BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022690
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/293 (71%), Positives = 243/293 (82%), Gaps = 9/293 (3%)
Query: 1 MGERLTPGSYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLL 60
M ER++PGS+FQYP SG ASP+RS P DRERYL ELL ERQKLGPF+QV+P C RLL
Sbjct: 11 MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70
Query: 61 SQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQ 120
+ EIRR++ SF D +R+EH SPFRSLGQP +DLEG S MQ EEN HLQR +PF+
Sbjct: 71 NHEIRRVS----SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFR 126
Query: 121 TPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRV 180
P +GW G+PG+P P+VK+VIRLDVPVDKYP++NFVGRILGPRGNSLKRVE T CRV
Sbjct: 127 GPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRV 186
Query: 181 FIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKP 240
FIRGRGSVKD++KEEKLK KPGYEHL EPLHVL+EAE PEDIINSRL+HAV LE+LLKP
Sbjct: 187 FIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKP 246
Query: 241 VDESLDHYKKQQLRELAMLNGTLREE--SPSMSPSMSPSMSPFNNAGMKRAKT 291
+DES+DHYK++QL+ELA LNGTLREE SPS+SP +SPSMSPFN+ KRAKT
Sbjct: 247 MDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 293 bits (751), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 161/272 (59%), Positives = 193/272 (70%), Gaps = 12/272 (4%)
Query: 24 RSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITG--YNPSFVDHERFE 81
RS+ +D + YLAELLAE QKLGPF+QVLP+CS+LLSQEI R++ +N F D +R
Sbjct: 20 RSNPTDVDSQ-YLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHR 78
Query: 82 HDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKR 141
SP G S NG Q F SM WQG P P++ VVK+
Sbjct: 79 FRSPSPMSSPNPRSNRSGNGFSPW----NGLHQERLGFPQGTSMDWQGAPPSPSSHVVKK 134
Query: 142 VIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKP 201
++RLDVPVD YPNFNFVGRILGPRGNSLKRVEA T CRVFIRG+GS+KD KE+KL+ KP
Sbjct: 135 ILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKP 194
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
GYEHL++PLH+L+EAEFP II++RL HA ++E LLKPVDES D YK+QQLRELAMLN
Sbjct: 195 GYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLNS 254
Query: 262 TLREESPSMSPSMSPSMSPFNNAGMKRAKTGR 293
TLRE+SP S+SPF+N GMKRAKTG+
Sbjct: 255 TLREDSPHPG-----SVSPFSNGGMKRAKTGQ 281
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 281 bits (719), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/295 (53%), Positives = 196/295 (66%), Gaps = 27/295 (9%)
Query: 9 SYFQYPPSGVHASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRIT 68
+Y + PS + R+ S +D + Y+++LLAE QKLGPF+QVLP+CSRLL+QEI RIT
Sbjct: 6 NYNNFSPSRAASPQIRTPSSDVDSQ-YISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 64
Query: 69 GYNPS--FVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQT--------EENGHLQRMAP 118
G P+ F D +R H SP P P + +S E G MA
Sbjct: 65 GMMPNQGFTDFDRLRHRSP-----SPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA- 118
Query: 119 FQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTEC 178
M WQG P P++ VKR++RLD+PVD YPNFNFVGR+LGPRGNSLKRVEA T C
Sbjct: 119 ------MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGC 172
Query: 179 RVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLL 238
RV+IRG+GS+KD KEEKLK KPGYEHLNE LH+L+EA+ P DI++ +L A I+E L+
Sbjct: 173 RVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELV 232
Query: 239 KPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNNAGMKRAKTGR 293
KPVDES D+ K+QQLRELA+LN LRE SP S S+SPFN+ MKR KTGR
Sbjct: 233 KPVDESQDYIKRQQLRELALLNSNLREN----SPGPSGSVSPFNSNAMKRPKTGR 283
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 278 bits (711), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/265 (55%), Positives = 188/265 (70%), Gaps = 11/265 (4%)
Query: 27 SLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPF 86
S +++E+YL+ELLAER KL PF+ VLP RL++QEI R+T + + RF+H SP
Sbjct: 53 SFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENALSQSRFDHPSPL 112
Query: 87 RSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLD 146
S G D+ G ++ E + P+ W PG + +VKR IR+D
Sbjct: 113 ASGGIFQNSRADMNGWASQFPSERS-------VSSSPAPNWLNSPGSSSGLIVKRTIRVD 165
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+PVDKYPN+NFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKE+ ++ KPGYEHL
Sbjct: 166 IPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHL 225
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
NEPLH+LVEAE P +I+++RL A IL++LL PV+E+ D YKKQQLRELA+LNG+LREE
Sbjct: 226 NEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREE 285
Query: 267 SPSMSPSMSPSMSPFNNAGMKRAKT 291
SP MS S+SP+N+ GMKRAKT
Sbjct: 286 G---SP-MSGSISPYNSLGMKRAKT 306
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 277 bits (708), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/281 (54%), Positives = 189/281 (67%), Gaps = 20/281 (7%)
Query: 20 ASPHRSSSLPLDRERYLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGY--NPSFVDH 77
ASP S+ +D +YL ELLAE QKL PF+QVLP+CSRLL+QE+ R++G N F D
Sbjct: 17 ASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDF 76
Query: 78 ERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEE-----NGHLQRMAPFQTPPSMGWQGIPG 132
+R H SP PM L + + NG Q +M WQG PG
Sbjct: 77 DRLRHRSP---------SPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPG 127
Query: 133 IPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSI 192
P++ VKR++RL++PVD YPNFNFVGR+LGPRGNSLKRVEA T CRVFIRG+GS+KD
Sbjct: 128 SPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPE 187
Query: 193 KEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQ 252
KE+KL+ +PGYEHLNE LH+L+EA+ P I+ RL A I+E LLKPVDES D K+QQ
Sbjct: 188 KEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQ 247
Query: 253 LRELAMLN-GTLREESPSMSPSMSPSMSPFNNAGMKRAKTG 292
LRELA+LN LREESP PS S+SPFN++G KR KTG
Sbjct: 248 LRELALLNSNNLREESP--GPSGGGSVSPFNSSG-KRPKTG 285
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 275 bits (703), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 198/295 (67%), Gaps = 20/295 (6%)
Query: 5 LTPGSYFQYPPSGVHASPHRS------SSLPLDRERYLAELLAERQKLGPFVQVLPLCSR 58
+T S PPS SP+ S SS+ +++E+YL+ELLAER KL PF+ VLP R
Sbjct: 30 MTYSSSLSVPPSAPQ-SPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFR 88
Query: 59 LLSQEIRRITGY--NPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRM 116
LL+QEI R+T N + + +H SP S G D+ G ++ E R
Sbjct: 89 LLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSE-----RS 143
Query: 117 APFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMT 176
P + P W PG + + KR IR+D+PVD YPNFNFVGR+LGPRGNSLKRVEA T
Sbjct: 144 VP--SSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEAST 201
Query: 177 ECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILEN 236
+CRV IRGRGS+KD IKEE ++ KPGYEHLNEPLH+LVEAE P +I+++RL A IL++
Sbjct: 202 DCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 261
Query: 237 LLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPSMSPFNNAGMKRAKT 291
LL P++E+ D YKKQQLRELA+LNGTLREE SP MS S+SP+N+ GMKRAKT
Sbjct: 262 LLTPMEETHDMYKKQQLRELALLNGTLREEG---SP-MSGSVSPYNSLGMKRAKT 312
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 79 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 138
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 139 NRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 198
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 199 AILNGTYRDANLKSPALAFSLAAT 222
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 79 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 138
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 139 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 198
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 199 AILNGTYRDANLKSPALAFSLAAT 222
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+V+ +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 99/144 (68%), Gaps = 3/144 (2%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P+ + +L VPV +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D KEE+
Sbjct: 78 PIAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQ 137
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
+ KP +EHLNE LHVL+ E ++ +L AV ++ LL P E D KK QL EL
Sbjct: 138 NRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMEL 197
Query: 257 AMLNGTLRE---ESPSMSPSMSPS 277
A+LNGT R+ +SP+++ S++ +
Sbjct: 198 AILNGTYRDANIKSPALAFSLAAT 221
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 47/233 (20%)
Query: 35 YLAELLAERQKLGPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNG 94
YLA+LL +R++L F V RLL +EI R+ SL Q NG
Sbjct: 78 YLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRA------------------SLFQING 119
Query: 95 RPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPN 154
+ P P P VV ++ VPV ++P+
Sbjct: 120 -------------------VKKEPLTLPE----------PEGSVVTMNEKVYVPVREHPD 150
Query: 155 FNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLV 214
FNFVGRILGPRG + K++E T C++ +RG+GS++D KE+ + KP +EHL++ LHVL+
Sbjct: 151 FNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLI 210
Query: 215 EAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREES 267
E E+ +L AVA ++ LL P E D KK+QL ELA++NGT R+ +
Sbjct: 211 TVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTT 263
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P P+V +L VPV +YP++NFVGRILGPRG + K++EA T C++ +RGR S++D K
Sbjct: 75 PVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKK 134
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQL 253
EE+ + KP +EHLNE LHVL+ E + ++ AV ++ LL P E D+ KK QL
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQL 194
Query: 254 RELAMLNGTLRE---ESPSMSPSM 274
ELA+LNGT R+ ++P+++ S+
Sbjct: 195 MELAILNGTYRDTNIKAPTLAFSL 218
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 84/121 (69%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY 203
++ VP ++YP++NFVGRILGPRG + K++E T C++ +RG+GS++D KE + K +
Sbjct: 208 KIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANW 267
Query: 204 EHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTL 263
EHL + LHVLV+ E E+ ++ +L A+ ++ LL P E D K++QL ELA++NGT
Sbjct: 268 EHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTY 327
Query: 264 R 264
R
Sbjct: 328 R 328
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 119/236 (50%), Gaps = 58/236 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+GR D EE +L + + +K R+ +P
Sbjct: 38 ---SDGRKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEHL 206
V +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL
Sbjct: 68 VKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHL 127
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 128 SDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 58/236 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
++ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+G+ D EE +L + + +K R+ +P
Sbjct: 38 ---SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEHL 206
V +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL
Sbjct: 68 VKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHL 127
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 128 SDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 58/236 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+ E+YL EL+AE+ L P FV SRLL++EI + G
Sbjct: 1 MGEEKYLPELMAEKDSLDPSFVH----ASRLLAEEIEKFQG------------------- 37
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+G+ D EE +L + + +K R+ +P
Sbjct: 38 ---SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIP 67
Query: 149 VDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEHL 206
V +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL
Sbjct: 68 VKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHL 127
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 128 SDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 121/236 (51%), Gaps = 58/236 (24%)
Query: 30 LDRERYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
++ E+YL EL+AE+ L P FV + RLL +EI +
Sbjct: 1 MEEEKYLPELMAEKDSLDPSFVHAM----RLLDEEIVKF--------------------- 35
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
D EG +E+G + + I + +K R+ +P
Sbjct: 36 --------QDSEG-----NKEDGEKKYL---------------DIISNKNIKLSERVLIP 67
Query: 149 VDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHL 206
V +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D IKEE+L+ D+ + HL
Sbjct: 68 VKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHL 127
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
++ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 128 SDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 122/236 (51%), Gaps = 58/236 (24%)
Query: 30 LDRERYLAELLAERQKL-GPFVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRS 88
+D+++YL EL+AE++ L FV + RLL++EI E+FE D
Sbjct: 1 MDQDKYLPELVAEKESLDASFVHAM----RLLAEEI-------------EKFEGD----- 38
Query: 89 LGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVP 148
+ ++G +++ I + +K R+ +P
Sbjct: 39 -----------------ELRKDGEVKKYLD--------------IISNKNIKLSERVLIP 67
Query: 149 VDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYEHL 206
V +YP FNFVG++LGPRGNS+KR++ T ++ I G+GS++D KEE+L+ + Y HL
Sbjct: 68 VQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHL 127
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGT 262
+ LHVL+E P SR+ HA+ ++ L P + D +++QLREL+ LNG+
Sbjct: 128 SNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLNGS 181
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+P++ YP NFVG +LGPRGN+LK+++ + C++ IRGRGSVK+ L G ++
Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDLPK--GAMNM 212
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
NEPLH ++ A+ E I I++ + P E + K+ QLRELA+LNGTLRE+
Sbjct: 213 NEPLHCVISADTEEKIPLGINAVESIIIKAITSP--EGQNDLKRGQLRELAVLNGTLRED 270
Query: 267 S 267
+
Sbjct: 271 N 271
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYE 204
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYE 204
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KPGYE 204
+PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
HLN+ LHVL+E P +R+ HA+ ++ L P + D ++ QL+EL LNG
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLNG 176
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 83/129 (64%), Gaps = 11/129 (8%)
Query: 137 PVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEK 196
P K+ ++ +P+ +P +NF+G I+GPRGN+ KR+E + ++ IRG+GS +D K K
Sbjct: 175 PNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRDG-KPTK 233
Query: 197 LKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLREL 256
L+ + N+ LHVL+ A D ++ +LD A ++ L PV+E + +K+QQLREL
Sbjct: 234 LQFQE-----NDELHVLLTA----DTVD-QLDKAEVLVREFLIPVEEGKNEHKRQQLREL 283
Query: 257 AMLNGTLRE 265
A +NGTLRE
Sbjct: 284 AEMNGTLRE 292
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 60/245 (24%)
Query: 22 PHRSSSLPLDRE-RYLAELLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHER 79
P ++S+ ++ E +YL EL+AE+ L P F + +LL+ EI +I + D E
Sbjct: 89 PSATASVKMEPENKYLPELMAEKDSLDPSFTHAM----QLLTAEIEKIQKGDSKKDDEEN 144
Query: 80 FEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVV 139
+ +DL M+ +E
Sbjct: 145 Y----------------LDLFSHKNMKLKE------------------------------ 158
Query: 140 KRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD 199
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+
Sbjct: 159 ----RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRK 214
Query: 200 --KPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELA 257
P Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+
Sbjct: 215 GGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELS 272
Query: 258 MLNGT 262
LNG
Sbjct: 273 YLNGV 277
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 80/124 (64%), Gaps = 10/124 (8%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+PVD+YP+ NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG +
Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNF 211
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENL-LKPVD--ESLDHYKKQQLRELAMLNGTL 263
+PLH L+ A+ ED ++ + + +N+ +K V E + K+ QLRELA LNGTL
Sbjct: 212 EDPLHCLIIADS-ED----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTL 266
Query: 264 REES 267
RE++
Sbjct: 267 REDN 270
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Query: 262 T 262
Sbjct: 277 V 277
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 276
Query: 262 T 262
Sbjct: 277 V 277
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKD--KP 201
R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNG 261
Y HLN LHV +E P + + HA+ ++ L P + +D ++Q EL+ LNG
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLNG 259
Query: 262 T 262
Sbjct: 260 V 260
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 13/136 (9%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-- 186
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 13/136 (9%)
Query: 134 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIK 193
P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+
Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG-- 186
Query: 194 EEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKK 250
+ KD +EPLH LV A E++ AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 251 QQLRELAMLNGTLREE 266
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+PV +YP NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG
Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDF 197
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
++PLH L+ A+ E I N +++ + P E + K+ QLRELA LNGTLRE+
Sbjct: 198 SDPLHCLIIADNEEKIENGIKACRNIVIKAVTSP--EGQNELKRGQLRELAELNGTLRED 255
Query: 267 S 267
+
Sbjct: 256 N 256
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 13/127 (10%)
Query: 144 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY 203
++ VPV YP NF+G ++GPRG++LK +EA + ++ IRG+GSV KE K + P
Sbjct: 189 KVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEGKGRSDPSV 244
Query: 204 E-HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAML 259
++ E LH LV A+ ED IN HA+ +++N+++ V E + K+ QLR+LA L
Sbjct: 245 RGNMEEDLHCLVTADS-EDKIN----HAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATL 299
Query: 260 NGTLREE 266
NGTLR++
Sbjct: 300 NGTLRDD 306
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 142 VIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKP 201
V RL VPV YP+ NFVG ++GPRGN+LK+++ + R+ IRG+GSVK+ +
Sbjct: 149 VERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGSSQ 208
Query: 202 GYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELAM 258
+ + LHVL+ A+ P ++ AV ++ ++ + + ++ K+ QL+ELA+
Sbjct: 209 TGTDIQDDLHVLITADSP-----LKISKAVKLVNEIIDKLIFSPQGMNFMKRDQLKELAV 263
Query: 259 LNGTLREESP 268
LNGTLRE P
Sbjct: 264 LNGTLRETKP 273
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VPV+ YP NF+G ++GPRGN+LK++EA + ++ IRG+GSVK+ + D +
Sbjct: 187 VPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKEG---KGRSDAAHASNQ 243
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAMLNGTL 263
E LH L+ A+ E +++ A ++ N+++ + E + K+ QLRELA LNGTL
Sbjct: 244 EEDLHCLIMADTEE-----KVNKAKKLVHNVIETAASIPEGQNELKRNQLRELAALNGTL 298
Query: 264 REE 266
R++
Sbjct: 299 RDD 301
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 11/123 (8%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
VPV+ YP NF+G ++GPRGN+LK++E + ++ IRG+GSVK+ + D +
Sbjct: 202 VPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG---KGRSDAAHSSNQ 258
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLK---PVDESLDHYKKQQLRELAMLNGTL 263
E LH L+ A+ E +++ A ++ N+++ + E + K+ QLRELA LNGTL
Sbjct: 259 EEDLHCLIMADTEE-----KVNKAKKLIHNIIETAASIPEGQNELKRNQLRELAALNGTL 313
Query: 264 REE 266
R++
Sbjct: 314 RDD 316
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+PV++YP+ NF+G++LG RG +LK++E + ++ IRGRGSVK + + D P
Sbjct: 185 IPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVK---QGKGRTDIPFQSTA 241
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
+ LH L+ +E E I +R V + + V E + K+ QLRELA LNGTLR++
Sbjct: 242 EDDLHCLIISEDEEKI--ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRDD 299
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 16/143 (11%)
Query: 139 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK 198
VK ++ +PV YP+ NFVG +LGPRGN+L++++ + R+ IRG+GSVKD
Sbjct: 160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNN 219
Query: 199 DKPGYEHL------------NEPLHVLVEAEFPEDIINS-RLDHAVAILENLLKPVDESL 245
D N+ LHV++ ++ I + +L + V I + + PV +
Sbjct: 220 DDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKAIKLTNQV-IEKAISSPVGQ-- 276
Query: 246 DHYKKQQLRELAMLNGTLREESP 268
+ K+ QLRELA+LNGTLRE P
Sbjct: 277 NDLKRGQLRELAILNGTLRETKP 299
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 112 HLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKR 171
H++ + +T P+ G + VK V R +PVD++P +NF+G++LGP G+++K+
Sbjct: 45 HIKTGSRPKTVPNTDGSGFMDLYNDTKVKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQ 104
Query: 172 VEAMTECRVFIRGRGSVKDSIKEEKLKDKPG--YEHLNEPLHVLVEAEFPEDIINSRLDH 229
++ T ++ I GRGS++D KEE+L++ Y HLNE LH+ + + ++R+ +
Sbjct: 105 LQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAEAHARMAY 164
Query: 230 AVAILENLLKPVDE 243
A+ ++ + P ++
Sbjct: 165 ALTEIKKYITPEED 178
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY--E 204
+PV ++P NF G ++GPRGNSLK++E + ++ IRG+GSVK+ K + G +
Sbjct: 252 IPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFPQ 305
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELAMLNG 261
+ LH L+ A+ S++ VA++ +++ E + +K+ QLRELA LNG
Sbjct: 306 DEEDELHCLITAD-----DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLNG 360
Query: 262 TLREE 266
TLR++
Sbjct: 361 TLRDD 365
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 16/125 (12%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGY--E 204
+PV ++P NF G ++GPRGNSLK++E + ++ IRG+GSVK+ K + G +
Sbjct: 252 IPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKEG------KGRAGNFPQ 305
Query: 205 HLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVD---ESLDHYKKQQLRELAMLNG 261
+ LH L+ A+ S++ VA++ +++ E + +K+ QLRELA LNG
Sbjct: 306 DEEDELHCLITAD-----DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLNG 360
Query: 262 TLREE 266
TLR++
Sbjct: 361 TLRDD 365
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 147 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHL 206
+P+ ++P F G ++GPRGN+LK +E + ++ IRG+GSVK K K +
Sbjct: 254 LPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKTG------KGKMDADED 307
Query: 207 NEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 266
E +H +V A+ E + + ++E + DH K+ QLRELA LNGTLR++
Sbjct: 308 EEEMHCVVTAD-DEASVKKCIKLINQVIETAASTPEGENDH-KRNQLRELAALNGTLRDD 365
>sp|Q6NZ18|K0907_DANRE UPF0469 protein KIAA0907 homolog OS=Danio rerio PE=2 SV=1
Length = 570
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 154 NFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVL 213
FN R+ GP + L+ ++A T +VF+RG+GS L+ G E EP+++
Sbjct: 220 GFNVKERVEGPSCSFLQHIQAETGAKVFLRGKGS-------GCLEPASGREAF-EPMYIY 271
Query: 214 VEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQ 251
+ PE + +++ + ENLL+ V Y Q
Sbjct: 272 ISHPKPEGLASAK-----TLCENLLQTVHAEYSRYLNQ 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,332,858
Number of Sequences: 539616
Number of extensions: 5241026
Number of successful extensions: 15034
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 14838
Number of HSP's gapped (non-prelim): 201
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)