BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022697
(293 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255583588|ref|XP_002532550.1| conserved hypothetical protein [Ricinus communis]
gi|223527739|gb|EEF29844.1| conserved hypothetical protein [Ricinus communis]
Length = 434
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/277 (69%), Positives = 222/277 (80%), Gaps = 4/277 (1%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASN--QEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHLDD V Q+TE SKK C Q +P EELSDCKTLSDVL
Sbjct: 157 RLALKAFTDQKRRFFPHLDDGVDGQNTESVSKKQCSLQVVPPVTLLVEELSDCKTLSDVL 216
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
RLEKE+PN+KI T+ERLDWLKRASSLP+ +E+P+E KEH FH+ +KLR G Q+ V+
Sbjct: 217 TRLEKEIPNVKISTFERLDWLKRASSLPAPVSENPIETSKEHTFHTLNKLRTGSQSAVSV 276
Query: 137 --DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHIT 194
DKV+VIELL PS+FRA+VSLHP G+I+PDAVAFFSPDEGG+YIHAR SV+HVFR IT
Sbjct: 277 PTDKVAVIELLSPSVFRALVSLHPAGSIDPDAVAFFSPDEGGSYIHARSFSVHHVFRQIT 336
Query: 195 EHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRP 254
EHA ALQ FLGI+ E +L+ LLHWICSYQTLFSKVCSKCGRLLAMD++ +LLLPPV RP
Sbjct: 337 EHAAMALQHFLGIKAEIALFTLLHWICSYQTLFSKVCSKCGRLLAMDRKSSLLLPPVHRP 396
Query: 255 YRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
YRHF P + S Q ISST +Q D AYH GCFSED
Sbjct: 397 YRHFSPLESPSTQPISSTKDQGLDFPGAYHTGCFSED 433
>gi|224140028|ref|XP_002323389.1| predicted protein [Populus trichocarpa]
gi|222868019|gb|EEF05150.1| predicted protein [Populus trichocarpa]
Length = 417
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/273 (66%), Positives = 219/273 (80%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLD+ QSTEP SKKHC+P+ L + QEELSDCKTLSDVL
Sbjct: 144 RLALKAFTDQKRRFFPHLDEGQDVQSTEPASKKHCIPKDLLLNYQEELSDCKTLSDVLTC 203
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEKE+ NLK+ TYERLDW KRASSLP+SA+E+PL+ K+H FHS SKLR Q+ A DK
Sbjct: 204 LEKEMLNLKVLTYERLDWFKRASSLPASASENPLDTSKDHGFHSLSKLRTVSQSAAATDK 263
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
++VIEL FPS+FRAI+SLHP G+I+PDAVAFFSPDEGG+YIHARG SV+HVFR I+EHA
Sbjct: 264 IAVIELFFPSVFRAIISLHPAGSIDPDAVAFFSPDEGGSYIHARGFSVHHVFRKISEHAA 323
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ FLG+ + T+LY ++HWIC YQTLF+KVCSKCG+LLAMD++ LLLPPV RPY HF
Sbjct: 324 MALQHFLGVSSRTALYSIVHWICCYQTLFTKVCSKCGKLLAMDRKSMLLLPPVYRPYLHF 383
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
+S Q SS + + + A+HIGCF+E+
Sbjct: 384 STLQIASTQTNSSAKDHGLENLGAFHIGCFTEE 416
>gi|225439176|ref|XP_002274655.1| PREDICTED: uncharacterized protein LOC100258667 [Vitis vinifera]
gi|296085885|emb|CBI31209.3| unnamed protein product [Vitis vinifera]
Length = 419
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/276 (67%), Positives = 222/276 (80%), Gaps = 2/276 (0%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPES--KKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHLDD ++ QS+ ES KKHC Q + QEELSD +TLSDVL
Sbjct: 144 RLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHCGSQISTVTQQEELSDYRTLSDVL 203
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
M +EK++PN+KIFTY+RLDWLKRAS+LP SA E ++ KEH+FH S+K R GL VAA
Sbjct: 204 MHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMDSSKEHDFHISNKPRLGLLGAVAA 263
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEH 196
DKV+VIELLFPSIFRAI+SLHP G+I+PDAVAFFSPDEGG+Y+HARG SVYHVF+H+TEH
Sbjct: 264 DKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDEGGSYVHARGFSVYHVFKHVTEH 323
Query: 197 AGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A ALQ FLG TET+LY LLHWI SYQTLF++ CSKC RLL+MD++ LLLPPV PYR
Sbjct: 324 AAMALQHFLGTNTETALYSLLHWIFSYQTLFTEPCSKCKRLLSMDRQSDLLLPPVYHPYR 383
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
F +SS Q ISST Q+ D +AYH+GCFSE+A
Sbjct: 384 SFCAIKSSSPQSISSTKNQTLDASHAYHVGCFSEEA 419
>gi|356573024|ref|XP_003554665.1| PREDICTED: uncharacterized protein LOC100782776 [Glycine max]
Length = 418
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/273 (63%), Positives = 210/273 (76%), Gaps = 9/273 (3%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLDD + +++E SKK C + + +E +S +TL DVL
Sbjct: 154 RLALKAFTDQKRRFFPHLDDGL--ETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKS 211
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK+VPNLKI T+ERLDWLKRAS+L SS NE+ LE HN+H S+KLR G TV A+K
Sbjct: 212 LEKDVPNLKILTFERLDWLKRASTLTSSTNENSLE----HNYHGSNKLRLGSVGTVPAEK 267
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V+VIELLFP +FRA++SLHP G+++PDAVAFF+PDE G+Y+HARG SV+HVFRHITE+A
Sbjct: 268 VAVIELLFPCVFRAVISLHPAGSMDPDAVAFFAPDESGSYVHARGFSVHHVFRHITEYAA 327
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
TALQ+FLG ++ET LYFLLHWICSYQTLFS+ CSKC RLLAMDK+ LLLPPV RPY F
Sbjct: 328 TALQYFLGNQSETCLYFLLHWICSYQTLFSRPCSKCSRLLAMDKQSTLLLPPVHRPYWQF 387
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
S L S+ +Q+SD AYHI C SE+
Sbjct: 388 ---SFSKILLNISSKDQNSDTTQAYHIDCLSEE 417
>gi|356505433|ref|XP_003521495.1| PREDICTED: uncharacterized protein LOC100796886 [Glycine max]
Length = 425
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/273 (62%), Positives = 208/273 (76%), Gaps = 9/273 (3%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLDD + +++E SKK C + + +E +S +TL DVL
Sbjct: 161 RLALKAFTDQKRRFFPHLDDGL--ETSESASKKCCGSEEIAVDPKEGISFLRTLPDVLKS 218
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK+VPNLKI T+ERLDWLKRAS+L S NE+ LE HN+H S+KLR G TV A+K
Sbjct: 219 LEKDVPNLKILTFERLDWLKRASTLTLSTNENYLE----HNYHGSNKLRLGSVGTVPAEK 274
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V+VIELLFP +FRA++SLHP G+++PD VAFF+PDE G+Y+HARG SV+HVFRHITE+A
Sbjct: 275 VAVIELLFPCVFRAVISLHPAGSMDPDVVAFFAPDESGSYVHARGFSVHHVFRHITEYAA 334
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
TALQ+FLG ++ET LYFLLHWICSYQTLFSK CSKC RLLAMDK+ LLLPPV RPY F
Sbjct: 335 TALQYFLGNQSETCLYFLLHWICSYQTLFSKPCSKCSRLLAMDKQSTLLLPPVHRPYWQF 394
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
S L S+ +Q+SD AYHI C SE+
Sbjct: 395 ---SFSKILLNISSKDQNSDTTQAYHIDCLSEE 424
>gi|449437464|ref|XP_004136512.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Cucumis sativus]
gi|449515406|ref|XP_004164740.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Cucumis sativus]
Length = 421
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/273 (58%), Positives = 203/273 (74%), Gaps = 2/273 (0%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHL+D + + EP KK C + Q EL D ++LSD+L
Sbjct: 150 RLALKAFTDQKRRFFPHLEDE-NASNNEPALKKPCFSHGVTDVKQNELIDSRSLSDILSC 208
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
+EKEVP LKIFTYERLDWLK+AS+LPS ANE+ + LKEH++HS ++ PG ADK
Sbjct: 209 MEKEVPELKIFTYERLDWLKQASALPSQANENSIGALKEHSYHSP-RMSPGALGATPADK 267
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
VIEL+ PS+FRA+VSLHPVG++EPDA+AFFSPDE G+++HARG S YH+FRH+TEHA
Sbjct: 268 AGVIELIIPSVFRAVVSLHPVGSVEPDALAFFSPDERGSHVHARGFSNYHLFRHVTEHAA 327
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
T LQ+FLG + + +LY LL WICSYQ LFSK CSKCGR L+++K+ LLLPP RPY+ F
Sbjct: 328 TVLQYFLGNQPKAALYPLLLWICSYQNLFSKACSKCGRRLSVNKQSDLLLPPAVRPYKQF 387
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
+ SS I+S +Q D V A+HI CFSE+
Sbjct: 388 CASKNSSVVPITSLKDQKLDSVQAFHIDCFSEE 420
>gi|297829452|ref|XP_002882608.1| hypothetical protein ARALYDRAFT_897068 [Arabidopsis lyrata subsp.
lyrata]
gi|297328448|gb|EFH58867.1| hypothetical protein ARALYDRAFT_897068 [Arabidopsis lyrata subsp.
lyrata]
Length = 402
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/273 (58%), Positives = 198/273 (72%), Gaps = 18/273 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPH+DD + EP SKKH L + +EE D KTL D+ R
Sbjct: 147 RLALKAFTDQKRRFFPHIDDGL---KMEPSSKKHRASHFLLENGREEPVDYKTLPDIQSR 203
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK VPN+K+ TY RL+WLKRA+SLP S ++ P E K F SSSKLR GLQ V DK
Sbjct: 204 LEKLVPNVKVSTYGRLNWLKRANSLPGSGSDDPTEGSKP-IFQSSSKLRSGLQTEVV-DK 261
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
++VIEL FPS+FRAIVSL+P G+++PDAVAFFSPDEGG+Y+HARG SVYHV++H+TEHA
Sbjct: 262 IAVIELSFPSLFRAIVSLNPAGSVDPDAVAFFSPDEGGSYLHARGFSVYHVYKHMTEHAA 321
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
TALQ+FLG T T+LY LL WICS+++LFSK C+KCGRLLAMDK+ AL+LPP+ R Y+
Sbjct: 322 TALQYFLGFGTGTALYSLLLWICSFESLFSKPCTKCGRLLAMDKKSALILPPLHRAYQ-- 379
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
+L + N DV AYH C +D
Sbjct: 380 --------ELPLALN---LDVCEAYHSSCSQDD 401
>gi|18398414|ref|NP_566345.1| uncharacterized protein [Arabidopsis thaliana]
gi|75158718|sp|Q8RWM3.1|MED27_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Mediator of RNA polymerase II
transcription subunit 3
gi|20260202|gb|AAM12999.1| unknown protein [Arabidopsis thaliana]
gi|56382015|gb|AAV85726.1| At3g09180 [Arabidopsis thaliana]
gi|332641213|gb|AEE74734.1| uncharacterized protein [Arabidopsis thaliana]
Length = 402
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 195/273 (71%), Gaps = 18/273 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPH+DD + EP SKKH L + +EE D KTL D+ R
Sbjct: 147 RLALKAFTDQKRRFFPHIDDGL---KMEPSSKKHRASHLLLENGREEPVDYKTLPDIQSR 203
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK VP++K+ TY RL+WLKRA+SLP S ++ P E K F SSSKLR GLQ V DK
Sbjct: 204 LEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKP-IFQSSSKLRSGLQTEVV-DK 261
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
++VIEL FPS+FRAIVSL P G+++PDAVAFFSPDEGG+Y+HARG SVYHV++HITEHA
Sbjct: 262 IAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEGGSYLHARGFSVYHVYKHITEHAA 321
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
TALQ+FLG T T+LY LL WICS++++FSK C+KCGRLLAMDK+ AL+LPP+ R Y+
Sbjct: 322 TALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSALILPPLHRAYQEL 381
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
+ + DV AYH C +D
Sbjct: 382 PLAL-------------NLDVCEAYHSSCSQDD 401
>gi|21537085|gb|AAM61426.1| unknown [Arabidopsis thaliana]
Length = 402
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/273 (57%), Positives = 194/273 (71%), Gaps = 18/273 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPH+DD + EP SKKH L + +EE D KTL D+ R
Sbjct: 147 RLALKAFTDQKRRFFPHIDDGL---KMEPSSKKHRASHLLLENGREEPVDYKTLPDIQSR 203
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK VP++K+ TY RL+WLKRA+SLP S ++ P E K F SSSKLR GLQ V DK
Sbjct: 204 LEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKP-IFQSSSKLRSGLQTEVV-DK 261
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
++VIEL FPS+FRAIVSL P +++PDAVAFFSPDEGG+Y+HARG SVYHV++HITEHA
Sbjct: 262 IAVIELSFPSLFRAIVSLSPAASVDPDAVAFFSPDEGGSYLHARGFSVYHVYKHITEHAA 321
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
TALQ+FLG T T+LY LL WICS++++FSK C+KCGRLLAMDK+ AL+LPP+ R Y+
Sbjct: 322 TALQYFLGFGTGTALYSLLLWICSFESVFSKPCTKCGRLLAMDKKSALILPPLHRAYQEL 381
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSED 291
+ + DV AYH C +D
Sbjct: 382 PLAL-------------NLDVCEAYHSSCSQDD 401
>gi|218187929|gb|EEC70356.1| hypothetical protein OsI_01279 [Oryza sativa Indica Group]
gi|222618151|gb|EEE54283.1| hypothetical protein OsJ_01196 [Oryza sativa Japonica Group]
Length = 419
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 190/274 (69%), Gaps = 18/274 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLDD + + E P+ LPASN E + +TLS++L
Sbjct: 164 RLALKAFTDQKRRFFPHLDDEGFNHLHDGEPGLAKKPR-LPASNGE--LEERTLSEILKN 220
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE EVPN+KIFTY RLDW KRA+SL + N+ ++ KE N + SK G +T D+
Sbjct: 221 LENEVPNMKIFTYRRLDWSKRAASLATLMNDDFVDPSKELNLQNMSK--SGSGDTTPIDQ 278
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V++IELL PSIFRAIVSLHP G+ +PDAVAFFSP EGG+Y+HARG SV+HVF+H++EHA
Sbjct: 279 VAIIELLAPSIFRAIVSLHPAGSTDPDAVAFFSPTEGGSYLHARGLSVHHVFKHVSEHAD 338
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ+F+ + SL LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY H
Sbjct: 339 KALQYFVSVEPTKSLSLLLRWIASYQTLFTKVCSKCGRLLLMDKSLALLLPPVQRPYHH- 397
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ SD +AYHIGC S DA
Sbjct: 398 ------------QTSSVGSDPQDAYHIGCSSYDA 419
>gi|312282481|dbj|BAJ34106.1| unnamed protein product [Thellungiella halophila]
Length = 411
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/276 (57%), Positives = 192/276 (69%), Gaps = 15/276 (5%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPH+DD EP SKKH + +E+ D KTL D+
Sbjct: 149 RLALKAFTDQKRRFFPHIDD---GSKMEPSSKKHHASHSPFEHGREQPVDNKTLPDIQSS 205
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE VPN+K+ TY RL WLKRA+SLP S ++ P E K F SSSKLR GLQ VA DK
Sbjct: 206 LENLVPNVKVSTYGRLSWLKRANSLPVSGSDDPTEASKPF-FQSSSKLRSGLQAEVA-DK 263
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V+VIEL PS+FRAIVSL+P G+++PDAVAFFSPDEGG+Y+HARG SVYHV++HITEHA
Sbjct: 264 VAVIELSVPSVFRAIVSLNPPGSVDPDAVAFFSPDEGGSYLHARGFSVYHVYKHITEHAA 323
Query: 199 TALQF--FLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
TALQ+ G T LY LL WICS+++LFSK CSKCGRLLAMD++ AL+LPP+ RPY+
Sbjct: 324 TALQYFLGFGTGGGTPLYSLLLWICSFESLFSKPCSKCGRLLAMDQKSALILPPLHRPYQ 383
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
P V T E + D AYH GC +D+
Sbjct: 384 E-LPHVV-------KTGEANLDACEAYHAGCSPDDS 411
>gi|357127912|ref|XP_003565621.1| PREDICTED: uncharacterized protein LOC100846695 [Brachypodium
distachyon]
Length = 440
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/274 (57%), Positives = 186/274 (67%), Gaps = 18/274 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHL+D V + ES P+ L A N E + KTLS+VL
Sbjct: 185 RLALKAFTDQKRRFFPHLEDEVLSNLHDGESVIAKRPR-LTAGNGE--PEEKTLSEVLKN 241
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE EVPNLKIFTY RLDW KRASSL ++ ++ KE N + K R G T AD+
Sbjct: 242 LENEVPNLKIFTYRRLDWSKRASSLVCLMDDDFVDPSKELNLQNMRKSRSG-SATTPADQ 300
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V+VIELL PSIFRA+VSLHP G+++P AVAFFSP EGG+Y+HARG SV+HVF+H+TEHA
Sbjct: 301 VAVIELLVPSIFRAVVSLHPAGSVDPAAVAFFSPTEGGDYLHARGLSVHHVFKHVTEHAE 360
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ+F+ + + +L LL WI YQTLF+KVCSKC RLL MDK LALLLPPV RPY
Sbjct: 361 KALQYFVSVEPDKALSQLLRWIADYQTLFTKVCSKCRRLLLMDKSLALLLPPVHRPYHQ- 419
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ SSD AYHIGC S DA
Sbjct: 420 -------------TSNGSSDQQEAYHIGCSSYDA 440
>gi|326502524|dbj|BAJ95325.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 411
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 185/274 (67%), Gaps = 18/274 (6%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHL+D V + + ES Q +PA N E + KTLS++L
Sbjct: 156 RLALKAFTDQKRRFFPHLEDEVLNHLHDGESGI-AKRQRMPAGNGE--LEEKTLSEILKN 212
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE EVPN+K+ Y RLDW KRASSL S ++ ++ KE N + K RPG T D+
Sbjct: 213 LENEVPNMKVSMYRRLDWSKRASSLASLMDDDFVDPSKELNLQNMGKSRPG-SVTTPIDQ 271
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V+VIELL PSIFR +VSLHP G+++PDAVAFFSP EGG+Y+HARG SV+HVF+H+TEHA
Sbjct: 272 VAVIELLVPSIFRVVVSLHPAGSVDPDAVAFFSPTEGGSYLHARGLSVHHVFKHVTEHAD 331
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ+F+ + +L LL WI YQTLF+K+CSKC RLL MDK LALLLPPV RPY
Sbjct: 332 KALQYFISVEPSKALSLLLRWIADYQTLFTKLCSKCRRLLLMDKSLALLLPPVHRPYHQ- 390
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
ISS SD AYHIGC S DA
Sbjct: 391 ----------ISSIG---SDHQEAYHIGCSSYDA 411
>gi|242052523|ref|XP_002455407.1| hypothetical protein SORBIDRAFT_03g010270 [Sorghum bicolor]
gi|241927382|gb|EES00527.1| hypothetical protein SORBIDRAFT_03g010270 [Sorghum bicolor]
Length = 418
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 184/276 (66%), Gaps = 22/276 (7%)
Query: 19 RLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHL+D V H EP K P+ + ++ E K+LS++L
Sbjct: 163 RLALKAFTDQKRRFFPHLEDEVLSHLHDGEPGVTKK--PKLISSNGDLE---EKSLSEIL 217
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
LE EVPN+KIFTY LDW KRASSL S ++ ++ KE N + K R G T
Sbjct: 218 KNLENEVPNMKIFTYWHLDWSKRASSLASLMDDDFVDPSKELNLQNMGKSRSGALTT-PI 276
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEH 196
D+V+VIELL PSIFRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV+HVF+H+ EH
Sbjct: 277 DQVAVIELLVPSIFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHHVFKHVKEH 336
Query: 197 AGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A ALQ+F+ + +L LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY
Sbjct: 337 ADKALQYFISVEPNKALSLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYH 396
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ D+ AYHIGC S D
Sbjct: 397 Q--------------TSSIGPDLQEAYHIGCSSYDG 418
>gi|212723598|ref|NP_001132203.1| uncharacterized protein LOC100193632 [Zea mays]
gi|195636160|gb|ACG37548.1| hypothetical protein [Zea mays]
gi|414880920|tpg|DAA58051.1| TPA: hypothetical protein ZEAMMB73_885358 [Zea mays]
gi|414880921|tpg|DAA58052.1| TPA: hypothetical protein ZEAMMB73_885358 [Zea mays]
Length = 440
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 182/276 (65%), Gaps = 22/276 (7%)
Query: 19 RLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHL+D V H EP K P+ ++ E K+LSD+L
Sbjct: 185 RLALKAFTDQKRRFFPHLEDEVVSHLHDGEPGGTKK--PKLFTSNGDLE---EKSLSDIL 239
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
LE E N+KIFTY LDW KRASSL S ++ ++ KE N + K R G T +
Sbjct: 240 KNLEHEASNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMGKSRSGAL-TTSI 298
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEH 196
D+V+VIELL PS+FRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV++VF+H+ EH
Sbjct: 299 DQVAVIELLVPSVFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHNVFKHVKEH 358
Query: 197 AGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A ALQ+F+ + +L LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY
Sbjct: 359 ADKALQYFISVEPSKALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYH 418
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ D+ AYHIGC S D
Sbjct: 419 Q--------------TSNIGPDLQEAYHIGCSSYDG 440
>gi|194693748|gb|ACF80958.1| unknown [Zea mays]
Length = 375
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 182/276 (65%), Gaps = 22/276 (7%)
Query: 19 RLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHL+D V H EP K P+ ++ E K+LSD+L
Sbjct: 120 RLALKAFTDQKRRFFPHLEDEVVSHLHDGEPGGTKK--PKLFTSNGDLE---EKSLSDIL 174
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
LE E N+KIFTY LDW KRASSL S ++ ++ KE N + K R G T +
Sbjct: 175 KNLEHEASNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMGKSRSGALTT-SI 233
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEH 196
D+V+VIELL PS+FRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV++VF+H+ EH
Sbjct: 234 DQVAVIELLVPSVFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHNVFKHVKEH 293
Query: 197 AGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A ALQ+F+ + +L LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY
Sbjct: 294 ADKALQYFISVEPSKALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVHRPYH 353
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ D+ AYHIGC S D
Sbjct: 354 Q--------------TSNIGPDLQEAYHIGCSSYDG 375
>gi|224034589|gb|ACN36370.1| unknown [Zea mays]
gi|413949225|gb|AFW81874.1| hypothetical protein ZEAMMB73_545414 [Zea mays]
Length = 419
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/279 (54%), Positives = 182/279 (65%), Gaps = 28/279 (10%)
Query: 19 RLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQ--EELSDCKTLSD 74
RLALKAFTDQK+RFFPHL+D V H +P K L SN EE K+LS+
Sbjct: 164 RLALKAFTDQKRRFFPHLEDEVVSHLHDGQPGDTKKS---KLFTSNGYLEE----KSLSE 216
Query: 75 VLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRP-GLQNT 133
+L LE EVPN+KIFTY LDW KRASSL S ++ ++ KE N + K R L T
Sbjct: 217 ILKNLEHEVPNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMDKSRSDALTTT 276
Query: 134 VAADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHI 193
+ D+V+VIELL PSIFRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV+HVF+H+
Sbjct: 277 I--DQVAVIELLVPSIFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHHVFKHV 334
Query: 194 TEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSR 253
EHA ALQ+F+ +L LL WI SYQTLF+KVCSKC RLL MDK LALLLPPV R
Sbjct: 335 KEHADKALQYFINAEPSKALPLLLRWIASYQTLFTKVCSKCRRLLMMDKSLALLLPPVHR 394
Query: 254 PYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
PY T+ D+ AYHIGC S D
Sbjct: 395 PYHQ--------------TSNVGPDLQEAYHIGCSSYDG 419
>gi|226495853|ref|NP_001142387.1| hypothetical protein precursor [Zea mays]
gi|194708584|gb|ACF88376.1| unknown [Zea mays]
gi|413949226|gb|AFW81875.1| hypothetical protein ZEAMMB73_545414 [Zea mays]
Length = 280
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 181/283 (63%), Gaps = 26/283 (9%)
Query: 14 EREVFRLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQ--EELSDC 69
E RLALKAFTDQK+RFFPHL+D V H +P K L SN EE
Sbjct: 20 EASTSRLALKAFTDQKRRFFPHLEDEVVSHLHDGQPGDTK---KSKLFTSNGYLEE---- 72
Query: 70 KTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPG 129
K+LS++L LE EVPN+KIFTY LDW KRASSL S ++ ++ KE N + K R
Sbjct: 73 KSLSEILKNLEHEVPNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMDKSRSD 132
Query: 130 LQNTVAADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHV 189
T D+V+VIELL PSIFRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV+HV
Sbjct: 133 ALTTTI-DQVAVIELLVPSIFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHHV 191
Query: 190 FRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLP 249
F+H+ EHA ALQ+F+ +L LL WI SYQTLF+KVCSKC RLL MDK LALLLP
Sbjct: 192 FKHVKEHADKALQYFINAEPSKALPLLLRWIASYQTLFTKVCSKCRRLLMMDKSLALLLP 251
Query: 250 PVSRPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
PV RPY T+ D+ AYHIGC S D
Sbjct: 252 PVHRPYHQ--------------TSNVGPDLQEAYHIGCSSYDG 280
>gi|56783836|dbj|BAD81248.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 403
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 171/274 (62%), Gaps = 38/274 (13%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLDD + + E P+ LPASN E + +TLS++L
Sbjct: 168 RLALKAFTDQKRRFFPHLDDEGFNHLHDGEPGLAKKPR-LPASNGE--LEERTLSEILKN 224
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE EVPN+KIFTY RLDW KRA+SL + N+ ++ KE N + SK G +T D+
Sbjct: 225 LENEVPNMKIFTYRRLDWSKRAASLATLMNDDFVDPSKELNLQNMSK--SGSGDTTPIDQ 282
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V++IELL PSIFRAIVSLHP G+ +PDAVAFFSP E EHA
Sbjct: 283 VAIIELLAPSIFRAIVSLHPAGSTDPDAVAFFSPTE--------------------EHAD 322
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ+F+ + SL LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY H
Sbjct: 323 KALQYFVSVEPTKSLSLLLRWIASYQTLFTKVCSKCGRLLLMDKSLALLLPPVQRPYHH- 381
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ SD +AYHIGC S DA
Sbjct: 382 ------------QTSSVGSDPQDAYHIGCSSYDA 403
>gi|297596492|ref|NP_001042658.2| Os01g0263500 [Oryza sativa Japonica Group]
gi|255673086|dbj|BAF04572.2| Os01g0263500 [Oryza sativa Japonica Group]
Length = 311
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 171/274 (62%), Gaps = 38/274 (13%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPHLDD + + E P+ LPASN E + +TLS++L
Sbjct: 76 RLALKAFTDQKRRFFPHLDDEGFNHLHDGEPGLAKKPR-LPASNGE--LEERTLSEILKN 132
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LE EVPN+KIFTY RLDW KRA+SL + N+ ++ KE N + SK G +T D+
Sbjct: 133 LENEVPNMKIFTYRRLDWSKRAASLATLMNDDFVDPSKELNLQNMSK--SGSGDTTPIDQ 190
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAG 198
V++IELL PSIFRAIVSLHP G+ +PDAVAFFSP E EHA
Sbjct: 191 VAIIELLAPSIFRAIVSLHPAGSTDPDAVAFFSPTE--------------------EHAD 230
Query: 199 TALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
ALQ+F+ + SL LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV RPY H
Sbjct: 231 KALQYFVSVEPTKSLSLLLRWIASYQTLFTKVCSKCGRLLLMDKSLALLLPPVQRPYHH- 289
Query: 259 FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
T+ SD +AYHIGC S DA
Sbjct: 290 ------------QTSSVGSDPQDAYHIGCSSYDA 311
>gi|147772405|emb|CAN73983.1| hypothetical protein VITISV_017985 [Vitis vinifera]
Length = 862
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 130/158 (82%), Gaps = 2/158 (1%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPES--KKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHLDD ++ QS+ ES KKHC Q + QEELSD +TLSDVL
Sbjct: 271 RLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHCGSQISTVTQQEELSDYRTLSDVL 330
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
M +EK++PN+KIFTY+RLDWLKRAS+LP SA E ++ KEH+FH S+K R GL VAA
Sbjct: 331 MHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMDSSKEHDFHISNKPRLGLLGAVAA 390
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDE 174
DKV+VIELLFPSIFRAI+SLHP G+I+PDAVAFFSPDE
Sbjct: 391 DKVAVIELLFPSIFRAIISLHPAGSIDPDAVAFFSPDE 428
>gi|5923682|gb|AAD56333.1|AC009326_20 hypothetical protein [Arabidopsis thaliana]
gi|6478914|gb|AAF14019.1|AC011436_3 unknown protein [Arabidopsis thaliana]
Length = 358
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 133/206 (64%), Gaps = 35/206 (16%)
Query: 19 RLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMR 78
RLALKAFTDQK+RFFPH+DD + EP SKKH L + +EE D KTL D+ R
Sbjct: 147 RLALKAFTDQKRRFFPHIDDGL---KMEPSSKKHRASHLLLENGREEPVDYKTLPDIQSR 203
Query: 79 LEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK 138
LEK VP++K+ TY RL+WLKRA+SLP S ++ P E K F SSSKLR GLQ V DK
Sbjct: 204 LEKLVPSVKVSTYGRLNWLKRANSLPGSGSDDPTEASKP-IFQSSSKLRSGLQTEV-VDK 261
Query: 139 VSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDE------------------------ 174
++VIEL FPS+FRAIVSL P G+++PDAVAFFSPDE
Sbjct: 262 IAVIELSFPSLFRAIVSLSPAGSVDPDAVAFFSPDEVTSNLLALKYTDSHVKLFKFSCFS 321
Query: 175 ------GGNYIHARGSSVYHVFRHIT 194
GG+Y+HARG SVYHV++HIT
Sbjct: 322 FIPFLQGGSYLHARGFSVYHVYKHIT 347
>gi|414880918|tpg|DAA58049.1| TPA: hypothetical protein ZEAMMB73_885358 [Zea mays]
Length = 155
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 114/160 (71%), Gaps = 14/160 (8%)
Query: 133 TVAADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRH 192
T + D+V+VIELL PS+FRA+VSLHP G+ +PDAVAFFSP EGG+Y+HARG+SV++VF+H
Sbjct: 10 TTSIDQVAVIELLVPSVFRAVVSLHPAGSTDPDAVAFFSPTEGGSYLHARGTSVHNVFKH 69
Query: 193 ITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVS 252
+ EHA ALQ+F+ + +L LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV
Sbjct: 70 VKEHADKALQYFISVEPSKALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVH 129
Query: 253 RPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
RPY T+ D+ AYHIGC S D
Sbjct: 130 RPYHQ--------------TSNIGPDLQEAYHIGCSSYDG 155
>gi|414880919|tpg|DAA58050.1| TPA: hypothetical protein ZEAMMB73_885358 [Zea mays]
Length = 353
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 104/158 (65%), Gaps = 8/158 (5%)
Query: 19 RLALKAFTDQKKRFFPHLDDRV--HDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVL 76
RLALKAFTDQK+RFFPHL+D V H EP K P+ ++ E K+LSD+L
Sbjct: 185 RLALKAFTDQKRRFFPHLEDEVVSHLHDGEPGGTKK--PKLFTSNGDLE---EKSLSDIL 239
Query: 77 MRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAA 136
LE E N+KIFTY LDW KRASSL S ++ ++ KE N + K R G T +
Sbjct: 240 KNLEHEASNIKIFTYWHLDWSKRASSLASLLDDDFVDPSKELNLQNMGKSRSGAL-TTSI 298
Query: 137 DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDE 174
D+V+VIELL PS+FRA+VSLHP G+ +PDAVAFFSP E
Sbjct: 299 DQVAVIELLVPSVFRAVVSLHPAGSTDPDAVAFFSPTE 336
>gi|388492784|gb|AFK34458.1| unknown [Lotus japonicus]
Length = 117
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 80/112 (71%), Gaps = 5/112 (4%)
Query: 182 RGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
RG SV+HV RHIT++A ALQ+FLG + ETSLY LLHWI SYQTLFS+ CSKC +LLAMD
Sbjct: 10 RGVSVHHVNRHITDYAAIALQYFLGNQPETSLYSLLHWISSYQTLFSRPCSKCSKLLAMD 69
Query: 242 KRLALLLPPVSRPYRHF-FPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
K+ LLLPPV RPY F F + S+ L +Q+SD AYH GC +E+
Sbjct: 70 KQTNLLLPPVHRPYWKFSFSKILSNISL----KDQNSDTTQAYHTGCLTEEV 117
>gi|414880917|tpg|DAA58048.1| TPA: hypothetical protein ZEAMMB73_885358 [Zea mays]
Length = 88
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 60/100 (60%), Gaps = 14/100 (14%)
Query: 193 ITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVS 252
+ EHA ALQ+F+ + +L LL WI SYQTLF+KVCSKCGRLL MDK LALLLPPV
Sbjct: 3 MKEHADKALQYFISVEPSKALPLLLRWIASYQTLFTKVCSKCGRLLMMDKSLALLLPPVH 62
Query: 253 RPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 292
RPY T+ D+ AYHIGC S D
Sbjct: 63 RPYHQ--------------TSNIGPDLQEAYHIGCSSYDG 88
>gi|328876615|gb|EGG24978.1| putative mediator complex subunit 27 [Dictyostelium fasciculatum]
Length = 541
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 165 DAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETS-LYFLLHWICSY 223
D ++FF +E + GSS Y++F+ ++E+A A+ +F S L +L WI S+
Sbjct: 417 DKISFFGINESFDSFW--GSSKYNIFKKLSENAYEAISYFTSNHNNQSILKNILSWIWSF 474
Query: 224 QTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ LF + C C +L +D + LPP R + ++ P
Sbjct: 475 RGLFVEECRGCQCILQLDSSNYMFLPPSFRTFDNYIP 511
>gi|330792849|ref|XP_003284499.1| hypothetical protein DICPUDRAFT_96730 [Dictyostelium purpureum]
gi|325085529|gb|EGC38934.1| hypothetical protein DICPUDRAFT_96730 [Dictyostelium purpureum]
Length = 506
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 165 DAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQ 224
D ++FF E N+ SS Y++F+ I+E++ A+ ++ + L +L WI S++
Sbjct: 384 DRISFFGIKE--NFDSLWASSKYNIFKKISENSFEAISYYSANPNGSILKSVLSWIWSFR 441
Query: 225 TLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
LF + C C +L +D + LPP R + +F P
Sbjct: 442 GLFLEECKGCNDILHLDSTQYMYLPPSFRTFDNFTP 477
>gi|321466321|gb|EFX77317.1| hypothetical protein DAPPUDRAFT_213503 [Daphnia pulex]
Length = 304
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITEHA 197
+V+++ I + IV L + +E V + D E G I G S Y VFR +TE+A
Sbjct: 182 TVLQITLGKIMKGIVVLKRL-MVEWVVVKGATEDLIEDGK-IDMWGESRYKVFRKVTENA 239
Query: 198 GTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A L F+ E ++ L W SYQ+LF+ C KCG L LLPP R R
Sbjct: 240 NAAMLHFYSPAYPELAIRSFLTWFNSYQSLFTSPCKKCGH------HLHNLLPPTWRDLR 293
Query: 257 HFFP 260
P
Sbjct: 294 TLDP 297
>gi|281211932|gb|EFA86094.1| putative mediator complex subunit 27 [Polysphondylium pallidum PN500]
Length = 1117
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 144 LLFPSIFRAIVSL----HPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGT 199
++F +F+ ++S D +AFF E + +S +++FR I+E++
Sbjct: 979 VIFSDVFKCLISFAMSEESSECYRIDRIAFFGIKEK--FDSFWDTSKFNIFRKISENSYE 1036
Query: 200 ALQFFLGIRTETS-LYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
A+ ++ TS L +L+WI S++ LF + C C +L +D + + LPP YR F
Sbjct: 1037 AISYYTSNTGGTSILKNILNWIWSFRGLFVEECKGCQNILQLDSSMFMYLPP---SYRTF 1093
Query: 259 FPTVT 263
T T
Sbjct: 1094 DGTFT 1098
>gi|426197395|gb|EKV47322.1| hypothetical protein AGABI2DRAFT_143038 [Agaricus bisporus var.
bisporus H97]
Length = 822
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 104 PSSANESPLE------LLKEHNFHSSSKLRPGLQNTVAA--DKVSVIELLFPSIFRAIVS 155
P+ AN PL ++EHN +KL+ L+ A D+ ++ + P + +S
Sbjct: 113 PADANAVPLTAHDLLGYIREHNRERGAKLQIWLKTAAEAKSDRPQLLRFMIPDVVIVYIS 172
Query: 156 L---HPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETS 212
+ G + + +A F P E A S Y VF+++++ QF + + +
Sbjct: 173 VSYERTSGAVVIENMAAFGPREKK---AAHEQSEYTVFQNLSQ------QFARVLHSNPN 223
Query: 213 LYF--LLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRH 257
+ F L++W+ ++ +F C+ CGR+L+++ +PPV R ++H
Sbjct: 224 IPFQSLMNWLAVHEGIFKDPCTACGRVLSVEGH----VPPVVRAWKH 266
>gi|66826699|ref|XP_646704.1| hypothetical protein DDB_G0271072 [Dictyostelium discoideum AX4]
gi|74858255|sp|Q55BX7.1|MED27_DICDI RecName: Full=Putative mediator of RNA polymerase II transcription
subunit 27; AltName: Full=Putative mediator complex
subunit 27; AltName: Full=Putative mediator complex
subunit 3; AltName: Full=Putative mediator of RNA
polymerase II transcription subunit 3
gi|60474949|gb|EAL72886.1| hypothetical protein DDB_G0271072 [Dictyostelium discoideum AX4]
Length = 450
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 165 DAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRTETS-LYFLLHWICSY 223
D ++FF E N+ SS Y++F+ I+E++ A+ ++ S L +L WI S+
Sbjct: 322 DRISFFGVKE--NFDSLWASSKYNIFKKISENSFEAISYYSANPNGGSILKCILSWIWSF 379
Query: 224 QTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ LF + C C +L +D + LPP R + ++ P
Sbjct: 380 RGLFLEECKGCQDILHLDSPQYMYLPPSFRTFDNYTP 416
>gi|390346050|ref|XP_003726466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like isoform 1 [Strongylocentrotus purpuratus]
Length = 305
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 184 SSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDK 242
+S Y VF+ ITEHA A L+++L + S +HW+ S+ LFS C CG+ + +
Sbjct: 227 ASKYEVFQKITEHATAASLRYYLPTMQDLSFRSFMHWLNSFSKLFSTPCRLCGKYIKDN- 285
Query: 243 RLALLLPPVSRPYRHFFP 260
LPP R +R P
Sbjct: 286 -----LPPTWRCFRTVEP 298
>gi|390346052|ref|XP_780142.2| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like isoform 2 [Strongylocentrotus purpuratus]
Length = 274
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 184 SSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDK 242
+S Y VF+ ITEHA A L+++L + S +HW+ S+ LFS C CG+ + +
Sbjct: 196 ASKYEVFQKITEHATAASLRYYLPTMQDLSFRSFMHWLNSFSKLFSTPCRLCGKYIKDN- 254
Query: 243 RLALLLPPVSRPYRHFFP 260
LPP R +R P
Sbjct: 255 -----LPPTWRCFRTVEP 267
>gi|313213673|emb|CBY40577.1| unnamed protein product [Oikopleura dioica]
gi|313224963|emb|CBY20755.1| unnamed protein product [Oikopleura dioica]
Length = 115
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 161 TIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGIRT----ETSLYFL 216
TIE V ++G + + S Y V R IT HA A F T + ++
Sbjct: 11 TIERVFVRGLDEEDGLDGLDLFSESQYKVMRMITSHAAAATLHFYHTNTTNHPDATIRLF 70
Query: 217 LHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
L W+ SY+ LF + C +CG+LL LPP R YR P
Sbjct: 71 LQWLRSYKQLFQEKCKRCGKLLRDG------LPPTWRDYRTMAP 108
>gi|156393486|ref|XP_001636359.1| predicted protein [Nematostella vectensis]
gi|156223461|gb|EDO44296.1| predicted protein [Nematostella vectensis]
Length = 307
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGT 199
+ +E+ P F+AI+ L VG + + S + VF+ +T++A +
Sbjct: 178 TALEVTVPKTFKAIIMLKGVGIDQVKIRGLYECSLMEKKDDIWSPSKHIVFQKLTDYANS 237
Query: 200 A-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
A L ++ T + L+ W+ S+ +FS+ C+KC + L + A LLPP R
Sbjct: 238 AALHYYNSAEPFTQILCLMKWLDSFHGMFSRKCTKCNQHLKEESENA-LLPPCWRTMDAL 296
Query: 259 FP 260
P
Sbjct: 297 LP 298
>gi|241999332|ref|XP_002434309.1| cofactor required for Sp1 transcriptional activation, putative
[Ixodes scapularis]
gi|215496068|gb|EEC05709.1| cofactor required for Sp1 transcriptional activation, putative
[Ixodes scapularis]
Length = 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITEHA 197
+V+++ RA+VSL + IE V F+ D + + S Y VF+ +T+HA
Sbjct: 188 AVLKITLSRTLRALVSLRGL-IIEWVIVKGFNEDFYTDDDQLDMWTKSRYQVFQKVTDHA 246
Query: 198 GTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A L FF + ++ L W+ SY LFS C +CG RL +PP R R
Sbjct: 247 NAAMLHFFSPQLPDLAVKSFLTWLHSYLNLFSTPCRRCG------TRLQHNMPPTWRDVR 300
Query: 257 HF 258
+
Sbjct: 301 NL 302
>gi|442754775|gb|JAA69547.1| Putative cofactor required for sp1 transcriptional activation
[Ixodes ricinus]
Length = 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITEHA 197
+V+++ RA+VSL + IE V F+ D + + S Y VF+ +T+HA
Sbjct: 188 AVLKITLSRTLRALVSLRGL-IIEWVIVKGFNEDFYTDDDQLDMWTKSRYQVFQKVTDHA 246
Query: 198 GTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A L FF + ++ L W+ SY LFS C +CG RL +PP R R
Sbjct: 247 NAAMLHFFSPQLPDLAVKSFLTWLHSYLNLFSTPCRRCG------TRLQHNMPPTWRDVR 300
Query: 257 HF 258
+
Sbjct: 301 NL 302
>gi|443693968|gb|ELT95220.1| hypothetical protein CAPTEDRAFT_184099 [Capitella teleta]
Length = 311
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 138 KVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITE 195
+ +V+ + RA++ L + IE +V F+ D + + S Y V+R +++
Sbjct: 183 QAAVLVVTLAKTLRAVIVLRGL-LIEWVSVKGFNEDVYKENKQVDIWSPSKYAVYRKVSD 241
Query: 196 HAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRP 254
HA +A L F+ ++ E +L + W+ +Y +LFS C KC + L + LPP R
Sbjct: 242 HASSAMLHFYHPLKPELALRSFMLWLHAYVSLFSTPCHKCNKFLVDN------LPPTWRD 295
Query: 255 YR 256
R
Sbjct: 296 MR 297
>gi|348671859|gb|EGZ11679.1| hypothetical protein PHYSODRAFT_562727 [Phytophthora sojae]
Length = 2325
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%)
Query: 179 IHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLL 238
+ A S +++FR +T H AL F ET Y L W+ Y ++ CS C +LL
Sbjct: 2235 LGAWSESSHNLFRLVTLHGRKALDHFRKQHPETCFYHLFTWLGYYDKIYQTPCSFCKKLL 2294
Query: 239 AMDKRLALLLPPVSRPY 255
A + +PP R Y
Sbjct: 2295 AKESEEWAYVPPSFRDY 2311
>gi|301092339|ref|XP_002997027.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112153|gb|EEY70205.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 413
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 179 IHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLL 238
+ A S +++FR +T H AL F R ET Y L W+ Y + CS C +LL
Sbjct: 323 LGAWSESSHNLFRLVTLHGRKALDHFRKQRPETCFYHLFTWLGYYDKINQTPCSFCKKLL 382
Query: 239 AMDKRLALLLPPVSRPY 255
A + +PP R Y
Sbjct: 383 AKENEEWAYVPPSFRDY 399
>gi|357608658|gb|EHJ66083.1| hypothetical protein KGM_00604 [Danaus plexippus]
Length = 299
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 98 KRASSLPSSANESPLELLKEHNF--HSSSKLRPGLQNTVAADKVSVIELLFPSIFRAIVS 155
KR L S+ N +PL++ N S + ++ + A++ +V+++ + +A+V+
Sbjct: 139 KRRGKLQSNHNVAPLQVDNVINNIDRSYNDMKITISRPFASN--AVVQINLSHVLKAVVA 196
Query: 156 LHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRTETSLY 214
+ +E V + G + S +HVFR +TE+A A L F+ E ++
Sbjct: 197 FKGL-LMEWVMVKGY-----GETLDLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVR 250
Query: 215 FLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ W+ SY LFS+ C +CG L +LPP R +R P
Sbjct: 251 SFMTWLHSYVNLFSEPCKRCGCHLHHTS----MLPPAWRDFRTLEP 292
>gi|312371115|gb|EFR19375.1| hypothetical protein AND_22596 [Anopheles darlingi]
Length = 1169
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR + +HA +A L FF E ++ + W SY TLF+ C KCG K
Sbjct: 1092 SRHQVFRKVQDHAHSAMLHFFSPTLPELAIRSFITWFRSYVTLFADPCKKCG------KH 1145
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R R P
Sbjct: 1146 LHNTLPPTWRDLRTLEP 1162
>gi|427794159|gb|JAA62531.1| Putative cofactor required for sp1 transcriptional activation
subunit 8, partial [Rhipicephalus pulchellus]
Length = 317
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITEHA 197
+V+++ RA+V L + IE V F+ D + + S Y VF+ +TEHA
Sbjct: 194 AVLKITLSRTLRALVCLRGL-IIEWVLVKAFNEDFYTDDDQLDMWSKSRYQVFQKVTEHA 252
Query: 198 GTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A L FF + ++ L W+ SY LFS C +CG RL +PP R R
Sbjct: 253 NAAMLHFFSPQLPDLAVKSFLTWLHSYLHLFSAPCRRCG------TRLQHNMPPTWRDLR 306
Query: 257 HF 258
+
Sbjct: 307 NL 308
>gi|193613392|ref|XP_001945928.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Acyrthosiphon pisum]
Length = 302
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 149 IFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHAR--GSSVYHVFRHITEHAGTA-LQFFL 205
+ +AI+S V IE V F+ N + S Y+VFR IT+HA A L F
Sbjct: 188 VLQAIISFKGV-MIEWVIVKGFNEPINPNSLQQELWQESRYYVFRKITDHANAAMLHFSS 246
Query: 206 GIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
+ S+ + W+ SY LF+ VC CG RL PP R R
Sbjct: 247 PTLPDLSVRSFMTWLNSYLILFNSVCKSCG------NRLLNAYPPTWRDLR 291
>gi|325182224|emb|CCA16678.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 443
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 179 IHARGSSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLL 238
+ A S + +F+ IT HA A++ F +T Y L W Y+ L+ C+ C R+L
Sbjct: 351 MGAWAESRHQLFQLITLHARKAMRHFKAYHPKTCFYHLFTWFGYYEKLYQTPCTICKRIL 410
Query: 239 AMDKRLALLLPPVSRPY 255
+ +PP R Y
Sbjct: 411 IKENEEWAFMPPSFRDY 427
>gi|91079036|ref|XP_974974.1| PREDICTED: similar to mediator complex, subunit, putative
[Tribolium castaneum]
gi|270003666|gb|EFA00114.1| hypothetical protein TcasGA2_TC002930 [Tribolium castaneum]
Length = 295
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 90 TYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKLRPGLQNTVAADK----VSVIELL 145
TY+ KR + S+ N SP E++ E+ + +L P + T+ A + VI+
Sbjct: 130 TYKTFSTTKRRKTQTSNHNVSP-EVI-ENLITNIDRLFPDV--TITASRPFLPNPVIQAC 185
Query: 146 FPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTAL-QFF 204
+ +AI++ + IE V S N + A S Y VF+ +TE+ A+ F
Sbjct: 186 LGRVLKAIIAFKGL-MIEWVVVKALSE---SNDLWAE--SRYKVFKKVTENCHAAMCHFH 239
Query: 205 LGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ E ++ +HW SY TLFS C +CG L + LPP R R P
Sbjct: 240 SPMMPELAVKSFMHWFHSYNTLFSAPCKRCGNHLLGN------LPPTWRDLRTLEP 289
>gi|291226173|ref|XP_002733069.1| PREDICTED: putative cofactor required for Sp1 transcriptional
activation subunit 8-like [Saccoglossus kowalevskii]
Length = 305
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA A L + L E + + W+ SY TLFS C +CG+ L +
Sbjct: 228 SKYRVFQKLTDHAMAAMLHYHLPHLPEIGIRSFMTWLHSYTTLFSTACHRCGKYLNGN-- 285
Query: 244 LALLLPPVSRPYR 256
+PP R +R
Sbjct: 286 ----IPPTWRDFR 294
>gi|158290685|ref|XP_312260.3| AGAP002664-PA [Anopheles gambiae str. PEST]
gi|158706152|sp|Q7QCJ9.3|MED27_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Mediator complex subunit 27
gi|157018015|gb|EAA08132.3| AGAP002664-PA [Anopheles gambiae str. PEST]
Length = 295
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 98 KRASSLPSSANESP--LELLKEHNFHSSSKL---RPGLQNTVAADKVSVIELLFPSIFRA 152
KR SLPSS +P +E L +++ L RP + N +++ + + RA
Sbjct: 134 KRRRSLPSSHLATPQMVENLIGSIHYNNMNLKIARPFMTN-------AILHITIARVLRA 186
Query: 153 IVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRTET 211
V L + IE V + S + VFR + +HA +A L FF E
Sbjct: 187 AVILKGL-LIEWVTVKGYEESLLDGVDEQWTESRHQVFRKVQDHAHSAMLHFFSPTLPEL 245
Query: 212 SLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
++ + W SY TLF+ C KCG K L LPP R R P
Sbjct: 246 AIRSFITWFRSYVTLFADPCKKCG------KHLHNTLPPTWRDLRTLEP 288
>gi|70888321|gb|AAZ13763.1| cofactor required for Sp1 transcriptional activation subunit 8
34kDa [Homo sapiens]
Length = 237
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 123 SSKLRPGLQNTV-------AADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEG 175
S+K RP Q T D +S I+ +FP + +I P GT + +S
Sbjct: 105 SAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEM--SIHLSRPNGTSAMLLLDIWS---- 158
Query: 176 GNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 234
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +C
Sbjct: 159 --------KSDYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRC 210
Query: 235 GRLLAMDKRLALLLPPVSRPYR 256
G+ L LPP R +R
Sbjct: 211 GKFLQDG------LPPTWRDFR 226
>gi|194741154|ref|XP_001953054.1| GF17578 [Drosophila ananassae]
gi|190626113|gb|EDV41637.1| GF17578 [Drosophila ananassae]
Length = 293
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 98 KRASSLP-SSANESP---LELLKEHNF--HSSSKL-RPGLQNTVAADKVSVIELLFPSIF 150
++ LP SS N P +LL E N H+S ++ RP N VA +S + + +F
Sbjct: 131 QKRQRLPFSSFNNDPDHIEKLLSEINTPAHTSYRIIRPFGTNVVAIVTISNV-MKAAIVF 189
Query: 151 RAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRT 209
+ ++ IE V F DE ++ S Y VFR + EHA +A L FF
Sbjct: 190 KGVL-------IEWVTVKGF--DEALDHDDLWAESRYEVFRKVQEHAHSAMLHFFSPTLP 240
Query: 210 ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ ++ + W+ S+ LF + C +CG+ +A LPP R R P
Sbjct: 241 DLAVKSYVTWLNSHIKLFLEPCKRCGKFVAHG------LPPTWRDLRTLEP 285
>gi|262091809|gb|ACY25396.1| mediator complex subunit 27 CG1245-PA-like protein [Plutella
xylostella]
Length = 299
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGT 199
+V+++ + +A+V+ + +E V + G + S ++VFR +TE+A
Sbjct: 181 AVVQISLGHVLKAVVAFKGL-LMEWVMVKGY-----GETLDLWNESRHNVFRKVTENAHA 234
Query: 200 A-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHF 258
A L F+ E ++ + W+ SY LFS+ C +CG L LLPP R +R
Sbjct: 235 AMLHFYSPTLPELAVRSFMTWLHSYVNLFSEACKRCGCHLHHTS----LLPPAWRDFRTL 290
Query: 259 FP 260
P
Sbjct: 291 EP 292
>gi|391328805|ref|XP_003738874.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Metaseiulus occidentalis]
Length = 321
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 185 SVYHVFRHITEHAGTALQFFLGIRT-ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA A+ F + ++ LHW+ SY TLFS C +C R L +
Sbjct: 244 SRYKVFQKVTDHANAAMLHFHSPNLHDLAVKSFLHWLQSYSTLFSDACKRCNRHLMHN-- 301
Query: 244 LALLLPPVSRPYRHF 258
PP R R +
Sbjct: 302 ----FPPTWRCVRTY 312
>gi|395844362|ref|XP_003794931.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Otolemur garnettii]
Length = 275
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 34/145 (23%)
Query: 123 SSKLRPGLQNTVAA-------DKVSVIELLFPSIFRAIVSLH---PVGTIEPDAVAFFSP 172
S+K RP Q T D +S I+ +FP + S+H P GT + +S
Sbjct: 143 SAKRRPKAQPTTLVLPLQYVDDVISRIDRMFPEM-----SIHLSRPNGTSAMLLLDIWS- 196
Query: 173 DEGGNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVC 231
S Y VF+ +T+HA TAL + L + + + W+ SY LF C
Sbjct: 197 -----------KSSYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPC 245
Query: 232 SKCGRLLAMDKRLALLLPPVSRPYR 256
+CG+ L LPP R +R
Sbjct: 246 QRCGKFLQDG------LPPTWRDFR 264
>gi|359751479|ref|NP_001240810.1| mediator of RNA polymerase II transcription subunit 27 isoform 2
[Homo sapiens]
gi|332255417|ref|XP_003276828.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Nomascus leucogenys]
gi|397503684|ref|XP_003822449.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Pan paniscus]
gi|426363376|ref|XP_004048816.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Gorilla gorilla gorilla]
gi|119608395|gb|EAW87989.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa, isoform CRA_a [Homo sapiens]
Length = 275
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 123 SSKLRPGLQNTVAA-------DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEG 175
S+K RP Q T D +S I+ +FP + +I P GT + +S
Sbjct: 143 SAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEM--SIHLSRPNGTSAMLLLDIWS---- 196
Query: 176 GNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 234
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +C
Sbjct: 197 --------KSNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRC 248
Query: 235 GRLLAMDKRLALLLPPVSRPYR 256
G+ L LPP R +R
Sbjct: 249 GKFLQDG------LPPTWRDFR 264
>gi|348536106|ref|XP_003455538.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Oreochromis niloticus]
Length = 311
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CGR L
Sbjct: 234 SQYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQSSCQRCGRFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|410979312|ref|XP_003996029.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Felis catus]
Length = 275
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 123 SSKLRPGLQNTVAA-------DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEG 175
S+K RP Q T D +S I+ +FP + +I P GT + +S
Sbjct: 143 SAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEM--SIHLSRPNGTSAMLLLDIWS---- 196
Query: 176 GNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 234
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +C
Sbjct: 197 --------KSNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRC 248
Query: 235 GRLLAMDKRLALLLPPVSRPYR 256
G+ L LPP R +R
Sbjct: 249 GKFLQDG------LPPTWRDFR 264
>gi|346469587|gb|AEO34638.1| hypothetical protein [Amblyomma maculatum]
Length = 357
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD--EGGNYIHARGSSVYHVFRHITEHA 197
+V+++ RA+V L + IE V F+ D + + S Y VF+ +T+HA
Sbjct: 234 AVLKITLSRTLRALVCLRGL-IIEWVLVKGFNEDFYTDDDQLDMWSKSRYQVFQKVTDHA 292
Query: 198 GTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
A L FF + ++ L W+ SY LFS C +CG RL +PP R R
Sbjct: 293 NAAMLHFFSPQLPDLAVKSYLTWLHSYLHLFSAPCRRCG------TRLQHNMPPTWRDLR 346
Query: 257 HF 258
+
Sbjct: 347 NL 348
>gi|432116572|gb|ELK37365.1| Mediator of RNA polymerase II transcription subunit 27 [Myotis
davidii]
Length = 311
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG++L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYMKLFQAPCQRCGKILQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|320168491|gb|EFW45390.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 407
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 19/111 (17%)
Query: 179 IHARGSSVYHVFRHITEHAGTALQFFLGIRTETS------LYFLLHWICSYQTLFSKVCS 232
+H RGS+ YH+++ +++ A + L F + S L+ L W+ Y L S C
Sbjct: 300 LHGRGSA-YHMYQQLSDFATSVLPLFFEQASARSSATMPPLWRLFRWLHGYYHLTSARCG 358
Query: 233 KCGRLLAMDKRLALLLPPVSRPYRHFFPTVTSSA-------QLISSTNEQS 276
C L +D LLPP+ P +SSA Q +SST QS
Sbjct: 359 ACLTHLRLDAGAGTLLPPIC-----LMPPASSSATPHCFHPQCVSSTFTQS 404
>gi|198436713|ref|XP_002131337.1| PREDICTED: similar to cofactor required for Sp1 transcriptional
activation, subunit 8 [Ciona intestinalis]
Length = 330
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 185 SVYHVFRHITEHAGTA-LQFFL--GIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S + R IT+HA TA LQ+ + E L + L W+ SY+ LF CS CG
Sbjct: 251 SQFECMRRITDHAMTAVLQYSTTHATQPEIPLKYFLLWLQSYKNLFIDPCSICG------ 304
Query: 242 KRLALLLPPVSRPYRH 257
K L LPPV R +R+
Sbjct: 305 KHLDGGLPPVWRDFRN 320
>gi|402896236|ref|XP_003911212.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Papio anubis]
Length = 275
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 123 SSKLRPGLQNTVAA-------DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEG 175
S+K RP Q T D ++ I+ +FP + +I P GT + +S
Sbjct: 143 SAKRRPKAQPTTLVLPPQYVDDVINRIDRMFPEM--SIHLSRPNGTSAMLLLDIWS---- 196
Query: 176 GNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 234
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +C
Sbjct: 197 --------KSNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRC 248
Query: 235 GRLLAMDKRLALLLPPVSRPYR 256
G+ L LPP R +R
Sbjct: 249 GKFLQDG------LPPTWRDFR 264
>gi|384248729|gb|EIE22212.1| hypothetical protein COCSUDRAFT_33454 [Coccomyxa subellipsoidea
C-169]
Length = 82
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 216 LLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFPTVTSSAQLISSTNEQ 275
LL ++ +Y+ LF++ CS G+LLA+D LLPP+ RP++ S + L++ N
Sbjct: 11 LLLYLSTYRNLFTRPCSATGKLLALDAVTNQLLPPIVRPFKR------SRSVLLAMAN-- 62
Query: 276 SSDVVNAYH 284
S+ A+H
Sbjct: 63 GSEPCQAFH 71
>gi|170055856|ref|XP_001863768.1| mediator complex [Culex quinquefasciatus]
gi|167875736|gb|EDS39119.1| mediator complex [Culex quinquefasciatus]
Length = 295
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 20/169 (11%)
Query: 98 KRASSLPSSANESPLELLK-----EHNFHSSSKLRPGLQNTVAADKVSVIELLFPSIFRA 152
KR SLPSS +P + +N + +RP + N +++ + + RA
Sbjct: 134 KRRRSLPSSHLATPQTVDNLIGSIHYNNMNLKIVRPFMTN-------AILHVTIARVLRA 186
Query: 153 IVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRTET 211
V L + IE V + S + VFR + +HA +A L FF E
Sbjct: 187 AVILKGL-LIEWVTVKGYDESLLDGVDEHWTESRHQVFRKVQDHAHSAMLHFFSPTLPEL 245
Query: 212 SLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
++ + W SY TLF C KCG K L LPP R R P
Sbjct: 246 AIRSFVTWFRSYVTLFVDPCKKCG------KHLHNTLPPTWRDLRTLEP 288
>gi|426384256|ref|XP_004058687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Gorilla gorilla gorilla]
Length = 311
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TA L + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTAPLHYQLPQMPDVVVRSFMTWVRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|157116185|ref|XP_001652785.1| mediator complex, subunit, putative [Aedes aegypti]
gi|121955918|sp|Q171Y8.1|MED27_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Mediator complex subunit 27
gi|108876573|gb|EAT40798.1| AAEL007482-PA [Aedes aegypti]
Length = 295
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 98 KRASSLPSSANESPL---ELLKEHNFHSSS--KLRPGLQNTVAADKVSVIELLFPSIFRA 152
KR SLPSS +P L+ +F + + +RP + N +++ + + RA
Sbjct: 134 KRRRSLPSSHLATPQTVDNLIGSIHFPNMNLKIVRPFMTN-------AILHITIARVLRA 186
Query: 153 IVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRTET 211
V L + IE V F S + VFR + +HA +A L FF +
Sbjct: 187 AVILKGL-LIEWVTVKGFDESLLDGVDEHWTVSRHQVFRKVQDHAHSAMLHFFSPTLPDL 245
Query: 212 SLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
++ + W SY TLF+ C KCG K L LPP R R P
Sbjct: 246 AIRSFITWFRSYLTLFADPCKKCG------KHLHNTLPPTWRDLRTLEP 288
>gi|76253678|ref|NP_081172.2| mediator of RNA polymerase II transcription subunit 27 [Mus
musculus]
gi|83288030|sp|Q9DB40.2|MED27_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|74192647|dbj|BAB23906.2| unnamed protein product [Mus musculus]
gi|148676467|gb|EDL08414.1| cofactor required for Sp1 transcriptional activation, subunit 8
[Mus musculus]
Length = 311
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SSYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|426226077|ref|XP_004007180.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Ovis aries]
Length = 346
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 196 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 253
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 254 ----LPPTWRDFR 262
>gi|16741439|gb|AAH16537.1| Mediator complex subunit 27 [Mus musculus]
Length = 273
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 196 SSYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 253
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 254 ----LPPTWRDFR 262
>gi|291411428|ref|XP_002721989.1| PREDICTED: mediator complex subunit 27 [Oryctolagus cuniculus]
Length = 311
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYVKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|432875743|ref|XP_004072885.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Oryzias latipes]
Length = 311
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG L
Sbjct: 234 SQYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYSKLFQASCQRCGHFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|403256556|ref|XP_003920938.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 2 [Saimiri boliviensis boliviensis]
Length = 275
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Query: 123 SSKLRPGLQNTVAA-------DKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPDEG 175
S+K RP Q T D +S I+ +FP + +I P G + +S
Sbjct: 143 SAKRRPKAQPTTLVLPPQYVDDVISRIDRMFPEM--SIHLSRPNGASAMLLLDIWS---- 196
Query: 176 GNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKC 234
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +C
Sbjct: 197 --------KSNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRC 248
Query: 235 GRLLAMDKRLALLLPPVSRPYR 256
G+ L LPP R +R
Sbjct: 249 GKFLQDG------LPPTWRDFR 264
>gi|332224833|ref|XP_003261573.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Nomascus leucogenys]
Length = 311
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TA L + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTAPLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|157818903|ref|NP_001100035.1| mediator of RNA polymerase II transcription subunit 27 [Rattus
norvegicus]
gi|149039162|gb|EDL93382.1| similar to cofactor required for Sp1 transcriptional activation
subunit 8 (predicted), isoform CRA_a [Rattus norvegicus]
gi|187469297|gb|AAI67032.1| Mediator complex subunit 27 [Rattus norvegicus]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SSYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|388452666|ref|NP_001253437.1| mediator of RNA polymerase II transcription subunit 27 [Macaca
mulatta]
gi|402896234|ref|XP_003911211.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Papio anubis]
gi|355567386|gb|EHH23727.1| hypothetical protein EGK_07261 [Macaca mulatta]
gi|355752977|gb|EHH57023.1| hypothetical protein EGM_06581 [Macaca fascicularis]
gi|383422991|gb|AFH34709.1| mediator of RNA polymerase II transcription subunit 27 [Macaca
mulatta]
gi|384944386|gb|AFI35798.1| mediator of RNA polymerase II transcription subunit 27 [Macaca
mulatta]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|118099361|ref|XP_415455.2| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Gallus gallus]
Length = 312
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 173 DEGGNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVC 231
D+G I ++ S Y VF+ +T+HA TAL + L + + + W+ SY LF C
Sbjct: 225 DDGKLDIWSK--SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPC 282
Query: 232 SKCGRLLAMDKRLALLLPPVSRPYR 256
+CG+ L LPP R +R
Sbjct: 283 QRCGKFLQDG------LPPTWRDFR 301
>gi|326930394|ref|XP_003211332.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Meleagris gallopavo]
Length = 312
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 173 DEGGNYIHARGSSVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVC 231
D+G I ++ S Y VF+ +T+HA TAL + L + + + W+ SY LF C
Sbjct: 225 DDGKLDIWSK--SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPC 282
Query: 232 SKCGRLLAMDKRLALLLPPVSRPYR 256
+CG+ L LPP R +R
Sbjct: 283 QRCGKFLQDG------LPPTWRDFR 301
>gi|28558979|ref|NP_004260.2| mediator of RNA polymerase II transcription subunit 27 isoform 1
[Homo sapiens]
gi|197098548|ref|NP_001127559.1| mediator of RNA polymerase II transcription subunit 27 [Pongo
abelii]
gi|332255415|ref|XP_003276827.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Nomascus leucogenys]
gi|397503682|ref|XP_003822448.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Pan paniscus]
gi|426363374|ref|XP_004048815.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Gorilla gorilla gorilla]
gi|74737195|sp|Q6P2C8.1|MED27_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27;
AltName: Full=P37 TRAP/SMCC/PC2 subunit; AltName:
Full=Transcriptional coactivator CRSP34
gi|75041309|sp|Q5R6U8.1|MED27_PONAB RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|40555882|gb|AAH64608.1| Mediator complex subunit 27 [Homo sapiens]
gi|55731612|emb|CAH92512.1| hypothetical protein [Pongo abelii]
gi|119608396|gb|EAW87990.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa, isoform CRA_b [Homo sapiens]
gi|119608399|gb|EAW87993.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa, isoform CRA_b [Homo sapiens]
gi|167773683|gb|ABZ92276.1| mediator complex subunit 27 [synthetic construct]
gi|261859080|dbj|BAI46062.1| mediator complex subunit 27 [synthetic construct]
gi|410208952|gb|JAA01695.1| mediator complex subunit 27 [Pan troglodytes]
gi|410249320|gb|JAA12627.1| mediator complex subunit 27 [Pan troglodytes]
gi|410289302|gb|JAA23251.1| mediator complex subunit 27 [Pan troglodytes]
gi|410333743|gb|JAA35818.1| mediator complex subunit 27 [Pan troglodytes]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|395844360|ref|XP_003794930.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Otolemur garnettii]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SSYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|380818112|gb|AFE80930.1| mediator of RNA polymerase II transcription subunit 27 [Macaca
mulatta]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|348570202|ref|XP_003470886.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Cavia porcellus]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|149738194|ref|XP_001498818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Equus caballus]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|417398760|gb|JAA46413.1| Putative mediator of rna polymerase ii transcription subunit 27
[Desmodus rotundus]
Length = 311
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|332373538|gb|AEE61910.1| unknown [Dendroctonus ponderosae]
Length = 295
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +TE+ A+ F + E ++ +HW SY TLFS C +C K
Sbjct: 219 SRYKVFKKVTENCHAAMCHFHSPMMPELAVRSFMHWFHSYITLFSAPCKRCS------KH 272
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R R P
Sbjct: 273 LNCNLPPTWRDLRSLEP 289
>gi|397503418|ref|XP_003822321.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Pan paniscus]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMLDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|119608398|gb|EAW87992.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa, isoform CRA_d [Homo sapiens]
Length = 312
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 235 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 292
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 293 ----LPPTWRDFR 301
>gi|7141322|gb|AAF37290.1|AF230382_1 p37 TRAP/SMCC/PC2 subunit [Homo sapiens]
Length = 273
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 196 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 253
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 254 ----LPPTWRDFR 262
>gi|148236426|ref|NP_001087771.1| mediator of RNA polymerase II transcription subunit 27-A [Xenopus
laevis]
gi|82181016|sp|Q642Q3.1|MD27A_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
27-A; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8-A; Short=CRSP
complex subunit 8-A; AltName: Full=Mediator complex
subunit 27-A
gi|51896026|gb|AAH81194.1| MGC84583 protein [Xenopus laevis]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|344271453|ref|XP_003407552.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Loxodonta africana]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|58331966|ref|NP_001011132.1| mediator of RNA polymerase II transcription subunit 27 [Xenopus
(Silurana) tropicalis]
gi|82180443|sp|Q5XHA1.1|MED27_XENTR RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|54261457|gb|AAH84171.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa [Xenopus (Silurana) tropicalis]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|48675955|ref|NP_001001644.1| mediator of RNA polymerase II transcription subunit 27 [Sus scrofa]
gi|354499305|ref|XP_003511750.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Cricetulus griseus]
gi|75043805|sp|Q6Q7J5.1|MED27_PIG RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|45758482|gb|AAS76547.1| cofactor required for Sp1 transcriptional activation subunit 8 [Sus
scrofa]
gi|344254761|gb|EGW10865.1| Mediator of RNA polymerase II transcription subunit 27 [Cricetulus
griseus]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|403256554|ref|XP_003920937.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Saimiri boliviensis boliviensis]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|350536749|ref|NP_001232260.1| putative cofactor required for Sp1 transcriptional activation
subunit 8 [Taeniopygia guttata]
gi|197127228|gb|ACH43726.1| putative cofactor required for Sp1 transcriptional activation
subunit 8 [Taeniopygia guttata]
Length = 312
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 235 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 292
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 293 ----LPPTWRDFR 301
>gi|410979310|ref|XP_003996028.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Felis catus]
gi|351697290|gb|EHB00209.1| Mediator of RNA polymerase II transcription subunit 27
[Heterocephalus glaber]
Length = 311
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|449269032|gb|EMC79841.1| Mediator of RNA polymerase II transcription subunit 27 [Columba
livia]
Length = 312
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 235 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 292
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 293 ----LPPTWRDFR 301
>gi|94966889|ref|NP_001035636.1| mediator of RNA polymerase II transcription subunit 27 [Bos taurus]
gi|122137064|sp|Q2TBN7.1|MED27_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|83638626|gb|AAI09884.1| Mediator complex subunit 27 [Bos taurus]
gi|296482056|tpg|DAA24171.1| TPA: mediator of RNA polymerase II transcription subunit 27 [Bos
taurus]
gi|440900077|gb|ELR51286.1| Mediator of RNA polymerase II transcription subunit 27 [Bos
grunniens mutus]
Length = 311
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|395506313|ref|XP_003757479.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Sarcophilus harrisii]
Length = 294
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 217 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 274
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 275 ----LPPTWRDFR 283
>gi|154422632|ref|XP_001584328.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918574|gb|EAY23342.1| hypothetical protein TVAG_186500 [Trichomonas vaginalis G3]
Length = 280
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 27/156 (17%)
Query: 109 ESPLELLKEHNFHSSSKLRPGLQNTVAADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVA 168
ESP+ ++NF+ +L P L N+V + VS + P I + + V I
Sbjct: 99 ESPV---YKYNFN---ELIPEL-NSVLDESVSFTDGFLPFISIPVADIFTVKII------ 145
Query: 169 FFSPDEGGNYIHARGSSVYH----------VFRHITEHAGTAL-QFFLGIRTETSLYFLL 217
FS + ++ G++ Y VFR ++ + AL F L +++ + F +
Sbjct: 146 -FSLENQPAFVVVHGATEYEKSQFEQSDFRVFRTLSVYFSRALPDFILKYKSKAIVEFAI 204
Query: 218 HWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSR 253
W+ SY+ LFS C+KC + ++ D LLPP+ R
Sbjct: 205 -WLKSYKNLFSAPCTKCEQFISRD-LTGDLLPPIIR 238
>gi|73967722|ref|XP_849826.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
isoform 1 [Canis lupus familiaris]
Length = 311
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|4220892|gb|AAD12721.1| transcriptional co-activator CRSP34 [Homo sapiens]
Length = 273
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 196 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQGPCQRCGKFLQDG-- 253
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 254 ----LPPTWRDFR 262
>gi|334311857|ref|XP_003339675.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 27-like [Monodelphis domestica]
Length = 311
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|148234405|ref|NP_001089740.1| mediator of RNA polymerase II transcription subunit 27-B [Xenopus
laevis]
gi|123899823|sp|Q3B8G8.1|MD27B_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
27-B; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8-B; Short=CRSP
complex subunit 8-B; AltName: Full=Mediator complex
subunit 27-B
gi|77748210|gb|AAI06445.1| Med27-b protein [Xenopus laevis]
Length = 311
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|405975414|gb|EKC39980.1| Mediator of RNA polymerase II transcription subunit 27 [Crassostrea
gigas]
Length = 311
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFS----PDEGGNYIHARGSSVYHVFRHITE 195
+V+++ +A++ L + IE ++ +S D+G I ++ S Y VF +T+
Sbjct: 187 TVLQITLAKTLKAVIVLRGL-LIEYVSIKAYSEDFLTDDGRPDIWSK--SKYQVFNKVTD 243
Query: 196 --HAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCG 235
AGT + F+ + SL L W+ +Y+TLFS CSKCG
Sbjct: 244 LVTAGT-IHFYHPQLPDASLKSFLIWLNNYKTLFSAPCSKCG 284
>gi|355702040|gb|AES01798.1| mediator complex subunit 27 [Mustela putorius furo]
Length = 310
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|47210195|emb|CAF90023.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD---EGGNYIHARGSSVYHVFRHITEH 196
+V+ + + +AIV + + I+ V FS + E G + S Y VF+ +T+H
Sbjct: 188 AVLLVTLGKVLKAIVVMRSL-FIDRTVVRGFSENVYNEDGK-LDIWTKSQYQVFQKVTDH 245
Query: 197 AGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPY 255
A TAL + L + + + W+ SY LF C +CG L LPP R +
Sbjct: 246 ATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQSSCQRCGHFLQDG------LPPTWRDF 299
Query: 256 R 256
R
Sbjct: 300 R 300
>gi|119608397|gb|EAW87991.1| cofactor required for Sp1 transcriptional activation, subunit 8,
34kDa, isoform CRA_c [Homo sapiens]
Length = 439
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 362 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 419
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 420 ----LPPTWRDFR 428
>gi|149410294|ref|XP_001506492.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like, partial [Ornithorhynchus anatinus]
Length = 243
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 166 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 223
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 224 ----LPPTWRDFR 232
>gi|410929887|ref|XP_003978330.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Takifugu rubripes]
Length = 311
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 140 SVIELLFPSIFRAIVSLHPVGTIEPDAVAFFSPD---EGGNYIHARGSSVYHVFRHITEH 196
+V+ + + +AIV + + I+ V FS + E G + S Y VF+ +T+H
Sbjct: 188 AVLLVTLGKVLKAIVVMRSL-FIDRTVVRGFSENIYNEDGK-LDIWTKSQYQVFQKVTDH 245
Query: 197 AGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPY 255
A TAL + L + + + W+ SY LF C +CG L LPP R +
Sbjct: 246 ATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQSPCQRCGHFLQDG------LPPTWRDF 299
Query: 256 R 256
R
Sbjct: 300 R 300
>gi|358339040|dbj|GAA47172.1| mediator of RNA polymerase II transcription subunit 27-B
[Clonorchis sinensis]
Length = 554
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + +F+ IT A A L F + +++ L HW+ SY LF+ C +CG+LL D
Sbjct: 466 SRFALFQRITTLAQCAILHFSNDYQPPSAVRGLFHWLHSYHDLFTTPCGRCGQLLGQDVS 525
Query: 244 LALLLPPVSRPY 255
L PV R Y
Sbjct: 526 L-----PVWRSY 532
>gi|444519238|gb|ELV12676.1| Mediator of RNA polymerase II transcription subunit 27 [Tupaia
chinensis]
Length = 219
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 142 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYVKLFQAPCQRCGKFLQDG-- 199
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 200 ----LPPTWRDFR 208
>gi|195449954|ref|XP_002072299.1| GK22404 [Drosophila willistoni]
gi|194168384|gb|EDW83285.1| GK22404 [Drosophila willistoni]
Length = 293
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + EHA +A L FF + ++ + W+ S+ LF + C +CG+ +A
Sbjct: 213 AESRYEVFRKVQEHAHSAMLHFFSPTLPDLAVKSYVTWLNSHIKLFLEPCKRCGKYIASG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|242018233|ref|XP_002429583.1| CRSP complex subunit, putative [Pediculus humanus corporis]
gi|212514550|gb|EEB16845.1| CRSP complex subunit, putative [Pediculus humanus corporis]
Length = 299
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE++ A L F+ E ++ + W S+ TLFS+ C +CG
Sbjct: 222 SRHKVFRKVTENSHAAMLHFYSPTLPELAVRSFMTWFHSFNTLFSEPCKRCG------NH 275
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R +R P
Sbjct: 276 LHNALPPTWRDFRTLEP 292
>gi|195108661|ref|XP_001998911.1| GI23367 [Drosophila mojavensis]
gi|193915505|gb|EDW14372.1| GI23367 [Drosophila mojavensis]
Length = 293
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + EHA +A L FF + ++ + W+ S+ LF + C +CG+ +A
Sbjct: 213 AESRYEVFRKVQEHAHSAMLHFFSPTLPDLAVKSYVTWLNSHIKLFLEPCKRCGKYIANG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|313224964|emb|CBY20756.1| unnamed protein product [Oikopleura dioica]
Length = 327
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 162 IEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQF--FLGIRTETSLYFLLHW 219
IE V DE + + +S ITEHA +L F F + E S L W
Sbjct: 225 IERVIVKGLLEDENIDEVDLSENSSLDTMTRITEHAQASLIFYSFSSLTDEESFRKFLQW 284
Query: 220 ICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ SY+TLF C +C R L PP R + F P
Sbjct: 285 LRSYKTLFHAKCMRCKRHLVEG------YPPTWRDFVTFQP 319
>gi|313213674|emb|CBY40578.1| unnamed protein product [Oikopleura dioica]
Length = 327
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 162 IEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQF--FLGIRTETSLYFLLHW 219
IE V DE + + +S ITEHA +L F F + E S L W
Sbjct: 225 IERVIVKGLLEDENIDEVDLSENSSLDTMTRITEHAQASLIFYSFSSLTDEESFRKFLQW 284
Query: 220 ICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ SY+TLF C +C R L PP R + F P
Sbjct: 285 LRSYKTLFHAKCMRCKRHLVEG------YPPTWRDFVTFQP 319
>gi|307196089|gb|EFN77798.1| Mediator of RNA polymerase II transcription subunit 27
[Harpegnathos saltator]
Length = 303
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 226 SRYKVFRKVTENANAAMLHFYSPTLPELAVRSFMTWFHSLINLFSGTCKRCGL------H 279
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R +R P
Sbjct: 280 LHSALPPTWRDFRTLEP 296
>gi|296191057|ref|XP_002743461.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Callithrix jacchus]
Length = 207
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 130 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 187
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 188 ----LPPTWRDFR 196
>gi|195502057|ref|XP_002098057.1| GE10152 [Drosophila yakuba]
gi|194184158|gb|EDW97769.1| GE10152 [Drosophila yakuba]
Length = 293
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 98 KRASSLP-SSANESPL---ELLKEHNF--HSSSKL-RPGLQNTVAADKVSVIELLFPSIF 150
++ LP SS N P +LL E N H+S ++ RP N VA +S + + +F
Sbjct: 131 QKRQRLPFSSFNNDPDHIDKLLSEINTPPHTSYRIYRPFGTNAVAIVTISNV-MKAAIVF 189
Query: 151 RAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRT 209
+ ++ IE V F DE + S Y VFR + EHA +A L FF
Sbjct: 190 KGVL-------IEWVTVKGF--DEPLEHDDLWAESRYEVFRKVQEHAHSAMLHFFSPTLP 240
Query: 210 ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ ++ + W+ S+ LF + C +CG+ + LPP R R P
Sbjct: 241 DLAVKSYVTWLNSHIKLFLEPCKRCGKFVVHG------LPPTWRDLRTLEP 285
>gi|194898843|ref|XP_001978972.1| GG12980 [Drosophila erecta]
gi|190650675|gb|EDV47930.1| GG12980 [Drosophila erecta]
Length = 293
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 98 KRASSLP-SSANESPL---ELLKEHNF--HSSSKL-RPGLQNTVAADKVSVIELLFPSIF 150
++ LP SS N P +LL E N H+S ++ RP N VA +S + + +F
Sbjct: 131 QKRQRLPFSSFNNDPDHIDKLLSEINTPPHTSYRIFRPFGTNAVAIVTISNV-MKAAIVF 189
Query: 151 RAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRT 209
+ ++ IE V F DE + S Y VFR + EHA +A L FF
Sbjct: 190 KGVL-------IEWVTVKGF--DEPLEHDDLWAESRYEVFRKVQEHAHSAMLHFFSPTLP 240
Query: 210 ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ ++ + W+ S+ LF + C +CG+ + LPP R R P
Sbjct: 241 DLAVKSYVTWLNSHIKLFLEPCKRCGKFVVHG------LPPTWRDLRTLEP 285
>gi|41054936|ref|NP_956954.1| mediator of RNA polymerase II transcription subunit 27 [Danio
rerio]
gi|82187195|sp|Q6PFL0.1|MED27_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 8; Short=CRSP complex
subunit 8; AltName: Full=Mediator complex subunit 27
gi|35505528|gb|AAH57508.1| Cofactor required for Sp1 transcriptional activation, subunit 8
[Danio rerio]
gi|182891210|gb|AAI64095.1| Crsp8 protein [Danio rerio]
Length = 311
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y F+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 234 SNYQAFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQTPCQRCGKYLQEG-- 291
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 292 ----LPPTWRDFR 300
>gi|281348294|gb|EFB23878.1| hypothetical protein PANDA_020984 [Ailuropoda melanoleuca]
Length = 154
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 77 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDG-- 134
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 135 ----LPPTWRDFR 143
>gi|195395116|ref|XP_002056182.1| GJ10362 [Drosophila virilis]
gi|194142891|gb|EDW59294.1| GJ10362 [Drosophila virilis]
Length = 293
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 98 KRASSLP-SSANESPL---ELLKEHNF--HSSSKL-RPGLQNTVAADKVSVIELLFPSIF 150
++ LP SS N P +LL E N H+S K+ RP N VA +S + L +F
Sbjct: 131 QKRQRLPFSSFNNDPDHIDKLLSEINHPPHTSYKVFRPFGSNAVAIVTISNV-LKAAIVF 189
Query: 151 RAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRT 209
+ ++ IE V DE + S Y VFR + EHA +A L FF
Sbjct: 190 KGVL-------IE--WVTIKGYDETLEHDDLWAESRYEVFRKVQEHAHSAMLHFFSPTLP 240
Query: 210 ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ ++ + W+ S+ LF + C +C + +A LPP R R P
Sbjct: 241 DLAVKSYVTWLNSHIKLFLEPCKRCSKYIANG------LPPTWRDLRTLEP 285
>gi|431898935|gb|ELK07305.1| Mediator of RNA polymerase II transcription subunit 27 [Pteropus
alecto]
Length = 292
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C +CG+ L
Sbjct: 215 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCLRCGKFLQDG-- 272
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 273 ----LPPTWRDFR 281
>gi|119616255|gb|EAW95849.1| hCG1759547 [Homo sapiens]
Length = 172
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTAL-QFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ +T+HA TAL + L + + + W+ SY LF C CG+ L
Sbjct: 95 SNYQVFQKVTDHATTALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQHCGKFLQDG-- 152
Query: 244 LALLLPPVSRPYR 256
LPP R +R
Sbjct: 153 ----LPPTWRDFR 161
>gi|392569960|gb|EIW63133.1| hypothetical protein TRAVEDRAFT_62797 [Trametes versicolor
FP-101664 SS1]
Length = 302
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 29/151 (19%)
Query: 141 VIELLFPSIFRAIVSLHPVGTIEP----DAVAFFSPDEGGNYIHARGSSVYHVFRHITEH 196
V+ + P + ++L T E ++ F P E H++ S Y V+R +++
Sbjct: 174 VLRFVIPDVVAIYLTLERSATEEQALVVESATAFGPREQ-KATHSQ--SDYTVYRQLSQQ 230
Query: 197 AGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYR 256
LQ L ++ +C+Y+ LFS+ C CGR+L+++
Sbjct: 231 LARVLQS----EPWAPLQAIVSLLCAYENLFSEPCVVCGRVLSVEM-------------- 272
Query: 257 HFFPTVTSSAQLISSTNEQSSDVVNAYHIGC 287
H P+V ++ E S AYH+ C
Sbjct: 273 HTPPSV----RVRKEPGEDSPSEWGAYHVAC 299
>gi|195568517|ref|XP_002102260.1| GD19807 [Drosophila simulans]
gi|194198187|gb|EDX11763.1| GD19807 [Drosophila simulans]
Length = 293
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + +HA +A L FF + ++ + W+ S+ LF + C +CG+ +
Sbjct: 213 AESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWLNSHVKLFLEPCKRCGKFVVNG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|195343761|ref|XP_002038459.1| GM10829 [Drosophila sechellia]
gi|194133480|gb|EDW54996.1| GM10829 [Drosophila sechellia]
Length = 293
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + +HA +A L FF + ++ + W+ S+ LF + C +CG+ +
Sbjct: 213 AESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWLNSHVKLFLEPCKRCGKFVVNG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|389741665|gb|EIM82853.1| hypothetical protein STEHIDRAFT_171021 [Stereum hirsutum FP-91666
SS1]
Length = 525
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 185 SVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRL 244
S Y VF+ +++H +Q + +T L + SYQTLFS C+ C R+L+ +
Sbjct: 371 SEYLVFQRLSQHLLRMVQSTPRVPFQT----LATMMVSYQTLFSTHCTVCQRVLSSEG-- 424
Query: 245 ALLLPPVSRPYRH 257
+PPV+R +RH
Sbjct: 425 --YIPPVARIWRH 435
>gi|21357189|ref|NP_649569.1| mediator complex subunit 27 [Drosophila melanogaster]
gi|74870072|sp|Q9VNG0.1|MED27_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
27; AltName: Full=Mediator complex subunit 27; AltName:
Full=dCRSP34; AltName: Full=dMED27; AltName:
Full=dTRAP37
gi|7296697|gb|AAF51976.1| mediator complex subunit 27 [Drosophila melanogaster]
gi|18447495|gb|AAL68310.1| RE51713p [Drosophila melanogaster]
gi|220942438|gb|ACL83762.1| MED27-PA [synthetic construct]
gi|220955712|gb|ACL90399.1| MED27-PA [synthetic construct]
Length = 293
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + +HA +A L FF + ++ + W+ S+ LF + C +CG+ +
Sbjct: 213 AESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWLNSHVKLFLEPCKRCGKFVVNG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|409044559|gb|EKM54040.1| hypothetical protein PHACADRAFT_29309 [Phanerochaete carnosa
HHB-10118-sp]
Length = 341
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 148 SIFRAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTALQFFLGI 207
+++ + S+ P TI + F P E H++ S Y V++ +++H LQ
Sbjct: 223 TVYLTLGSMPPESTIVVEGATAFGPREK-KPPHSQSS--YVVYQRLSQHLAKMLQS---- 275
Query: 208 RTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSR 253
+ + S ++ + SY+ LF + CS C R+ + + LPP +R
Sbjct: 276 KPQASFQLVMVLLASYEDLFVRRCSACQRVTSAEGH----LPPAAR 317
>gi|220928306|ref|YP_002505215.1| beta-ketoacyl synthase [Clostridium cellulolyticum H10]
gi|219998634|gb|ACL75235.1| Beta-ketoacyl synthase [Clostridium cellulolyticum H10]
Length = 1440
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 34 PHLDDRVHDQSTEPESKKHCVPQALPASNQEELSDCKTLSDVLMRLEKEV---PNLKIFT 90
P LD + ++ EPE +KH + +P NQ E + +S +L E+++ NLKIF
Sbjct: 1282 PSLDSQKKVKTAEPEREKHFTDELIPFENQVESVLRQIISKLLKLPEEQIGVDENLKIFG 1341
Query: 91 YERLDWLKRASSLPSS-ANESPLELLKEHN 119
++ L +K A+ + ++ P++ L E N
Sbjct: 1342 FDSLSGMKLANIIQDYFGSKIPVKSLFEFN 1371
>gi|154413965|ref|XP_001580011.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121914224|gb|EAY19025.1| hypothetical protein TVAG_247040 [Trichomonas vaginalis G3]
Length = 208
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 198 GTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSR 253
G +F E +Y + W Y+ L +K C KCG L+ +D +PPV R
Sbjct: 124 GKVFDWFQDQYDEKGIYKFVQWAHYYKDLHTKSCKKCGELMIVDS-FGAFVPPVIR 178
>gi|195037453|ref|XP_001990175.1| GH18376 [Drosophila grimshawi]
gi|193894371|gb|EDV93237.1| GH18376 [Drosophila grimshawi]
Length = 293
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 98 KRASSLP-SSANESPL---ELLKEHNF--HSSSKL-RPGLQNTVAADKVSVIELLFPSIF 150
++ LP SS N P +LL E N H+S + RP N VA +S + L +F
Sbjct: 131 QKRQRLPFSSFNNDPDHIDKLLSEINHPPHTSYNVFRPFGSNAVAIVTISNV-LKAAIVF 189
Query: 151 RAIVSLHPVGTIEPDAVAFFSPDEGGNYIHARGSSVYHVFRHITEHAGTA-LQFFLGIRT 209
+ ++ + V DE + S Y VFR + EHA +A L FF
Sbjct: 190 KGVLI---------EWVTIKGYDETLEHDDLWAESRYEVFRKVQEHAHSAMLHFFSPTLP 240
Query: 210 ETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFP 260
+ ++ + W+ S+ LF + C +C + +A LPP R R P
Sbjct: 241 DLAVKSYVTWLNSHIKLFLEPCKRCNKYIANG------LPPTWRDLRTLEP 285
>gi|124804678|ref|XP_001348076.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496332|gb|AAN35989.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 629
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 30/172 (17%)
Query: 10 LQNSEREVFRLALKAFTDQKKRF-----FPHLDDR-VHDQSTEPESKKHC-VPQALPASN 62
++N + EV ++ K+ +D +K + F ++++ +++ + ESKK+ N
Sbjct: 238 MKNEKMEVASISFKSLSDDEKNYSFIQTFNDMNEKNINENVYKKESKKNIKYNNKQNDDN 297
Query: 63 QEELSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHS 122
Q++L + K LS + +K++ + E+L+ + + K +F
Sbjct: 298 QKKLQNYKELSTNFLLSQKDIKKGSVINNEKLE-------------KEKCKYKKNMSFVK 344
Query: 123 SSKLRPGL---QNTVAADKVSVIELLFPSIFRAIVSLHPVGTIEPDAVAFFS 171
++ LR QN + +K+ + FP+I H T E D + FFS
Sbjct: 345 NNMLRKNTMKKQNIIKINKLKMTNSTFPNI-------HLTNTQENDTIKFFS 389
>gi|195145840|ref|XP_002013898.1| GL24390 [Drosophila persimilis]
gi|198451731|ref|XP_002137350.1| GA26598 [Drosophila pseudoobscura pseudoobscura]
gi|194102841|gb|EDW24884.1| GL24390 [Drosophila persimilis]
gi|198131619|gb|EDY67908.1| GA26598 [Drosophila pseudoobscura pseudoobscura]
Length = 293
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 183 GSSVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMD 241
S Y VFR + EHA +A L FF + ++ + W+ S+ LF + C +C + +A
Sbjct: 213 AESRYEVFRKVQEHAHSAMLHFFSPTLPDLAVKSYVTWLNSHIKLFLEPCKRCSKYIANG 272
Query: 242 KRLALLLPPVSRPYRHFFP 260
LPP R R P
Sbjct: 273 ------LPPTWRDLRTLEP 285
>gi|225718194|gb|ACO14943.1| Mediator of RNA polymerase II transcription subunit 27 [Caligus
clemensi]
Length = 315
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTALQFFLG-IRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S Y VF+ ITE+A A+ F + E S+ + ++ SY +LF+ C KCG L +
Sbjct: 237 SRYQVFQKITENASAAMLHFQSPVFPEMSVKSFMTYLHSYVSLFTDKCRKCGLHLQNN-- 294
Query: 244 LALLLPPVSRPYR 256
+PP R ++
Sbjct: 295 ----IPPTWREFK 303
>gi|66564857|ref|XP_396939.2| PREDICTED: mediator of RNA polymerase II transcription subunit 27
[Apis mellifera]
Length = 298
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 221 SRHKVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWFYSLNNLFSDPCKRCGL------H 274
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R +R P
Sbjct: 275 LHSALPPTWRDFRTLEP 291
>gi|380018004|ref|XP_003692930.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Apis florea]
Length = 298
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 221 SRHKVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWFYSLNNLFSDPCKRCGL------H 274
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R +R P
Sbjct: 275 LHSALPPTWRDFRTLEP 291
>gi|383858299|ref|XP_003704639.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Megachile rotundata]
Length = 292
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 215 SRHKVFRKVTENAHAAMLHFYSPALPELAVRSFMTWFHSLNNLFSDPCKRCGL------H 268
Query: 244 LALLLPPVSRPYRHFFP 260
L LPP R +R P
Sbjct: 269 LHSALPPTWRDFRTLEP 285
>gi|332021555|gb|EGI61920.1| Mediator of RNA polymerase II transcription subunit 27 [Acromyrmex
echinatior]
Length = 292
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS+ C +CG L
Sbjct: 215 SRHKVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWFHSLINLFSEPCKRCGLYLHSA-- 272
Query: 244 LALLLPPVSRPYRHFFP 260
LPP R +R P
Sbjct: 273 ----LPPTWRDFRTLEP 285
>gi|340716827|ref|XP_003396894.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Bombus terrestris]
Length = 292
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 215 SRHKVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWFHSLNNLFSDPCKRCGL------H 268
Query: 244 LALLLPPVSRPYR 256
L LPP R +R
Sbjct: 269 LHSALPPTWRDFR 281
>gi|212536504|ref|XP_002148408.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210070807|gb|EEA24897.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 373
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 213 LYFLLHWICSYQTLFSKVCSKCGRLLAMDKRLALLLPPVSRPYRHFFPTVTSSAQLISST 272
L FLL I SY + S C KCG+L +L + PV+ + + S++
Sbjct: 302 LRFLLELILSYANIRSLPCKKCGQLTDSSAQLPIFRKPVAASSTNAASAAGDT----SAS 357
Query: 273 NEQSSDVVNAYHIGCF 288
+ V YH+GC
Sbjct: 358 GSEGGVVWEGYHLGCI 373
>gi|350402878|ref|XP_003486635.1| PREDICTED: mediator of RNA polymerase II transcription subunit
27-like [Bombus impatiens]
Length = 292
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 185 SVYHVFRHITEHAGTA-LQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 243
S + VFR +TE+A A L F+ E ++ + W S LFS C +CG
Sbjct: 215 SRHKVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWFHSLNNLFSDPCKRCGL------H 268
Query: 244 LALLLPPVSRPYR 256
L LPP R +R
Sbjct: 269 LHSALPPTWRDFR 281
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,381,343,244
Number of Sequences: 23463169
Number of extensions: 173766785
Number of successful extensions: 420517
Number of sequences better than 100.0: 148
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 420316
Number of HSP's gapped (non-prelim): 158
length of query: 293
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 152
effective length of database: 9,050,888,538
effective search space: 1375735057776
effective search space used: 1375735057776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)