Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022692
MERLKDCMEELLKFTLSSHIDETLDFDLGISSKFCTNLLQDDPNDAVSPSTSFDFDSDED
SLQGVPLYPLYKRLALALCRSVNCGAFCRTYKKVALMNEECFLEQKEEEWSQLILNKGSS
DLVDILKAVEFELHVQEPFFSFIKDGLETVEGRCTISDYNSIGPGSVILLNKCMMLKVQS
VCHYDSFSEMLEAESLVKVLPGVKTIEEVLQVYKFIENSTQRRRKGPMVSLQYAFPKWLL
SPMLHWPAYCLDSVMWAFKAFWVFRILLERFQMHSHHQDQLFSHHSCCLLSQM

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022692
        (293 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:5019474741 - symbol:AT2G43465 "AT2G43465" spec...   463  6.4e-44   1
TAIR|locus:2099699 - symbol:AT3G03320 "AT3G03320" species...   340  1.2e-39   2


>TAIR|locus:5019474741 [details] [associations]
            symbol:AT2G43465 "AT2G43465" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 InterPro:IPR015947 SUPFAM:SSF88697
            InterPro:IPR007374 Pfam:PF04266 SMART:SM01022 IPI:IPI00527995
            RefSeq:NP_001154572.1 UniGene:At.74539 ProteinModelPortal:F4IR54
            SMR:F4IR54 PRIDE:F4IR54 EnsemblPlants:AT2G43465.1 GeneID:7922418
            KEGG:ath:AT2G43465 OMA:PYMEDGH Uniprot:F4IR54
        Length = 388

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 96/227 (42%), Positives = 147/227 (64%)

Query:     1 MERLKDCMEELLKFTLSSHIDETLDFDLGISSKFCTNLLQDDPNDAVXXXXXXXXXXXXX 60
             M +++DC++E++KFTL    D  ++FD+G++ +FC+ LL  +                  
Sbjct:     1 MIKIRDCLDEMVKFTL----DYCVEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALLH 56

Query:    61 XLQGVPLYPLYKRLALALCRSVNCGAFCRTYKKVALMNEECFLEQKEEEWSQLILNKGSS 120
                GVP YPLYK LAL L +S++ G+FC T++K++L  E   L++KE+EWS+LI  KGS 
Sbjct:    57 RFSGVPDYPLYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKGS- 115

Query:   121 DLVDILKAVEFELHVQEPFFSFIKDGLETVEGRCTISDYNSIGPG-SVILLNKCMMLKVQ 179
             +LV+ LK V  EL VQEP FS +KDG++TVE RC   +Y+ I  G S++++NKC+M +V 
Sbjct:   116 ELVNALKDVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEVL 175

Query:   180 SVCHYDSFSEMLEAESLVKVLPGVKTIEEVLQVYKFIENSTQRRRKG 226
              +  Y SF E+L+AES  KV PG KT+EE +Q+++ + ++ Q    G
Sbjct:   176 ELHQYASFYELLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNG 222


>TAIR|locus:2099699 [details] [associations]
            symbol:AT3G03320 "AT3G03320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR015947
            SUPFAM:SSF88697 EMBL:AC009895 InterPro:IPR007374 Pfam:PF04266
            SMART:SM01022 UniGene:At.41001 UniGene:At.43920 EMBL:AY140013
            EMBL:BT009658 IPI:IPI00541051 RefSeq:NP_566202.1
            ProteinModelPortal:Q9SRN6 SMR:Q9SRN6 PRIDE:Q9SRN6
            EnsemblPlants:AT3G03320.1 GeneID:821284 KEGG:ath:AT3G03320
            TAIR:At3g03320 OMA:TVEGRCA PhylomeDB:Q9SRN6 ProtClustDB:CLSN2917081
            ArrayExpress:Q9SRN6 Genevestigator:Q9SRN6 Uniprot:Q9SRN6
        Length = 244

 Score = 340 (124.7 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 72/151 (47%), Positives = 101/151 (66%)

Query:    91 YKKVALMNEECFLEQKE-----EEWSQLILNKGSSDLVDILKAVEFELHVQEPFFSFIKD 145
             YK +A    EC   + +     E++S+LI   G  DL+++LK V FELHVQEP+F+ +KD
Sbjct:    63 YKLLATALSECLASEGDKNSNLEKYSKLIHGLGY-DLINMLKEVNFELHVQEPYFTQLKD 121

Query:   146 GLETVEGRCTISDYNSIGPGSVILLNKCMMLKVQSVCHYDSFSEMLEAESLVKVLPGVKT 205
             GL+TVEGRC + DY  I  G  +L NKC++L+VQ V  Y SFSEML+ E L KVLPGV++
Sbjct:   122 GLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAKVLPGVES 181

Query:   206 IEEVLQVYKFIENSTQRRRKGPMVSLQYAFP 236
             IEE +QVY+   +  + R  G +V+++ A P
Sbjct:   182 IEEGVQVYRNFYSEEKERMNG-VVAIRVAKP 211

 Score = 99 (39.9 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query:     4 LKDCMEELLKFTLSSHIDETL-DFDLGISSKFCTNLL 39
             L++CME LL+F+L SH++E++  FDL ++  FC +LL
Sbjct:    14 LRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLL 50


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      293       279   0.00081  115 3  11 22  0.43    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  230 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.75u 0.11s 22.86t   Elapsed:  00:00:01
  Total cpu time:  22.75u 0.11s 22.86t   Elapsed:  00:00:01
  Start:  Fri May 10 12:31:16 2013   End:  Fri May 10 12:31:17 2013

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