Query 022693
Match_columns 293
No_of_seqs 80 out of 82
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 09:38:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022693.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022693hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btea_ g.7.1.3 (A:) Type II a 32.6 12 0.00086 27.9 2.5 22 28-51 32-53 (96)
2 d2i74a1 b.18.1.29 (A:472-651) 31.8 14 0.001 30.1 3.1 40 27-66 101-156 (180)
3 d1ypra_ d.110.1.1 (A:) Profili 30.0 12 0.00088 27.7 2.2 63 54-132 20-84 (125)
4 d2h62d1 g.7.1.3 (D:8-98) Type 27.7 14 0.001 27.3 2.2 23 27-51 30-52 (91)
5 d1tdja3 d.58.18.2 (A:424-514) 22.5 15 0.0011 26.6 1.5 42 77-118 18-69 (91)
6 d2byoa1 b.125.1.3 (A:20-207) P 22.2 41 0.003 26.5 4.1 75 44-130 64-142 (188)
7 d1qwta_ b.26.1.3 (A:) Interfer 14.7 63 0.0046 26.7 3.8 42 30-81 82-123 (239)
8 d1tdja2 d.58.18.2 (A:336-423) 13.4 29 0.0021 24.8 1.1 22 77-99 11-34 (88)
9 d1jpca_ b.78.1.1 (A:) Lectin ( 12.3 1.3E+02 0.0093 20.9 4.4 36 30-65 36-75 (108)
10 d1sdwa1 b.121.1.2 (A:45-198) P 11.8 39 0.0029 25.7 1.4 30 111-140 35-66 (154)
No 1
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.63 E-value=12 Score=27.95 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=16.6
Q ss_pred ceeeEEEEeeCCCceEEEEeeCCc
Q 022693 28 ESGGFVLWQMNPDMWYVELALGDS 51 (293)
Q Consensus 28 e~GgFVlWQ~~Pd~W~~ELvVgG~ 51 (293)
..+||+||+..++. ++|+.=|+
T Consensus 32 ~~~Cf~lW~~~~g~--~~i~~qGC 53 (96)
T d1btea_ 32 RRHCFATWKNISGS--IEIVKQGC 53 (96)
T ss_dssp CCEEEEEEEEETTE--EEEEEEEE
T ss_pred cCceEEecccCCCC--EEEEEecC
Confidence 47899999999887 55555554
No 2
>d2i74a1 b.18.1.29 (A:472-651) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.82 E-value=14 Score=30.11 Aligned_cols=40 Identities=23% Similarity=0.483 Sum_probs=28.9
Q ss_pred cceeeEEEEeeCCCceEEEEeeC----------C-ce--e---eeccCCceeeeec
Q 022693 27 AESGGFVLWQMNPDMWYVELALG----------D-SK--V---HAGCNGKLVWRHT 66 (293)
Q Consensus 27 ~e~GgFVlWQ~~Pd~W~~ELvVg----------G-~K--V---~AGsdGkvaWRhT 66 (293)
..-+|=|.|+..-+.=|+++.-+ | .| + .+|.||.+||-|+
T Consensus 101 tf~~G~v~~~~~~~~~~~~i~~d~~~~~~~~~~ga~~~~i~a~LsGG~g~~aWQHa 156 (180)
T d2i74a1 101 SFESGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 156 (180)
T ss_dssp ECTTCEEEEEEECSSCEEEECCBSCCEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred EECCCEEEEEEEcCCceEEecCCCceeEecCcCCCeEEEEEEEEeCCCccccchhh
Confidence 34578888999888888887542 3 12 2 4688999999876
No 3
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.05 E-value=12 Score=27.74 Aligned_cols=63 Identities=22% Similarity=0.441 Sum_probs=38.9
Q ss_pred eeccCCceeeeecCCCCccccCCCCch--hhhhhcCCCccccccceeeeeeeeeeeecCceeeEEEeecCccccccccCC
Q 022693 54 HAGCNGKLVWRHTPWLGAHAAKGPVRP--LRRALQGLDPRTTASMFINARCIGEKKINGEDCFILKLCADPSTLKARSEG 131 (293)
Q Consensus 54 ~AGsdGkvaWRhTpw~g~HaakGp~RP--LRR~lQGLDPr~ta~lF~~A~cvGEk~i~gedCFiLkl~~~~~~l~arS~~ 131 (293)
+.|-||.-+|-.||-. ++-| ++.++..++..+ .++.+- =.++|+.|++|+- |+..+.+|...
T Consensus 20 I~g~dg~svwA~S~gf-------~~~~~E~~~i~~~f~~~~--~~~~~G-----i~i~G~KY~~~~~--d~~~i~~kk~~ 83 (125)
T d1ypra_ 20 IYSRAGDAVWATSGGL-------SLQPNEIGEIVQGFDNPA--GLQSNG-----LHIQGQKFMLLRA--DDRSIYGRHDA 83 (125)
T ss_dssp EEETTSCCEEEEESCC-------CCCHHHHHHHHHHTTCTH--HHHHHC-----EEETTEEEEEEEE--CSSEEEEEETT
T ss_pred EEeCCCCeeEEECCCC-------CCCHHHHHHHHHHhcCcc--hhccCC-----EEEcCeEEEEEec--CCCeEEEEeCC
Confidence 6788999899999843 2334 455555553322 122221 2467999999984 45567776655
Q ss_pred C
Q 022693 132 P 132 (293)
Q Consensus 132 ~ 132 (293)
.
T Consensus 84 ~ 84 (125)
T d1ypra_ 84 E 84 (125)
T ss_dssp E
T ss_pred C
Confidence 3
No 4
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus musculus), isoform IIB [TaxId: 10090]}
Probab=27.66 E-value=14 Score=27.31 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=18.0
Q ss_pred cceeeEEEEeeCCCceEEEEeeCCc
Q 022693 27 AESGGFVLWQMNPDMWYVELALGDS 51 (293)
Q Consensus 27 ~e~GgFVlWQ~~Pd~W~~ELvVgG~ 51 (293)
....||+||+..++- ++|+.=|+
T Consensus 30 k~~~Cy~lW~~~~~~--i~i~~qGC 52 (91)
T d2h62d1 30 KRLHCYASWRNSSGT--IELVKKGC 52 (91)
T ss_dssp CCEEEEEEEEEETTE--EEEEEEEE
T ss_pred CCCccEEEeecCCCC--EEEEEecc
Confidence 356899999999876 66777666
No 5
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.51 E-value=15 Score=26.61 Aligned_cols=42 Identities=26% Similarity=0.195 Sum_probs=22.7
Q ss_pred CCch--hhhhhcCCCccccccceee--------eeeeeeeeecCceeeEEEe
Q 022693 77 PVRP--LRRALQGLDPRTTASMFIN--------ARCIGEKKINGEDCFILKL 118 (293)
Q Consensus 77 p~RP--LRR~lQGLDPr~ta~lF~~--------A~cvGEk~i~gedCFiLkl 118 (293)
|.|| |++|++-|.|+.-=++|.= ...||...-+.++++.=+|
T Consensus 18 PErpGal~~Fl~~l~~~~nITeF~YR~~~~~~a~VlvGi~~~~~~~~l~~~L 69 (91)
T d1tdja3 18 PESPGALLRFLNTLGTYWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRL 69 (91)
T ss_dssp CCCTTHHHHHHHHHCSCCCCCEEECBCTTTCSSCEEEEEC------------
T ss_pred CCCccHHHHHHHHhCCCCcEEEEEEeecCCCeeeEEEEEecCchhHHHHHHH
Confidence 8888 9999999999865566752 1556766666666554333
No 6
>d2byoa1 b.125.1.3 (A:20-207) Putative lipoprotein LppX {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.16 E-value=41 Score=26.50 Aligned_cols=75 Identities=15% Similarity=0.206 Sum_probs=47.1
Q ss_pred EEEeeCCceeeeccCCceeeeecCCCCccccCCCCchhhhhhcCCCccc-cccc---eeeeeeeeeeeecCceeeEEEee
Q 022693 44 VELALGDSKVHAGCNGKLVWRHTPWLGAHAAKGPVRPLRRALQGLDPRT-TASM---FINARCIGEKKINGEDCFILKLC 119 (293)
Q Consensus 44 ~ELvVgG~KV~AGsdGkvaWRhTpw~g~HaakGp~RPLRR~lQGLDPr~-ta~l---F~~A~cvGEk~i~gedCFiLkl~ 119 (293)
+|+++-|.++-+...++ |..-+- .+.+ -.-+=|||-. .++| +.++..+|++.|||..|.-+.-.
T Consensus 64 ~~~v~~d~~~Y~~~~~~--w~~~~~------~~~~----d~~~~ldP~~gl~~lLa~~~d~~~~G~EtvdG~~t~~~tgt 131 (188)
T d2byoa1 64 VPFRVQGDNISVKLFDD--WSNLGS------ISEL----STSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGT 131 (188)
T ss_dssp EEEEEETTEEEEEETTE--EEEEEE------HHHH----HHHTC-----CCCCCSTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEcCCCc--hhhcCc------cccC----CHhhhcChhHhHHHHhhhcCCceeccceEECCEEEEEEEEE
Confidence 88999888888887653 432110 1111 1112357665 3433 56889999999999999999999
Q ss_pred cCccccccccC
Q 022693 120 ADPSTLKARSE 130 (293)
Q Consensus 120 ~~~~~l~arS~ 130 (293)
.+.+.+..=..
T Consensus 132 v~~~~~~~~~~ 142 (188)
T d2byoa1 132 IPASSVKMLDP 142 (188)
T ss_dssp ECHHHHHHHCT
T ss_pred eCHHHHHhhcc
Confidence 88877765443
No 7
>d1qwta_ b.26.1.3 (A:) Interferon regulatory factor 3 (IRF3), transactivation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.73 E-value=63 Score=26.71 Aligned_cols=42 Identities=24% Similarity=0.522 Sum_probs=33.1
Q ss_pred eeEEEEeeCCCceEEEEeeCCceeeeccCCceeeeecCCCCccccCCCCchh
Q 022693 30 GGFVLWQMNPDMWYVELALGDSKVHAGCNGKLVWRHTPWLGAHAAKGPVRPL 81 (293)
Q Consensus 30 GgFVlWQ~~Pd~W~~ELvVgG~KV~AGsdGkvaWRhTpw~g~HaakGp~RPL 81 (293)
.|.+||...++.|-.-| |-+||-|...--++++...+||+.|
T Consensus 82 rGL~L~~~~~gIyA~Rl----------cq~kVfW~~~~~~~~~~~~~~p~kL 123 (239)
T d1qwta_ 82 GGLALWRAGQWLWAQRL----------GHCHTYWAVSEELLPNSGHGPDGEV 123 (239)
T ss_dssp TCEEEEEETTEEEEEEC----------SSSCEEEEEECSSCCCCTTCCSEEC
T ss_pred cceEEEEcCCcEEEEEe----------cCccEEEeCCcCCCCCCCCCCcccc
Confidence 58889988888887766 6779999887777777777888754
No 8
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=13.37 E-value=29 Score=24.79 Aligned_cols=22 Identities=23% Similarity=0.208 Sum_probs=18.4
Q ss_pred CCch--hhhhhcCCCccccccceee
Q 022693 77 PVRP--LRRALQGLDPRTTASMFIN 99 (293)
Q Consensus 77 p~RP--LRR~lQGLDPr~ta~lF~~ 99 (293)
|.|| |++|++-|.|+ --+.|.=
T Consensus 11 PErpGaf~~F~~~lg~~-nITeF~Y 34 (88)
T d1tdja2 11 PEEKGSFLKFCQLLGGR-SVTEFNY 34 (88)
T ss_dssp CBSSSCSHHHHHTTSSS-EEEEEEE
T ss_pred CCCccHHHHHHHhcCcC-ceEEEEE
Confidence 7888 99999999998 5667763
No 9
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}
Probab=12.26 E-value=1.3e+02 Score=20.88 Aligned_cols=36 Identities=14% Similarity=0.282 Sum_probs=25.6
Q ss_pred eeEEEEeeCCCce----EEEEeeCCceeeeccCCceeeee
Q 022693 30 GGFVLWQMNPDMW----YVELALGDSKVHAGCNGKLVWRH 65 (293)
Q Consensus 30 GgFVlWQ~~Pd~W----~~ELvVgG~KV~AGsdGkvaWRh 65 (293)
++.++|+-+-+-. +++|--.|.-|.-..+|++.|.-
T Consensus 36 ~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS 75 (108)
T d1jpca_ 36 VDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWAS 75 (108)
T ss_dssp TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEEC
T ss_pred CCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEc
Confidence 4457787665443 46666678888888899999973
No 10
>d1sdwa1 b.121.1.2 (A:45-198) Peptidylglycine alpha-hydroxylating monooxygenase, PHM {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=11.78 E-value=39 Score=25.66 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=16.3
Q ss_pred ceeeEEEeecCc--cccccccCCCceEEEeee
Q 022693 111 EDCFILKLCADP--STLKARSEGPAEIIRHVL 140 (293)
Q Consensus 111 edCFiLkl~~~~--~~l~arS~~~~EiirH~~ 140 (293)
=-||++++.-+. -...-.=-++.+++||++
T Consensus 35 Y~C~~~~~p~~~~~~i~~~ep~~n~~~VHH~l 66 (154)
T d1sdwa1 35 YFCMSMRLPVDEEAFVIDFKPRASMDTVHHML 66 (154)
T ss_dssp EEEEEEECSCSSCEEEEEEEEECCTTTEEEEE
T ss_pred EEEEEecCCCCCceeEEEEEEcCCCCeeEEEE
Confidence 348888875332 111111114678888884
Done!