Query 022693
Match_columns 293
No_of_seqs 80 out of 82
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 09:38:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3buu_A Uncharacterized LOLA su 97.6 0.0025 8.5E-08 53.1 14.8 171 30-241 44-224 (229)
2 3bk5_A Putative outer membrane 97.3 0.0099 3.4E-07 50.0 15.1 178 27-240 38-233 (237)
3 2yzy_A Putative uncharacterize 80.9 2.4 8.2E-05 35.7 5.4 68 49-123 64-140 (200)
4 3m4w_A Sigma-E factor regulato 76.8 3.1 0.00011 37.8 5.2 55 89-156 95-149 (295)
5 3tu8_A Burkholderia lethal fac 62.0 4.2 0.00014 35.6 2.6 25 39-64 81-105 (210)
6 3mh9_C Lipoprotein LPRG; mutan 39.3 74 0.0025 27.7 6.8 92 27-129 60-155 (218)
7 2g9g_A Pngase, peptide N-glyca 24.1 54 0.0018 29.3 3.3 37 30-66 145-197 (221)
8 2i74_A Pngase; beta-sandwich, 23.8 51 0.0018 28.8 3.1 38 29-66 104-157 (189)
9 3d9y_A Profilin; yeast, actin- 23.1 44 0.0015 26.4 2.4 61 54-131 22-85 (127)
10 3nul_A Profilin I; cytoskeleto 21.4 71 0.0024 25.4 3.3 59 55-131 25-88 (130)
No 1
>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=97.59 E-value=0.0025 Score=53.14 Aligned_cols=171 Identities=11% Similarity=0.109 Sum_probs=101.0
Q ss_pred eeEEEEeeCCCceEEEEe----eCCceeeeccCCceeeeecCCCCccc-cCCCCchh----hhhhcCCCccccccceeee
Q 022693 30 GGFVLWQMNPDMWYVELA----LGDSKVHAGCNGKLVWRHTPWLGAHA-AKGPVRPL----RRALQGLDPRTTASMFINA 100 (293)
Q Consensus 30 GgFVlWQ~~Pd~W~~ELv----VgG~KV~AGsdGkvaWRhTpw~g~Ha-akGp~RPL----RR~lQGLDPr~ta~lF~~A 100 (293)
--+.+|.+.|++-++.+. +-|..+. .+|+-+|--.|-+..-. ..+..+-+ -.-+.++++ + =.-+.
T Consensus 44 ~~~~~~~~~~~~~~~~~~~P~~~~g~~~l--~~~~~~w~y~P~~~~v~r~~~~~~~~g~~~~~d~~~~~~---~-~~y~~ 117 (229)
T 3buu_A 44 YRYQVLSKGNENSIVMITEPASERGQAIL--MKGRDLWVFMPSVSQPIRLSLSQRLTGQVANGDIARANF---T-GDYHP 117 (229)
T ss_dssp EEEEEEEETTTEEEEEEEESTTTTTCEEE--EETTEEEEECTTCSSCEEECTTSEEETTEEHHHHHCCCS---B-TTEEE
T ss_pred EEEEEEecCCceEEEEEeCChhhcCeEEe--ecCCceEEECCCCCceEEccCcccccccccccccccCCc---c-ccCce
Confidence 347789998887666654 4566666 38999999999775421 11111101 112223332 1 12345
Q ss_pred eeeeeeeecCceeeEEEeecCccccccccCCCceEEEeeeeeccccccceeEEeeceeeeeeecCCCCeeEEEeeccccc
Q 022693 101 RCIGEKKINGEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDAVYWETTINSFL 180 (293)
Q Consensus 101 ~cvGEk~i~gedCFiLkl~~~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lEDS~LtRIqs~~~~~vyWETTieS~i 180 (293)
..+|++.++|.+|++|++.+.... +.-+ +. .=|++++|+|+++.+-- . ..| --|++.. .
T Consensus 118 ~l~g~~~v~g~~~~vl~~~pk~~~---~~y~-----k~--~lwiD~~t~~p~k~~~~-----d-~~G--~l~k~~~---~ 176 (229)
T 3buu_A 118 QLLRNESIDDEDYYVLELTGIDRS---VTYQ-----KV--LLWVNQSNFRPYKAEFY-----S-VSG--RLLKTSR---Y 176 (229)
T ss_dssp EEEEEEEETTEEEEEEEEEESSTT---SSCS-----EE--EEEEETTTCCEEEEEEE-----C-TTS--CEEEEEE---E
T ss_pred EEeeeeeeCCeeEEEEEEEecCCC---CceE-----EE--EEEEECCCCcEEEEEEE-----c-CCC--CEEEEEE---e
Confidence 789999999999999999886652 1100 11 12678999998887541 1 122 2455433 5
Q ss_pred ccccccCceeeecCCcceEEEEEecC-cccccccceeeeeeeeeeeeecCCCCCccccCCCc
Q 022693 181 DDYRPVEGIMIAHSGRSIVTLFRFGD-TAMSHTRTRMEEAWAIDEVAFNVPGLSVDCFIPPA 241 (293)
Q Consensus 181 ~DYR~VdGi~IAH~G~t~vtl~RfGe-~~~~h~~TrMEE~WtIeeV~FNV~GLS~DcFiPP~ 241 (293)
.+|..++|+.+++.- .+-+ ...+| .|.|+ +.++.|| +|+-+.|-|..
T Consensus 177 ~~~~~~~g~~~~~~~-------~~~d~~~~g~-~t~~~----~~~~~~~--~l~~~~Ft~~~ 224 (229)
T 3buu_A 177 ENFDNILGEMRPTRI-------IMEDALKSGE-VSVLD----YSDMKLR--DLPDKIFTKDY 224 (229)
T ss_dssp EEEEEETTEEEEEEE-------EEEESSSSCC-EEEEE----EEEEEEC--CCCGGGSSTGG
T ss_pred eccEEECCEEEeEEE-------EEEeCcCCCC-EEEEE----EeeeEeC--CCChHhCCHHH
Confidence 567777876665431 1111 11223 45654 6689998 89888886643
No 2
>3bk5_A Putative outer membrane lipoprotein-sorting prote; putative outer membrane protein domain, PSI-2, protein struc initiative; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.31 E-value=0.0099 Score=50.04 Aligned_cols=178 Identities=14% Similarity=0.185 Sum_probs=103.4
Q ss_pred cceeeEEEEeeCC----CceEEEEe----eCCceeee---ccCCceeeeecCCCCccccCCCCchhhhhhcCCCcc----
Q 022693 27 AESGGFVLWQMNP----DMWYVELA----LGDSKVHA---GCNGKLVWRHTPWLGAHAAKGPVRPLRRALQGLDPR---- 91 (293)
Q Consensus 27 ~e~GgFVlWQ~~P----d~W~~ELv----VgG~KV~A---GsdGkvaWRhTpw~g~HaakGp~RPLRR~lQGLDPr---- 91 (293)
....-|.+|.+.| ++-.+++. +-|..+.. -.+|+-+|-..|-+.. .-|=|.......+-|.|--
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~G~~~L~~~~~~~~~~~w~y~P~~~r-v~ri~~~~~~~~~~~s~~~~~d~ 116 (237)
T 3bk5_A 38 SSTRLMRLKSLEVEGDGDKGLTIFDQPRDVTGTAFLNHSHTIGADDQWLYLPALKR-VKRISSRNKSGPFMGSEFAYEDL 116 (237)
T ss_dssp CEEEEEEEEEECCTTSCCEEEEEEEESTTTTTCEEEEECCSSSCCEEEEEETTTTE-EEECCGGGTTSBSTTSSCBGGGG
T ss_pred EEEEEEEeecccCCCCCcEEEEEEECchHhCCcEEEEEEcCCCCccceeEccccCc-eEEcCccccCCCccccccChhHh
Confidence 4446788999888 55556655 56777663 1289999999997643 2222221111111122210
Q ss_pred --ccccceeeeeeeeeeeecCceeeEEEeecCccccccccCCCceEEEeeeeeccccccceeEEeeceeeeeeecCCCCe
Q 022693 92 --TTASMFINARCIGEKKINGEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLEDSHLTRIQNNGGDA 169 (293)
Q Consensus 92 --~ta~lF~~A~cvGEk~i~gedCFiLkl~~~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lEDS~LtRIqs~~~~~ 169 (293)
....-| +...+|+++++|.+|++|++.+.... | ..-+.. =|.++.|+|+++.+-- . ..|.
T Consensus 117 ~~~~~~~y-~~~l~g~~~~~g~~~~vl~~~pk~~~---~-----~y~k~~--~wiD~~t~~~~k~~~~-----d-~~G~- 178 (237)
T 3bk5_A 117 SSFEIEKY-RFNHLKDEKFNGQDVFVLEQIPTDKN---S-----GYTKQV--VWLDKAHYRPLKVEFY-----D-RKGA- 178 (237)
T ss_dssp SCCCGGGE-EEEEEEEEEETTEEEEEEEEEESCTT---S-----SEEEEE--EEEETTTCCEEEEEEE-----E-TTSC-
T ss_pred hccccccc-ceEEeeeeEECCeeEEEEEEEECCCC---C-----CceEEE--EEEECCCCeEEEEEEE-----c-CCCC-
Confidence 011222 46899999999999999999886652 1 111122 2679999999988631 1 2222
Q ss_pred eEEEeecccccccccccCc-eeeecCCcceEEEEEecCcccccccceeeeeeeeeeeeecCCCCCccccCCC
Q 022693 170 VYWETTINSFLDDYRPVEG-IMIAHSGRSIVTLFRFGDTAMSHTRTRMEEAWAIDEVAFNVPGLSVDCFIPP 240 (293)
Q Consensus 170 vyWETTieS~i~DYR~VdG-i~IAH~G~t~vtl~RfGe~~~~h~~TrMEE~WtIeeV~FNV~GLS~DcFiPP 240 (293)
-|++-. +.+|+.++| +.+++.- .+-+...+| .|.|+ +.++.||. +|+-+.|-|.
T Consensus 179 -l~~~~~---~~~~~~~~g~~~~~~~~-------~~~dl~~g~-~t~~~----~~~~~~~~-~~~~~~Ft~~ 233 (237)
T 3bk5_A 179 -LLKTLT---FANYKQYLDKYWRAHTM-------AMTNHQTGK-STELN----TSDLRFQT-GLEENDFNKN 233 (237)
T ss_dssp -EEEEEE---EEEEEEETTTEEEEEEE-------EEEETTTCC-EEEEE----EEEEEECC-CCCGGGGCGG
T ss_pred -EEEEEE---EeeeEEEcceEEEEEEE-------EEEECCCCC-EEEEE----EeeEEeCC-CCChHhCCHH
Confidence 344432 346777788 6655432 222212233 45665 55999994 7887777553
No 3
>2yzy_A Putative uncharacterized protein TTHA1012; uncharacterized conserved protein, structural genomics, UNKN function, NPPSFA; 1.60A {Thermus thermophilus}
Probab=80.90 E-value=2.4 Score=35.74 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=34.7
Q ss_pred CCceeeeccCCceeeeecCCCCccccCCCCchhhhhhc-CCCcccccccee--------eeeeeeeeeecCceeeEEEee
Q 022693 49 GDSKVHAGCNGKLVWRHTPWLGAHAAKGPVRPLRRALQ-GLDPRTTASMFI--------NARCIGEKKINGEDCFILKLC 119 (293)
Q Consensus 49 gG~KV~AGsdGkvaWRhTpw~g~HaakGp~RPLRR~lQ-GLDPr~ta~lF~--------~A~cvGEk~i~gedCFiLkl~ 119 (293)
.|..++ +||+-.|...|-... + -.+|+.+.++ ++. ..-+.|.. +...+||+.++|.+|++|.+.
T Consensus 64 ~g~~~l--~~g~~~W~y~p~~~q-v---~i~~~~~~~~~~mg-~~~~~l~~~~~l~~~y~~~~~~~e~~~g~~~~~le~~ 136 (200)
T 2yzy_A 64 EGNFTV--ITEKEVWNYLYLTNQ-L---VISPREKAKIQGLG-FAPQGLGDLKALSEQVDLRLEGEVRLPEGMAWKLVGR 136 (200)
T ss_dssp TTCEEE--ECSSCEEEEETTTTE-E---EEEC-------------------------CCEEEEEEEEEETTEEEEEEEEE
T ss_pred cCeEEE--ecCchheeecCCcCe-E---EEeCcccccCcccC-cCHHHhhccccccccceEEEEEEEEeCCccEEEEEEE
Confidence 455555 489999998876521 2 2334433222 211 11112221 125789999999999999988
Q ss_pred cCcc
Q 022693 120 ADPS 123 (293)
Q Consensus 120 ~~~~ 123 (293)
+...
T Consensus 137 Pk~~ 140 (200)
T 2yzy_A 137 SKEN 140 (200)
T ss_dssp C---
T ss_pred ECCC
Confidence 8554
No 4
>3m4w_A Sigma-E factor regulatory protein RSEB; RSEA, RSEB, RSEP, stress response, sigma factor, periplasm, membrane, transmembrane; 2.30A {Escherichia coli} PDB: 2p4b_A 2v43_A 2v42_A
Probab=76.83 E-value=3.1 Score=37.79 Aligned_cols=55 Identities=13% Similarity=0.355 Sum_probs=40.4
Q ss_pred CccccccceeeeeeeeeeeecCceeeEEEeecCccccccccCCCceEEEeeeeeccccccceeEEeec
Q 022693 89 DPRTTASMFINARCIGEKKINGEDCFILKLCADPSTLKARSEGPAEIIRHVLFGYFSQKTGLLVHLED 156 (293)
Q Consensus 89 DPr~ta~lF~~A~cvGEk~i~gedCFiLkl~~~~~~l~arS~~~~EiirH~~~GYFSQrtGLLv~lED 156 (293)
|+...+..| +...+|+.+|+|-+|.+|++.+... .| -.|.+ |-++.|||++|.|-
T Consensus 95 ~~~~l~~~Y-~~~~~g~erVaGr~~~vv~l~PkD~---~r-------y~y~l--WiD~et~lpLk~e~ 149 (295)
T 3m4w_A 95 DFKRLSPYY-DFISVGRTRIADRLCEVIRVVARDG---TR-------YSYIV--WMDTESKLPMRVDL 149 (295)
T ss_dssp CHHHHTTTE-EEEEEEEEEETTEEEEEEEEEETTS---CS-------CEEEE--EEETTTCCEEEEEE
T ss_pred ChhHHhhCc-eEEEcCceEECCeEEEEEEEEECCC---Cc-------eeEEE--EEEccCCCEEEEEE
Confidence 444444444 4568999999999999999987554 11 23444 67999999999875
No 5
>3tu8_A Burkholderia lethal factor 1 (BLF1); toxin, unknown function; 1.04A {Burkholderia pseudomallei} PDB: 3tua_A
Probab=62.01 E-value=4.2 Score=35.59 Aligned_cols=25 Identities=40% Similarity=0.708 Sum_probs=21.4
Q ss_pred CCceEEEEeeCCceeeeccCCceeee
Q 022693 39 PDMWYVELALGDSKVHAGCNGKLVWR 64 (293)
Q Consensus 39 Pd~W~~ELvVgG~KV~AGsdGkvaWR 64 (293)
-||-.+-..++||||.|| ||.++|.
T Consensus 81 vdmlfftyylsgckvfag-dggpvwh 105 (210)
T 3tu8_A 81 VDMLFFTYYLSGCKVFAG-DGGPVWH 105 (210)
T ss_dssp TTCEEEECCBSSCEEEEE-TTSCEEE
T ss_pred hhhhhhhhhhccceEEec-CCCceee
Confidence 478889999999999998 6778885
No 6
>3mh9_C Lipoprotein LPRG; mutant LPRG, glycolipid binding protein, lipid protein, structural genomics, TB structural genomics consor TBSGC; 1.79A {Mycobacterium tuberculosis} SCOP: b.125.1.0 PDB: 3mha_A* 3mh8_A*
Probab=39.32 E-value=74 Score=27.71 Aligned_cols=92 Identities=22% Similarity=0.302 Sum_probs=56.0
Q ss_pred cceeeEEEEeeCCCceEEEEeeCCceeeeccCCceeeeecCCCCccccCCCCchhhhhhcCCCccc-cccc---eeeeee
Q 022693 27 AESGGFVLWQMNPDMWYVELALGDSKVHAGCNGKLVWRHTPWLGAHAAKGPVRPLRRALQGLDPRT-TASM---FINARC 102 (293)
Q Consensus 27 ~e~GgFVlWQ~~Pd~W~~ELvVgG~KV~AGsdGkvaWRhTpw~g~HaakGp~RPLRR~lQGLDPr~-ta~l---F~~A~c 102 (293)
..+|.--+.....+. -+|+++-|.++-+.-.++ +|+-.-.+.--..| .+-|||.. .++| +.+.+.
T Consensus 60 aa~g~~t~~~~g~~~-~ve~v~vd~~lY~~~~~~------~w~~~~~a~~~~d~----~~~ldP~~gl~~lL~~~~dv~~ 128 (218)
T 3mh9_C 60 AATGNWKLTLGGSDI-DADFVVFDGILYATLTPN------QWSDFGPAADIYDP----AQVLNPDTGLANVLANFADAKA 128 (218)
T ss_dssp EEEEEEEEEETTEEE-EEEEEEETTEEEEEEETT------EEEEEEEGGGTCCG----GGGTCTTTSHHHHHHTEEEEEE
T ss_pred ceeeEEEEecCCccc-ceEEEEECCEEEEecCCC------CceEcCccccccCh----hhhcCHHHHHHHHHHhcCCcee
Confidence 344544443333323 688887666666655433 44432111101112 33488864 3554 788899
Q ss_pred eeeeeecCceeeEEEeecCcccccccc
Q 022693 103 IGEKKINGEDCFILKLCADPSTLKARS 129 (293)
Q Consensus 103 vGEk~i~gedCFiLkl~~~~~~l~arS 129 (293)
+|+++|||.....++-.-+++.+.+-.
T Consensus 129 ~G~EtvdGv~t~~~tGtv~~~~~~~~~ 155 (218)
T 3mh9_C 129 EGRDTINGQNTIRISGKVSAQAVNQIA 155 (218)
T ss_dssp EEEEEETTEEEEEEEEEECHHHHHHHC
T ss_pred cceeEECCEEEEEEEEEECHHHHhhhc
Confidence 999999999999999888887776543
No 7
>2g9g_A Pngase, peptide N-glycanase; beta-sandwich, hydrolase; 2.00A {Mus musculus} SCOP: b.18.1.29
Probab=24.06 E-value=54 Score=29.31 Aligned_cols=37 Identities=27% Similarity=0.528 Sum_probs=26.7
Q ss_pred eeEEEEeeCCCceEEEEeeCCce-----------e-----eeccCCceeeeec
Q 022693 30 GGFVLWQMNPDMWYVELALGDSK-----------V-----HAGCNGKLVWRHT 66 (293)
Q Consensus 30 GgFVlWQ~~Pd~W~~ELvVgG~K-----------V-----~AGsdGkvaWRhT 66 (293)
+|-|.|+..++-=|+|+...|.- + ..|-+|.+||-|+
T Consensus 145 ~G~v~~~i~~~~~c~~ip~~~~l~t~e~~~~~~~~~I~a~Lsgg~g~~aWQha 197 (221)
T 2g9g_A 145 SGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 197 (221)
T ss_dssp TCEEEEEEECSSCEEEECCEEEEEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred CCEEEEEEeCCCceEEecCCCceEeeccCCCCcEEEEEEEEeCCCCcccchhh
Confidence 77889999888889985544322 1 3577888998775
No 8
>2i74_A Pngase; beta-sandwich, hydrolase; HET: MAN; 1.75A {Mus musculus} SCOP: b.18.1.29 PDB: 2g9f_A
Probab=23.78 E-value=51 Score=28.76 Aligned_cols=38 Identities=26% Similarity=0.516 Sum_probs=27.8
Q ss_pred eeeEEEEeeCCCceEEEEeeCCce-----------e-----eeccCCceeeeec
Q 022693 29 SGGFVLWQMNPDMWYVELALGDSK-----------V-----HAGCNGKLVWRHT 66 (293)
Q Consensus 29 ~GgFVlWQ~~Pd~W~~ELvVgG~K-----------V-----~AGsdGkvaWRhT 66 (293)
.+|=|.|+..++-=|+|+.-.|.- + -.|-+|.+||.|+
T Consensus 104 ~~G~v~~~~~~~~~c~~i~~~~~l~t~e~~~~~~~~~i~a~LsgG~g~~aWQha 157 (189)
T 2i74_A 104 ESGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 157 (189)
T ss_dssp TTCEEEEEEECSSCEEEECCBSCCEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred cCCEEEEEEecCCcEEEecCCCceEEEccCCCCcEEEEEEEEeCCCccccchhh
Confidence 367789999988889996655422 1 3588888998775
No 9
>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A
Probab=23.09 E-value=44 Score=26.41 Aligned_cols=61 Identities=16% Similarity=0.358 Sum_probs=35.0
Q ss_pred eeccCCceeeeecCCCCccccCCCCch--hhhhhcCC-CccccccceeeeeeeeeeeecCceeeEEEeecCccccccccC
Q 022693 54 HAGCNGKLVWRHTPWLGAHAAKGPVRP--LRRALQGL-DPRTTASMFINARCIGEKKINGEDCFILKLCADPSTLKARSE 130 (293)
Q Consensus 54 ~AGsdGkvaWRhTpw~g~HaakGp~RP--LRR~lQGL-DPr~ta~lF~~A~cvGEk~i~gedCFiLkl~~~~~~l~arS~ 130 (293)
+.|-||.-+|-+||-. ...| ++.+...+ ||.. +|.+-- .++|+.|++|+-+ +..+.+|.+
T Consensus 22 I~g~dG~svwA~s~gf-------~~~p~E~~~i~~~f~d~~~---~~~~Gl-----~l~G~Ky~vir~d--~~~i~~kkg 84 (127)
T 3d9y_A 22 IVSRAGDSVWAASAGF-------NLSPQEIQGLAAGFQDPPS---MFGTGI-----ILAGQKYITIRAE--GRSIYGKLQ 84 (127)
T ss_dssp EEETTSSCEEEECTTC-------CCCHHHHHHHHHHHHSTTH---HHHHCE-----EETTEEEEEEEEC--SSEEEEEET
T ss_pred EEeCCCCeEEEeCCCC-------ccCHHHHHHHHHHhcCcch---hhcCCE-----EEcCeEEEEEEeC--cceEEEEcC
Confidence 3478997779999853 2344 22222222 4433 333333 4678999999965 444666554
Q ss_pred C
Q 022693 131 G 131 (293)
Q Consensus 131 ~ 131 (293)
.
T Consensus 85 ~ 85 (127)
T 3d9y_A 85 K 85 (127)
T ss_dssp T
T ss_pred C
Confidence 4
No 10
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=21.40 E-value=71 Score=25.43 Aligned_cols=59 Identities=12% Similarity=0.412 Sum_probs=33.6
Q ss_pred eccCCceeeeecCCCCccccCCCCch-----hhhhhcCCCccccccceeeeeeeeeeeecCceeeEEEeecCcccccccc
Q 022693 55 AGCNGKLVWRHTPWLGAHAAKGPVRP-----LRRALQGLDPRTTASMFINARCIGEKKINGEDCFILKLCADPSTLKARS 129 (293)
Q Consensus 55 AGsdGkvaWRhTpw~g~HaakGp~RP-----LRR~lQGLDPr~ta~lF~~A~cvGEk~i~gedCFiLkl~~~~~~l~arS 129 (293)
.|-||.+ |-+||-.. ...| |-..+. ||.. +|.+-- .++|+.|++|+-+.+. .+.++.
T Consensus 25 ig~dGsv-WA~s~gf~------~~~p~E~~~i~~~f~--d~~~---~~~~Gl-----~l~G~Ky~~ir~d~~~-~i~~kk 86 (130)
T 3nul_A 25 LGQDGSV-WAQSAKFP------QLKPQEIDGIKKDFE--EPGF---LAPTGL-----FLGGEKYMVIQGEQGA-VIRGKK 86 (130)
T ss_dssp EETTSCE-EEECTTCC------CCCHHHHHHHHHHHH--STTS---STTTCE-----EETTEEEEEEEEETTT-EEEEEE
T ss_pred EeCCCCE-EEcCCCcc------cCCHHHHHHHHHhcc--Cchh---hccCCE-----EECCeEEEEEEeCCCc-EEEEec
Confidence 4779985 99988531 1233 333333 4432 333333 4678999999986533 355555
Q ss_pred CC
Q 022693 130 EG 131 (293)
Q Consensus 130 ~~ 131 (293)
+.
T Consensus 87 g~ 88 (130)
T 3nul_A 87 GP 88 (130)
T ss_dssp TT
T ss_pred CC
Confidence 44
Done!