Your job contains 1 sequence.
>022691
MPSLNWKHHALVQALMTRGPLKEKDFHAIFSGLTGKSPGAHQGLFNEYLLNINKELSSCQ
FELRACRDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISN
IEALNIRLENLVLSTQGSQLLNGPLPAAFRNFTMSQKEKTLDEFVQDQWLCCTPDGKIGL
GVRSCLDLRGWFRNLDVPFCEVCNEAVVKGEILCPRCGLRWPNQVPKAEILDEEEVPNAT
IQSQPAQGPKRKRTKTNETHAKDAVGCGSSQSSVPNSDFRRITRRSSRPASQS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022691
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179003 - symbol:emb1379 "AT5G21140" species:3... 767 3.9e-76 1
UNIPROTKB|Q5RAZ5 - symbol:NSMCE1 "Non-structural maintena... 121 4.3e-05 1
UNIPROTKB|Q8WV22 - symbol:NSMCE1 "Non-structural maintena... 118 9.8e-05 1
UNIPROTKB|E2RFI7 - symbol:NSMCE1 "Uncharacterized protein... 117 0.00015 1
RGD|1307760 - symbol:Nsmce1 "non-SMC element 1 homolog (S... 116 0.00016 1
UNIPROTKB|Q499U6 - symbol:Nsmce1 "Non-structural maintena... 116 0.00016 1
UNIPROTKB|Q6P881 - symbol:nsmce1 "Non-structural maintena... 116 0.00017 1
UNIPROTKB|Q3T0X7 - symbol:NSMCE1 "Non-structural maintena... 113 0.00037 1
MGI|MGI:1914961 - symbol:Nsmce1 "non-SMC element 1 homolo... 112 0.00048 1
UNIPROTKB|G4MZL2 - symbol:MGG_01429 "Uncharacterized prot... 102 0.00083 2
>TAIR|locus:2179003 [details] [associations]
symbol:emb1379 "AT5G21140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009793 "embryo development ending in
seed dormancy" evidence=NAS] InterPro:IPR014857 InterPro:IPR011513
Pfam:PF07574 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC140977 eggNOG:NOG314368
PANTHER:PTHR20973 Pfam:PF08746 EMBL:BT012134 EMBL:BT012410
IPI:IPI00540221 RefSeq:NP_680177.2 UniGene:At.45875
ProteinModelPortal:Q84VP9 SMR:Q84VP9 PaxDb:Q84VP9 PRIDE:Q84VP9
EnsemblPlants:AT5G21140.1 GeneID:832240 KEGG:ath:AT5G21140
TAIR:At5g21140 HOGENOM:HOG000030646 InParanoid:Q84VP9 OMA:NKELSYV
PhylomeDB:Q84VP9 ProtClustDB:CLSN2680144 Genevestigator:Q84VP9
Uniprot:Q84VP9
Length = 312
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 162/294 (55%), Positives = 205/294 (69%)
Query: 1 MPSLNWKHHALVQALMTRGPLKEKDFHAIFSGLTGKSPGAHQGLFNEYLLNINKELSSCQ 60
M SL+WKHH L+QAL++RGPLKEK+FH+IF+ +TG++P + +F++YLL INKELS
Sbjct: 1 MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60
Query: 61 FELRACRDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISN 120
FEL+ACRDQY GQVCYGVVNNVAD+QSKLGTKY+V QIAFFKGI+EAIAQD AQG IS+
Sbjct: 61 FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120
Query: 121 IEALNIRLENLVLSTQGSQLLNGPLPAAFRNFTMSQKEKTLDEFVQDQWLCCTPDGKIGL 180
+ALNIRLEN + S S +P AF+NF+M+QKEKTLDE V+D+WLC T + IGL
Sbjct: 121 FDALNIRLENQISSEASSS--QQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGL 178
Query: 181 GVRSCLDLRGWFRNLDVPFCEVCNEAVVKGEILCPR--CGLRWPNQVPKAEILDEEEVPN 238
G+RS LDLR WFRN DVP CEVCNEA VK + LCP C +R K ++L + +
Sbjct: 179 GIRSLLDLRSWFRNNDVPSCEVCNEAGVKAD-LCPTEGCPVRIHKYCLK-KLLSQRDDKR 236
Query: 239 ATIQSQPAQGPKRKRTKTNETH-AKDAVGCGSSQSSVPNSDFRRITRRSSRPAS 291
+ +P P K TKT A + +Q++ P + RR R S+ S
Sbjct: 237 CSGCGKP--WPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQRDSTENGS 288
>UNIPROTKB|Q5RAZ5 [details] [associations]
symbol:NSMCE1 "Non-structural maintenance of chromosomes
element 1 homolog" species:9601 "Pongo abelii" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0030915 "Smc5-Smc6
complex" evidence=ISS] [GO:2001022 "positive regulation of response
to DNA damage stimulus" evidence=ISS] InterPro:IPR001841
InterPro:IPR014857 InterPro:IPR002219 InterPro:IPR011513
Pfam:PF07574 GO:GO:0005634 GO:GO:0035556 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0006310 GO:GO:0004842
GO:GO:0000781 GO:GO:2001022 GO:GO:0030915 HSSP:Q8WV22 CTD:197370
HOVERGEN:HBG082058 PANTHER:PTHR20973 Pfam:PF08746 EMBL:CR858866
RefSeq:NP_001125616.1 UniGene:Pab.13739 ProteinModelPortal:Q5RAZ5
SMR:Q5RAZ5 GeneID:100172534 KEGG:pon:100172534 Uniprot:Q5RAZ5
Length = 266
Score = 121 (47.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 60/240 (25%), Positives = 97/240 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTG-KSPGAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E D + A +++ NIN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEEWDVKRLQRHCYKVHDRNATVDKLEDFINNINSVLESLYIEIKRG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ T + ++ F+ LE I GS +NI L
Sbjct: 75 VTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSETGFGSSTNILNLVD 134
Query: 127 RLENLVL-STQGSQLL-----NGPLPAAFRNFTMS-----QKEKTLDEFVQDQWLCCTPD 175
+L+ + + Q+L N L FT+ + E+ + E D C
Sbjct: 135 QLKGKKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYIRETYPDAVKICNIC 194
Query: 176 GKIGLGVRSCLDLRGWFRNLDVPFCEVCNEAVVKGEILCPRCGLRWPNQVPKAEILDEEE 235
+ + +SC + G R + +P C V E CP C WP+++PK + D E+
Sbjct: 195 HSLLIQGQSC-ETCG-IR-MHLP-C-VAKYFQSNAEPRCPHCNDYWPHEIPK--VFDPEK 247
>UNIPROTKB|Q8WV22 [details] [associations]
symbol:NSMCE1 "Non-structural maintenance of chromosomes
element 1 homolog" species:9606 "Homo sapiens" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:2001022 "positive regulation of response to DNA
damage stimulus" evidence=IMP] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR014857 InterPro:IPR002219
InterPro:IPR011513 Pfam:PF07574 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0006310
EMBL:CH471145 GO:GO:0004842 GO:GO:0000781 GO:GO:2001022
GO:GO:0030915 EMBL:AC106739 PDB:3NW0 PDBsum:3NW0 CTD:197370
eggNOG:NOG314368 HOGENOM:HOG000006778 HOVERGEN:HBG082058
OrthoDB:EOG498V1N PANTHER:PTHR20973 Pfam:PF08746 EMBL:AF161451
EMBL:AF161455 EMBL:BC018938 IPI:IPI00184884 RefSeq:NP_659547.2
UniGene:Hs.284295 PDB:2CT0 PDBsum:2CT0 ProteinModelPortal:Q8WV22
SMR:Q8WV22 IntAct:Q8WV22 PhosphoSite:Q8WV22 DMDM:209572785
PRIDE:Q8WV22 DNASU:197370 Ensembl:ENST00000361439 GeneID:197370
KEGG:hsa:197370 UCSC:uc002doi.1 GeneCards:GC16M027236
H-InvDB:HIX0012912 HGNC:HGNC:29897 HPA:HPA041567 HPA:HPA043091
neXtProt:NX_Q8WV22 PharmGKB:PA134943761 InParanoid:Q8WV22
OMA:RMHLPCV ChiTaRS:NSMCE1 EvolutionaryTrace:Q8WV22
GenomeRNAi:197370 NextBio:89665 Bgee:Q8WV22 CleanEx:HS_NSMCE1
Genevestigator:Q8WV22 Uniprot:Q8WV22
Length = 266
Score = 118 (46.6 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 61/249 (24%), Positives = 102/249 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTG-KSPGAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E D + + A +++ NIN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEEWDVKRLQTHCYKVHDRNATVDKLEDFINNINSVLESLYIEIKRG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ T + ++ F+ LE I S +NI L
Sbjct: 75 VTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSETGFASSTNILNLVD 134
Query: 127 RLENLVL-STQGSQLL-----NGPLPAAFRNFTMS-----QKEKTLDEFVQDQWLCCTPD 175
+L+ + + Q+L N L FT+ + E+ + E D C
Sbjct: 135 QLKGKKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYIRETYPDAVKICNIC 194
Query: 176 GKIGLGVRSCLDLRGWFRNLDVPFCEVCNEAVVKGEILCPRCGLRWPNQVPKAEILD-EE 234
+ + +SC + G R + +P C V E CP C WP+++PK + D E+
Sbjct: 195 HSLLIQGQSC-ETCG-IR-MHLP-C-VAKYFQSNAEPRCPHCNDYWPHEIPK--VFDPEK 247
Query: 235 EVPNATIQS 243
E + ++S
Sbjct: 248 ERESGVLKS 256
>UNIPROTKB|E2RFI7 [details] [associations]
symbol:NSMCE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001022 "positive regulation of response to
DNA damage stimulus" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001841
InterPro:IPR014857 InterPro:IPR002219 InterPro:IPR011513
Pfam:PF07574 PROSITE:PS50081 PROSITE:PS50089 GO:GO:0035556
GO:GO:0008270 GO:GO:0004842 GO:GO:2001022 GO:GO:0030915 CTD:197370
PANTHER:PTHR20973 Pfam:PF08746 GeneTree:ENSGT00390000009084
OMA:RMHLPCV EMBL:AAEX03004424 RefSeq:XP_536928.2
Ensembl:ENSCAFT00000027675 GeneID:479800 KEGG:cfa:479800
Uniprot:E2RFI7
Length = 283
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 60/246 (24%), Positives = 100/246 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGL--TGKSPGAHQGLFNEYLLNINKELSSCQFELRA 65
H +Q LMT G L+E D + A + L +++ NIN L S E++
Sbjct: 32 HRRFLQLLMTHGVLEEWDVRRLQKHCYRVHDRTAAVEEL-EDFINNINSVLESLYIEIKK 90
Query: 66 CRDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALN 125
+ G+ Y +VN SK+ + + ++ F+ LE I S +NI L
Sbjct: 91 GATEDDGRPVYALVNLATTSVSKMASDFAENELDLFRKALELIIDSETGFASSTNILNLV 150
Query: 126 IRLENLVL-STQGSQLL-----NGPLPAAFRNFTMSQK-----EKTLDEFVQDQWLCCTP 174
+L+ + + Q+L N L FT+ + E+ + E D C
Sbjct: 151 DQLKGKKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHSRAILEMEQYIRETYPDAVKICNI 210
Query: 175 DGKIGLGVRSCLDLRGWFRNLDVPFCEVCNEAVVKGEILCPRCGLRWPNQVPKAEILDEE 234
+ + +SC + G R + +P C V E CP C WP+++P E+ D E
Sbjct: 211 CHSLLIQGQSC-ETCG-IR-MHLP-C-VAKYFQSNSEPRCPHCNDYWPHEIP--EVFDPE 263
Query: 235 EVPNAT 240
+ A+
Sbjct: 264 KEREAS 269
>RGD|1307760 [details] [associations]
symbol:Nsmce1 "non-SMC element 1 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000781 "chromosome,
telomeric region" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA;ISO;ISS] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:2001022
"positive regulation of response to DNA damage stimulus"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR014857
InterPro:IPR002219 InterPro:IPR011513 Pfam:PF07574 RGD:1307760
GO:GO:0005634 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006310 GO:GO:0004842 GO:GO:0000781
GO:GO:2001022 GO:GO:0030915 HSSP:Q8WV22 CTD:197370 eggNOG:NOG314368
HOGENOM:HOG000006778 HOVERGEN:HBG082058 OrthoDB:EOG498V1N
PANTHER:PTHR20973 Pfam:PF08746 GeneTree:ENSGT00390000009084
EMBL:BC099757 IPI:IPI00779411 RefSeq:NP_001034700.1
UniGene:Rn.17063 ProteinModelPortal:Q499U6 SMR:Q499U6 STRING:Q499U6
Ensembl:ENSRNOT00000055034 GeneID:361645 KEGG:rno:361645
UCSC:RGD:1307760 InParanoid:Q499U6 NextBio:677069
ArrayExpress:Q499U6 Genevestigator:Q499U6 Uniprot:Q499U6
Length = 266
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTG-KSPGAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E + + + A +++ NIN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEEWEVRRLQNHCYKVHDRNATVDKLEDFINNINSVLESLYIEIKKG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ T + ++ F+ LE I S +NI L
Sbjct: 75 ITEDDGRPIYALVNLATTSVSKMATDFAENELDLFRKALELIVDSETGFASSTNILNLVD 134
Query: 127 RLENLVL-STQGSQLLNGPLPAAFR-----NFTMSQKE-KTLDEFVQDQWLCCTPDGKIG 179
+L+ + + Q+L + + + FT+ + +++F+++ + PD
Sbjct: 135 QLKGKKMRKKEAEQVLQKFVQSKWLIEKEGEFTLHGRAILEMEQFIRESY----PDAVKM 190
Query: 180 LGVRSCLDLRGWFRNLDVPFCEVCN-----EAVVK-----GEILCPRCGLRWPNQVPKAE 229
+ L ++G CE C V K E CP C WP+ +P E
Sbjct: 191 CNICHSLLIQG-------QSCETCGIRMHLPCVAKYFQSTAEPRCPHCNDYWPHDIP--E 241
Query: 230 ILDEEEVPNATIQSQPAQGPKRKR 253
+ D E+ A I S+ ++ R R
Sbjct: 242 VFDPEKEREAGI-SKSSRKSLRTR 264
>UNIPROTKB|Q499U6 [details] [associations]
symbol:Nsmce1 "Non-structural maintenance of chromosomes
element 1 homolog" species:10116 "Rattus norvegicus" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001841 InterPro:IPR014857
InterPro:IPR002219 InterPro:IPR011513 Pfam:PF07574 RGD:1307760
GO:GO:0005634 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006310 GO:GO:0004842 GO:GO:0000781
GO:GO:2001022 GO:GO:0030915 HSSP:Q8WV22 CTD:197370 eggNOG:NOG314368
HOGENOM:HOG000006778 HOVERGEN:HBG082058 OrthoDB:EOG498V1N
PANTHER:PTHR20973 Pfam:PF08746 GeneTree:ENSGT00390000009084
EMBL:BC099757 IPI:IPI00779411 RefSeq:NP_001034700.1
UniGene:Rn.17063 ProteinModelPortal:Q499U6 SMR:Q499U6 STRING:Q499U6
Ensembl:ENSRNOT00000055034 GeneID:361645 KEGG:rno:361645
UCSC:RGD:1307760 InParanoid:Q499U6 NextBio:677069
ArrayExpress:Q499U6 Genevestigator:Q499U6 Uniprot:Q499U6
Length = 266
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTG-KSPGAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E + + + A +++ NIN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEEWEVRRLQNHCYKVHDRNATVDKLEDFINNINSVLESLYIEIKKG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ T + ++ F+ LE I S +NI L
Sbjct: 75 ITEDDGRPIYALVNLATTSVSKMATDFAENELDLFRKALELIVDSETGFASSTNILNLVD 134
Query: 127 RLENLVL-STQGSQLLNGPLPAAFR-----NFTMSQKE-KTLDEFVQDQWLCCTPDGKIG 179
+L+ + + Q+L + + + FT+ + +++F+++ + PD
Sbjct: 135 QLKGKKMRKKEAEQVLQKFVQSKWLIEKEGEFTLHGRAILEMEQFIRESY----PDAVKM 190
Query: 180 LGVRSCLDLRGWFRNLDVPFCEVCN-----EAVVK-----GEILCPRCGLRWPNQVPKAE 229
+ L ++G CE C V K E CP C WP+ +P E
Sbjct: 191 CNICHSLLIQG-------QSCETCGIRMHLPCVAKYFQSTAEPRCPHCNDYWPHDIP--E 241
Query: 230 ILDEEEVPNATIQSQPAQGPKRKR 253
+ D E+ A I S+ ++ R R
Sbjct: 242 VFDPEKEREAGI-SKSSRKSLRTR 264
>UNIPROTKB|Q6P881 [details] [associations]
symbol:nsmce1 "Non-structural maintenance of chromosomes
element 1 homolog" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0030915
"Smc5-Smc6 complex" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS]
InterPro:IPR014857 InterPro:IPR001965 InterPro:IPR011513
Pfam:PF07574 SMART:SM00249 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0006310 GO:GO:0004842
GO:GO:0000781 GO:GO:2001022 GO:GO:0030915 HSSP:Q8WV22 CTD:197370
eggNOG:NOG314368 HOGENOM:HOG000006778 HOVERGEN:HBG082058
OrthoDB:EOG498V1N PANTHER:PTHR20973 Pfam:PF08746 EMBL:BC061348
RefSeq:NP_989014.1 UniGene:Str.3292 ProteinModelPortal:Q6P881
SMR:Q6P881 GeneID:394610 KEGG:xtr:394610 Xenbase:XB-GENE-1006456
InParanoid:Q6P881 Uniprot:Q6P881
Length = 270
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 59/276 (21%), Positives = 115/276 (41%)
Query: 4 LNWKHHALVQALMTRGPLKEKDFHAIFSGL--TGKSPGAHQGLFNEYLLNINKELSSCQF 61
+N H +Q LM+ G ++ A+ K H L ++++ +NK L
Sbjct: 5 INESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNL-DDFVGVLNKHLQPLFM 63
Query: 62 ELRACRDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNI 121
++ + G Y +VN V ++ +K+ + Y ++ F+ +E I + G I
Sbjct: 64 KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 121
Query: 122 EALNI--RLENLVLSTQG-SQLLNGPLPAAF---RN--FTMSQK-EKTLDEFV----QDQ 168
LN+ L++ + + QLL + + RN +T+ + L+ ++ QD
Sbjct: 122 SILNLADELQSKKMKKKEVEQLLQSFVQDKWLIGRNGEYTLHTRCIMELEHYILNTYQDV 181
Query: 169 WLCCTPDGKIGLGVRSCLDLRGWFRNLDVPFCEVCNEAVVKG--EILCPRCGLRWPNQVP 226
C KI + + C N +P C +G LCP C WP+++P
Sbjct: 182 AKICNVCHKIAIQCQLC-------ENCGIPLHLQCAGIYFRGIANPLCPNCKESWPHEIP 234
Query: 227 KAEILDEEEVPNATIQSQPAQGPKRKRTKTNETHAK 262
+ + P+ + Q+ P +G + +R++ T A+
Sbjct: 235 DLSQVSSQG-PSHS-QAAPVRG-RNQRSRNISTVAR 267
>UNIPROTKB|Q3T0X7 [details] [associations]
symbol:NSMCE1 "Non-structural maintenance of chromosomes
element 1 homolog" species:9913 "Bos taurus" [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0030915 "Smc5-Smc6 complex" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR014857
InterPro:IPR002219 InterPro:IPR011513 Pfam:PF07574 GO:GO:0005634
GO:GO:0035556 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006310 GO:GO:0004842 GO:GO:0000781 GO:GO:2001022
GO:GO:0030915 HSSP:Q8WV22 EMBL:BC102214 IPI:IPI00700090
RefSeq:NP_001030483.1 UniGene:Bt.43646 ProteinModelPortal:Q3T0X7
SMR:Q3T0X7 GeneID:534249 KEGG:bta:534249 CTD:197370
eggNOG:NOG314368 HOGENOM:HOG000006778 HOVERGEN:HBG082058
InParanoid:Q3T0X7 OrthoDB:EOG498V1N NextBio:20876324
PANTHER:PTHR20973 Pfam:PF08746 Uniprot:Q3T0X7
Length = 266
Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
Identities = 66/263 (25%), Positives = 101/263 (38%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTGKSP-GAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E D + A +++ IN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEECDVKRLQKHCYKVHDCNATVEKLEDFINTINSVLESLYIEIKKG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ + + ++ F+ LE I S +NI LN+
Sbjct: 75 VTEDDGRPIYALVNLATTSVSKMASDFAENELDLFRKALELIIDSDTGFASSTNI--LNL 132
Query: 127 RLENLVLSTQGSQLLNGPLPAAFRNFTMSQKEK--TLDE---FVQDQWLCCT-PDGKIGL 180
++ L + L +N + +KE TL DQ++ T PD
Sbjct: 133 -VDQLKGKKMRKKEAEHVLQKFVQNKWLIEKEGEFTLHGRAILEMDQYIRETYPDA---- 187
Query: 181 GVRSCLDLRGWFRNLDVPFCEVCN-----EAVVK-----GEILCPRCGLRWPNQVPKAEI 230
V+ C R + CE C V K E CP C WP++VP E+
Sbjct: 188 -VKVCNICRSLL--IQGQSCETCGIRMHLPCVAKYFQSSSEPHCPHCNDYWPHEVP--EV 242
Query: 231 LDEEEVPNATIQSQPAQGPKRKR 253
D E+ T S+ + P R R
Sbjct: 243 FDPEK-ERETGMSRSNKRPSRSR 264
>MGI|MGI:1914961 [details] [associations]
symbol:Nsmce1 "non-SMC element 1 homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=ISO] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISO] InterPro:IPR014857 InterPro:IPR002219
InterPro:IPR011513 Pfam:PF07574 MGI:MGI:1914961 GO:GO:0005634
GO:GO:0035556 GO:GO:0046872 GO:GO:0006281 GO:GO:0006310
GO:GO:0004842 GO:GO:0000781 GO:GO:2001022 GO:GO:0030915 HSSP:Q8WV22
CTD:197370 eggNOG:NOG314368 HOGENOM:HOG000006778 HOVERGEN:HBG082058
OrthoDB:EOG498V1N PANTHER:PTHR20973 Pfam:PF08746
GeneTree:ENSGT00390000009084 EMBL:AK009715 EMBL:AK011011
EMBL:AK160217 EMBL:AK166410 EMBL:BC031848 EMBL:BC049558
IPI:IPI00387545 RefSeq:NP_080606.2 UniGene:Mm.4467
ProteinModelPortal:Q9D720 SMR:Q9D720 STRING:Q9D720
PhosphoSite:Q9D720 PaxDb:Q9D720 PRIDE:Q9D720
Ensembl:ENSMUST00000033006 GeneID:67711 KEGG:mmu:67711
UCSC:uc009jqa.2 InParanoid:Q9D720 NextBio:325337 Bgee:Q9D720
CleanEx:MM_NSMCE1 Genevestigator:Q9D720 Uniprot:Q9D720
Length = 266
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 8 HHALVQALMTRGPLKEKDFHAIFSGLTG-KSPGAHQGLFNEYLLNINKELSSCQFELRAC 66
H +Q LMT G L+E + + + A +++ NIN L S E++
Sbjct: 15 HRRFLQLLMTHGVLEEWEVRRLQNHCYQVHDRNATVDKLEDFINNINSVLESLYIEIKKG 74
Query: 67 RDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAIAQDVMAQGSISNIEALNI 126
+ G+ Y +VN SK+ T + ++ F+ LE I S +NI L
Sbjct: 75 VTEDDGRPIYALVNLATTSVSKMATDFAENELDLFRKALELIVDSETGFASSTNILNLVD 134
Query: 127 RLENLVL-STQGSQLLNGPLPAAFR-----NFTMSQKE-KTLDEFVQDQWLCCTPDGKIG 179
+L+ + + Q+L + + + FT+ + +++F+++ + PD
Sbjct: 135 QLKGKKMRKKEAEQVLQKFVQSKWLIEKEGEFTLHGRAILEMEQFIRESY----PDS--- 187
Query: 180 LGVRSCLDLRGWFRNLDVPFCEVCN-----EAVVK-----GEILCPRCGLRWPNQVPKAE 229
V+ C G + CE C V K E CP C WP+ +P E
Sbjct: 188 --VKMCNICHGLL--IQGQSCETCGIRMHLPCVAKYFQSIPEPHCPHCNDYWPHDIP--E 241
Query: 230 ILDEEEVPNATIQSQPAQGPKRKR 253
+ + E+ A I S+ ++ R R
Sbjct: 242 VYNPEKEREAGI-SKSSRKSLRTR 264
>UNIPROTKB|G4MZL2 [details] [associations]
symbol:MGG_01429 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR014857 InterPro:IPR011513 Pfam:PF07574
EMBL:CM001232 PANTHER:PTHR20973 Pfam:PF08746 RefSeq:XP_003714378.1
ProteinModelPortal:G4MZL2 EnsemblFungi:MGG_01429T0 GeneID:2679323
KEGG:mgr:MGG_01429 Uniprot:G4MZL2
Length = 326
Score = 102 (41.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 48/209 (22%), Positives = 93/209 (44%)
Query: 1 MPSLNWK--HHALVQALMTRGPLKEKDFHAIFSGLTG--KSPGAHQGLFNEY-------L 49
+P+ +W H +QA+M RG + ++ I S L KS GA +E +
Sbjct: 7 LPA-DWTNLHRGFLQAMMARGSMTLEEAQPILSSLHNAEKSVGAAGINMDEIEIEDLEAV 65
Query: 50 LNINKE-LSSCQFELRACRDQYVGQVCYGVVNNVADEQSKLGTKYTVQQIAFFKGILEAI 108
L++ +E +S ++++ R Q + + +N +D ++L T +T +++F K +L+AI
Sbjct: 66 LSMIREAISPLDYDIKKHRHQTTKEEVWAFININSDLSTQLATTHTADEMSFIKRLLDAI 125
Query: 109 AQDVMAQGSISNIEALNIRLENLVLSTQGSQLL--NGPLPAAF----RNFTMSQKEKTLD 162
D + I + + L T+ + L NG A+ + S+ + +
Sbjct: 126 F-DTYNKPRIELMCITADQARKLSRPTRNRESLGVNGDSGASQSATDKGLKHSEVDALMA 184
Query: 163 EFVQDQWLCCTPDGKIGLGVRSCLDLRGW 191
++ WL + G L R+ L+L W
Sbjct: 185 SLTEEGWLEKSAAGFYSLAPRALLELWSW 213
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 201 EVCNEAV--VKGEILCPRCGLRW 221
++C EA + + CP+C RW
Sbjct: 258 DICQEAFWRARRDKQCPKCQTRW 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 22 0.39 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 609 (65 KB)
Total size of DFA: 218 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.94u 0.12s 24.06t Elapsed: 00:00:01
Total cpu time: 23.94u 0.12s 24.06t Elapsed: 00:00:01
Start: Fri May 10 12:30:16 2013 End: Fri May 10 12:30:17 2013