Your job contains 1 sequence.
>022699
MALQRYCFHTCRNASSHKVYMTQSSNDRKESLQDVSARPGKSPAEEFAPLAAKFNRRLLV
GVGTASLVAVGANFGGVTSFLLGLSPESGRNLKLDVLYPIGGYSRCIDINEGFEFIYPDS
WVGDQTLLYRAAEKSEFERSLDPPPINKNVKSSNGRRQNINEPIVAFGPPGSTGELNVSV
IVSPVPPDFSIEAFGGPKEVGEAVVRTITGSGRRPDVKGSLIESNLREDSLRSIKYYELE
FRVESPSFQRHNIAVCCTRNGKLYTLNAQAPESVWPEVKSELYTVADSFSLTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022699
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079792 - symbol:AT3G05410 species:3702 "Arabi... 1002 4.9e-101 1
TAIR|locus:2100681 - symbol:PPL1 "PsbP-like protein 1" sp... 172 7.7e-13 1
TAIR|locus:2011711 - symbol:AT1G76450 species:3702 "Arabi... 114 0.00023 1
TAIR|locus:2039727 - symbol:PnsL1 "Photosynthetic NDH su... 95 0.00085 2
>TAIR|locus:2079792 [details] [associations]
symbol:AT3G05410 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0009523 "photosystem II"
evidence=IEA] [GO:0009654 "oxygen evolving complex" evidence=IEA]
[GO:0015979 "photosynthesis" evidence=IEA] [GO:0019898 "extrinsic
to membrane" evidence=IEA] InterPro:IPR002683 Pfam:PF01789
EMBL:CP002686 GO:GO:0019898 GO:GO:0005509 GO:GO:0015979
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 IPI:IPI00938794 RefSeq:NP_001154592.1
UniGene:At.40675 PRIDE:F4J7A7 EnsemblPlants:AT3G05410.2
GeneID:819705 KEGG:ath:AT3G05410 OMA:QAPESAW Uniprot:F4J7A7
Length = 280
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 187/252 (74%), Positives = 221/252 (87%)
Query: 42 SPAEEFAPLAAKFNRRLLVGVGTASLVAVGANFGGVTSFLLGLSPESGRNLKLDVLYPIG 101
+PAEEF+PL KFNRRLL+GVG++S++A+GANFGG TSF+LGLSP GRNLKLDV+YPIG
Sbjct: 35 TPAEEFSPLVEKFNRRLLLGVGSSSVLAIGANFGGTTSFILGLSPGIGRNLKLDVIYPIG 94
Query: 102 GYSRCIDINEGFEFIYPDSWVGDQTLLYRAAEKSEFERSLDPPPINKNVKSSNGRRQNIN 161
GYSRCID EGFEFIYP +WVGDQTLLYRAAEKSE E SLD PP + N RR+N+N
Sbjct: 95 GYSRCIDTVEGFEFIYPATWVGDQTLLYRAAEKSERENSLDLPP------ARNSRRKNVN 148
Query: 162 EPIVAFGPPGSTGELNVSVIVSPVPPDFSIEAFGGPKEVGEAVVRTITGSGRRPDVKGSL 221
EP+VAFGPPGSTGELNVSVIVSPV P FSIEAFGGPKEVGEA+VRT+TGSG+R D+KG+L
Sbjct: 149 EPVVAFGPPGSTGELNVSVIVSPVSPSFSIEAFGGPKEVGEAIVRTVTGSGQRADLKGTL 208
Query: 222 IESNLREDSLRSIKYYELEFRVESPSFQRHNIAVCCTRNGKLYTLNAQAPESVWPEVKSE 281
+ES++R+DS R++KYYELEF+VESP F+RHN+AVCC +G+LYTLNAQAPES W EVKSE
Sbjct: 209 LESSIRQDSERNLKYYELEFKVESPLFRRHNVAVCCAHSGRLYTLNAQAPESAWSEVKSE 268
Query: 282 LYTVADSFSLTS 293
+YT A SF++ S
Sbjct: 269 IYTTAKSFNIIS 280
>TAIR|locus:2100681 [details] [associations]
symbol:PPL1 "PsbP-like protein 1" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009657 "plastid organization"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=RCA] InterPro:IPR002683 Pfam:PF01789 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019898 GO:GO:0005509
EMBL:AL132954 GO:GO:0031977 GO:GO:0015979 GO:GO:0009543
Gene3D:3.40.1000.10 InterPro:IPR016123 SUPFAM:SSF55724
GO:GO:0009654 EMBL:AF419553 EMBL:AY097338 EMBL:AY087663
IPI:IPI00528004 PIR:PA0046 PIR:T47672 RefSeq:NP_191093.1
UniGene:At.27396 ProteinModelPortal:P82538 SMR:P82538 STRING:P82538
PaxDb:P82538 PRIDE:P82538 EnsemblPlants:AT3G55330.1 GeneID:824699
KEGG:ath:AT3G55330 TAIR:At3g55330 eggNOG:NOG08775
HOGENOM:HOG000232965 InParanoid:P82538 KO:K02717 OMA:GYEFLYP
PhylomeDB:P82538 ProtClustDB:CLSN2685283 Genevestigator:P82538
GermOnline:AT3G55330 Uniprot:P82538
Length = 230
Score = 172 (65.6 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 39/115 (33%), Positives = 64/115 (55%)
Query: 179 SVIVSPVPPDF-SIEAFGGPKEVGEAVVRTITGSGRRPDVKGSLIESNLREDSLRSIKYY 237
SV V+ VP +I+ FG PK++ E +++ + P+ K +LI+++ E + YY
Sbjct: 120 SVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAP---PNQKTTLIDAS--EHDVDGKTYY 174
Query: 238 ELEFRVESPSFQRHNIAVCCTRNGKLYTLNAQAPESVWPEVKSELYTVADSFSLT 292
+ EF V++ ++ RH + NG YTL A E W ++K L+TV DSF +T
Sbjct: 175 QFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKIT 229
>TAIR|locus:2011711 [details] [associations]
symbol:AT1G76450 species:3702 "Arabidopsis thaliana"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0015979 "photosynthesis"
evidence=IEA;RCA] [GO:0009543 "chloroplast thylakoid lumen"
evidence=IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010114 "response to red
light" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
InterPro:IPR002683 Pfam:PF01789 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0019898 GO:GO:0005509 EMBL:AC012394
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 EMBL:AC015450
GO:GO:0009543 Gene3D:3.40.1000.10 InterPro:IPR016123
SUPFAM:SSF55724 GO:GO:0009654 EMBL:BT009723 EMBL:AY084993
EMBL:AK227301 IPI:IPI00538962 RefSeq:NP_565131.1 UniGene:At.43912
UniGene:At.70089 ProteinModelPortal:Q9S720 STRING:Q9S720
PaxDb:Q9S720 PRIDE:Q9S720 EnsemblPlants:AT1G76450.1 GeneID:843978
KEGG:ath:AT1G76450 TAIR:At1g76450 eggNOG:NOG271581
HOGENOM:HOG000029524 InParanoid:Q9S720 OMA:AKLIDSR PhylomeDB:Q9S720
ProtClustDB:CLSN2917457 BioCyc:MetaCyc:AT1G76450-MONOMER
Genevestigator:Q9S720 GermOnline:AT1G76450 Uniprot:Q9S720
Length = 247
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 133 EKSEFERSLDPPPINKNVKSSNGRRQNINEPIVAFGPPGSTGELNVSVIVSPVPPDFS-I 191
E ++FE S+ P NG + I AF P T NVS+ ++ + PDF+ +
Sbjct: 94 ETNKFEISI-PQDWQVGQAEPNGFKS-----ITAFYPQ-ETSTSNVSIAITGLGPDFTRM 146
Query: 192 EAFGGPKEVGEAVVRTITGSGRRP-DVKGSLIESNLREDSLRSIKYYELEFRVESPSFQR 250
E+FG + E +V + S ++P V LI DS S +Y +E+ +++P R
Sbjct: 147 ESFGKVEAFAETLVSGLDRSWQKPVGVTAKLI------DSRASKGFYYIEYTLQNPGEAR 200
Query: 251 HNI--AVCCTRNG---KLYTLNAQAPESVWPEVKSELYTVADSF 289
++ A+ NG +LYT+ Q + E S++ SF
Sbjct: 201 KHLYSAIGMATNGWYNRLYTVTGQFTDEESAEQSSKIQKTVKSF 244
>TAIR|locus:2039727 [details] [associations]
symbol:PnsL1 "Photosynthetic NDH subcomplex L 1"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0016556 "mRNA modification" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] InterPro:IPR002683 Pfam:PF01789
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0019898 GO:GO:0005509
EMBL:AC004218 UniGene:At.37167 UniGene:At.63501 GO:GO:0009535
GO:GO:0015979 GO:GO:0009543 Gene3D:3.40.1000.10 InterPro:IPR016123
SUPFAM:SSF55724 GO:GO:0009654 HOGENOM:HOG000232965 EMBL:AY039968
EMBL:AY133798 EMBL:AY085632 IPI:IPI00518089 IPI:IPI00656679
IPI:IPI00846788 PIR:T00557 RefSeq:NP_001031514.2
RefSeq:NP_001078022.1 RefSeq:NP_565906.1 ProteinModelPortal:O80634
SMR:O80634 STRING:O80634 PaxDb:O80634 PRIDE:O80634
EnsemblPlants:AT2G39470.1 GeneID:818532 KEGG:ath:AT2G39470
TAIR:At2g39470 eggNOG:NOG283132 InParanoid:Q94BP9 OMA:YAAPNQI
PhylomeDB:O80634 ProtClustDB:CLSN2688805 Genevestigator:O80634
Uniprot:O80634
Length = 238
Score = 95 (38.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 196 GPKEVGEAVVRTITGSGRRPDVKGSLIESNLREDSLRSIKYYELEFRVESPSFQRHNIAV 255
GP E E V + P+ ++ + R + ++ YY E+ + +P + + A
Sbjct: 144 GPME--EVVYDLVKHKFAAPNQVATIYDMKERVEDGKN--YYTFEYGLRTPIYATTSFAT 199
Query: 256 CCTRNGKLYTLNAQAPESVWPEVKSELYTVADSFSL 291
N + YTL A E W +VK +L VADS +
Sbjct: 200 VAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKI 235
Score = 51 (23.0 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 103 YSRCIDINEGFEFIYPDSW 121
YS +D +G+ + YP W
Sbjct: 88 YSPFVDREDGYSYYYPSDW 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 22 0.43 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 599 (64 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.17u 0.11s 26.28t Elapsed: 00:00:01
Total cpu time: 26.17u 0.11s 26.28t Elapsed: 00:00:01
Start: Mon May 20 15:47:27 2013 End: Mon May 20 15:47:28 2013