVDNVFAPGTGTVAKGGLNYREINLLMKILAETKRVVSMDLVEYNPSLDEVDKKVHGDSLPILDNATKTGKLCLELI 404 (413)
T ss_dssp EGGGBCTTTCCCSSSCCSSCBCHHHHHHHHHHHHHHSCEEEEEEECCCGGGCCCCCCCTTCCSSCCTTCCHHHHHHHHHH
T ss_pred eccEEChhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCEEEEEEEeECCccCccccccccccccccccccHHHHHHHHHH
Confidence 9999999999999999999999999999999994 6999999999999999624 79999999999
Q ss_pred HHHHH
Q 022685 285 RELTA 289 (293)
Q Consensus 285 ~~~~~ 289 (293)
.+++.
T Consensus 405 ~s~lG 409 (413)
T 3sl1_A 405 ARVLG 409 (413)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99874
No 17
>2z84_A UFSP1, UFM1-specific protease 1; alpha/beta, papain like fold, hydrolase, thiol protease, UBL conjugation pathway; 1.70A {Mus musculus}
Probab=34.39 E-value=7.7 Score=32.62 Aligned_cols=33 Identities=42% Similarity=0.529 Sum_probs=22.8
Q ss_pred ccEEeCCCC---CCcHHHHHHHHHHcCCCEEEEEEccCC
Q 022685 104 HPLVLGGDH---SISFPVIRAVSEKLGGPVDVLHLDAHP 139 (293)
Q Consensus 104 ~pi~lGGdh---sit~~~~~~~~~~~~~~i~vI~~DAH~ 139 (293)
.||++||+| |-|+--+. ....+.+.++.||-|.
T Consensus 138 ~PI~igG~~~ghS~tIvGve---~~~~g~~~lLIlDPhy 173 (218)
T 2z84_A 138 GPVMVGGDADAQSKALLGIC---EGPGSEVYVLILDPHY 173 (218)
T ss_dssp CCEEECCTTTSCCEEEEEEE---ECTTCCEEEEEECCCC
T ss_pred CCEEECCCcccccceEEeEE---ecCCCcEEEEEECCCc
Confidence 699999995 44444333 2223689999999886
No 18
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=31.54 E-value=19 Score=25.11 Aligned_cols=28 Identities=25% Similarity=0.262 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHhhcCCeeEEEEeeecCCCCC
Q 022685 239 GGLSFRDVLNILHNLQADVVAADVVEFNPQRDT 271 (293)
Q Consensus 239 gGlt~~el~~~l~~i~~~vvg~Di~E~~P~~d~ 271 (293)
|=++.+|++++.+.. ++|+||++|.-++
T Consensus 27 Gv~~~~eAl~~A~e~-----~LDLVevsp~a~P 54 (78)
T 1tif_A 27 GIKSKQEALEIAARR-----NLDLVLVAPNAKP 54 (78)
T ss_dssp EEEEHHHHHHHHHHT-----TCEEEEEETTSSS
T ss_pred CcccHHHHHHHHHHc-----CCCEEEECCCCCC
Confidence 447889999988775 6899999998654
No 19
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=31.40 E-value=66 Score=21.04 Aligned_cols=38 Identities=8% Similarity=0.260 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHH
Q 022685 82 DDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVS 123 (293)
Q Consensus 82 ~~~~~~~~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~ 123 (293)
+.+++..+++ .....++..+++|-+|-.+.|+.+-.+-
T Consensus 28 ~~~~L~~~l~----~~~~~~~~~~V~I~aD~~~~y~~vv~vm 65 (74)
T 2jwk_A 28 TEEMVTQLSR----QEFDKDNNTLFLVGGAKEVPYEEVIKAL 65 (74)
T ss_dssp CHHHHHHHHH----HHHHHCTTCCEEEEECTTSCHHHHHHHH
T ss_pred CHHHHHHHHH----HHHhhCCCceEEEEcCCCCCHHHHHHHH
Confidence 4444444444 4334445679999999999999886554
No 20
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=29.28 E-value=3.1e+02 Score=24.59 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=52.0
Q ss_pred HHHHHhcCC-CCcEEEEcccCCChhhHHHHHhcCceEEecccccchHHHHHHhhccCCcceEEEEEeccccCCCCCCCC-
Q 022685 156 FARIMEGGY-ARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGV- 233 (293)
Q Consensus 156 ~~~~~~~~~-~~~~v~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~- 233 (293)
+..+.+.+. +.+++..|. ...+++.+.+-+.++..+..+.....+.+-+........-+|+|-+|.+.= +.-.+..
T Consensus 92 ~~~~~~~G~~~~~i~~~g~-~k~~~~i~~a~~~gv~~i~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~-~~~~~~~~ 169 (425)
T 2qgh_A 92 IQRALKAGIKPYRIVFSGV-GKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNID-AKTHPYIS 169 (425)
T ss_dssp HHHHHHTTCCGGGEEECCT-TCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCC-CCSCGGGB
T ss_pred HHHHHHcCCChhHEEEcCC-CCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCC-CCCCcccc
Confidence 444444443 345665553 245677777778887655655443322221111111122467777776531 1111111
Q ss_pred --CCCCCCCCCHHHHHHHHHhhc
Q 022685 234 --SHIEPGGLSFRDVLNILHNLQ 254 (293)
Q Consensus 234 --~~p~pgGlt~~el~~~l~~i~ 254 (293)
+...-.|+++.|+.++++.+.
T Consensus 170 tg~~~sRfG~~~~e~~~l~~~~~ 192 (425)
T 2qgh_A 170 TGLKENKFGVGEKEALEMFLWAK 192 (425)
T ss_dssp CCSTTSSSSBCHHHHHHHHHHHH
T ss_pred cCCCCCCCcCCHHHHHHHHHHHH
Confidence 125778999999999888773
No 21
>1ycy_A Conserved hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative; 2.80A {Pyrococcus furiosus} SCOP: b.38.1.4
Probab=22.57 E-value=58 Score=21.59 Aligned_cols=15 Identities=33% Similarity=0.587 Sum_probs=8.3
Q ss_pred CCCccEEeCCCCCCc
Q 022685 101 DPLHPLVLGGDHSIS 115 (293)
Q Consensus 101 ~~~~pi~lGGdhsit 115 (293)
+..+-+.+||+||.+
T Consensus 16 g~rvAv~vg~ehSFt 30 (71)
T 1ycy_A 16 GHKVAVSVGGDHSFT 30 (71)
T ss_dssp TSEEEEEEC----CE
T ss_pred CcEEEEEecCcceee
Confidence 446789999999976
No 22
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=21.75 E-value=41 Score=26.47 Aligned_cols=74 Identities=19% Similarity=0.069 Sum_probs=43.1
Q ss_pred EEEEeccccCCCCCCCCC-CC-CCCCCCHHHHHHHHHhhcCCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhh
Q 022685 217 YISVDVDCLDPAFAPGVS-HI-EPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKI 291 (293)
Q Consensus 217 yvsiDiDvldps~~pg~~-~p-~pgGlt~~el~~~l~~i~~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~ 291 (293)
|=.+|+|.+||..++--. .| .+.|....|+..+++.= ...-++=.+=-+|++...++.+...+..++.+++..+
T Consensus 11 fR~iDVD~~d~d~f~~~~~~~~~~~~p~~~qv~~lL~~g-~~~~ALk~~L~~pP~~~k~q~~K~~~~~~Vl~VL~si 86 (151)
T 1k8k_G 11 FRKVDVDEYDENKFVDEDDGGDGQAGPDEGEVDSCLRQG-NMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISF 86 (151)
T ss_dssp GGTSCGGGGCTTSCCCCCCC----CCCCHHHHHHHHHTT-CHHHHHHHHTSSCCSSCSCHHHHHHHHHHHHHHHHHS
T ss_pred CeecccccCCcccCChhhccCCCCCCCCHHHHHHHHHCC-CHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 456899999998764321 12 23456788998888741 1111112222355566544467777888888877653
No 23
>3god_A CAS1; crispr, metallonuclease, DNAse, prokaryotic immune system, immune system; 2.17A {Pseudomonas aeruginosa}
Probab=21.58 E-value=52 Score=29.23 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=28.8
Q ss_pred ccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCC
Q 022685 104 HPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHP 139 (293)
Q Consensus 104 ~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~ 139 (293)
--|++||..++|-++++.++++ .+.|+|++.+.
T Consensus 60 ~~I~l~g~v~iT~~am~~la~~---gI~V~f~~~~G 92 (328)
T 3god_A 60 TSLLLGTGTSITQAAMRELARA---GVLVGFCGGGG 92 (328)
T ss_dssp EEEEECTTEEEEHHHHHHHHHT---TCEEEEECSTT
T ss_pred CEEEEeCCccCCHHHHHHHHHC---CCEEEEECCCC
Confidence 3588999999999999999864 69999999876
No 24
>1hi9_A Dciaa, dipeptide transport protein DPPA; hydrolase (protease), protease, D-aminopeptidase, decamer, SELF-compartmentalizing; 2.4A {Bacillus subtilis} SCOP: c.99.1.1
Probab=21.29 E-value=87 Score=27.11 Aligned_cols=32 Identities=22% Similarity=0.447 Sum_probs=22.9
Q ss_pred eEEEEEeccccCCCCCCCCCCC---CCCCCCHHHHHHHHH
Q 022685 215 GVYISVDVDCLDPAFAPGVSHI---EPGGLSFRDVLNILH 251 (293)
Q Consensus 215 ~vyvsiDiDvldps~~pg~~~p---~pgGlt~~el~~~l~ 251 (293)
+||||.||..+. |+..| .||+..+++.++++-
T Consensus 2 Ki~IS~DmEGia-----GV~~~~~~~~g~~~Y~r~r~~mT 36 (274)
T 1hi9_A 2 KLYMSVDMEGIS-----GLPDDTFVDSGKRNYERGRLIMT 36 (274)
T ss_dssp EEEEEECSTTST-----TCCSGGGTCTTSTTHHHHHHHHH
T ss_pred eEEEEECCCCCC-----CCCCHHHcCCCcHHHHHHHHHHH
Confidence 699999999876 44444 567777777666553
No 25
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=20.25 E-value=57 Score=30.13 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=24.3
Q ss_pred cc---EEeCCCCCCcH---------------HHHHHHHHHcCCCEEEEEEccCC
Q 022685 104 HP---LVLGGDHSISF---------------PVIRAVSEKLGGPVDVLHLDAHP 139 (293)
Q Consensus 104 ~p---i~lGGdhsit~---------------~~~~~~~~~~~~~i~vI~~DAH~ 139 (293)
+| |+|++||.-++ -.++..-+ ..++=|.||+-.
T Consensus 77 vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~i~~aI~---aGFtSVMiD~S~ 127 (420)
T 2fiq_A 77 FARERIILGGDHLGPNCWQQENVDAAMEKSVELVKAYVR---AGFSKIHLDASM 127 (420)
T ss_dssp CCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHHHHHHHH---TTCCEEEECCCS
T ss_pred cCcceEEEECCCCCCccccccchhhhhhhHHHHHHHHHH---hCCCEEEECCCC
Confidence 56 99999999888 44443332 358899999765
No 26
>3pv9_D Putative uncharacterized protein PH1245; crispr, crispr-associated CAS1, metallonuclease, DNAse, PROK system, immune system, nuclease; 2.85A {Pyrococcus horikoshii}
Probab=20.18 E-value=59 Score=28.72 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=29.2
Q ss_pred CccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCC
Q 022685 103 LHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPD 140 (293)
Q Consensus 103 ~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D 140 (293)
.--|+++|..++|-++++.+++. .+.|+++|.+.-
T Consensus 37 i~~I~l~g~v~is~~~l~~l~~~---gi~v~f~~~~G~ 71 (322)
T 3pv9_D 37 IYDIYIYGHVNITSQALHYIAQK---GILIHFFNHYGY 71 (322)
T ss_dssp EEEEEECSCEEECHHHHHHHHHT---TCEEEEECSSSC
T ss_pred cCEEEEeCCCCcCHHHHHHHHHC---CCeEEEECCCCe
Confidence 34577888999999999999864 699999998763
Done!