Query 022695
Match_columns 293
No_of_seqs 141 out of 204
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 09:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022695.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022695hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iuwa1 b.82.2.10 (A:70-279) A 78.5 2.6 0.00019 33.6 7.1 30 150-179 18-48 (210)
2 d2a1xa1 b.82.2.9 (A:43-338) Ph 73.0 13 0.00091 30.1 10.1 44 118-176 4-48 (296)
3 d2fcta1 b.82.2.9 (A:3-310) Syr 58.8 20 0.0014 29.2 8.6 21 154-174 20-40 (308)
4 d1jvaa3 d.95.2.2 (A:582-698) V 57.0 2.6 0.00019 31.8 2.3 26 61-86 2-27 (117)
5 d2fdia1 b.82.2.10 (A:15-214) A 53.4 19 0.0014 29.0 7.5 26 150-175 2-27 (200)
6 d2oo3a1 c.66.1.59 (A:9-279) Un 19.6 1.5E+02 0.011 25.1 7.6 124 83-212 119-249 (271)
7 d1dq3a4 d.95.2.2 (A:227-335) P 19.5 23 0.0017 25.7 2.0 24 64-87 1-24 (109)
8 d1otja_ b.82.2.5 (A:) Taurine/ 19.1 43 0.0031 26.8 3.8 36 244-279 90-131 (281)
9 d1ds1a_ b.82.2.2 (A:) Clavamin 16.9 30 0.0022 29.1 2.3 33 246-278 137-176 (323)
10 d1oiha_ b.82.2.5 (A:) Putative 13.2 78 0.0057 25.4 4.0 37 244-280 88-130 (288)
No 1
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.48 E-value=2.6 Score=33.62 Aligned_cols=30 Identities=7% Similarity=0.296 Sum_probs=24.3
Q ss_pred CCceeEee-cCCHHHHHHHHHHHHhhhhhcc
Q 022695 150 IPGIYTFE-MLQPRFCEMLLSEVENFERWVH 179 (293)
Q Consensus 150 ~PdVY~FP-~ft~~FC~~LieE~E~f~~Ws~ 179 (293)
++||+-+| +|+++..+.|++++.+--.|..
T Consensus 18 ~~~l~y~p~fLs~~e~~~Ll~~L~~e~~w~~ 48 (210)
T d2iuwa1 18 VSRVCLYPGFVDVKEADWILEQLCQDVPWKQ 48 (210)
T ss_dssp CEEEEEETTSSCHHHHHHHHHHHHHHSCCBC
T ss_pred cceEEEECCcCCHHHHHHHHHHHHhhCCccc
Confidence 46888887 7799999999999987656643
No 2
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.97 E-value=13 Score=30.07 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=30.1
Q ss_pred cccCCCCCCChhHHHHHhhhcHHhhhhhccccCCceeEee-cCCHHHHHHHHHHHHhhhh
Q 022695 118 FTMHAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFE-MLQPRFCEMLLSEVENFER 176 (293)
Q Consensus 118 y~l~pe~yl~p~f~~ai~~~tee~~~~~~~ep~PdVY~FP-~ft~~FC~~LieE~E~f~~ 176 (293)
||++ ..-|.++=.+..+.+ |...++ +|+++.|++|..+++.+-+
T Consensus 4 ~~~~-~~~Lt~eq~~~f~~~--------------Gyvvi~~~l~~~~~~~l~~~~~~~~~ 48 (296)
T d2a1xa1 4 YTLD-NNVLTLEQRKFYEEN--------------GFLVIKNLVPDADIQRFRNEFEKICR 48 (296)
T ss_dssp SCCC-C--CCSTHHHHHHHH--------------SEEEETTCSCHHHHHHHHHHHHHHHT
T ss_pred eccC-CCCCCHHHHHHHHHC--------------CEEEccCcCCHHHHHHHHHHHHHHHh
Confidence 4554 355666666666654 666665 8999999999999987654
No 3
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]}
Probab=58.78 E-value=20 Score=29.23 Aligned_cols=21 Identities=10% Similarity=0.009 Sum_probs=16.4
Q ss_pred eEeecCCHHHHHHHHHHHHhh
Q 022695 154 YTFEMLQPRFCEMLLSEVENF 174 (293)
Q Consensus 154 Y~FP~ft~~FC~~LieE~E~f 174 (293)
.--.+|+++.++++..+++..
T Consensus 20 ~i~~~~s~~ei~~i~~~~~~~ 40 (308)
T d2fcta1 20 GPFDAYSPEEMKETWKRTRLR 40 (308)
T ss_dssp EEEESSCHHHHHHHHHHHHHH
T ss_pred ECcCccCHHHHHHHHHHHHHH
Confidence 346789999999998887643
No 4
>d1jvaa3 d.95.2.2 (A:582-698) VMA1-derived endonuclease (VDE) PI-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.04 E-value=2.6 Score=31.75 Aligned_cols=26 Identities=4% Similarity=0.190 Sum_probs=23.3
Q ss_pred hhhCCccccCCCHHHHHHHHHHHHHH
Q 022695 61 ERYLPPTMLSMSRDVKFQYMRDILMK 86 (293)
Q Consensus 61 e~~lp~~~~~~~r~~k~~~~~~il~~ 86 (293)
|++.|..++.++++++..|++-++.-
T Consensus 2 ~K~IP~~i~~~~~~~r~afL~Gl~d~ 27 (117)
T d1jvaa3 2 VKNIPSFLSTDNIGTRETFLAGLIDS 27 (117)
T ss_dssp EECCCGGGGGSCHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHcCCHHHHHHHHHHHHhC
Confidence 68999999999999999999987653
No 5
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}
Probab=53.37 E-value=19 Score=28.97 Aligned_cols=26 Identities=12% Similarity=0.245 Sum_probs=21.4
Q ss_pred CCceeEeecCCHHHHHHHHHHHHhhh
Q 022695 150 IPGIYTFEMLQPRFCEMLLSEVENFE 175 (293)
Q Consensus 150 ~PdVY~FP~ft~~FC~~LieE~E~f~ 175 (293)
+||++.++=|.....++|+++++.--
T Consensus 2 apG~v~l~~f~~~~~~~ll~~~~~~~ 27 (200)
T d2fdia1 2 AAGAVILRRFAFNAAEQLIRDINDVA 27 (200)
T ss_dssp CTTEEEETTTTTTTHHHHHHHHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHHHHHH
Confidence 58999999887677889999988743
No 6
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]}
Probab=19.64 E-value=1.5e+02 Score=25.08 Aligned_cols=124 Identities=10% Similarity=0.172 Sum_probs=69.3
Q ss_pred HHHHhCccchhhhhhhhHHHhhhhhhcCCCCCccccccCCCCCC-ChhHHHHHhhhcHHhhhhhccccCCcee--EeecC
Q 022695 83 ILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTMHAPSVL-VPAFVKAVRDNTEASFRSIMAEPIPGIY--TFEML 159 (293)
Q Consensus 83 il~~~~~~~eR~r~~~~~e~~~~I~~~Y~plhpdLy~l~pe~yl-~p~f~~ai~~~tee~~~~~~~ep~PdVY--~FP~f 159 (293)
.|.+......|.++.+..-|..++.-.=.+-..-|.-||| .|= ..+|.++++. .+++ +..=..||| |+||.
T Consensus 119 ~L~~~~~~~~~~~v~~~DG~~~l~allPP~~rRgLVLIDP-pYE~k~ey~~v~~~-l~~a----~kr~~~g~~~iWYPi~ 192 (271)
T d2oo3a1 119 FLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP-SYERKEEYKEIPYA-IKNA----YSKFSTGLYCVWYPVV 192 (271)
T ss_dssp HHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECC-CCCSTTHHHHHHHH-HHHH----HHHCTTSEEEEEEEES
T ss_pred HHHHHhccCCCceEEcCchHHHHHhhCCCCCCceEEEecC-CcCCHHHHHHHHHH-HHHH----HHhCCCceEEEEeecc
Confidence 3444444445556666777766554322233445666776 232 3467666553 2222 222234665 89999
Q ss_pred CHHHHHHHHHHHHhhhh--hcccCCCCccCCCCCCCcccc-ccc-cChHHHHHHHHH
Q 022695 160 QPRFCEMLLSEVENFER--WVHDTRFRIMRPNTMNKFGAV-LDD-FGLETMLDKLMN 212 (293)
Q Consensus 160 t~~FC~~LieE~E~f~~--Ws~gs~~p~~RPn~mN~YGvV-L~~-iG~e~~~~~ll~ 212 (293)
+.+..+.|++.+...+- |..+-.+.......|++-|.+ +|- .+|+..+..+|.
T Consensus 193 ~~~~~~~~~~~l~~~~~k~l~~El~~~~~~~~gm~GSGm~iiNPPw~l~~~l~~~L~ 249 (271)
T d2oo3a1 193 NKAWTEQFLRKMREISSKSVRIELHLNPLINEGMTGCGLWIINPPYTFPSEIKLVLE 249 (271)
T ss_dssp SHHHHHHHHHHHHHHCSSEEEEEEECCCSSCCSCCEEEEEEESCCTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhcCccceeEEEeeCCCCCCCcceeEEEEECCCccHHHHHHHHHH
Confidence 99999999999987542 211111111112258888865 564 577776666554
No 7
>d1dq3a4 d.95.2.2 (A:227-335) PI-Pfui intein {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=19.53 E-value=23 Score=25.70 Aligned_cols=24 Identities=13% Similarity=0.477 Sum_probs=21.4
Q ss_pred CCccccCCCHHHHHHHHHHHHHHh
Q 022695 64 LPPTMLSMSRDVKFQYMRDILMKY 87 (293)
Q Consensus 64 lp~~~~~~~r~~k~~~~~~il~~~ 87 (293)
+|+.++.+|.+.+..|++-+..--
T Consensus 1 IP~~i~~~~~~~~~~fL~glfd~D 24 (109)
T d1dq3a4 1 IPPQILKEGKNAVLSFIAGLFDAE 24 (109)
T ss_dssp SCHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHhCCHHHHHHHHHHHHhCC
Confidence 599999999999999999988753
No 8
>d1otja_ b.82.2.5 (A:) Taurine/alpha-ketoglutarate dioxygenase TauD {Escherichia coli [TaxId: 562]}
Probab=19.11 E-value=43 Score=26.75 Aligned_cols=36 Identities=11% Similarity=0.126 Sum_probs=25.9
Q ss_pred CCCCCCcccccCC------ceeeEeecCCCccCCceEeceec
Q 022695 244 DRDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGVR 279 (293)
Q Consensus 244 ~~d~~L~~H~D~S------evTlNV~LgkdFeGGgl~F~g~~ 279 (293)
.......+|+|.| .+|+=-|+...-+||++.|+...
T Consensus 90 ~~~~~~~wH~D~s~~~~P~~~~~l~~~~~p~~GG~T~f~d~~ 131 (281)
T d1otja_ 90 NPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGI 131 (281)
T ss_dssp BCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEEHH
T ss_pred ccccccccccccccccCcceeeEEEEEeeccCCCcceecchH
Confidence 3455667999987 45666666556789999998754
No 9
>d1ds1a_ b.82.2.2 (A:) Clavaminate synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=16.86 E-value=30 Score=29.13 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=26.2
Q ss_pred CCCCcccccCC------ceeeEeecCCCccCCc-eEecee
Q 022695 246 DVELGFHVDDS------EVTLNVCLGREFSGGE-LFFRGV 278 (293)
Q Consensus 246 d~~L~~H~D~S------evTlNV~LgkdFeGGg-l~F~g~ 278 (293)
...|.+|+|.| .+.+=.||-.+=+||+ +.+.+.
T Consensus 137 ~~~L~~HtD~ay~~~~Pd~v~L~Clr~~~~GG~st~v~~~ 176 (323)
T d1ds1a_ 137 ETLLEFHTEMAYHRLQPNYVMLACSRADHERTAATLVASV 176 (323)
T ss_dssp SSCEEEECTTTTBTTCCSEEEEEEEECCTTCCCCEEEEEH
T ss_pred CccccccccCCCCCCCCceeEEEEeeeCCCCCcceechhH
Confidence 45788999998 8999899977778887 556553
No 10
>d1oiha_ b.82.2.5 (A:) Putative alkylsulfatase AtsK {Pseudomonas putida [TaxId: 303]}
Probab=13.22 E-value=78 Score=25.42 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=24.6
Q ss_pred CCCCCCcccccCCc------eeeEeecCCCccCCceEeceecc
Q 022695 244 DRDVELGFHVDDSE------VTLNVCLGREFSGGELFFRGVRC 280 (293)
Q Consensus 244 ~~d~~L~~H~D~Se------vTlNV~LgkdFeGGgl~F~g~~c 280 (293)
..+..+.+|+|.|- +|+=-|+--.=.||++.|+....
T Consensus 88 ~~~~~~~WHtD~s~~~~pp~~t~L~~~~~p~~GG~T~f~d~~~ 130 (288)
T d1oiha_ 88 QGQRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAA 130 (288)
T ss_dssp ---CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEEHHH
T ss_pred ccccccccccccccccccccceeEEEEeccCccCccccccchh
Confidence 34667789999873 45555664445899999987643
Done!