Query 022700
Match_columns 293
No_of_seqs 294 out of 2455
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 05:31:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022700.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022700hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1552 Predicted alpha/beta h 100.0 1.2E-35 2.6E-40 229.1 21.6 252 1-263 1-255 (258)
2 KOG4391 Predicted alpha/beta h 100.0 3.5E-29 7.5E-34 186.7 14.8 225 39-263 50-285 (300)
3 PHA02857 monoglyceride lipase; 100.0 6.3E-28 1.4E-32 199.1 23.4 211 47-260 4-273 (276)
4 PLN02385 hydrolase; alpha/beta 100.0 5E-28 1.1E-32 205.9 22.4 219 42-261 60-346 (349)
5 PLN02298 hydrolase, alpha/beta 100.0 8E-28 1.7E-32 203.4 21.8 221 41-262 30-319 (330)
6 PRK13604 luxD acyl transferase 100.0 4.8E-27 1E-31 190.2 22.0 211 44-263 10-262 (307)
7 KOG1455 Lysophospholipase [Lip 100.0 2.7E-27 5.8E-32 186.5 18.5 217 42-259 26-311 (313)
8 PRK10749 lysophospholipase L2; 100.0 5.7E-27 1.2E-31 197.7 20.4 213 44-259 31-328 (330)
9 TIGR02240 PHA_depoly_arom poly 100.0 2.8E-26 6.1E-31 189.2 22.1 206 51-263 9-269 (276)
10 PRK00870 haloalkane dehalogena 99.9 1.5E-25 3.2E-30 187.3 21.5 210 46-259 24-300 (302)
11 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.4E-25 5.3E-30 184.2 22.5 190 65-258 28-281 (282)
12 PLN02824 hydrolase, alpha/beta 99.9 1.5E-25 3.2E-30 186.6 20.9 201 52-259 16-293 (294)
13 PRK03592 haloalkane dehalogena 99.9 5.1E-25 1.1E-29 183.4 22.3 204 51-262 14-291 (295)
14 PLN02965 Probable pheophorbida 99.9 2.2E-25 4.7E-30 181.7 19.5 191 68-261 4-254 (255)
15 PLN02652 hydrolase; alpha/beta 99.9 1.1E-24 2.3E-29 186.4 23.2 216 43-262 110-389 (395)
16 PRK05077 frsA fermentation/res 99.9 1.2E-24 2.6E-29 187.5 23.3 217 40-260 165-412 (414)
17 TIGR03611 RutD pyrimidine util 99.9 4E-25 8.6E-30 180.0 19.2 189 65-258 11-256 (257)
18 TIGR03056 bchO_mg_che_rel puta 99.9 1.1E-24 2.3E-29 179.9 21.1 203 50-258 12-278 (278)
19 COG2267 PldB Lysophospholipase 99.9 1.4E-24 3E-29 179.0 21.5 219 42-261 8-295 (298)
20 TIGR01250 pro_imino_pep_2 prol 99.9 2.6E-24 5.5E-29 178.0 21.8 204 51-258 9-288 (288)
21 PRK03204 haloalkane dehalogena 99.9 3.1E-24 6.7E-29 177.6 22.2 208 41-257 12-285 (286)
22 PLN03087 BODYGUARD 1 domain co 99.9 3.6E-24 7.8E-29 185.6 22.6 210 47-259 179-478 (481)
23 KOG4178 Soluble epoxide hydrol 99.9 3.8E-24 8.2E-29 171.4 20.5 210 48-261 26-321 (322)
24 PLN02679 hydrolase, alpha/beta 99.9 3.7E-24 8.1E-29 182.5 21.3 204 52-260 69-357 (360)
25 PRK10566 esterase; Provisional 99.9 5.1E-24 1.1E-28 173.1 20.5 191 66-260 26-248 (249)
26 PRK06489 hypothetical protein; 99.9 6.7E-24 1.5E-28 181.2 20.4 208 51-262 47-359 (360)
27 TIGR02427 protocat_pcaD 3-oxoa 99.9 4.5E-24 9.8E-29 172.8 17.5 195 58-258 4-251 (251)
28 KOG1454 Predicted hydrolase/ac 99.9 1.1E-23 2.3E-28 175.4 19.5 216 42-260 24-324 (326)
29 PRK10673 acyl-CoA esterase; Pr 99.9 1.1E-23 2.3E-28 171.9 18.9 188 65-259 14-254 (255)
30 PRK10349 carboxylesterase BioH 99.9 1.3E-23 2.8E-28 171.5 18.6 180 68-258 14-254 (256)
31 KOG4409 Predicted hydrolase/ac 99.9 3.1E-23 6.8E-28 166.7 20.1 212 43-259 65-363 (365)
32 COG1647 Esterase/lipase [Gener 99.9 9.8E-24 2.1E-28 158.6 14.9 188 66-258 14-242 (243)
33 PLN02578 hydrolase 99.9 6E-23 1.3E-27 174.9 21.8 199 50-258 72-353 (354)
34 PLN02511 hydrolase 99.9 6.5E-23 1.4E-27 176.1 21.4 219 41-263 69-368 (388)
35 PLN02894 hydrolase, alpha/beta 99.9 1.7E-22 3.7E-27 174.2 22.9 204 55-263 93-388 (402)
36 TIGR01607 PST-A Plasmodium sub 99.9 1.5E-22 3.1E-27 170.6 21.0 210 48-258 2-331 (332)
37 COG1506 DAP2 Dipeptidyl aminop 99.9 6.8E-23 1.5E-27 185.5 20.1 223 39-262 361-618 (620)
38 PF12695 Abhydrolase_5: Alpha/ 99.9 8.4E-23 1.8E-27 152.0 16.8 145 69-241 1-145 (145)
39 PRK11126 2-succinyl-6-hydroxy- 99.9 1.2E-22 2.5E-27 164.5 18.1 179 67-259 2-241 (242)
40 TIGR01738 bioH putative pimelo 99.9 1E-22 2.2E-27 164.3 17.7 180 67-257 4-245 (245)
41 PLN02211 methyl indole-3-aceta 99.9 2.5E-22 5.4E-27 164.8 20.0 202 52-259 5-269 (273)
42 PLN03084 alpha/beta hydrolase 99.9 3.2E-22 7E-27 170.2 21.2 202 50-258 111-382 (383)
43 TIGR03695 menH_SHCHC 2-succiny 99.9 1.7E-22 3.6E-27 163.4 18.0 185 67-257 1-250 (251)
44 PRK07581 hypothetical protein; 99.9 1.4E-22 3E-27 172.0 18.2 207 52-262 24-338 (339)
45 TIGR01249 pro_imino_pep_1 prol 99.9 6.9E-22 1.5E-26 165.3 21.0 209 44-260 5-305 (306)
46 PRK10985 putative hydrolase; P 99.9 1.2E-21 2.7E-26 164.8 22.1 214 44-261 32-321 (324)
47 PRK14875 acetoin dehydrogenase 99.9 4.3E-22 9.4E-27 171.2 18.4 198 52-259 117-370 (371)
48 PF12697 Abhydrolase_6: Alpha/ 99.9 1.3E-22 2.8E-27 161.7 13.7 174 70-248 1-223 (228)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 1.8E-21 3.9E-26 159.9 20.3 208 46-258 5-273 (274)
50 TIGR01392 homoserO_Ac_trn homo 99.9 5.7E-22 1.2E-26 168.8 16.8 204 51-258 13-351 (351)
51 PRK08775 homoserine O-acetyltr 99.9 7.7E-22 1.7E-26 167.5 15.5 202 52-261 44-340 (343)
52 PRK00175 metX homoserine O-ace 99.9 2.9E-21 6.3E-26 165.8 18.5 208 52-262 31-376 (379)
53 PRK11071 esterase YqiA; Provis 99.9 5.1E-21 1.1E-25 148.1 15.6 169 68-258 2-189 (190)
54 PF05448 AXE1: Acetyl xylan es 99.9 1.4E-20 3.1E-25 156.0 18.3 216 39-259 52-319 (320)
55 PLN02872 triacylglycerol lipas 99.9 1.5E-20 3.2E-25 160.4 16.4 219 39-261 40-390 (395)
56 PLN02980 2-oxoglutarate decarb 99.9 6.2E-20 1.3E-24 180.9 22.7 192 66-262 1370-1641(1655)
57 PF00326 Peptidase_S9: Prolyl 99.9 1E-20 2.2E-25 150.1 13.8 175 88-262 7-211 (213)
58 COG2945 Predicted hydrolase of 99.9 5.8E-20 1.3E-24 135.4 16.0 196 43-258 4-205 (210)
59 PRK05855 short chain dehydroge 99.8 5.9E-20 1.3E-24 167.1 17.2 209 48-262 7-294 (582)
60 PRK11460 putative hydrolase; P 99.8 2.8E-19 6.1E-24 143.0 18.2 175 65-261 14-209 (232)
61 PF01738 DLH: Dienelactone hyd 99.8 2.1E-19 4.6E-24 142.9 16.4 188 57-260 2-217 (218)
62 PF06500 DUF1100: Alpha/beta h 99.8 8.3E-19 1.8E-23 146.7 17.4 217 39-260 161-409 (411)
63 COG3458 Acetyl esterase (deace 99.8 1E-18 2.2E-23 135.4 14.1 216 41-261 54-318 (321)
64 PRK10115 protease 2; Provision 99.8 9.2E-18 2E-22 153.2 22.1 222 40-262 413-677 (686)
65 COG0429 Predicted hydrolase of 99.8 8.6E-18 1.9E-22 134.8 18.9 218 43-262 49-342 (345)
66 TIGR02821 fghA_ester_D S-formy 99.8 1.1E-17 2.5E-22 137.5 20.1 202 43-244 13-259 (275)
67 KOG2984 Predicted hydrolase [G 99.8 2.7E-19 5.8E-24 132.7 9.2 203 52-260 29-276 (277)
68 TIGR01836 PHA_synth_III_C poly 99.8 1.5E-18 3.2E-23 147.8 15.2 189 67-259 62-349 (350)
69 TIGR01840 esterase_phb esteras 99.8 3.1E-18 6.8E-23 135.5 15.1 164 65-228 11-196 (212)
70 COG0412 Dienelactone hydrolase 99.8 2.7E-17 5.9E-22 131.1 20.4 199 45-261 4-234 (236)
71 PLN02442 S-formylglutathione h 99.8 2.7E-17 5.8E-22 135.6 20.7 203 41-243 16-264 (283)
72 KOG2564 Predicted acetyltransf 99.8 1E-17 2.3E-22 130.4 14.6 208 46-261 53-328 (343)
73 PRK10162 acetyl esterase; Prov 99.8 5.8E-17 1.2E-21 135.8 20.3 213 42-261 56-316 (318)
74 KOG4667 Predicted esterase [Li 99.8 5E-17 1.1E-21 121.9 17.0 208 46-258 13-256 (269)
75 TIGR03101 hydr2_PEP hydrolase, 99.8 1.4E-17 3E-22 134.5 14.8 127 46-177 3-139 (266)
76 PLN00021 chlorophyllase 99.8 3.7E-17 7.9E-22 135.6 17.3 179 55-243 38-242 (313)
77 PF00561 Abhydrolase_1: alpha/ 99.8 6.1E-18 1.3E-22 135.4 11.5 155 96-253 1-228 (230)
78 PF02230 Abhydrolase_2: Phosph 99.8 1.1E-16 2.4E-21 126.9 18.1 181 62-260 9-215 (216)
79 KOG1838 Alpha/beta hydrolase [ 99.8 2.7E-16 5.8E-21 130.8 20.1 222 39-263 89-391 (409)
80 TIGR01838 PHA_synth_I poly(R)- 99.7 6.4E-17 1.4E-21 142.0 16.9 185 55-243 173-457 (532)
81 KOG2382 Predicted alpha/beta h 99.7 4.9E-17 1.1E-21 130.8 14.6 193 65-260 50-313 (315)
82 PF06342 DUF1057: Alpha/beta h 99.7 9.5E-16 2.1E-20 120.7 19.5 160 66-228 34-240 (297)
83 PRK06765 homoserine O-acetyltr 99.7 5E-16 1.1E-20 132.7 17.6 205 53-259 40-387 (389)
84 KOG3043 Predicted hydrolase re 99.7 2.5E-15 5.5E-20 113.7 14.7 185 56-261 28-241 (242)
85 COG3208 GrsT Predicted thioest 99.7 3.5E-15 7.5E-20 115.3 15.0 188 64-259 4-235 (244)
86 KOG2100 Dipeptidyl aminopeptid 99.7 8.8E-15 1.9E-19 134.3 18.5 216 44-261 499-748 (755)
87 COG0400 Predicted esterase [Ge 99.7 5.4E-15 1.2E-19 114.3 14.6 174 65-260 16-205 (207)
88 TIGR00976 /NonD putative hydro 99.6 1.1E-14 2.4E-19 131.0 17.7 124 49-173 2-133 (550)
89 PF06821 Ser_hydrolase: Serine 99.6 4.1E-15 9E-20 112.4 12.7 152 70-244 1-156 (171)
90 PRK07868 acyl-CoA synthetase; 99.6 1.9E-14 4.1E-19 137.8 17.7 193 66-263 66-364 (994)
91 PF02273 Acyl_transf_2: Acyl t 99.6 5.8E-14 1.3E-18 107.8 16.5 208 46-262 5-254 (294)
92 PF12715 Abhydrolase_7: Abhydr 99.6 4.7E-15 1E-19 122.3 11.0 196 38-236 83-342 (390)
93 PF02129 Peptidase_S15: X-Pro 99.6 3E-14 6.5E-19 117.1 15.7 187 52-241 1-271 (272)
94 COG0596 MhpC Predicted hydrola 99.6 2E-13 4.4E-18 110.7 20.3 186 67-257 21-279 (282)
95 KOG2281 Dipeptidyl aminopeptid 99.6 1.3E-13 2.9E-18 118.8 18.3 214 44-259 614-866 (867)
96 KOG2624 Triglyceride lipase-ch 99.6 8.2E-14 1.8E-18 117.7 16.4 221 39-261 44-399 (403)
97 PF12740 Chlorophyllase2: Chlo 99.6 1.3E-13 2.8E-18 109.2 16.2 173 64-246 14-210 (259)
98 PF10503 Esterase_phd: Esteras 99.6 1.1E-13 2.4E-18 108.2 15.1 160 66-227 15-196 (220)
99 COG4757 Predicted alpha/beta h 99.6 9.4E-14 2E-18 105.7 13.5 209 46-257 8-280 (281)
100 KOG1515 Arylacetamide deacetyl 99.5 1.3E-12 2.9E-17 108.2 19.6 210 45-260 63-335 (336)
101 PF07859 Abhydrolase_3: alpha/ 99.5 4.3E-14 9.3E-19 111.9 10.1 166 70-242 1-209 (211)
102 COG0657 Aes Esterase/lipase [L 99.5 1.8E-12 3.9E-17 108.8 20.1 201 50-258 58-308 (312)
103 KOG1553 Predicted alpha/beta h 99.5 7.4E-14 1.6E-18 112.1 9.7 175 40-217 211-400 (517)
104 COG4099 Predicted peptidase [G 99.5 4.2E-13 9.2E-18 105.8 13.6 161 49-228 167-343 (387)
105 PRK05371 x-prolyl-dipeptidyl a 99.5 1.1E-12 2.4E-17 121.0 18.3 175 87-262 271-521 (767)
106 TIGR03230 lipo_lipase lipoprot 99.5 2.3E-13 4.9E-18 116.6 12.2 108 66-173 40-155 (442)
107 cd00707 Pancreat_lipase_like P 99.5 7.4E-14 1.6E-18 114.3 8.8 108 65-173 34-148 (275)
108 KOG4627 Kynurenine formamidase 99.5 2.4E-13 5.2E-18 101.5 10.5 180 59-244 59-250 (270)
109 PF05728 UPF0227: Uncharacteri 99.5 2.4E-12 5.3E-17 98.4 16.0 167 70-257 2-186 (187)
110 TIGR01839 PHA_synth_II poly(R) 99.5 1.3E-12 2.9E-17 113.9 14.3 183 55-241 200-481 (560)
111 COG3571 Predicted hydrolase of 99.5 8.3E-12 1.8E-16 89.7 15.4 166 62-242 8-182 (213)
112 COG2021 MET2 Homoserine acetyl 99.5 5.5E-12 1.2E-16 103.4 16.3 205 53-259 35-367 (368)
113 KOG2551 Phospholipase/carboxyh 99.5 4.4E-12 9.5E-17 96.4 14.6 182 66-263 4-223 (230)
114 PF08840 BAAT_C: BAAT / Acyl-C 99.5 1.4E-12 3E-17 102.8 12.5 123 120-242 4-163 (213)
115 PF07224 Chlorophyllase: Chlor 99.5 2.3E-12 4.9E-17 100.2 13.3 169 65-245 44-234 (307)
116 PF06028 DUF915: Alpha/beta hy 99.5 8.3E-13 1.8E-17 105.7 11.2 190 66-257 10-252 (255)
117 PF12146 Hydrolase_4: Putative 99.4 8.6E-13 1.9E-17 86.1 9.0 75 53-128 1-76 (79)
118 COG3545 Predicted esterase of 99.4 1.3E-11 2.8E-16 90.5 15.0 171 68-260 3-179 (181)
119 PF03959 FSH1: Serine hydrolas 99.4 1.3E-12 2.8E-17 103.1 10.7 167 66-245 3-205 (212)
120 PF06057 VirJ: Bacterial virul 99.4 9.7E-12 2.1E-16 93.3 14.5 176 68-258 3-190 (192)
121 PF08538 DUF1749: Protein of u 99.4 1.1E-11 2.4E-16 100.1 14.8 193 66-258 32-303 (303)
122 KOG2112 Lysophospholipase [Lip 99.4 1.4E-11 3E-16 93.1 12.6 177 67-259 3-203 (206)
123 PF09752 DUF2048: Uncharacteri 99.4 5.4E-11 1.2E-15 97.6 16.8 187 66-258 91-347 (348)
124 COG3509 LpqC Poly(3-hydroxybut 99.4 1.1E-10 2.5E-15 92.7 16.8 121 52-172 43-179 (312)
125 PF00975 Thioesterase: Thioest 99.3 2E-11 4.3E-16 97.8 12.8 184 68-257 1-229 (229)
126 PF10230 DUF2305: Uncharacteri 99.3 1.5E-10 3.3E-15 94.3 17.7 106 67-172 2-122 (266)
127 PF05677 DUF818: Chlamydia CHL 99.3 1E-10 2.2E-15 94.9 15.7 168 42-210 111-300 (365)
128 PF03403 PAF-AH_p_II: Platelet 99.3 8E-11 1.7E-15 100.4 14.6 159 65-242 98-316 (379)
129 TIGR03502 lipase_Pla1_cef extr 99.3 2.2E-11 4.7E-16 110.8 11.7 111 47-158 421-575 (792)
130 COG1505 Serine proteases of th 99.2 3E-10 6.5E-15 98.1 14.7 222 38-260 389-646 (648)
131 COG4188 Predicted dienelactone 99.2 9.6E-11 2.1E-15 96.4 10.8 179 66-246 70-299 (365)
132 TIGR01849 PHB_depoly_PhaZ poly 99.2 8.5E-10 1.8E-14 93.8 16.7 186 68-259 103-405 (406)
133 PF07819 PGAP1: PGAP1-like pro 99.2 3E-10 6.4E-15 90.1 12.1 109 66-174 3-125 (225)
134 PF03096 Ndr: Ndr family; Int 99.2 1.2E-09 2.7E-14 87.5 14.7 206 47-259 3-278 (283)
135 COG2936 Predicted acyl esteras 99.2 1.3E-09 2.8E-14 95.2 14.6 130 43-173 19-160 (563)
136 KOG2931 Differentiation-relate 99.1 1.7E-08 3.7E-13 80.1 18.8 212 43-261 22-307 (326)
137 COG4814 Uncharacterized protei 99.1 7.6E-09 1.7E-13 80.3 15.5 186 68-259 46-286 (288)
138 KOG2237 Predicted serine prote 99.1 1.7E-09 3.8E-14 94.1 13.0 222 40-262 438-707 (712)
139 PRK04940 hypothetical protein; 99.1 3.2E-09 6.9E-14 79.7 12.8 112 138-258 60-178 (180)
140 COG1770 PtrB Protease II [Amin 99.1 1.1E-08 2.5E-13 89.6 17.7 212 40-252 416-667 (682)
141 COG3243 PhaC Poly(3-hydroxyalk 99.1 1.2E-09 2.6E-14 91.1 10.0 193 67-262 107-401 (445)
142 KOG3847 Phospholipase A2 (plat 99.0 1E-08 2.2E-13 82.0 12.8 158 66-242 117-329 (399)
143 PF03583 LIP: Secretory lipase 99.0 1.5E-08 3.3E-13 83.6 14.2 62 200-263 219-284 (290)
144 PRK10439 enterobactin/ferric e 99.0 2.8E-08 6.1E-13 85.8 16.0 209 44-260 181-406 (411)
145 KOG2565 Predicted hydrolases o 98.9 3E-08 6.5E-13 81.2 13.3 112 52-165 132-257 (469)
146 PF00151 Lipase: Lipase; Inte 98.9 2.8E-09 6E-14 89.2 7.3 108 66-174 70-189 (331)
147 PF05990 DUF900: Alpha/beta hy 98.9 2.5E-08 5.5E-13 79.6 12.4 180 65-258 16-231 (233)
148 PF00756 Esterase: Putative es 98.9 1.9E-08 4.1E-13 81.8 11.7 148 66-213 23-196 (251)
149 KOG3101 Esterase D [General fu 98.9 2E-08 4.3E-13 75.9 10.4 177 67-243 44-263 (283)
150 KOG3253 Predicted alpha/beta h 98.9 5.4E-08 1.2E-12 84.3 14.0 161 66-242 175-346 (784)
151 KOG3975 Uncharacterized conser 98.9 6E-07 1.3E-11 69.8 17.8 190 65-256 27-299 (301)
152 PF10340 DUF2424: Protein of u 98.8 4.1E-07 8.9E-12 76.3 16.0 106 66-175 121-238 (374)
153 PF12048 DUF3530: Protein of u 98.8 2.2E-06 4.7E-11 71.5 19.8 199 46-260 65-309 (310)
154 PRK10252 entF enterobactin syn 98.8 1.5E-07 3.2E-12 93.9 14.7 186 65-259 1066-1292(1296)
155 COG1073 Hydrolases of the alph 98.7 7.5E-09 1.6E-13 86.0 4.0 194 67-260 88-297 (299)
156 PLN02733 phosphatidylcholine-s 98.6 1.4E-07 3E-12 81.8 8.3 93 78-174 105-203 (440)
157 PF11339 DUF3141: Protein of u 98.6 3.7E-06 8E-11 72.4 15.6 71 92-169 97-172 (581)
158 PF10142 PhoPQ_related: PhoPQ- 98.6 9.3E-07 2E-11 74.4 11.9 133 129-263 163-323 (367)
159 PF01674 Lipase_2: Lipase (cla 98.6 4.8E-08 1E-12 76.5 3.9 88 68-159 2-96 (219)
160 PF11144 DUF2920: Protein of u 98.6 2.5E-05 5.4E-10 65.9 19.7 216 46-261 12-369 (403)
161 COG3319 Thioesterase domains o 98.6 5.5E-07 1.2E-11 72.2 9.3 100 68-173 1-104 (257)
162 cd00312 Esterase_lipase Estera 98.5 3.9E-07 8.6E-12 81.5 8.8 105 65-171 93-212 (493)
163 COG3946 VirJ Type IV secretory 98.5 2.4E-06 5.3E-11 71.1 11.5 176 65-257 258-446 (456)
164 KOG4840 Predicted hydrolases o 98.4 1.6E-05 3.4E-10 61.0 13.9 107 66-174 35-146 (299)
165 KOG1551 Uncharacterized conser 98.4 2.7E-06 5.9E-11 66.8 9.6 200 60-263 106-369 (371)
166 PF05705 DUF829: Eukaryotic pr 98.4 1.3E-05 2.9E-10 64.6 13.7 185 70-257 2-240 (240)
167 PF00135 COesterase: Carboxyle 98.4 1.8E-06 3.9E-11 78.1 9.5 104 67-170 125-243 (535)
168 COG2272 PnbA Carboxylesterase 98.4 3.9E-06 8.5E-11 72.0 10.5 116 56-172 80-217 (491)
169 COG0627 Predicted esterase [Ge 98.4 6.8E-06 1.5E-10 68.2 11.6 193 66-259 53-310 (316)
170 COG3150 Predicted esterase [Ge 98.3 1.7E-05 3.6E-10 58.1 11.7 170 70-258 2-187 (191)
171 COG4782 Uncharacterized protei 98.3 4.5E-06 9.9E-11 68.8 9.6 106 66-173 115-235 (377)
172 PF05057 DUF676: Putative seri 98.3 2.4E-06 5.3E-11 67.6 7.8 92 66-158 3-98 (217)
173 smart00824 PKS_TE Thioesterase 98.3 6.4E-06 1.4E-10 64.6 9.9 92 72-170 2-100 (212)
174 PTZ00472 serine carboxypeptida 98.3 4.1E-05 8.9E-10 67.5 14.6 122 53-174 60-218 (462)
175 COG2819 Predicted hydrolase of 98.2 0.00023 5.1E-09 56.8 17.2 47 127-173 126-173 (264)
176 PF05577 Peptidase_S28: Serine 98.2 1.6E-05 3.4E-10 70.1 11.9 108 66-173 28-149 (434)
177 KOG3724 Negative regulator of 98.2 2.5E-05 5.3E-10 70.4 11.1 100 66-170 88-218 (973)
178 COG2382 Fes Enterochelin ester 98.1 5E-05 1.1E-09 61.4 11.4 108 66-173 97-213 (299)
179 COG1075 LipA Predicted acetylt 98.1 1.7E-05 3.8E-10 67.0 7.9 101 67-173 59-165 (336)
180 KOG2183 Prolylcarboxypeptidase 98.0 7.8E-05 1.7E-09 62.5 10.2 104 68-171 81-202 (492)
181 PF02089 Palm_thioest: Palmito 98.0 4.3E-05 9.4E-10 61.7 8.3 101 66-170 4-114 (279)
182 PF07082 DUF1350: Protein of u 97.9 0.0018 3.9E-08 51.3 16.4 103 60-169 10-122 (250)
183 PF07519 Tannase: Tannase and 97.9 0.0017 3.7E-08 57.6 18.2 115 55-170 16-148 (474)
184 PF08386 Abhydrolase_4: TAP-li 97.9 5.7E-05 1.2E-09 52.1 6.5 59 200-259 34-93 (103)
185 KOG2541 Palmitoyl protein thio 97.9 0.00025 5.4E-09 56.2 10.6 99 68-170 24-126 (296)
186 PF04083 Abhydro_lipase: Parti 97.8 7.2E-05 1.6E-09 46.1 5.2 45 39-83 8-59 (63)
187 PF00450 Peptidase_S10: Serine 97.7 0.0003 6.5E-09 61.6 10.6 122 52-173 22-182 (415)
188 PF04301 DUF452: Protein of un 97.7 0.00037 8.1E-09 54.3 8.8 80 65-170 9-88 (213)
189 PLN02606 palmitoyl-protein thi 97.6 0.00067 1.5E-08 55.4 10.1 100 66-171 25-131 (306)
190 TIGR03712 acc_sec_asp2 accesso 97.6 0.0077 1.7E-07 52.2 16.2 120 49-173 271-391 (511)
191 PF02450 LCAT: Lecithin:choles 97.5 0.00047 1E-08 59.7 8.5 83 82-173 66-161 (389)
192 PLN02633 palmitoyl protein thi 97.4 0.0022 4.8E-08 52.5 10.2 102 65-171 23-130 (314)
193 KOG1516 Carboxylesterase and r 97.4 0.0018 4E-08 58.9 10.4 92 67-158 112-215 (545)
194 KOG2182 Hydrolytic enzymes of 97.3 0.0022 4.8E-08 55.5 9.7 106 65-170 84-205 (514)
195 KOG3967 Uncharacterized conser 97.3 0.0036 7.8E-08 48.0 9.6 102 65-169 99-224 (297)
196 KOG2521 Uncharacterized conser 97.2 0.029 6.3E-07 47.2 14.7 198 66-263 37-293 (350)
197 cd00741 Lipase Lipase. Lipase 97.1 0.0029 6.2E-08 47.2 7.6 68 136-215 26-98 (153)
198 KOG1282 Serine carboxypeptidas 97.0 0.015 3.2E-07 50.9 11.5 124 49-173 52-214 (454)
199 COG4287 PqaA PhoPQ-activated p 96.8 0.0042 9.2E-08 51.7 6.6 123 138-262 234-389 (507)
200 PF05576 Peptidase_S37: PS-10 96.8 0.0043 9.3E-08 52.6 6.7 98 65-168 61-165 (448)
201 PLN03016 sinapoylglucose-malat 96.7 0.025 5.5E-07 49.6 11.2 122 52-173 48-211 (433)
202 PLN02209 serine carboxypeptida 96.7 0.017 3.7E-07 50.7 9.9 123 51-173 49-213 (437)
203 PF11288 DUF3089: Protein of u 96.7 0.0036 7.7E-08 48.6 4.9 62 97-159 47-116 (207)
204 PF01764 Lipase_3: Lipase (cla 96.7 0.0035 7.7E-08 45.8 4.8 36 121-158 49-84 (140)
205 PF11187 DUF2974: Protein of u 96.6 0.0045 9.8E-08 49.1 5.5 92 54-170 25-121 (224)
206 cd00519 Lipase_3 Lipase (class 96.6 0.017 3.8E-07 46.1 9.0 49 122-172 114-168 (229)
207 PLN02517 phosphatidylcholine-s 96.5 0.0052 1.1E-07 54.8 5.5 85 82-172 157-263 (642)
208 PF01083 Cutinase: Cutinase; 96.4 0.014 3.1E-07 44.7 6.9 103 96-215 40-150 (179)
209 KOG4388 Hormone-sensitive lipa 96.1 0.012 2.6E-07 52.0 5.3 103 64-170 393-506 (880)
210 COG4947 Uncharacterized protei 96.0 0.045 9.8E-07 40.7 7.2 103 120-228 85-199 (227)
211 KOG2369 Lecithin:cholesterol a 95.9 0.025 5.4E-07 48.9 6.5 74 81-160 124-204 (473)
212 PLN02454 triacylglycerol lipas 95.9 0.019 4E-07 49.4 5.7 39 120-158 210-248 (414)
213 COG2939 Carboxypeptidase C (ca 95.7 0.099 2.1E-06 45.8 9.3 107 66-174 100-238 (498)
214 COG4553 DepA Poly-beta-hydroxy 95.5 0.83 1.8E-05 37.4 13.2 64 200-263 339-410 (415)
215 PF03283 PAE: Pectinacetyleste 95.5 0.11 2.3E-06 44.6 8.9 37 120-157 138-175 (361)
216 PLN02408 phospholipase A1 95.5 0.023 4.9E-07 48.2 4.5 39 121-159 183-221 (365)
217 PF06259 Abhydrolase_8: Alpha/ 95.4 0.17 3.7E-06 38.5 8.7 79 120-214 92-171 (177)
218 PLN02571 triacylglycerol lipas 95.2 0.029 6.3E-07 48.3 4.4 39 120-158 208-246 (413)
219 PLN00413 triacylglycerol lipas 95.1 0.035 7.5E-07 48.4 4.5 35 121-157 269-303 (479)
220 PLN02162 triacylglycerol lipas 95.0 0.036 7.7E-07 48.3 4.5 36 120-157 262-297 (475)
221 PLN02934 triacylglycerol lipas 94.9 0.041 9E-07 48.4 4.5 37 120-158 305-341 (515)
222 PLN02324 triacylglycerol lipas 94.9 0.039 8.5E-07 47.4 4.3 39 120-158 197-235 (415)
223 PF06850 PHB_depo_C: PHB de-po 94.7 0.072 1.6E-06 40.7 4.8 60 200-259 134-201 (202)
224 PLN02802 triacylglycerol lipas 94.5 0.053 1.1E-06 47.7 4.4 39 121-159 313-351 (509)
225 PLN02753 triacylglycerol lipas 93.9 0.085 1.8E-06 46.7 4.3 39 120-158 291-332 (531)
226 PLN02761 lipase class 3 family 93.7 0.099 2.1E-06 46.2 4.3 39 120-158 272-314 (527)
227 KOG4372 Predicted alpha/beta h 93.7 0.16 3.6E-06 43.2 5.5 88 65-158 78-170 (405)
228 PLN02310 triacylglycerol lipas 93.6 0.1 2.3E-06 44.9 4.3 38 121-158 190-229 (405)
229 COG3673 Uncharacterized conser 93.5 0.69 1.5E-05 38.3 8.5 94 65-159 29-143 (423)
230 KOG4540 Putative lipase essent 93.4 0.19 4.1E-06 40.7 5.1 49 119-170 259-307 (425)
231 COG5153 CVT17 Putative lipase 93.4 0.19 4.1E-06 40.7 5.1 49 119-170 259-307 (425)
232 KOG1202 Animal-type fatty acid 93.2 0.49 1.1E-05 46.1 8.2 94 65-171 2121-2218(2376)
233 PLN02719 triacylglycerol lipas 93.2 0.13 2.8E-06 45.5 4.2 39 120-158 277-318 (518)
234 PLN02213 sinapoylglucose-malat 93.0 0.47 1E-05 40.1 7.3 77 97-173 3-97 (319)
235 PLN03037 lipase class 3 family 93.0 0.14 3.1E-06 45.2 4.2 21 138-158 318-338 (525)
236 PF09994 DUF2235: Uncharacteri 92.9 0.71 1.5E-05 38.1 8.1 40 119-159 74-113 (277)
237 PF06441 EHN: Epoxide hydrolas 92.7 0.42 9E-06 33.4 5.5 36 51-86 75-111 (112)
238 KOG4569 Predicted lipase [Lipi 92.4 0.18 4E-06 42.8 4.1 37 120-158 155-191 (336)
239 PLN02847 triacylglycerol lipas 92.3 0.22 4.7E-06 44.8 4.5 22 137-158 250-271 (633)
240 PF08237 PE-PPE: PE-PPE domain 91.7 0.92 2E-05 36.1 7.0 64 95-159 2-69 (225)
241 PF05277 DUF726: Protein of un 90.1 0.84 1.8E-05 38.7 5.8 63 138-214 220-289 (345)
242 KOG1283 Serine carboxypeptidas 89.1 6.6 0.00014 32.8 9.8 130 49-180 9-174 (414)
243 PLN02213 sinapoylglucose-malat 86.8 2.4 5.2E-05 35.8 6.5 59 200-259 233-316 (319)
244 PTZ00472 serine carboxypeptida 85.7 2.2 4.7E-05 38.1 5.9 59 200-258 364-457 (462)
245 PLN03016 sinapoylglucose-malat 84.9 3.3 7.1E-05 36.6 6.6 58 200-258 347-429 (433)
246 PLN02209 serine carboxypeptida 83.8 3.8 8.3E-05 36.2 6.5 58 200-258 351-433 (437)
247 KOG2029 Uncharacterized conser 83.1 2.5 5.4E-05 38.2 5.0 48 122-170 510-570 (697)
248 KOG4389 Acetylcholinesterase/B 83.0 5.3 0.00011 35.4 6.8 87 66-153 134-233 (601)
249 COG4822 CbiK Cobalamin biosynt 82.9 9.7 0.00021 29.8 7.4 62 66-143 137-199 (265)
250 PF00450 Peptidase_S10: Serine 78.6 2.6 5.7E-05 36.9 3.8 59 200-258 330-414 (415)
251 COG1073 Hydrolases of the alph 76.6 12 0.00027 30.4 7.1 94 66-160 48-154 (299)
252 KOG1282 Serine carboxypeptidas 75.5 8.1 0.00018 34.3 5.8 59 201-259 364-447 (454)
253 COG0529 CysC Adenylylsulfate k 73.7 38 0.00083 25.9 8.7 39 65-103 20-59 (197)
254 PRK05282 (alpha)-aspartyl dipe 68.1 19 0.00041 28.9 5.9 39 66-104 30-70 (233)
255 PF12242 Eno-Rase_NADH_b: NAD( 67.9 10 0.00022 24.3 3.4 44 117-160 18-62 (78)
256 PF10081 Abhydrolase_9: Alpha/ 66.0 52 0.0011 27.2 7.9 85 86-172 53-147 (289)
257 PF00326 Peptidase_S9: Prolyl 63.2 23 0.00049 27.6 5.6 66 66-134 143-211 (213)
258 COG2830 Uncharacterized protei 63.1 15 0.00033 27.4 4.1 78 66-170 10-88 (214)
259 PF09949 DUF2183: Uncharacteri 62.5 47 0.001 22.6 8.3 85 81-167 10-97 (100)
260 COG3340 PepE Peptidase E [Amin 58.3 46 0.00099 26.2 6.1 40 65-104 30-71 (224)
261 COG0552 FtsY Signal recognitio 58.1 1.2E+02 0.0026 25.9 9.2 72 92-168 218-292 (340)
262 KOG0094 GTPase Rab6/YPT6/Ryh1, 53.2 46 0.00099 25.9 5.3 55 80-144 81-135 (221)
263 PF06309 Torsin: Torsin; Inte 51.6 25 0.00053 25.2 3.5 21 64-84 49-69 (127)
264 KOG4287 Pectin acetylesterase 48.4 9.3 0.0002 32.3 1.1 92 121-212 159-281 (402)
265 cd07212 Pat_PNPLA9 Patatin-lik 48.4 28 0.00061 29.3 4.0 38 123-160 15-54 (312)
266 KOG2805 tRNA (5-methylaminomet 47.9 90 0.0019 26.3 6.5 36 66-106 5-40 (377)
267 cd07225 Pat_PNPLA6_PNPLA7 Pata 47.1 23 0.0005 29.7 3.3 34 123-159 31-64 (306)
268 cd07198 Patatin Patatin-like p 47.0 25 0.00053 26.5 3.2 35 123-160 14-48 (172)
269 PF11713 Peptidase_C80: Peptid 46.8 20 0.00043 26.8 2.6 51 100-150 58-116 (157)
270 COG1506 DAP2 Dipeptidyl aminop 46.5 80 0.0017 29.6 7.0 66 66-134 550-618 (620)
271 PF00698 Acyl_transf_1: Acyl t 46.3 17 0.00037 30.6 2.5 27 130-158 78-104 (318)
272 KOG2385 Uncharacterized conser 46.0 47 0.001 29.9 5.0 36 138-173 447-488 (633)
273 smart00827 PKS_AT Acyl transfe 45.9 29 0.00064 28.7 3.8 26 131-158 77-102 (298)
274 cd07224 Pat_like Patatin-like 45.8 27 0.00058 28.0 3.4 37 123-160 15-51 (233)
275 PRK02399 hypothetical protein; 45.4 2.1E+02 0.0046 25.1 10.6 88 71-160 6-119 (406)
276 PF01583 APS_kinase: Adenylyls 45.2 54 0.0012 24.4 4.6 38 67-104 1-39 (156)
277 COG0541 Ffh Signal recognition 44.5 2.3E+02 0.005 25.2 9.8 71 86-168 174-247 (451)
278 KOG0781 Signal recognition par 44.5 1.1E+02 0.0024 27.6 6.9 76 71-157 442-517 (587)
279 PF06792 UPF0261: Uncharacteri 44.1 2.3E+02 0.0049 25.0 10.4 88 71-160 4-117 (403)
280 PRK02929 L-arabinose isomerase 44.1 2E+02 0.0044 26.2 8.8 20 239-261 149-168 (499)
281 PRK10279 hypothetical protein; 43.7 25 0.00054 29.4 3.0 34 123-159 21-54 (300)
282 cd07207 Pat_ExoU_VipD_like Exo 43.4 28 0.00061 26.7 3.1 35 123-160 15-49 (194)
283 cd07210 Pat_hypo_W_succinogene 43.1 32 0.0007 27.3 3.4 33 124-159 17-49 (221)
284 TIGR03131 malonate_mdcH malona 41.6 36 0.00078 28.3 3.7 27 131-159 71-97 (295)
285 PRK05579 bifunctional phosphop 40.8 2.5E+02 0.0055 24.7 9.1 60 82-145 134-196 (399)
286 PF02610 Arabinose_Isome: L-ar 39.7 2.3E+02 0.0051 24.4 8.0 63 193-262 90-169 (359)
287 PF10605 3HBOH: 3HB-oligomer h 39.4 28 0.00061 32.0 2.7 43 200-242 555-604 (690)
288 TIGR02069 cyanophycinase cyano 39.4 83 0.0018 25.6 5.3 40 65-104 26-66 (250)
289 TIGR00128 fabD malonyl CoA-acy 39.3 39 0.00085 27.8 3.6 22 138-159 83-104 (290)
290 PRK12467 peptide synthase; Pro 38.5 1.4E+02 0.0031 35.0 8.5 87 67-159 3692-3778(3956)
291 KOG1532 GTPase XAB1, interacts 38.2 2.4E+02 0.0051 23.6 12.0 69 137-212 124-193 (366)
292 COG4874 Uncharacterized protei 37.7 1.1E+02 0.0023 24.7 5.3 27 84-111 60-86 (318)
293 COG5441 Uncharacterized conser 37.1 2.5E+02 0.0055 23.6 8.0 90 69-160 3-115 (401)
294 TIGR02816 pfaB_fam PfaB family 37.0 36 0.00078 31.1 3.1 28 131-160 260-287 (538)
295 PF10686 DUF2493: Protein of u 36.6 62 0.0013 20.4 3.3 33 66-101 30-63 (71)
296 cd07227 Pat_Fungal_NTE1 Fungal 36.1 44 0.00094 27.5 3.2 34 123-159 26-59 (269)
297 cd00382 beta_CA Carbonic anhyd 36.0 65 0.0014 22.7 3.8 31 120-152 43-73 (119)
298 cd00883 beta_CA_cladeA Carboni 35.0 59 0.0013 24.9 3.6 32 121-154 66-97 (182)
299 cd07209 Pat_hypo_Ecoli_Z1214_l 34.6 45 0.00097 26.3 3.0 34 124-160 15-48 (215)
300 cd07228 Pat_NTE_like_bacteria 34.1 54 0.0012 24.7 3.3 35 123-160 16-50 (175)
301 cd07211 Pat_PNPLA8 Patatin-lik 34.1 54 0.0012 27.5 3.6 35 123-157 24-60 (308)
302 cd07205 Pat_PNPLA6_PNPLA7_NTE1 33.9 52 0.0011 24.8 3.2 34 123-159 16-49 (175)
303 COG1087 GalE UDP-glucose 4-epi 33.2 2.4E+02 0.0053 23.8 6.9 82 86-170 16-118 (329)
304 PF13728 TraF: F plasmid trans 33.1 1.1E+02 0.0025 24.1 5.1 45 66-110 121-165 (215)
305 PF02230 Abhydrolase_2: Phosph 32.6 1.6E+02 0.0034 23.0 5.9 58 67-131 155-214 (216)
306 COG2312 Erythromycin esterase 32.2 98 0.0021 27.0 4.7 73 84-156 65-159 (405)
307 cd03557 L-arabinose_isomerase 32.0 3.9E+02 0.0086 24.3 11.1 103 138-261 40-162 (484)
308 COG0331 FabD (acyl-carrier-pro 31.8 53 0.0011 27.7 3.1 31 126-157 74-104 (310)
309 COG3727 Vsr DNA G:T-mismatch r 31.6 91 0.002 22.5 3.7 11 66-76 56-66 (150)
310 PF07643 DUF1598: Protein of u 31.6 1.5E+02 0.0032 19.5 4.4 38 121-160 28-65 (84)
311 PF14253 AbiH: Bacteriophage a 31.3 38 0.00082 27.6 2.2 14 137-150 234-247 (270)
312 PHA02114 hypothetical protein 31.2 72 0.0016 21.5 3.0 35 67-102 82-116 (127)
313 TIGR00521 coaBC_dfp phosphopan 31.0 3.7E+02 0.008 23.6 8.4 21 81-102 129-149 (390)
314 PLN03006 carbonate dehydratase 30.7 70 0.0015 26.8 3.5 29 122-152 158-186 (301)
315 cd03146 GAT1_Peptidase_E Type 30.5 2.7E+02 0.0058 21.8 7.1 40 65-104 29-69 (212)
316 TIGR00632 vsr DNA mismatch end 29.7 1.5E+02 0.0033 20.9 4.6 12 66-77 55-66 (117)
317 PF09419 PGP_phosphatase: Mito 29.6 2.3E+02 0.005 21.4 5.9 52 92-148 37-88 (168)
318 PRK13728 conjugal transfer pro 29.5 1.6E+02 0.0034 22.7 5.1 53 48-106 58-110 (181)
319 cd00884 beta_CA_cladeB Carboni 29.4 1.4E+02 0.0029 23.2 4.8 31 121-153 72-102 (190)
320 PF01674 Lipase_2: Lipase (cla 29.3 1.6E+02 0.0034 23.5 5.2 65 201-266 2-75 (219)
321 TIGR02873 spore_ylxY probable 28.8 78 0.0017 26.0 3.6 34 68-102 231-264 (268)
322 KOG2872 Uroporphyrinogen decar 28.6 2E+02 0.0043 24.0 5.6 72 66-146 251-336 (359)
323 COG3007 Uncharacterized paraqu 28.5 1.3E+02 0.0028 25.1 4.6 44 117-160 19-64 (398)
324 KOG0855 Alkyl hydroperoxide re 28.2 2E+02 0.0044 21.8 5.2 59 41-102 67-131 (211)
325 PLN03019 carbonic anhydrase 28.2 1.2E+02 0.0025 25.8 4.5 31 121-153 200-230 (330)
326 COG3933 Transcriptional antite 28.1 4.4E+02 0.0096 23.6 8.6 75 65-155 107-182 (470)
327 KOG3551 Syntrophins (type beta 28.1 49 0.0011 28.5 2.2 43 37-79 445-497 (506)
328 TIGR03709 PPK2_rel_1 polyphosp 27.7 1E+02 0.0022 25.4 4.0 38 66-104 54-93 (264)
329 cd07218 Pat_iPLA2 Calcium-inde 27.3 91 0.002 25.2 3.7 37 123-160 16-52 (245)
330 PF13207 AAA_17: AAA domain; P 27.1 94 0.002 21.3 3.4 32 70-103 1-32 (121)
331 cd05312 NAD_bind_1_malic_enz N 26.9 85 0.0019 26.0 3.5 38 69-106 26-70 (279)
332 COG3101 Uncharacterized protei 26.7 91 0.002 22.7 3.1 38 66-104 41-84 (180)
333 COG0482 TrmU Predicted tRNA(5- 26.7 1.7E+02 0.0038 25.2 5.3 37 67-108 4-40 (356)
334 cd07230 Pat_TGL4-5_like Triacy 26.6 63 0.0014 28.6 2.9 35 123-160 89-123 (421)
335 PLN00416 carbonate dehydratase 26.3 98 0.0021 25.3 3.7 31 121-153 125-155 (258)
336 KOG4231 Intracellular membrane 26.2 78 0.0017 28.6 3.2 53 92-158 413-470 (763)
337 PLN03014 carbonic anhydrase 26.0 87 0.0019 26.7 3.4 31 121-153 205-236 (347)
338 TIGR02764 spore_ybaN_pdaB poly 25.7 73 0.0016 24.4 2.8 34 68-102 152-188 (191)
339 PRK15219 carbonic anhydrase; P 25.6 1.1E+02 0.0024 24.8 3.8 31 121-153 128-158 (245)
340 PF01581 FARP: FMRFamide relat 25.6 35 0.00076 12.9 0.5 8 285-292 4-11 (11)
341 TIGR03586 PseI pseudaminic aci 25.5 4.3E+02 0.0093 22.6 8.8 81 66-158 133-214 (327)
342 TIGR00342 thiazole biosynthesi 25.5 4.1E+02 0.009 23.0 7.6 54 46-104 145-205 (371)
343 COG2240 PdxK Pyridoxal/pyridox 25.3 4E+02 0.0087 22.2 8.5 94 72-173 10-114 (281)
344 COG0431 Predicted flavoprotein 24.8 2.5E+02 0.0054 21.5 5.5 65 83-159 58-122 (184)
345 TIGR02884 spore_pdaA delta-lac 24.6 1.3E+02 0.0029 23.8 4.1 35 67-102 186-221 (224)
346 PLN02154 carbonic anhydrase 24.2 1.2E+02 0.0026 25.3 3.8 31 121-153 151-181 (290)
347 TIGR03707 PPK2_P_aer polyphosp 23.9 1.2E+02 0.0026 24.3 3.8 38 66-104 29-68 (230)
348 PF04260 DUF436: Protein of un 23.9 1.2E+02 0.0026 22.8 3.4 27 121-147 2-28 (172)
349 PF01118 Semialdhyde_dh: Semia 23.9 82 0.0018 22.0 2.6 31 139-169 1-32 (121)
350 PF08253 Leader_Erm: Erm Leade 23.8 54 0.0012 14.5 1.0 17 1-17 1-17 (19)
351 PF00484 Pro_CA: Carbonic anhy 22.9 1.8E+02 0.0039 21.3 4.4 34 119-154 38-71 (153)
352 TIGR01440 conserved hypothetic 22.6 1.5E+02 0.0032 22.3 3.6 27 121-147 2-28 (172)
353 COG1092 Predicted SAM-dependen 22.5 4.3E+02 0.0094 23.3 7.0 51 95-149 290-340 (393)
354 COG1752 RssA Predicted esteras 22.5 93 0.002 26.1 3.0 31 125-158 29-59 (306)
355 cd03379 beta_CA_cladeD Carboni 22.5 1.3E+02 0.0027 22.0 3.4 25 121-147 41-65 (142)
356 cd06570 GH20_chitobiase-like_1 22.2 4.8E+02 0.01 22.0 7.3 33 75-108 62-95 (311)
357 COG0159 TrpA Tryptophan syntha 22.2 3.4E+02 0.0075 22.3 6.0 130 67-225 95-226 (265)
358 PRK13703 conjugal pilus assemb 22.1 2.3E+02 0.0051 23.0 5.0 43 67-109 145-187 (248)
359 PRK10437 carbonic anhydrase; P 22.0 1.4E+02 0.0031 23.7 3.8 31 121-153 76-106 (220)
360 COG0400 Predicted esterase [Ge 21.7 4E+02 0.0087 20.9 6.5 57 66-131 145-204 (207)
361 cd07204 Pat_PNPLA_like Patatin 21.5 1.3E+02 0.0028 24.3 3.5 37 123-160 15-53 (243)
362 cd07232 Pat_PLPL Patain-like p 21.5 91 0.002 27.5 2.9 34 123-159 83-116 (407)
363 TIGR02739 TraF type-F conjugat 21.4 2.4E+02 0.0052 23.1 5.0 44 67-110 152-195 (256)
364 TIGR03569 NeuB_NnaB N-acetylne 21.4 5.2E+02 0.011 22.1 8.4 81 66-158 132-215 (329)
365 COG0218 Predicted GTPase [Gene 21.3 1.4E+02 0.003 23.4 3.4 64 193-259 128-198 (200)
366 cd07229 Pat_TGL3_like Triacylg 21.3 1E+02 0.0022 26.9 3.1 33 124-159 100-132 (391)
367 PRK13690 hypothetical protein; 21.0 1.7E+02 0.0037 22.3 3.7 30 118-147 6-35 (184)
368 TIGR02717 AcCoA-syn-alpha acet 21.0 5.7E+02 0.012 22.9 7.8 32 120-151 278-309 (447)
369 cd06562 GH20_HexA_HexB-like Be 20.7 3.3E+02 0.0072 23.4 6.0 31 78-109 67-98 (348)
370 PF00578 AhpC-TSA: AhpC/TSA fa 20.6 2.9E+02 0.0062 18.8 5.1 57 43-103 5-67 (124)
371 KOG1465 Translation initiation 20.6 4.2E+02 0.0092 22.3 6.1 33 68-103 163-196 (353)
372 COG3946 VirJ Type IV secretory 20.5 6.1E+02 0.013 22.5 7.5 104 65-169 46-154 (456)
373 PF03976 PPK2: Polyphosphate k 20.4 80 0.0017 25.3 2.1 39 66-104 29-68 (228)
374 COG0288 CynT Carbonic anhydras 20.4 1.2E+02 0.0025 24.0 2.9 34 120-155 76-109 (207)
375 TIGR00365 monothiol glutaredox 20.3 2.8E+02 0.006 18.5 6.8 79 66-160 11-91 (97)
376 PF08433 KTI12: Chromatin asso 20.3 5E+02 0.011 21.4 7.1 39 69-107 2-41 (270)
377 PF05577 Peptidase_S28: Serine 20.2 1.5E+02 0.0032 26.3 4.0 38 201-242 377-414 (434)
No 1
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=229.14 Aligned_cols=252 Identities=56% Similarity=0.931 Sum_probs=221.5
Q ss_pred CCceeecccccccccCCCCCCceeeecCCCceeeeccc-CCCCceeEEEEccCCCEEEEEEEeCCCC-ceEEEEEcCCCC
Q 022700 1 MGIVTSSVAAKFAFFPPDPPTYGVSREEDGRLVFSGVT-ADKNMDCHLLETKNGNKIVATFWRHPFA-RFTLLYSHGNAA 78 (293)
Q Consensus 1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~vv~~hG~~~ 78 (293)
|..++++.++|++++...+....+.. ... ....++....++..|..+.+.++.++.. .+++++.||...
T Consensus 1 ~~~~~~~iaaklaf~~~~~~~~~~~~---------~~~~~~~~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~ 71 (258)
T KOG1552|consen 1 MPPVTSSIAAKLAFFPPEPPRLLLLP---------EIRAMREFVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAA 71 (258)
T ss_pred CCccchhHHHHhhccccCCcCeeecc---------cccccCCccceEEeecCCCCEEEEEEEcCccccceEEEEcCCccc
Confidence 56778899999999944333222221 111 1237888889999999999999988765 699999999988
Q ss_pred ChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 79 DLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+...+..++..+....+++++.+||+|+|.|.+++.+.+.++|+.++.+++++.+| +.++|+|+|+|+|...++.+|++
T Consensus 72 Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr 150 (258)
T KOG1552|consen 72 DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASR 150 (258)
T ss_pred chHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhc
Confidence 88877788888867789999999999999999999999999999999999999998 67999999999999999999999
Q ss_pred cCCccEEEEecchhhhhhhccc-hhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecC
Q 022700 159 LQKLRGVVLHSAILSGIRVLYP-VKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKG 237 (293)
Q Consensus 159 ~p~v~~~i~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
.| +.++|+.+|+.++.+.+.+ ....+|.+.|...+.++.+++|+|++||++|++++..+..++++..++..+-.++.|
T Consensus 151 ~~-~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g 229 (258)
T KOG1552|consen 151 YP-LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKG 229 (258)
T ss_pred CC-cceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEec
Confidence 99 9999999999999999988 555689999999999999999999999999999999999999999999888899999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhhhc
Q 022700 238 GGHCNLETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 238 ~~H~~~~~~~~~~~~i~~fl~~~~~~ 263 (293)
+||...+..+++.+.+..|+......
T Consensus 230 ~gH~~~~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 230 AGHNDIELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred CCCcccccCHHHHHHHHHHHHHhccc
Confidence 99999999899999999999887653
No 2
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.96 E-value=3.5e-29 Score=186.73 Aligned_cols=225 Identities=25% Similarity=0.407 Sum_probs=196.0
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCch
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNT 118 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~ 118 (293)
...++|.+.+.+.|...+++++...+.++|+++++|+..++.......+.-+....+.+|+.++|||+|.|.+.+++...
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL 129 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL 129 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccce
Confidence 45688899999999999999999888899999999999999988888888887889999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhh--------hh-hhh
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKM--------TL-WFD 188 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~--------~~-~~~ 188 (293)
.-|.+++++|+..+...+..+++++|.|+||.+|..+|++.. ++.++|+.+.+.+..+...+... .+ ..+
T Consensus 130 ~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn 209 (300)
T KOG4391|consen 130 KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKN 209 (300)
T ss_pred eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHh
Confidence 999999999999998888889999999999999999999887 69999999988876443332221 11 223
Q ss_pred cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCC-cceEEecCCCCCCCCCchHHHHHHHHHHHHhhhc
Q 022700 189 IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEK-YDPLWVKGGGHCNLETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 189 ~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~~ 263 (293)
.|.+...+.+...|.|++.|.+|.++|+-+.+++++.++.. +++..+|++.|......+.+++.|.+||.+....
T Consensus 210 ~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 210 KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhccC
Confidence 56677778888899999999999999999999999999764 5788999999998777788999999999987764
No 3
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=6.3e-28 Score=199.09 Aligned_cols=211 Identities=20% Similarity=0.318 Sum_probs=155.7
Q ss_pred EEEccCCCEEEEEEEeCC-CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC----chhhh
Q 022700 47 LLETKNGNKIVATFWRHP-FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF----NTYYD 121 (293)
Q Consensus 47 ~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~----~~~~d 121 (293)
.+...||.++.++.|.+. ..+++|+++||++++...|..++..+ .+.||.|+++|+||||.|.+..... ...+|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l-~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENI-SSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHH-HhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 345669999999888774 56788888899999999999888887 7789999999999999997543221 12345
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhh-------------ccch------
Q 022700 122 IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRV-------------LYPV------ 181 (293)
Q Consensus 122 ~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~-------------~~~~------ 181 (293)
+.+.++++.+.. ...+++++||||||.+|+.++..+|+ ++++|+++|....... ..+.
T Consensus 83 ~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T PHA02857 83 VVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKL 160 (276)
T ss_pred HHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCC
Confidence 555555554443 23689999999999999999999985 8999999986431100 0000
Q ss_pred hh-----------hhhhhcc-------------------cChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcc
Q 022700 182 KM-----------TLWFDIY-------------------KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYD 231 (293)
Q Consensus 182 ~~-----------~~~~~~~-------------------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 231 (293)
.. .+..+.+ .....+.++++|+|+++|++|.++|++.++.+.+.+....+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 161 CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 00 0000000 00234567899999999999999999999999998865568
Q ss_pred eEEecCCCCCCCCCch----HHHHHHHHHHHHh
Q 022700 232 PLWVKGGGHCNLETYP----EYIKHLRKFINAM 260 (293)
Q Consensus 232 ~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~ 260 (293)
+.+++++||....+.+ ++.+.+.+||+..
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 8999999999876654 4778888998874
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=5e-28 Score=205.91 Aligned_cols=219 Identities=19% Similarity=0.291 Sum_probs=154.5
Q ss_pred CceeEEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCch
Q 022700 42 NMDCHLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNT 118 (293)
Q Consensus 42 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~ 118 (293)
..++..+.+.+|.++.+..+.++ ..+++|||+||++++... |..+...+ .+.||.|+++|+||||.|++.......
T Consensus 60 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l-~~~g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 60 KTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKI-ASSGYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred ceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHH-HhCCCEEEEecCCCCCCCCCCCCCcCC
Confidence 34555677789999999888765 357899999999988655 45566666 678999999999999999854322222
Q ss_pred ----hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhh----------------
Q 022700 119 ----YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRV---------------- 177 (293)
Q Consensus 119 ----~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~---------------- 177 (293)
.+|+.+.++.+......+..+++|+||||||.+++.++.++|+ ++++|+++|.......
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHH
Confidence 3444444444433222233589999999999999999999995 9999999985421000
Q ss_pred ------ccch---hhhhhh------------hcc-----------------cChhhhhcCCCcEEEEecCCCCccChhhH
Q 022700 178 ------LYPV---KMTLWF------------DIY-----------------KNIDKIRHVNCPVLVIHGTNDDIVDLSHG 219 (293)
Q Consensus 178 ------~~~~---~~~~~~------------~~~-----------------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~ 219 (293)
..+. ....+. ..+ +....+.++++|+|+++|++|.+++++.+
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~ 298 (349)
T PLN02385 219 LLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVS 298 (349)
T ss_pred HCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHH
Confidence 0000 000000 000 00123567899999999999999999999
Q ss_pred HHHHHHhcC-CcceEEecCCCCCCCCCch-H----HHHHHHHHHHHhh
Q 022700 220 KRLWELSKE-KYDPLWVKGGGHCNLETYP-E----YIKHLRKFINAME 261 (293)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-~----~~~~i~~fl~~~~ 261 (293)
+.+++.+.. ..++++++++||..+.+.+ + +.+.|.+||++..
T Consensus 299 ~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 299 KFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999998853 4588999999999876554 3 6778889998653
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=8e-28 Score=203.37 Aligned_cols=221 Identities=20% Similarity=0.258 Sum_probs=157.1
Q ss_pred CCceeEEEEccCCCEEEEEEEeCCC---CceEEEEEcCCCCChh-hHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC
Q 022700 41 KNMDCHLLETKNGNKIVATFWRHPF---ARFTLLYSHGNAADLG-QMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF 116 (293)
Q Consensus 41 ~~~~~~~~~~~~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~-~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~ 116 (293)
...+...+...||.+++++.+.+++ .+++|||+||++.+.. .+......+ .+.||+|+++|+||||.|.+.....
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L-~~~Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFL-AQMGFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHH-HhCCCEEEEecCCCCCCCCCccccC
Confidence 3455677888899999998776543 4688999999986643 334444455 7789999999999999997533221
Q ss_pred ----chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhc-------------
Q 022700 117 ----NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVL------------- 178 (293)
Q Consensus 117 ----~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~------------- 178 (293)
...+|+..+++++......+..+++|+||||||.+++.++.++|. ++++|+++|........
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 234677778887765433334589999999999999999999995 99999999864311100
Q ss_pred ---cch------h---h--------hhh----hhccc-----------------ChhhhhcCCCcEEEEecCCCCccChh
Q 022700 179 ---YPV------K---M--------TLW----FDIYK-----------------NIDKIRHVNCPVLVIHGTNDDIVDLS 217 (293)
Q Consensus 179 ---~~~------~---~--------~~~----~~~~~-----------------~~~~l~~i~~P~l~i~g~~D~~~~~~ 217 (293)
.+. . . ... ...+. ....+.++++|+|+++|++|.+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 000 0 0 000 00000 12335678999999999999999999
Q ss_pred hHHHHHHHhcC-CcceEEecCCCCCCCCCch-----HHHHHHHHHHHHhhh
Q 022700 218 HGKRLWELSKE-KYDPLWVKGGGHCNLETYP-----EYIKHLRKFINAMEK 262 (293)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-----~~~~~i~~fl~~~~~ 262 (293)
.++.+++.++. ..+++++++++|..+.+.+ ++.+.+.+||.+...
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999988763 4588899999999865443 366788889888653
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=190.20 Aligned_cols=211 Identities=20% Similarity=0.219 Sum_probs=158.8
Q ss_pred eeEEEEccCCCEEEEEEEeCC----CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc-cCCCCCCCCC--
Q 022700 44 DCHLLETKNGNKIVATFWRHP----FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY-GASTGKPSEF-- 116 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~-G~s~~~~~~~-- 116 (293)
...-+.+.||..|.+++..|. .+.++||++||++.....+..+...| .+.||+|+.+|++|+ |+|++.....
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~L-a~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYL-SSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHH-HHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 345677889999999999885 24589999999999876666666666 899999999999987 9998755322
Q ss_pred -chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhcc----------ch----
Q 022700 117 -NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLY----------PV---- 181 (293)
Q Consensus 117 -~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~----------~~---- 181 (293)
....|+..+++|++++ + .++++|+||||||.+++.+|... +++++|+.+|+.+...... +.
T Consensus 89 s~g~~Dl~aaid~lk~~-~--~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp 164 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTR-G--INNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELP 164 (307)
T ss_pred cccHHHHHHHHHHHHhc-C--CCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCcccccc
Confidence 2358999999999875 3 37899999999999997776644 5999999999877321111 00
Q ss_pred -----------hhhhhhhcc--------cChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhc-CCcceEEecCCCCC
Q 022700 182 -----------KMTLWFDIY--------KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSK-EKYDPLWVKGGGHC 241 (293)
Q Consensus 182 -----------~~~~~~~~~--------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~ 241 (293)
...+..+.+ ...+.+++++.|+|+|||++|.+|+.+.++.+++.++ ..++++.++|++|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 011222211 1235567788999999999999999999999999886 46689999999998
Q ss_pred CCCCchHHHHHHHHHHHHhhhc
Q 022700 242 NLETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 242 ~~~~~~~~~~~i~~fl~~~~~~ 263 (293)
+.+.. -.++.|.+.+.+.
T Consensus 245 l~~~~----~~~~~~~~~~~~~ 262 (307)
T PRK13604 245 LGENL----VVLRNFYQSVTKA 262 (307)
T ss_pred cCcch----HHHHHHHHHHHHH
Confidence 76532 3556677766654
No 7
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.7e-27 Score=186.53 Aligned_cols=217 Identities=19% Similarity=0.258 Sum_probs=160.5
Q ss_pred CceeEEEEccCCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHH-HHHHHHhhcCeeEEEEccccccCCCCCCCCC-
Q 022700 42 NMDCHLLETKNGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLE-LFIELRAHLRVNIMSYDYSGYGASTGKPSEF- 116 (293)
Q Consensus 42 ~~~~~~~~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~-~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~- 116 (293)
....-.+.+.+|..+.+..|.+. ..+..|+++||++........ .+..+ +..||.|+++|++|||.|++.....
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l-~~~g~~v~a~D~~GhG~SdGl~~yi~ 104 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRL-AKSGFAVYAIDYEGHGRSDGLHAYVP 104 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHH-HhCCCeEEEeeccCCCcCCCCcccCC
Confidence 35566788999999999999873 457799999999988744444 55555 8999999999999999999754433
Q ss_pred ---chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccc------------
Q 022700 117 ---NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYP------------ 180 (293)
Q Consensus 117 ---~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~------------ 180 (293)
..++|+...++.++.+......+..++||||||.+++.++.+.|+ ..++|+++|+........+
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~ 184 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLS 184 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHH
Confidence 344666666666655554455689999999999999999999996 7999999985432111100
Q ss_pred ----------hh---hhhhhh-----------------------------cccChhhhhcCCCcEEEEecCCCCccChhh
Q 022700 181 ----------VK---MTLWFD-----------------------------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSH 218 (293)
Q Consensus 181 ----------~~---~~~~~~-----------------------------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~ 218 (293)
.. ...+.+ ..+....+.++++|.+++||+.|.++++..
T Consensus 185 ~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~ 264 (313)
T KOG1455|consen 185 KLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKV 264 (313)
T ss_pred HhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHH
Confidence 00 000000 001134567889999999999999999999
Q ss_pred HHHHHHHhcC-CcceEEecCCCCCCCC-Cch----HHHHHHHHHHHH
Q 022700 219 GKRLWELSKE-KYDPLWVKGGGHCNLE-TYP----EYIKHLRKFINA 259 (293)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~H~~~~-~~~----~~~~~i~~fl~~ 259 (293)
++.+++.+.. .+++.+|||.-|..+. +.+ .+...|.+||++
T Consensus 265 Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 265 SKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 9999999865 5688999999999864 333 367888888875
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=5.7e-27 Score=197.73 Aligned_cols=213 Identities=16% Similarity=0.207 Sum_probs=152.0
Q ss_pred eeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC-----Cch
Q 022700 44 DCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE-----FNT 118 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~-----~~~ 118 (293)
++..+...+|.++++..+.++.++++||++||++++...|..++..+ .+.||.|+++|+||||.|++.... ...
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l-~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 109 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDL-FHLGYDVLIIDHRGQGRSGRLLDDPHRGHVER 109 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHH-HHCCCeEEEEcCCCCCCCCCCCCCCCcCcccc
Confidence 34566777899999988876667789999999999888888887777 678999999999999999743211 112
Q ss_pred h----hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhh------------hc---
Q 022700 119 Y----YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIR------------VL--- 178 (293)
Q Consensus 119 ~----~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~------------~~--- 178 (293)
+ +|+..+++.+....+ ..+++++||||||.+++.++..+|. ++++|+++|...... ..
T Consensus 110 ~~~~~~d~~~~~~~~~~~~~--~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQPGP--YRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 3 344444444433323 3789999999999999999999985 899999998642100 00
Q ss_pred --------------cch---------hhh---hhhhcc------------------------cChhhhhcCCCcEEEEec
Q 022700 179 --------------YPV---------KMT---LWFDIY------------------------KNIDKIRHVNCPVLVIHG 208 (293)
Q Consensus 179 --------------~~~---------~~~---~~~~~~------------------------~~~~~l~~i~~P~l~i~g 208 (293)
.+. ... .+.+.+ .....+.++++|+|+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 000 000 000000 001234678899999999
Q ss_pred CCCCccChhhHHHHHHHhcC------CcceEEecCCCCCCCCCch----HHHHHHHHHHHH
Q 022700 209 TNDDIVDLSHGKRLWELSKE------KYDPLWVKGGGHCNLETYP----EYIKHLRKFINA 259 (293)
Q Consensus 209 ~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~ 259 (293)
++|.+++++.++.+++.++. ..+++++++++|..+.+.+ ++.+.|.+||++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 99999999999988887642 2478999999999876553 477888888875
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=2.8e-26 Score=189.18 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=153.2
Q ss_pred cCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHH
Q 022700 51 KNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLK 130 (293)
Q Consensus 51 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~ 130 (293)
.+|.++++.+......+++|||+||++++...|..++..+ .+ +|+|+++|+||||.|+... ....++++.+.+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L-~~-~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i 85 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEAL-DP-DLEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARML 85 (276)
T ss_pred cCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHh-cc-CceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHH
Confidence 3677888776643334578999999999999999888887 43 6899999999999997432 3345566666677777
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh---------hhc-c------chh-----h-----
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI---------RVL-Y------PVK-----M----- 183 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~---------~~~-~------~~~-----~----- 183 (293)
+.+++ ++++|+||||||.+++.+|.++| +++++|++++..... ... . ... .
T Consensus 86 ~~l~~--~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T TIGR02240 86 DYLDY--GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGG 163 (276)
T ss_pred HHhCc--CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccc
Confidence 77765 78999999999999999999999 599999998753210 000 0 000 0
Q ss_pred ------hhh---h-------------h-----cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEec
Q 022700 184 ------TLW---F-------------D-----IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVK 236 (293)
Q Consensus 184 ------~~~---~-------------~-----~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
... . . .......+.++++|+|+++|++|.+++++..+.+.+.+++. ++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~-~~~~i~ 242 (276)
T TIGR02240 164 AFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNA-ELHIID 242 (276)
T ss_pred eeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCC-EEEEEc
Confidence 000 0 0 00012346788999999999999999999999999988875 788887
Q ss_pred CCCCCCCCCch-HHHHHHHHHHHHhhhc
Q 022700 237 GGGHCNLETYP-EYIKHLRKFINAMEKL 263 (293)
Q Consensus 237 ~~~H~~~~~~~-~~~~~i~~fl~~~~~~ 263 (293)
+ ||..+.+.+ ++.+.|.+|+++....
T Consensus 243 ~-gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 243 D-GHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred C-CCchhhccHHHHHHHHHHHHHHhhhh
Confidence 5 999877766 6999999999986653
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=1.5e-25 Score=187.28 Aligned_cols=210 Identities=18% Similarity=0.163 Sum_probs=146.7
Q ss_pred EEEEccCCCEEEEEEEeC-CCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhHH
Q 022700 46 HLLETKNGNKIVATFWRH-PFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDIE 123 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~~ 123 (293)
+.+...+|..+...|... +..+|+|||+||++++...|..++..| .+.||+|+++|+||||.|+.... .....++..
T Consensus 24 ~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L-~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a 102 (302)
T PRK00870 24 VDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPIL-AAAGHRVIAPDLIGFGRSDKPTRREDYTYARHV 102 (302)
T ss_pred EeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHH-HhCCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 444444455433333322 224689999999999999999888887 66799999999999999974332 223456666
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh--------hc------cc--------
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR--------VL------YP-------- 180 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~--------~~------~~-------- 180 (293)
+.+..+.++.++ ++++++||||||.+++.++..+| ++++++++++...... .. .+
T Consensus 103 ~~l~~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (302)
T PRK00870 103 EWMRSWFEQLDL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLV 180 (302)
T ss_pred HHHHHHHHHcCC--CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHh
Confidence 666666667665 78999999999999999999998 5999999986321000 00 00
Q ss_pred -----------hhhhhh--------hh---cc---------c--------ChhhhhcCCCcEEEEecCCCCccChhhHHH
Q 022700 181 -----------VKMTLW--------FD---IY---------K--------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKR 221 (293)
Q Consensus 181 -----------~~~~~~--------~~---~~---------~--------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~ 221 (293)
....+. .. .+ . ....+.++++|+++|+|++|.+++... +.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~ 259 (302)
T PRK00870 181 NGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI 259 (302)
T ss_pred hccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH
Confidence 000000 00 00 0 012356789999999999999999766 77
Q ss_pred HHHHhcCCc--ceEEecCCCCCCCCCch-HHHHHHHHHHHH
Q 022700 222 LWELSKEKY--DPLWVKGGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 222 ~~~~~~~~~--~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
+.+.+++.. .+.+++++||..+.+.+ ++.+.|.+||++
T Consensus 260 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 260 LQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred HHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 888777641 37789999999877766 588999999975
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=2.4e-25 Score=184.22 Aligned_cols=190 Identities=16% Similarity=0.230 Sum_probs=135.1
Q ss_pred CCceEEEEEcCCCCChhhHHHH---HHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEE
Q 022700 65 FARFTLLYSHGNAADLGQMLEL---FIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELI 141 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~---~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~ 141 (293)
+.+|+|||+||++.+...|... +..+ .+.||+|+++|+||||.|+.............+.+..+.+..++ ++++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~~ 104 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPF-VDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDI--EKAH 104 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHH-HhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCC--CCee
Confidence 4568899999999887666543 4444 45689999999999999985432211111223344455556655 7999
Q ss_pred EEEeccChHHHHHHHHhcC-CccEEEEecchhhhh-----------hhcc-----c-------h---------------h
Q 022700 142 LYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI-----------RVLY-----P-------V---------------K 182 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~-----------~~~~-----~-------~---------------~ 182 (293)
++||||||.+++.++.++| +++++|+++|..... .... + . .
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELL 184 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHH
Confidence 9999999999999999999 599999988632100 0000 0 0 0
Q ss_pred hhhhh---------------------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCC
Q 022700 183 MTLWF---------------------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHC 241 (293)
Q Consensus 183 ~~~~~---------------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 241 (293)
...+. ..++....++++++|+++++|++|.+++.+.++.+.+.+++. ++++++++||.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~-~~~~i~~agH~ 263 (282)
T TIGR03343 185 QGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA-QLHVFSRCGHW 263 (282)
T ss_pred HhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCC-EEEEeCCCCcC
Confidence 00000 001112346788999999999999999999999999988865 88999999999
Q ss_pred CCCCch-HHHHHHHHHHH
Q 022700 242 NLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 242 ~~~~~~-~~~~~i~~fl~ 258 (293)
.+.+.+ ++.+.|.+||.
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 987777 58899999985
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.5e-25 Score=186.58 Aligned_cols=201 Identities=22% Similarity=0.282 Sum_probs=146.7
Q ss_pred CCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC------CCchhhhHHHH
Q 022700 52 NGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS------EFNTYYDIEAV 125 (293)
Q Consensus 52 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~------~~~~~~d~~~~ 125 (293)
+|.++++....+ ++++|||+||++++...|..++..+ .+. |+|+++|+||+|.|+.... .....++..+.
T Consensus 16 ~~~~i~y~~~G~--~~~~vlllHG~~~~~~~w~~~~~~L-~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~ 91 (294)
T PLN02824 16 KGYNIRYQRAGT--SGPALVLVHGFGGNADHWRKNTPVL-AKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQ 91 (294)
T ss_pred cCeEEEEEEcCC--CCCeEEEECCCCCChhHHHHHHHHH-HhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHH
Confidence 567776555432 3589999999999999999999888 443 5899999999999985321 23455666666
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh---------h-------h-ccc--h----
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI---------R-------V-LYP--V---- 181 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~---------~-------~-~~~--~---- 181 (293)
+..+.++.++ ++++++||||||.+++.++.++| +++++|++++..... . . ... .
T Consensus 92 l~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (294)
T PLN02824 92 LNDFCSDVVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAF 169 (294)
T ss_pred HHHHHHHhcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHH
Confidence 6666667665 89999999999999999999999 599999998643110 0 0 000 0
Q ss_pred ---------hhhh----h---------------------------hhcc------cChhhhhcCCCcEEEEecCCCCccC
Q 022700 182 ---------KMTL----W---------------------------FDIY------KNIDKIRHVNCPVLVIHGTNDDIVD 215 (293)
Q Consensus 182 ---------~~~~----~---------------------------~~~~------~~~~~l~~i~~P~l~i~g~~D~~~~ 215 (293)
.... + .+.. .....+.++++|+++|+|++|.+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 249 (294)
T PLN02824 170 FKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEP 249 (294)
T ss_pred HHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCC
Confidence 0000 0 0000 0123466789999999999999999
Q ss_pred hhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHH
Q 022700 216 LSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
.+.++.+.+..+. .++++++++||..+.+.+ ++.+.|.+|+++
T Consensus 250 ~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 250 VELGRAYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred hHHHHHHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9988886665544 488999999999877776 588999999975
No 13
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=5.1e-25 Score=183.44 Aligned_cols=204 Identities=17% Similarity=0.203 Sum_probs=145.7
Q ss_pred cCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHH
Q 022700 51 KNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLK 130 (293)
Q Consensus 51 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~ 130 (293)
.+|.++++.... ++++|||+||++++...|..++..+ .+.+ .|+++|+||+|.|+.... ....++..+.+..+.
T Consensus 14 ~~g~~i~y~~~G---~g~~vvllHG~~~~~~~w~~~~~~L-~~~~-~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll 87 (295)
T PRK03592 14 VLGSRMAYIETG---EGDPIVFLHGNPTSSYLWRNIIPHL-AGLG-RCLAPDLIGMGASDKPDI-DYTFADHARYLDAWF 87 (295)
T ss_pred ECCEEEEEEEeC---CCCEEEEECCCCCCHHHHHHHHHHH-hhCC-EEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHH
Confidence 377777765543 5689999999999999999988888 4444 899999999999985432 334566666666666
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhh-----hh--------hcc-ch------------hh
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG-----IR--------VLY-PV------------KM 183 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~-----~~--------~~~-~~------------~~ 183 (293)
+.+++ ++++++||||||.+++.++..+| +++++|++++.... .. ... +. ..
T Consensus 88 ~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 88 DALGL--DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred HHhCC--CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHh
Confidence 77766 79999999999999999999999 49999999863210 00 000 00 00
Q ss_pred hhh----------------hhccc------------------------------ChhhhhcCCCcEEEEecCCCCccChh
Q 022700 184 TLW----------------FDIYK------------------------------NIDKIRHVNCPVLVIHGTNDDIVDLS 217 (293)
Q Consensus 184 ~~~----------------~~~~~------------------------------~~~~l~~i~~P~l~i~g~~D~~~~~~ 217 (293)
..+ .+.+. ....+.++++|+++|+|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 245 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTG 245 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcH
Confidence 000 00000 01224567999999999999999665
Q ss_pred hHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHhhh
Q 022700 218 HGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAMEK 262 (293)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~~ 262 (293)
...++......+.++.+++++||..+.+.+ ++.+.|.+|+++...
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 246 AIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred HHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 555555443334588899999999977766 588999999987654
No 14
>PLN02965 Probable pheophorbidase
Probab=99.94 E-value=2.2e-25 Score=181.73 Aligned_cols=191 Identities=14% Similarity=0.225 Sum_probs=141.5
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
-.|||+||++.+...|...+..| .+.||.|+++|+||||.|+.........+++.+.+..+.+.++.. ++++++||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L-~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhSm 81 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLL-DAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-HKVILVGHSI 81 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHH-hhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-CCEEEEecCc
Confidence 35999999999998999888888 677899999999999999754333344566666666666666431 4899999999
Q ss_pred ChHHHHHHHHhcC-CccEEEEecchh---h-----hhh-------hc----------cc----hh-hhhhhhc-cc----
Q 022700 148 GSGPTLHLASRLQ-KLRGVVLHSAIL---S-----GIR-------VL----------YP----VK-MTLWFDI-YK---- 191 (293)
Q Consensus 148 Gg~~a~~~a~~~p-~v~~~i~~~p~~---~-----~~~-------~~----------~~----~~-~~~~~~~-~~---- 191 (293)
||.+++.++..+| +|+++|++++.. . ... .. .+ .. ..+.... +.
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL 161 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH
Confidence 9999999999998 599999988641 1 000 00 00 00 0010000 00
Q ss_pred -------------------Ch----hhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-
Q 022700 192 -------------------NI----DKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP- 247 (293)
Q Consensus 192 -------------------~~----~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~- 247 (293)
.. ..+..+++|+++++|++|..+++...+.+.+.+++. ++++++++||..+.+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~ 240 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPT 240 (255)
T ss_pred HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHH
Confidence 00 123368999999999999999999999999999876 78889999999977777
Q ss_pred HHHHHHHHHHHHhh
Q 022700 248 EYIKHLRKFINAME 261 (293)
Q Consensus 248 ~~~~~i~~fl~~~~ 261 (293)
++.+.|.+|++.++
T Consensus 241 ~v~~~l~~~~~~~~ 254 (255)
T PLN02965 241 TLFQYLLQAVSSLQ 254 (255)
T ss_pred HHHHHHHHHHHHhc
Confidence 59999999988764
No 15
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=1.1e-24 Score=186.39 Aligned_cols=216 Identities=23% Similarity=0.295 Sum_probs=158.6
Q ss_pred ceeEEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC----
Q 022700 43 MDCHLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF---- 116 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~---- 116 (293)
.....+...++..+.+..|.+. ..+++||++||++++...|..+...+ .+.||.|+++|+||||.|++.....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L-~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQL-TSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHH-HHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 5566777888889998888764 35689999999999888888888877 7789999999999999998643322
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC----CccEEEEecchhhhhhh-------------cc
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ----KLRGVVLHSAILSGIRV-------------LY 179 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~i~~~p~~~~~~~-------------~~ 179 (293)
...+|+..+++++.... +..+++++||||||.+++.++. +| +++++|+.+|+...... ..
T Consensus 189 ~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 189 YVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 23467777777776554 2358999999999999998765 44 48999999986431100 00
Q ss_pred c-------------hh------hhhhhhc---------------cc----ChhhhhcCCCcEEEEecCCCCccChhhHHH
Q 022700 180 P-------------VK------MTLWFDI---------------YK----NIDKIRHVNCPVLVIHGTNDDIVDLSHGKR 221 (293)
Q Consensus 180 ~-------------~~------~~~~~~~---------------~~----~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~ 221 (293)
+ .. ...+.+. .. ....+.++++|+|+++|++|.+++++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 0 00 0000000 00 013346789999999999999999999999
Q ss_pred HHHHhcC-CcceEEecCCCCCCCCC--chHHHHHHHHHHHHhhh
Q 022700 222 LWELSKE-KYDPLWVKGGGHCNLET--YPEYIKHLRKFINAMEK 262 (293)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~H~~~~~--~~~~~~~i~~fl~~~~~ 262 (293)
+++.+.. ..++.++++++|..+.+ .+++.+.+.+||.....
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9998764 45888999999997554 34699999999997653
No 16
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=1.2e-24 Score=187.52 Aligned_cols=217 Identities=13% Similarity=0.087 Sum_probs=155.3
Q ss_pred CCCceeEEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChh-hHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC
Q 022700 40 DKNMDCHLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLG-QMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF 116 (293)
Q Consensus 40 ~~~~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~-~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~ 116 (293)
...++.+.+...+|..+.++++.|. ++.|+||+.||+++... .|......+ .+.||+|+++|+||+|.|.+.....
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~L-a~~Gy~vl~~D~pG~G~s~~~~~~~ 243 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYL-APRGIAMLTIDMPSVGFSSKWKLTQ 243 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHH-HhCCCEEEEECCCCCCCCCCCCccc
Confidence 3468899999989988999888664 35678887777776543 455545555 8899999999999999997543222
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh-------ccchhhhhhh-
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV-------LYPVKMTLWF- 187 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~-------~~~~~~~~~~- 187 (293)
........+++++.....++.++|+++||||||.+++.+|...| +++++|+++|....... ........+.
T Consensus 244 d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~ 323 (414)
T PRK05077 244 DSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLAS 323 (414)
T ss_pred cHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHH
Confidence 23333457788887776667789999999999999999999888 69999999987642110 0000000000
Q ss_pred ----------------hccc--Chhhh-hcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchH
Q 022700 188 ----------------DIYK--NIDKI-RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPE 248 (293)
Q Consensus 188 ----------------~~~~--~~~~l-~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 248 (293)
..+. ....+ .++++|+|+++|++|.++|.+.++.+.+..++. ++++++++.| .+..++
T Consensus 324 ~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~-~l~~i~~~~~--~e~~~~ 400 (414)
T PRK05077 324 RLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG-KLLEIPFKPV--YRNFDK 400 (414)
T ss_pred HhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC-eEEEccCCCc--cCCHHH
Confidence 0010 01112 468899999999999999999999888777654 8889998632 234457
Q ss_pred HHHHHHHHHHHh
Q 022700 249 YIKHLRKFINAM 260 (293)
Q Consensus 249 ~~~~i~~fl~~~ 260 (293)
+.+.+.+||++.
T Consensus 401 ~~~~i~~wL~~~ 412 (414)
T PRK05077 401 ALQEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.94 E-value=4e-25 Score=180.00 Aligned_cols=189 Identities=21% Similarity=0.262 Sum_probs=140.4
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
.++|+||++||++++...|...+..+ . .+|+|+++|+||+|.|..........++..+.+..+.++.+. ++++++|
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~G 86 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVL-T-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI--ERFHFVG 86 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHH-H-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC--CcEEEEE
Confidence 35789999999999998888877666 3 479999999999999986544444556665566666666654 7899999
Q ss_pred eccChHHHHHHHHhcC-CccEEEEecchhhhhhh-----------ccch--------h-----hhhhh------------
Q 022700 145 QSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV-----------LYPV--------K-----MTLWF------------ 187 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~-----------~~~~--------~-----~~~~~------------ 187 (293)
|||||.+++.++..+| .++++|+++++...... +... . ...|.
T Consensus 87 ~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
T TIGR03611 87 HALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEA 166 (257)
T ss_pred echhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhh
Confidence 9999999999999988 49999998864321000 0000 0 00000
Q ss_pred -------------------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-
Q 022700 188 -------------------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP- 247 (293)
Q Consensus 188 -------------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~- 247 (293)
..++....+.++++|+++++|++|.+++++.++.+++.+++. +++.++++||....+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~ 245 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPE 245 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHH
Confidence 011123446678999999999999999999999999888765 78889999999866666
Q ss_pred HHHHHHHHHHH
Q 022700 248 EYIKHLRKFIN 258 (293)
Q Consensus 248 ~~~~~i~~fl~ 258 (293)
++.+.|.+||+
T Consensus 246 ~~~~~i~~fl~ 256 (257)
T TIGR03611 246 TFNRALLDFLK 256 (257)
T ss_pred HHHHHHHHHhc
Confidence 58899999985
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=1.1e-24 Score=179.85 Aligned_cols=203 Identities=22% Similarity=0.154 Sum_probs=147.6
Q ss_pred ccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHH
Q 022700 50 TKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCL 129 (293)
Q Consensus 50 ~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l 129 (293)
..+|..+++...+ +..+|+|||+||++++...|..++..+ .+ +|+|+++|+||+|.|.........+++..+.+..+
T Consensus 12 ~~~~~~~~~~~~g-~~~~~~vv~~hG~~~~~~~~~~~~~~l-~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~ 88 (278)
T TIGR03056 12 TVGPFHWHVQDMG-PTAGPLLLLLHGTGASTHSWRDLMPPL-AR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSAL 88 (278)
T ss_pred eECCEEEEEEecC-CCCCCeEEEEcCCCCCHHHHHHHHHHH-hh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHH
Confidence 3366777654443 234689999999999999999888877 33 69999999999999985444344566767777777
Q ss_pred HHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhh----c----------cchh------------
Q 022700 130 KREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRV----L----------YPVK------------ 182 (293)
Q Consensus 130 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~----~----------~~~~------------ 182 (293)
.++.++ ++++++||||||.+++.++..+|. +++++++++....... . .+..
T Consensus 89 i~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (278)
T TIGR03056 89 CAAEGL--SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQ 166 (278)
T ss_pred HHHcCC--CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCc
Confidence 777655 789999999999999999999995 8999988764321000 0 0000
Q ss_pred -----------------hhhhhhcc----------------c---ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHh
Q 022700 183 -----------------MTLWFDIY----------------K---NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELS 226 (293)
Q Consensus 183 -----------------~~~~~~~~----------------~---~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~ 226 (293)
..++.+.+ . ....++++++|+++++|++|..++.+..+.+.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~ 246 (278)
T TIGR03056 167 RVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV 246 (278)
T ss_pred chhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc
Confidence 00000000 0 01235567899999999999999999988888887
Q ss_pred cCCcceEEecCCCCCCCCCch-HHHHHHHHHHH
Q 022700 227 KEKYDPLWVKGGGHCNLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 227 ~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~ 258 (293)
++. +++.++++||..+.+.+ ++.+.|.+|++
T Consensus 247 ~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 247 PTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 764 88899999999876666 68899999974
No 19
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=1.4e-24 Score=178.99 Aligned_cols=219 Identities=21% Similarity=0.288 Sum_probs=161.6
Q ss_pred CceeEEEEccCCCEEEEEEEeCCCCc-eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC-CCCCCCchh
Q 022700 42 NMDCHLLETKNGNKIVATFWRHPFAR-FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST-GKPSEFNTY 119 (293)
Q Consensus 42 ~~~~~~~~~~~g~~l~~~~~~~~~~~-~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~-~~~~~~~~~ 119 (293)
...+..+...||..+.+..+.++.+. .+||++||.+.+...|..++..+ ...||.|+++|+||||.|. +.......+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l-~~~G~~V~~~D~RGhG~S~r~~rg~~~~f 86 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDL-AARGFDVYALDLRGHGRSPRGQRGHVDSF 86 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHH-HhCCCEEEEecCCCCCCCCCCCcCCchhH
Confidence 34455778889999999999877554 89999999999999999988888 8899999999999999997 555444445
Q ss_pred hhHHHHHHHHHHHhc--CCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh--hc----------------
Q 022700 120 YDIEAVYNCLKREYN--VKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR--VL---------------- 178 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~--~~---------------- 178 (293)
.+....++.+.+... ....+++++||||||.+++.++.+++ .++++|+.+|++.... ..
T Consensus 87 ~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p 166 (298)
T COG2267 87 ADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRP 166 (298)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccccccc
Confidence 544444444444332 13469999999999999999999998 6999999999765431 00
Q ss_pred -cchhh-------hhhh-------hccc-------------------------ChhhhhcCCCcEEEEecCCCCccC-hh
Q 022700 179 -YPVKM-------TLWF-------DIYK-------------------------NIDKIRHVNCPVLVIHGTNDDIVD-LS 217 (293)
Q Consensus 179 -~~~~~-------~~~~-------~~~~-------------------------~~~~l~~i~~P~l~i~g~~D~~~~-~~ 217 (293)
..... ..+. +.+. .......+++|+|+++|++|.+++ .+
T Consensus 167 ~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~ 246 (298)
T COG2267 167 KLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVE 246 (298)
T ss_pred ccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcH
Confidence 00000 0000 0000 011234568999999999999999 68
Q ss_pred hHHHHHHHhcCC-cceEEecCCCCCCCCCch----HHHHHHHHHHHHhh
Q 022700 218 HGKRLWELSKEK-YDPLWVKGGGHCNLETYP----EYIKHLRKFINAME 261 (293)
Q Consensus 218 ~~~~~~~~~~~~-~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~~ 261 (293)
...+++++++.. .++++++|+.|..+.+.+ ++.+.+.+|+.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 247 GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 888888888764 588999999999876654 46777888887654
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.93 E-value=2.6e-24 Score=178.00 Aligned_cols=204 Identities=21% Similarity=0.252 Sum_probs=143.2
Q ss_pred cCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC--chhhhHHHHHHH
Q 022700 51 KNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF--NTYYDIEAVYNC 128 (293)
Q Consensus 51 ~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~--~~~~d~~~~i~~ 128 (293)
.++..+.+....+++.+++|||+||++++...|...+..++.+.||.|+++|+||+|.|....... ...+++.+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 9 VDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEE 88 (288)
T ss_pred CCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHH
Confidence 345555555554445578999999987766666666666656679999999999999987543222 345666666777
Q ss_pred HHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh----------hccc-----------------
Q 022700 129 LKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR----------VLYP----------------- 180 (293)
Q Consensus 129 l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~----------~~~~----------------- 180 (293)
+.++.+. ++++++||||||.+++.++..+| ++++++++++...... ....
T Consensus 89 ~~~~~~~--~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (288)
T TIGR01250 89 VREKLGL--DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDN 166 (288)
T ss_pred HHHHcCC--CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcch
Confidence 7777765 67999999999999999999999 4999999876422100 0000
Q ss_pred -----hhhhhh--------------h--------------------------hcccChhhhhcCCCcEEEEecCCCCccC
Q 022700 181 -----VKMTLW--------------F--------------------------DIYKNIDKIRHVNCPVLVIHGTNDDIVD 215 (293)
Q Consensus 181 -----~~~~~~--------------~--------------------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~ 215 (293)
....+. . ..++....+.++++|+++++|++|.+ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~ 245 (288)
T TIGR01250 167 PEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-T 245 (288)
T ss_pred HHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-C
Confidence 000000 0 00011234567899999999999985 6
Q ss_pred hhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHH
Q 022700 216 LSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~ 258 (293)
+...+.+.+.+++. ++++++++||..+.+.+ ++.+.|.+||+
T Consensus 246 ~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 246 PEAAREMQELIAGS-RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHHhccCC-eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 67777777777665 78899999999877766 68899999873
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=3.1e-24 Score=177.60 Aligned_cols=208 Identities=16% Similarity=0.167 Sum_probs=147.0
Q ss_pred CCceeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhh
Q 022700 41 KNMDCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYY 120 (293)
Q Consensus 41 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~ 120 (293)
.+++...++. +|.++++... +.+++|||+||++.+...|...+..+ . .+|+|+++|+||+|.|+.........+
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~---G~~~~iv~lHG~~~~~~~~~~~~~~l-~-~~~~vi~~D~~G~G~S~~~~~~~~~~~ 85 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDE---GTGPPILLCHGNPTWSFLYRDIIVAL-R-DRFRCVAPDYLGFGLSERPSGFGYQID 85 (286)
T ss_pred ccccceEEEc-CCcEEEEEEC---CCCCEEEEECCCCccHHHHHHHHHHH-h-CCcEEEEECCCCCCCCCCCCccccCHH
Confidence 4455556666 5667765443 35689999999998888888888777 3 359999999999999975433334567
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh--------h-c--cchhh-----
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR--------V-L--YPVKM----- 183 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~--------~-~--~~~~~----- 183 (293)
+..+.+..+.+++++ ++++++||||||.+++.++..+| +++++|++++...... . . .+...
T Consensus 86 ~~~~~~~~~~~~~~~--~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (286)
T PRK03204 86 EHARVIGEFVDHLGL--DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRR 163 (286)
T ss_pred HHHHHHHHHHHHhCC--CCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhh
Confidence 888888888888766 78999999999999999999998 5999998876421000 0 0 00000
Q ss_pred hhhhh---------------------c----------------cc-Ch---hhh----hc--CCCcEEEEecCCCCccCh
Q 022700 184 TLWFD---------------------I----------------YK-NI---DKI----RH--VNCPVLVIHGTNDDIVDL 216 (293)
Q Consensus 184 ~~~~~---------------------~----------------~~-~~---~~l----~~--i~~P~l~i~g~~D~~~~~ 216 (293)
.++.+ . +. .. ..+ .. +++|+++|+|++|.++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~ 243 (286)
T PRK03204 164 NFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRP 243 (286)
T ss_pred hHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCc
Confidence 00000 0 00 00 001 11 179999999999998865
Q ss_pred h-hHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHH
Q 022700 217 S-HGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFI 257 (293)
Q Consensus 217 ~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl 257 (293)
. ..+.+.+.+++. ++++++++||..+.+.+ ++.+.|.+||
T Consensus 244 ~~~~~~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 244 KTILPRLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHHHHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 5 456777778775 88999999999988877 5888899887
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.93 E-value=3.6e-24 Score=185.57 Aligned_cols=210 Identities=15% Similarity=0.247 Sum_probs=148.9
Q ss_pred EEEccCCCEEEEEEEeCCC--CceEEEEEcCCCCChhhHHHH-HHHHH--hhcCeeEEEEccccccCCCCCCCCCchhhh
Q 022700 47 LLETKNGNKIVATFWRHPF--ARFTLLYSHGNAADLGQMLEL-FIELR--AHLRVNIMSYDYSGYGASTGKPSEFNTYYD 121 (293)
Q Consensus 47 ~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-~~~~~--~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d 121 (293)
.+.+.+|.++++....+++ .+++|||+||++++...|... +..+. .+.+|.|+++|+||||.|+........+++
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 3444456788887777654 358999999999999888753 34442 246899999999999999754333344555
Q ss_pred HHHHH-HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhh----------------hccch--
Q 022700 122 IEAVY-NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIR----------------VLYPV-- 181 (293)
Q Consensus 122 ~~~~i-~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~----------------~~~~~-- 181 (293)
..+.+ ..+.+..++ ++++++||||||.+++.++.++|+ ++++|+++|...... ...+.
T Consensus 259 ~a~~l~~~ll~~lg~--~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (481)
T PLN03087 259 HLEMIERSVLERYKV--KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIA 336 (481)
T ss_pred HHHHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccc
Confidence 55555 356677766 799999999999999999999994 999999986321000 00000
Q ss_pred --------h----h--------------------------hhhhhcc-----c-C------------------hhh-hhc
Q 022700 182 --------K----M--------------------------TLWFDIY-----K-N------------------IDK-IRH 198 (293)
Q Consensus 182 --------~----~--------------------------~~~~~~~-----~-~------------------~~~-l~~ 198 (293)
. . .+..+.+ . . ... ..+
T Consensus 337 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~ 416 (481)
T PLN03087 337 FGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQ 416 (481)
T ss_pred cchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHh
Confidence 0 0 0000000 0 0 001 126
Q ss_pred CCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCC-Cch-HHHHHHHHHHHH
Q 022700 199 VNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLE-TYP-EYIKHLRKFINA 259 (293)
Q Consensus 199 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-~~~-~~~~~i~~fl~~ 259 (293)
+++|+|+++|++|.++|++..+.+.+.+++. ++++++++||..+. +.+ ++.+.|.+|+++
T Consensus 417 I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a-~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVECSYAVKAKVPRA-RVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHhCCCC-EEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 8999999999999999999999999999875 89999999999753 444 699999999865
No 23
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.93 E-value=3.8e-24 Score=171.44 Aligned_cols=210 Identities=19% Similarity=0.241 Sum_probs=154.2
Q ss_pred EEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhHHHHH
Q 022700 48 LETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDIEAVY 126 (293)
Q Consensus 48 ~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~~~~i 126 (293)
+.+-+|..+++.. ..++.+|+|+++||+...+..|+..+..+ +..||+|+++|+||+|.|+.+.. ..+....+...+
T Consensus 26 ~~~~~gI~~h~~e-~g~~~gP~illlHGfPe~wyswr~q~~~l-a~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di 103 (322)
T KOG4178|consen 26 FVTYKGIRLHYVE-GGPGDGPIVLLLHGFPESWYSWRHQIPGL-ASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDI 103 (322)
T ss_pred eEEEccEEEEEEe-ecCCCCCEEEEEccCCccchhhhhhhhhh-hhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHH
Confidence 3334554443322 24568999999999999999999999999 78889999999999999996655 456667777788
Q ss_pred HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh-----hhhh-----------------------
Q 022700 127 NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS-----GIRV----------------------- 177 (293)
Q Consensus 127 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~-----~~~~----------------------- 177 (293)
..+.+.++. +++.++||+||+.+|+.++..+| +++++++++.... ....
T Consensus 104 ~~lld~Lg~--~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~ 181 (322)
T KOG4178|consen 104 VALLDHLGL--KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETE 181 (322)
T ss_pred HHHHHHhcc--ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhh
Confidence 888888886 89999999999999999999999 5999998864221 0000
Q ss_pred ----------------------ccc------------hhhhhhh----------------hcccC----hhhhhcCCCcE
Q 022700 178 ----------------------LYP------------VKMTLWF----------------DIYKN----IDKIRHVNCPV 203 (293)
Q Consensus 178 ----------------------~~~------------~~~~~~~----------------~~~~~----~~~l~~i~~P~ 203 (293)
..+ ....++. +.... .-.+.++++|+
T Consensus 182 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv 261 (322)
T KOG4178|consen 182 LSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPV 261 (322)
T ss_pred hccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccce
Confidence 000 0000000 01111 12345678999
Q ss_pred EEEecCCCCccChh-hHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHhh
Q 022700 204 LVIHGTNDDIVDLS-HGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 204 l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~ 261 (293)
++++|+.|.+.+.. ..+.+.+.++...+.++++++||+...+.+ ++.+.+.+|+++..
T Consensus 262 ~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 262 LFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred EEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 99999999998876 334444455665578899999999977777 69999999998754
No 24
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=3.7e-24 Score=182.49 Aligned_cols=204 Identities=23% Similarity=0.269 Sum_probs=141.6
Q ss_pred CCC-EEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHH
Q 022700 52 NGN-KIVATFWRHP---FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYN 127 (293)
Q Consensus 52 ~g~-~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~ 127 (293)
+|. ++++....+. ..+|+|||+||++++...|..++..+ .+ +|.|+++|+||||.|+.........++..+.+.
T Consensus 69 ~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L-~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 69 KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVL-AK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHH-hc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 344 6765544321 13588999999999999999998877 44 799999999999999754333334555555565
Q ss_pred HHHHHhcCCCccEEEEEeccChHHHHHHHHh-cC-CccEEEEecchhhh--------hhh--cc------------c-h-
Q 022700 128 CLKREYNVKQEELILYGQSVGSGPTLHLASR-LQ-KLRGVVLHSAILSG--------IRV--LY------------P-V- 181 (293)
Q Consensus 128 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p-~v~~~i~~~p~~~~--------~~~--~~------------~-~- 181 (293)
.+.+.+++ ++++|+||||||.+++.++.. +| +|+++|++++.... ... .. + .
T Consensus 147 ~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (360)
T PLN02679 147 DFLEEVVQ--KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIA 224 (360)
T ss_pred HHHHHhcC--CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhH
Confidence 55666655 799999999999999988874 56 59999999863210 000 00 0 0
Q ss_pred ------------hhhhh--------------hh-----------------c------ccChhhhhcCCCcEEEEecCCCC
Q 022700 182 ------------KMTLW--------------FD-----------------I------YKNIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 182 ------------~~~~~--------------~~-----------------~------~~~~~~l~~i~~P~l~i~g~~D~ 212 (293)
....+ .+ . .+....+.++++|+|+++|++|.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~ 304 (360)
T PLN02679 225 SALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDP 304 (360)
T ss_pred HHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCC
Confidence 00000 00 0 00123456789999999999999
Q ss_pred ccChhhH-----HHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHh
Q 022700 213 IVDLSHG-----KRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAM 260 (293)
Q Consensus 213 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~ 260 (293)
++|.+.. +.+.+.+++ .++++++++||..+.+.+ ++.+.|.+||.+.
T Consensus 305 ~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 305 FTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 9988642 234444555 488899999999987777 5889999999864
No 25
>PRK10566 esterase; Provisional
Probab=99.93 E-value=5.1e-24 Score=173.14 Aligned_cols=191 Identities=19% Similarity=0.267 Sum_probs=134.5
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC----------chhhhHHHHHHHHHHHhcC
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF----------NTYYDIEAVYNCLKREYNV 135 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~----------~~~~d~~~~i~~l~~~~~~ 135 (293)
+.|+||++||++++...|..+...+ .+.||.|+++|+||+|.+....... ...+|+.++++++.++..+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l-~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVAL-AQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHH-HhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4689999999999887787777777 7789999999999999763211110 1235667778888776556
Q ss_pred CCccEEEEEeccChHHHHHHHHhcCCccEEEEe-c-chhhhh-hhccchh-------hh----h--hhhcccChhhhhcC
Q 022700 136 KQEELILYGQSVGSGPTLHLASRLQKLRGVVLH-S-AILSGI-RVLYPVK-------MT----L--WFDIYKNIDKIRHV 199 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~-~-p~~~~~-~~~~~~~-------~~----~--~~~~~~~~~~l~~i 199 (293)
+.++++++|||+||.+++.++...|++.+.+.+ + +..... ....+.. .. + ....++....+.++
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 184 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQL 184 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhc
Confidence 778999999999999999999999886655433 2 222111 0000000 00 0 01122333445565
Q ss_pred -CCcEEEEecCCCCccChhhHHHHHHHhcCC-----cceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 200 -NCPVLVIHGTNDDIVDLSHGKRLWELSKEK-----YDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 200 -~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
++|+|+++|++|.+++++.++.+++.++.. .++..+++++|... ++..+.+.+||++.
T Consensus 185 ~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~fl~~~ 248 (249)
T PRK10566 185 ADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVAFFRQH 248 (249)
T ss_pred CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHHHHHhh
Confidence 689999999999999999999999888542 35667899999753 56788999999853
No 26
>PRK06489 hypothetical protein; Provisional
Probab=99.93 E-value=6.7e-24 Score=181.18 Aligned_cols=208 Identities=18% Similarity=0.183 Sum_probs=142.1
Q ss_pred cCCCEEEEEEEeCCCC-------ceEEEEEcCCCCChhhHH--HHHHHHH------hhcCeeEEEEccccccCCCCCCCC
Q 022700 51 KNGNKIVATFWRHPFA-------RFTLLYSHGNAADLGQML--ELFIELR------AHLRVNIMSYDYSGYGASTGKPSE 115 (293)
Q Consensus 51 ~~g~~l~~~~~~~~~~-------~~~vv~~hG~~~~~~~~~--~~~~~~~------~~~g~~v~~~d~~g~G~s~~~~~~ 115 (293)
.+|.++++..++. +. +|+|||+||++++...|. .+...+. ...+|.|+++|+||||.|+.....
T Consensus 47 ~~g~~i~y~~~G~-~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGT-PHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCC-CCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 4566776655542 22 689999999999887775 3333331 246799999999999999743221
Q ss_pred ------CchhhhHHH-HHHHHHHHhcCCCccEE-EEEeccChHHHHHHHHhcC-CccEEEEecchhhh-------hhh--
Q 022700 116 ------FNTYYDIEA-VYNCLKREYNVKQEELI-LYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG-------IRV-- 177 (293)
Q Consensus 116 ------~~~~~d~~~-~i~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~-------~~~-- 177 (293)
...++++.+ ++..+.+++++ ++++ ++||||||.+|+.++.++| +++++|++++.... ...
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi--~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~ 203 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGV--KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRML 203 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCC--CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHH
Confidence 123455543 34446677776 6775 8999999999999999999 59999998763210 000
Q ss_pred -------------cc---c-h-------h---------------------hhhhhh---------------------ccc
Q 022700 178 -------------LY---P-V-------K---------------------MTLWFD---------------------IYK 191 (293)
Q Consensus 178 -------------~~---~-~-------~---------------------~~~~~~---------------------~~~ 191 (293)
.. + . . ...+.. .++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 283 (360)
T PRK06489 204 IESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYN 283 (360)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccC
Confidence 00 0 0 0 000000 011
Q ss_pred ChhhhhcCCCcEEEEecCCCCccChhhH--HHHHHHhcCCcceEEecCC----CCCCCCCchHHHHHHHHHHHHhhh
Q 022700 192 NIDKIRHVNCPVLVIHGTNDDIVDLSHG--KRLWELSKEKYDPLWVKGG----GHCNLETYPEYIKHLRKFINAMEK 262 (293)
Q Consensus 192 ~~~~l~~i~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~H~~~~~~~~~~~~i~~fl~~~~~ 262 (293)
..+.+.++++|+|+|+|++|.+++.+.+ +.+.+.+++. ++++++++ ||..+++.+++.+.|.+||+++.+
T Consensus 284 ~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a-~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 284 PSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHG-RLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred hHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCC-eEEEECCCCCCCCcccccCHHHHHHHHHHHHHhccc
Confidence 1334678899999999999999998875 6788888775 89999986 999875434699999999987653
No 27
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.92 E-value=4.5e-24 Score=172.78 Aligned_cols=195 Identities=19% Similarity=0.212 Sum_probs=139.6
Q ss_pred EEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCC
Q 022700 58 ATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQ 137 (293)
Q Consensus 58 ~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~ 137 (293)
+....+++.+|+||++||++.+...|...+..+ . .||.|+++|+||+|.|.... .....++..+.+..+.+..+.
T Consensus 4 ~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l-~-~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~-- 78 (251)
T TIGR02427 4 YRLDGAADGAPVLVFINSLGTDLRMWDPVLPAL-T-PDFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGI-- 78 (251)
T ss_pred EEeecCCCCCCeEEEEcCcccchhhHHHHHHHh-h-cccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC--
Confidence 333333336789999999999998888887776 3 58999999999999986433 233455666666666666654
Q ss_pred ccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh-----h---------ccc----hhhh--------------
Q 022700 138 EELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR-----V---------LYP----VKMT-------------- 184 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~-----~---------~~~----~~~~-------------- 184 (293)
++++++|||+||.+++.+|...| ++++++++++...... . ... ....
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 78999999999999999999987 5888888875321000 0 000 0000
Q ss_pred -hhh------------------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCC
Q 022700 185 -LWF------------------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLET 245 (293)
Q Consensus 185 -~~~------------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 245 (293)
.+. ...+....+.++++|+++++|++|.+++.+..+.+.+.+++. ++++++++||..+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~ 237 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGA-RFAEIRGAGHIPCVE 237 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCc-eEEEECCCCCccccc
Confidence 000 001112345678899999999999999999888888888764 888999999998766
Q ss_pred ch-HHHHHHHHHHH
Q 022700 246 YP-EYIKHLRKFIN 258 (293)
Q Consensus 246 ~~-~~~~~i~~fl~ 258 (293)
.+ ++.+.+.+|++
T Consensus 238 ~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 238 QPEAFNAALRDFLR 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 66 58888888873
No 28
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=1.1e-23 Score=175.43 Aligned_cols=216 Identities=22% Similarity=0.279 Sum_probs=155.0
Q ss_pred CceeEEEEccCCC-EEEEEEEeCC--------CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC-C
Q 022700 42 NMDCHLLETKNGN-KIVATFWRHP--------FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST-G 111 (293)
Q Consensus 42 ~~~~~~~~~~~g~-~l~~~~~~~~--------~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~-~ 111 (293)
.++...+....|. .+...+++.. ..++.||++||++++...|...+..+....|+.|+++|++|+|.++ .
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCC
Confidence 4455556666663 4444455444 3789999999999999999999999877778999999999999544 3
Q ss_pred CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEE---Eecchhhhhhh----------
Q 022700 112 KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVV---LHSAILSGIRV---------- 177 (293)
Q Consensus 112 ~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i---~~~p~~~~~~~---------- 177 (293)
+........+....+..+..+... ++++++|||+||.+|+.+|+.+|. +++++ ++++.......
T Consensus 104 ~~~~~y~~~~~v~~i~~~~~~~~~--~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 181 (326)
T KOG1454|consen 104 PRGPLYTLRELVELIRRFVKEVFV--EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLD 181 (326)
T ss_pred CCCCceehhHHHHHHHHHHHhhcC--cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhh
Confidence 333445556666666666556554 679999999999999999999995 89999 55542210000
Q ss_pred --------ccchh---------------------------------------hhhhhh----c--------ccChhhhhc
Q 022700 178 --------LYPVK---------------------------------------MTLWFD----I--------YKNIDKIRH 198 (293)
Q Consensus 178 --------~~~~~---------------------------------------~~~~~~----~--------~~~~~~l~~ 198 (293)
..+.. ..++.+ . ......+.+
T Consensus 182 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (326)
T KOG1454|consen 182 KFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKK 261 (326)
T ss_pred hhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhcc
Confidence 00000 000000 0 111234456
Q ss_pred CC-CcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHh
Q 022700 199 VN-CPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAM 260 (293)
Q Consensus 199 i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~ 260 (293)
+. +|+++++|++|.++|.+.+..+.+.++ +.++++++++||..+.+.| ++.+.|..|+...
T Consensus 262 i~~~pvlii~G~~D~~~p~~~~~~~~~~~p-n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 262 IWKCPVLIIWGDKDQIVPLELAEELKKKLP-NAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred ccCCceEEEEcCcCCccCHHHHHHHHhhCC-CceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 66 999999999999999999999999884 4599999999999988777 5889999999865
No 29
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.92 E-value=1.1e-23 Score=171.87 Aligned_cols=188 Identities=18% Similarity=0.239 Sum_probs=136.6
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
.++|+|||+||++++...|..++..+. .+|.|+++|+||||.|.... ...+++..+.+..+.+.++. ++++++|
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~--~~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~~--~~~~lvG 87 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV--NDHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQI--EKATFIG 87 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh--hCCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCC--CceEEEE
Confidence 467999999999999988888888773 36899999999999998532 23445555555555566655 7899999
Q ss_pred eccChHHHHHHHHhcC-CccEEEEecchhhhh------------hhc----cc-h---------------hhhhhhhc--
Q 022700 145 QSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI------------RVL----YP-V---------------KMTLWFDI-- 189 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~------------~~~----~~-~---------------~~~~~~~~-- 189 (293)
|||||.+++.++..+| +|+++|++++..... ... .. . ...+....
T Consensus 88 hS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T PRK10673 88 HSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFV 167 (255)
T ss_pred ECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCC
Confidence 9999999999999998 599999975321000 000 00 0 00000000
Q ss_pred --------------cc---ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHH
Q 022700 190 --------------YK---NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIK 251 (293)
Q Consensus 190 --------------~~---~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~ 251 (293)
+. ....+..+++|+|+++|++|..++.+..+.+.+.+++. ++.+++++||....+.+ ++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~ 246 (255)
T PRK10673 168 DGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPDAVLR 246 (255)
T ss_pred cceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHHHHHH
Confidence 00 01123466899999999999999999888888888765 88899999999877777 5889
Q ss_pred HHHHHHHH
Q 022700 252 HLRKFINA 259 (293)
Q Consensus 252 ~i~~fl~~ 259 (293)
.|.+||..
T Consensus 247 ~l~~fl~~ 254 (255)
T PRK10673 247 AIRRYLND 254 (255)
T ss_pred HHHHHHhc
Confidence 99999974
No 30
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.92 E-value=1.3e-23 Score=171.50 Aligned_cols=180 Identities=16% Similarity=0.158 Sum_probs=130.9
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
|+|||+||++++...|..++..+ .+ .|.|+++|+||||.|.... . .. +.+.++.+.+ ..+ ++++++||||
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~~L-~~-~~~vi~~Dl~G~G~S~~~~-~-~~---~~~~~~~l~~-~~~--~~~~lvGhS~ 83 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDEEL-SS-HFTLHLVDLPGFGRSRGFG-A-LS---LADMAEAVLQ-QAP--DKAIWLGWSL 83 (256)
T ss_pred CeEEEECCCCCChhHHHHHHHHH-hc-CCEEEEecCCCCCCCCCCC-C-CC---HHHHHHHHHh-cCC--CCeEEEEECH
Confidence 46999999999999999988888 43 4999999999999997432 2 22 3334444443 333 7899999999
Q ss_pred ChHHHHHHHHhcC-CccEEEEecchhhhhh-------------h----c---c-chhhhhh-----------------h-
Q 022700 148 GSGPTLHLASRLQ-KLRGVVLHSAILSGIR-------------V----L---Y-PVKMTLW-----------------F- 187 (293)
Q Consensus 148 Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~-------------~----~---~-~~~~~~~-----------------~- 187 (293)
||.+++.+|..+| +++++|++++...... . . . .....+. .
T Consensus 84 Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK10349 84 GGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKK 163 (256)
T ss_pred HHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 9999999999988 5999999876321000 0 0 0 0000000 0
Q ss_pred --------------------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch
Q 022700 188 --------------------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP 247 (293)
Q Consensus 188 --------------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 247 (293)
..++....+.++++|+++++|++|.+++.+.++.+.+.+++. ++.+++++||..+.+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~-~~~~i~~~gH~~~~e~p 242 (256)
T PRK10349 164 TVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHS-ESYIFAKAAHAPFISHP 242 (256)
T ss_pred HhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCC-eEEEeCCCCCCccccCH
Confidence 001123456778999999999999999999888888888765 89999999999988777
Q ss_pred -HHHHHHHHHHH
Q 022700 248 -EYIKHLRKFIN 258 (293)
Q Consensus 248 -~~~~~i~~fl~ 258 (293)
++.+.+.+|-.
T Consensus 243 ~~f~~~l~~~~~ 254 (256)
T PRK10349 243 AEFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHHhc
Confidence 58888887754
No 31
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=3.1e-23 Score=166.70 Aligned_cols=212 Identities=20% Similarity=0.287 Sum_probs=147.9
Q ss_pred ceeEEEEccCCCEEEEEEEeCC-CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCch---
Q 022700 43 MDCHLLETKNGNKIVATFWRHP-FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNT--- 118 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~--- 118 (293)
++...+...++..+......+. ..+.++||+||+|+....|...+..++. ..+|+++|++|+|.|+.+.-..+.
T Consensus 65 ~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~ 142 (365)
T KOG4409|consen 65 YSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTA 142 (365)
T ss_pred cceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccc
Confidence 3344444556666655554444 4678999999999999999999999955 677999999999999865443322
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh--------------------
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV-------------------- 177 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~-------------------- 177 (293)
...+.+.++.-+...++ ++.+|+|||+||+++..+|.++| +|+.+||++|+--..+.
T Consensus 143 e~~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLV 220 (365)
T ss_pred hHHHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhh
Confidence 24566667777777877 89999999999999999999999 59999999984321100
Q ss_pred ------------ccchhh--------------------hh----hhhc--------------cc--------ChhhhhcC
Q 022700 178 ------------LYPVKM--------------------TL----WFDI--------------YK--------NIDKIRHV 199 (293)
Q Consensus 178 ------------~~~~~~--------------------~~----~~~~--------------~~--------~~~~l~~i 199 (293)
+-+... .+ .... +. -.+.+..+
T Consensus 221 ~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l 300 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL 300 (365)
T ss_pred hhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh
Confidence 000000 00 0000 00 02333444
Q ss_pred C--CcEEEEecCCCCccChhhHHHHHHH-hcCCcceEEecCCCCCCCCCchH-HHHHHHHHHHH
Q 022700 200 N--CPVLVIHGTNDDIVDLSHGKRLWEL-SKEKYDPLWVKGGGHCNLETYPE-YIKHLRKFINA 259 (293)
Q Consensus 200 ~--~P~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~~~~~-~~~~i~~fl~~ 259 (293)
+ +|+++|+|++|.+ +......+... ....++.++++++||....++++ |.+.+.+++++
T Consensus 301 ~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 301 KKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 4 9999999998865 56666666554 34446899999999998877775 88888888765
No 32
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=9.8e-24 Score=158.63 Aligned_cols=188 Identities=19% Similarity=0.253 Sum_probs=145.1
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCC---CCCCCchhhhHHHHHHHHHHHhcCCCccEEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTG---KPSEFNTYYDIEAVYNCLKREYNVKQEELIL 142 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~---~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l 142 (293)
.+..|+++||+.++..+.+.+...+ .+.||.|.+|.+||||..+. ......+++++.+..+++.++ +. +.|.+
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L-~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy--~eI~v 89 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYL-NENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GY--DEIAV 89 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHH-HHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CC--CeEEE
Confidence 4589999999999999999888888 88899999999999998762 233456788999999999854 33 78999
Q ss_pred EEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchh------h----------hhhh---hcc-------------
Q 022700 143 YGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVK------M----------TLWF---DIY------------- 190 (293)
Q Consensus 143 ~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~------~----------~~~~---~~~------------- 190 (293)
+|.||||.+++.+|..+| +++++.+|+............ . .... ..+
T Consensus 90 ~GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~ 168 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKK 168 (243)
T ss_pred EeecchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHH
Confidence 999999999999999999 899999887544211100000 0 0000 001
Q ss_pred ---cChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhc-CCcceEEecCCCCCCCCCch--HHHHHHHHHHH
Q 022700 191 ---KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSK-EKYDPLWVKGGGHCNLETYP--EYIKHLRKFIN 258 (293)
Q Consensus 191 ---~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~ 258 (293)
.....+..|..|++++.|.+|++++.+.+..+++... ...++.+++++||....+.+ .+.+.+..||+
T Consensus 169 ~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 169 LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 1134567789999999999999999999999999875 45689999999999855443 58889999986
No 33
>PLN02578 hydrolase
Probab=99.92 E-value=6e-23 Score=174.88 Aligned_cols=199 Identities=20% Similarity=0.237 Sum_probs=139.3
Q ss_pred ccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHH
Q 022700 50 TKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCL 129 (293)
Q Consensus 50 ~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l 129 (293)
+.+|..+++... +++++||++||++++...|...+..+ . .+|.|+++|+||+|.|+...... ..++..+.+..+
T Consensus 72 ~~~~~~i~Y~~~---g~g~~vvliHG~~~~~~~w~~~~~~l-~-~~~~v~~~D~~G~G~S~~~~~~~-~~~~~a~~l~~~ 145 (354)
T PLN02578 72 TWRGHKIHYVVQ---GEGLPIVLIHGFGASAFHWRYNIPEL-A-KKYKVYALDLLGFGWSDKALIEY-DAMVWRDQVADF 145 (354)
T ss_pred EECCEEEEEEEc---CCCCeEEEECCCCCCHHHHHHHHHHH-h-cCCEEEEECCCCCCCCCCccccc-CHHHHHHHHHHH
Confidence 335666665432 35678999999999999998888877 3 35999999999999998654332 333333333333
Q ss_pred HHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh-----------------hh--ccch--------
Q 022700 130 KREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI-----------------RV--LYPV-------- 181 (293)
Q Consensus 130 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~-----------------~~--~~~~-------- 181 (293)
.+.... ++++++|||+||.+++.+|.++| ++++++++++..... .. ..+.
T Consensus 146 i~~~~~--~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (354)
T PLN02578 146 VKEVVK--EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVV 223 (354)
T ss_pred HHHhcc--CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHH
Confidence 334433 78999999999999999999999 599999987531100 00 0000
Q ss_pred -------------h--------------hhhhhh---------------------------cccChhhhhcCCCcEEEEe
Q 022700 182 -------------K--------------MTLWFD---------------------------IYKNIDKIRHVNCPVLVIH 207 (293)
Q Consensus 182 -------------~--------------~~~~~~---------------------------~~~~~~~l~~i~~P~l~i~ 207 (293)
. ..+..+ .+...+.+.++++|+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~ 303 (354)
T PLN02578 224 LGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLW 303 (354)
T ss_pred HHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEE
Confidence 0 000000 0111234567899999999
Q ss_pred cCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHH
Q 022700 208 GTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 208 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~ 258 (293)
|++|.+++.+.++.+.+.+++. +++.+ ++||..+.+.+ ++.+.|.+|++
T Consensus 304 G~~D~~v~~~~~~~l~~~~p~a-~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 304 GDLDPWVGPAKAEKIKAFYPDT-TLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred eCCCCCCCHHHHHHHHHhCCCC-EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999998888765 77777 58999987777 68899999985
No 34
>PLN02511 hydrolase
Probab=99.91 E-value=6.5e-23 Score=176.07 Aligned_cols=219 Identities=18% Similarity=0.228 Sum_probs=152.0
Q ss_pred CCceeEEEEccCCCEEEEEEEe-----CCCCceEEEEEcCCCCChhh-HH-HHHHHHHhhcCeeEEEEccccccCCCCCC
Q 022700 41 KNMDCHLLETKNGNKIVATFWR-----HPFARFTLLYSHGNAADLGQ-ML-ELFIELRAHLRVNIMSYDYSGYGASTGKP 113 (293)
Q Consensus 41 ~~~~~~~~~~~~g~~l~~~~~~-----~~~~~~~vv~~hG~~~~~~~-~~-~~~~~~~~~~g~~v~~~d~~g~G~s~~~~ 113 (293)
..++...+.+.||..+...+.. .+..+|+||++||++++... |. ..+..+ .+.||+|+++|+||||.|....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~-~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRA-RSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHH-HHCCCEEEEEecCCCCCCCCCC
Confidence 4556678889999888865543 12457899999999776533 43 344445 6789999999999999987432
Q ss_pred C---CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC---ccEEEEecchhhhh------hh----
Q 022700 114 S---EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK---LRGVVLHSAILSGI------RV---- 177 (293)
Q Consensus 114 ~---~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~i~~~p~~~~~------~~---- 177 (293)
. .....+|+.++++++..++. ..+++++||||||.+++.++.++++ +.+++++++..+.. ..
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~--~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~ 225 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYP--SANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNN 225 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCC--CCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHH
Confidence 2 12456899999999988764 3689999999999999999999883 77877766533210 00
Q ss_pred ---------c---cchhhhh---------------------hhh-------cc----------cChhhhhcCCCcEEEEe
Q 022700 178 ---------L---YPVKMTL---------------------WFD-------IY----------KNIDKIRHVNCPVLVIH 207 (293)
Q Consensus 178 ---------~---~~~~~~~---------------------~~~-------~~----------~~~~~l~~i~~P~l~i~ 207 (293)
+ ....... +.+ .+ +....+.++++|+|+|+
T Consensus 226 ~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~ 305 (388)
T PLN02511 226 VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQ 305 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEE
Confidence 0 0000000 000 01 11345678899999999
Q ss_pred cCCCCccChhhH-HHHHHHhcCCcceEEecCCCCCCCCCchH-------HHHHHHHHHHHhhhc
Q 022700 208 GTNDDIVDLSHG-KRLWELSKEKYDPLWVKGGGHCNLETYPE-------YIKHLRKFINAMEKL 263 (293)
Q Consensus 208 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-------~~~~i~~fl~~~~~~ 263 (293)
|++|++++.+.. ....+..++ .++++++++||..+.+.++ +.+.+.+||+.....
T Consensus 306 g~dDpi~p~~~~~~~~~~~~p~-~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 306 AANDPIAPARGIPREDIKANPN-CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred cCCCCcCCcccCcHhHHhcCCC-EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 999999987754 334444444 4888899999998766553 368899999987654
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=1.7e-22 Score=174.17 Aligned_cols=204 Identities=18% Similarity=0.168 Sum_probs=140.7
Q ss_pred EEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhh----hHHHHHHHHH
Q 022700 55 KIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYY----DIEAVYNCLK 130 (293)
Q Consensus 55 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~----d~~~~i~~l~ 130 (293)
.+....+.+++.+|+|||+||++++...|...+..+ .+ +|.|+++|+||+|.|+.........+ .+.+.+..++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L-~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDAL-AS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHH-Hh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 666666665667899999999999888888888777 33 59999999999999975332211112 2223333344
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhh------------h---------c----------
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIR------------V---------L---------- 178 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~------------~---------~---------- 178 (293)
+..++ ++++++||||||.+++.++.++| +++++|+++|...... . .
T Consensus 171 ~~l~~--~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 248 (402)
T PLN02894 171 KAKNL--SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKI 248 (402)
T ss_pred HHcCC--CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHH
Confidence 45554 78999999999999999999999 5999999986421000 0 0
Q ss_pred ----cc----hhhhh---------------------hhh--------------------------cccChhhhhcCCCcE
Q 022700 179 ----YP----VKMTL---------------------WFD--------------------------IYKNIDKIRHVNCPV 203 (293)
Q Consensus 179 ----~~----~~~~~---------------------~~~--------------------------~~~~~~~l~~i~~P~ 203 (293)
.+ ....+ +.+ ..+....+.++++|+
T Consensus 249 ~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 249 IRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 00 00000 000 000112356789999
Q ss_pred EEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHhhhc
Q 022700 204 LVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAMEKL 263 (293)
Q Consensus 204 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~~~ 263 (293)
++++|++|.+.+ .....+.+......++++++++||..+.+.+ ++.+.|.+|++.....
T Consensus 329 liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 329 TFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999999998754 5556666666544689999999999877766 5999999999987764
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.91 E-value=1.5e-22 Score=170.57 Aligned_cols=210 Identities=19% Similarity=0.235 Sum_probs=143.7
Q ss_pred EEccCCCEEEEEEEeCCCCceEEEEEcCCCCChh-hH-------------------------HHHHHHHHhhcCeeEEEE
Q 022700 48 LETKNGNKIVATFWRHPFARFTLLYSHGNAADLG-QM-------------------------LELFIELRAHLRVNIMSY 101 (293)
Q Consensus 48 ~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~-~~-------------------------~~~~~~~~~~~g~~v~~~ 101 (293)
+.+.||..|.++.|.+++++.+|+++||++++.. .+ ..++..+ .+.||.|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l-~~~G~~V~~~ 80 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENF-NKNGYSVYGL 80 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHH-HHCCCcEEEe
Confidence 4567899999999988778899999999998875 21 2344555 8899999999
Q ss_pred ccccccCCCCCCCCC---chh----hhHHHHHHHHHHHh-----------------cCC-CccEEEEEeccChHHHHHHH
Q 022700 102 DYSGYGASTGKPSEF---NTY----YDIEAVYNCLKREY-----------------NVK-QEELILYGQSVGSGPTLHLA 156 (293)
Q Consensus 102 d~~g~G~s~~~~~~~---~~~----~d~~~~i~~l~~~~-----------------~~~-~~~i~l~G~S~Gg~~a~~~a 156 (293)
|+||||.|.+..... ..+ +|+...++.+.+.. ... ..+++++||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999999988542211 222 45555555544310 011 35899999999999999988
Q ss_pred HhcC---------CccEEEEecchhhhhh---------------------hccchh---h-------hhhhh-----c--
Q 022700 157 SRLQ---------KLRGVVLHSAILSGIR---------------------VLYPVK---M-------TLWFD-----I-- 189 (293)
Q Consensus 157 ~~~p---------~v~~~i~~~p~~~~~~---------------------~~~~~~---~-------~~~~~-----~-- 189 (293)
...+ .++++|+++|.+.... ...+.. . ....+ .
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~ 240 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFR 240 (332)
T ss_pred HHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccc
Confidence 7542 4889998887642100 000000 0 00000 0
Q ss_pred -------------ccC----hhhhhcC--CCcEEEEecCCCCccChhhHHHHHHHhcC-CcceEEecCCCCCCCCCc--h
Q 022700 190 -------------YKN----IDKIRHV--NCPVLVIHGTNDDIVDLSHGKRLWELSKE-KYDPLWVKGGGHCNLETY--P 247 (293)
Q Consensus 190 -------------~~~----~~~l~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~--~ 247 (293)
+.. ...+..+ ++|+|+++|++|.+++++.++.+++.+.. ..++.++++++|..+.+. +
T Consensus 241 ~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~ 320 (332)
T TIGR01607 241 YDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNE 320 (332)
T ss_pred cCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHH
Confidence 000 1123444 68999999999999999999999887753 457889999999987664 3
Q ss_pred HHHHHHHHHHH
Q 022700 248 EYIKHLRKFIN 258 (293)
Q Consensus 248 ~~~~~i~~fl~ 258 (293)
++.+.+.+||+
T Consensus 321 ~v~~~i~~wL~ 331 (332)
T TIGR01607 321 EVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHhh
Confidence 68899999985
No 37
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.91 E-value=6.8e-23 Score=185.47 Aligned_cols=223 Identities=17% Similarity=0.150 Sum_probs=169.3
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCCCC-----ceEEEEEcCCCCChhh--HHHHHHHHHhhcCeeEEEEccccccCCCC
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHPFA-----RFTLLYSHGNAADLGQ--MLELFIELRAHLRVNIMSYDYSGYGASTG 111 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~-----~~~vv~~hG~~~~~~~--~~~~~~~~~~~~g~~v~~~d~~g~G~s~~ 111 (293)
.-...|.+.+...||.+++++++.|++. .|+||++||++..... +...+..+ ...||+|+.+|+||.+....
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~-~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVL-ASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHH-hcCCeEEEEeCCCCCCccHH
Confidence 4567788999999999999999988653 3899999998754433 34444555 88999999999998644221
Q ss_pred -------CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhh
Q 022700 112 -------KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMT 184 (293)
Q Consensus 112 -------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~ 184 (293)
........+|+.+.++++.+...+|+++++++|+|+||++++.++.+.+.+++.+...+..+.+.........
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~ 519 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEG 519 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchh
Confidence 1122346689999999887777788889999999999999999999999988888888765543332221111
Q ss_pred ----------------hhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCC
Q 022700 185 ----------------LWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLET 245 (293)
Q Consensus 185 ----------------~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~ 245 (293)
.......+...+.++++|+|+|||++|..|+.+++.++++.++. .++++++|+.+|.+...
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~ 599 (620)
T COG1506 520 LRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP 599 (620)
T ss_pred hcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc
Confidence 11223445667788999999999999999999999999998854 46888999999998552
Q ss_pred c--hHHHHHHHHHHHHhhh
Q 022700 246 Y--PEYIKHLRKFINAMEK 262 (293)
Q Consensus 246 ~--~~~~~~i~~fl~~~~~ 262 (293)
. ....+.+.+|+++..+
T Consensus 600 ~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 600 ENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhHHHHHHHHHHHHHHHhc
Confidence 2 2477888888887654
No 38
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.91 E-value=8.4e-23 Score=152.02 Aligned_cols=145 Identities=28% Similarity=0.445 Sum_probs=121.7
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 69 TLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 69 ~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
+||++||++++...|..+...+ .+.||.|+.+|+|++|.+. ...++.++++++..... +.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l-~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEAL-AEQGYAVVAFDYPGHGDSD-------GADAVERVLADIRAGYP-DPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHH-HHTTEEEEEESCTTSTTSH-------HSHHHHHHHHHHHHHHC-TCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHH-HHCCCEEEEEecCCCCccc-------hhHHHHHHHHHHHhhcC-CCCcEEEEEEccC
Confidence 5899999999998888888888 6679999999999998773 23466777777654433 6689999999999
Q ss_pred hHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC
Q 022700 149 SGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 149 g~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
|.+++.++.+.++++++|+++|+. ..+.+...+.|+++++|++|..++.+..+.+++.++.
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~-------------------~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~ 132 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYP-------------------DSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPG 132 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESS-------------------GCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCS
T ss_pred cHHHHHHhhhccceeEEEEecCcc-------------------chhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCC
Confidence 999999999988999999999831 1455667788999999999999999999999999997
Q ss_pred CcceEEecCCCCC
Q 022700 229 KYDPLWVKGGGHC 241 (293)
Q Consensus 229 ~~~~~~~~~~~H~ 241 (293)
..+++.+++++|+
T Consensus 133 ~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 133 PKELYIIPGAGHF 145 (145)
T ss_dssp SEEEEEETTS-TT
T ss_pred CcEEEEeCCCcCc
Confidence 7799999999995
No 39
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.91 E-value=1.2e-22 Score=164.45 Aligned_cols=179 Identities=16% Similarity=0.157 Sum_probs=127.2
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
+|+|||+||++++...|..++..+ . +|.|+++|+||+|.|..... ..+++..+.+..+.++.++ ++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~--~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~--~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P--DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNI--LPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C--CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCC--CCeEEEEEC
Confidence 578999999999999999888866 3 69999999999999974332 2455555666666666655 899999999
Q ss_pred cChHHHHHHHHhcC-C-ccEEEEecchhhhhhh----------------ccc-----hhh-----------------hhh
Q 022700 147 VGSGPTLHLASRLQ-K-LRGVVLHSAILSGIRV----------------LYP-----VKM-----------------TLW 186 (293)
Q Consensus 147 ~Gg~~a~~~a~~~p-~-v~~~i~~~p~~~~~~~----------------~~~-----~~~-----------------~~~ 186 (293)
|||.+++.++.++| + +++++++++....... +.. ... .++
T Consensus 75 ~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (242)
T PRK11126 75 LGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHH
Confidence 99999999999985 4 9999998754311000 000 000 000
Q ss_pred hhc--------------------ccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCc
Q 022700 187 FDI--------------------YKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETY 246 (293)
Q Consensus 187 ~~~--------------------~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 246 (293)
... .+..+.+.++++|+++++|++|..+. .+.+.. ..++++++++||..+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 155 AKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHREN 227 (242)
T ss_pred HhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhC
Confidence 000 01123456789999999999998542 222222 358899999999997777
Q ss_pred h-HHHHHHHHHHHH
Q 022700 247 P-EYIKHLRKFINA 259 (293)
Q Consensus 247 ~-~~~~~i~~fl~~ 259 (293)
+ ++.+.|.+|+++
T Consensus 228 p~~~~~~i~~fl~~ 241 (242)
T PRK11126 228 PAAFAASLAQILRL 241 (242)
T ss_pred hHHHHHHHHHHHhh
Confidence 7 588999999975
No 40
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.91 E-value=1e-22 Score=164.35 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=131.3
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
+|+|||+||++++...|..+...+ . .+|+|+++|+||+|.|.... . .++.++++.+.+.. .++++++|||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l-~-~~~~vi~~d~~G~G~s~~~~--~---~~~~~~~~~~~~~~---~~~~~lvG~S 73 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEEL-S-AHFTLHLVDLPGHGRSRGFG--P---LSLADAAEAIAAQA---PDPAIWLGWS 73 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhh-c-cCeEEEEecCCcCccCCCCC--C---cCHHHHHHHHHHhC---CCCeEEEEEc
Confidence 378999999999999998888877 3 36999999999999987432 1 23444455555443 2689999999
Q ss_pred cChHHHHHHHHhcCC-ccEEEEecchhhhh-----h-h------------c----cchhhhh-----------------h
Q 022700 147 VGSGPTLHLASRLQK-LRGVVLHSAILSGI-----R-V------------L----YPVKMTL-----------------W 186 (293)
Q Consensus 147 ~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~-----~-~------------~----~~~~~~~-----------------~ 186 (293)
|||.+++.++.++|+ ++++|++++..... . . . ......+ +
T Consensus 74 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (245)
T TIGR01738 74 LGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARAL 153 (245)
T ss_pred HHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 999999999999995 99999887642110 0 0 0 0000000 0
Q ss_pred hh---------------------cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCC
Q 022700 187 FD---------------------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLET 245 (293)
Q Consensus 187 ~~---------------------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 245 (293)
.. ..+....+.++++|+++++|++|.+++.+..+.+.+.+++. ++.+++++||..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHS-ELYIFAKAAHAPFLS 232 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCC-eEEEeCCCCCCcccc
Confidence 00 00112345788999999999999999999988888888764 889999999998766
Q ss_pred ch-HHHHHHHHHH
Q 022700 246 YP-EYIKHLRKFI 257 (293)
Q Consensus 246 ~~-~~~~~i~~fl 257 (293)
.+ ++.+.|.+|+
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 66 6888898885
No 41
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=2.5e-22 Score=164.84 Aligned_cols=202 Identities=13% Similarity=0.151 Sum_probs=138.2
Q ss_pred CCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHH
Q 022700 52 NGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKR 131 (293)
Q Consensus 52 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~ 131 (293)
+|.++. +..+.+.+|+|||+||++.+...|..+...| .+.||.|+++|+||||.|...+.....+++..+.+..+.+
T Consensus 5 ~~~~~~--~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L-~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 5 NGEEVT--DMKPNRQPPHFVLIHGISGGSWCWYKIRCLM-ENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccc--cccccCCCCeEEEECCCCCCcCcHHHHHHHH-HhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 455554 4445567899999999999998998887777 6789999999999999876443333344444444443434
Q ss_pred HhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh-----hhh---hccc----------------------
Q 022700 132 EYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS-----GIR---VLYP---------------------- 180 (293)
Q Consensus 132 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~-----~~~---~~~~---------------------- 180 (293)
... ..++++|+||||||.+++.++..+| +++++|++++... ... ...+
T Consensus 82 ~l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
T PLN02211 82 SLP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPT 160 (273)
T ss_pred hcC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCc
Confidence 442 1278999999999999999999888 5999999976421 000 0000
Q ss_pred ---hh----hhhhhh--------------------cccC---hhhhhcC-CCcEEEEecCCCCccChhhHHHHHHHhcCC
Q 022700 181 ---VK----MTLWFD--------------------IYKN---IDKIRHV-NCPVLVIHGTNDDIVDLSHGKRLWELSKEK 229 (293)
Q Consensus 181 ---~~----~~~~~~--------------------~~~~---~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 229 (293)
.. ..++.. .+.. ......+ ++|+++|.|++|..+|++..+.+.+.+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~ 240 (273)
T PLN02211 161 SAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS 240 (273)
T ss_pred eeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc
Confidence 00 000000 0000 0011234 689999999999999999999999988765
Q ss_pred cceEEecCCCCCCCCCch-HHHHHHHHHHHH
Q 022700 230 YDPLWVKGGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 230 ~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
+++.++ +||..+.+.+ ++.+.|.++...
T Consensus 241 -~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 241 -QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred -EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 777886 7999877776 577777776544
No 42
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.90 E-value=3.2e-22 Score=170.19 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=146.6
Q ss_pred ccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC---CchhhhHHHHH
Q 022700 50 TKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE---FNTYYDIEAVY 126 (293)
Q Consensus 50 ~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~---~~~~~d~~~~i 126 (293)
..+|.++++...+ ++.+++|||+||++++...|..++..+ .+ +|.|+++|+||||.|+..... ....+++.+.+
T Consensus 111 ~~~~~~~~y~~~G-~~~~~~ivllHG~~~~~~~w~~~~~~L-~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 111 SSDLFRWFCVESG-SNNNPPVLLIHGFPSQAYSYRKVLPVL-SK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred cCCceEEEEEecC-CCCCCeEEEECCCCCCHHHHHHHHHHH-hc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 4566677655443 235689999999999999999888877 43 799999999999999854332 24566777777
Q ss_pred HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh--------hhc---------c--chh----
Q 022700 127 NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI--------RVL---------Y--PVK---- 182 (293)
Q Consensus 127 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~--------~~~---------~--~~~---- 182 (293)
..+.+++++ ++++|+|||+||.+++.++..+| +++++|+++|..... ... . +..
T Consensus 188 ~~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~ 265 (383)
T PLN03084 188 ESLIDELKS--DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDK 265 (383)
T ss_pred HHHHHHhCC--CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhh
Confidence 777777766 78999999999999999999999 599999999753210 000 0 000
Q ss_pred --------------hhhhhhc--------------ccC--------hhhh------hcCCCcEEEEecCCCCccChhhHH
Q 022700 183 --------------MTLWFDI--------------YKN--------IDKI------RHVNCPVLVIHGTNDDIVDLSHGK 220 (293)
Q Consensus 183 --------------~~~~~~~--------------~~~--------~~~l------~~i~~P~l~i~g~~D~~~~~~~~~ 220 (293)
...+... +.. ...+ ..+++|+++++|+.|.+++.+..+
T Consensus 266 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~ 345 (383)
T PLN03084 266 ALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVE 345 (383)
T ss_pred hhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHH
Confidence 0000000 000 0001 246899999999999999998888
Q ss_pred HHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHH
Q 022700 221 RLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~ 258 (293)
.+.+.. ..++.+++++||..+++.+ ++.+.|.+||.
T Consensus 346 ~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 346 DFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 887764 3488899999999988877 58899999985
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.90 E-value=1.7e-22 Score=163.39 Aligned_cols=185 Identities=19% Similarity=0.263 Sum_probs=131.3
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhHHHH-HHHHHHHhcCCCccEEEEE
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDIEAV-YNCLKREYNVKQEELILYG 144 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~~~~-i~~l~~~~~~~~~~i~l~G 144 (293)
+|+||++||++++...|..+...+ . .||.|+++|+||+|.|..... ....++++... +..+.+..+. ++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L-~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELL-G-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI--EPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHh-c-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC--CeEEEEE
Confidence 478999999999999999988888 4 789999999999999975332 22344454444 6666666644 7899999
Q ss_pred eccChHHHHHHHHhcCC-ccEEEEecchhhhhhhc--------------------cchhhhhhh----------------
Q 022700 145 QSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVL--------------------YPVKMTLWF---------------- 187 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~--------------------~~~~~~~~~---------------- 187 (293)
||+||.+++.++.++|+ +++++++++........ .......+.
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHh
Confidence 99999999999999995 89999988643211000 000000000
Q ss_pred ----h---------------------cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCC
Q 022700 188 ----D---------------------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCN 242 (293)
Q Consensus 188 ----~---------------------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 242 (293)
. .......+.++++|+++++|++|..++ +..+.+.+..++ .+++.++++||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~ 234 (251)
T TIGR03695 157 QALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNI 234 (251)
T ss_pred HHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCc
Confidence 0 001122356789999999999998763 445556555554 4888999999998
Q ss_pred CCCch-HHHHHHHHHH
Q 022700 243 LETYP-EYIKHLRKFI 257 (293)
Q Consensus 243 ~~~~~-~~~~~i~~fl 257 (293)
+.+.+ ++.+.|.+||
T Consensus 235 ~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 235 HLENPEAFAKILLAFL 250 (251)
T ss_pred CccChHHHHHHHHHHh
Confidence 77666 5888898887
No 44
>PRK07581 hypothetical protein; Validated
Probab=99.90 E-value=1.4e-22 Score=171.98 Aligned_cols=207 Identities=14% Similarity=0.119 Sum_probs=141.3
Q ss_pred CCCEEEEEEEeCC--CCceEEEEEcCCCCChhhHHHHH---HHHHhhcCeeEEEEccccccCCCCCCCC--Cc-------
Q 022700 52 NGNKIVATFWRHP--FARFTLLYSHGNAADLGQMLELF---IELRAHLRVNIMSYDYSGYGASTGKPSE--FN------- 117 (293)
Q Consensus 52 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~---~~~~~~~g~~v~~~d~~g~G~s~~~~~~--~~------- 117 (293)
+|.++++..++.. +..|+||+.||++++...|...+ ..+ ...+|.|+++|+||||.|...... ..
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRAL-DPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCcc-CcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 5667776666542 34567777888776665554333 234 456899999999999999744321 11
Q ss_pred --hhhhHHHHHHHHHHHhcCCCcc-EEEEEeccChHHHHHHHHhcC-CccEEEEecchhhh--------------h----
Q 022700 118 --TYYDIEAVYNCLKREYNVKQEE-LILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG--------------I---- 175 (293)
Q Consensus 118 --~~~d~~~~i~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~--------------~---- 175 (293)
..+|+......+.+++++ ++ ++|+||||||.+|+.+|.++| +|+++|++++.... +
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 124455444557777877 78 579999999999999999999 59999998542210 0
Q ss_pred -------------------hhcc-----ch--h------------hh----hhhhc------------------------
Q 022700 176 -------------------RVLY-----PV--K------------MT----LWFDI------------------------ 189 (293)
Q Consensus 176 -------------------~~~~-----~~--~------------~~----~~~~~------------------------ 189 (293)
.... +. . .. .+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 0000 00 0 00 00000
Q ss_pred ----ccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecC-CCCCCCCC-chHHHHHHHHHHHHhhh
Q 022700 190 ----YKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKG-GGHCNLET-YPEYIKHLRKFINAMEK 262 (293)
Q Consensus 190 ----~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~-~~~~~~~i~~fl~~~~~ 262 (293)
.+....+.++++|+|+|+|++|..++++.++.+.+.+++. +++++++ +||..+.+ .+++...|.+||+++..
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a-~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNA-ELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC-eEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 0112346678999999999999999999999888888775 8889998 89987554 45799999999998753
No 45
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.90 E-value=6.9e-22 Score=165.30 Aligned_cols=209 Identities=20% Similarity=0.279 Sum_probs=144.6
Q ss_pred eeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhH
Q 022700 44 DCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDI 122 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~ 122 (293)
...++...||.++++....++ ++++|||+||+.++...+ .....+ ...+|.|+++|+||||.|..... .....+++
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~-~~~~lvllHG~~~~~~~~-~~~~~~-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 81 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP-DGKPVVFLHGGPGSGTDP-GCRRFF-DPETYRIVLFDQRGCGKSTPHACLEENTTWDL 81 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC-CCCEEEEECCCCCCCCCH-HHHhcc-CccCCEEEEECCCCCCCCCCCCCcccCCHHHH
Confidence 345677778888887665432 356799999987765432 232333 45689999999999999985432 22345677
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhh-----------hhhcc---------c-
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG-----------IRVLY---------P- 180 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~-----------~~~~~---------~- 180 (293)
.+.+..+.+++++ ++++++||||||.+++.++.++| +++++|+++++... ..... .
T Consensus 82 ~~dl~~l~~~l~~--~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 82 VADIEKLREKLGI--KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 7778888888766 78999999999999999999999 58999998753210 00000 0
Q ss_pred -hhhh----------------------------hhhh------------------------c-----------cc----C
Q 022700 181 -VKMT----------------------------LWFD------------------------I-----------YK----N 192 (293)
Q Consensus 181 -~~~~----------------------------~~~~------------------------~-----------~~----~ 192 (293)
.... .|.. . .. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 0000 0000 0 00 0
Q ss_pred hhhhhcC-CCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 193 IDKIRHV-NCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 193 ~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
...+.++ ++|+|+++|++|.++|.+.++.+.+.+++. ++++++++||... .++..+.|.+|+...
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~gH~~~--~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEA-ELKVTNNAGHSAF--DPNNLAALVHALETY 305 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCC-EEEEECCCCCCCC--ChHHHHHHHHHHHHh
Confidence 1223455 589999999999999999999999998765 8889999999975 355677777777653
No 46
>PRK10985 putative hydrolase; Provisional
Probab=99.90 E-value=1.2e-21 Score=164.80 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=144.6
Q ss_pred eeEEEEccCCCEEEEEEEeCC---CCceEEEEEcCCCCChhh-H-HHHHHHHHhhcCeeEEEEccccccCCCCCCC---C
Q 022700 44 DCHLLETKNGNKIVATFWRHP---FARFTLLYSHGNAADLGQ-M-LELFIELRAHLRVNIMSYDYSGYGASTGKPS---E 115 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~-~-~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~---~ 115 (293)
+...++..||..+...+...+ ..+|+||++||++++... + ..++..+ .+.||+|+++|+||+|.+..... .
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l-~~~G~~v~~~d~rG~g~~~~~~~~~~~ 110 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAA-QKRGWLGVVMHFRGCSGEPNRLHRIYH 110 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHH-HHCCCEEEEEeCCCCCCCccCCcceEC
Confidence 344577888887765554322 357899999999876433 3 3455555 78999999999999997753221 1
Q ss_pred CchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-C--ccEEEEecchhhhhhh-----------ccc-
Q 022700 116 FNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-K--LRGVVLHSAILSGIRV-----------LYP- 180 (293)
Q Consensus 116 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~~i~~~p~~~~~~~-----------~~~- 180 (293)
....+|+..+++++.++++. .+++++||||||.+++.+++.++ + +.+++++++..+.... +..
T Consensus 111 ~~~~~D~~~~i~~l~~~~~~--~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~ 188 (324)
T PRK10985 111 SGETEDARFFLRWLQREFGH--VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRY 188 (324)
T ss_pred CCchHHHHHHHHHHHHhCCC--CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHH
Confidence 23468899999999887754 78999999999998888887764 3 7888888775331100 000
Q ss_pred ----h-----------------hhhhh-----h---------------------hcccChhhhhcCCCcEEEEecCCCCc
Q 022700 181 ----V-----------------KMTLW-----F---------------------DIYKNIDKIRHVNCPVLVIHGTNDDI 213 (293)
Q Consensus 181 ----~-----------------~~~~~-----~---------------------~~~~~~~~l~~i~~P~l~i~g~~D~~ 213 (293)
. ..... . ...+....++++++|+++|+|++|.+
T Consensus 189 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~ 268 (324)
T PRK10985 189 LLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPF 268 (324)
T ss_pred HHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCC
Confidence 0 00000 0 00112345678899999999999999
Q ss_pred cChhhHHHHHHHhcCCcceEEecCCCCCCCCCc----hH--HHHHHHHHHHHhh
Q 022700 214 VDLSHGKRLWELSKEKYDPLWVKGGGHCNLETY----PE--YIKHLRKFINAME 261 (293)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----~~--~~~~i~~fl~~~~ 261 (293)
++.+....+.+..+ ..++.+++++||..+.+. +. .-+.+.+|+....
T Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 269 MTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred CChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 99887776654444 347788899999975442 22 3466788887554
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.89 E-value=4.3e-22 Score=171.20 Aligned_cols=198 Identities=22% Similarity=0.283 Sum_probs=139.7
Q ss_pred CCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHH
Q 022700 52 NGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKR 131 (293)
Q Consensus 52 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~ 131 (293)
++..+.++... .+++++|||+||++++...|......+ .+ +|+|+++|+||||.|..... ....+++.+.+..+.+
T Consensus 117 ~~~~i~~~~~g-~~~~~~vl~~HG~~~~~~~~~~~~~~l-~~-~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 117 GGRTVRYLRLG-EGDGTPVVLIHGFGGDLNNWLFNHAAL-AA-GRPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLD 192 (371)
T ss_pred cCcEEEEeccc-CCCCCeEEEECCCCCccchHHHHHHHH-hc-CCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 34555543332 245689999999999999999888877 33 49999999999999964332 3445666666666767
Q ss_pred HhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh-------c---------cc-----------hhh
Q 022700 132 EYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV-------L---------YP-----------VKM 183 (293)
Q Consensus 132 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~-------~---------~~-----------~~~ 183 (293)
..+. .+++++|||+||.+++.+|..+| ++.++++++|....... . .+ ...
T Consensus 193 ~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (371)
T PRK14875 193 ALGI--ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTR 270 (371)
T ss_pred hcCC--ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCH
Confidence 7654 78999999999999999999988 69999999874211000 0 00 000
Q ss_pred hh----hh----------------h-------cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEec
Q 022700 184 TL----WF----------------D-------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVK 236 (293)
Q Consensus 184 ~~----~~----------------~-------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
.+ +. . .++....+.++++|+++++|++|.+++.+.++.+ ....++.+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~~~ 346 (371)
T PRK14875 271 QMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHVLP 346 (371)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEEeC
Confidence 00 00 0 0111234567899999999999999998776543 3445888999
Q ss_pred CCCCCCCCCch-HHHHHHHHHHHH
Q 022700 237 GGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 237 ~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
++||..+.+.+ ++.+.|.+||++
T Consensus 347 ~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 347 GAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999877666 578888899864
No 48
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.89 E-value=1.3e-22 Score=161.65 Aligned_cols=174 Identities=23% Similarity=0.306 Sum_probs=130.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 70 LLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 70 vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
|||+||++++...|..++..+ . .||.|+++|+||+|.|..... .....++..+.+..+.++.+. ++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l-~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEAL-A-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI--KKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHH-H-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT--SSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHH-h-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc--ccccccccccc
Confidence 799999999999999988887 4 699999999999999986443 223445555666666677755 79999999999
Q ss_pred hHHHHHHHHhcC-CccEEEEecchhhhhhhc---------cc-----------hhhhhh--------------------h
Q 022700 149 SGPTLHLASRLQ-KLRGVVLHSAILSGIRVL---------YP-----------VKMTLW--------------------F 187 (293)
Q Consensus 149 g~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~---------~~-----------~~~~~~--------------------~ 187 (293)
|.+++.++..+| +++++|+++|........ .. .....+ .
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALA 156 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 999999999998 599999999876421100 00 000000 0
Q ss_pred -------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchH
Q 022700 188 -------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPE 248 (293)
Q Consensus 188 -------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 248 (293)
...+....+..+++|+++++|++|.+++.+..+.+.+.+++. ++++++++||..+.+.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 157 EYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNA-ELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp HHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTE-EEEEETTSSSTHHHHSHH
T ss_pred cccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCC-EEEEECCCCCccHHHCHH
Confidence 001112456788999999999999999988888888888764 899999999998666553
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.89 E-value=1.8e-21 Score=159.88 Aligned_cols=208 Identities=15% Similarity=0.197 Sum_probs=138.5
Q ss_pred EEEEccCCCEEEEEEEeCCC-CceEEEEEcCCCC----ChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchh
Q 022700 46 HLLETKNGNKIVATFWRHPF-ARFTLLYSHGNAA----DLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTY 119 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~----~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~ 119 (293)
+.+.. +|..+.+++..|.+ .++.||++||+.. +...+..+...+ .+.||.|+++|+||||.|.+... .....
T Consensus 5 ~~~~~-~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l-~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~ 82 (274)
T TIGR03100 5 LTFSC-EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRL-AEAGFPVLRFDYRGMGDSEGENLGFEGID 82 (274)
T ss_pred EEEEc-CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHH-HHCCCEEEEeCCCCCCCCCCCCCCHHHHH
Confidence 44544 46777777776553 4567787887653 223344445555 78899999999999999875432 22345
Q ss_pred hhHHHHHHHHHHHh-cCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccc-----------hhhhhhh
Q 022700 120 YDIEAVYNCLKREY-NVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYP-----------VKMTLWF 187 (293)
Q Consensus 120 ~d~~~~i~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~-----------~~~~~~~ 187 (293)
+|+.++++++++.. +. ++++++||||||.+++.++...++++++|+++|+......... ....+|.
T Consensus 83 ~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWR 160 (274)
T ss_pred HHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHH
Confidence 78888999887764 33 6799999999999999998776689999999987542110000 0001111
Q ss_pred hc--------------------c---c-----------ChhhhhcCCCcEEEEecCCCCccChhhH------HHHHHHhc
Q 022700 188 DI--------------------Y---K-----------NIDKIRHVNCPVLVIHGTNDDIVDLSHG------KRLWELSK 227 (293)
Q Consensus 188 ~~--------------------~---~-----------~~~~l~~i~~P~l~i~g~~D~~~~~~~~------~~~~~~~~ 227 (293)
.. + . ....+..+++|+++++|+.|...+ ... ..+.+.+.
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~ 239 (274)
T TIGR03100 161 KLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALE 239 (274)
T ss_pred HhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhh
Confidence 00 0 0 013445778999999999998753 221 33444443
Q ss_pred -CCcceEEecCCCCCCCCCch--HHHHHHHHHHH
Q 022700 228 -EKYDPLWVKGGGHCNLETYP--EYIKHLRKFIN 258 (293)
Q Consensus 228 -~~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~ 258 (293)
..+++..+++++|+...+.. ++.+.|.+||+
T Consensus 240 ~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 240 DPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 34588889999998744433 58899999995
No 50
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.89 E-value=5.7e-22 Score=168.85 Aligned_cols=204 Identities=17% Similarity=0.199 Sum_probs=142.5
Q ss_pred cCCCEEEEEEEeCC--CCceEEEEEcCCCCChh-----------hHHHHHH---HHHhhcCeeEEEEcccc--ccCCCCC
Q 022700 51 KNGNKIVATFWRHP--FARFTLLYSHGNAADLG-----------QMLELFI---ELRAHLRVNIMSYDYSG--YGASTGK 112 (293)
Q Consensus 51 ~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~-----------~~~~~~~---~~~~~~g~~v~~~d~~g--~G~s~~~ 112 (293)
-+|.++++..+.++ ..+++||++||++++.. .|..++. .+ ...+|.|+++|+|| +|.|...
T Consensus 13 ~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l-~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAI-DTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred cCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCc-CCCceEEEEecCCCCCCCCCCCC
Confidence 35778888777652 34689999999998763 2444431 33 46789999999999 5555321
Q ss_pred ---CC--------CCchhhhHHHHHHHHHHHhcCCCcc-EEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh----
Q 022700 113 ---PS--------EFNTYYDIEAVYNCLKREYNVKQEE-LILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI---- 175 (293)
Q Consensus 113 ---~~--------~~~~~~d~~~~i~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~---- 175 (293)
+. .....+++.+.+..+++++++ ++ ++++||||||.+++.++.++| +++++|++++.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCI 169 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHH
Confidence 10 123457777777777888877 67 999999999999999999999 599999998643100
Q ss_pred ------h-hc-----------c----c---h--hh-------------------------------------hhhh----
Q 022700 176 ------R-VL-----------Y----P---V--KM-------------------------------------TLWF---- 187 (293)
Q Consensus 176 ------~-~~-----------~----~---~--~~-------------------------------------~~~~---- 187 (293)
. .. . + . .. ..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 170 AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 0 00 0 0 0 00 0000
Q ss_pred ----h---------------ccc-------ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceE-----Eec
Q 022700 188 ----D---------------IYK-------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPL-----WVK 236 (293)
Q Consensus 188 ----~---------------~~~-------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~ 236 (293)
. .++ ..+.++++++|+|+|+|++|.+++++.++.+.+.+++. ++. +++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~~v~~~~i~~ 328 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAA-GLRVTYVEIES 328 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhc-CCceEEEEeCC
Confidence 0 000 02456678999999999999999999999999999875 443 457
Q ss_pred CCCCCCCCCch-HHHHHHHHHHH
Q 022700 237 GGGHCNLETYP-EYIKHLRKFIN 258 (293)
Q Consensus 237 ~~~H~~~~~~~-~~~~~i~~fl~ 258 (293)
++||..+.+.+ ++.+.|.+||+
T Consensus 329 ~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 329 PYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCCcchhhcCHHHHHHHHHHHhC
Confidence 89999866666 68899999974
No 51
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=7.7e-22 Score=167.50 Aligned_cols=202 Identities=15% Similarity=0.095 Sum_probs=136.5
Q ss_pred CCCEEEEEEEeCCCCceEEEEEcCCCCChh------------hHHHHHH---HHHhhcCeeEEEEccccccCCCCCCCCC
Q 022700 52 NGNKIVATFWRHPFARFTLLYSHGNAADLG------------QMLELFI---ELRAHLRVNIMSYDYSGYGASTGKPSEF 116 (293)
Q Consensus 52 ~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~------------~~~~~~~---~~~~~~g~~v~~~d~~g~G~s~~~~~~~ 116 (293)
+|.++++....+ .++++||+||+.++.. .|..++. .| ...+|.|+++|+||+|.|... .
T Consensus 44 ~~~~l~y~~~G~--~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L-~~~~~~Vi~~Dl~G~g~s~~~---~ 117 (343)
T PRK08775 44 EDLRLRYELIGP--AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRAL-DPARFRLLAFDFIGADGSLDV---P 117 (343)
T ss_pred CCceEEEEEecc--CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCcc-CccccEEEEEeCCCCCCCCCC---C
Confidence 677777665542 2334666666555544 4666664 34 345799999999999987522 2
Q ss_pred chhhhHHHHHHHHHHHhcCCCcc-EEEEEeccChHHHHHHHHhcC-CccEEEEecchhhh------hhh----c---c--
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEE-LILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG------IRV----L---Y-- 179 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~------~~~----~---~-- 179 (293)
...++..+.+..+.+.+++ ++ ++++||||||.+++.+|.++| +++++|++++.... ... . .
T Consensus 118 ~~~~~~a~dl~~ll~~l~l--~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~ 195 (343)
T PRK08775 118 IDTADQADAIALLLDALGI--ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQL 195 (343)
T ss_pred CCHHHHHHHHHHHHHHcCC--CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCC
Confidence 2345556666667777766 55 579999999999999999999 59999999864210 000 0 0
Q ss_pred --------c---------h-h-h---hhhhhc--------------------------c------------c-Chhhhhc
Q 022700 180 --------P---------V-K-M---TLWFDI--------------------------Y------------K-NIDKIRH 198 (293)
Q Consensus 180 --------~---------~-~-~---~~~~~~--------------------------~------------~-~~~~l~~ 198 (293)
. . . . ..+... . + ....+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 275 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEA 275 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhc
Confidence 0 0 0 0 000000 0 0 0012457
Q ss_pred CCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecC-CCCCCCCCch-HHHHHHHHHHHHhh
Q 022700 199 VNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKG-GGHCNLETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 199 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~~~~-~~~~~i~~fl~~~~ 261 (293)
+++|+|+++|++|.+++++..+.+.+.+....+++++++ +||..+.+.+ ++.+.|.+||++..
T Consensus 276 I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 276 IRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred CCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 889999999999999999988899888854458999985 9999876666 58999999998654
No 52
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=2.9e-21 Score=165.79 Aligned_cols=208 Identities=13% Similarity=0.117 Sum_probs=144.4
Q ss_pred CCCEEEEEEEeCC--CCceEEEEEcCCCCChhh-------------HHHHHH---HHHhhcCeeEEEEccccc-cCCCCC
Q 022700 52 NGNKIVATFWRHP--FARFTLLYSHGNAADLGQ-------------MLELFI---ELRAHLRVNIMSYDYSGY-GASTGK 112 (293)
Q Consensus 52 ~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~-------------~~~~~~---~~~~~~g~~v~~~d~~g~-G~s~~~ 112 (293)
+|.+++|..+..+ +.+|+|||+||++++... |..++. .+ ...+|.|+++|++|+ |.|.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l-~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPI-DTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCcc-CccceEEEeccCCCCCCCCCCC
Confidence 4566777666542 247899999999999875 333332 23 356899999999983 444321
Q ss_pred CC-------------CCchhhhHHHHHHHHHHHhcCCCcc-EEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh--
Q 022700 113 PS-------------EFNTYYDIEAVYNCLKREYNVKQEE-LILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI-- 175 (293)
Q Consensus 113 ~~-------------~~~~~~d~~~~i~~l~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~-- 175 (293)
.. ....++++.+.+..+.+++++ ++ ++++||||||.+++.++..+| +++++|++++.....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI--TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC--CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 10 123567777777778888877 67 599999999999999999999 599999998532110
Q ss_pred ---------hhc----------------cc------------------------h------------------hhhh---
Q 022700 176 ---------RVL----------------YP------------------------V------------------KMTL--- 185 (293)
Q Consensus 176 ---------~~~----------------~~------------------------~------------------~~~~--- 185 (293)
... .+ . ...+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 000 00 0 0000
Q ss_pred ----hhhc---------------cc--------ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCC---cceEEe
Q 022700 186 ----WFDI---------------YK--------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEK---YDPLWV 235 (293)
Q Consensus 186 ----~~~~---------------~~--------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (293)
+... ++ ..+.+.+|++|+|+|+|++|.+++++.++.+.+.+++. .+++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i 347 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI 347 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000 00 12445688999999999999999999999999999764 256667
Q ss_pred c-CCCCCCCCCch-HHHHHHHHHHHHhhh
Q 022700 236 K-GGGHCNLETYP-EYIKHLRKFINAMEK 262 (293)
Q Consensus 236 ~-~~~H~~~~~~~-~~~~~i~~fl~~~~~ 262 (293)
+ ++||..+.+.+ ++.+.|.+||++...
T Consensus 348 ~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 348 DSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 4 89999866666 689999999988654
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.87 E-value=5.1e-21 Score=148.11 Aligned_cols=169 Identities=19% Similarity=0.272 Sum_probs=120.3
Q ss_pred eEEEEEcCCCCChhhHHH-HHHHHHhh--cCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 68 FTLLYSHGNAADLGQMLE-LFIELRAH--LRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~-~~~~~~~~--~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
|+||++||++++...|.. .+..++.+ .+|.|+++|+||++ +++.+.+..+.++.+. ++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~--~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGG--DPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCC--CCeEEEE
Confidence 679999999999988874 34444344 37999999999874 3466677777777765 7899999
Q ss_pred eccChHHHHHHHHhcCCccEEEEecchhhhhhhccc---------------hhhhhhhhcc-cChhhhhcCCCcEEEEec
Q 022700 145 QSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYP---------------VKMTLWFDIY-KNIDKIRHVNCPVLVIHG 208 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~---------------~~~~~~~~~~-~~~~~l~~i~~P~l~i~g 208 (293)
|||||.+++.++.++| . .+|+++|..+....... ....+..+.. .....+. ..+|+++++|
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~-~~~~v~iihg 144 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLE-SPDLIWLLQQ 144 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCC-ChhhEEEEEe
Confidence 9999999999999998 3 45778876552111110 0011111110 0111222 5678899999
Q ss_pred CCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHH
Q 022700 209 TNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 209 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 258 (293)
++|.++|++.+.++++.. +..+++|++|.+... +++.+.+.+|+.
T Consensus 145 ~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~-~~~~~~i~~fl~ 189 (190)
T PRK11071 145 TGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGF-ERYFNQIVDFLG 189 (190)
T ss_pred CCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhH-HHhHHHHHHHhc
Confidence 999999999999998853 566889999988332 668888998874
No 54
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.87 E-value=1.4e-20 Score=156.02 Aligned_cols=216 Identities=17% Similarity=0.226 Sum_probs=151.0
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCC--
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKP-- 113 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~-- 113 (293)
....+..+.+.+.+|..|.++++.|. ++.|.||.+||.++....+...+. + ...||.|+.+|.||+|......
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~-a~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-W-AAAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-H-HHTT-EEEEE--TTTSSSS-B-SS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-c-ccCCeEEEEecCCCCCCCCCCccc
Confidence 34566678889999999999999776 346999999999998777665433 4 6789999999999998321000
Q ss_pred ---------------C-CC-----chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchh
Q 022700 114 ---------------S-EF-----NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAIL 172 (293)
Q Consensus 114 ---------------~-~~-----~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~ 172 (293)
. .. ..+.|+..+++++.....+|.++|++.|.|+||.+++.+|+..++|++++...|++
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l 209 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFL 209 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESS
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCc
Confidence 0 00 12367888999999888888899999999999999999999999999999999976
Q ss_pred hhhhhccc---------hhhhhh----------------hhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhc
Q 022700 173 SGIRVLYP---------VKMTLW----------------FDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSK 227 (293)
Q Consensus 173 ~~~~~~~~---------~~~~~~----------------~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 227 (293)
.-...... ....++ ...++.....+.|++|+++..|-.|.+||+...-..++.++
T Consensus 210 ~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 210 CDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp SSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--
T ss_pred cchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC
Confidence 53322111 111111 12345566678899999999999999999999999999999
Q ss_pred CCcceEEecCCCCCCCCCchHH-HHHHHHHHHH
Q 022700 228 EKYDPLWVKGGGHCNLETYPEY-IKHLRKFINA 259 (293)
Q Consensus 228 ~~~~~~~~~~~~H~~~~~~~~~-~~~i~~fl~~ 259 (293)
..+++.++|..+|.. .+++ .+...+||.+
T Consensus 290 ~~K~l~vyp~~~He~---~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 290 GPKELVVYPEYGHEY---GPEFQEDKQLNFLKE 319 (320)
T ss_dssp SSEEEEEETT--SST---THHHHHHHHHHHHHH
T ss_pred CCeeEEeccCcCCCc---hhhHHHHHHHHHHhc
Confidence 888999999999943 3555 7788888875
No 55
>PLN02872 triacylglycerol lipase
Probab=99.86 E-value=1.5e-20 Score=160.35 Aligned_cols=219 Identities=15% Similarity=0.145 Sum_probs=151.0
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCC------CCceEEEEEcCCCCChhhHH-----HHHHHHHhhcCeeEEEEcccccc
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHP------FARFTLLYSHGNAADLGQML-----ELFIELRAHLRVNIMSYDYSGYG 107 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~------~~~~~vv~~hG~~~~~~~~~-----~~~~~~~~~~g~~v~~~d~~g~G 107 (293)
...++|+..+++.||..|....+++. .++|+|+++||++.+...|. ..+...+++.||.|+++|.||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 46899999999999999998887643 23689999999988777663 23343447889999999999987
Q ss_pred CCCCCC----CC-----C---ch-hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC----ccEEEEecc
Q 022700 108 ASTGKP----SE-----F---NT-YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK----LRGVVLHSA 170 (293)
Q Consensus 108 ~s~~~~----~~-----~---~~-~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~i~~~p 170 (293)
.+.+.. .. . .. ..|+.++++++.+.. .++++++||||||.+++.++ ..|+ ++.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 653211 00 0 11 268888898887542 37899999999999998555 4552 777777776
Q ss_pred hhhhhh---------------h---------ccchh-------hh-------------hhh-------------------
Q 022700 171 ILSGIR---------------V---------LYPVK-------MT-------------LWF------------------- 187 (293)
Q Consensus 171 ~~~~~~---------------~---------~~~~~-------~~-------------~~~------------------- 187 (293)
...... . ..+.. .. .+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~p 275 (395)
T PLN02872 196 ISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEP 275 (395)
T ss_pred hhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCC
Confidence 421000 0 00000 00 000
Q ss_pred --------------------hccc---------------ChhhhhcC--CCcEEEEecCCCCccChhhHHHHHHHhcCCc
Q 022700 188 --------------------DIYK---------------NIDKIRHV--NCPVLVIHGTNDDIVDLSHGKRLWELSKEKY 230 (293)
Q Consensus 188 --------------------~~~~---------------~~~~l~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 230 (293)
..|+ +.-.++++ ++|+++++|++|.+++++..+.+.+.++...
T Consensus 276 agtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~ 355 (395)
T PLN02872 276 HPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKP 355 (395)
T ss_pred CcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCcc
Confidence 0011 11234556 5799999999999999999999999998755
Q ss_pred ceEEecCCCCCC---CCCch-HHHHHHHHHHHHhh
Q 022700 231 DPLWVKGGGHCN---LETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 231 ~~~~~~~~~H~~---~~~~~-~~~~~i~~fl~~~~ 261 (293)
++..+++.+|.. ..+.+ ++.+.|.+|+++..
T Consensus 356 ~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 356 ELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred EEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 778899999963 33444 58899999998644
No 56
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.86 E-value=6.2e-20 Score=180.88 Aligned_cols=192 Identities=18% Similarity=0.226 Sum_probs=138.0
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-------CCchhhhHHHHHHHHHHHhcCCCc
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-------EFNTYYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-------~~~~~~d~~~~i~~l~~~~~~~~~ 138 (293)
.+++|||+||++++...|..++..+ . .+|.|+++|+||||.|..... .....+++.+.+..+.++++. +
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L-~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~--~ 1445 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAI-S-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP--G 1445 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHH-h-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC--C
Confidence 4689999999999999999888877 3 358999999999999874321 122345666666666666655 7
Q ss_pred cEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhh----------------hhccc---------hh-hh-------
Q 022700 139 ELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGI----------------RVLYP---------VK-MT------- 184 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~----------------~~~~~---------~~-~~------- 184 (293)
+++++||||||.+++.++.++| +++++|++++..... ..... +. ..
T Consensus 1446 ~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 1525 (1655)
T PLN02980 1446 KVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRN 1525 (1655)
T ss_pred CEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhcc
Confidence 9999999999999999999999 599999987531100 00000 00 00
Q ss_pred ------hhhh---------------------cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCC--------
Q 022700 185 ------LWFD---------------------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEK-------- 229 (293)
Q Consensus 185 ------~~~~---------------------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-------- 229 (293)
.+.. ..+..+.+.++++|+|+|+|++|..++ +.++.+.+.+++.
T Consensus 1526 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~ 1604 (1655)
T PLN02980 1526 HPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKG 1604 (1655)
T ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccccccc
Confidence 0000 000124567889999999999999774 5666777766542
Q ss_pred ---cceEEecCCCCCCCCCch-HHHHHHHHHHHHhhh
Q 022700 230 ---YDPLWVKGGGHCNLETYP-EYIKHLRKFINAMEK 262 (293)
Q Consensus 230 ---~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~~ 262 (293)
.++++++++||..+.+.+ ++.+.|.+||.+...
T Consensus 1605 ~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1605 KEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred ccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 378899999999877777 589999999997553
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.86 E-value=1e-20 Score=150.07 Aligned_cols=175 Identities=19% Similarity=0.263 Sum_probs=127.4
Q ss_pred HHHHhhcCeeEEEEccccccCCC-------CCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 88 IELRAHLRVNIMSYDYSGYGAST-------GKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 88 ~~~~~~~g~~v~~~d~~g~G~s~-------~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..++++.||.|+.+|+||.+... .........+|+.+++++++++..+|+++|+++|+|+||.+++.++.++|
T Consensus 7 ~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~ 86 (213)
T PF00326_consen 7 AQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP 86 (213)
T ss_dssp HHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred HHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccc
Confidence 44558999999999999987432 11222345689999999999998888999999999999999999999888
Q ss_pred C-ccEEEEecchhhhhhhccch---hhhhhh------------hcccChhhhhc--CCCcEEEEecCCCCccChhhHHHH
Q 022700 161 K-LRGVVLHSAILSGIRVLYPV---KMTLWF------------DIYKNIDKIRH--VNCPVLVIHGTNDDIVDLSHGKRL 222 (293)
Q Consensus 161 ~-v~~~i~~~p~~~~~~~~~~~---~~~~~~------------~~~~~~~~l~~--i~~P~l~i~g~~D~~~~~~~~~~~ 222 (293)
+ +++++..+|+.+........ ....+. ....+...+.+ +++|+|++||++|..||++++..+
T Consensus 87 ~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~ 166 (213)
T PF00326_consen 87 DRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRL 166 (213)
T ss_dssp CGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHH
T ss_pred eeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHH
Confidence 5 89999999987754332221 110000 11123344455 789999999999999999999999
Q ss_pred HHHhcC---CcceEEecCCCCCCCCCch--HHHHHHHHHHHHhhh
Q 022700 223 WELSKE---KYDPLWVKGGGHCNLETYP--EYIKHLRKFINAMEK 262 (293)
Q Consensus 223 ~~~~~~---~~~~~~~~~~~H~~~~~~~--~~~~~i~~fl~~~~~ 262 (293)
++.+.. ..+++++|+++|....... ++.+.+.+|+++..+
T Consensus 167 ~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 167 YNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 887743 4688889999996643222 578899999998764
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.85 E-value=5.8e-20 Score=135.41 Aligned_cols=196 Identities=18% Similarity=0.235 Sum_probs=149.6
Q ss_pred ceeEEEEccCCCEEEEEEEeCC-CCceEEEEEcCCC---CCh-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC-C
Q 022700 43 MDCHLLETKNGNKIVATFWRHP-FARFTLLYSHGNA---ADL-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE-F 116 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~---~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~-~ 116 (293)
+.++.++...| .+...+.+++ ...|+.|++|... ++. ......+.+.+.+.||.++.+|+||.|.|.+.... .
T Consensus 4 ~~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~Gi 82 (210)
T COG2945 4 MPTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGI 82 (210)
T ss_pred CCcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCc
Confidence 44566666655 4566666555 5789999999743 332 22233344444899999999999999999987653 4
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhh
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKI 196 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (293)
...+|+.++++|++.+.. +.....+.|+|+|+++++.+|.+.|.....+.+.|.... .....+
T Consensus 83 GE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~----------------~dfs~l 145 (210)
T COG2945 83 GELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINA----------------YDFSFL 145 (210)
T ss_pred chHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCc----------------hhhhhc
Confidence 577999999999998864 223348999999999999999999988888888876651 123445
Q ss_pred hcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHH
Q 022700 197 RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 197 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 258 (293)
....+|.++|+|+.|++++.....++.+- ...+.+.+++++|++......+.+.+.+||.
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 55678999999999999998887777666 3347889999999999888889999999996
No 59
>PRK05855 short chain dehydrogenase; Validated
Probab=99.84 E-value=5.9e-20 Score=167.09 Aligned_cols=209 Identities=18% Similarity=0.188 Sum_probs=138.2
Q ss_pred EEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC-CCchhhhHHHHH
Q 022700 48 LETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS-EFNTYYDIEAVY 126 (293)
Q Consensus 48 ~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~d~~~~i 126 (293)
+...+|..++++.+.+ ..+|+|||+||++++...|..++..+ ..||.|+++|+||||.|..... .....+++.+.+
T Consensus 7 ~~~~~g~~l~~~~~g~-~~~~~ivllHG~~~~~~~w~~~~~~L--~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl 83 (582)
T PRK05855 7 VVSSDGVRLAVYEWGD-PDRPTVVLVHGYPDNHEVWDGVAPLL--ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDF 83 (582)
T ss_pred EEeeCCEEEEEEEcCC-CCCCeEEEEcCCCchHHHHHHHHHHh--hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHH
Confidence 3455788888776653 34789999999999999999888877 4579999999999999975332 233455666666
Q ss_pred HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC---CccEEEEec-chhhhh-----------------hhccchhh--
Q 022700 127 NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ---KLRGVVLHS-AILSGI-----------------RVLYPVKM-- 183 (293)
Q Consensus 127 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~-p~~~~~-----------------~~~~~~~~-- 183 (293)
..+.+..+. ..+++|+||||||.+++.++.... .+..++.++ |..... ........
T Consensus 84 ~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (582)
T PRK05855 84 AAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSW 162 (582)
T ss_pred HHHHHHhCC-CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhH
Confidence 666666553 245999999999999988877632 233333332 211100 00000000
Q ss_pred --------------------hhhhh---c------------------cc-------------ChhhhhcCCCcEEEEecC
Q 022700 184 --------------------TLWFD---I------------------YK-------------NIDKIRHVNCPVLVIHGT 209 (293)
Q Consensus 184 --------------------~~~~~---~------------------~~-------------~~~~l~~i~~P~l~i~g~ 209 (293)
..+.+ . .. ....+..+++|+++++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~ 242 (582)
T PRK05855 163 YIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPT 242 (582)
T ss_pred HHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeC
Confidence 00000 0 00 001123478999999999
Q ss_pred CCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHhhh
Q 022700 210 NDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAMEK 262 (293)
Q Consensus 210 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~~ 262 (293)
+|.+++....+.+.+.+++. .+++++ +||+.+.+.+ ++.+.|.+|+.+...
T Consensus 243 ~D~~v~~~~~~~~~~~~~~~-~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 243 GDPYVRPALYDDLSRWVPRL-WRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred CCcccCHHHhccccccCCcc-eEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 99999999888887776653 555665 6999877666 588999999987553
No 60
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=2.8e-19 Score=143.01 Aligned_cols=175 Identities=18% Similarity=0.124 Sum_probs=122.4
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC---CC-------CCCCch-------hhhHHHHHH
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST---GK-------PSEFNT-------YYDIEAVYN 127 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~---~~-------~~~~~~-------~~d~~~~i~ 127 (293)
..+|+||++||++++...|..+...+ ...++.+..++.+|..... +. ...... .+.+.+.++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l-~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWF-APAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHH-HHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 45789999999999999999988888 4445444455555532211 00 011111 123445566
Q ss_pred HHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEE
Q 022700 128 CLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVI 206 (293)
Q Consensus 128 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i 206 (293)
++.++.+++.++|+++|||+||.+++.++...|+ +.+++.+++..... ........|++++
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------~~~~~~~~pvli~ 154 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------PETAPTATTIHLI 154 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc------------------cccccCCCcEEEE
Confidence 6666777777899999999999999999988886 56677666532210 0112247899999
Q ss_pred ecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCchHHHHHHHHHHHHhh
Q 022700 207 HGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETYPEYIKHLRKFINAME 261 (293)
Q Consensus 207 ~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 261 (293)
||++|.++|.+.++++.+.+.. ..++..+++++|.+. ++..+.+.+||.+..
T Consensus 155 hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~---~~~~~~~~~~l~~~l 209 (232)
T PRK11460 155 HGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID---PRLMQFALDRLRYTV 209 (232)
T ss_pred ecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC---HHHHHHHHHHHHHHc
Confidence 9999999999999999887753 346777899999763 566777778887655
No 61
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.83 E-value=2.1e-19 Score=142.95 Aligned_cols=188 Identities=18% Similarity=0.142 Sum_probs=125.9
Q ss_pred EEEEEeCCC--CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccC-CCCCCCCC-------------chhh
Q 022700 57 VATFWRHPF--ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGA-STGKPSEF-------------NTYY 120 (293)
Q Consensus 57 ~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~-s~~~~~~~-------------~~~~ 120 (293)
.+|...|.+ +.|.||++|++.+-..........+ ++.||.|+++|+-+... ........ ....
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~l-A~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNPNIRDLADRL-AEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHH-HHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHH-HhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 455555554 5899999999888776666777777 78899999999864333 11111100 1225
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCC
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVN 200 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 200 (293)
++.+.+++++++...+.++|.++|+|+||.+++.++...+.+++++...|... .........+++
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~---------------~~~~~~~~~~~~ 145 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSP---------------PPPPLEDAPKIK 145 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSS---------------GGGHHHHGGG--
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCC---------------CCcchhhhcccC
Confidence 56677888887765556899999999999999999998888999999887100 011245567889
Q ss_pred CcEEEEecCCCCccChhhHHHHHHHh---cCCcceEEecCCCCCCCCCc---------hHHHHHHHHHHHHh
Q 022700 201 CPVLVIHGTNDDIVDLSHGKRLWELS---KEKYDPLWVKGGGHCNLETY---------PEYIKHLRKFINAM 260 (293)
Q Consensus 201 ~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~---------~~~~~~i~~fl~~~ 260 (293)
+|+++++|++|+.++.+..+.+.+.+ +...++.+|+|++|.+.... .+.++.+.+||+++
T Consensus 146 ~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 146 APVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999888888877 34568889999999974332 13567788887653
No 62
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=8.3e-19 Score=146.69 Aligned_cols=217 Identities=18% Similarity=0.230 Sum_probs=141.6
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCCC--CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHPF--ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF 116 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~ 116 (293)
....++++.++..+ ..|.+++..|++ +.|+||++.|+.+...++...+...+..+|++++++|+||.|.|...+...
T Consensus 161 ~~~~i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 161 SDYPIEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp SSSEEEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S
T ss_pred CCCCcEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc
Confidence 35678888998876 778887776654 458888888888888888888777668999999999999999986444333
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc-CCccEEEEecchhhhhhh----c--cch-hh-----
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL-QKLRGVVLHSAILSGIRV----L--YPV-KM----- 183 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~v~~~i~~~p~~~~~~~----~--~~~-~~----- 183 (293)
+...-...+++++.+...+|..+|+++|.|+||++|.++|... ++++++|..+|.+..+-. . .|. ..
T Consensus 240 D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~ 319 (411)
T PF06500_consen 240 DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLAS 319 (411)
T ss_dssp -CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHH
Confidence 4445577889999988888888999999999999999999865 589999999986432110 0 000 00
Q ss_pred hh---------h---hhcccCh--hhh--hcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCC-CCCCCCc
Q 022700 184 TL---------W---FDIYKNI--DKI--RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGG-HCNLETY 246 (293)
Q Consensus 184 ~~---------~---~~~~~~~--~~l--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-H~~~~~~ 246 (293)
.+ + ...|... ..+ .+..+|+|.+.+++|.++|.+..+.+.+.-.+. +...++... | ..-
T Consensus 320 rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k~~~~~~~~~~---~gy 395 (411)
T PF06500_consen 320 RLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-KALRIPSKPLH---MGY 395 (411)
T ss_dssp HCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSSHH---HHH
T ss_pred HhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-ceeecCCCccc---cch
Confidence 00 0 0112111 123 556789999999999999999987666654443 667776544 4 223
Q ss_pred hHHHHHHHHHHHHh
Q 022700 247 PEYIKHLRKFINAM 260 (293)
Q Consensus 247 ~~~~~~i~~fl~~~ 260 (293)
+..+..+.+||+..
T Consensus 396 ~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 396 PQALDEIYKWLEDK 409 (411)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 46778888998864
No 63
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=1e-18 Score=135.45 Aligned_cols=216 Identities=16% Similarity=0.153 Sum_probs=162.5
Q ss_pred CCceeEEEEccCCCEEEEEEEeCCC---CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCC----CC
Q 022700 41 KNMDCHLLETKNGNKIVATFWRHPF---ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTG----KP 113 (293)
Q Consensus 41 ~~~~~~~~~~~~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~----~~ 113 (293)
.++-.++++..+|.+|.+++..|.. ..|.||-.||+++....|..++.. ...||+|+.+|.||.|.+.. .+
T Consensus 54 ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~w--a~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 54 VEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHW--AVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred eEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccc--cccceeEEEEecccCCCccccCCCCC
Confidence 4455677888899999999998753 469999999999988777665543 45799999999999987731 11
Q ss_pred CC--------------C------chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhh
Q 022700 114 SE--------------F------NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILS 173 (293)
Q Consensus 114 ~~--------------~------~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~ 173 (293)
.. . ..+.|+..+++.+.....++.++|.+.|.|.||.+++.+++..|++++++..-|+++
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~ 211 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLS 211 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccc
Confidence 11 0 123678888888888778888999999999999999999999999999999999876
Q ss_pred hhhhccchh--------hhhhh-------------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcce
Q 022700 174 GIRVLYPVK--------MTLWF-------------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDP 232 (293)
Q Consensus 174 ~~~~~~~~~--------~~~~~-------------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 232 (293)
-.+...... ..++. ..++-.....++++|+|+..|-.|++|++...-..++++...+++
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i 291 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTI 291 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceE
Confidence 433221110 01111 123334455788999999999999999999999999999988888
Q ss_pred EEecCCCCCCCCCchHH-HHHHHHHHHHhh
Q 022700 233 LWVKGGGHCNLETYPEY-IKHLRKFINAME 261 (293)
Q Consensus 233 ~~~~~~~H~~~~~~~~~-~~~i~~fl~~~~ 261 (293)
.+++.-+|... +.+ .+.+..|++...
T Consensus 292 ~iy~~~aHe~~---p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 292 EIYPYFAHEGG---PGFQSRQQVHFLKILF 318 (321)
T ss_pred EEeeccccccC---cchhHHHHHHHHHhhc
Confidence 89988888543 433 344677776543
No 64
>PRK10115 protease 2; Provisional
Probab=99.80 E-value=9.2e-18 Score=153.20 Aligned_cols=222 Identities=14% Similarity=0.127 Sum_probs=163.0
Q ss_pred CCCceeEEEEccCCCEEEEE-EEeCC----CCceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCC-
Q 022700 40 DKNMDCHLLETKNGNKIVAT-FWRHP----FARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTG- 111 (293)
Q Consensus 40 ~~~~~~~~~~~~~g~~l~~~-~~~~~----~~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~- 111 (293)
....|.+.+++.||.+|.+. .++++ ++.|+||++||..+.. ..|......+ .++||.|+.+++||.|+-..
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l-~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSL-LDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHH-HHCCcEEEEEEcCCCCccCHH
Confidence 45678888999999999984 44442 4569999999977654 2355555555 77899999999999766542
Q ss_pred ------CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhcc----c
Q 022700 112 ------KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLY----P 180 (293)
Q Consensus 112 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~----~ 180 (293)
.......++|+.++++++.++--++++++.++|.|.||+++..++.+.|+ ++++|+..|+++....+. +
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p 571 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIP 571 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCC
Confidence 12233578999999999998866788999999999999999999999885 999999999988765431 1
Q ss_pred hhhh--------------hhhhcccChhhhhcCCCc-EEEEecCCCCccChhhHHHHHHHhcC---CcceEEe---cCCC
Q 022700 181 VKMT--------------LWFDIYKNIDKIRHVNCP-VLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWV---KGGG 239 (293)
Q Consensus 181 ~~~~--------------~~~~~~~~~~~l~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~ 239 (293)
.... .+...+.+...+.+++.| +|+++|.+|..|++.++.++..++.. ..+.+++ +++|
T Consensus 572 ~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~G 651 (686)
T PRK10115 572 LTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSG 651 (686)
T ss_pred CChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 1111 112235566677788889 56779999999999999999988854 3456777 8999
Q ss_pred CCCCCCchHHH---HHHHHHHHHhhh
Q 022700 240 HCNLETYPEYI---KHLRKFINAMEK 262 (293)
Q Consensus 240 H~~~~~~~~~~---~~i~~fl~~~~~ 262 (293)
|.......+.. .....||-....
T Consensus 652 Hg~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 652 HGGKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHhC
Confidence 98544333333 334566665543
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.80 E-value=8.6e-18 Score=134.83 Aligned_cols=218 Identities=15% Similarity=0.182 Sum_probs=142.8
Q ss_pred ceeEEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCCh-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCC---CCC
Q 022700 43 MDCHLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADL-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKP---SEF 116 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~---~~~ 116 (293)
.....+.++||..+...+..++ ..+|.||++||+.++. +.|...+..-+.+.||.|+++++||++.+.... ...
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~ 128 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHS 128 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecc
Confidence 3344777888877666565543 2468999999987655 445444444448899999999999999876322 233
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC---CccEEEEecchhhhhhhccchhhhhh-------
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ---KLRGVVLHSAILSGIRVLYPVKMTLW------- 186 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~~~~~~~~~~~~~~~~------- 186 (293)
...+|+..++++++... .+.++..+|.|+||.+...+..+.. .+.+.+.++..++.......+...++
T Consensus 129 G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~ 206 (345)
T COG0429 129 GETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRY 206 (345)
T ss_pred cchhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHH
Confidence 45699999999998876 4489999999999955555555432 35454444432221110000000000
Q ss_pred ------------------------------------------------------hhcccChhhhhcCCCcEEEEecCCCC
Q 022700 187 ------------------------------------------------------FDIYKNIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 187 ------------------------------------------------------~~~~~~~~~l~~i~~P~l~i~g~~D~ 212 (293)
...-.+...+++|.+|+|+|++.+|+
T Consensus 207 l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP 286 (345)
T COG0429 207 LLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDP 286 (345)
T ss_pred HHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCC
Confidence 00011355678899999999999999
Q ss_pred ccChhhHHHHHHHhcCCcceEEecCCCCCCCCC----chH--HHHHHHHHHHHhhh
Q 022700 213 IVDLSHGKRLWELSKEKYDPLWVKGGGHCNLET----YPE--YIKHLRKFINAMEK 262 (293)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~----~~~--~~~~i~~fl~~~~~ 262 (293)
+++++..-........++.+..-+.+||..+.. .+. ..+.+.+|++....
T Consensus 287 ~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 287 FMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 999877665555455566777789999985433 232 34678899987654
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=1.1e-17 Score=137.47 Aligned_cols=202 Identities=14% Similarity=0.139 Sum_probs=125.6
Q ss_pred ceeEEEEcc-CCCEEEEEEEeCC----CCceEEEEEcCCCCChhhHHH--HHHHHHhhcCeeEEEEcc--ccccCCCCC-
Q 022700 43 MDCHLLETK-NGNKIVATFWRHP----FARFTLLYSHGNAADLGQMLE--LFIELRAHLRVNIMSYDY--SGYGASTGK- 112 (293)
Q Consensus 43 ~~~~~~~~~-~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~--~~~~~~~~~g~~v~~~d~--~g~G~s~~~- 112 (293)
.+...+.+. .+..+.+.++.|+ ++.|+|+++||++++...|.. .+..++.+.|+.|+++|. +|+|.+...
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~ 92 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDD 92 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcc
Confidence 334444333 3555666666553 357999999999988877743 345676778999999998 454432200
Q ss_pred -----------------CC--CCchhhhHHH-HHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecch
Q 022700 113 -----------------PS--EFNTYYDIEA-VYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAI 171 (293)
Q Consensus 113 -----------------~~--~~~~~~d~~~-~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~ 171 (293)
+. .......+.+ +...+.+.++++.++++++||||||.+++.++..+|+ ++++++++|+
T Consensus 93 ~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 93 AWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 00 0011222233 3333444466777899999999999999999999995 8999999988
Q ss_pred hhhhhhccc--hhhhhhhh------cccChhhhh--cCCCcEEEEecCCCCccCh-hhHHHHHHHhc---CCcceEEecC
Q 022700 172 LSGIRVLYP--VKMTLWFD------IYKNIDKIR--HVNCPVLVIHGTNDDIVDL-SHGKRLWELSK---EKYDPLWVKG 237 (293)
Q Consensus 172 ~~~~~~~~~--~~~~~~~~------~~~~~~~l~--~i~~P~l~i~g~~D~~~~~-~~~~~~~~~~~---~~~~~~~~~~ 237 (293)
.+....... ....++.+ ..+....+. ....|+++.+|+.|..++. .....+.+.+. ...++..+++
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g 252 (275)
T TIGR02821 173 VAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAG 252 (275)
T ss_pred cCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCC
Confidence 653211000 00001000 111122222 2457899999999999998 45555655553 3457788899
Q ss_pred CCCCCCC
Q 022700 238 GGHCNLE 244 (293)
Q Consensus 238 ~~H~~~~ 244 (293)
.+|.+..
T Consensus 253 ~~H~f~~ 259 (275)
T TIGR02821 253 YDHSYYF 259 (275)
T ss_pred CCccchh
Confidence 9998743
No 67
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.80 E-value=2.7e-19 Score=132.66 Aligned_cols=203 Identities=21% Similarity=0.291 Sum_probs=144.4
Q ss_pred CCCEEEEEEEeCCCCceEEEEEcCC-CCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC---chhhhHHHHHH
Q 022700 52 NGNKIVATFWRHPFARFTLLYSHGN-AADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF---NTYYDIEAVYN 127 (293)
Q Consensus 52 ~g~~l~~~~~~~~~~~~~vv~~hG~-~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~---~~~~d~~~~i~ 127 (293)
+|+++.+..+. .....|+++.|. |+...+|.+.+..+.....+.|++.|-||+|.|.++.... ...+|.+.+++
T Consensus 29 ng~ql~y~~~G--~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avd 106 (277)
T KOG2984|consen 29 NGTQLGYCKYG--HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVD 106 (277)
T ss_pred cCceeeeeecC--CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHH
Confidence 57788755553 344567788884 5566788888888877777999999999999998543322 23467777776
Q ss_pred HHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchh----------hhhhhccchh--------------
Q 022700 128 CLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAIL----------SGIRVLYPVK-------------- 182 (293)
Q Consensus 128 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~----------~~~~~~~~~~-------------- 182 (293)
-+ +.+.. +++.++|+|-||..|+..|++++. |..+|+.+... .+++....+.
T Consensus 107 LM-~aLk~--~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e 183 (277)
T KOG2984|consen 107 LM-EALKL--EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPE 183 (277)
T ss_pred HH-HHhCC--CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHH
Confidence 44 55544 899999999999999999999985 88888887521 1121111111
Q ss_pred -----hhhhhhccc----------ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch
Q 022700 183 -----MTLWFDIYK----------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP 247 (293)
Q Consensus 183 -----~~~~~~~~~----------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 247 (293)
...|.+..+ -...+.+++||+|+++|++|++++..+.-.+-...+.. ++.+.|.++|.++...+
T Consensus 184 ~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn~hLrya 262 (277)
T KOG2984|consen 184 TFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHNFHLRYA 262 (277)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCcceeeech
Confidence 111221110 12356789999999999999999988766555555554 88899999999866554
Q ss_pred -HHHHHHHHHHHHh
Q 022700 248 -EYIKHLRKFINAM 260 (293)
Q Consensus 248 -~~~~~i~~fl~~~ 260 (293)
+|.+.+.+||++.
T Consensus 263 ~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 263 KEFNKLVLDFLKST 276 (277)
T ss_pred HHHHHHHHHHHhcc
Confidence 7999999999753
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.80 E-value=1.5e-18 Score=147.77 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=131.3
Q ss_pred ceEEEEEcCCCCChhhH-----HHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchh-hhHHHHHHHHHHHhcCCCccE
Q 022700 67 RFTLLYSHGNAADLGQM-----LELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTY-YDIEAVYNCLKREYNVKQEEL 140 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~-----~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~-~d~~~~i~~l~~~~~~~~~~i 140 (293)
+++||++||...+...+ ..++..+ .+.||.|+++|++|+|.+.......... +++.+++++++++.+. +++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L-~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~--~~i 138 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGL-LERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKL--DQI 138 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHH-HHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCC--Ccc
Confidence 45799999975443222 4566666 7899999999999998876433322222 4578889999988765 799
Q ss_pred EEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh----------------------------------ccchh--h
Q 022700 141 ILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV----------------------------------LYPVK--M 183 (293)
Q Consensus 141 ~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~----------------------------------~~~~~--~ 183 (293)
+++||||||.+++.+++.+| +++++++++|..+.... +.+.. .
T Consensus 139 ~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~ 218 (350)
T TIGR01836 139 SLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGY 218 (350)
T ss_pred cEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhh
Confidence 99999999999999999888 59999999875542100 00000 0
Q ss_pred -----------------h-----hhhhcc-c----------------------------ChhhhhcCCCcEEEEecCCCC
Q 022700 184 -----------------T-----LWFDIY-K----------------------------NIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 184 -----------------~-----~~~~~~-~----------------------------~~~~l~~i~~P~l~i~g~~D~ 212 (293)
. .|.... . ....++++++|+++++|++|.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~ 298 (350)
T TIGR01836 219 QKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDH 298 (350)
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCC
Confidence 0 000000 0 011355789999999999999
Q ss_pred ccChhhHHHHHHHhcCC-cceEEecCCCCCC-CCCc---hHHHHHHHHHHHH
Q 022700 213 IVDLSHGKRLWELSKEK-YDPLWVKGGGHCN-LETY---PEYIKHLRKFINA 259 (293)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~-~~~~---~~~~~~i~~fl~~ 259 (293)
+++++.++.+.+.++.. .++++++ +||.. +.+. ++++..|.+||.+
T Consensus 299 i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 299 LVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred cCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 99999999999988753 3555566 68876 3332 3688999999865
No 69
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.79 E-value=3.1e-18 Score=135.48 Aligned_cols=164 Identities=13% Similarity=0.134 Sum_probs=112.6
Q ss_pred CCceEEEEEcCCCCChhhHHH--HHHHHHhhcCeeEEEEccccccCCCCCC---------CCCchhhhHHHHHHHHHHHh
Q 022700 65 FARFTLLYSHGNAADLGQMLE--LFIELRAHLRVNIMSYDYSGYGASTGKP---------SEFNTYYDIEAVYNCLKREY 133 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~--~~~~~~~~~g~~v~~~d~~g~G~s~~~~---------~~~~~~~d~~~~i~~l~~~~ 133 (293)
++.|+||++||.+++...+.. .+..++.+.||.|+++|++|++.+.... .......++..+++++.+++
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 367999999999988776642 2556667789999999999987543211 01123467888999999888
Q ss_pred cCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhcc-c--------hhhhhhhhcccC-hhhhhcCCCc
Q 022700 134 NVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLY-P--------VKMTLWFDIYKN-IDKIRHVNCP 202 (293)
Q Consensus 134 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~-~--------~~~~~~~~~~~~-~~~l~~i~~P 202 (293)
++++++++|+|||+||.+++.++..+|+ +.+++.+++......... . .....+.+.... .........|
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 170 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPI 170 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCe
Confidence 8888899999999999999999999995 788877776532111000 0 000001111000 0111223445
Q ss_pred EEEEecCCCCccChhhHHHHHHHhcC
Q 022700 203 VLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 203 ~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
++++||++|.+|+++.++.+.+.+..
T Consensus 171 ~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 171 MSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred EEEEEcCCCceeCcchHHHHHHHHHH
Confidence 78999999999999999999887754
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=2.7e-17 Score=131.07 Aligned_cols=199 Identities=17% Similarity=0.167 Sum_probs=152.1
Q ss_pred eEEEEccCCCEEEEEEEeCCCC--ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc-cCCCCCC--------
Q 022700 45 CHLLETKNGNKIVATFWRHPFA--RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY-GASTGKP-------- 113 (293)
Q Consensus 45 ~~~~~~~~g~~l~~~~~~~~~~--~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~-G~s~~~~-------- 113 (293)
.+.+...+ ..+.++...|.+. .|.||++|+..+-.........++ +..||.|+++|+-+. |.+....
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rl-A~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRL-AKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHH-HhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 45666766 7788888877643 389999999999888888888888 889999999998763 2222111
Q ss_pred ------CCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhh
Q 022700 114 ------SEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWF 187 (293)
Q Consensus 114 ------~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~ 187 (293)
.......|+.+.++++..+...+.++|+++|+||||.+++.++...|++++.+...|....
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~------------- 148 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA------------- 148 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC-------------
Confidence 0112347888999999877656778999999999999999999999999999987765431
Q ss_pred hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCC---cceEEecCCCCCCCCCc------------hHHHHH
Q 022700 188 DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEK---YDPLWVKGGGHCNLETY------------PEYIKH 252 (293)
Q Consensus 188 ~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~~~------------~~~~~~ 252 (293)
.......++++|+++++|+.|..++......+.+.+... .++.+++++.|.+.... +..++.
T Consensus 149 ---~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~ 225 (236)
T COG0412 149 ---DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQR 225 (236)
T ss_pred ---CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHH
Confidence 112235678999999999999999999888887777543 57788999989886331 136788
Q ss_pred HHHHHHHhh
Q 022700 253 LRKFINAME 261 (293)
Q Consensus 253 i~~fl~~~~ 261 (293)
+.+|+++..
T Consensus 226 ~~~ff~~~~ 234 (236)
T COG0412 226 VLAFFKRLL 234 (236)
T ss_pred HHHHHHHhc
Confidence 888988764
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.79 E-value=2.7e-17 Score=135.57 Aligned_cols=203 Identities=13% Similarity=0.160 Sum_probs=124.1
Q ss_pred CCceeEEEEc-cCCCEEEEEEEeCC----CCceEEEEEcCCCCChhhHHHH--HHHHHhhcCeeEEEEccccccC-----
Q 022700 41 KNMDCHLLET-KNGNKIVATFWRHP----FARFTLLYSHGNAADLGQMLEL--FIELRAHLRVNIMSYDYSGYGA----- 108 (293)
Q Consensus 41 ~~~~~~~~~~-~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~--~~~~~~~~g~~v~~~d~~g~G~----- 108 (293)
..++...+.+ .-|..+.+..+.|+ .+.|+|+++||++++...|... +..++...|+.|+.+|..++|.
T Consensus 16 ~~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 16 GFNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 3444545544 34566776666543 3579999999999887666432 3455577899999999876652
Q ss_pred CCC-----CC------CC-----Cchhh-hHHHHHHHHHHHh-cCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEec
Q 022700 109 STG-----KP------SE-----FNTYY-DIEAVYNCLKREY-NVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHS 169 (293)
Q Consensus 109 s~~-----~~------~~-----~~~~~-d~~~~i~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~ 169 (293)
+.. .. .. ..... ...++..++.+.+ .++.++++++||||||.+|+.++.++|+ ++++++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 175 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFA 175 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEEC
Confidence 110 00 00 01011 1222223333322 2466889999999999999999999995 89999999
Q ss_pred chhhhhhhccc--hhhhhh------hhcccC---hhhhhcCCCcEEEEecCCCCccChh-hHHHHHHHh---cCCcceEE
Q 022700 170 AILSGIRVLYP--VKMTLW------FDIYKN---IDKIRHVNCPVLVIHGTNDDIVDLS-HGKRLWELS---KEKYDPLW 234 (293)
Q Consensus 170 p~~~~~~~~~~--~~~~~~------~~~~~~---~~~l~~i~~P~l~i~g~~D~~~~~~-~~~~~~~~~---~~~~~~~~ 234 (293)
|..+....... ....++ .+.++. ...+...++|+++++|++|.+++.. .++.+.+.+ +...++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~ 255 (283)
T PLN02442 176 PIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRL 255 (283)
T ss_pred CccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEE
Confidence 88652211000 000000 111222 2334456889999999999998863 345555444 44567888
Q ss_pred ecCCCCCCC
Q 022700 235 VKGGGHCNL 243 (293)
Q Consensus 235 ~~~~~H~~~ 243 (293)
+++.+|...
T Consensus 256 ~pg~~H~~~ 264 (283)
T PLN02442 256 QPGYDHSYF 264 (283)
T ss_pred eCCCCccHH
Confidence 999999643
No 72
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.78 E-value=1e-17 Score=130.41 Aligned_cols=208 Identities=19% Similarity=0.210 Sum_probs=135.1
Q ss_pred EEEEccCCCEEEEEEEeC-CCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCc----hhh
Q 022700 46 HLLETKNGNKIVATFWRH-PFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFN----TYY 120 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~----~~~ 120 (293)
+.++..++ .+..|+-.+ ...+|++++.||++.+.-.|..+...+.......++++|+||||++.-+....- ...
T Consensus 53 v~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~K 131 (343)
T KOG2564|consen 53 VSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSK 131 (343)
T ss_pred cccCCCcc-eEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHH
Confidence 33444443 466555554 457899999999999999999999999888788899999999999875443332 234
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh--cCCccEEEEecchhh----hhhh-----------------
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR--LQKLRGVVLHSAILS----GIRV----------------- 177 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~v~~~i~~~p~~~----~~~~----------------- 177 (293)
|+.++++ +.++-.+.+|+|+||||||.+|...|.. .|.+.+++.+.-+-. .+..
T Consensus 132 D~~~~i~---~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si~~ 208 (343)
T KOG2564|consen 132 DFGAVIK---ELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSIED 208 (343)
T ss_pred HHHHHHH---HHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccchhh
Confidence 4444444 4444455789999999999999887765 357888888763110 0000
Q ss_pred --------------------------------------ccchhhhhhhhcccCh-hhhhcCCCcEEEEecCCCCccChhh
Q 022700 178 --------------------------------------LYPVKMTLWFDIYKNI-DKIRHVNCPVLVIHGTNDDIVDLSH 218 (293)
Q Consensus 178 --------------------------------------~~~~~~~~~~~~~~~~-~~l~~i~~P~l~i~g~~D~~~~~~~ 218 (293)
-......||...|... +..-...+|-++|-+..|..- .+.
T Consensus 209 Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~Fl~~p~~klLilAg~d~LD-kdL 287 (343)
T KOG2564|consen 209 AIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKFLGLPVPKLLILAGVDRLD-KDL 287 (343)
T ss_pred HHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHhhCCCccceeEEecccccC-cce
Confidence 0001123344444322 222344566666666555431 111
Q ss_pred HHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHHhh
Q 022700 219 GKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~ 261 (293)
..-.+++..++.+++.+||+.+++.| ++...+..|+.++.
T Consensus 288 ---tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 288 ---TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred ---eeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 01123455688899999999999888 68888999998765
No 73
>PRK10162 acetyl esterase; Provisional
Probab=99.78 E-value=5.8e-17 Score=135.85 Aligned_cols=213 Identities=16% Similarity=0.214 Sum_probs=142.7
Q ss_pred CceeEEEEccCCCEEEEEEEeCC-CCceEEEEEcCCC---CChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCc
Q 022700 42 NMDCHLLETKNGNKIVATFWRHP-FARFTLLYSHGNA---ADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFN 117 (293)
Q Consensus 42 ~~~~~~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~---~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~ 117 (293)
..+.+.+...+| .+.+.++.+. ...|+||++||++ ++...+...+..++...|+.|+.+|||...+.. ...
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~----~p~ 130 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR----FPQ 130 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC----CCC
Confidence 366677777777 4777666553 3568999999977 444566677788866679999999999654332 223
Q ss_pred hhhhHHHHHHHHHH---HhcCCCccEEEEEeccChHHHHHHHHhc-------CCccEEEEecchhhhhhhcc--------
Q 022700 118 TYYDIEAVYNCLKR---EYNVKQEELILYGQSVGSGPTLHLASRL-------QKLRGVVLHSAILSGIRVLY-------- 179 (293)
Q Consensus 118 ~~~d~~~~i~~l~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~i~~~p~~~~~~~~~-------- 179 (293)
..+|+.++++|+.+ .+++++++|+|+|+|+||.+++.++... +.++++++++|+.+......
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~ 210 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVW 210 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCc
Confidence 56888888888765 4677778999999999999999988753 35899999999765321100
Q ss_pred -ch---hhhhhhhcc--------cC-----hhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCC
Q 022700 180 -PV---KMTLWFDIY--------KN-----IDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGG 239 (293)
Q Consensus 180 -~~---~~~~~~~~~--------~~-----~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 239 (293)
.. ...++.+.| ++ ...+.+.-.|+++++|+.|.+. +.++.+.+++.. .+++.++++..
T Consensus 211 ~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~ 288 (318)
T PRK10162 211 DGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTL 288 (318)
T ss_pred cccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCc
Confidence 00 000000001 00 0112122359999999999876 456777776643 46888999999
Q ss_pred CCCCCCc------hHHHHHHHHHHHHhh
Q 022700 240 HCNLETY------PEYIKHLRKFINAME 261 (293)
Q Consensus 240 H~~~~~~------~~~~~~i~~fl~~~~ 261 (293)
|.+.... .+..+.+.+||++..
T Consensus 289 H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 289 HAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred eehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 9864221 246677778887654
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.77 E-value=5e-17 Score=121.89 Aligned_cols=208 Identities=18% Similarity=0.267 Sum_probs=143.1
Q ss_pred EEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC---chhhh
Q 022700 46 HLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF---NTYYD 121 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~---~~~~d 121 (293)
+.+..+.+..+.... ...++..++|++||+-++... +...++..+++.||.++.+|++|.|+|.+....- ...+|
T Consensus 13 ivi~n~~ne~lvg~l-h~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadD 91 (269)
T KOG4667|consen 13 IVIPNSRNEKLVGLL-HETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADD 91 (269)
T ss_pred EEeccCCCchhhcce-eccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHH
Confidence 444555555554422 224678999999999887744 2334444448999999999999999998755432 23478
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhcc-chhhhh---hh-----hc---
Q 022700 122 IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLY-PVKMTL---WF-----DI--- 189 (293)
Q Consensus 122 ~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~-~~~~~~---~~-----~~--- 189 (293)
+..+++++.... ..--+++|||-||.+++.++.+++.++.+|-+++-.+...... ...+.+ .. +.
T Consensus 92 L~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 92 LHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred HHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcc
Confidence 888888886521 1234889999999999999999999888988887554322211 111100 00 00
Q ss_pred ---cc-------Chhhh--------h--cCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHH
Q 022700 190 ---YK-------NIDKI--------R--HVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEY 249 (293)
Q Consensus 190 ---~~-------~~~~l--------~--~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~ 249 (293)
|. .++.+ . ..+||+|-+||..|.+||.+.+..+++.+++ .++.++||++|.+...+.+.
T Consensus 169 kG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt~~q~~l 247 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYTGHQSQL 247 (269)
T ss_pred cCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCccchhhhH
Confidence 00 01111 1 2379999999999999999999999999998 59999999999986655555
Q ss_pred HHHHHHHHH
Q 022700 250 IKHLRKFIN 258 (293)
Q Consensus 250 ~~~i~~fl~ 258 (293)
......|..
T Consensus 248 ~~lgl~f~k 256 (269)
T KOG4667|consen 248 VSLGLEFIK 256 (269)
T ss_pred hhhcceeEE
Confidence 555555554
No 75
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.77 E-value=1.4e-17 Score=134.51 Aligned_cols=127 Identities=20% Similarity=0.256 Sum_probs=94.9
Q ss_pred EEEEccCCCEEEEEEEeCCC--CceEEEEEcCCCCCh----hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC---
Q 022700 46 HLLETKNGNKIVATFWRHPF--ARFTLLYSHGNAADL----GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF--- 116 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~~--~~~~vv~~hG~~~~~----~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~--- 116 (293)
++++...|... ++++.+.+ ++++||++||+++.. ..|..+...+ .+.||.|+++|+||||.|.+.....
T Consensus 3 ~~l~~~~g~~~-~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~L-a~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~ 80 (266)
T TIGR03101 3 FFLDAPHGFRF-CLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAF-AAGGFGVLQIDLYGCGDSAGDFAAARWD 80 (266)
T ss_pred EEecCCCCcEE-EEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCccccCCHH
Confidence 56667677654 55555443 368999999998643 3344455666 6789999999999999997644332
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV 177 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~ 177 (293)
...+|+..+++++++. +. .+++++||||||.+++.++.++| +++++|+++|+.++...
T Consensus 81 ~~~~Dv~~ai~~L~~~-~~--~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~ 139 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQ-GH--PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQ 139 (266)
T ss_pred HHHHHHHHHHHHHHhc-CC--CCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHH
Confidence 2347777888888654 43 78999999999999999999987 59999999998775433
No 76
>PLN00021 chlorophyllase
Probab=99.77 E-value=3.7e-17 Score=135.61 Aligned_cols=179 Identities=16% Similarity=0.085 Sum_probs=123.0
Q ss_pred EEEEEEEeCC--CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHH
Q 022700 55 KIVATFWRHP--FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKRE 132 (293)
Q Consensus 55 ~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~ 132 (293)
.+.+..+.|. +..|+|||+||++.+...|...+..+ ++.||.|+++|++|++... .....++..++++|+.+.
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~L-as~G~~VvapD~~g~~~~~----~~~~i~d~~~~~~~l~~~ 112 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHI-ASHGFIVVAPQLYTLAGPD----GTDEIKDAAAVINWLSSG 112 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHH-HhCCCEEEEecCCCcCCCC----chhhHHHHHHHHHHHHhh
Confidence 3444455443 45799999999999888888888887 7789999999999864322 223446677777777653
Q ss_pred h--------cCCCccEEEEEeccChHHHHHHHHhcC------CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhc
Q 022700 133 Y--------NVKQEELILYGQSVGSGPTLHLASRLQ------KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRH 198 (293)
Q Consensus 133 ~--------~~~~~~i~l~G~S~Gg~~a~~~a~~~p------~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (293)
+ ..+.++++++|||+||.+++.++..++ +++++++++|+......... .... +......-.
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~--~p~i---l~~~~~s~~ 187 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQT--PPPV---LTYAPHSFN 187 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCC--CCcc---cccCccccc
Confidence 2 234578999999999999999998876 47899999987543211000 0000 011112223
Q ss_pred CCCcEEEEecCCCC-----c----cChh-hHHHHHHHhcCCcceEEecCCCCCCC
Q 022700 199 VNCPVLVIHGTNDD-----I----VDLS-HGKRLWELSKEKYDPLWVKGGGHCNL 243 (293)
Q Consensus 199 i~~P~l~i~g~~D~-----~----~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~ 243 (293)
+.+|+|++.+..|. . .+.. +-.++++.++......+++++||..+
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~ 242 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDM 242 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCccee
Confidence 67999999998663 2 2233 33778888887778888999999965
No 77
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.76 E-value=6.1e-18 Score=135.41 Aligned_cols=155 Identities=21% Similarity=0.349 Sum_probs=115.5
Q ss_pred eeEEEEccccccCCCC---CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecch
Q 022700 96 VNIMSYDYSGYGASTG---KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAI 171 (293)
Q Consensus 96 ~~v~~~d~~g~G~s~~---~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~ 171 (293)
|.|+++|+||+|.|++ ........+++.+.++.+++++++ ++++++||||||.+++.+++.+|+ +++++++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999995 344555678999999999999987 679999999999999999999995 9999999984
Q ss_pred --hhh---hhhccc-hh--------------------hh-----------------------hhhh--------------
Q 022700 172 --LSG---IRVLYP-VK--------------------MT-----------------------LWFD-------------- 188 (293)
Q Consensus 172 --~~~---~~~~~~-~~--------------------~~-----------------------~~~~-------------- 188 (293)
... ...... .. .. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 100 000000 00 00 0000
Q ss_pred -----cccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHH
Q 022700 189 -----IYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHL 253 (293)
Q Consensus 189 -----~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i 253 (293)
..+....+..+++|+++++|++|.++|++....+.+.+++. ++++++++||..+.+.+ ++.+.|
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNS-QLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTE-EEEEETTCCSTHHHHSHHHHHHHH
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCC-EEEECCCCChHHHhcCHHhhhhhh
Confidence 00112345678999999999999999999999988888774 89999999999865555 454444
No 78
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=1.1e-16 Score=126.93 Aligned_cols=181 Identities=24% Similarity=0.265 Sum_probs=108.4
Q ss_pred eCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEcccc------ccCC--CC------CCCCCchh-------h
Q 022700 62 RHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSG------YGAS--TG------KPSEFNTY-------Y 120 (293)
Q Consensus 62 ~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g------~G~s--~~------~~~~~~~~-------~ 120 (293)
+.....++||++||+|++...+..............+++++-|. .|.. .+ ........ +
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 33456899999999999986665554423234566677775542 1220 10 01110111 2
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcC
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHV 199 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 199 (293)
.+.++++...+ .++++++|+++|+|+||.+++.++..+| .+.++|.+++.+...... .......
T Consensus 89 ~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------~~~~~~~ 153 (216)
T PF02230_consen 89 RLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------EDRPEAL 153 (216)
T ss_dssp HHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------HCCHCCC
T ss_pred HHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------ccccccc
Confidence 23333443332 3477789999999999999999999998 499999999876421110 1111111
Q ss_pred -CCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 200 -NCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 200 -~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
.+|++++||+.|+++|.+.++...+.+.. ..++..|++.||.. .++....+.+||++.
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---SPEELRDLREFLEKH 215 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----HHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---CHHHHHHHHHHHhhh
Confidence 67999999999999999999988888754 35678899999965 357788899999864
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=2.7e-16 Score=130.81 Aligned_cols=222 Identities=14% Similarity=0.204 Sum_probs=149.2
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCC--------CCceEEEEEcCCCCCh-hhHHHHHHHHHhhcCeeEEEEccccccCC
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHP--------FARFTLLYSHGNAADL-GQMLELFIELRAHLRVNIMSYDYSGYGAS 109 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~--------~~~~~vv~~hG~~~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s 109 (293)
....++...++.+||..+..-+..++ +..|+||++||+.+++ +.+-..+...+.+.||.+++++.||+|.+
T Consensus 89 p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 89 PPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCC
Confidence 34567778889999999888776433 2469999999987654 45555555556899999999999999988
Q ss_pred CCCCC---CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC---C-ccEEEEecchhhh--hhhc-c
Q 022700 110 TGKPS---EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ---K-LRGVVLHSAILSG--IRVL-Y 179 (293)
Q Consensus 110 ~~~~~---~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~i~~~p~~~~--~~~~-~ 179 (293)
.-... .....+|+.++++++++++. ..++..+|.||||.+...+..+.. . +.++.+.+|+-.. .+.. .
T Consensus 169 ~LtTpr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~ 246 (409)
T KOG1838|consen 169 KLTTPRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIET 246 (409)
T ss_pred ccCCCceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhc
Confidence 63332 23456999999999999984 479999999999999999998765 2 5666666665321 0000 0
Q ss_pred chh-------------------hh-h-----------------------------------hhhcccChhhhhcCCCcEE
Q 022700 180 PVK-------------------MT-L-----------------------------------WFDIYKNIDKIRHVNCPVL 204 (293)
Q Consensus 180 ~~~-------------------~~-~-----------------------------------~~~~~~~~~~l~~i~~P~l 204 (293)
+.. .. + +.+.-.+...+.+|++|+|
T Consensus 247 ~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L 326 (409)
T KOG1838|consen 247 PLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLL 326 (409)
T ss_pred ccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEE
Confidence 000 00 0 0001123567788999999
Q ss_pred EEecCCCCccChhhHHHHHHHhcC-CcceEEecCCCCCCCCCc----h-HHHHH-HHHHHHHhhhc
Q 022700 205 VIHGTNDDIVDLSHGKRLWELSKE-KYDPLWVKGGGHCNLETY----P-EYIKH-LRKFINAMEKL 263 (293)
Q Consensus 205 ~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~----~-~~~~~-i~~fl~~~~~~ 263 (293)
+|++.+|+++|.+..- ..+...+ .+-+.+-..+||....+. + .+.+. +.+|+......
T Consensus 327 ~ina~DDPv~p~~~ip-~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~~ 391 (409)
T KOG1838|consen 327 CINAADDPVVPEEAIP-IDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIFQ 391 (409)
T ss_pred EEecCCCCCCCcccCC-HHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHhh
Confidence 9999999999886321 1111222 333444577899864333 2 35555 88888876643
No 80
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.75 E-value=6.4e-17 Score=141.99 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=127.9
Q ss_pred EEEEEEEeCCC---CceEEEEEcCCCCChhhHH-----HHHHHHHhhcCeeEEEEccccccCCCCCCCCC-chhhhHHHH
Q 022700 55 KIVATFWRHPF---ARFTLLYSHGNAADLGQML-----ELFIELRAHLRVNIMSYDYSGYGASTGKPSEF-NTYYDIEAV 125 (293)
Q Consensus 55 ~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~~-----~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~-~~~~d~~~~ 125 (293)
.+..+.|.+.. .+++||++||+......+. .++..+ .+.||.|+++|++|+|.+....... ...+++.++
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L-~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~a 251 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWL-VEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAA 251 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHH-HHCCcEEEEEECCCCCcccccCChhhhHHHHHHHH
Confidence 45555665543 4688999999876554442 456666 7789999999999999886443332 233568888
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHH----HHHhc-C-CccEEEEecchhhhhhh----------------------
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLH----LASRL-Q-KLRGVVLHSAILSGIRV---------------------- 177 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~-p-~v~~~i~~~p~~~~~~~---------------------- 177 (293)
++++++..+. ++++++||||||.++.. +++.. + +++++++++...+....
T Consensus 252 l~~v~~~~g~--~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~ 329 (532)
T TIGR01838 252 LEVVEAITGE--KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGG 329 (532)
T ss_pred HHHHHHhcCC--CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhc
Confidence 9999888765 89999999999998632 34444 5 59999998864331100
Q ss_pred --------------ccch--------------------hhhhhh----------------hcc-------------cChh
Q 022700 178 --------------LYPV--------------------KMTLWF----------------DIY-------------KNID 194 (293)
Q Consensus 178 --------------~~~~--------------------~~~~~~----------------~~~-------------~~~~ 194 (293)
+.+. ...+|. +.| ....
T Consensus 330 G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~ 409 (532)
T TIGR01838 330 GYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRL 409 (532)
T ss_pred CCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEec
Confidence 0000 000011 000 0124
Q ss_pred hhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCC
Q 022700 195 KIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNL 243 (293)
Q Consensus 195 ~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 243 (293)
.+.++++|+++++|++|.++|.+.+..+.+.+++. +..+++++||...
T Consensus 410 dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~-~~~vL~~sGHi~~ 457 (532)
T TIGR01838 410 DLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGP-KTFVLGESGHIAG 457 (532)
T ss_pred chhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCC-EEEEECCCCCchH
Confidence 56788999999999999999999999998888865 7778899999953
No 81
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=4.9e-17 Score=130.85 Aligned_cols=193 Identities=14% Similarity=0.161 Sum_probs=132.6
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcC--CCccEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNV--KQEELIL 142 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~--~~~~i~l 142 (293)
...|+++++||+.++...|..+...+....+-.|+++|.|.||.|+...... +..+...+.++++..+- ...++.+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~--~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHN--YEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccC--HHHHHHHHHHHHHHcccccccCCcee
Confidence 4689999999999999999999999988888999999999999998433222 33444434333333321 2368999
Q ss_pred EEeccCh-HHHHHHHHhcCC-ccEEEEec--ch-hh-----------hhhhccch----------------------hhh
Q 022700 143 YGQSVGS-GPTLHLASRLQK-LRGVVLHS--AI-LS-----------GIRVLYPV----------------------KMT 184 (293)
Q Consensus 143 ~G~S~Gg-~~a~~~a~~~p~-v~~~i~~~--p~-~~-----------~~~~~~~~----------------------~~~ 184 (293)
+|||||| .+++..+...|. +..+|+.. |. .. .+...... ...
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 666666777774 66666543 31 00 00000000 000
Q ss_pred hhhhcc----------------------------cChhhh--hcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEE
Q 022700 185 LWFDIY----------------------------KNIDKI--RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLW 234 (293)
Q Consensus 185 ~~~~~~----------------------------~~~~~l--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
+....+ .....+ .....|++++.|.++..++.+.-.++...++. +++..
T Consensus 208 fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ 286 (315)
T KOG2382|consen 208 FILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHE 286 (315)
T ss_pred HHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccc-hheee
Confidence 000000 011112 34568999999999999999988888887776 59999
Q ss_pred ecCCCCCCCCCch-HHHHHHHHHHHHh
Q 022700 235 VKGGGHCNLETYP-EYIKHLRKFINAM 260 (293)
Q Consensus 235 ~~~~~H~~~~~~~-~~~~~i~~fl~~~ 260 (293)
++++||+.+.+.| ++.+.|.+|+...
T Consensus 287 ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 287 LDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999988888 5899999998754
No 82
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=9.5e-16 Score=120.71 Aligned_cols=160 Identities=23% Similarity=0.297 Sum_probs=123.4
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
+..+||-+||.+++..+|......| .+.|++++.++|||+|.+.+.+.....-.+-...+..+.+.++++ ++++++||
T Consensus 34 ~~gTVv~~hGsPGSH~DFkYi~~~l-~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gH 111 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHNDFKYIRPPL-DEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-GKLIFLGH 111 (297)
T ss_pred CceeEEEecCCCCCccchhhhhhHH-HHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-CceEEEEe
Confidence 3568999999999999999888887 999999999999999999988877777788888999999999986 78999999
Q ss_pred ccChHHHHHHHHhcCCccEEEEecchhhh-------------hhhccchhhhhhh-------------------------
Q 022700 146 SVGSGPTLHLASRLQKLRGVVLHSAILSG-------------IRVLYPVKMTLWF------------------------- 187 (293)
Q Consensus 146 S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~-------------~~~~~~~~~~~~~------------------------- 187 (293)
|.|+-.|+.++..+| ..++++++|.--. +...+.....+..
T Consensus 112 SrGcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~ 190 (297)
T PF06342_consen 112 SRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAM 190 (297)
T ss_pred ccchHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHH
Confidence 999999999999997 6699999873210 0000000000000
Q ss_pred ---------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC
Q 022700 188 ---------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 188 ---------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
.....++.+.+-++|+++++|.+|.++..+.+.++...+.+
T Consensus 191 r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~ 240 (297)
T PF06342_consen 191 RSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKG 240 (297)
T ss_pred HHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCC
Confidence 01112455666679999999999999988887777666543
No 83
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.72 E-value=5e-16 Score=132.69 Aligned_cols=205 Identities=14% Similarity=0.081 Sum_probs=139.1
Q ss_pred CCEEEEEEEeCC--CCceEEEEEcCCCCChh-------------hHHHHHHH--HHhhcCeeEEEEccccccCCC-----
Q 022700 53 GNKIVATFWRHP--FARFTLLYSHGNAADLG-------------QMLELFIE--LRAHLRVNIMSYDYSGYGAST----- 110 (293)
Q Consensus 53 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~-------------~~~~~~~~--~~~~~g~~v~~~d~~g~G~s~----- 110 (293)
..+|.|..+... ...++||++|++.++.. .|..++.. .+....|-|+++|..|-+.|.
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 356677766543 34699999999988542 13333321 124556889999999876521
Q ss_pred --CC----C---------CCCchhhhHHHHHHHHHHHhcCCCccEE-EEEeccChHHHHHHHHhcC-CccEEEEecchhh
Q 022700 111 --GK----P---------SEFNTYYDIEAVYNCLKREYNVKQEELI-LYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS 173 (293)
Q Consensus 111 --~~----~---------~~~~~~~d~~~~i~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~ 173 (293)
++ + .....++|+.+.+..+.+++++ +++. ++||||||.+++.++.++| +++++|+++....
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 10 1 1113457777777788888887 7775 9999999999999999999 5999999864210
Q ss_pred --------hhh---h------------c----cch--------------------hhhhhh-------------------
Q 022700 174 --------GIR---V------------L----YPV--------------------KMTLWF------------------- 187 (293)
Q Consensus 174 --------~~~---~------------~----~~~--------------------~~~~~~------------------- 187 (293)
... . + .+. ...+..
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 000 0 0 000 000000
Q ss_pred -----------hcc----------------------cChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---Ccc
Q 022700 188 -----------DIY----------------------KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYD 231 (293)
Q Consensus 188 -----------~~~----------------------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~ 231 (293)
..+ +..+.+.++++|+|+|+|++|.++|++.++.+.+.+++ ..+
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~ 357 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAE 357 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeE
Confidence 000 01234567899999999999999999999999888863 457
Q ss_pred eEEecC-CCCCCCCCch-HHHHHHHHHHHH
Q 022700 232 PLWVKG-GGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 232 ~~~~~~-~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
++++++ .||..+.+.+ ++.+.|.+||++
T Consensus 358 l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 358 VYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 888885 8999866665 688999999964
No 84
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.68 E-value=2.5e-15 Score=113.75 Aligned_cols=185 Identities=17% Similarity=0.099 Sum_probs=135.6
Q ss_pred EEEEEEeCCCCceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEccc-cccCCCC-CC----------CCCchhhhH
Q 022700 56 IVATFWRHPFARFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYS-GYGASTG-KP----------SEFNTYYDI 122 (293)
Q Consensus 56 l~~~~~~~~~~~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~-g~G~s~~-~~----------~~~~~~~d~ 122 (293)
+.+|....+.++..||++.-..+.... .+..+..+ +..||.|+++|+- |--.+.. .. +......++
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~-A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i 106 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKV-ALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDI 106 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHH-hcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHH
Confidence 556666666666788888876665544 45555666 6679999999975 3111211 00 111234789
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCP 202 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 202 (293)
..++++++.+. +..+|+++|++|||-++..+.+..+.+.+++..-|... +...+..+++|
T Consensus 107 ~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~------------------d~~D~~~vk~P 166 (242)
T KOG3043|consen 107 TAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV------------------DSADIANVKAP 166 (242)
T ss_pred HHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccchhheeeeEecCCcC------------------ChhHHhcCCCC
Confidence 99999998665 45899999999999999999888888888887766443 46778888999
Q ss_pred EEEEecCCCCccChhhHHHHHHHhcCCc----ceEEecCCCCCCCC-----Cc-------hHHHHHHHHHHHHhh
Q 022700 203 VLVIHGTNDDIVDLSHGKRLWELSKEKY----DPLWVKGGGHCNLE-----TY-------PEYIKHLRKFINAME 261 (293)
Q Consensus 203 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~~~~H~~~~-----~~-------~~~~~~i~~fl~~~~ 261 (293)
++++.|+.|.++|+.....+.+.++... .+.++++.+|.++. .. ++.+..+.+|+.++.
T Consensus 167 ilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 167 ILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred EEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998988886543 47889999999753 11 135566777777653
No 85
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=3.5e-15 Score=115.34 Aligned_cols=188 Identities=20% Similarity=0.304 Sum_probs=129.8
Q ss_pred CCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc--CCCccEE
Q 022700 64 PFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN--VKQEELI 141 (293)
Q Consensus 64 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--~~~~~i~ 141 (293)
++.++.++++|=.|++...|..+...+-. -+.++++++||+|..-..+ ...|+..+.+.+...+. ....++.
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~--~iel~avqlPGR~~r~~ep----~~~di~~Lad~la~el~~~~~d~P~a 77 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA--DIELLAVQLPGRGDRFGEP----LLTDIESLADELANELLPPLLDAPFA 77 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc--hhheeeecCCCcccccCCc----ccccHHHHHHHHHHHhccccCCCCee
Confidence 35678899999888888888888776622 4779999999999765333 34566666666665554 3346899
Q ss_pred EEEeccChHHHHHHHHhcCC----ccEEEEecchhhhh---hhccchhhhhh----------------------------
Q 022700 142 LYGQSVGSGPTLHLASRLQK----LRGVVLHSAILSGI---RVLYPVKMTLW---------------------------- 186 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p~----v~~~i~~~p~~~~~---~~~~~~~~~~~---------------------------- 186 (293)
++||||||.+|..+|.+..+ +.++++.+...... .........-+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999987642 56666665321100 00000000000
Q ss_pred ------hhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCch-HHHHHHHHHHHH
Q 022700 187 ------FDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 187 ------~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
.+.|.... -..+.||+.++.|++|..++.+....+.+..++..++.+++| ||+++.+.. ++...|.+.+..
T Consensus 158 RAD~~~~e~Y~~~~-~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 158 RADFRALESYRYPP-PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHhcccccCC-CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhh
Confidence 01111111 135789999999999999999999999999998889999986 999876655 577777766653
No 86
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=8.8e-15 Score=134.31 Aligned_cols=216 Identities=14% Similarity=0.105 Sum_probs=156.5
Q ss_pred eeEEEEccCCCEEEEEEEeCCC-----CceEEEEEcCCCCCh----hhHHHHHHHHHhhcCeeEEEEccccccCCCCCC-
Q 022700 44 DCHLLETKNGNKIVATFWRHPF-----ARFTLLYSHGNAADL----GQMLELFIELRAHLRVNIMSYDYSGYGASTGKP- 113 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~----~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~- 113 (293)
+...+.. +|....+....|++ +.|+++.+||+.++. .....+...++...|+.|+.+|.||.|......
T Consensus 499 ~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 499 EFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred eeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHH
Confidence 3333444 88888888887753 469999999988632 111233344568899999999999987665331
Q ss_pred ----C--CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-C-ccEEEEecchhhhhhhccchhhhh
Q 022700 114 ----S--EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-K-LRGVVLHSAILSGIRVLYPVKMTL 185 (293)
Q Consensus 114 ----~--~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~-v~~~i~~~p~~~~~~~~~~~~~~~ 185 (293)
. .....+|...+++++.+..-+|.+++.++|+|+||++++.++...+ + +++.+.++|+++.. .........
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~ter 656 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTER 656 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHh
Confidence 1 1134578888888888888889999999999999999999999998 5 67779999998864 222221111
Q ss_pred h----------hhcccChhhhhcCCCcE-EEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCc--hHH
Q 022700 186 W----------FDIYKNIDKIRHVNCPV-LVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETY--PEY 249 (293)
Q Consensus 186 ~----------~~~~~~~~~l~~i~~P~-l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~--~~~ 249 (293)
+ .........+..++.|. |++||+.|..|+.+++..+.+.+.. ..++.++|+.+|.+.... ..+
T Consensus 657 ymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~ 736 (755)
T KOG2100|consen 657 YMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHL 736 (755)
T ss_pred hcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHH
Confidence 1 11122344556666665 9999999999999999999988854 367888999999986554 468
Q ss_pred HHHHHHHHHHhh
Q 022700 250 IKHLRKFINAME 261 (293)
Q Consensus 250 ~~~i~~fl~~~~ 261 (293)
...+..|+....
T Consensus 737 ~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 737 YEKLDRFLRDCF 748 (755)
T ss_pred HHHHHHHHHHHc
Confidence 889999998443
No 87
>COG0400 Predicted esterase [General function prediction only]
Probab=99.65 E-value=5.4e-15 Score=114.30 Aligned_cols=174 Identities=24% Similarity=0.292 Sum_probs=118.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEcccc--ccCC-------CCCCCCCc---hhhhHHHHHHHHHHH
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSG--YGAS-------TGKPSEFN---TYYDIEAVYNCLKRE 132 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g--~G~s-------~~~~~~~~---~~~d~~~~i~~l~~~ 132 (293)
...|+||++||.|++..++.+.....+-. +.++.+.-+- .|.. .+...... ..+.+.+.++.+.++
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~--~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPN--ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCC--CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 35689999999999988888744444333 3344432110 0100 00111111 113455667777888
Q ss_pred hcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCC
Q 022700 133 YNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTND 211 (293)
Q Consensus 133 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D 211 (293)
++++.++++++|+|.|+.+++.+..++| .++++++++|...... ...-..-..|+++++|+.|
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~----------------~~~~~~~~~pill~hG~~D 157 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP----------------ELLPDLAGTPILLSHGTED 157 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC----------------ccccccCCCeEEEeccCcC
Confidence 8999999999999999999999999999 4999999998765211 0111123579999999999
Q ss_pred CccChhhHHHHHHHhc---CCcceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 212 DIVDLSHGKRLWELSK---EKYDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 212 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
++||...+.++.+.+. ..++...++ .||.. .++..+.+.+|+...
T Consensus 158 pvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i---~~e~~~~~~~wl~~~ 205 (207)
T COG0400 158 PVVPLALAEALAEYLTASGADVEVRWHE-GGHEI---PPEELEAARSWLANT 205 (207)
T ss_pred CccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcC---CHHHHHHHHHHHHhc
Confidence 9999998888877664 345666677 79965 356777788888753
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.64 E-value=1.1e-14 Score=130.99 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=96.2
Q ss_pred EccCCCEEEEEEEeCC--CCceEEEEEcCCCCChh---hHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC--Cchhhh
Q 022700 49 ETKNGNKIVATFWRHP--FARFTLLYSHGNAADLG---QMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE--FNTYYD 121 (293)
Q Consensus 49 ~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~---~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~--~~~~~d 121 (293)
+..||.+|.+.++.|. ++.|+||++||++.+.. .+.......+.+.||.|+++|+||+|.|.+.... ....+|
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D 81 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAAD 81 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchH
Confidence 4678999998888764 35799999999987653 1222222344788999999999999999875432 345689
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh
Q 022700 122 IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS 173 (293)
Q Consensus 122 ~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~ 173 (293)
+.++++|+.++.. ...+|+++|+|+||.+++.+|...| ++++++..++..+
T Consensus 82 ~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 82 GYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 9999999987743 3369999999999999999999876 6999998877544
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.64 E-value=4.1e-15 Score=112.41 Aligned_cols=152 Identities=21% Similarity=0.292 Sum_probs=98.9
Q ss_pred EEEEcCCCCCh-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 70 LLYSHGNAADL-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 70 vv~~hG~~~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
|+++||++++. ..|..++..-+... +.|-.+++. . -+..+++..+.+......++++++|||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-------~-------P~~~~W~~~l~~~i~~~~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-------N-------PDLDEWVQALDQAIDAIDEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-------S---------HHHHHHHHHHCCHC-TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-------C-------CCHHHHHHHHHHHHhhcCCCeEEEEeCHH
Confidence 68999998765 67888887775655 666666551 1 24556666666665534467999999999
Q ss_pred hHHHHHHHH-hcC-CccEEEEecchhhh-hhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHH
Q 022700 149 SGPTLHLAS-RLQ-KLRGVVLHSAILSG-IRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWEL 225 (293)
Q Consensus 149 g~~a~~~a~-~~p-~v~~~i~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 225 (293)
+..++.+++ ... +|+++++++|+... .....+ ....+.... ...+.+|.+++.+++|+++|.+.++.+.+.
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~-----~~~~f~~~p-~~~l~~~~~viaS~nDp~vp~~~a~~~A~~ 139 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPP-----ELDGFTPLP-RDPLPFPSIVIASDNDPYVPFERAQRLAQR 139 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTC-----GGCCCTTSH-CCHHHCCEEEEEETTBSSS-HHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccchhh-----hccccccCc-ccccCCCeEEEEcCCCCccCHHHHHHHHHH
Confidence 999999994 444 59999999998652 111111 111111111 123356779999999999999999999999
Q ss_pred hcCCcceEEecCCCCCCCC
Q 022700 226 SKEKYDPLWVKGGGHCNLE 244 (293)
Q Consensus 226 ~~~~~~~~~~~~~~H~~~~ 244 (293)
++. +++.++++||+...
T Consensus 140 l~a--~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 140 LGA--ELIILGGGGHFNAA 156 (171)
T ss_dssp HT---EEEEETS-TTSSGG
T ss_pred cCC--CeEECCCCCCcccc
Confidence 965 78999999998644
No 90
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.62 E-value=1.9e-14 Score=137.75 Aligned_cols=193 Identities=16% Similarity=0.176 Sum_probs=125.2
Q ss_pred CceEEEEEcCCCCChhhHHHH-----HHHHHhhcCeeEEEEccccccCCCCCCC--CCchhhhHHHHHHHHHHHhcCCCc
Q 022700 66 ARFTLLYSHGNAADLGQMLEL-----FIELRAHLRVNIMSYDYSGYGASTGKPS--EFNTYYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~-----~~~~~~~~g~~v~~~d~~g~G~s~~~~~--~~~~~~d~~~~i~~l~~~~~~~~~ 138 (293)
.+++||++||+..+...|... +..| .+.||.|+++|+ |.++.... .....+++..+++.+.....+..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L-~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGIL-HRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHH-HHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 568999999999988888654 5555 788999999995 44442211 122223333333333211111226
Q ss_pred cEEEEEeccChHHHHHHHHhc-C-CccEEEEecchhhhhh------------h--------------------------c
Q 022700 139 ELILYGQSVGSGPTLHLASRL-Q-KLRGVVLHSAILSGIR------------V--------------------------L 178 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~-p-~v~~~i~~~p~~~~~~------------~--------------------------~ 178 (293)
+++++||||||.+++.+++.+ + ++++++++++..+... . +
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l 221 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQML 221 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhc
Confidence 899999999999999988754 4 5999988654322100 0 0
Q ss_pred cch--hh------------hh---------------h------------hhccc---C----------hhhhhcCCCcEE
Q 022700 179 YPV--KM------------TL---------------W------------FDIYK---N----------IDKIRHVNCPVL 204 (293)
Q Consensus 179 ~~~--~~------------~~---------------~------------~~~~~---~----------~~~l~~i~~P~l 204 (293)
.+. .. .+ | ...+. . ...+.++++|+|
T Consensus 222 ~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 222 DPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred ChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 000 00 00 0 00000 0 013678899999
Q ss_pred EEecCCCCccChhhHHHHHHHhcCCcce-EEecCCCCCCCCC----chHHHHHHHHHHHHhhhc
Q 022700 205 VIHGTNDDIVDLSHGKRLWELSKEKYDP-LWVKGGGHCNLET----YPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 205 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~~----~~~~~~~i~~fl~~~~~~ 263 (293)
+++|++|.+++++.++.+.+.+++. ++ .+++++||..+.- .++++..|.+||.+....
T Consensus 302 ~i~G~~D~ivp~~~~~~l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 302 AFVGEVDDIGQPASVRGIRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 9999999999999999999988765 55 6779999996432 236899999999987653
No 91
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.62 E-value=5.8e-14 Score=107.75 Aligned_cols=208 Identities=19% Similarity=0.236 Sum_probs=123.1
Q ss_pred EEEEccCCCEEEEEEEeCCC----CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc-cCCCCCCCCCch--
Q 022700 46 HLLETKNGNKIVATFWRHPF----ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY-GASTGKPSEFNT-- 118 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~-G~s~~~~~~~~~-- 118 (293)
.-+...+|.+|..+.-.|.. ..++||+..|++.....+..+..++ ...||+|+.+|...| |.|+|...+..+
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL-~~NGFhViRyDsl~HvGlSsG~I~eftms~ 83 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYL-SANGFHVIRYDSLNHVGLSSGDINEFTMSI 83 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHH-HTTT--EEEE---B-------------HHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHH-hhCCeEEEeccccccccCCCCChhhcchHH
Confidence 34667789999988887754 3589999999999999999988888 889999999998765 888877655543
Q ss_pred -hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchh---------------
Q 022700 119 -YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVK--------------- 182 (293)
Q Consensus 119 -~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~--------------- 182 (293)
..++..+++|+. ..+. .++.|+.-|+.|.+|+..+++- ++..+|+.-++.+.-.......
T Consensus 84 g~~sL~~V~dwl~-~~g~--~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 84 GKASLLTVIDWLA-TRGI--RRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHHHHHHHHHH-HTT-----EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred hHHHHHHHHHHHH-hcCC--CcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 378999999998 5555 7899999999999999999854 6888888877665322211110
Q ss_pred ----------hhhhhh----ccc----ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC-CcceEEecCCCCCCC
Q 022700 183 ----------MTLWFD----IYK----NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE-KYDPLWVKGGGHCNL 243 (293)
Q Consensus 183 ----------~~~~~~----~~~----~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~ 243 (293)
..|..+ .|+ ....++.+.+|++.+++.+|.+|......++...+.. ..+++.++|+.|..-
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 011111 122 3456788899999999999999999988888887654 457888899999764
Q ss_pred CCchHHHHHHHHHHHHhhh
Q 022700 244 ETYPEYIKHLRKFINAMEK 262 (293)
Q Consensus 244 ~~~~~~~~~i~~fl~~~~~ 262 (293)
+.. ..+..|.+++.+
T Consensus 240 enl----~vlrnfy~svtk 254 (294)
T PF02273_consen 240 ENL----VVLRNFYQSVTK 254 (294)
T ss_dssp SSH----HHHHHHHHHHHH
T ss_pred hCh----HHHHHHHHHHHH
Confidence 432 334445554443
No 92
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.61 E-value=4.7e-15 Score=122.33 Aligned_cols=196 Identities=14% Similarity=0.160 Sum_probs=112.8
Q ss_pred cCCCCceeEEEEccCCCEEEEEEEeCCC---CceEEEEEcCCCCChhhHH------------------HHHHHHHhhcCe
Q 022700 38 TADKNMDCHLLETKNGNKIVATFWRHPF---ARFTLLYSHGNAADLGQML------------------ELFIELRAHLRV 96 (293)
Q Consensus 38 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~~------------------~~~~~~~~~~g~ 96 (293)
...+..|++.+.+.++..+.+++..|++ +-|.||++||-++..+... .....+ .++||
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~L-Ak~GY 161 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQL-AKRGY 161 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHH-HTTTS
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHH-HhCCC
Confidence 3446788899999999999988776654 5699999999876553311 123344 88999
Q ss_pred eEEEEccccccCCCCCCCCC-------c----------------hhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 97 NIMSYDYSGYGASTGKPSEF-------N----------------TYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 97 ~v~~~d~~g~G~s~~~~~~~-------~----------------~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
.|+++|.+|+|+........ . ...|...+++|+.....+|+++|+++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 99999999999876432110 0 013455688999888888999999999999999999
Q ss_pred HHHHhcCCccEEEEecchhhhh---hhcc-----------chhhhhhhhccc--ChhhhhcC--CCcEEEEecCCCCccC
Q 022700 154 HLASRLQKLRGVVLHSAILSGI---RVLY-----------PVKMTLWFDIYK--NIDKIRHV--NCPVLVIHGTNDDIVD 215 (293)
Q Consensus 154 ~~a~~~p~v~~~i~~~p~~~~~---~~~~-----------~~~~~~~~~~~~--~~~~l~~i--~~P~l~i~g~~D~~~~ 215 (293)
.+++..++|++.+..+-+.... ..+. .-...+....+. +..++..+ ..|+|++.|+.|+.++
T Consensus 242 ~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~ 321 (390)
T PF12715_consen 242 WLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFP 321 (390)
T ss_dssp HHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHH
T ss_pred HHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccH
Confidence 9999999998888766432211 1110 000111112111 23333333 5689999999999875
Q ss_pred hhhHHHHHHHhcCC--cceEEec
Q 022700 216 LSHGKRLWELSKEK--YDPLWVK 236 (293)
Q Consensus 216 ~~~~~~~~~~~~~~--~~~~~~~ 236 (293)
. .+..++..+.. .++..+|
T Consensus 322 i--V~~AY~~~~~p~n~~~~~~p 342 (390)
T PF12715_consen 322 I--VRRAYAIMGAPDNFQIHHYP 342 (390)
T ss_dssp H--HHHHHHHTT-GGGEEE---G
T ss_pred H--HHHHHHhcCCCcceEEeecc
Confidence 4 67777776543 3444444
No 93
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.61 E-value=3e-14 Score=117.06 Aligned_cols=187 Identities=18% Similarity=0.178 Sum_probs=121.7
Q ss_pred CCCEEEEEEEeC--C--CCceEEEEEcCCCCChhhHHHHH---H------HHHhhcCeeEEEEccccccCCCCCCCC--C
Q 022700 52 NGNKIVATFWRH--P--FARFTLLYSHGNAADLGQMLELF---I------ELRAHLRVNIMSYDYSGYGASTGKPSE--F 116 (293)
Q Consensus 52 ~g~~l~~~~~~~--~--~~~~~vv~~hG~~~~~~~~~~~~---~------~~~~~~g~~v~~~d~~g~G~s~~~~~~--~ 116 (293)
||.+|.+..+.| . ++.|+||..|+++.......... . ..+.++||+|+..|.||.|.|.+.... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~ 80 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSP 80 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSH
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCCh
Confidence 788999888876 3 35699999999986531111111 1 114889999999999999999987655 2
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc-CCccEEEEecchhhhhh-hccch------hh-----
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL-QKLRGVVLHSAILSGIR-VLYPV------KM----- 183 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~v~~~i~~~p~~~~~~-~~~~~------~~----- 183 (293)
...+|..++|+|+.++ .....+|+++|.|++|..++.+|+.. |.+++++...+..+... ...+. ..
T Consensus 81 ~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~ 159 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWED 159 (272)
T ss_dssp HHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccchhHHHH
Confidence 3458999999999988 44557999999999999999999954 47999999877544322 10000 00
Q ss_pred --------------------------------------h--hhhh------------cccChhhhhcCCCcEEEEecCCC
Q 022700 184 --------------------------------------T--LWFD------------IYKNIDKIRHVNCPVLVIHGTND 211 (293)
Q Consensus 184 --------------------------------------~--~~~~------------~~~~~~~l~~i~~P~l~i~g~~D 211 (293)
. ++.+ .......+.++++|+|++.|-.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D 239 (272)
T PF02129_consen 160 LQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYD 239 (272)
T ss_dssp HHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTC
T ss_pred HHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCC
Confidence 0 0000 00112346789999999999999
Q ss_pred CccChhhHHHHHHHhcCCc----ceEEecCCCCC
Q 022700 212 DIVDLSHGKRLWELSKEKY----DPLWVKGGGHC 241 (293)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~H~ 241 (293)
.... ..+.+.++.+.... ++++-| .+|.
T Consensus 240 ~~~~-~~~~~~~~~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 240 TLFL-RGALRAYEALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp SSTS-HHHHHHHHHHCTTSTC-EEEEEES-ESTT
T ss_pred cccc-hHHHHHHHHhhcCCCCCCEEEEeC-CCCC
Confidence 6666 77778888887654 333334 4674
No 94
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.61 E-value=2e-13 Score=110.70 Aligned_cols=186 Identities=23% Similarity=0.292 Sum_probs=122.4
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhc-CeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHL-RVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
.|.++++||++++...|......+.... .|.++++|+||||.|. .. ..........+..+.+.++. .++.++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~--~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGL--EKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCC--CceEEEEe
Confidence 5599999999998888877433332221 1899999999999997 11 11222235556666667766 56999999
Q ss_pred ccChHHHHHHHHhcCC-ccEEEEecchhh-----------hhhh-------ccch---------------hhhhh-----
Q 022700 146 SVGSGPTLHLASRLQK-LRGVVLHSAILS-----------GIRV-------LYPV---------------KMTLW----- 186 (293)
Q Consensus 146 S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~-----------~~~~-------~~~~---------------~~~~~----- 186 (293)
|+||.+++.++.++|. +++++++++... .... .... .....
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARA 175 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchh
Confidence 9999999999999995 999999985422 0000 0000 00000
Q ss_pred --hh----------------------------ccc--ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEE
Q 022700 187 --FD----------------------------IYK--NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLW 234 (293)
Q Consensus 187 --~~----------------------------~~~--~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 234 (293)
.. ... .......+.+|+++++|++|.+.+......+.+.++...++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVV 255 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEE
Confidence 00 000 0123445679999999999966666555555556654348888
Q ss_pred ecCCCCCCCCCchH-HHHHHHHHH
Q 022700 235 VKGGGHCNLETYPE-YIKHLRKFI 257 (293)
Q Consensus 235 ~~~~~H~~~~~~~~-~~~~i~~fl 257 (293)
++++||..+.+.++ +.+.+.+|+
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHH
Confidence 99999999877764 666666643
No 95
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.3e-13 Score=118.76 Aligned_cols=214 Identities=16% Similarity=0.155 Sum_probs=149.5
Q ss_pred eeEEEEccCCCEEEEEEEeCCC-----CceEEEEEcCCCCCh---hhHH----HHHHHHHhhcCeeEEEEccccccCCCC
Q 022700 44 DCHLLETKNGNKIVATFWRHPF-----ARFTLLYSHGNAADL---GQML----ELFIELRAHLRVNIMSYDYSGYGASTG 111 (293)
Q Consensus 44 ~~~~~~~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~---~~~~----~~~~~~~~~~g~~v~~~d~~g~G~s~~ 111 (293)
|.+.+.+..|..+++..++|.+ +.|+++++.|+.+-. ..|. -.+..+ +..||.|+++|-||.-...-
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~L-aslGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRL-ASLGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhh-hhcceEEEEEcCCCccccch
Confidence 6677888889999999888642 579999999987632 1221 123444 77999999999999765542
Q ss_pred CCC-------CCchhhhHHHHHHHHHHHhc-CCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchh
Q 022700 112 KPS-------EFNTYYDIEAVYNCLKREYN-VKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVK 182 (293)
Q Consensus 112 ~~~-------~~~~~~d~~~~i~~l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~ 182 (293)
+.. ..-..+|-.+.++++.++.+ +|.++|++-|+|+||++++...+++|+ ++.+|.-+|+.+. +.+....
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W-~~YDTgY 771 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW-RLYDTGY 771 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceee-eeecccc
Confidence 221 12234888899999999986 577899999999999999999999998 5666766776653 2111111
Q ss_pred hhhhhh-------ccc------ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHh---cCCcceEEecCCCCCCCC-C
Q 022700 183 MTLWFD-------IYK------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELS---KEKYDPLWVKGGGHCNLE-T 245 (293)
Q Consensus 183 ~~~~~~-------~~~------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~-~ 245 (293)
...+.+ .|. ..+.+..-....|++||--|.-|...+...+...+ ++..++.+||+.-|..-. +
T Consensus 772 TERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~e 851 (867)
T KOG2281|consen 772 TERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPE 851 (867)
T ss_pred hhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCc
Confidence 111110 011 12333444556999999999999988887777755 445789999999998733 2
Q ss_pred chH-HHHHHHHHHHH
Q 022700 246 YPE-YIKHLRKFINA 259 (293)
Q Consensus 246 ~~~-~~~~i~~fl~~ 259 (293)
..+ +-..+..||++
T Consensus 852 s~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 852 SGIYYEARLLHFLQE 866 (867)
T ss_pred cchhHHHHHHHHHhh
Confidence 233 55678888875
No 96
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.59 E-value=8.2e-14 Score=117.73 Aligned_cols=221 Identities=16% Similarity=0.157 Sum_probs=159.8
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCC-CCceEEEEEcCCCCChhhHH-----HHHHHHHhhcCeeEEEEccccccCCCCC
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHP-FARFTLLYSHGNAADLGQML-----ELFIELRAHLRVNIMSYDYSGYGASTGK 112 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~~~-----~~~~~~~~~~g~~v~~~d~~g~G~s~~~ 112 (293)
...++|+..+.+.||..+....++.. +++|+|++.||+.+++..|. ..++.++++.||.|..-+.||.-.|...
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 45889999999999998877777655 78899999999988887774 3466777999999999999996554321
Q ss_pred ----CC-CC---------chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC----ccEEEEecchhhh
Q 022700 113 ----PS-EF---------NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK----LRGVVLHSAILSG 174 (293)
Q Consensus 113 ----~~-~~---------~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~i~~~p~~~~ 174 (293)
+. .. -...|+.++|+++.+..+. ++++.+|||.|+...+.++...|+ |+..++++|....
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~--~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ--EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc--cceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 11 11 0227899999999998865 899999999999999999998873 9999999986521
Q ss_pred h--------------------hh------ccchhh---------------------------------------------
Q 022700 175 I--------------------RV------LYPVKM--------------------------------------------- 183 (293)
Q Consensus 175 ~--------------------~~------~~~~~~--------------------------------------------- 183 (293)
. .. ..+...
T Consensus 202 k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~ 281 (403)
T KOG2624|consen 202 KHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLA 281 (403)
T ss_pred cccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhc
Confidence 1 00 000000
Q ss_pred -----------hhhhh--------cc---------------cChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCC
Q 022700 184 -----------TLWFD--------IY---------------KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEK 229 (293)
Q Consensus 184 -----------~~~~~--------~~---------------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 229 (293)
..|.+ .| .+...+.++.+|+.+.+|++|.++.++..+.+...+.+.
T Consensus 282 h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~ 361 (403)
T KOG2624|consen 282 HLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNS 361 (403)
T ss_pred cCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccc
Confidence 00000 00 012344567899999999999999999999888888765
Q ss_pred cc--eEEecCCCCCCCC-C---chHHHHHHHHHHHHhh
Q 022700 230 YD--PLWVKGGGHCNLE-T---YPEYIKHLRKFINAME 261 (293)
Q Consensus 230 ~~--~~~~~~~~H~~~~-~---~~~~~~~i~~fl~~~~ 261 (293)
.. .+.+++-.|..+. . .+++.+.|.+.++...
T Consensus 362 ~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 362 VIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 33 2236889998632 2 2357888888887655
No 97
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.59 E-value=1.3e-13 Score=109.22 Aligned_cols=173 Identities=14% Similarity=0.116 Sum_probs=119.6
Q ss_pred CCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc--------C
Q 022700 64 PFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN--------V 135 (293)
Q Consensus 64 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--------~ 135 (293)
.+..|+|||+||+......|..++.++ +..||.|+.+|+...+. .......+++.++++|+.+.+. .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hv-AShGyIVV~~d~~~~~~----~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~ 88 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHV-ASHGYIVVAPDLYSIGG----PDDTDEVASAAEVIDWLAKGLESKLPLGVKP 88 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHH-HhCceEEEEecccccCC----CCcchhHHHHHHHHHHHHhcchhhccccccc
Confidence 457899999999997777777888888 89999999999665322 2333456788888998866332 2
Q ss_pred CCccEEEEEeccChHHHHHHHHhc-----C-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecC
Q 022700 136 KQEELILYGQSVGSGPTLHLASRL-----Q-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGT 209 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~-----p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~ 209 (293)
|-.++.|+|||.||-+|+.++..+ + ++++++++.|+-..... .+.... .+......-+...|++++-.+
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~-~~~~P~----v~~~~p~s~~~~~P~lviGtG 163 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG-SQTEPP----VLTYTPQSFDFSMPALVIGTG 163 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc-cCCCCc----cccCcccccCCCCCeEEEecc
Confidence 456899999999999999998876 2 59999999998631111 111100 111111222346899998766
Q ss_pred CCCc--------cCh--hhHHHHHHHhcCCcceEEecCCCCCCCCCc
Q 022700 210 NDDI--------VDL--SHGKRLWELSKEKYDPLWVKGGGHCNLETY 246 (293)
Q Consensus 210 ~D~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 246 (293)
-+.. |-+ .+-+++++.+....-..+..+.||..+.+.
T Consensus 164 Lg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd 210 (259)
T PF12740_consen 164 LGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDD 210 (259)
T ss_pred cCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcC
Confidence 6632 222 244788888887766777899999975544
No 98
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.58 E-value=1.1e-13 Score=108.23 Aligned_cols=160 Identities=16% Similarity=0.131 Sum_probs=106.9
Q ss_pred CceEEEEEcCCCCChhhHHH--HHHHHHhhcCeeEEEEccccccCCCC--------CCCCCchhhhHHHHHHHHHHHhcC
Q 022700 66 ARFTLLYSHGNAADLGQMLE--LFIELRAHLRVNIMSYDYSGYGASTG--------KPSEFNTYYDIEAVYNCLKREYNV 135 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~--~~~~~~~~~g~~v~~~d~~g~G~s~~--------~~~~~~~~~d~~~~i~~l~~~~~~ 135 (293)
+.|+||++||.+++...+.. -+..++.+.||.|+.++......... ..........+..+++++..++.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 46999999999999877654 45678889999999998542211110 011112345677889999999999
Q ss_pred CCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhh--------ccch---hhhhhhhcccChhhhhcCCCcE
Q 022700 136 KQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRV--------LYPV---KMTLWFDIYKNIDKIRHVNCPV 203 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~--------~~~~---~~~~~~~~~~~~~~l~~i~~P~ 203 (293)
|+++|++.|+|.||.++..++..+|+ +.++...++..-.... +... .............. .-..|+
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~--~~~~P~ 172 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGA--YPGYPR 172 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccC--CCCCCE
Confidence 99999999999999999999999996 7777777654321110 0000 00000000000001 124699
Q ss_pred EEEecCCCCccChhhHHHHHHHhc
Q 022700 204 LVIHGTNDDIVDLSHGKRLWELSK 227 (293)
Q Consensus 204 l~i~g~~D~~~~~~~~~~~~~~~~ 227 (293)
+++||+.|..|.+....++.+...
T Consensus 173 ~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 173 IVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred EEEecCCCCccCcchHHHHHHHHH
Confidence 999999999999988877766553
No 99
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=9.4e-14 Score=105.68 Aligned_cols=209 Identities=15% Similarity=0.163 Sum_probs=137.8
Q ss_pred EEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCc-------h
Q 022700 46 HLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFN-------T 118 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~-------~ 118 (293)
..+...||..+.+..++.+++-+-.+++-|..+....+..-++.++.+.||.|+.+||||.|+|........ -
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 567888999999999988877665666677666666777767777799999999999999999985332211 1
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecc-------------------------hhh
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSA-------------------------ILS 173 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p-------------------------~~~ 173 (293)
..|+.++++++.+.. ...+...+|||+||.+.-.+ .++++..+....+. .+.
T Consensus 88 ~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~-~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt 164 (281)
T COG4757 88 RLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLL-GQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLT 164 (281)
T ss_pred hcchHHHHHHHHhhC--CCCceEEeeccccceeeccc-ccCcccceeeEeccccccccchhhhhcccceeeccccccchh
Confidence 278889999998766 34689999999999765544 34443333332221 111
Q ss_pred hhhhccchh---------------hhhhhh----ccc------ChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC
Q 022700 174 GIRVLYPVK---------------MTLWFD----IYK------NIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 174 ~~~~~~~~~---------------~~~~~~----~~~------~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
.+....+.. ...|.. .++ ..+....+.+|+.++...+|+.+|+.....+.+...+
T Consensus 165 ~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~n 244 (281)
T COG4757 165 FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRN 244 (281)
T ss_pred hccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhc
Confidence 100000000 001110 011 1234467799999999999999999999888887765
Q ss_pred C-cceEEecC----CCCCCCCCch--HHHHHHHHHH
Q 022700 229 K-YDPLWVKG----GGHCNLETYP--EYIKHLRKFI 257 (293)
Q Consensus 229 ~-~~~~~~~~----~~H~~~~~~~--~~~~~i~~fl 257 (293)
. .+...++. .||.-....+ ..++++.+|+
T Consensus 245 Apl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 245 APLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 3 34444433 5898755553 4777777775
No 100
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.55 E-value=1.3e-12 Score=108.21 Aligned_cols=210 Identities=17% Similarity=0.158 Sum_probs=140.4
Q ss_pred eEEEEccCCCEEEEEEEeCC-----CCceEEEEEcCCCCC-----hhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC
Q 022700 45 CHLLETKNGNKIVATFWRHP-----FARFTLLYSHGNAAD-----LGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS 114 (293)
Q Consensus 45 ~~~~~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~-----~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~ 114 (293)
...+.....+.+..+.|.|. ...|+||++||+|.. ...+..++..++.+.+..|+.+|||---+. .
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh----~ 138 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH----P 138 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC----C
Confidence 34555555666777777664 246999999998742 355677888888899999999999933222 2
Q ss_pred CCchhhhHHHHHHHHHHH----hcCCCccEEEEEeccChHHHHHHHHhc-------CCccEEEEecchhhhhhhccc---
Q 022700 115 EFNTYYDIEAVYNCLKRE----YNVKQEELILYGQSVGSGPTLHLASRL-------QKLRGVVLHSAILSGIRVLYP--- 180 (293)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~i~~~p~~~~~~~~~~--- 180 (293)
....++|...++.|+.++ ++.|+++++|+|-|.||.+|..++.+. +++++.|++.|++.+.....+
T Consensus 139 ~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~ 218 (336)
T KOG1515|consen 139 FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQ 218 (336)
T ss_pred CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHH
Confidence 234568888888888774 567889999999999999999887642 369999999998765433222
Q ss_pred ------------hhhhhhhh----cc--------cChh-----hhhcCCC-cEEEEecCCCCccChhhHHHHHHHhcC--
Q 022700 181 ------------VKMTLWFD----IY--------KNID-----KIRHVNC-PVLVIHGTNDDIVDLSHGKRLWELSKE-- 228 (293)
Q Consensus 181 ------------~~~~~~~~----~~--------~~~~-----~l~~i~~-P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 228 (293)
....+|.. .. .+.. ......+ |+|++.++.|.+. +......++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~G 296 (336)
T KOG1515|consen 219 QNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAG 296 (336)
T ss_pred HhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcC
Confidence 11122220 00 0111 1222334 5999999999875 555666666643
Q ss_pred -CcceEEecCCCCCCCCCc------hHHHHHHHHHHHHh
Q 022700 229 -KYDPLWVKGGGHCNLETY------PEYIKHLRKFINAM 260 (293)
Q Consensus 229 -~~~~~~~~~~~H~~~~~~------~~~~~~i~~fl~~~ 260 (293)
..++..++++.|.++... .+..+.+.+|+.+.
T Consensus 297 v~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 297 VEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 345567899999863221 14667788888653
No 101
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.54 E-value=4.3e-14 Score=111.88 Aligned_cols=166 Identities=23% Similarity=0.307 Sum_probs=109.9
Q ss_pred EEEEcCCCCC---hhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHH---hcCCCccEEEE
Q 022700 70 LLYSHGNAAD---LGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKRE---YNVKQEELILY 143 (293)
Q Consensus 70 vv~~hG~~~~---~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~---~~~~~~~i~l~ 143 (293)
||++||++.. .......+..++.+.|+.|+.+|||-.. ........+|+.++++|+.++ +++++++|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p----~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP----EAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT----TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc----cccccccccccccceeeeccccccccccccceEEe
Confidence 7999998743 3445667777867799999999999432 223446779999999999887 55677899999
Q ss_pred EeccChHHHHHHHHhcC-----CccEEEEecchhhhhhh----c------c--chh----hhhhhhc-----------cc
Q 022700 144 GQSVGSGPTLHLASRLQ-----KLRGVVLHSAILSGIRV----L------Y--PVK----MTLWFDI-----------YK 191 (293)
Q Consensus 144 G~S~Gg~~a~~~a~~~p-----~v~~~i~~~p~~~~~~~----~------~--~~~----~~~~~~~-----------~~ 191 (293)
|+|.||.+++.++.... .++++++++|+.+.... . . +.. ...+... ..
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 156 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPLAS 156 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTTTS
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999987532 48999999998654110 0 0 000 0000010 01
Q ss_pred Chhh--hhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCC
Q 022700 192 NIDK--IRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCN 242 (293)
Q Consensus 192 ~~~~--l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~ 242 (293)
+... ++. -.|+++++|+.|.++ +.+..+.+++.. .++++++++.+|.+
T Consensus 157 p~~~~~~~~-~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 157 PLNASDLKG-LPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp GGGSSCCTT-CHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred ccccccccc-CCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 1111 111 348999999999865 566777777743 45788899999975
No 102
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.54 E-value=1.8e-12 Score=108.78 Aligned_cols=201 Identities=20% Similarity=0.204 Sum_probs=132.3
Q ss_pred ccCCCEEEEEEEeC--CC--CceEEEEEcCCCC---ChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhH
Q 022700 50 TKNGNKIVATFWRH--PF--ARFTLLYSHGNAA---DLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDI 122 (293)
Q Consensus 50 ~~~g~~l~~~~~~~--~~--~~~~vv~~hG~~~---~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~ 122 (293)
..++..+.+..+.+ .. +.|+||++||++. +.......+..++...|+.|+.+|||--.+. ......+|+
T Consensus 58 ~~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----~~p~~~~d~ 133 (312)
T COG0657 58 GPSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----PFPAALEDA 133 (312)
T ss_pred CCCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----CCCchHHHH
Confidence 33444455666655 22 4799999999874 3344446778887899999999999943332 233456888
Q ss_pred HHHHHHHHHH---hcCCCccEEEEEeccChHHHHHHHHhcC-----CccEEEEecchhhhhhhccchh------------
Q 022700 123 EAVYNCLKRE---YNVKQEELILYGQSVGSGPTLHLASRLQ-----KLRGVVLHSAILSGIRVLYPVK------------ 182 (293)
Q Consensus 123 ~~~i~~l~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~i~~~p~~~~~~~~~~~~------------ 182 (293)
.+++.|+.++ +++++++|.++|+|.||.+++.++.... .....++++|.++... ..+..
T Consensus 134 ~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~~~~~~ 212 (312)
T COG0657 134 YAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEADLLDAA 212 (312)
T ss_pred HHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCccccCHH
Confidence 8888888766 5678899999999999999999887543 5789999999877543 10000
Q ss_pred -hh-hhhhccc------------C--hhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCC
Q 022700 183 -MT-LWFDIYK------------N--IDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNL 243 (293)
Q Consensus 183 -~~-~~~~~~~------------~--~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~ 243 (293)
.. ++...+. + ...+.. -.|+++++|+.|.+.+ +.+.+.+++.. ..++..+++..|.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~ 289 (312)
T COG0657 213 AILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFD 289 (312)
T ss_pred HHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceecc
Confidence 00 0110000 0 011233 4689999999999877 55666666633 457888999999763
Q ss_pred CCc-hH---HHHHHHHHHH
Q 022700 244 ETY-PE---YIKHLRKFIN 258 (293)
Q Consensus 244 ~~~-~~---~~~~i~~fl~ 258 (293)
... ++ ....+.+|+.
T Consensus 290 ~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 290 LLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ccCcHHHHHHHHHHHHHHH
Confidence 222 33 3344555554
No 103
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.52 E-value=7.4e-14 Score=112.14 Aligned_cols=175 Identities=23% Similarity=0.324 Sum_probs=137.9
Q ss_pred CCCceeEEEEccCCCEEEEEEEeCC-----CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC
Q 022700 40 DKNMDCHLLETKNGNKIVATFWRHP-----FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS 114 (293)
Q Consensus 40 ~~~~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~ 114 (293)
+..=+...+.+.||.+|...+.... +.+..||++-|..+--+. ..+..- .+.||.|+..++||++.|.+.+.
T Consensus 211 ~~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP-~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 211 NKNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTP-AQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred cCCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecCh-HHhCceeeccCCCCccccCCCCC
Confidence 3444567788899999988887543 236788999987654321 122223 56899999999999999999998
Q ss_pred CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhh------
Q 022700 115 EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFD------ 188 (293)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~------ 188 (293)
..+....+..++++.++.++...+.|++.|+|.||.-+..+|..+|+++++|+.+.+-+.+....+....+|..
T Consensus 288 p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~ai 367 (517)
T KOG1553|consen 288 PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAI 367 (517)
T ss_pred cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHH
Confidence 88888899999999999999988999999999999999999999999999999998877655544444444332
Q ss_pred ----cccChhhhhcCCCcEEEEecCCCCccChh
Q 022700 189 ----IYKNIDKIRHVNCPVLVIHGTNDDIVDLS 217 (293)
Q Consensus 189 ----~~~~~~~l~~i~~P~l~i~g~~D~~~~~~ 217 (293)
..+..+.+.+.+.|+.+|--++|.++...
T Consensus 368 Rnh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 368 RNHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred HHhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 23445667788999999999999987655
No 104
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.52 E-value=4.2e-13 Score=105.79 Aligned_cols=161 Identities=17% Similarity=0.271 Sum_probs=107.7
Q ss_pred EccCCCEEEEEEEeCCC-----Cc-eEEEEEcCCCCChhhHHHHHH-------HHHhhcCeeEEEEcccc-ccCCCCCCC
Q 022700 49 ETKNGNKIVATFWRHPF-----AR-FTLLYSHGNAADLGQMLELFI-------ELRAHLRVNIMSYDYSG-YGASTGKPS 114 (293)
Q Consensus 49 ~~~~g~~l~~~~~~~~~-----~~-~~vv~~hG~~~~~~~~~~~~~-------~~~~~~g~~v~~~d~~g-~G~s~~~~~ 114 (293)
...-|.++.+.++.|.+ .. |.|+|+||.+..+.+-...+. ....+.++-|+++.|-- +..++ ...
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e-~~t 245 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE-EKT 245 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccc-ccc
Confidence 34568899999887642 33 999999998876644332211 11123344466665432 11122 111
Q ss_pred CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchhhhhhhhcccCh
Q 022700 115 EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVKMTLWFDIYKNI 193 (293)
Q Consensus 115 ~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~ 193 (293)
......-+..+.+.+.+++++|.++|+++|.|+||..++.++.++|+ +.+.+++++--+. .
T Consensus 246 ~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------------v 307 (387)
T COG4099 246 LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------------V 307 (387)
T ss_pred chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------------------h
Confidence 11122333334447888999999999999999999999999999997 8888888864331 2
Q ss_pred hhhhcC-CCcEEEEecCCCCccChhhHHHHHHHhcC
Q 022700 194 DKIRHV-NCPVLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 194 ~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
..++.+ +.|+.++|+.+|.++|.+.++-++++++.
T Consensus 308 ~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 308 YLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred hhhhhhccCceEEEEecCCCccccCcceeehHHHHh
Confidence 222222 57999999999999999999888777754
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.51 E-value=1.1e-12 Score=121.01 Aligned_cols=175 Identities=16% Similarity=0.169 Sum_probs=122.4
Q ss_pred HHHHHhhcCeeEEEEccccccCCCCCCCC--CchhhhHHHHHHHHHHHh--------------cCCCccEEEEEeccChH
Q 022700 87 FIELRAHLRVNIMSYDYSGYGASTGKPSE--FNTYYDIEAVYNCLKREY--------------NVKQEELILYGQSVGSG 150 (293)
Q Consensus 87 ~~~~~~~~g~~v~~~d~~g~G~s~~~~~~--~~~~~d~~~~i~~l~~~~--------------~~~~~~i~l~G~S~Gg~ 150 (293)
...++..+||+|+..|.||.|.|.|.... ....+|..++|+|+..+. .....+|+++|.|+||.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 33455889999999999999999986543 345588999999998531 11247999999999999
Q ss_pred HHHHHHHhcC-CccEEEEecchhhhhhhccch----------------hh-----------------hhh----------
Q 022700 151 PTLHLASRLQ-KLRGVVLHSAILSGIRVLYPV----------------KM-----------------TLW---------- 186 (293)
Q Consensus 151 ~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~----------------~~-----------------~~~---------- 186 (293)
+++.+|+..| .++++|..+++.+....+... .. ..+
T Consensus 351 ~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 430 (767)
T PRK05371 351 LPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAA 430 (767)
T ss_pred HHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhh
Confidence 9999988765 699999988765432111000 00 000
Q ss_pred h-----------hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCc--hHHH
Q 022700 187 F-----------DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETY--PEYI 250 (293)
Q Consensus 187 ~-----------~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~--~~~~ 250 (293)
. +..+....+.++++|+|+++|..|..+++..+.++++.+.. ..++++ ...+|...... .++.
T Consensus 431 ~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l-~~g~H~~~~~~~~~d~~ 509 (767)
T PRK05371 431 QDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL-HQGGHVYPNNWQSIDFR 509 (767)
T ss_pred hhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE-eCCCccCCCchhHHHHH
Confidence 0 00112345678999999999999999999988888888753 334444 44588654332 3678
Q ss_pred HHHHHHHHHhhh
Q 022700 251 KHLRKFINAMEK 262 (293)
Q Consensus 251 ~~i~~fl~~~~~ 262 (293)
+.+.+|+.....
T Consensus 510 e~~~~Wfd~~Lk 521 (767)
T PRK05371 510 DTMNAWFTHKLL 521 (767)
T ss_pred HHHHHHHHhccc
Confidence 888999987654
No 106
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.50 E-value=2.3e-13 Score=116.58 Aligned_cols=108 Identities=18% Similarity=0.144 Sum_probs=81.3
Q ss_pred CceEEEEEcCCCCCh--hhHHH-HHHHHHhh-cCeeEEEEccccccCCCCCCCCCch---hhhHHHHHHHHHHHhcCCCc
Q 022700 66 ARFTLLYSHGNAADL--GQMLE-LFIELRAH-LRVNIMSYDYSGYGASTGKPSEFNT---YYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~-~~~~~~~~-~g~~v~~~d~~g~G~s~~~~~~~~~---~~d~~~~i~~l~~~~~~~~~ 138 (293)
.+|++|++||++.+. ..|.. +...++.. ..++|+++|++|+|.+.......+. ..++.+.++++.+..+++.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 579999999998653 44654 44445333 3699999999999987643222221 25667778888776676668
Q ss_pred cEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh
Q 022700 139 ELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS 173 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~ 173 (293)
+++|+||||||.+|..++...| +|.++++++|...
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 9999999999999999999888 5999999998644
No 107
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.50 E-value=7.4e-14 Score=114.34 Aligned_cols=108 Identities=16% Similarity=0.128 Sum_probs=81.6
Q ss_pred CCceEEEEEcCCCCCh-hhHHHHH-HHHHhhcCeeEEEEccccccCCCCCCCCC----chhhhHHHHHHHHHHHhcCCCc
Q 022700 65 FARFTLLYSHGNAADL-GQMLELF-IELRAHLRVNIMSYDYSGYGASTGKPSEF----NTYYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~-~~~~~~~-~~~~~~~g~~v~~~d~~g~G~s~~~~~~~----~~~~d~~~~i~~l~~~~~~~~~ 138 (293)
..+|++|++||+.++. ..|...+ ..++...+++|+++|+++++... .+... ...+++..+++++.+..+++.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~-y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPN-YPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccC-hHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 3578999999999887 5665544 44545568999999999873322 11111 1125677788888877666668
Q ss_pred cEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh
Q 022700 139 ELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS 173 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~ 173 (293)
+++++||||||.+|..++...+ +++++++++|...
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999988 5999999998754
No 108
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.50 E-value=2.4e-13 Score=101.52 Aligned_cols=180 Identities=12% Similarity=0.108 Sum_probs=125.1
Q ss_pred EEEeCCCCceEEEEEcCCCCChhh---HHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcC
Q 022700 59 TFWRHPFARFTLLYSHGNAADLGQ---MLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNV 135 (293)
Q Consensus 59 ~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~ 135 (293)
-.|.+....+++||+||+...... ....+. .+.+.||+|..++|- .++..........++..-++|+.+.+.
T Consensus 59 DIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~-~a~~~gY~vasvgY~---l~~q~htL~qt~~~~~~gv~filk~~~- 133 (270)
T KOG4627|consen 59 DIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVG-PAVRRGYRVASVGYN---LCPQVHTLEQTMTQFTHGVNFILKYTE- 133 (270)
T ss_pred EEecCCCCccEEEEEecchhhcCchhcccchhh-hhhhcCeEEEEeccC---cCcccccHHHHHHHHHHHHHHHHHhcc-
Confidence 355667789999999997643333 233333 347889999988764 333222233456778888899988875
Q ss_pred CCccEEEEEeccChHHHHHHHHh--cCCccEEEEecchhhhhhhccchhhh-------hhhhcccChhhhhcCCCcEEEE
Q 022700 136 KQEELILYGQSVGSGPTLHLASR--LQKLRGVVLHSAILSGIRVLYPVKMT-------LWFDIYKNIDKIRHVNCPVLVI 206 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~--~p~v~~~i~~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i~~P~l~i 206 (293)
+.+.+.+.|||.|+.+|+.+..+ .|+|.++++.++..+..+........ -....-.....+..++.|++++
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~~~ilVv 213 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVTVWILVV 213 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCceeeeeEe
Confidence 34678999999999999998886 46799999999987643322111100 0000111244566778999999
Q ss_pred ecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCC
Q 022700 207 HGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLE 244 (293)
Q Consensus 207 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 244 (293)
.|++|.---.++.+.+.+.+... .+..+++.+|+.+.
T Consensus 214 ~~~~espklieQnrdf~~q~~~a-~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 214 AAEHESPKLIEQNRDFADQLRKA-SFTLFKNYDHYDII 250 (270)
T ss_pred eecccCcHHHHhhhhHHHHhhhc-ceeecCCcchhhHH
Confidence 99999866678888888888775 88899999999643
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.49 E-value=2.4e-12 Score=98.40 Aligned_cols=167 Identities=20% Similarity=0.238 Sum_probs=103.4
Q ss_pred EEEEcCCCCChhhHH-HHHHHHHhhcC--eeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 70 LLYSHGNAADLGQML-ELFIELRAHLR--VNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 70 vv~~hG~~~~~~~~~-~~~~~~~~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
|+++||+.++....+ ..+...+.+.+ ..+.++|++ .....+.+.++.+.+... ++.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~--~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELK--PENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCC--CCCeEEEEEC
Confidence 799999998876654 34455546555 345566555 122344444555555542 2569999999
Q ss_pred cChHHHHHHHHhcCCccEEEEecchhhhhhhccchhh----hhhhhccc-------Chhhh----hcCCCcEEEEecCCC
Q 022700 147 VGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKM----TLWFDIYK-------NIDKI----RHVNCPVLVIHGTND 211 (293)
Q Consensus 147 ~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~----~~~~~~~~-------~~~~l----~~i~~P~l~i~g~~D 211 (293)
|||+.|..++.+++ +++ |+++|.+.....+..... .++.+.+. ....+ .....+++++.++.|
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~D 145 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTGD 145 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecCC
Confidence 99999999999886 444 888887764433221111 11111111 11111 122468999999999
Q ss_pred CccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHH
Q 022700 212 DIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFI 257 (293)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl 257 (293)
.+++...+.. ...+. ..++.+|++|.+.. -.+....|.+|+
T Consensus 146 EvLd~~~a~~---~~~~~-~~~i~~ggdH~f~~-f~~~l~~i~~f~ 186 (187)
T PF05728_consen 146 EVLDYREAVA---KYRGC-AQIIEEGGDHSFQD-FEEYLPQIIAFL 186 (187)
T ss_pred cccCHHHHHH---HhcCc-eEEEEeCCCCCCcc-HHHHHHHHHHhh
Confidence 9999865443 34444 45567888998743 356777888876
No 110
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.47 E-value=1.3e-12 Score=113.91 Aligned_cols=183 Identities=14% Similarity=0.139 Sum_probs=123.8
Q ss_pred EEEEEEEeCCC---CceEEEEEcCCCCChhhH-----HHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHH
Q 022700 55 KIVATFWRHPF---ARFTLLYSHGNAADLGQM-----LELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVY 126 (293)
Q Consensus 55 ~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~-----~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i 126 (293)
.+..+.|.+.. .+.+||+++++-.-...+ ..++..+ .+.|+.|+++|+++-+.........+..+.+.+++
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~l-v~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYC-LKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAV 278 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHH-HHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHH
Confidence 34555665532 357889999876333223 3455555 88999999999998666654443334446788888
Q ss_pred HHHHHHhcCCCccEEEEEeccChHHHHH----HHHhcC--CccEEEEecchhhhhhh-----------------------
Q 022700 127 NCLKREYNVKQEELILYGQSVGSGPTLH----LASRLQ--KLRGVVLHSAILSGIRV----------------------- 177 (293)
Q Consensus 127 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~p--~v~~~i~~~p~~~~~~~----------------------- 177 (293)
+.+++..+. +++.++|+|+||.++.. +++..+ +|++++++...++....
T Consensus 279 d~V~~~tG~--~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G 356 (560)
T TIGR01839 279 DAVRAITGS--RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAG 356 (560)
T ss_pred HHHHHhcCC--CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcC
Confidence 888888765 79999999999999997 677766 49999988764442100
Q ss_pred -------------ccch--hhhhhhh---------------------------------ccc--------------Chhh
Q 022700 178 -------------LYPV--KMTLWFD---------------------------------IYK--------------NIDK 195 (293)
Q Consensus 178 -------------~~~~--~~~~~~~---------------------------------~~~--------------~~~~ 195 (293)
+.+. ...++.. .|. ..-+
T Consensus 357 ~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~id 436 (560)
T TIGR01839 357 VLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPID 436 (560)
T ss_pred CcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEec
Confidence 0000 0000000 000 0234
Q ss_pred hhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCC
Q 022700 196 IRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHC 241 (293)
Q Consensus 196 l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 241 (293)
+++|++|++++.|+.|.++|++.+....+.++..++++.. .+||.
T Consensus 437 L~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHI 481 (560)
T TIGR01839 437 LKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHI 481 (560)
T ss_pred hhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCcc
Confidence 5789999999999999999999999999998876454444 56887
No 111
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.46 E-value=8.3e-12 Score=89.65 Aligned_cols=166 Identities=18% Similarity=0.234 Sum_probs=110.6
Q ss_pred eCCCC-ceEEEEEcCCCCChhh--HHHHHHHHHhhcCeeEEEEccccccCC-----CCCCCCCchhhhHHHHHHHHHHHh
Q 022700 62 RHPFA-RFTLLYSHGNAADLGQ--MLELFIELRAHLRVNIMSYDYSGYGAS-----TGKPSEFNTYYDIEAVYNCLKREY 133 (293)
Q Consensus 62 ~~~~~-~~~vv~~hG~~~~~~~--~~~~~~~~~~~~g~~v~~~d~~g~G~s-----~~~~~~~~~~~d~~~~i~~l~~~~ 133 (293)
.+.++ .-+||+.||.+.+.++ +......+ ...|+.|..++++-.-.. .+.+............+..++...
T Consensus 8 ~pag~~~~tilLaHGAGasmdSt~m~~~a~~l-a~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l 86 (213)
T COG3571 8 DPAGPAPVTILLAHGAGASMDSTSMTAVAAAL-ARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL 86 (213)
T ss_pred CCCCCCCEEEEEecCCCCCCCCHHHHHHHHHH-HhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc
Confidence 34444 4588999998876543 34444555 889999999998754322 112222222344555556666554
Q ss_pred cCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCC
Q 022700 134 NVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 134 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~ 212 (293)
...++++-|+||||.++.+.+.... .|.++++++-.+.. +.. .+. -..+.+..+++|+++.+|+.|.
T Consensus 87 --~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp-----pGK----Pe~-~Rt~HL~gl~tPtli~qGtrD~ 154 (213)
T COG3571 87 --AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP-----PGK----PEQ-LRTEHLTGLKTPTLITQGTRDE 154 (213)
T ss_pred --cCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCC-----CCC----ccc-chhhhccCCCCCeEEeeccccc
Confidence 4468999999999999999988765 58999988732211 000 000 1246778889999999999999
Q ss_pred ccChhhHHHHHHHhcCCcceEEecCCCCCC
Q 022700 213 IVDLSHGKRLWELSKEKYDPLWVKGGGHCN 242 (293)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 242 (293)
+-+.+.. ..-.+....+++++++++|..
T Consensus 155 fGtr~~V--a~y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 155 FGTRDEV--AGYALSDPIEVVWLEDADHDL 182 (213)
T ss_pred ccCHHHH--HhhhcCCceEEEEeccCcccc
Confidence 8776654 222445567889999999975
No 112
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=5.5e-12 Score=103.43 Aligned_cols=205 Identities=18% Similarity=0.152 Sum_probs=134.2
Q ss_pred CCEEEEEEEeCC--CCceEEEEEcCCCCChhhHH-------HHHHHH------HhhcCeeEEEEcccccc-CCCCCCC--
Q 022700 53 GNKIVATFWRHP--FARFTLLYSHGNAADLGQML-------ELFIEL------RAHLRVNIMSYDYSGYG-ASTGKPS-- 114 (293)
Q Consensus 53 g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~~-------~~~~~~------~~~~g~~v~~~d~~g~G-~s~~~~~-- 114 (293)
+..|.+..|... ...++|+++|++.++..... -++..+ .....|-|++.|..|.. .|.++.+
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 455666666533 34689999999988542221 133333 13445889999999865 3332221
Q ss_pred ----------CCchhhhHHHHHHHHHHHhcCCCccEE-EEEeccChHHHHHHHHhcC-CccEEEEecchhh---------
Q 022700 115 ----------EFNTYYDIEAVYNCLKREYNVKQEELI-LYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS--------- 173 (293)
Q Consensus 115 ----------~~~~~~d~~~~i~~l~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~--------- 173 (293)
....+.|+..+-..+.+++|+ +++. ++|.||||+.++.++..+| ++..++.++....
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 112446777777889999999 6765 9999999999999999999 4777777764111
Q ss_pred --------------------------hhhhc---------c--chhhhhhh----------------------------h
Q 022700 174 --------------------------GIRVL---------Y--PVKMTLWF----------------------------D 188 (293)
Q Consensus 174 --------------------------~~~~~---------~--~~~~~~~~----------------------------~ 188 (293)
+++.. . .+...+.. .
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 00000 0 00000000 0
Q ss_pred cc---------------cC-------hhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEe-cCCCCCC-CC
Q 022700 189 IY---------------KN-------IDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWV-KGGGHCN-LE 244 (293)
Q Consensus 189 ~~---------------~~-------~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~H~~-~~ 244 (293)
.| +. ...+++++.|++++.-+.|...|++..+.+.+.++....+.++ ...||.- +.
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~ 352 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLV 352 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhc
Confidence 11 11 2336789999999999999999999999999999887446555 4569975 44
Q ss_pred CchHHHHHHHHHHHH
Q 022700 245 TYPEYIKHLRKFINA 259 (293)
Q Consensus 245 ~~~~~~~~i~~fl~~ 259 (293)
+.+.+...|..||+.
T Consensus 353 e~~~~~~~i~~fL~~ 367 (368)
T COG2021 353 ESEAVGPLIRKFLAL 367 (368)
T ss_pred chhhhhHHHHHHhhc
Confidence 444577888888864
No 113
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.46 E-value=4.4e-12 Score=96.40 Aligned_cols=182 Identities=21% Similarity=0.217 Sum_probs=119.9
Q ss_pred CceEEEEEcCCCCChhhHHHH---HHHHHhhcCeeEEEEccccc----c--CCCC-----CCC---------------CC
Q 022700 66 ARFTLLYSHGNAADLGQMLEL---FIELRAHLRVNIMSYDYSGY----G--ASTG-----KPS---------------EF 116 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~---~~~~~~~~g~~v~~~d~~g~----G--~s~~-----~~~---------------~~ 116 (293)
.++-|+++||+-.+...+... +.+.+.+. +..+.+|-|.- + .+.+ .+. ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 467899999999988877654 34443444 66777776631 0 0000 000 00
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh---------cCCccEEEEecchhhhhhhccchhhhhhh
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR---------LQKLRGVVLHSAILSGIRVLYPVKMTLWF 187 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~p~v~~~i~~~p~~~~~~~~~~~~~~~~~ 187 (293)
..+...++.++++.+...-+..==+|+|+|.|+.++..++.. .|.++-+|+++++...-
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~------------ 150 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS------------ 150 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc------------
Confidence 111223444444444332111224899999999999998882 23479999999875421
Q ss_pred hcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHHhhhc
Q 022700 188 DIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 188 ~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~~ 263 (293)
..++.....+.+++|.|.|.|+.|.+++...++.+++.+.+. +++...+||...... .+.+.+.+||......
T Consensus 151 ~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~HpggH~VP~~~-~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 151 KKLDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLEHPGGHIVPNKA-KYKEKIADFIQSFLQE 223 (230)
T ss_pred chhhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEecCCCccCCCch-HHHHHHHHHHHHHHHh
Confidence 122234455678999999999999999999999999999886 445555799876544 6788888888876654
No 114
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.46 E-value=1.4e-12 Score=102.81 Aligned_cols=123 Identities=24% Similarity=0.258 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhc---------cchhh-------
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVL---------YPVKM------- 183 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~---------~~~~~------- 183 (293)
+.++++++|++++..+++++|+|+|.|.||-+|+.+|+.+|+|+++|.++|..-..... .+...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 56788999999998888889999999999999999999999999999998743211100 00000
Q ss_pred ---------hh-hhhc-----ccChhhhhcCCCcEEEEecCCCCccChhh-HHHHHHHhcC-----CcceEEecCCCCCC
Q 022700 184 ---------TL-WFDI-----YKNIDKIRHVNCPVLVIHGTNDDIVDLSH-GKRLWELSKE-----KYDPLWVKGGGHCN 242 (293)
Q Consensus 184 ---------~~-~~~~-----~~~~~~l~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~H~~ 242 (293)
.+ +... -...-.+.++++|+|++.|++|.+.|... ++.+.+++.. ..+++.|+++||.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 00 0000 01122467789999999999999987654 4455555543 34677899999985
No 115
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.46 E-value=2.3e-12 Score=100.19 Aligned_cols=169 Identities=17% Similarity=0.150 Sum_probs=118.3
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc--------CC
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN--------VK 136 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--------~~ 136 (293)
+..|+|+|+||+.-....|..++.++ +.+||.|+++++-.. . .+......+++.++++|+.+.+. .+
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HI-ASHGfIVVAPQl~~~--~--~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHI-ASHGFIVVAPQLYTL--F--PPDGQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHH-hhcCeEEEechhhcc--c--CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 56899999999998888888888888 889999999998742 1 24455667889999999987643 23
Q ss_pred CccEEEEEeccChHHHHHHHHhcC---CccEEEEecchhhhhh--hccchhhhhhhhcccChhhhhcCCCcEEEEecCCC
Q 022700 137 QEELILYGQSVGSGPTLHLASRLQ---KLRGVVLHSAILSGIR--VLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTND 211 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D 211 (293)
..++.++|||.||-.|+.+|..+. .++++|.+.|+..... ...|....+. ..-=.+.+|+++|-..--
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~-------p~SF~l~iPv~VIGtGLg 191 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYV-------PQSFDLDIPVLVIGTGLG 191 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecC-------CcccccCCceEEEecCcC
Confidence 468999999999999999998764 4899999998765321 1111111111 111134689999865433
Q ss_pred -------CccChh--hHHHHHHHhcCCcceEEecCCCCCCCCC
Q 022700 212 -------DIVDLS--HGKRLWELSKEKYDPLWVKGGGHCNLET 245 (293)
Q Consensus 212 -------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 245 (293)
.-|.++ +-+++++.++...-..+..+.||..+.+
T Consensus 192 ~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmDmLD 234 (307)
T PF07224_consen 192 PKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMDMLD 234 (307)
T ss_pred ccccCCCCCCCCCCcCHHHHHHhhcccceeeeecccccccccc
Confidence 112222 3367888887765667778899997544
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.45 E-value=8.3e-13 Score=105.69 Aligned_cols=190 Identities=21% Similarity=0.268 Sum_probs=118.0
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCee----EEEEccccc----cCCC---CCCC-------CC-----chhhhH
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVN----IMSYDYSGY----GAST---GKPS-------EF-----NTYYDI 122 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~----v~~~d~~g~----G~s~---~~~~-------~~-----~~~~d~ 122 (293)
...+.||+||++++...+..++.++-.+.|.. ++.++--|. |.-. ..|. .. ....-+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 45678999999999999999998884255432 333333332 2111 0110 00 112346
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc------CCccEEEEecchhhhhhhccchh---------hhhhh
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL------QKLRGVVLHSAILSGIRVLYPVK---------MTLWF 187 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~i~~~p~~~~~~~~~~~~---------~~~~~ 187 (293)
..++.+|.+++++ +++.++||||||..++.++..+ |++..+|.+++.+++........ .....
T Consensus 90 ~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 90 KKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 7788888989988 8999999999999999998873 46899999998777653322100 00011
Q ss_pred hcccChhhh--hc--CCCcEEEEecC------CCCccChhhHHHHHHHhcCC---cceEEec--CCCCCCCCCchHHHHH
Q 022700 188 DIYKNIDKI--RH--VNCPVLVIHGT------NDDIVDLSHGKRLWELSKEK---YDPLWVK--GGGHCNLETYPEYIKH 252 (293)
Q Consensus 188 ~~~~~~~~l--~~--i~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~H~~~~~~~~~~~~ 252 (293)
..|..+... .. -.+.+|-|.|. .|..||...++.+...+.+. .+...+. ++.|..+.+.+++.+.
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~V~~~ 247 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQVDKL 247 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHHHHHH
Confidence 111111111 12 25679999998 78999999998888877653 3444554 4789988888899999
Q ss_pred HHHHH
Q 022700 253 LRKFI 257 (293)
Q Consensus 253 i~~fl 257 (293)
|.+||
T Consensus 248 I~~FL 252 (255)
T PF06028_consen 248 IIQFL 252 (255)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99998
No 117
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.45 E-value=8.6e-13 Score=86.13 Aligned_cols=75 Identities=23% Similarity=0.350 Sum_probs=62.2
Q ss_pred CCEEEEEEEeCCCC-ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHH
Q 022700 53 GNKIVATFWRHPFA-RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNC 128 (293)
Q Consensus 53 g~~l~~~~~~~~~~-~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~ 128 (293)
|.+|.++.|.|+++ +.+|+++||++.+...|..++..| .+.||.|+++|+||||.|.+.......++++.+.+..
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L-~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~ 76 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFL-AEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQ 76 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHH-HhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHH
Confidence 57899999988876 999999999999999888888888 8899999999999999999766655555555444443
No 118
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.43 E-value=1.3e-11 Score=90.52 Aligned_cols=171 Identities=18% Similarity=0.216 Sum_probs=111.7
Q ss_pred eEEEEEcCCCCCh-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 68 FTLLYSHGNAADL-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 68 ~~vv~~hG~~~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
+.+|.+||++++. ..|...+..-+.. +-.+++. ...... ..++++.+.+.....+++++|++||
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~--------~w~~P~---~~dWi~~l~~~v~a~~~~~vlVAHS 67 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD--------DWEAPV---LDDWIARLEKEVNAAEGPVVLVAHS 67 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC--------CCCCCC---HHHHHHHHHHHHhccCCCeEEEEec
Confidence 5689999988765 5566655543221 2233322 111123 3344444444443344679999999
Q ss_pred cChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHH
Q 022700 147 VGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWEL 225 (293)
Q Consensus 147 ~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 225 (293)
+|+..++.++.... .|+|+++++|+-.... .........|++... ..+.-|.+++.+.+|++++++.++.+.+.
T Consensus 68 LGc~~v~h~~~~~~~~V~GalLVAppd~~~~----~~~~~~~~tf~~~p~-~~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 68 LGCATVAHWAEHIQRQVAGALLVAPPDVSRP----EIRPKHLMTFDPIPR-EPLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred ccHHHHHHHHHhhhhccceEEEecCCCcccc----ccchhhccccCCCcc-ccCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 99999999998776 6999999998754221 111111122222222 23345899999999999999999999999
Q ss_pred hcCCcceEEecCCCCCC----CCCchHHHHHHHHHHHHh
Q 022700 226 SKEKYDPLWVKGGGHCN----LETYPEYIKHLRKFINAM 260 (293)
Q Consensus 226 ~~~~~~~~~~~~~~H~~----~~~~~~~~~~i~~fl~~~ 260 (293)
.+. .++...++||.. +...++....+.+|+.+.
T Consensus 143 wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 143 WGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred ccH--hheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 886 677888899985 444567777777777653
No 119
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.43 E-value=1.3e-12 Score=103.10 Aligned_cols=167 Identities=17% Similarity=0.154 Sum_probs=87.3
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHh---hcCeeEEEEcccccc-----CCCC----------C-C--------CCCch
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRA---HLRVNIMSYDYSGYG-----ASTG----------K-P--------SEFNT 118 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~---~~g~~v~~~d~~g~G-----~s~~----------~-~--------~~~~~ 118 (293)
.++.|+++||++.+...+...+..+.. +.++..+.+|-|--- -... . + .....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 478899999999999998876655532 226778888765321 1000 0 0 00112
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc---------CCccEEEEecchhhhhhhccchhhhhhhhc
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL---------QKLRGVVLHSAILSGIRVLYPVKMTLWFDI 189 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---------p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~ 189 (293)
..++.+.++++.+...-+..-.+|+|+|+||.+|..++... +.++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 34566666666555432212368999999999999888642 348999999987653211
Q ss_pred ccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCC
Q 022700 190 YKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLET 245 (293)
Q Consensus 190 ~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~ 245 (293)
+.....-..+++|+|.++|.+|.+++++.++.+.+.+.+. ..++.-++||.....
T Consensus 151 ~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~gGH~vP~~ 205 (212)
T PF03959_consen 151 YQELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHDGGHHVPRK 205 (212)
T ss_dssp GTTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEESSSSS----
T ss_pred hhhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEECCCCcCcCC
Confidence 1111134567899999999999999999999999988764 333444568977544
No 120
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.43 E-value=9.7e-12 Score=93.31 Aligned_cols=176 Identities=20% Similarity=0.246 Sum_probs=119.3
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
..+||+.|-++....-......+ ++.|+.|+.+|-+-+-.+. .+......|+..++++..++.+. ++++|+|+|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l-~~~G~~VvGvdsl~Yfw~~--rtP~~~a~Dl~~~i~~y~~~w~~--~~vvLiGYSF 77 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEAL-AKQGVPVVGVDSLRYFWSE--RTPEQTAADLARIIRHYRARWGR--KRVVLIGYSF 77 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHH-HHCCCeEEEechHHHHhhh--CCHHHHHHHHHHHHHHHHHHhCC--ceEEEEeecC
Confidence 46888999777764444455555 8999999999987665554 33445678999999999999866 8999999999
Q ss_pred ChHHHHHHHHhcC-----CccEEEEecchhhhhhhccchhhhhhh-----h-cccChhhhhcCC-CcEEEEecCCCCccC
Q 022700 148 GSGPTLHLASRLQ-----KLRGVVLHSAILSGIRVLYPVKMTLWF-----D-IYKNIDKIRHVN-CPVLVIHGTNDDIVD 215 (293)
Q Consensus 148 Gg~~a~~~a~~~p-----~v~~~i~~~p~~~~~~~~~~~~~~~~~-----~-~~~~~~~l~~i~-~P~l~i~g~~D~~~~ 215 (293)
|+-+.-.+..+.| +|+.+++++|.....-. ....-|. + .+.....+.++. .|+++|+|++|.-..
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFe---ihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~ 154 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTTADFE---IHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSL 154 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCcceEE---EEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCc
Confidence 9999998888887 49999999985442111 1111111 1 134556677775 499999998776422
Q ss_pred hhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHH
Q 022700 216 LSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 258 (293)
... + -....+.+.+|| ||.+-.+.+.+.+.|.+-|+
T Consensus 155 cp~---l---~~~~~~~i~lpG-gHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 155 CPS---L---RQPGVEVIALPG-GHHFDGDYDALAKRILDALK 190 (192)
T ss_pred Ccc---c---cCCCcEEEEcCC-CcCCCCCHHHHHHHHHHHHh
Confidence 111 1 123457778887 55454555667777666554
No 121
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=1.1e-11 Score=100.08 Aligned_cols=193 Identities=20% Similarity=0.231 Sum_probs=80.4
Q ss_pred CceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc--CCCccEE
Q 022700 66 ARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN--VKQEELI 141 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~--~~~~~i~ 141 (293)
...+||||.|++... -.|...++..+...||.++-+.++.....-+..+.....+|+.++++|++...+ ...++|+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIV 111 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIV 111 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EE
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEE
Confidence 567999999987644 234444444447789999998765321111123345567899999999998841 1347999
Q ss_pred EEEeccChHHHHHHHHhc------CCccEEEEecchhhhhhhcc------------------------------------
Q 022700 142 LYGQSVGSGPTLHLASRL------QKLRGVVLHSAILSGIRVLY------------------------------------ 179 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~------p~v~~~i~~~p~~~~~~~~~------------------------------------ 179 (293)
|+|||.|+.-+++++... +.|+++|+-+|+.+......
T Consensus 112 LmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~ 191 (303)
T PF08538_consen 112 LMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLV 191 (303)
T ss_dssp EEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTT
T ss_pred EEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeeccccccc
Confidence 999999999999999865 34999999999765321110
Q ss_pred ----chhhhhhhhc---------cc-------ChhhhhcCCCcEEEEecCCCCccChhhH-HHHHHHhcCC-------cc
Q 022700 180 ----PVKMTLWFDI---------YK-------NIDKIRHVNCPVLVIHGTNDDIVDLSHG-KRLWELSKEK-------YD 231 (293)
Q Consensus 180 ----~~~~~~~~~~---------~~-------~~~~l~~i~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~-------~~ 231 (293)
|.....|... |. ....+.++..|+|++.+++|..+|...- +.+.++.... ..
T Consensus 192 ~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~ 271 (303)
T PF08538_consen 192 FYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPL 271 (303)
T ss_dssp T-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------------
T ss_pred cCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccccccccc
Confidence 0011111110 10 0134467788999999999999986432 3444443321 12
Q ss_pred eEEecCCCCCCCCCch-----HHHHHHHHHHH
Q 022700 232 PLWVKGGGHCNLETYP-----EYIKHLRKFIN 258 (293)
Q Consensus 232 ~~~~~~~~H~~~~~~~-----~~~~~i~~fl~ 258 (293)
..++||+.|..-.... .+.+.+..||+
T Consensus 272 S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 272 SGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------
T ss_pred ccccccccccccccccccccccccccccccCC
Confidence 3478999998743322 25566666663
No 122
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.38 E-value=1.4e-11 Score=93.10 Aligned_cols=177 Identities=18% Similarity=0.223 Sum_probs=116.8
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC--------C---------CCCCCchhhhHHHHHHHH
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST--------G---------KPSEFNTYYDIEAVYNCL 129 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~--------~---------~~~~~~~~~d~~~~i~~l 129 (293)
..+||++||.+.+...|.+++..+ .......+++.-|-.--+. + ...+........+.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l-~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQL-PLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcC-CCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 468999999999999998888775 6667777877544221110 0 000111111222223332
Q ss_pred HH---HhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEE
Q 022700 130 KR---EYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLV 205 (293)
Q Consensus 130 ~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~ 205 (293)
.+ ..+++.++|.+.|+|+||.+++..+..++ .+.+++..+++........+.... ..+ ..|++.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~----------~~~--~~~i~~ 149 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLP----------GVN--YTPILL 149 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCcc----------ccC--cchhhe
Confidence 22 34567789999999999999999999997 478888777765522222111100 001 679999
Q ss_pred EecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCchHHHHHHHHHHHH
Q 022700 206 IHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETYPEYIKHLRKFINA 259 (293)
Q Consensus 206 i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 259 (293)
.||+.|++||....+...+.+.. .+++..|++.+|.. .++-.+.+..|+.+
T Consensus 150 ~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~---~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 150 CHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHST---SPQELDDLKSWIKT 203 (206)
T ss_pred ecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccc---cHHHHHHHHHHHHH
Confidence 99999999999887777666533 35777889999954 35667788888876
No 123
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.37 E-value=5.4e-11 Score=97.58 Aligned_cols=187 Identities=17% Similarity=0.128 Sum_probs=123.3
Q ss_pred CceEEEEEcCCCCChhhHHH-H-HHHHHhhcCeeEEEEccccccCCCCCCCCC--------------chhhhHHHHHHHH
Q 022700 66 ARFTLLYSHGNAADLGQMLE-L-FIELRAHLRVNIMSYDYSGYGASTGKPSEF--------------NTYYDIEAVYNCL 129 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~-~-~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~--------------~~~~d~~~~i~~l 129 (293)
.+|+.|.+.|.|++...... + ...+ .+.|++.+.+..|-||...+..... ..+.+...++.|+
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pL-l~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPL-LKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHH-HHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 58999999999887655443 3 4555 5559999999999999875432211 1236677788999
Q ss_pred HHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecch------hhhh-hhccchh---hh--------------
Q 022700 130 KREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAI------LSGI-RVLYPVK---MT-------------- 184 (293)
Q Consensus 130 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~------~~~~-~~~~~~~---~~-------------- 184 (293)
.++ +. .++++.|.||||.+|..+++..|+ +..+-.+++. ..+. .....+. ..
T Consensus 170 ~~~-G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~ 246 (348)
T PF09752_consen 170 ERE-GY--GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIP 246 (348)
T ss_pred Hhc-CC--CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccc
Confidence 888 76 799999999999999999999996 4444344431 1110 0000000 00
Q ss_pred ----------------------hhhhcccChhhhhcC-----CCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecC
Q 022700 185 ----------------------LWFDIYKNIDKIRHV-----NCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKG 237 (293)
Q Consensus 185 ----------------------~~~~~~~~~~~l~~i-----~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
+....++...++.+. .-.++++.+++|..||.+....+.+..++. ++..+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGs-EvR~l~g 325 (348)
T PF09752_consen 247 AQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGS-EVRYLPG 325 (348)
T ss_pred cCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCC-eEEEecC
Confidence 000001111122222 234899999999999999888888888887 8888886
Q ss_pred CCCCC--CCCchHHHHHHHHHHH
Q 022700 238 GGHCN--LETYPEYIKHLRKFIN 258 (293)
Q Consensus 238 ~~H~~--~~~~~~~~~~i~~fl~ 258 (293)
||.. +.....+.+.|.+-++
T Consensus 326 -GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 326 -GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred -CcEEEeeechHHHHHHHHHHhh
Confidence 9985 4444567777776554
No 124
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.35 E-value=1.1e-10 Score=92.65 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=91.4
Q ss_pred CCCEEEEEEEeCCC---CceEEEEEcCCCCChhhHHH--HHHHHHhhcCeeEEEEccc-c------ccCCCCC---CCCC
Q 022700 52 NGNKIVATFWRHPF---ARFTLLYSHGNAADLGQMLE--LFIELRAHLRVNIMSYDYS-G------YGASTGK---PSEF 116 (293)
Q Consensus 52 ~g~~l~~~~~~~~~---~~~~vv~~hG~~~~~~~~~~--~~~~~~~~~g~~v~~~d~~-g------~G~s~~~---~~~~ 116 (293)
+|....++++.|++ +.|.||++||..++...+.. -+.+++...||.|+.+|-- + .+.+.++ ....
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ 122 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGV 122 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCc
Confidence 45666777776653 45899999999998877654 4588889999999999532 1 1222111 1223
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchh
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAIL 172 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~ 172 (293)
+....+.++++.+..++++++.+|++.|.|-||.|+..++..+|+ +.++..+++..
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 455678889999999999999999999999999999999999996 67777766544
No 125
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.35 E-value=2e-11 Score=97.84 Aligned_cols=184 Identities=14% Similarity=0.244 Sum_probs=111.9
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
++|+++|+.+++...|..+...+... .+.|+.++++|.+... +......+-+...++.++.... ..++.|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~--~~~~si~~la~~y~~~I~~~~~--~gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRGDDE--PPPDSIEELASRYAEAIRARQP--EGPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTTS--HEESSHHHHHHHHHHHHHHHTS--SSSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCCC--CCCCCHHHHHHHHHHHhhhhCC--CCCeeehccCc
Confidence 47999999999999999998888444 5779999999987222 2222223334445556655542 24999999999
Q ss_pred ChHHHHHHHHhcC----CccEEEEecchhhhhhh---ccchhh---------------------hhhhhcc----cChhh
Q 022700 148 GSGPTLHLASRLQ----KLRGVVLHSAILSGIRV---LYPVKM---------------------TLWFDIY----KNIDK 195 (293)
Q Consensus 148 Gg~~a~~~a~~~p----~v~~~i~~~p~~~~~~~---~~~~~~---------------------~~~~~~~----~~~~~ 195 (293)
||.+|+.+|.+.. .+..++++++....... ...... ..+.... .....
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQA 155 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHH
Confidence 9999999998753 48899998843221100 000000 0000000 00011
Q ss_pred h-----hcC---CCcEEEEecCCCCccChh---hHHHHHHHhcCCcceEEecCCCCCCCCC--chHHHHHHHHHH
Q 022700 196 I-----RHV---NCPVLVIHGTNDDIVDLS---HGKRLWELSKEKYDPLWVKGGGHCNLET--YPEYIKHLRKFI 257 (293)
Q Consensus 196 l-----~~i---~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~i~~fl 257 (293)
+ ... .+|..+.....|...... ....+.+...+..+.+.++| +|+.+.. .+++.+.|.+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 156 LENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred HhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 1 111 346888888888877665 22235555565556667775 9998665 235666666664
No 126
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.34 E-value=1.5e-10 Score=94.29 Aligned_cols=106 Identities=21% Similarity=0.290 Sum_probs=79.9
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhh--cCeeEEEEccccccCCCCCC-----CCC-chhhhHHHHHHHHHHHhcC---
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAH--LRVNIMSYDYSGYGASTGKP-----SEF-NTYYDIEAVYNCLKREYNV--- 135 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~--~g~~v~~~d~~g~G~s~~~~-----~~~-~~~~d~~~~i~~l~~~~~~--- 135 (293)
+..++|++|++|-.+.|..++..+... ..+.|+++.+.||..++... ... ...+.+..-++++.+...-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 578999999999999999999988655 47999999999997766441 111 2223444444444443321
Q ss_pred CCccEEEEEeccChHHHHHHHHhcC----CccEEEEecchh
Q 022700 136 KQEELILYGQSVGSGPTLHLASRLQ----KLRGVVLHSAIL 172 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~i~~~p~~ 172 (293)
...+++++|||.|+++++.++.+.+ +|.+++++-|.+
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3468999999999999999999988 599999998853
No 127
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.33 E-value=1e-10 Score=94.92 Aligned_cols=168 Identities=23% Similarity=0.325 Sum_probs=118.3
Q ss_pred CceeEEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChhhH------HHHHHHHHhhcCeeEEEEccccccCCCCCC
Q 022700 42 NMDCHLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLGQM------LELFIELRAHLRVNIMSYDYSGYGASTGKP 113 (293)
Q Consensus 42 ~~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~~~------~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~ 113 (293)
.+..+.++. |+..|.+..+..+ .+...|++.-|.++..+.. ...+..++...|.+|+.++|||.|.|.+..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~ 189 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP 189 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC
Confidence 344555666 8888888877633 3578999999988877662 245677778889999999999999999988
Q ss_pred CCCchhhhHHHHHHHHHHHh-cCCCccEEEEEeccChHHHHHHHHhcC-----CccEEEEec-chhhhhhhccchh----
Q 022700 114 SEFNTYYDIEAVYNCLKREY-NVKQEELILYGQSVGSGPTLHLASRLQ-----KLRGVVLHS-AILSGIRVLYPVK---- 182 (293)
Q Consensus 114 ~~~~~~~d~~~~i~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~i~~~-p~~~~~~~~~~~~---- 182 (293)
...+...|..+.++|++++. |+.+++|++.|||+||.++..++.+.. .++-+++-+ ++.+.........
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~ 269 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIG 269 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHHHHHH
Confidence 87778899999999998744 567789999999999999998777653 144334332 2222111111111
Q ss_pred ---hhhhhhcccChhhhhcCCCcEEEEecCC
Q 022700 183 ---MTLWFDIYKNIDKIRHVNCPVLVIHGTN 210 (293)
Q Consensus 183 ---~~~~~~~~~~~~~l~~i~~P~l~i~g~~ 210 (293)
.....-..++.+..+++.||=+++++.+
T Consensus 270 ~~l~~l~gWnidS~K~s~~l~cpeIii~~~d 300 (365)
T PF05677_consen 270 KLLIKLLGWNIDSAKNSEKLQCPEIIIYGVD 300 (365)
T ss_pred HHHHHHhccCCCchhhhccCCCCeEEEeccc
Confidence 0111112345666778899999999874
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.30 E-value=8e-11 Score=100.40 Aligned_cols=159 Identities=16% Similarity=0.167 Sum_probs=87.2
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCC------CC-----C------CC-------C---Cc
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAS------TG-----K------PS-------E---FN 117 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s------~~-----~------~~-------~---~~ 117 (293)
++.|+|||-||++++...+..++..+ +.+||.|+++|+|..-.. +. . .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eL-AS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGEL-ASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHH-HHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHH-HhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 56799999999999999999999999 889999999999853211 00 0 00 0 00
Q ss_pred -----------hhhhHHHHHHHHHHHh--------------------cCCCccEEEEEeccChHHHHHHHHhcCCccEEE
Q 022700 118 -----------TYYDIEAVYNCLKREY--------------------NVKQEELILYGQSVGSGPTLHLASRLQKLRGVV 166 (293)
Q Consensus 118 -----------~~~d~~~~i~~l~~~~--------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i 166 (293)
...++..+++.+.+.. .+|.++|+++|||+||..++.++.+..++++.|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 0134555666554310 123468999999999999999999988999999
Q ss_pred EecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHh--cCCcceEEecCCCCCC
Q 022700 167 LHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELS--KEKYDPLWVKGGGHCN 242 (293)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~ 242 (293)
++.|+...+. .+....++.|+|+|..+. +-.......+.+.. .....++.+.|+.|..
T Consensus 257 ~LD~W~~Pl~----------------~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s 316 (379)
T PF03403_consen 257 LLDPWMFPLG----------------DEIYSKIPQPLLFINSES--FQWWENIFRMKKVISNNKESRMLTIKGTAHLS 316 (379)
T ss_dssp EES---TTS-----------------GGGGGG--S-EEEEEETT--T--HHHHHHHHTT--TTS-EEEEEETT--GGG
T ss_pred EeCCcccCCC----------------cccccCCCCCEEEEECcc--cCChhhHHHHHHHhccCCCcEEEEECCCcCCC
Confidence 9998753211 112256688999998874 22233333332222 2234677789999984
No 129
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=2.2e-11 Score=110.83 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=74.4
Q ss_pred EEEccCCCEEEEEEE--------eCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCC------
Q 022700 47 LLETKNGNKIVATFW--------RHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGK------ 112 (293)
Q Consensus 47 ~~~~~~g~~l~~~~~--------~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~------ 112 (293)
.+...++.++.+... .+.+..|+||++||++++...|..+...+ .+.||.|+++|+||||+|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~L-a~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTL-AAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHH-HhCCcEEEEeCCCCCCccccccccccc
Confidence 444555655544332 12234579999999999999999888888 778999999999999999432
Q ss_pred ---C-CCC------------chh----hhHHHHHHHHH------HHh----cCCCccEEEEEeccChHHHHHHHHh
Q 022700 113 ---P-SEF------------NTY----YDIEAVYNCLK------REY----NVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 113 ---~-~~~------------~~~----~d~~~~i~~l~------~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
. ... +.+ .|+..+...+. ... .++..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0 000 011 33333333332 110 1345699999999999999999875
No 130
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.24 E-value=3e-10 Score=98.13 Aligned_cols=222 Identities=18% Similarity=0.137 Sum_probs=156.6
Q ss_pred cCCCCceeEEEEccCCCEEEEEEEe-C--CCCceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCC-
Q 022700 38 TADKNMDCHLLETKNGNKIVATFWR-H--PFARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTG- 111 (293)
Q Consensus 38 ~~~~~~~~~~~~~~~g~~l~~~~~~-~--~~~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~- 111 (293)
.....++....++.||++|.+.... . .++.|++|+-.|+..-+ -.|......+ .++|...+..+.||-|+-..
T Consensus 389 a~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~W-LerGg~~v~ANIRGGGEfGp~ 467 (648)
T COG1505 389 ADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLW-LERGGVFVLANIRGGGEFGPE 467 (648)
T ss_pred ccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHH-HhcCCeEEEEecccCCccCHH
Confidence 3466778888899999999998874 2 23678888888765433 2344455444 67787788899999887652
Q ss_pred ------CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchhh-
Q 022700 112 ------KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVKM- 183 (293)
Q Consensus 112 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~~- 183 (293)
....++.++|..++.+.|.++--..++++.+.|-|-||.++..+..+.|+ +.++++-.|+++.++...-...
T Consensus 468 WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~ 547 (648)
T COG1505 468 WHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGS 547 (648)
T ss_pred HHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccch
Confidence 22345678999999999988755567899999999999999999999997 7888888898887654321111
Q ss_pred --------------hhhhhcccChhhhhc--CCCcEEEEecCCCCccChhhHHHHHHHhcCC-cceEE--ecCCCCCCCC
Q 022700 184 --------------TLWFDIYKNIDKIRH--VNCPVLVIHGTNDDIVDLSHGKRLWELSKEK-YDPLW--VKGGGHCNLE 244 (293)
Q Consensus 184 --------------~~~~~~~~~~~~l~~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~H~~~~ 244 (293)
..+...|++...++. .=.|+|+-.+.+|+.|.+.++++++.++... ..... -.++||..-.
T Consensus 548 sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~ 627 (648)
T COG1505 548 SWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAA 627 (648)
T ss_pred hhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCC
Confidence 123344555555543 2258999999999999999999999888653 22222 3568998644
Q ss_pred CchH---HHHHHHHHHHHh
Q 022700 245 TYPE---YIKHLRKFINAM 260 (293)
Q Consensus 245 ~~~~---~~~~i~~fl~~~ 260 (293)
...+ ....+..||.+.
T Consensus 628 ~~~~~A~~~a~~~afl~r~ 646 (648)
T COG1505 628 PTAEIARELADLLAFLLRT 646 (648)
T ss_pred ChHHHHHHHHHHHHHHHHh
Confidence 4333 344555666553
No 131
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.23 E-value=9.6e-11 Score=96.44 Aligned_cols=179 Identities=18% Similarity=0.188 Sum_probs=112.7
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc--cCCCCCCCC---------CchhhhHHHHHHHHHHH--
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY--GASTGKPSE---------FNTYYDIEAVYNCLKRE-- 132 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~--G~s~~~~~~---------~~~~~d~~~~i~~l~~~-- 132 (293)
..|+|++-||.+++...+......+ +++||.|..++.+|. |+....... .+...|+..+++++.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~l-As~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHL-ASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHH-hhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4699999999999988888777777 899999999999984 322211111 12347888899998877
Q ss_pred -h----cCCCccEEEEEeccChHHHHHHHHhcCC---------ccEEEEecch-hhhh-----------hhccchhhhhh
Q 022700 133 -Y----NVKQEELILYGQSVGSGPTLHLASRLQK---------LRGVVLHSAI-LSGI-----------RVLYPVKMTLW 186 (293)
Q Consensus 133 -~----~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---------v~~~i~~~p~-~~~~-----------~~~~~~~~~~~ 186 (293)
. .++..+|.++|||+||+.++.++.-..+ ..+.+...+. .+.- ...+.......
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpri 228 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRI 228 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccc
Confidence 2 2456799999999999999998865431 0011111110 0000 00000000000
Q ss_pred hh----------cccChhhhhcCCCcEEEEecCCCCccChhh-HHHHHHHhcCC-cceEEecCCCCCCCCCc
Q 022700 187 FD----------IYKNIDKIRHVNCPVLVIHGTNDDIVDLSH-GKRLWELSKEK-YDPLWVKGGGHCNLETY 246 (293)
Q Consensus 187 ~~----------~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~H~~~~~~ 246 (293)
.. .|. ..-+.++++|++++.|..|...|+.. ...-+..+++. ..+..++++.|+...+.
T Consensus 229 ravvA~~p~~~~~Fg-~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~ 299 (365)
T COG4188 229 RAVVAINPALGMIFG-TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLEL 299 (365)
T ss_pred eeeeeccCCcccccc-cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCcccccccc
Confidence 00 111 34567889999999999999766543 23445556654 35667899999975543
No 132
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.23 E-value=8.5e-10 Score=93.82 Aligned_cols=186 Identities=16% Similarity=0.162 Sum_probs=118.9
Q ss_pred eEEEEEcCCCCChhhHH-HHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 68 FTLLYSHGNAADLGQML-ELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~-~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
|+|+++....+...... ..++.+ .. |+.|+..|+..-+..+... ....++|....+....+..|- +++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~L-l~-g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l~~~i~~~G~---~v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEAL-LP-DHDVYITDWVNARMVPLSA-GKFDLEDYIDYLIEFIRFLGP---DIHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHH-hC-CCcEEEEeCCCCCCCchhc-CCCCHHHHHHHHHHHHHHhCC---CCcEEEEc
Confidence 78999998876665554 455555 56 9999999998544332111 112234433444444455553 49999999
Q ss_pred cChHHHHHHHHhc-----C-CccEEEEecchhhhhhh----------------------------------ccchh----
Q 022700 147 VGSGPTLHLASRL-----Q-KLRGVVLHSAILSGIRV----------------------------------LYPVK---- 182 (293)
Q Consensus 147 ~Gg~~a~~~a~~~-----p-~v~~~i~~~p~~~~~~~----------------------------------~~~~~---- 182 (293)
+||.+++.+++.. | ++++++++++.++.-.. .+|..
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~ 256 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLA 256 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHH
Confidence 9999988777654 4 48999988764442110 00000
Q ss_pred --------------hhhhhhc--------------cc-----------------------------------ChhhhhcC
Q 022700 183 --------------MTLWFDI--------------YK-----------------------------------NIDKIRHV 199 (293)
Q Consensus 183 --------------~~~~~~~--------------~~-----------------------------------~~~~l~~i 199 (293)
..++.+. ++ ..-++++|
T Consensus 257 ~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 257 GFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred HHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 0000000 00 01234678
Q ss_pred C-CcEEEEecCCCCccChhhHHHHHHHh---cC-CcceEEecCCCCCCCCCc----hHHHHHHHHHHHH
Q 022700 200 N-CPVLVIHGTNDDIVDLSHGKRLWELS---KE-KYDPLWVKGGGHCNLETY----PEYIKHLRKFINA 259 (293)
Q Consensus 200 ~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~H~~~~~~----~~~~~~i~~fl~~ 259 (293)
+ +|+|.+.|++|.++++.+++.+.+.+ +. .++....+++||..+... .+++..|.+||.+
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 8 99999999999999999999998875 43 334566778999965433 2578899999875
No 133
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.20 E-value=3e-10 Score=90.13 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=72.9
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHH-------hhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHh---cC
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELR-------AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREY---NV 135 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~-------~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~---~~ 135 (293)
.+.+|||+||.+++...+..+..... ....+.++++|+......-.........+.+.+.++.+.+.+ ..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 46789999999998887766655442 122577899998753211111111123345666677776665 23
Q ss_pred CCccEEEEEeccChHHHHHHHHhcC----CccEEEEecchhhh
Q 022700 136 KQEELILYGQSVGSGPTLHLASRLQ----KLRGVVLHSAILSG 174 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~i~~~p~~~~ 174 (293)
.+++|+++||||||.+|..++...+ .++.+|.++....+
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4579999999999999998887654 38999988765443
No 134
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.18 E-value=1.2e-09 Score=87.53 Aligned_cols=206 Identities=17% Similarity=0.251 Sum_probs=123.9
Q ss_pred EEEccCCCEEEEEEEeCCC-CceEEEEEcCCCCChhh-HHHHH-----HHHHhhcCeeEEEEccccccCCCCCCCC---C
Q 022700 47 LLETKNGNKIVATFWRHPF-ARFTLLYSHGNAADLGQ-MLELF-----IELRAHLRVNIMSYDYSGYGASTGKPSE---F 116 (293)
Q Consensus 47 ~~~~~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~-~~~~~-----~~~~~~~g~~v~~~d~~g~G~s~~~~~~---~ 116 (293)
.+++.-| .+.+...+.++ ++|++|-.|..|-+... |..++ ..+ ...|.++=+|.||+.+....... .
T Consensus 3 ~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i--~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEI--LQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHH--HTTSEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHH--hhceEEEEEeCCCCCCCcccccccccc
Confidence 4555555 56666665543 69999999999988765 55443 223 24688999999999775432222 3
Q ss_pred chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhh-----------------c
Q 022700 117 NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRV-----------------L 178 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~-----------------~ 178 (293)
...+++.+.+..+.+++++ +.++-+|--.|+++-.++|..+| ++.++|+++|....... +
T Consensus 80 Psmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp --HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 4568888888888999988 88999999999999999999999 59999999974321000 0
Q ss_pred cchhhh------------------------------------hhhhcccCh----hhhhcCCCcEEEEecCCCCccChhh
Q 022700 179 YPVKMT------------------------------------LWFDIYKNI----DKIRHVNCPVLVIHGTNDDIVDLSH 218 (293)
Q Consensus 179 ~~~~~~------------------------------------~~~~~~~~~----~~l~~i~~P~l~i~g~~D~~~~~~~ 218 (293)
.+.... .+.+.|... .......||+|++.|+..+. .+.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhh
Confidence 000000 000011111 12234579999999998875 466
Q ss_pred HHHHHHHhcC-CcceEEecCCCCCCCCCch-HHHHHHHHHHHH
Q 022700 219 GKRLWELSKE-KYDPLWVKGGGHCNLETYP-EYIKHLRKFINA 259 (293)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~ 259 (293)
+..+..++.. ..++..++++|=...+++| ...+.+.-||+-
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 6788888854 4567778999888877777 588888888875
No 135
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.15 E-value=1.3e-09 Score=95.18 Aligned_cols=130 Identities=15% Similarity=0.094 Sum_probs=98.7
Q ss_pred ceeEEEEccCCCEEEEEEEeCC--CCceEEEEEc--CCCCCh---hhHHHHHH--HHHhhcCeeEEEEccccccCCCCCC
Q 022700 43 MDCHLLETKNGNKIVATFWRHP--FARFTLLYSH--GNAADL---GQMLELFI--ELRAHLRVNIMSYDYSGYGASTGKP 113 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~--~~~~~vv~~h--G~~~~~---~~~~~~~~--~~~~~~g~~v~~~d~~g~G~s~~~~ 113 (293)
...+.++..||++|....|.|. ++.|+++..+ .+.-.. ........ ..+...||+|+..|.||.|.|.|..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 4457889999999999988877 4678998888 332221 11111222 1347899999999999999999876
Q ss_pred CCCc--hhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhh
Q 022700 114 SEFN--TYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILS 173 (293)
Q Consensus 114 ~~~~--~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~ 173 (293)
.... ..+|..+.|+|+.++.. ...+|..+|.|++|...+.+|+..| .+++++...+..+
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpW-sNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPW-SNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ceeccccccchhHHHHHHHhCCc-cCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 5443 46899999999998654 5579999999999999999998876 6888888776443
No 136
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.13 E-value=1.7e-08 Score=80.14 Aligned_cols=212 Identities=17% Similarity=0.230 Sum_probs=143.0
Q ss_pred ceeEEEEccCCCEEEEEEEeCC-CCceEEEEEcCCCCChhh-HHHH-----HHHHHhhcCeeEEEEccccccCCCCCCCC
Q 022700 43 MDCHLLETKNGNKIVATFWRHP-FARFTLLYSHGNAADLGQ-MLEL-----FIELRAHLRVNIMSYDYSGYGASTGKPSE 115 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~-~~~~~vv~~hG~~~~~~~-~~~~-----~~~~~~~~g~~v~~~d~~g~G~s~~~~~~ 115 (293)
+++..+.+..|. ++...++.+ +++|++|-.|..+-+... |..+ +..+ .++ |.++-+|-||+-........
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei-~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEI-LEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeecccccc-EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHH-Hhh-eEEEecCCCccccCCccCCC
Confidence 667777777764 666666544 468899999999987755 4433 3444 333 88999999998765433322
Q ss_pred ---CchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhh---hhh-ccchh-----
Q 022700 116 ---FNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSG---IRV-LYPVK----- 182 (293)
Q Consensus 116 ---~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~---~~~-~~~~~----- 182 (293)
....+++.+.|..+.+++++ +.++-+|--.|+++-.++|..+| +|-++|++++.... .+. ..++.
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHFGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLY 176 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHH
Confidence 34568899999999999988 89999999999999999999999 59999999863210 000 00000
Q ss_pred --------h------------------------------------hhhhhcccChhhh--------hcCCCcEEEEecCC
Q 022700 183 --------M------------------------------------TLWFDIYKNIDKI--------RHVNCPVLVIHGTN 210 (293)
Q Consensus 183 --------~------------------------------------~~~~~~~~~~~~l--------~~i~~P~l~i~g~~ 210 (293)
. ..+.+.|....++ ..++||+|++.|++
T Consensus 177 ~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 177 YYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 0 0001111111111 14569999999998
Q ss_pred CCccChhhHHHHHHHhcC-CcceEEecCCCCCCCCCch-HHHHHHHHHHHHhh
Q 022700 211 DDIVDLSHGKRLWELSKE-KYDPLWVKGGGHCNLETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 211 D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~-~~~~~i~~fl~~~~ 261 (293)
.+.+ +....+..++.. ...+..+.++|-...+++| ...+.+.-|++-..
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 8754 444555555543 4567778899988887677 57888888887543
No 137
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.11 E-value=7.6e-09 Score=80.34 Aligned_cols=186 Identities=19% Similarity=0.238 Sum_probs=117.6
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcC----eeEEEEccccc----cCCCC---CC-----------CCCchhhhHHHH
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLR----VNIMSYDYSGY----GASTG---KP-----------SEFNTYYDIEAV 125 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g----~~v~~~d~~g~----G~s~~---~~-----------~~~~~~~d~~~~ 125 (293)
-+.||+||.+++...+..++.++..+.. --++.+|--|. |.-+. .| .......-+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3679999999999999988888855442 12455554442 11110 01 001112336667
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc------CCccEEEEecchhh-hhhhcc-c--------------hhh
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLHLASRL------QKLRGVVLHSAILS-GIRVLY-P--------------VKM 183 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~i~~~p~~~-~~~~~~-~--------------~~~ 183 (293)
+.+|.+++++ .++.++||||||.-...++..+ |.++.+|.+++.+. ..-... . ...
T Consensus 126 msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~ 203 (288)
T COG4814 126 MSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYY 203 (288)
T ss_pred HHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHH
Confidence 8889999988 8999999999999999998864 56888888876555 110000 0 000
Q ss_pred hhhhhcccChhhhhcCCCcEEEEecCC------CCccChhhHHHHHHHhcCCc-ce--EEe--cCCCCCCCCCchHHHHH
Q 022700 184 TLWFDIYKNIDKIRHVNCPVLVIHGTN------DDIVDLSHGKRLWELSKEKY-DP--LWV--KGGGHCNLETYPEYIKH 252 (293)
Q Consensus 184 ~~~~~~~~~~~~l~~i~~P~l~i~g~~------D~~~~~~~~~~~~~~~~~~~-~~--~~~--~~~~H~~~~~~~~~~~~ 252 (293)
.++...+ ..-.-.+.+|.|.|+- |-.||...+...+..++++. .. .++ +++.|.-+.+.+.+.+.
T Consensus 204 ~y~~~n~----k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~y 279 (288)
T COG4814 204 DYIAKNY----KKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAKY 279 (288)
T ss_pred HHHHhcc----eeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHHH
Confidence 1111111 0011246799999975 45677777777777776542 22 233 56899988888889999
Q ss_pred HHHHHHH
Q 022700 253 LRKFINA 259 (293)
Q Consensus 253 i~~fl~~ 259 (293)
+..||-+
T Consensus 280 v~~FLw~ 286 (288)
T COG4814 280 VKNFLWE 286 (288)
T ss_pred HHHHhhc
Confidence 9999853
No 138
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.7e-09 Score=94.06 Aligned_cols=222 Identities=15% Similarity=0.089 Sum_probs=145.0
Q ss_pred CCCceeEEEEccCCCEEEEEEEeC-----CCCceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCC-
Q 022700 40 DKNMDCHLLETKNGNKIVATFWRH-----PFARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTG- 111 (293)
Q Consensus 40 ~~~~~~~~~~~~~g~~l~~~~~~~-----~~~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~- 111 (293)
...++.+.+.+.||++|....... .+++|.++..+|..+-. ..|...-..+ .+.|+.....|.||-|+-..
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~l-ld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSL-LDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEE-EecceEEEEEeeccCcccccc
Confidence 457778888999999988654432 24789888888865433 2222222223 45898777889999876542
Q ss_pred ------CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchhhh
Q 022700 112 ------KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVKMT 184 (293)
Q Consensus 112 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~~~ 184 (293)
.....+.++|+.+.+++|.++.-..+++..+.|.|.||.++..++.+.|+ +.++|+-.|+.+.++.+..-...
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilp 596 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILP 596 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccc
Confidence 22345678999999999998866677899999999999999999999997 88889989988876554322222
Q ss_pred hhhh------------------cccChhhhhcC-C-CcEEEEecCCCCccChhhHHHHHHHhcC----------CcceEE
Q 022700 185 LWFD------------------IYKNIDKIRHV-N-CPVLVIHGTNDDIVDLSHGKRLWELSKE----------KYDPLW 234 (293)
Q Consensus 185 ~~~~------------------~~~~~~~l~~i-~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~----------~~~~~~ 234 (293)
.|.. .|.+.+.+..- . ..+|+..+.+|..|.+..+.++.++++. +.-+.+
T Consensus 597 lt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i 676 (712)
T KOG2237|consen 597 LTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRI 676 (712)
T ss_pred cchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEE
Confidence 2221 11122222111 1 2478899999887777666666555421 223445
Q ss_pred ecCCCCCCCCCchH---HHHHHHHHHHHhhh
Q 022700 235 VKGGGHCNLETYPE---YIKHLRKFINAMEK 262 (293)
Q Consensus 235 ~~~~~H~~~~~~~~---~~~~i~~fl~~~~~ 262 (293)
..++||..-....+ -.....+||.+...
T Consensus 677 ~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 677 ETKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred ecCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 68999986332222 23445567766543
No 139
>PRK04940 hypothetical protein; Provisional
Probab=99.10 E-value=3.2e-09 Score=79.68 Aligned_cols=112 Identities=14% Similarity=0.143 Sum_probs=74.3
Q ss_pred ccEEEEEeccChHHHHHHHHhcCCccEEEEecchhhhhhhccchh---hhhhhhccc--ChhhhhcCCC--cEEEEecCC
Q 022700 138 EELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVK---MTLWFDIYK--NIDKIRHVNC--PVLVIHGTN 210 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~---~~~~~~~~~--~~~~l~~i~~--P~l~i~g~~ 210 (293)
+++.|+|.|+||+.|..++.++. + ..|+++|.+.....+.... ..+. .+. ..+.++ ++. ..+++..+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~~~y~--~~~~~h~~eL~-~~~p~r~~vllq~g 134 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRPEEYA--DIATKCVTNFR-EKNRDRCLVILSRN 134 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCCcchh--hhhHHHHHHhh-hcCcccEEEEEeCC
Confidence 47999999999999999999987 3 5677888766543221111 1111 111 112222 233 469999999
Q ss_pred CCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHH
Q 022700 211 DDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 211 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 258 (293)
|.+.+...+.+.+ .+..++.+.+|++|.+.. -+++...|.+|+.
T Consensus 135 DEvLDyr~a~~~y---~~~y~~~v~~GGdH~f~~-fe~~l~~I~~F~~ 178 (180)
T PRK04940 135 DEVLDSQRTAEEL---HPYYEIVWDEEQTHKFKN-ISPHLQRIKAFKT 178 (180)
T ss_pred CcccCHHHHHHHh---ccCceEEEECCCCCCCCC-HHHHHHHHHHHHh
Confidence 9999887766554 343367888999997633 3568889999984
No 140
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.09 E-value=1.1e-08 Score=89.64 Aligned_cols=212 Identities=16% Similarity=0.131 Sum_probs=142.0
Q ss_pred CCCceeEEEEccCCCEEEEEEE-e----CCCCceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCC-
Q 022700 40 DKNMDCHLLETKNGNKIVATFW-R----HPFARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTG- 111 (293)
Q Consensus 40 ~~~~~~~~~~~~~g~~l~~~~~-~----~~~~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~- 111 (293)
.+..+.+..+..||.+|..... . -+++.|++++..|..+.. ..|......| .++|+.....-.||-|+-..
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSL-lDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSL-LDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeee-ecCceEEEEEEeecccccChH
Confidence 3455556667789998886543 2 235678888888855433 2333333444 68898655556788765431
Q ss_pred ------CCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccc----
Q 022700 112 ------KPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYP---- 180 (293)
Q Consensus 112 ------~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~---- 180 (293)
.....+.+.|+.++.++|.++--.+++.++++|-|.||+++..++...|+ ++++|+-.|+++.+..+..
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCC
Confidence 23345788999999999988765667799999999999999999999996 8999999999886554422
Q ss_pred hhhhh--------------hhhcccChhhhhcCC-CcEEEEecCCCCccChhhHHHHHHHhcC----CcceEE-e-cCCC
Q 022700 181 VKMTL--------------WFDIYKNIDKIRHVN-CPVLVIHGTNDDIVDLSHGKRLWELSKE----KYDPLW-V-KGGG 239 (293)
Q Consensus 181 ~~~~~--------------~~~~~~~~~~l~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~-~-~~~~ 239 (293)
+.... +...|++.+.+..-. .++|++.|.+|..|..-...++..++.. ...+.. . -++|
T Consensus 575 LT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aG 654 (682)
T COG1770 575 LTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAG 654 (682)
T ss_pred CCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccccc
Confidence 21111 223445555554433 4689999999999988777767666633 212222 2 5789
Q ss_pred CCCCCCchHHHHH
Q 022700 240 HCNLETYPEYIKH 252 (293)
Q Consensus 240 H~~~~~~~~~~~~ 252 (293)
|.......+.++.
T Consensus 655 HgG~SgRf~~lee 667 (682)
T COG1770 655 HGGASGRFQRLEE 667 (682)
T ss_pred CCCCCCchHHHHH
Confidence 9876555444433
No 141
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.06 E-value=1.2e-09 Score=91.11 Aligned_cols=193 Identities=13% Similarity=0.181 Sum_probs=125.5
Q ss_pred ceEEEEEcCCCCChhhH----HHHHHHHHhhcCeeEEEEccccccCCCCCCCCCch-hhhHHHHHHHHHHHhcCCCccEE
Q 022700 67 RFTLLYSHGNAADLGQM----LELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNT-YYDIEAVYNCLKREYNVKQEELI 141 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~----~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~-~~d~~~~i~~l~~~~~~~~~~i~ 141 (293)
+++++++|.+-.....+ ...+..++.+.|..|+.+++++=..+.+.....+. .+.+...++.+++..+. ++|.
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~--~~In 184 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQ--KDIN 184 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCc--cccc
Confidence 56788888865432221 22344444889999999999865555443333333 37788889999988876 8999
Q ss_pred EEEeccChHHHHHHHHhcC-C-ccEEEEecchhhhhhh------------------------------------ccc--h
Q 022700 142 LYGQSVGSGPTLHLASRLQ-K-LRGVVLHSAILSGIRV------------------------------------LYP--V 181 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p-~-v~~~i~~~p~~~~~~~------------------------------------~~~--~ 181 (293)
++|+|.||.++..+++..+ + |+.+.++....+.... +.+ .
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndl 264 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDL 264 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCcccc
Confidence 9999999999999999887 3 8888877653331110 000 0
Q ss_pred hhhhhhh----------------------------------ccc-------------ChhhhhcCCCcEEEEecCCCCcc
Q 022700 182 KMTLWFD----------------------------------IYK-------------NIDKIRHVNCPVLVIHGTNDDIV 214 (293)
Q Consensus 182 ~~~~~~~----------------------------------~~~-------------~~~~l~~i~~P~l~i~g~~D~~~ 214 (293)
...++.+ .|. ..-.+.+++||++.+.+++|.++
T Consensus 265 iw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~ 344 (445)
T COG3243 265 IWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIA 344 (445)
T ss_pred chHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccC
Confidence 0001110 000 12345788999999999999999
Q ss_pred ChhhHHHHHHHhcCCcceEEecCCCCCC-CCCch-----HHHH----HHHHHHHHhhh
Q 022700 215 DLSHGKRLWELSKEKYDPLWVKGGGHCN-LETYP-----EYIK----HLRKFINAMEK 262 (293)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~~~~-----~~~~----~i~~fl~~~~~ 262 (293)
|..........+++.++ .+.-++||.. ...+| +++. ...+|+.....
T Consensus 345 P~~Sv~~g~~l~~g~~~-f~l~~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a~~ 401 (445)
T COG3243 345 PWSSVYLGARLLGGEVT-FVLSRSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGAKE 401 (445)
T ss_pred CHHHHHHHHHhcCCceE-EEEecCceEEEEeCCcchhhhhcCCCCcchHHHHHHhhcc
Confidence 99998888888888644 4445679984 22211 2333 66777766543
No 142
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.01 E-value=1e-08 Score=81.96 Aligned_cols=158 Identities=15% Similarity=0.136 Sum_probs=103.0
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCC-----C---CC--------------CC-------
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTG-----K---PS--------------EF------- 116 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~-----~---~~--------------~~------- 116 (293)
+.|+|||-||++++..-|......+ +.+||.|.+++.|-+..+.. . .. ..
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~L-AShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSL-ASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhH-hhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 4699999999999998888888888 88999999999987654310 0 00 00
Q ss_pred ---chhhhHHHHHHHHHHHh---------------------cCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchh
Q 022700 117 ---NTYYDIEAVYNCLKREY---------------------NVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAIL 172 (293)
Q Consensus 117 ---~~~~d~~~~i~~l~~~~---------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~ 172 (293)
...+++..++.-+++.. .++..++.++|||+||..+....+.+.+++..|+...+.
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeeee
Confidence 00122333333332211 124467899999999999999888888898888877543
Q ss_pred hhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC--CcceEEecCCCCCC
Q 022700 173 SGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE--KYDPLWVKGGGHCN 242 (293)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~ 242 (293)
- |. .....++.+.|+++|.-+ |.. -.+....+.+.... ...++.+.|+-|-.
T Consensus 276 ~------Pl----------~~~~~~~arqP~~finv~-~fQ-~~en~~vmKki~~~n~g~~~it~~GsVHqn 329 (399)
T KOG3847|consen 276 F------PL----------DQLQYSQARQPTLFINVE-DFQ-WNENLLVMKKIESQNEGNHVITLDGSVHQN 329 (399)
T ss_pred c------cc----------chhhhhhccCCeEEEEcc-ccc-chhHHHHHHhhhCCCccceEEEEccceecc
Confidence 2 11 133456678899999843 322 33444444443332 23667788888874
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.00 E-value=1.5e-08 Score=83.62 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=44.7
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHh---c-CCcceEEecCCCCCCCCCchHHHHHHHHHHHHhhhc
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELS---K-EKYDPLWVKGGGHCNLETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~~ 263 (293)
+.|+++.+|..|.++|+..+..+.+.+ + ..+++..+++.+|..... .-.....+||......
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~--~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAF--ASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhh--cCcHHHHHHHHHHHCC
Confidence 689999999999999999998888765 3 245666778899975221 1224556777766543
No 144
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.99 E-value=2.8e-08 Score=85.83 Aligned_cols=209 Identities=10% Similarity=0.025 Sum_probs=112.1
Q ss_pred eeEEEEcc-CCCEEEEEEEeCC----CCceEEEEEcCCCCCh-hhHHHHHHHHHhhcC---eeEEEEccccccCCCCCCC
Q 022700 44 DCHLLETK-NGNKIVATFWRHP----FARFTLLYSHGNAADL-GQMLELFIELRAHLR---VNIMSYDYSGYGASTGKPS 114 (293)
Q Consensus 44 ~~~~~~~~-~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~-~~~~~~~~~~~~~~g---~~v~~~d~~g~G~s~~~~~ 114 (293)
+.+.+.+. -|....++.|.|+ .+.|+|+++||..... ......+..+.++.. ..++.+|............
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~ 260 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP 260 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC
Confidence 44444433 2444555555554 3469999999954221 122344555533322 3467777532111111111
Q ss_pred CCchh-h-hHHHHHHHHHHHhcC--CCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhccchhhhhhhhc
Q 022700 115 EFNTY-Y-DIEAVYNCLKREYNV--KQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLYPVKMTLWFDI 189 (293)
Q Consensus 115 ~~~~~-~-d~~~~i~~l~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~~~~~~~~~~~ 189 (293)
....+ + -..+++-++.+++.+ ++++.+|+|+||||..|+.++.++|+ +.+++.++|.+...... ......+.+.
T Consensus 261 ~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~-~~~~~~l~~~ 339 (411)
T PRK10439 261 CNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG-GQQEGVLLEQ 339 (411)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc-CCchhHHHHH
Confidence 11112 2 234556677776654 45689999999999999999999995 89999999865311100 0000111111
Q ss_pred ccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 190 YKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 190 ~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
+.. .........+++-+|+.|..+ .+..+.+.+.+.. ..+..+++| ||.. ..+...+.+.|..+
T Consensus 340 l~~-~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~----~~Wr~~L~~~L~~l 406 (411)
T PRK10439 340 LKA-GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDA----LCWRGGLIQGLIDL 406 (411)
T ss_pred HHh-cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCH----HHHHHHHHHHHHHH
Confidence 110 001112346788889888544 4555677776643 345566675 7843 22445555555544
No 145
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.94 E-value=3e-08 Score=81.18 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCEEEEEEEeCCC-----CceEEEEEcCCCCChhhHHHHHHHHHhh--------cCeeEEEEccccccCCCCCCCCCch
Q 022700 52 NGNKIVATFWRHPF-----ARFTLLYSHGNAADLGQMLELFIELRAH--------LRVNIMSYDYSGYGASTGKPSEFNT 118 (293)
Q Consensus 52 ~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~~~--------~g~~v~~~d~~g~G~s~~~~~~~~~ 118 (293)
.|.+++.....++. .-.+++++||++++-..+..++.-+-.. .-|.|+++.+||+|.|++....-..
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn 211 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFN 211 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCcc
Confidence 68888887776652 2357999999999998888877666322 2388999999999999865444444
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEE
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGV 165 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~ 165 (293)
....+.++.-++-++|. ++..+-|..+|+.++..+|..+| +|.|+
T Consensus 212 ~~a~ArvmrkLMlRLg~--nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 212 AAATARVMRKLMLRLGY--NKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred HHHHHHHHHHHHHHhCc--ceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 45666777788888887 89999999999999999999999 45544
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.93 E-value=2.8e-09 Score=89.21 Aligned_cols=108 Identities=15% Similarity=0.151 Sum_probs=69.5
Q ss_pred CceEEEEEcCCCCCh--hhH-HHHHHHHHhh--cCeeEEEEccccccCCCCCCCCC----chhhhHHHHHHHHHHHhcCC
Q 022700 66 ARFTLLYSHGNAADL--GQM-LELFIELRAH--LRVNIMSYDYSGYGASTGKPSEF----NTYYDIEAVYNCLKREYNVK 136 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~-~~~~~~~~~~--~g~~v~~~d~~g~G~s~~~~~~~----~~~~d~~~~i~~l~~~~~~~ 136 (293)
++|++|++||+.++. ..| ......++.. ..++|+++||....... ..... ..-..+...|..|.+..+++
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 689999999998876 344 4455556555 58999999997432211 00000 01145666777887777888
Q ss_pred CccEEEEEeccChHHHHHHHHhcCC---ccEEEEecchhhh
Q 022700 137 QEELILYGQSVGSGPTLHLASRLQK---LRGVVLHSAILSG 174 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~i~~~p~~~~ 174 (293)
.++++|+|||+||.+|-.++..... |..+..+.|....
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 8999999999999999999987664 8999999887654
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.92 E-value=2.5e-08 Score=79.59 Aligned_cols=180 Identities=15% Similarity=0.174 Sum_probs=108.7
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCe--eEEEEccccccCCCCCCCCCc----hhhhHHHHHHHHHHHhcCCCc
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRV--NIMSYDYSGYGASTGKPSEFN----TYYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~--~v~~~d~~g~G~s~~~~~~~~----~~~d~~~~i~~l~~~~~~~~~ 138 (293)
..+.++||+||+..+.+.-...+..+....++ .++.+.||+.|.-.+...... ....+...+..+.+..+. .
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~--~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI--K 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC--c
Confidence 46889999999998876655555555555554 699999998776432222221 224455566666555333 7
Q ss_pred cEEEEEeccChHHHHHHHHhc------C----CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEec
Q 022700 139 ELILYGQSVGSGPTLHLASRL------Q----KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHG 208 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~------p----~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g 208 (293)
+|+|++||||+.+.+.+.... | .+..+++.+|=.+.-. +.. ....+.....++.+.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~---------f~~---~~~~~~~~~~~itvy~s 161 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV---------FRS---QLPDLGSSARRITVYYS 161 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH---------HHH---HHHHHhhcCCCEEEEEc
Confidence 999999999999999987642 1 3788899988655211 000 01134444578999999
Q ss_pred CCCCccChhhHHHHH-HHhcCC-----------cceE-----EecC---CCCCCCCCchHHHHHHHHHHH
Q 022700 209 TNDDIVDLSHGKRLW-ELSKEK-----------YDPL-----WVKG---GGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 209 ~~D~~~~~~~~~~~~-~~~~~~-----------~~~~-----~~~~---~~H~~~~~~~~~~~~i~~fl~ 258 (293)
.+|............ .+++.. ..+. -+++ .+|......+++.+.+.+.|.
T Consensus 162 ~~D~AL~~S~~~~~~~~RlG~~~~~~~~~~~~~~~v~~iD~~~~~~~~~~~H~y~~~~~~v~~d~~~li~ 231 (233)
T PF05990_consen 162 RNDRALKASRRLNGGRPRLGQTGPEDPREPLLAPGVDVIDVSDVDGGDFLGHSYFASSPAVLSDLFQLIG 231 (233)
T ss_pred CCchHHHHHHHHhCCCCCCCCCCcccchhhhhhCCeEEEeCeecCCCCCCCchhhhcCHHHHHHHHHHhc
Confidence 999764332211111 122110 0111 1233 367777777777777766654
No 148
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.91 E-value=1.9e-08 Score=81.76 Aligned_cols=148 Identities=18% Similarity=0.202 Sum_probs=83.9
Q ss_pred CceEEEEEcCCCCChhh--HHHHHHHHHhhcC---eeEEEEccccccCCC--CC--------CCCC---chhh--hHHHH
Q 022700 66 ARFTLLYSHGNAADLGQ--MLELFIELRAHLR---VNIMSYDYSGYGAST--GK--------PSEF---NTYY--DIEAV 125 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~--~~~~~~~~~~~~g---~~v~~~d~~g~G~s~--~~--------~~~~---~~~~--d~~~~ 125 (293)
+.|+|+++||....... ....+..+..+.+ ..+++++..+.+... .. .... ..+. -..++
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 56999999997222211 2233444434322 445666654444111 00 0001 1112 23467
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhcc-chhhhhhh--hcccChh--hhhcC
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLY-PVKMTLWF--DIYKNID--KIRHV 199 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~-~~~~~~~~--~~~~~~~--~l~~i 199 (293)
+.++.+++.+.+++..|+|+||||..|+.++.++|+ +.+++.++|.+....... +.....|. +.+.... .....
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQKKK 182 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHTTS
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcccC
Confidence 788888888765558999999999999999999996 999999998754321110 00000110 0111111 12333
Q ss_pred CCcEEEEecCCCCc
Q 022700 200 NCPVLVIHGTNDDI 213 (293)
Q Consensus 200 ~~P~l~i~g~~D~~ 213 (293)
..++++..|+.|..
T Consensus 183 ~~~i~l~~G~~d~~ 196 (251)
T PF00756_consen 183 PLRIYLDVGTKDEF 196 (251)
T ss_dssp EEEEEEEEETTSTT
T ss_pred CCeEEEEeCCCCcc
Confidence 56789999999984
No 149
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.91 E-value=2e-08 Score=75.91 Aligned_cols=177 Identities=17% Similarity=0.217 Sum_probs=105.5
Q ss_pred ceEEEEEcCCCCChhhHH--HHHHHHHhhcCeeEEEEccccccCCC-CCCCC--------------CchhhhHHHHHHHH
Q 022700 67 RFTLLYSHGNAADLGQML--ELFIELRAHLRVNIMSYDYSGYGAST-GKPSE--------------FNTYYDIEAVYNCL 129 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~--~~~~~~~~~~g~~v~~~d~~g~G~s~-~~~~~--------------~~~~~d~~~~i~~l 129 (293)
-|++.++.|+.+..+.+. ..+...+.++|+.|+.+|-.-.|-.- +.... ..-+..--.+.+|+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 599999999999887764 45667778999999999964433211 00000 00011111222333
Q ss_pred HHH---------hcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccc--hh------hhhhhhccc
Q 022700 130 KRE---------YNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYP--VK------MTLWFDIYK 191 (293)
Q Consensus 130 ~~~---------~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~--~~------~~~~~~~~~ 191 (293)
.++ ..+++.++.|.||||||.-|+..+.+.| +.+++-..+|+.+....... .. ...-.+.|+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yD 203 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYD 203 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcc
Confidence 222 2356778999999999999999998888 58888888887664332211 00 111112344
Q ss_pred Chhhh---hcCCCcEEEEecCCCCccChhh-HHHHHHHhcC----CcceEEecCCCCCCC
Q 022700 192 NIDKI---RHVNCPVLVIHGTNDDIVDLSH-GKRLWELSKE----KYDPLWVKGGGHCNL 243 (293)
Q Consensus 192 ~~~~l---~~i~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~H~~~ 243 (293)
....+ +....-+|+-.|..|.+...+. -+.+.++... ...+...+|-+|...
T Consensus 204 at~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 204 ATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred hHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 33333 3445568999999998866221 1334444432 234455688899753
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.90 E-value=5.4e-08 Score=84.31 Aligned_cols=161 Identities=15% Similarity=0.122 Sum_probs=103.5
Q ss_pred CceEEEEEcCCC--CChhhHHHHHHHHHhhcC--eeEEEEccccccCCCCCCCCCchhhhHHHHHHHHH---HH--hcCC
Q 022700 66 ARFTLLYSHGNA--ADLGQMLELFIELRAHLR--VNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLK---RE--YNVK 136 (293)
Q Consensus 66 ~~~~vv~~hG~~--~~~~~~~~~~~~~~~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~---~~--~~~~ 136 (293)
..|.++++||.+ ....+|...+...+...| ..+.++|++.. .. ..+...-+...+.+.+ .+ -.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--ig----G~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IG----GANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CC----CcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 368999999977 222333333333334334 33566666521 00 0222222222222222 11 1134
Q ss_pred CccEEEEEeccChHHHHHHHHhcCC--ccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCcc
Q 022700 137 QEELILYGQSVGSGPTLHLASRLQK--LRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIV 214 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~ 214 (293)
..+|+|+|.|||+.++.+....+.+ |+++|+++-.++..+.... ...+.+-.++.|+||+.|.+|.++
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprg----------irDE~Lldmk~PVLFV~Gsnd~mc 318 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRG----------IRDEALLDMKQPVLFVIGSNDHMC 318 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccC----------CcchhhHhcCCceEEEecCCcccC
Confidence 4789999999998888877766553 8888888754443222110 113455567889999999999999
Q ss_pred ChhhHHHHHHHhcCCcceEEecCCCCCC
Q 022700 215 DLSHGKRLWELSKEKYDPLWVKGGGHCN 242 (293)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 242 (293)
+++..+.+.+++....+++++.+++|.+
T Consensus 319 spn~ME~vreKMqA~~elhVI~~adhsm 346 (784)
T KOG3253|consen 319 SPNSMEEVREKMQAEVELHVIGGADHSM 346 (784)
T ss_pred CHHHHHHHHHHhhccceEEEecCCCccc
Confidence 9999999999999988999999999986
No 151
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.88 E-value=6e-07 Score=69.81 Aligned_cols=190 Identities=14% Similarity=0.115 Sum_probs=119.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcC--eeEEEEccccccCCCCC------CC---CCchhhhHHHHHHHHHHHh
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLR--VNIMSYDYSGYGASTGK------PS---EFNTYYDIEAVYNCLKREY 133 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~g~G~s~~~------~~---~~~~~~d~~~~i~~l~~~~ 133 (293)
..++.++++.|.++....|.++...+....+ ..++.+-..||-.-+.. .. .....+.+..-++++.+..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 4689999999999999888888888866655 45777777776543310 01 1112245666677777665
Q ss_pred cCCCccEEEEEeccChHHHHHHHHhc-C--CccEEEEecchhhhhhhc---------------------------cchhh
Q 022700 134 NVKQEELILYGQSVGSGPTLHLASRL-Q--KLRGVVLHSAILSGIRVL---------------------------YPVKM 183 (293)
Q Consensus 134 ~~~~~~i~l~G~S~Gg~~a~~~a~~~-p--~v~~~i~~~p~~~~~~~~---------------------------~~~~~ 183 (293)
. ...+++++|||-|+++.+.+.... + ++..++++-|....+... .|...
T Consensus 107 P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 107 P-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred C-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 4 446999999999999999988743 3 477777776633211000 00000
Q ss_pred hhhhh------------------------cc----------------cChhhhhcCCCcEEEEecCCCCccChhhHHHHH
Q 022700 184 TLWFD------------------------IY----------------KNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLW 223 (293)
Q Consensus 184 ~~~~~------------------------~~----------------~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~ 223 (293)
.++.. .+ ...+.+.+..+-+.+.+|++|.+||.+....+.
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~k 265 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYK 265 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHh
Confidence 00000 00 012233445678999999999999998888888
Q ss_pred HHhcCC-cceEEecCCCCCCCCCch-HHHHHHHHH
Q 022700 224 ELSKEK-YDPLWVKGGGHCNLETYP-EYIKHLRKF 256 (293)
Q Consensus 224 ~~~~~~-~~~~~~~~~~H~~~~~~~-~~~~~i~~f 256 (293)
+.++.. .++- .++..|.+..... .....+.+.
T Consensus 266 dd~~eed~~Ld-edki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 266 DDVPEEDLKLD-EDKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred hhcchhceeec-cccCCcceeecccHHHHHHHHHh
Confidence 888764 2222 3788998754443 344455443
No 152
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.80 E-value=4.1e-07 Score=76.26 Aligned_cols=106 Identities=23% Similarity=0.281 Sum_probs=71.4
Q ss_pred CceEEEEEcCCCCChhhHHH------HHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCcc
Q 022700 66 ARFTLLYSHGNAADLGQMLE------LFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEE 139 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~------~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~ 139 (293)
+.|+||++||+|-....... .+.+++. ...++++||.-...............++.+..+++.+..+. ++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~--~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN--KN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC--Ce
Confidence 46999999998754322211 2223323 45799999875431111111223557788888888866554 79
Q ss_pred EEEEEeccChHHHHHHHHhcC------CccEEEEecchhhhh
Q 022700 140 LILYGQSVGSGPTLHLASRLQ------KLRGVVLHSAILSGI 175 (293)
Q Consensus 140 i~l~G~S~Gg~~a~~~a~~~p------~v~~~i~~~p~~~~~ 175 (293)
|+|+|-|.||.+++.++.... ..+++|+++|++...
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999998776432 278999999988754
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.79 E-value=2.2e-06 Score=71.45 Aligned_cols=199 Identities=13% Similarity=0.130 Sum_probs=119.7
Q ss_pred EEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChh--hHHHHHHHHHhhcCeeEEEEcccc--ccCCC---------
Q 022700 46 HLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLG--QMLELFIELRAHLRVNIMSYDYSG--YGAST--------- 110 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~--~~~~~~~~~~~~~g~~v~~~d~~g--~G~s~--------- 110 (293)
+.+.. ++..+-..+.+.. +.+..||++||.+.+.. .....+..-+.+.|++++.+..|. .....
T Consensus 65 ~~L~~-~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~ 143 (310)
T PF12048_consen 65 QWLQA-GEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEV 143 (310)
T ss_pred EEeec-CCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCC
Confidence 44444 4555555555443 34679999999987753 333444555589999999998886 11000
Q ss_pred ---C--CCCCC--------------------chhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC--Ccc
Q 022700 111 ---G--KPSEF--------------------NTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ--KLR 163 (293)
Q Consensus 111 ---~--~~~~~--------------------~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~v~ 163 (293)
+ ..... .....+.+.+.++.++. ..+++|+||+.|+.++..+.+..+ .+.
T Consensus 144 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~d 220 (310)
T PF12048_consen 144 PSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPPMPD 220 (310)
T ss_pred CCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCcccC
Confidence 0 00000 01123444555554432 256999999999999999999987 489
Q ss_pred EEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHH---HHHhc-CCcceEEecCCC
Q 022700 164 GVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRL---WELSK-EKYDPLWVKGGG 239 (293)
Q Consensus 164 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~ 239 (293)
++|++++....... ...-.+.+.++++|+|=|++..... .......- ..+.. ..++...+.+..
T Consensus 221 aLV~I~a~~p~~~~-----------n~~l~~~la~l~iPvLDi~~~~~~~-~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~ 288 (310)
T PF12048_consen 221 ALVLINAYWPQPDR-----------NPALAEQLAQLKIPVLDIYSADNPA-SQQTAKQRKQAAKRNKKPDYRQIQLPGLP 288 (310)
T ss_pred eEEEEeCCCCcchh-----------hhhHHHHhhccCCCEEEEecCCChH-HHHHHHHHHHHHHhccCCCceeEecCCCC
Confidence 99999987542111 0112456678899999999887332 22222211 11111 234556667766
Q ss_pred CCCCCCchHHHHHHHHHHHHh
Q 022700 240 HCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 240 H~~~~~~~~~~~~i~~fl~~~ 260 (293)
|........+.+.|..||.++
T Consensus 289 ~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 289 DNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred CChhhHHHHHHHHHHHHHHhh
Confidence 654333334889999999864
No 154
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.77 E-value=1.5e-07 Score=93.86 Aligned_cols=186 Identities=12% Similarity=0.015 Sum_probs=110.6
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
+.++.++++||++++...|..+...+ . .++.|+.++.+|++.... .....+++.+.+........ ...++.++|
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l-~-~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~-~~~p~~l~G 1139 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYL-D-PQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQ-PHGPYHLLG 1139 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhc-C-CCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhC-CCCCEEEEE
Confidence 34578999999999998888888776 2 357899999999986531 12334444433333333332 225899999
Q ss_pred eccChHHHHHHHHhc---C-CccEEEEecchhhhhh----h----ccc-----hh---hh---------------hhhhc
Q 022700 145 QSVGSGPTLHLASRL---Q-KLRGVVLHSAILSGIR----V----LYP-----VK---MT---------------LWFDI 189 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~---p-~v~~~i~~~p~~~~~~----~----~~~-----~~---~~---------------~~~~~ 189 (293)
|||||.+|..+|.+. + ++..++++++...... . ..+ .. .. .+...
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1219 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGN 1219 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHH
Confidence 999999999999864 3 4888888775322100 0 000 00 00 00000
Q ss_pred ccCh------hhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHH
Q 022700 190 YKNI------DKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINA 259 (293)
Q Consensus 190 ~~~~------~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 259 (293)
+... .....+.+|++++.+..|..........+.+.. +..+...++ ++|..+...+ ....+.+++.+
T Consensus 1220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~~~~-~~~~~~~~l~~ 1292 (1296)
T PRK10252 1220 YADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDIISPE-AFEKIGPILRA 1292 (1296)
T ss_pred HHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECC-CCHHHHCCcH-HHHHHHHHHHH
Confidence 0000 012345689999999888765555444454444 444666664 6898766444 34555555554
No 155
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.75 E-value=7.5e-09 Score=85.98 Aligned_cols=194 Identities=20% Similarity=0.259 Sum_probs=109.2
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHh-cCCCccEEEEEe
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREY-NVKQEELILYGQ 145 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~-~~~~~~i~l~G~ 145 (293)
...++..||...+...............++.++..|+++++.+.+.........+...+..++.... ..+..++.++|.
T Consensus 88 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 167 (299)
T COG1073 88 GESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGE 167 (299)
T ss_pred cccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceee
Confidence 3445556665444333333332332444555666666666666544433333333333333333221 012256788888
Q ss_pred ccChHHHHHHHHhc----C-CccEEEEecchhhh-hhhc---cchhhhhhhhcccChhhhhcCC-CcEEEEecCCCCccC
Q 022700 146 SVGSGPTLHLASRL----Q-KLRGVVLHSAILSG-IRVL---YPVKMTLWFDIYKNIDKIRHVN-CPVLVIHGTNDDIVD 215 (293)
Q Consensus 146 S~Gg~~a~~~a~~~----p-~v~~~i~~~p~~~~-~~~~---~~~~~~~~~~~~~~~~~l~~i~-~P~l~i~g~~D~~~~ 215 (293)
|+||..++...... + .+..++..++.... .... ............+....+..+. +|+|+++|.+|..+|
T Consensus 168 s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp 247 (299)
T COG1073 168 SLGGALALLLLGANPELARELIDYLITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVP 247 (299)
T ss_pred ccCceeeccccccchHHHHhhhhhhccCCCCCCCCcccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccc
Confidence 88887777755431 1 13334433333332 0000 0000011122334455556665 799999999999999
Q ss_pred hhhHHHHHHHhcC-CcceEEecCCCCCCCC-Cch---HHHHHHHHHHHHh
Q 022700 216 LSHGKRLWELSKE-KYDPLWVKGGGHCNLE-TYP---EYIKHLRKFINAM 260 (293)
Q Consensus 216 ~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~-~~~---~~~~~i~~fl~~~ 260 (293)
...+..+++.... ..+...+++++|.... ..+ +....+.+|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 248 LRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 9999999998887 6677888999999764 333 5778888888764
No 156
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.62 E-value=1.4e-07 Score=81.77 Aligned_cols=93 Identities=10% Similarity=0.100 Sum_probs=71.2
Q ss_pred CChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC-CchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHH
Q 022700 78 ADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE-FNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLA 156 (293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a 156 (293)
.....|..++..| .+.||. ...|++|+|.+.+.... ....+++.+.++.+.+..+. .+++|+||||||.++..++
T Consensus 105 ~~~~~~~~li~~L-~~~GY~-~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~--~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 105 DEVYYFHDMIEQL-IKWGYK-EGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG--KKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred chHHHHHHHHHHH-HHcCCc-cCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECHhHHHHHHHH
Confidence 3456778888888 789984 48899999987654322 23457788888887777654 7999999999999999999
Q ss_pred HhcCC-----ccEEEEecchhhh
Q 022700 157 SRLQK-----LRGVVLHSAILSG 174 (293)
Q Consensus 157 ~~~p~-----v~~~i~~~p~~~~ 174 (293)
..+|+ |+.+|++++...+
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHCCHhHHhHhccEEEECCCCCC
Confidence 88773 8999998875543
No 157
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.59 E-value=3.7e-06 Score=72.41 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=45.7
Q ss_pred hhcCeeEEEEccccccCCCCCCCCCchhhhHHHHH----HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEE
Q 022700 92 AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVY----NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVV 166 (293)
Q Consensus 92 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i----~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i 166 (293)
...|+.|+.+.+. ..+.....++|+..+. +.+.+... +..+..|+|.|.||..++.+|+.+|+ +.-+|
T Consensus 97 L~~GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp-~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplv 169 (581)
T PF11339_consen 97 LRAGHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHP-DAPKPNLIGNCQGGWAAMMLAALRPDLVGPLV 169 (581)
T ss_pred HHcCCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCC-CCCCceEEeccHHHHHHHHHHhcCcCccCcee
Confidence 4558888888765 1233334555554433 33333322 22389999999999999999999997 45555
Q ss_pred Eec
Q 022700 167 LHS 169 (293)
Q Consensus 167 ~~~ 169 (293)
+.+
T Consensus 170 laG 172 (581)
T PF11339_consen 170 LAG 172 (581)
T ss_pred ecC
Confidence 544
No 158
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.58 E-value=9.3e-07 Score=74.44 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=99.4
Q ss_pred HHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEec-chhhhhhhccchh-------------------------
Q 022700 129 LKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHS-AILSGIRVLYPVK------------------------- 182 (293)
Q Consensus 129 l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~-p~~~~~~~~~~~~------------------------- 182 (293)
+.+..+++.+++++.|.|==|..++..|+..+||++++-+. ++++....+....
T Consensus 163 ~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~t 242 (367)
T PF10142_consen 163 LKKKFGVNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDT 242 (367)
T ss_pred HHhhcCCCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCC
Confidence 33334556689999999999999999999888888887553 2222111110000
Q ss_pred --hhhhhhcccChhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHHh
Q 022700 183 --MTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINAM 260 (293)
Q Consensus 183 --~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~ 260 (293)
.....+..++.....++++|.++|.|..|++..++.+..+++.+++.+.+..+|+++|.... .+..+.+..|+...
T Consensus 243 p~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 243 PEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFYNRI 320 (367)
T ss_pred HHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHHHHH
Confidence 01112344566777888999999999999999999999999999998888999999998765 66888899999887
Q ss_pred hhc
Q 022700 261 EKL 263 (293)
Q Consensus 261 ~~~ 263 (293)
...
T Consensus 321 ~~~ 323 (367)
T PF10142_consen 321 QNG 323 (367)
T ss_pred HcC
Confidence 543
No 159
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.58 E-value=4.8e-08 Score=76.55 Aligned_cols=88 Identities=11% Similarity=0.082 Sum_probs=53.5
Q ss_pred eEEEEEcCCCC-ChhhHHHHHHHHHhhcCee---EEEEccccccCCCCCC---CCCchhhhHHHHHHHHHHHhcCCCccE
Q 022700 68 FTLLYSHGNAA-DLGQMLELFIELRAHLRVN---IMSYDYSGYGASTGKP---SEFNTYYDIEAVYNCLKREYNVKQEEL 140 (293)
Q Consensus 68 ~~vv~~hG~~~-~~~~~~~~~~~~~~~~g~~---v~~~d~~g~G~s~~~~---~~~~~~~d~~~~i~~l~~~~~~~~~~i 140 (293)
.+|||+||.++ ....|..+...| .+.||. +++++|-......... .......++.+.++.+++..+ .+|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l-~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TG---akV 77 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYL-KAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTG---AKV 77 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHH-HHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-----E
T ss_pred CCEEEECCCCcchhhCHHHHHHHH-HHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhC---CEE
Confidence 46999999998 446777777777 889999 7999884322211000 011223567777777777764 399
Q ss_pred EEEEeccChHHHHHHHHhc
Q 022700 141 ILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 141 ~l~G~S~Gg~~a~~~a~~~ 159 (293)
-|+||||||.++..+....
T Consensus 78 DIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 78 DIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEEEETCHHHHHHHHHHHC
T ss_pred EEEEcCCcCHHHHHHHHHc
Confidence 9999999999999887643
No 160
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.57 E-value=2.5e-05 Score=65.95 Aligned_cols=216 Identities=18% Similarity=0.146 Sum_probs=124.1
Q ss_pred EEEEccCCCEEEEEEEeCC--CCceEEEEEcCCCCChh-hHH-HHHHHHHhhcCeeEEEEccccccCCCCCCC-------
Q 022700 46 HLLETKNGNKIVATFWRHP--FARFTLLYSHGNAADLG-QML-ELFIELRAHLRVNIMSYDYSGYGASTGKPS------- 114 (293)
Q Consensus 46 ~~~~~~~g~~l~~~~~~~~--~~~~~vv~~hG~~~~~~-~~~-~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~------- 114 (293)
+.+......++.++..-.+ ..+..|+++.|+|++.. .+. .....++.+.+.+|+.++|-+.+.......
T Consensus 12 vELgikR~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~ 91 (403)
T PF11144_consen 12 VELGIKRESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDI 91 (403)
T ss_pred eeecccccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHH
Confidence 4445555667776664332 24678888999998875 333 445566677888889999988775421000
Q ss_pred -----------------CCch--------------------------------------------------hhhHHHHHH
Q 022700 115 -----------------EFNT--------------------------------------------------YYDIEAVYN 127 (293)
Q Consensus 115 -----------------~~~~--------------------------------------------------~~d~~~~i~ 127 (293)
.... .-|...++.
T Consensus 92 D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~ 171 (403)
T PF11144_consen 92 DKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALL 171 (403)
T ss_pred HHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHH
Confidence 0000 022333344
Q ss_pred HHHHHhcCCCc--cEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhcc-------------------------
Q 022700 128 CLKREYNVKQE--ELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVLY------------------------- 179 (293)
Q Consensus 128 ~l~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~~------------------------- 179 (293)
++.+.+.-... +++++|+|.||++|..+|...|. +.+++=.+++......+.
T Consensus 172 ~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~~~~~~i~ 251 (403)
T PF11144_consen 172 DLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFNFKNIRIY 251 (403)
T ss_pred HHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccccccCCEEEE
Confidence 44444332233 89999999999999999999995 777777665432211110
Q ss_pred chhhhhhhh------ccc----------Chhhhh---c--CCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEe
Q 022700 180 PVKMTLWFD------IYK----------NIDKIR---H--VNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWV 235 (293)
Q Consensus 180 ~~~~~~~~~------~~~----------~~~~l~---~--i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~ 235 (293)
-....+|.. .|. +.+.+. + -++-.+..|+..|..+|.+.-+.+++.+.. .+++..+
T Consensus 252 ~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 252 CFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred EEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 000111111 111 112221 1 234567889999999999998888886643 3455554
Q ss_pred -----------cCCCCCCCCCch-HHHHHHHHHHHHhh
Q 022700 236 -----------KGGGHCNLETYP-EYIKHLRKFINAME 261 (293)
Q Consensus 236 -----------~~~~H~~~~~~~-~~~~~i~~fl~~~~ 261 (293)
.+-.|..-.... -+.+.+-..|++..
T Consensus 332 kdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~ 369 (403)
T PF11144_consen 332 KDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQ 369 (403)
T ss_pred cChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhh
Confidence 455666422222 35556666666543
No 161
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.55 E-value=5.5e-07 Score=72.21 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=73.5
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
|+|+++|+.++....|..+...+-.. ..|+.++.+|.+... ......-+-+...++.+++.- +..++.|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~Q--P~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL--LPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQ--PEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC--ceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhC--CCCCEEEEeecc
Confidence 57999999999999999888888433 569999999987532 222222233444555555543 347999999999
Q ss_pred ChHHHHHHHHhcC----CccEEEEecchhh
Q 022700 148 GSGPTLHLASRLQ----KLRGVVLHSAILS 173 (293)
Q Consensus 148 Gg~~a~~~a~~~p----~v~~~i~~~p~~~ 173 (293)
||.+|..+|.+.. .+..++++.+...
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999998764 3888888876554
No 162
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.53 E-value=3.9e-07 Score=81.54 Aligned_cols=105 Identities=12% Similarity=0.141 Sum_probs=70.1
Q ss_pred CCceEEEEEcCCCCCh---hhHHHHHHHHHhhcC-eeEEEEccc-c---ccCCCCC-CCCCchhhhHHHHHHHHHHH---
Q 022700 65 FARFTLLYSHGNAADL---GQMLELFIELRAHLR-VNIMSYDYS-G---YGASTGK-PSEFNTYYDIEAVYNCLKRE--- 132 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~---~~~~~~~~~~~~~~g-~~v~~~d~~-g---~G~s~~~-~~~~~~~~d~~~~i~~l~~~--- 132 (293)
++.|+||++||++... ..+ ....++...+ +.|+.++|| | +...... .....-..|...+++|+++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 3469999999965322 221 2234434444 999999999 3 2222211 11223457888888888765
Q ss_pred hcCCCccEEEEEeccChHHHHHHHHhcC---CccEEEEecch
Q 022700 133 YNVKQEELILYGQSVGSGPTLHLASRLQ---KLRGVVLHSAI 171 (293)
Q Consensus 133 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~ 171 (293)
++.|+++|.|+|+|.||.++..++.... .++++|+.++.
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 4678999999999999999988777632 37788877753
No 163
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.48 E-value=2.4e-06 Score=71.09 Aligned_cols=176 Identities=16% Similarity=0.191 Sum_probs=106.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
++...-||+.|-|+...--++....+ .+.|+.|+-+|-.-+-.+. .+......|+..++++...+.+. .++.|+|
T Consensus 258 ~sd~~av~~SGDGGWr~lDk~v~~~l-~~~gvpVvGvdsLRYfW~~--rtPe~~a~Dl~r~i~~y~~~w~~--~~~~liG 332 (456)
T COG3946 258 NSDTVAVFYSGDGGWRDLDKEVAEAL-QKQGVPVVGVDSLRYFWSE--RTPEQIAADLSRLIRFYARRWGA--KRVLLIG 332 (456)
T ss_pred CcceEEEEEecCCchhhhhHHHHHHH-HHCCCceeeeehhhhhhcc--CCHHHHHHHHHHHHHHHHHhhCc--ceEEEEe
Confidence 35677888888877766656666666 8999999999976555554 23345668999999999998876 8999999
Q ss_pred eccChHHHHHHHHhcC-C----ccEEEEecchhhhhhhccchhhhhhhhc-----ccChhhhhcCC-CcEEEEecCCCC-
Q 022700 145 QSVGSGPTLHLASRLQ-K----LRGVVLHSAILSGIRVLYPVKMTLWFDI-----YKNIDKIRHVN-CPVLVIHGTNDD- 212 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p-~----v~~~i~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~-~P~l~i~g~~D~- 212 (293)
+|+|+-+.-.+-.+.| . ++-+.+++= - -..-+.....-|... .+....+.++. ..+.+|+|.+|+
T Consensus 333 ySfGADvlP~~~n~L~~~~r~~v~~~~ll~l-~--~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~~e~d 409 (456)
T COG3946 333 YSFGADVLPFAYNRLPPATRQRVRMVSLLGL-G--RTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIYGQEEKD 409 (456)
T ss_pred ecccchhhHHHHHhCCHHHHHHHHHHHHHhc-c--ccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEecCcccc
Confidence 9999998877777665 1 222222210 0 000111111112111 12334555553 468889997654
Q ss_pred -ccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHH
Q 022700 213 -IVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFI 257 (293)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl 257 (293)
.||-... ...+.+.+||+.|+. .+.....+.|++=+
T Consensus 410 ~~Cp~l~~--------~~~~~v~lpGgHHFd-~dy~~la~~il~~~ 446 (456)
T COG3946 410 TACPSLKA--------KGVDTVKLPGGHHFD-GDYEKLAKAILQGM 446 (456)
T ss_pred ccCCcchh--------hcceeEecCCCcccC-ccHHHHHHHHHHHH
Confidence 4443321 123678889855543 33344555554433
No 164
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.43 E-value=1.6e-05 Score=60.99 Aligned_cols=107 Identities=10% Similarity=0.167 Sum_probs=70.8
Q ss_pred CceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEE
Q 022700 66 ARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILY 143 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 143 (293)
.+-.|||+.|++..- -.+...+...+.+.+|..+-+.++.+-.--+..+.....+|+..+++++... +. ...|+|+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~-~f-St~vVL~ 112 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLC-GF-STDVVLV 112 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhcc-Cc-ccceEEE
Confidence 356788998887654 2334444444488999999887764321112223344567777777766432 22 2489999
Q ss_pred EeccChHHHHHHHHhc--CC-ccEEEEecchhhh
Q 022700 144 GQSVGSGPTLHLASRL--QK-LRGVVLHSAILSG 174 (293)
Q Consensus 144 G~S~Gg~~a~~~a~~~--p~-v~~~i~~~p~~~~ 174 (293)
|||.|+.-.+.+..+. ++ +.+.|+.+|+.+.
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 9999999999888443 33 8888888987663
No 165
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.41 E-value=2.7e-06 Score=66.79 Aligned_cols=200 Identities=13% Similarity=0.112 Sum_probs=115.1
Q ss_pred EEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchh---hhHH----HHHHHHHHH
Q 022700 60 FWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTY---YDIE----AVYNCLKRE 132 (293)
Q Consensus 60 ~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~---~d~~----~~i~~l~~~ 132 (293)
++-|.+..++-+++-|-+++...-...+..-..+.++..+++.-|-+|+..+........ .|+- +.|+.....
T Consensus 106 ~liPQK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~l 185 (371)
T KOG1551|consen 106 WLIPQKMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKL 185 (371)
T ss_pred eecccCcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 444455566666666655544322223333336778889999999999876332211111 2211 122222222
Q ss_pred ------hcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecch------hhhh-hhccchh----------------
Q 022700 133 ------YNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAI------LSGI-RVLYPVK---------------- 182 (293)
Q Consensus 133 ------~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~------~~~~-~~~~~~~---------------- 182 (293)
.++ .++.++|-||||.+|..+...+++ |..+=+.++- ..++ ...+...
T Consensus 186 f~Ws~~~g~--g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~ 263 (371)
T KOG1551|consen 186 FTWSSADGL--GNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRN 263 (371)
T ss_pred cccccccCc--ccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhC
Confidence 233 689999999999999999997764 3333233221 0000 0000000
Q ss_pred --------------------hhhhhhcccChhhhhcCCCc-----EEEEecCCCCccChhhHHHHHHHhcCCcceEEecC
Q 022700 183 --------------------MTLWFDIYKNIDKIRHVNCP-----VLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKG 237 (293)
Q Consensus 183 --------------------~~~~~~~~~~~~~l~~i~~P-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
..+.....+....+....+| ++++.+++|..++......+.+..+++ ++...+
T Consensus 264 p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~-eVr~~e- 341 (371)
T KOG1551|consen 264 PAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGC-EVRYLE- 341 (371)
T ss_pred chhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCC-EEEEee-
Confidence 00000011112223333333 678889999999998888888888886 777777
Q ss_pred CCCCC--CCCchHHHHHHHHHHHHhhhc
Q 022700 238 GGHCN--LETYPEYIKHLRKFINAMEKL 263 (293)
Q Consensus 238 ~~H~~--~~~~~~~~~~i~~fl~~~~~~ 263 (293)
+||.. +..++.+...|.+-|++..+.
T Consensus 342 gGHVsayl~k~dlfRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 342 GGHVSAYLFKQDLFRRAIVDGLDRLDKE 369 (371)
T ss_pred cCceeeeehhchHHHHHHHHHHHhhhhc
Confidence 69985 555667999999999887653
No 166
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.39 E-value=1.3e-05 Score=64.61 Aligned_cols=185 Identities=12% Similarity=0.102 Sum_probs=104.6
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccCh
Q 022700 70 LLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGS 149 (293)
Q Consensus 70 vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg 149 (293)
+|++=|+.+...........+..+.|+.++.+-.+........ ......+..+++.+.+...-+..++.+-.+|.||
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG 78 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNGG 78 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECch
Confidence 5566666655444333333333669999998876532211111 1122333344454444332111389999999988
Q ss_pred HHHHHHHHh-----------cCCccEEEEecchhhh--------hhhccchh--------hhhhh------------hcc
Q 022700 150 GPTLHLASR-----------LQKLRGVVLHSAILSG--------IRVLYPVK--------MTLWF------------DIY 190 (293)
Q Consensus 150 ~~a~~~a~~-----------~p~v~~~i~~~p~~~~--------~~~~~~~~--------~~~~~------------~~~ 190 (293)
...+..... .|+++++|+.+..... .....+.. ..... -..
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (240)
T PF05705_consen 79 SFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFGY 158 (240)
T ss_pred HHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 887776541 1248999988754211 00001110 00000 000
Q ss_pred c--------Chhhh--hcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCC-c-hHHHHHHHH
Q 022700 191 K--------NIDKI--RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLET-Y-PEYIKHLRK 255 (293)
Q Consensus 191 ~--------~~~~l--~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~-~-~~~~~~i~~ 255 (293)
. ..+.+ ....+|-++++++.|.+++.+..+++.+.... .++...++++.|..+.. . +++++.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~ 238 (240)
T PF05705_consen 159 PDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDE 238 (240)
T ss_pred CcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHh
Confidence 0 01111 23468999999999999999998888776543 45666789999987443 3 368899888
Q ss_pred HH
Q 022700 256 FI 257 (293)
Q Consensus 256 fl 257 (293)
|+
T Consensus 239 fw 240 (240)
T PF05705_consen 239 FW 240 (240)
T ss_pred hC
Confidence 74
No 167
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.39 E-value=1.8e-06 Score=78.14 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=66.1
Q ss_pred ceEEEEEcCCCC---ChhhHHHHHHHHHhhcCeeEEEEcccc----ccCCCCCC--CCCchhhhHHHHHHHHHHHh---c
Q 022700 67 RFTLLYSHGNAA---DLGQMLELFIELRAHLRVNIMSYDYSG----YGASTGKP--SEFNTYYDIEAVYNCLKREY---N 134 (293)
Q Consensus 67 ~~~vv~~hG~~~---~~~~~~~~~~~~~~~~g~~v~~~d~~g----~G~s~~~~--~~~~~~~d~~~~i~~l~~~~---~ 134 (293)
.|++|++||++- +..........++.+.++.||.++||- +-.+.... ....-+.|...+++|+++.. |
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 599999999653 221111222334477899999999983 22222111 13445688999999997764 4
Q ss_pred CCCccEEEEEeccChHHHHHHHHhcC---CccEEEEecc
Q 022700 135 VKQEELILYGQSVGSGPTLHLASRLQ---KLRGVVLHSA 170 (293)
Q Consensus 135 ~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p 170 (293)
-|+++|.|+|+|.||..+...+.... -++++|+.++
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 57899999999999999988777632 2899999987
No 168
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.37 E-value=3.9e-06 Score=72.04 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=73.7
Q ss_pred EEEEEEeCC---CCceEEEEEcCCCC---ChhhHHHHHHHHHhhcCeeEEEEcccc--ccCCCC-------CCCCCchhh
Q 022700 56 IVATFWRHP---FARFTLLYSHGNAA---DLGQMLELFIELRAHLRVNIMSYDYSG--YGASTG-------KPSEFNTYY 120 (293)
Q Consensus 56 l~~~~~~~~---~~~~~vv~~hG~~~---~~~~~~~~~~~~~~~~g~~v~~~d~~g--~G~s~~-------~~~~~~~~~ 120 (293)
++...|.|. .+.|++|+|||++. +......--..|+++.++.|+.++||- .|.-.. ......-+.
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~ 159 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLL 159 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHH
Confidence 333344443 35699999999653 222222234556444449999999983 221110 011123457
Q ss_pred hHHHHHHHHHH---HhcCCCccEEEEEeccChHHHHHHHHhcCC----ccEEEEecchh
Q 022700 121 DIEAVYNCLKR---EYNVKQEELILYGQSVGSGPTLHLASRLQK----LRGVVLHSAIL 172 (293)
Q Consensus 121 d~~~~i~~l~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~i~~~p~~ 172 (293)
|...+++|+++ .+|-|+++|.|+|+|.|++.++.+.+. |. +.++|+.||..
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 88888888865 466789999999999999999887766 42 66666666643
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=98.37 E-value=6.8e-06 Score=68.20 Aligned_cols=193 Identities=15% Similarity=0.091 Sum_probs=106.3
Q ss_pred CceEEEEEcCCCCChhh--HHHHHHHHHhhcCeeEEEEccc--------------cccCCC--CCCC-----C-Cchhhh
Q 022700 66 ARFTLLYSHGNAADLGQ--MLELFIELRAHLRVNIMSYDYS--------------GYGAST--GKPS-----E-FNTYYD 121 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~--~~~~~~~~~~~~g~~v~~~d~~--------------g~G~s~--~~~~-----~-~~~~~d 121 (293)
.-|+++++||..++... ...-+.....+.|+.++++|-. |.+.+= .... . ..++.-
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 46899999998887433 2445666667888888887433 111110 0000 0 111111
Q ss_pred HH-HHHHHHHHHhcCCC--ccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccch-------hh----hhh
Q 022700 122 IE-AVYNCLKREYNVKQ--EELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPV-------KM----TLW 186 (293)
Q Consensus 122 ~~-~~i~~l~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~-------~~----~~~ 186 (293)
+. +.-..+.+.+..+. ++..++||||||.-|+.+|.++| +++.+..++|+++......+. .. .+|
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~ 212 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAML 212 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhc
Confidence 22 22223444444333 27899999999999999999997 589999888877644111111 00 011
Q ss_pred h-------hcccChhhhhc--------------CCCcEEEEecCCCCccC--hhhHHHHHHHhc---CCcceEEecCCCC
Q 022700 187 F-------DIYKNIDKIRH--------------VNCPVLVIHGTNDDIVD--LSHGKRLWELSK---EKYDPLWVKGGGH 240 (293)
Q Consensus 187 ~-------~~~~~~~~l~~--------------i~~P~l~i~g~~D~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~H 240 (293)
- ..+++...+.+ ...++++-+|..|.+.. ....+.+.+++. ....+...++++|
T Consensus 213 G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~H 292 (316)
T COG0627 213 GPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDH 292 (316)
T ss_pred CCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCc
Confidence 0 11222222221 34567777888887764 223455555554 4445666678888
Q ss_pred CCCCCchHHHHHHHHHHHH
Q 022700 241 CNLETYPEYIKHLRKFINA 259 (293)
Q Consensus 241 ~~~~~~~~~~~~i~~fl~~ 259 (293)
.... ....++....|+..
T Consensus 293 sw~~-w~~~l~~~~~~~a~ 310 (316)
T COG0627 293 SWYF-WASQLADHLPWLAG 310 (316)
T ss_pred CHHH-HHHHHHHHHHHHHH
Confidence 6422 12344444455544
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=98.35 E-value=1.7e-05 Score=58.10 Aligned_cols=170 Identities=18% Similarity=0.194 Sum_probs=91.8
Q ss_pred EEEEcCCCCChhhHHH-HHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 70 LLYSHGNAADLGQMLE-LFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 70 vv~~hG~~~~~~~~~~-~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
|+++||+.++...... ++..++...+ |-.+-+. +........+.+.++.+..+.+- ....|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~--------~~i~y~~--p~l~h~p~~a~~ele~~i~~~~~--~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDV--------RDIEYST--PHLPHDPQQALKELEKAVQELGD--ESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccc--------cceeeec--CCCCCCHHHHHHHHHHHHHHcCC--CCceEEeecch
Confidence 7999999987766543 3333433322 2222222 11222334555555555556542 45899999999
Q ss_pred hHHHHHHHHhcCCccEEEEecchhhhhhhccchhh----hhhhhcc----cCh-----hhhhcCCCc-EEEEecCC-CCc
Q 022700 149 SGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKM----TLWFDIY----KNI-----DKIRHVNCP-VLVIHGTN-DDI 213 (293)
Q Consensus 149 g~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~----~~~~~~~----~~~-----~~l~~i~~P-~l~i~g~~-D~~ 213 (293)
|+.|.+++.++- ++.+ +++|.+...+.+..... .+-.+.| ..+ ..+..++.| .+++.... |.+
T Consensus 70 GY~At~l~~~~G-irav-~~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~~~~~~~l~~p~~~~lL~qtgDEv 147 (191)
T COG3150 70 GYYATWLGFLCG-IRAV-VFNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLCVLQFRELNRPRCLVLLSQTGDEV 147 (191)
T ss_pred HHHHHHHHHHhC-Chhh-hcCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHHHhhccccCCCcEEEeecccccHH
Confidence 999999998875 4444 44554433222211110 0011111 111 122333444 55555544 988
Q ss_pred cChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHH
Q 022700 214 VDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFIN 258 (293)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~ 258 (293)
.+...+... +... ...+++|++|.+... ....+.|..|..
T Consensus 148 LDyr~a~a~---y~~~-~~~V~dgg~H~F~~f-~~~l~~i~aF~g 187 (191)
T COG3150 148 LDYRQAVAY---YHPC-YEIVWDGGDHKFKGF-SRHLQRIKAFKG 187 (191)
T ss_pred HHHHHHHHH---hhhh-hheeecCCCccccch-HHhHHHHHHHhc
Confidence 766655444 3333 556788899977432 346677777764
No 171
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.33 E-value=4.5e-06 Score=68.80 Aligned_cols=106 Identities=15% Similarity=0.228 Sum_probs=74.7
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcC--eeEEEEccccccCCCCCCCC----CchhhhHHHHHHHHHHHhcCCCcc
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLR--VNIMSYDYSGYGASTGKPSE----FNTYYDIEAVYNCLKREYNVKQEE 139 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g--~~v~~~d~~g~G~s~~~~~~----~~~~~d~~~~i~~l~~~~~~~~~~ 139 (293)
.+.+++|+||+..+...--.-........| ...+.+.||..|.--+...+ .....+++.+|.+|.+.... ++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~--~~ 192 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV--KR 192 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC--ce
Confidence 578999999998776554444444445555 44678888876654332222 23446788899999888755 89
Q ss_pred EEEEEeccChHHHHHHHHhc----C-----CccEEEEecchhh
Q 022700 140 LILYGQSVGSGPTLHLASRL----Q-----KLRGVVLHSAILS 173 (293)
Q Consensus 140 i~l~G~S~Gg~~a~~~a~~~----p-----~v~~~i~~~p~~~ 173 (293)
|+|++||||..+++..+.+. . +++-+|+.+|=.+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999999987653 1 3788888887443
No 172
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.32 E-value=2.4e-06 Score=67.62 Aligned_cols=92 Identities=13% Similarity=0.010 Sum_probs=48.3
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhh-cCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc---CCCccEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAH-LRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN---VKQEELI 141 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~---~~~~~i~ 141 (293)
+.-.|||+||+.++..+|..+-..+... ..+.-..+.+.++.... ..+......-...+++++.+... ....+|.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 4568999999999998887665555330 11111111111111111 11111111222333444443332 1124899
Q ss_pred EEEeccChHHHHHHHHh
Q 022700 142 LYGQSVGSGPTLHLASR 158 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~ 158 (293)
++||||||.++-.+...
T Consensus 82 fIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 82 FIGHSLGGLIARYALGL 98 (217)
T ss_pred EEEecccHHHHHHHHHH
Confidence 99999999999877663
No 173
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.31 E-value=6.4e-06 Score=64.64 Aligned_cols=92 Identities=23% Similarity=0.272 Sum_probs=59.3
Q ss_pred EEcCCC--CChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhh-HHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 72 YSHGNA--ADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYD-IEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 72 ~~hG~~--~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d-~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
++|+.+ ++...|..+...+. ..+.++.++.+|++.+..... ..++ +...++.+.... ...+++++|||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~~~~g~~~~~~~~~---~~~~~~~~~~~~l~~~~--~~~~~~l~g~s~G 74 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR--GRRDVSALPLPGFGPGEPLPA---SADALVEAQAEAVLRAA--GGRPFVLVGHSSG 74 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC--CCccEEEecCCCCCCCCCCCC---CHHHHHHHHHHHHHHhc--CCCCeEEEEECHH
Confidence 344433 55566777777663 246799999999986543221 2222 223344444433 2368999999999
Q ss_pred hHHHHHHHHhcC----CccEEEEecc
Q 022700 149 SGPTLHLASRLQ----KLRGVVLHSA 170 (293)
Q Consensus 149 g~~a~~~a~~~p----~v~~~i~~~p 170 (293)
|.++..++.... .+.+++++.+
T Consensus 75 g~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 75 GLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 999998888643 3788887764
No 174
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.25 E-value=4.1e-05 Score=67.55 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=77.9
Q ss_pred CCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHH-----------HH-----HhhcCeeEEEEccc-cccCCCCC
Q 022700 53 GNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELFI-----------EL-----RAHLRVNIMSYDYS-GYGASTGK 112 (293)
Q Consensus 53 g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~-----------~~-----~~~~g~~v~~~d~~-g~G~s~~~ 112 (293)
+..+.++++... .+.|+|++++|+++++..+..+.+ .+ .-..-.+++.+|.| |+|.|...
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~ 139 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYAD 139 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCC
Confidence 567888888744 357999999999888755321110 00 00112458899975 88887643
Q ss_pred CCC-----CchhhhHHHHHHHHHHHhc-CCCccEEEEEeccChHHHHHHHHhc---------C--CccEEEEecchhhh
Q 022700 113 PSE-----FNTYYDIEAVYNCLKREYN-VKQEELILYGQSVGSGPTLHLASRL---------Q--KLRGVVLHSAILSG 174 (293)
Q Consensus 113 ~~~-----~~~~~d~~~~i~~l~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~---------p--~v~~~i~~~p~~~~ 174 (293)
... ....+|+..+++.+.+++. +...+++|+|+|+||..+-.+|... . +++++++-+|+++.
T Consensus 140 ~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 140 KADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 221 1123555555554443332 3347899999999999998877652 1 38899998887653
No 175
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.25 E-value=0.00023 Score=56.77 Aligned_cols=47 Identities=19% Similarity=0.173 Sum_probs=39.8
Q ss_pred HHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhh
Q 022700 127 NCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILS 173 (293)
Q Consensus 127 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~ 173 (293)
-++.+.+.++.++..++|||+||.+++.+...+|+ +...++++|.+.
T Consensus 126 P~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 126 PFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 34455566777889999999999999999999985 899999998765
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.25 E-value=1.6e-05 Score=70.07 Aligned_cols=108 Identities=18% Similarity=0.207 Sum_probs=69.9
Q ss_pred CceEEEEEcCCCCChhhH--HHHHHHHHhhcCeeEEEEccccccCCCCCCCC----------CchhhhHHHHHHHHHHHh
Q 022700 66 ARFTLLYSHGNAADLGQM--LELFIELRAHLRVNIMSYDYSGYGASTGKPSE----------FNTYYDIEAVYNCLKREY 133 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~--~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~----------~~~~~d~~~~i~~l~~~~ 133 (293)
++|++|++-|=+.-...+ ...+..++.+.|-.++++++|-+|+|.+.... ...+.|+...++++.++.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 378777776644332222 33667788888999999999999999743211 123478888888888665
Q ss_pred c-CCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhh
Q 022700 134 N-VKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILS 173 (293)
Q Consensus 134 ~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~ 173 (293)
. .+..+++++|-|+||.+|..+-.++|+ +.+.+..++.+.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3 234589999999999999999999997 788887776543
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.16 E-value=2.5e-05 Score=70.41 Aligned_cols=100 Identities=14% Similarity=0.201 Sum_probs=62.2
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHh---------------hcCeeEEEEcccc-----ccCCCCCCCCCchhhhHHHH
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRA---------------HLRVNIMSYDYSG-----YGASTGKPSEFNTYYDIEAV 125 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~---------------~~g~~v~~~d~~g-----~G~s~~~~~~~~~~~d~~~~ 125 (293)
++-+|+|++|..|+....+........ ...|+.+++|+-+ ||++ .....+-+.++
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~-----l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHI-----LLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHh-----HHHHHHHHHHH
Confidence 467899999999998777665544321 1235566666642 1211 11233455666
Q ss_pred HHHHHHHhcC----C---CccEEEEEeccChHHHHHHHHhcC----CccEEEEecc
Q 022700 126 YNCLKREYNV----K---QEELILYGQSVGSGPTLHLASRLQ----KLRGVVLHSA 170 (293)
Q Consensus 126 i~~l~~~~~~----~---~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~i~~~p 170 (293)
|.++.+.+.- + |..|+++||||||.+|..++.... .|..++..+.
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcC
Confidence 6666665532 1 456999999999999987666432 2666666653
No 178
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.13 E-value=5e-05 Score=61.38 Aligned_cols=108 Identities=15% Similarity=0.114 Sum_probs=64.1
Q ss_pred CceEEEEEcCCCCCh-hhHHHHHHHHHhhc---CeeEEEEccccccCCCCCCCC--CchhhhHHHHHHHHHHHhcC--CC
Q 022700 66 ARFTLLYSHGNAADL-GQMLELFIELRAHL---RVNIMSYDYSGYGASTGKPSE--FNTYYDIEAVYNCLKREYNV--KQ 137 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~-~~~~~~~~~~~~~~---g~~v~~~d~~g~G~s~~~~~~--~~~~~d~~~~i~~l~~~~~~--~~ 137 (293)
+.|+++++||-.... ......+..+..+. ...++.+|+----........ .....-+.+++=++.+.+.+ +.
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a 176 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADA 176 (299)
T ss_pred cccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccC
Confidence 579999999843211 12233445553332 344666665421000000000 11113344556667666653 23
Q ss_pred ccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhh
Q 022700 138 EELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILS 173 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~ 173 (293)
+.-+|+|.|+||.+++.++..+|. +..++..||.+.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 467999999999999999999995 888888888765
No 179
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.06 E-value=1.7e-05 Score=67.00 Aligned_cols=101 Identities=19% Similarity=0.151 Sum_probs=69.9
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCee---EEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEE
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVN---IMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILY 143 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 143 (293)
.-+++++||++.....|..+...+ ...|+. +..+++++. +. ........+.+...++.+....+. +++.++
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~--~~-~~~~~~~~~ql~~~V~~~l~~~ga--~~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRL-AILGWLTNGVYAFELSGG--DG-TYSLAVRGEQLFAYVDEVLAKTGA--KKVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhh-cchHHHhccccccccccc--CC-CccccccHHHHHHHHHHHHhhcCC--CceEEE
Confidence 458999999977777777665554 666766 778877754 11 111222234444445555545444 799999
Q ss_pred EeccChHHHHHHHHhcC---CccEEEEecchhh
Q 022700 144 GQSVGSGPTLHLASRLQ---KLRGVVLHSAILS 173 (293)
Q Consensus 144 G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~~~ 173 (293)
||||||..+..++...+ .++.++.+++.-.
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 99999999999998888 4999999987544
No 180
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.99 E-value=7.8e-05 Score=62.55 Aligned_cols=104 Identities=16% Similarity=0.264 Sum_probs=77.2
Q ss_pred eEEEEEcCCCCChhhHHH---HHHHHHhhcCeeEEEEccccccCCCCCCCC-------------CchhhhHHHHHHHHHH
Q 022700 68 FTLLYSHGNAADLGQMLE---LFIELRAHLRVNIMSYDYSGYGASTGKPSE-------------FNTYYDIEAVYNCLKR 131 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~---~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~-------------~~~~~d~~~~i~~l~~ 131 (293)
.+|+|.-|.-++.+.+.. ++-.++.+.+--++..++|-+|+|.+--.. .....|....+.++++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 668888898887766643 455666777878999999999998632111 1234788888888888
Q ss_pred HhcCCCccEEEEEeccChHHHHHHHHhcCC-cc-EEEEecch
Q 022700 132 EYNVKQEELILYGQSVGSGPTLHLASRLQK-LR-GVVLHSAI 171 (293)
Q Consensus 132 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~-~~i~~~p~ 171 (293)
.++-...+|+.+|-|+||+++..+=.++|+ +. ++...+|+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 876666799999999999999999999997 33 33444453
No 181
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.98 E-value=4.3e-05 Score=61.69 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=47.9
Q ss_pred CceEEEEEcCCCCCh---hhHHHHHHHHH-hhcCeeEEEEccccccCCCCCCCCCchhhhHHHH----HHHHHHHhcCCC
Q 022700 66 ARFTLLYSHGNAADL---GQMLELFIELR-AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAV----YNCLKREYNVKQ 137 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~---~~~~~~~~~~~-~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~----i~~l~~~~~~~~ 137 (293)
+..+||+.||.|.+. ..+......+- ..-|.-|.+++.- -+.+. ......+.++.+. .+.+.+...+.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~--D~~~s~f~~v~~Qv~~vc~~l~~~p~L~- 79 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSE--DVENSFFGNVNDQVEQVCEQLANDPELA- 79 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHH--HHHHHHHSHHHHHHHHHHHHHHH-GGGT-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcch--hhhhhHHHHHHHHHHHHHHHHhhChhhh-
Confidence 456789999998642 23333222221 1236667776652 11100 0011222333333 33333322222
Q ss_pred ccEEEEEeccChHHHHHHHHhcC--CccEEEEecc
Q 022700 138 EELILYGQSVGSGPTLHLASRLQ--KLRGVVLHSA 170 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p--~v~~~i~~~p 170 (293)
+-++++|+|.||.+.-.++.+.+ .|+.+|.+++
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 46999999999999999999986 5999999875
No 182
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.93 E-value=0.0018 Score=51.28 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=65.5
Q ss_pred EEeCCCCceEEEEEcCCC--CCh-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC----chhhhHHHHHHHHHHH
Q 022700 60 FWRHPFARFTLLYSHGNA--ADL-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF----NTYYDIEAVYNCLKRE 132 (293)
Q Consensus 60 ~~~~~~~~~~vv~~hG~~--~~~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~----~~~~d~~~~i~~l~~~ 132 (293)
...|+.++.+|=|+-|.. ... -.|..+++.+ .+.||.|++.-|.- + .+.. ...+.....++.+.+.
T Consensus 10 vl~P~~P~gvihFiGGaf~ga~P~itYr~lLe~L-a~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~ 82 (250)
T PF07082_consen 10 VLIPPRPKGVIHFIGGAFVGAAPQITYRYLLERL-ADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKR 82 (250)
T ss_pred EEeCCCCCEEEEEcCcceeccCcHHHHHHHHHHH-HhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556777777887743 222 4456677777 67899999987751 1 1111 1224455556666655
Q ss_pred hcCCC--ccEEEEEeccChHHHHHHHHhcC-CccEEEEec
Q 022700 133 YNVKQ--EELILYGQSVGSGPTLHLASRLQ-KLRGVVLHS 169 (293)
Q Consensus 133 ~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~ 169 (293)
.++.. -+++-+|||+|+-+-+.+...++ +-++-++++
T Consensus 83 ~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 83 GGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred cCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 44432 37888999999999999887765 345666665
No 183
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.93 E-value=0.0017 Score=57.58 Aligned_cols=115 Identities=17% Similarity=0.108 Sum_probs=67.8
Q ss_pred EEEEEEEeCCCCceEEEEEcCCCCChhhHHHH---HHHHHhhcCeeEEEEccccccCCCCC----CCCC-chh-------
Q 022700 55 KIVATFWRHPFARFTLLYSHGNAADLGQMLEL---FIELRAHLRVNIMSYDYSGYGASTGK----PSEF-NTY------- 119 (293)
Q Consensus 55 ~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~~~~~~~g~~v~~~d~~g~G~s~~~----~~~~-~~~------- 119 (293)
.|....+.|.+=..-++.+-|.+......... ........||+++.-|. ||..+... .... ...
T Consensus 16 ~i~fev~LP~~WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra 94 (474)
T PF07519_consen 16 NIRFEVWLPDNWNGRFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRA 94 (474)
T ss_pred eEEEEEECChhhccCeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhH
Confidence 66666676663223344444433322111111 02223578999999985 66655321 1110 011
Q ss_pred -hhHHHHHHHHH-HHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecc
Q 022700 120 -YDIEAVYNCLK-REYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSA 170 (293)
Q Consensus 120 -~d~~~~i~~l~-~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p 170 (293)
.+...+-+.+. .-++..++.-+..|.|-||..++..|.++|+ +.+++.-+|
T Consensus 95 ~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaP 148 (474)
T PF07519_consen 95 LHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAP 148 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCc
Confidence 12222223333 3456667889999999999999999999995 999999988
No 184
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.88 E-value=5.7e-05 Score=52.15 Aligned_cols=59 Identities=20% Similarity=0.272 Sum_probs=52.2
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCC-CCchHHHHHHHHHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNL-ETYPEYIKHLRKFINA 259 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~i~~fl~~ 259 (293)
..|+|++.++.|..+|.+.++.+.+.+++. .++.+++.||..+ ...+...+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999985 8999999999987 4445688888899974
No 185
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.87 E-value=0.00025 Score=56.23 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=63.5
Q ss_pred eEEEEEcCCCCChhh--HHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 68 FTLLYSHGNAADLGQ--MLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~--~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
-++|++||.++.... +..+...+-.--|..|++.|. |-| ..........+.+..+.+.+..... -++-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~-lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPE-LSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchh-ccCceEEEEE
Confidence 568899999876554 555555554445777888885 344 1011122233444444444442222 2357999999
Q ss_pred ccChHHHHHHHHhcC--CccEEEEecc
Q 022700 146 SVGSGPTLHLASRLQ--KLRGVVLHSA 170 (293)
Q Consensus 146 S~Gg~~a~~~a~~~p--~v~~~i~~~p 170 (293)
|.||.++-.++...+ .++..|.+++
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccC
Confidence 999999999988766 4888888775
No 186
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.79 E-value=7.2e-05 Score=46.14 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=29.2
Q ss_pred CCCCceeEEEEccCCCEEEEEEEeCCC-------CceEEEEEcCCCCChhhH
Q 022700 39 ADKNMDCHLLETKNGNKIVATFWRHPF-------ARFTLLYSHGNAADLGQM 83 (293)
Q Consensus 39 ~~~~~~~~~~~~~~g~~l~~~~~~~~~-------~~~~vv~~hG~~~~~~~~ 83 (293)
...++|+..+++.||..+....++.++ ++|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 457899999999999999988887654 589999999999998776
No 187
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.75 E-value=0.0003 Score=61.61 Aligned_cols=122 Identities=18% Similarity=0.217 Sum_probs=71.4
Q ss_pred CCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHHH-----------------HHhhcCeeEEEEccc-cccCCC
Q 022700 52 NGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELFIE-----------------LRAHLRVNIMSYDYS-GYGAST 110 (293)
Q Consensus 52 ~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~-----------------~~~~~g~~v~~~d~~-g~G~s~ 110 (293)
.+..+.++++... ..+|+||++.|+++++..+..+.+- ..-..-.+++.+|.| |.|.|.
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~ 101 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSY 101 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-E
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEee
Confidence 6678888888765 4679999999999887665322110 000112568999966 888886
Q ss_pred CCCCCC---chhhhHHHHHHHHHH---Hh-cCCCccEEEEEeccChHHHHHHHHh----c------C-CccEEEEecchh
Q 022700 111 GKPSEF---NTYYDIEAVYNCLKR---EY-NVKQEELILYGQSVGSGPTLHLASR----L------Q-KLRGVVLHSAIL 172 (293)
Q Consensus 111 ~~~~~~---~~~~d~~~~i~~l~~---~~-~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p-~v~~~i~~~p~~ 172 (293)
...... +..+++..+.++|+. ++ .....+++|.|.|+||..+-.+|.. . + +++++++.+|++
T Consensus 102 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 102 GNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWI 181 (415)
T ss_dssp ESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-S
T ss_pred ccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccc
Confidence 443332 222333333333332 22 2344589999999999988776653 2 1 389999998865
Q ss_pred h
Q 022700 173 S 173 (293)
Q Consensus 173 ~ 173 (293)
+
T Consensus 182 d 182 (415)
T PF00450_consen 182 D 182 (415)
T ss_dssp B
T ss_pred c
Confidence 4
No 188
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.67 E-value=0.00037 Score=54.27 Aligned_cols=80 Identities=19% Similarity=0.329 Sum_probs=50.5
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
.++..|||+.|+|.+...+..+... ....+ ++++|||..- . |. + + ..+ +.|.|++
T Consensus 9 ~~~~LilfF~GWg~d~~~f~hL~~~--~~~D~-l~~yDYr~l~-------~-----d~----~-~-~~y----~~i~lvA 63 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPSPFSHLILP--ENYDV-LICYDYRDLD-------F-----DF----D-L-SGY----REIYLVA 63 (213)
T ss_pred CCCeEEEEEecCCCChHHhhhccCC--CCccE-EEEecCcccc-------c-----cc----c-c-ccC----ceEEEEE
Confidence 3468999999999986555443211 12333 5678988221 1 11 1 1 122 7899999
Q ss_pred eccChHHHHHHHHhcCCccEEEEecc
Q 022700 145 QSVGSGPTLHLASRLQKLRGVVLHSA 170 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p~v~~~i~~~p 170 (293)
+|||-.+|..+....| ++..+.+++
T Consensus 64 WSmGVw~A~~~l~~~~-~~~aiAING 88 (213)
T PF04301_consen 64 WSMGVWAANRVLQGIP-FKRAIAING 88 (213)
T ss_pred EeHHHHHHHHHhccCC-cceeEEEEC
Confidence 9999999888765544 666666654
No 189
>PLN02606 palmitoyl-protein thioesterase
Probab=97.63 E-value=0.00067 Score=55.43 Aligned_cols=100 Identities=15% Similarity=0.072 Sum_probs=60.2
Q ss_pred CceEEEEEcCCC--CChhhHHHHHHHHHh-hcCeeEEEEccccccCCCCCCCC-CchhhhHHHHHHHHHHHhcCCCccEE
Q 022700 66 ARFTLLYSHGNA--ADLGQMLELFIELRA-HLRVNIMSYDYSGYGASTGKPSE-FNTYYDIEAVYNCLKREYNVKQEELI 141 (293)
Q Consensus 66 ~~~~vv~~hG~~--~~~~~~~~~~~~~~~-~~g~~v~~~d~~g~G~s~~~~~~-~~~~~d~~~~i~~l~~~~~~~~~~i~ 141 (293)
...+||+.||.+ ++...+..+...+ . ..|+-+.++. .|-+. ..+. ....+.+..+.+.+.+...+. +-+.
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i-~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFL-INHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHH-HhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhc-CceE
Confidence 345789999998 4444555544444 4 2354444443 22221 1111 223344555555554422222 4699
Q ss_pred EEEeccChHHHHHHHHhcC---CccEEEEecch
Q 022700 142 LYGQSVGSGPTLHLASRLQ---KLRGVVLHSAI 171 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~ 171 (293)
++|+|.||.++-.++.+.| .|+.+|.+++.
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999875 49999998753
No 190
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.59 E-value=0.0077 Score=52.20 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=78.0
Q ss_pred EccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCee-EEEEccccccCCCCCCCCCchhhhHHHHHH
Q 022700 49 ETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVN-IMSYDYSGYGASTGKPSEFNTYYDIEAVYN 127 (293)
Q Consensus 49 ~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~ 127 (293)
..+.+..+.+++.+.+-+.|..|++.|+-. .+.+...+. +...|.- .+.-|.|--|.+= ........+.+.++|+
T Consensus 271 ~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~M--Mk~Lg~PfLL~~DpRleGGaF-YlGs~eyE~~I~~~I~ 346 (511)
T TIGR03712 271 VDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFM--MKRLGAPFLLIGDPRLEGGAF-YLGSDEYEQGIINVIQ 346 (511)
T ss_pred ecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHH--HHhcCCCeEEeecccccccee-eeCcHHHHHHHHHHHH
Confidence 344566676666665557789999999754 333322111 1333433 4455666555432 1122223466888888
Q ss_pred HHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecchhh
Q 022700 128 CLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSAILS 173 (293)
Q Consensus 128 ~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p~~~ 173 (293)
...+.++.+.+.++|-|.|||..-|+.++++.. ..++|+-=|+++
T Consensus 347 ~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~N 391 (511)
T TIGR03712 347 EKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHhCCCHHHeeeccccccchhhhhhcccCC-CceEEEcCcccc
Confidence 888899999899999999999999999999864 456666666554
No 191
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.53 E-value=0.00047 Score=59.67 Aligned_cols=83 Identities=10% Similarity=0.145 Sum_probs=57.0
Q ss_pred hHHHHHHHHHhhcCeeE-----EE-EccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHH
Q 022700 82 QMLELFIELRAHLRVNI-----MS-YDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHL 155 (293)
Q Consensus 82 ~~~~~~~~~~~~~g~~v-----~~-~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 155 (293)
.|..++..| .+.||.. .+ +|+|--- ......+..+...|+.+.+.. .++++|+||||||.++..+
T Consensus 66 ~~~~li~~L-~~~GY~~~~~l~~~pYDWR~~~-----~~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENL-EKLGYDRGKDLFAAPYDWRLSP-----AERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHH-HhcCcccCCEEEEEeechhhch-----hhHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 677788887 6777652 23 6887211 112234456666666665443 4799999999999999998
Q ss_pred HHhcC-------CccEEEEecchhh
Q 022700 156 ASRLQ-------KLRGVVLHSAILS 173 (293)
Q Consensus 156 a~~~p-------~v~~~i~~~p~~~ 173 (293)
....+ .|+++|.+++...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 88763 3999999987544
No 192
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.40 E-value=0.0022 Score=52.53 Aligned_cols=102 Identities=11% Similarity=0.074 Sum_probs=59.8
Q ss_pred CCceEEEEEcCCCCChh--hHHHHHHHHHhh-cCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEE
Q 022700 65 FARFTLLYSHGNAADLG--QMLELFIELRAH-LRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELI 141 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~--~~~~~~~~~~~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~ 141 (293)
....++|+.||.|.+-. .+..+ ..++.+ -|..+.++.. |.+..........+.++.+.+.+.+...+. +-+.
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~-~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANF-TQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHH-HHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEE
Confidence 34457899999986543 22333 233233 3555665543 222111111222344444455444422222 4699
Q ss_pred EEEeccChHHHHHHHHhcC---CccEEEEecch
Q 022700 142 LYGQSVGSGPTLHLASRLQ---KLRGVVLHSAI 171 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~ 171 (293)
++|+|.||.++-.++.+.| .|+.+|.+++.
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999876 39999998753
No 193
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.35 E-value=0.0018 Score=58.88 Aligned_cols=92 Identities=13% Similarity=0.196 Sum_probs=59.6
Q ss_pred ceEEEEEcCCCCCh---hhH-HHHHHHHHhhcCeeEEEEcccc----ccCCC-CCCCCCchhhhHHHHHHHHHHH---hc
Q 022700 67 RFTLLYSHGNAADL---GQM-LELFIELRAHLRVNIMSYDYSG----YGAST-GKPSEFNTYYDIEAVYNCLKRE---YN 134 (293)
Q Consensus 67 ~~~vv~~hG~~~~~---~~~-~~~~~~~~~~~g~~v~~~d~~g----~G~s~-~~~~~~~~~~d~~~~i~~l~~~---~~ 134 (293)
.|++|++||++-.. ..+ ......++....+.|+.+.||- +.-.. ..........|...+++|+.+. ++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 69999999976322 222 1222334355578889999883 11111 1112233446888888888765 44
Q ss_pred CCCccEEEEEeccChHHHHHHHHh
Q 022700 135 VKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 135 ~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
-|+++|.++|||.||..+..+...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcC
Confidence 588999999999999988776553
No 194
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.32 E-value=0.0022 Score=55.48 Aligned_cols=106 Identities=13% Similarity=0.204 Sum_probs=78.3
Q ss_pred CCceEEEEEcCCCCChhhH----HHHHHHHHhhcCeeEEEEccccccCCCCCCCCC----------chhhhHHHHHHHHH
Q 022700 65 FARFTLLYSHGNAADLGQM----LELFIELRAHLRVNIMSYDYSGYGASTGKPSEF----------NTYYDIEAVYNCLK 130 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~----~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~----------~~~~d~~~~i~~l~ 130 (293)
..+|+.++|-|=+.....| ...+..++.+.|-.|+..++|-+|.|.+..... ..+.|+...|+.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 4678888898866544333 235566668889999999999999886433222 23478888888887
Q ss_pred HHhcCCCc-cEEEEEeccChHHHHHHHHhcCC-ccEEEEecc
Q 022700 131 REYNVKQE-ELILYGQSVGSGPTLHLASRLQK-LRGVVLHSA 170 (293)
Q Consensus 131 ~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p 170 (293)
.+++.... +.+.+|-|+-|.++..+=.++|+ +.+.+..+.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 77765443 89999999999999999999997 555555543
No 195
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.30 E-value=0.0036 Score=48.05 Aligned_cols=102 Identities=16% Similarity=0.192 Sum_probs=59.4
Q ss_pred CCceEEEEEcCCCCCh-hhHH---------------HHHHHHHhhcCeeEEEEcccc---ccCCCCCCCC--CchhhhHH
Q 022700 65 FARFTLLYSHGNAADL-GQML---------------ELFIELRAHLRVNIMSYDYSG---YGASTGKPSE--FNTYYDIE 123 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~-~~~~---------------~~~~~~~~~~g~~v~~~d~~g---~G~s~~~~~~--~~~~~d~~ 123 (293)
.++..+|++||.|--. ..|. +.+.+. .+.||.|+..+--- +-++...+.. ....+.+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA-v~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA-VAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH-HHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 3567999999976422 2332 223333 56788888887431 1111111111 11223333
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC---ccEEEEec
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK---LRGVVLHS 169 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~i~~~ 169 (293)
-+-.++.... ..+.+.++.||+||...+.+..++|. |.++.+..
T Consensus 178 yvw~~~v~pa--~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 178 YVWKNIVLPA--KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred HHHHHHhccc--CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 3333333332 45789999999999999999999984 54554443
No 196
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.18 E-value=0.029 Score=47.24 Aligned_cols=198 Identities=13% Similarity=0.116 Sum_probs=113.5
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
....||++=|+.+..+.+.........+.|+.++.+-.|-+-..-...........+...+..+.+.+..++.++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 34344555555555555655555555889999988877754333222222223345555666666666667789999999
Q ss_pred ccChHHHHHHH-H---hc-C---C-ccEEEEecc-hhhh-----hhh--cc--chhh---------------------hh
Q 022700 146 SVGSGPTLHLA-S---RL-Q---K-LRGVVLHSA-ILSG-----IRV--LY--PVKM---------------------TL 185 (293)
Q Consensus 146 S~Gg~~a~~~a-~---~~-p---~-v~~~i~~~p-~~~~-----~~~--~~--~~~~---------------------~~ 185 (293)
|+||...+... . +. | + ..++++.+. .... ... .. .... .+
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 196 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAY 196 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchh
Confidence 99998776644 1 22 3 2 454555542 1100 000 00 0000 00
Q ss_pred hhh------ccc------C--hhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC---CcceEEecCCCCCCCCC-ch
Q 022700 186 WFD------IYK------N--IDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE---KYDPLWVKGGGHCNLET-YP 247 (293)
Q Consensus 186 ~~~------~~~------~--~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~-~~ 247 (293)
+.. .+. . ...-.....+.+.+++..|.+++.+..+++.+.... ..+.+-+.++.|..+.. .+
T Consensus 197 ~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p 276 (350)
T KOG2521|consen 197 LLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFP 276 (350)
T ss_pred hhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCc
Confidence 000 000 0 011122356889999999999999999888665533 34455567788876433 23
Q ss_pred -HHHHHHHHHHHHhhhc
Q 022700 248 -EYIKHLRKFINAMEKL 263 (293)
Q Consensus 248 -~~~~~i~~fl~~~~~~ 263 (293)
.+.+...+|++.....
T Consensus 277 ~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 277 KTYLKKCSEFLRSVISS 293 (350)
T ss_pred HHHHHHHHHHHHhcccc
Confidence 6899999999987654
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.11 E-value=0.0029 Score=47.15 Aligned_cols=68 Identities=16% Similarity=0.007 Sum_probs=42.4
Q ss_pred CCccEEEEEeccChHHHHHHHHhcC-----CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCC
Q 022700 136 KQEELILYGQSVGSGPTLHLASRLQ-----KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTN 210 (293)
Q Consensus 136 ~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~ 210 (293)
+..+++++|||+||.+|..++.... ....++..++...+...... ..........+..++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~------------~~~~~~~~~~~~~i~~~~ 93 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE------------DRLDPSDALFVDRIVNDN 93 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH------------HhhhccCCccEEEEEECC
Confidence 3479999999999999999888764 35556666654432111100 011122345677888888
Q ss_pred CCccC
Q 022700 211 DDIVD 215 (293)
Q Consensus 211 D~~~~ 215 (293)
|.+..
T Consensus 94 D~v~~ 98 (153)
T cd00741 94 DIVPR 98 (153)
T ss_pred CccCC
Confidence 87644
No 198
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.97 E-value=0.015 Score=50.88 Aligned_cols=124 Identities=20% Similarity=0.225 Sum_probs=76.1
Q ss_pred EccCCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHHHH---H-hh-------------cCeeEEEEccc-ccc
Q 022700 49 ETKNGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELFIEL---R-AH-------------LRVNIMSYDYS-GYG 107 (293)
Q Consensus 49 ~~~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~---~-~~-------------~g~~v~~~d~~-g~G 107 (293)
....+..+.+++++.. ..+|+||++-|+++++... ..+.++ . .. .--+++.+|.| |.|
T Consensus 52 ~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvG 130 (454)
T KOG1282|consen 52 NESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVG 130 (454)
T ss_pred CCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCC
Confidence 3346889999998764 3579999999998876432 111110 0 00 01246777776 566
Q ss_pred CCCCCCC------CCchhhh-HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh----c-----C--CccEEEEec
Q 022700 108 ASTGKPS------EFNTYYD-IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR----L-----Q--KLRGVVLHS 169 (293)
Q Consensus 108 ~s~~~~~------~~~~~~d-~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~-----p--~v~~~i~~~ 169 (293)
.|-.... +....+| ...+.+|+.+.......+++|.|-|++|..+-.+|.. . | +++|+++-+
T Consensus 131 FSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGN 210 (454)
T KOG1282|consen 131 FSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGN 210 (454)
T ss_pred ccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecC
Confidence 5532221 1122233 3334456665555566799999999999766665542 2 3 589999988
Q ss_pred chhh
Q 022700 170 AILS 173 (293)
Q Consensus 170 p~~~ 173 (293)
|+++
T Consensus 211 g~td 214 (454)
T KOG1282|consen 211 GLTD 214 (454)
T ss_pred cccC
Confidence 8765
No 199
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.82 E-value=0.0042 Score=51.68 Aligned_cols=123 Identities=14% Similarity=0.101 Sum_probs=83.0
Q ss_pred ccEEEEEeccChHHHHHHHHhcCCccEEEEecc-hhhhhhhc---------------cchhhh------------hhhhc
Q 022700 138 EELILYGQSVGSGPTLHLASRLQKLRGVVLHSA-ILSGIRVL---------------YPVKMT------------LWFDI 189 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p-~~~~~~~~---------------~~~~~~------------~~~~~ 189 (293)
+.+.+-|-|--|..++..|...|++.+++-..- .++.-..+ .+.... ...+.
T Consensus 234 k~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~~I 313 (507)
T COG4287 234 KGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLLEI 313 (507)
T ss_pred eeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHHHh
Confidence 789999999999999999999998777764431 11100000 000000 01112
Q ss_pred ccChhhh-----hcCCCcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHHhhh
Q 022700 190 YKNIDKI-----RHVNCPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINAMEK 262 (293)
Q Consensus 190 ~~~~~~l-----~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~~ 262 (293)
.++.... .++.+|-.++.+..|++..++.+.-.++.+++.+-+..+|+..|.... ..+.+.+..|+.+.+.
T Consensus 314 iDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n--~~i~esl~~flnrfq~ 389 (507)
T COG4287 314 IDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN--QFIKESLEPFLNRFQM 389 (507)
T ss_pred hcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH--HHHHHHHHHHHHHHhc
Confidence 2233333 567899999999999999999999999999998888999999997642 1234556666666543
No 200
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.80 E-value=0.0043 Score=52.63 Aligned_cols=98 Identities=21% Similarity=0.254 Sum_probs=71.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCc------hhhhHHHHHHHHHHHhcCCCc
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFN------TYYDIEAVYNCLKREYNVKQE 138 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~------~~~d~~~~i~~l~~~~~~~~~ 138 (293)
-.+|+|+..-|++........-...++. -+-+.+++|-++.|.+.+.+.. ...|.-.+++.++..+. .
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~---~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP---G 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc---C
Confidence 4679999999988765444434444533 3479999999999987665432 23667777777876663 6
Q ss_pred cEEEEEeccChHHHHHHHHhcC-CccEEEEe
Q 022700 139 ELILYGQSVGSGPTLHLASRLQ-KLRGVVLH 168 (293)
Q Consensus 139 ~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~ 168 (293)
+.+--|-|=||+.++..=..+| ++.+.|..
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 8899999999999998888888 48877764
No 201
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.72 E-value=0.025 Score=49.63 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=70.8
Q ss_pred CCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHH--HHHH-------------h------hcCeeEEEEcc-ccc
Q 022700 52 NGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELF--IELR-------------A------HLRVNIMSYDY-SGY 106 (293)
Q Consensus 52 ~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~--~~~~-------------~------~~g~~v~~~d~-~g~ 106 (293)
.+..+.+++++.. ...|+|+++-|+++++..+..+. ..+. . ..-.+++.+|. -|.
T Consensus 48 ~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 127 (433)
T PLN03016 48 ENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGS 127 (433)
T ss_pred CCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCC
Confidence 3567888887653 35799999999988775421111 0000 0 01245888995 477
Q ss_pred cCCCCCCCCC--chhhhHHHHHHHHHH---Hh-cCCCccEEEEEeccChHHHHHHHHh----c-----C--CccEEEEec
Q 022700 107 GASTGKPSEF--NTYYDIEAVYNCLKR---EY-NVKQEELILYGQSVGSGPTLHLASR----L-----Q--KLRGVVLHS 169 (293)
Q Consensus 107 G~s~~~~~~~--~~~~d~~~~i~~l~~---~~-~~~~~~i~l~G~S~Gg~~a~~~a~~----~-----p--~v~~~i~~~ 169 (293)
|.|....... ...+.+.+...+++. ++ .....+++|.|.|+||..+-.+|.. . + +++|+++-+
T Consensus 128 GfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 207 (433)
T PLN03016 128 GFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGN 207 (433)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecC
Confidence 8775332211 111222233333322 22 2334689999999999877666543 1 2 488999988
Q ss_pred chhh
Q 022700 170 AILS 173 (293)
Q Consensus 170 p~~~ 173 (293)
|+.+
T Consensus 208 g~t~ 211 (433)
T PLN03016 208 PVTY 211 (433)
T ss_pred CCcC
Confidence 7543
No 202
>PLN02209 serine carboxypeptidase
Probab=96.69 E-value=0.017 Score=50.66 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=71.9
Q ss_pred cCCCEEEEEEEeCC---CCceEEEEEcCCCCChhhHHHHHH----------------HH-----HhhcCeeEEEEccc-c
Q 022700 51 KNGNKIVATFWRHP---FARFTLLYSHGNAADLGQMLELFI----------------EL-----RAHLRVNIMSYDYS-G 105 (293)
Q Consensus 51 ~~g~~l~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~----------------~~-----~~~~g~~v~~~d~~-g 105 (293)
..+..+.+++++.. ...|+|+++-|+++++..+..+.+ .+ .-..-.+++.+|.| |
T Consensus 49 ~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvG 128 (437)
T PLN02209 49 EENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVG 128 (437)
T ss_pred CCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCC
Confidence 34567888887654 357999999999887754322110 00 00012458888954 7
Q ss_pred ccCCCCCCCC--CchhhhHHHHHHHHHH---Hh-cCCCccEEEEEeccChHHHHHHHHh----c-----C--CccEEEEe
Q 022700 106 YGASTGKPSE--FNTYYDIEAVYNCLKR---EY-NVKQEELILYGQSVGSGPTLHLASR----L-----Q--KLRGVVLH 168 (293)
Q Consensus 106 ~G~s~~~~~~--~~~~~d~~~~i~~l~~---~~-~~~~~~i~l~G~S~Gg~~a~~~a~~----~-----p--~v~~~i~~ 168 (293)
.|.|-..... ....+++.+..+++.. ++ .....+++|.|.|+||..+-.+|.. . + +++++++.
T Consensus 129 tGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ig 208 (437)
T PLN02209 129 SGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLG 208 (437)
T ss_pred CCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEec
Confidence 7777432211 1112233333343333 22 2334589999999999877666542 1 2 47899998
Q ss_pred cchhh
Q 022700 169 SAILS 173 (293)
Q Consensus 169 ~p~~~ 173 (293)
+|+++
T Consensus 209 ng~td 213 (437)
T PLN02209 209 NPITH 213 (437)
T ss_pred CcccC
Confidence 88654
No 203
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.66 E-value=0.0036 Score=48.57 Aligned_cols=62 Identities=24% Similarity=0.253 Sum_probs=43.7
Q ss_pred eEEEEccccccCCCCC----C----CCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 97 NIMSYDYSGYGASTGK----P----SEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 97 ~v~~~d~~g~G~s~~~----~----~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
+|+++-||-....... . ....-+.|+.++.++.+++.+ +..+++|+|||.|+.+..+++.+.
T Consensus 47 ~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 47 NVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred ccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 5888888743221111 0 011235889999998888875 456999999999999999998864
No 204
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.65 E-value=0.0035 Score=45.77 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
.+.+.+..+.++.. ..++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 44455555555553 3789999999999999998876
No 205
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.64 E-value=0.0045 Score=49.09 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=52.7
Q ss_pred CEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHh
Q 022700 54 NKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREY 133 (293)
Q Consensus 54 ~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~ 133 (293)
.+..+..+..+ .+..+|.+-|.-.+...|..-+.-. +.. .......+.+.++.+.+.+
T Consensus 25 ~qF~A~~f~~~-~~~~~vaFRGTd~t~~~W~ed~~~~----------~~~-----------~~~~q~~A~~yl~~~~~~~ 82 (224)
T PF11187_consen 25 KQFSAVTFRLP-DGEYVVAFRGTDDTLVDWKEDFNMS----------FQD-----------ETPQQKSALAYLKKIAKKY 82 (224)
T ss_pred cCcEEEEEEeC-CCeEEEEEECCCCchhhHHHHHHhh----------cCC-----------CCHHHHHHHHHHHHHHHhC
Confidence 34555555433 4556777777655545555422211 100 0112234444455454443
Q ss_pred cCCCccEEEEEeccChHHHHHHHHhcC-----CccEEEEecc
Q 022700 134 NVKQEELILYGQSVGSGPTLHLASRLQ-----KLRGVVLHSA 170 (293)
Q Consensus 134 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~i~~~p 170 (293)
++++.+.|||.||.+|..++...+ +|..+....+
T Consensus 83 ---~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 83 ---PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred ---CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 256999999999999999998743 4777775543
No 206
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.63 E-value=0.017 Score=46.11 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC------CccEEEEecchh
Q 022700 122 IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ------KLRGVVLHSAIL 172 (293)
Q Consensus 122 ~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p------~v~~~i~~~p~~ 172 (293)
+...+..++++. +..++.+.|||+||.+|..++.... .+..+.+-+|-.
T Consensus 114 ~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 114 VLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 334444444443 3468999999999999999887532 355555555544
No 207
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.52 E-value=0.0052 Score=54.79 Aligned_cols=85 Identities=13% Similarity=0.159 Sum_probs=53.6
Q ss_pred hHHHHHHHHHhhcCee-----EEEEccccccCCCCCC-CCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHH
Q 022700 82 QMLELFIELRAHLRVN-----IMSYDYSGYGASTGKP-SEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHL 155 (293)
Q Consensus 82 ~~~~~~~~~~~~~g~~-----v~~~d~~g~G~s~~~~-~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 155 (293)
.|..++..| .+.||. ...+|+|-. .... .....+..+...|+.+.+..+ .++++|+||||||.+++.+
T Consensus 157 vw~kLIe~L-~~iGY~~~nL~gAPYDWRls---~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 157 VWAVLIANL-ARIGYEEKNMYMAAYDWRLS---FQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eHHHHHHHH-HHcCCCCCceeecccccccC---ccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHH
Confidence 446777777 678875 334455511 1001 112344667777776655532 3799999999999999987
Q ss_pred HHhc-----------C-----CccEEEEecchh
Q 022700 156 ASRL-----------Q-----KLRGVVLHSAIL 172 (293)
Q Consensus 156 a~~~-----------p-----~v~~~i~~~p~~ 172 (293)
...- + .|++.|.+++.+
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 7632 1 288888888643
No 208
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.42 E-value=0.014 Score=44.66 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=55.0
Q ss_pred eeEEEEccccccCCC-CCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh--cC-----CccEEEE
Q 022700 96 VNIMSYDYSGYGAST-GKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR--LQ-----KLRGVVL 167 (293)
Q Consensus 96 ~~v~~~d~~g~G~s~-~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p-----~v~~~i~ 167 (293)
+.+..++||-..... ...+...-..++...++....+. +..+++|+|+|+|+.++..++.. .+ +|.++++
T Consensus 40 ~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 556667787432211 00000112245555665555565 34699999999999999999888 32 4888888
Q ss_pred ecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCccC
Q 022700 168 HSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIVD 215 (293)
Q Consensus 168 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~ 215 (293)
++-........ .......-.++-++-..|.++.
T Consensus 118 fGdP~~~~~~~---------------~~~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 118 FGDPRRGAGQP---------------GIPGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp ES-TTTBTTTT---------------TBTCSCGGGEEEE-BTT-GGGG
T ss_pred ecCCcccCCcc---------------ccCcccccceeEEcCCCCcccC
Confidence 87433210000 0111123357888888999884
No 209
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.07 E-value=0.012 Score=51.99 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=68.4
Q ss_pred CCCceEEEEEcCCCC---ChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHH---hcCCC
Q 022700 64 PFARFTLLYSHGNAA---DLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKRE---YNVKQ 137 (293)
Q Consensus 64 ~~~~~~vv~~hG~~~---~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~---~~~~~ 137 (293)
+.++-.|+-+||+|. ++......+..++...|.-|+.+||.--.+.+ .....+++--+.-|+++. +|...
T Consensus 393 p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP----FPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP----FPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred CCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC----CCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 346678888999873 33444566677767788889999997332222 222335555556666554 45567
Q ss_pred ccEEEEEeccChHHHHHHHHhc----CC-ccEEEEecc
Q 022700 138 EELILYGQSVGSGPTLHLASRL----QK-LRGVVLHSA 170 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~----p~-v~~~i~~~p 170 (293)
++|+++|-|.||.+.+..+.+. -+ ..|+++..+
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 8999999999999876655542 23 578887654
No 210
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.99 E-value=0.045 Score=40.69 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=61.2
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCC-ccEEEEecchhhhhhhc---------cchhhhhhhhc
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQK-LRGVVLHSAILSGIRVL---------YPVKMTLWFDI 189 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~i~~~p~~~~~~~~---------~~~~~~~~~~~ 189 (293)
+.-.+.-.|++++. -+....+-|-||||+.|..+.-++|+ +.++|.+++..+..... +.....+....
T Consensus 85 ~rH~AyerYv~eEa--lpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~ 162 (227)
T COG4947 85 ERHRAYERYVIEEA--LPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGL 162 (227)
T ss_pred HHHHHHHHHHHHhh--cCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCC
Confidence 33445556666654 23567889999999999999999997 79999999877643211 11111111111
Q ss_pred ccC--hhhhhcCCCcEEEEecCCCCccChhhHHHHHHHhcC
Q 022700 190 YKN--IDKIRHVNCPVLVIHGTNDDIVDLSHGKRLWELSKE 228 (293)
Q Consensus 190 ~~~--~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 228 (293)
.++ .+.++ .+.+.+..|..|+..+. .+++.+.+.+
T Consensus 163 ~dp~~l~rlr--~~~~vfc~G~e~~~L~~--~~~L~~~l~d 199 (227)
T COG4947 163 ADPFRLERLR--RIDMVFCIGDEDPFLDN--NQHLSRLLSD 199 (227)
T ss_pred cChHHHHHHh--hccEEEEecCccccccc--hHHHHHHhcc
Confidence 111 22233 34677888888876543 3455555543
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.92 E-value=0.025 Score=48.94 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhhcCee------EEEEccccccCCCCCCC-CCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 81 GQMLELFIELRAHLRVN------IMSYDYSGYGASTGKPS-EFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 81 ~~~~~~~~~~~~~~g~~------v~~~d~~g~G~s~~~~~-~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
..|..++..+ ...||. -..+|+|- |-.... ....+..+...|+..-+..+- ++++|++|||||.+.+
T Consensus 124 ~~w~~~i~~l-v~~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~~G~--kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENL-VGIGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKLNGG--KKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHH-HhhCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHHcCC--CceEEEecCCccHHHH
Confidence 3567777776 777876 34667772 111111 112345566666666555433 8999999999999999
Q ss_pred HHHHhcC
Q 022700 154 HLASRLQ 160 (293)
Q Consensus 154 ~~a~~~p 160 (293)
.+....+
T Consensus 198 yFl~w~~ 204 (473)
T KOG2369|consen 198 YFLKWVE 204 (473)
T ss_pred HHHhccc
Confidence 9887654
No 212
>PLN02454 triacylglycerol lipase
Probab=95.91 E-value=0.019 Score=49.41 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++...++.+++.+.-..-+|++.|||+||.+|+.+|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 445555666666653211249999999999999998864
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.71 E-value=0.099 Score=45.83 Aligned_cols=107 Identities=19% Similarity=0.121 Sum_probs=67.4
Q ss_pred CceEEEEEcCCCCChhhHHHHHHH-------------------HHhhcCeeEEEEc-cccccCCCC--CCC---CCchhh
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIE-------------------LRAHLRVNIMSYD-YSGYGASTG--KPS---EFNTYY 120 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~-------------------~~~~~g~~v~~~d-~~g~G~s~~--~~~---~~~~~~ 120 (293)
++|+++++.|+++++..+..+.+- + .+. -.++.+| --|.|.|.. ... ....-.
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW-~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSW-LDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccc-ccC-CceEEEecCcccCcccccccccccchhccch
Confidence 589999999999988766544211 1 011 2478888 447777763 111 112225
Q ss_pred hHHHHHHHHHHHhc---CCCccEEEEEeccChHHHHHHHHhcC----CccEEEEecchhhh
Q 022700 121 DIEAVYNCLKREYN---VKQEELILYGQSVGSGPTLHLASRLQ----KLRGVVLHSAILSG 174 (293)
Q Consensus 121 d~~~~i~~l~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~p----~v~~~i~~~p~~~~ 174 (293)
|+..+.+.+.+.+. -...+.+|+|-|+||.-+-.+|.... ..++++.+++++..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvlig 238 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIG 238 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeec
Confidence 66666555544431 12258999999999999888887543 26777777776654
No 214
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.55 E-value=0.83 Score=37.36 Aligned_cols=64 Identities=23% Similarity=0.386 Sum_probs=44.7
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHh---cCC-cceEEecCCCCCCCCCch----HHHHHHHHHHHHhhhc
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELS---KEK-YDPLWVKGGGHCNLETYP----EYIKHLRKFINAMEKL 263 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~~~~~ 263 (293)
++-.+-+-|++|++....+++.....+ +.. .....-+++||+...... ++...|.+|+.+..+.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 467788999999987766665554443 433 244566999999755443 4667889999887754
No 215
>PF03283 PAE: Pectinacetylesterase
Probab=95.54 E-value=0.11 Score=44.58 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHH-hcCCCccEEEEEeccChHHHHHHHH
Q 022700 120 YDIEAVYNCLKRE-YNVKQEELILYGQSVGSGPTLHLAS 157 (293)
Q Consensus 120 ~d~~~~i~~l~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~ 157 (293)
..+.++++++.++ ++ ++++++|.|.|.||.-++..+.
T Consensus 138 ~i~~avl~~l~~~gl~-~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLP-NAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHhcCc-ccceEEEeccChHHHHHHHHHH
Confidence 6688899999888 43 4578999999999999887554
No 216
>PLN02408 phospholipase A1
Probab=95.46 E-value=0.023 Score=48.21 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.+.+.+..+.++++-...+|.+.|||+||.+|..+|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 344455555555542223699999999999999988753
No 217
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.41 E-value=0.17 Score=38.50 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC-CccEEEEecchhhhhhhccchhhhhhhhcccChhhhhc
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ-KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRH 198 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (293)
.++...++-|.... -...++.++|||+|+.++-.++...+ .+..+++++..--.. .....+.-
T Consensus 92 ~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~---------------~~a~~l~~ 155 (177)
T PF06259_consen 92 PRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGV---------------DSASDLGV 155 (177)
T ss_pred HHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCC---------------CCHHHcCC
Confidence 34555555554443 23468999999999999999888844 588888876432110 11233322
Q ss_pred CCCcEEEEecCCCCcc
Q 022700 199 VNCPVLVIHGTNDDIV 214 (293)
Q Consensus 199 i~~P~l~i~g~~D~~~ 214 (293)
-...++...+..|.+-
T Consensus 156 ~~~~v~a~~a~~D~I~ 171 (177)
T PF06259_consen 156 PPGHVYAMTAPGDPIA 171 (177)
T ss_pred CCCcEEEeeCCCCCcc
Confidence 2356888888888763
No 218
>PLN02571 triacylglycerol lipase
Probab=95.21 E-value=0.029 Score=48.29 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++...+..+.+++.-..-+|.+.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 345555555555553212369999999999999998875
No 219
>PLN00413 triacylglycerol lipase
Probab=95.06 E-value=0.035 Score=48.43 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLAS 157 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 157 (293)
.+...++.+.+++ +..++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 4555555555555 3368999999999999999885
No 220
>PLN02162 triacylglycerol lipase
Probab=95.02 E-value=0.036 Score=48.26 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHH
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLAS 157 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 157 (293)
..+.+.++.+..+. +..++++.|||+||.+|..++.
T Consensus 262 ~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 34444455444444 3368999999999999999765
No 221
>PLN02934 triacylglycerol lipase
Probab=94.87 E-value=0.041 Score=48.36 Aligned_cols=37 Identities=19% Similarity=0.431 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
..+...++.+.+++ +..++++.|||+||.+|..++..
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHHH
Confidence 34555666666665 33689999999999999998753
No 222
>PLN02324 triacylglycerol lipase
Probab=94.86 E-value=0.039 Score=47.44 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+.+...+..+.+++.-....|.+.|||+||.+|+.+|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345555555666654222379999999999999998864
No 223
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.69 E-value=0.072 Score=40.66 Aligned_cols=60 Identities=23% Similarity=0.314 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhcC----CcceEEecCCCCCCCCCch----HHHHHHHHHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSKE----KYDPLWVKGGGHCNLETYP----EYIKHLRKFINA 259 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~----~~~~~i~~fl~~ 259 (293)
++++|-|-|+.|+++...++....+.+.+ ....++.+++||+.+.... ++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 56888899999999999888777666543 2355677999999866654 456677777764
No 224
>PLN02802 triacylglycerol lipase
Probab=94.55 E-value=0.053 Score=47.71 Aligned_cols=39 Identities=21% Similarity=0.332 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
++.+.+..+.+++.-....|++.|||+||.+|..+|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344444555555532223799999999999999988753
No 225
>PLN02753 triacylglycerol lipase
Probab=93.88 E-value=0.085 Score=46.68 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHHhcC---CCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNV---KQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++...+..+.+++.- ...+|.+.|||+||.+|..+|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4455555556665532 13589999999999999998863
No 226
>PLN02761 lipase class 3 family protein
Probab=93.68 E-value=0.099 Score=46.23 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHhcC----CCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNV----KQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++...+..+.+.+.- ...+|.+.|||+||.+|..+|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455555566655521 22479999999999999998853
No 227
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.66 E-value=0.16 Score=43.24 Aligned_cols=88 Identities=15% Similarity=0.123 Sum_probs=46.9
Q ss_pred CCceEEEEEcCCCC-ChhhHHHHHHHHHhhc-CeeEEEEccccccCCCCC-CCCCc--hhhhHHHHHHHHHHHhcCCCcc
Q 022700 65 FARFTLLYSHGNAA-DLGQMLELFIELRAHL-RVNIMSYDYSGYGASTGK-PSEFN--TYYDIEAVYNCLKREYNVKQEE 139 (293)
Q Consensus 65 ~~~~~vv~~hG~~~-~~~~~~~~~~~~~~~~-g~~v~~~d~~g~G~s~~~-~~~~~--~~~d~~~~i~~l~~~~~~~~~~ 139 (293)
++.=.||+.||+.+ +...|........... +. .+..+|+-..... ..... .......+++.+.. ..+ ++
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~---~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~-~si--~k 151 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDK---LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYD-YSI--EK 151 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcc---eEeeeccccchhhccccceeeecccHHHHhhhhhc-ccc--ce
Confidence 45568999999877 5666766665553332 32 2222332211100 11111 11223333333321 223 79
Q ss_pred EEEEEeccChHHHHHHHHh
Q 022700 140 LILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 140 i~l~G~S~Gg~~a~~~a~~ 158 (293)
|-++|||+||.++..+...
T Consensus 152 ISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 152 ISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred eeeeeeecCCeeeeEEEEe
Confidence 9999999999988776654
No 228
>PLN02310 triacylglycerol lipase
Probab=93.61 E-value=0.1 Score=44.86 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHhcC--CCccEEEEEeccChHHHHHHHHh
Q 022700 121 DIEAVYNCLKREYNV--KQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 121 d~~~~i~~l~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
.+...+..+.+.+.- ...+|.+.|||+||.+|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344444555544421 12479999999999999998854
No 229
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=93.53 E-value=0.69 Score=38.28 Aligned_cols=94 Identities=18% Similarity=0.180 Sum_probs=61.9
Q ss_pred CCceEEEEEcCCCCC----h-hhHHHHHHHHHhhcCeeEEEEccccccCCCCCC----------------CCCchhhhHH
Q 022700 65 FARFTLLYSHGNAAD----L-GQMLELFIELRAHLRVNIMSYDYSGYGASTGKP----------------SEFNTYYDIE 123 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~----~-~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~----------------~~~~~~~d~~ 123 (293)
..+..|+++-|.... . .....+...+....+..++++--+|.|.-.-.. ........+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 356788888884321 1 223334444433367778888778877542110 0112336788
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.+..++++.+. ..++|+++|+|-|+++|-.+|..-
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHHH
Confidence 88999998886 557999999999999998888763
No 230
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.39 E-value=0.19 Score=40.73 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecc
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSA 170 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p 170 (293)
+.+..+++..+++.+ ...+|.+-|||+||.+|..+...+. +-.+.+.+|
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T KOG4540|consen 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 455666666777776 4479999999999999998877764 445555554
No 231
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.39 E-value=0.19 Score=40.73 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcCCccEEEEecc
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQKLRGVVLHSA 170 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~i~~~p 170 (293)
+.+..+++..+++.+ ...+|.+-|||+||.+|..+...+. +-.+.+.+|
T Consensus 259 ySa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesP 307 (425)
T COG5153 259 YSAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESP 307 (425)
T ss_pred hHHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccC-CceEEecCc
Confidence 455666666777776 4479999999999999998877764 445555554
No 232
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.25 E-value=0.49 Score=46.13 Aligned_cols=94 Identities=17% Similarity=0.222 Sum_probs=57.3
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHH-HHHHHHHHhcCCCccEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEA-VYNCLKREYNVKQEELILY 143 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~-~i~~l~~~~~~~~~~i~l~ 143 (293)
...|+++|+|..-+....+.. ++.+..+ |.+|.-..+.-..+..+++.+ .|+.+++.. +..+..++
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~----la~rle~-------PaYglQ~T~~vP~dSies~A~~yirqirkvQ--P~GPYrl~ 2187 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALES----LASRLEI-------PAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ--PEGPYRLA 2187 (2376)
T ss_pred ccCCceEEEeccccchHHHHH----HHhhcCC-------cchhhhccccCCcchHHHHHHHHHHHHHhcC--CCCCeeee
Confidence 467999999998766544444 4333333 333322223333344444433 344444332 33689999
Q ss_pred EeccChHHHHHHHHhcC---CccEEEEecch
Q 022700 144 GQSVGSGPTLHLASRLQ---KLRGVVLHSAI 171 (293)
Q Consensus 144 G~S~Gg~~a~~~a~~~p---~v~~~i~~~p~ 171 (293)
|+|+|+.++..+|.... ....+|++.+.
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred ccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999999998765 25668887653
No 233
>PLN02719 triacylglycerol lipase
Probab=93.18 E-value=0.13 Score=45.46 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHhcC---CCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNV---KQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++...+..+.+++.- ...+|.+.|||+||.+|..+|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4455555555555531 12479999999999999998864
No 234
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.99 E-value=0.47 Score=40.06 Aligned_cols=77 Identities=18% Similarity=0.117 Sum_probs=47.6
Q ss_pred eEEEEccc-cccCCCCCCCCC--c---hhhhHHHHHHHHHHHh-cCCCccEEEEEeccChHHHHHHHHh----c-----C
Q 022700 97 NIMSYDYS-GYGASTGKPSEF--N---TYYDIEAVYNCLKREY-NVKQEELILYGQSVGSGPTLHLASR----L-----Q 160 (293)
Q Consensus 97 ~v~~~d~~-g~G~s~~~~~~~--~---~~~d~~~~i~~l~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~----~-----p 160 (293)
+++.+|.| |.|.|-...... . ..+|+..++..+.+++ .+...+++|.|-|+||..+-.+|.. . +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 58999988 788875432211 1 1234333333333332 2345789999999999877766653 1 2
Q ss_pred --CccEEEEecchhh
Q 022700 161 --KLRGVVLHSAILS 173 (293)
Q Consensus 161 --~v~~~i~~~p~~~ 173 (293)
+++|+++-+|+++
T Consensus 83 ~inLkGi~IGNg~t~ 97 (319)
T PLN02213 83 PINLQGYMLGNPVTY 97 (319)
T ss_pred ceeeeEEEeCCCCCC
Confidence 4889998887543
No 235
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.98 E-value=0.14 Score=45.25 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=18.6
Q ss_pred ccEEEEEeccChHHHHHHHHh
Q 022700 138 EELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
.+|.+.|||+||.+|+.+|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999998854
No 236
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=92.89 E-value=0.71 Score=38.10 Aligned_cols=40 Identities=23% Similarity=0.396 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
...+..+..++.+.+. +.++|.++|+|-|+..|-.++..-
T Consensus 74 ~~~I~~ay~~l~~~~~-~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYE-PGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHHhccC-CcceEEEEecCccHHHHHHHHHHH
Confidence 3567777888877774 557899999999999999988764
No 237
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=92.72 E-value=0.42 Score=33.37 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=21.9
Q ss_pred cCCCEEEEEEEeCCC-CceEEEEEcCCCCChhhHHHH
Q 022700 51 KNGNKIVATFWRHPF-ARFTLLYSHGNAADLGQMLEL 86 (293)
Q Consensus 51 ~~g~~l~~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~ 86 (293)
-+|..|+.....+.+ ...+|||+||++++.-.|...
T Consensus 75 I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 75 IDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp ETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred EeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 369999988887665 456899999999998776553
No 238
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.38 E-value=0.18 Score=42.79 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
..+.+.++.+.+.+. .-.|.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 567777777777774 4689999999999999998875
No 239
>PLN02847 triacylglycerol lipase
Probab=92.32 E-value=0.22 Score=44.84 Aligned_cols=22 Identities=23% Similarity=0.363 Sum_probs=19.3
Q ss_pred CccEEEEEeccChHHHHHHHHh
Q 022700 137 QEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
.-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3589999999999999998775
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.66 E-value=0.92 Score=36.10 Aligned_cols=64 Identities=16% Similarity=0.288 Sum_probs=36.0
Q ss_pred CeeEEEEccccc-cCC--CCCCCCCchhhh-HHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 95 RVNIMSYDYSGY-GAS--TGKPSEFNTYYD-IEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 95 g~~v~~~d~~g~-G~s--~~~~~~~~~~~d-~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
|+.+..+++|.. +-- -+.........+ .....+.+..... ..++++++|+|+|+.++..++.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHH
Confidence 566777888751 110 011122223333 3333333333332 457899999999999999877753
No 241
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=90.14 E-value=0.84 Score=38.70 Aligned_cols=63 Identities=24% Similarity=0.285 Sum_probs=42.2
Q ss_pred ccEEEEEeccChHHHHHHHHhcC------CccEEEEecchhhhhhhccchhhhhhhhcccChhhh-hcCCCcEEEEecCC
Q 022700 138 EELILYGQSVGSGPTLHLASRLQ------KLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKI-RHVNCPVLVIHGTN 210 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~p------~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~P~l~i~g~~ 210 (293)
.+|.|+|||+|+.+...++.... -|..+++++....... ..| ..+ .-+.-.+.=+++++
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~-------~~W-------~~~r~vVsGr~vN~YS~~ 285 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDP-------EEW-------RKIRSVVSGRLVNVYSEN 285 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCH-------HHH-------HHHHHHccCeEEEEecCc
Confidence 58999999999999998776543 1788888876544211 111 112 23456777788888
Q ss_pred CCcc
Q 022700 211 DDIV 214 (293)
Q Consensus 211 D~~~ 214 (293)
|.+.
T Consensus 286 D~vL 289 (345)
T PF05277_consen 286 DWVL 289 (345)
T ss_pred HHHH
Confidence 8753
No 242
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=89.07 E-value=6.6 Score=32.82 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=69.3
Q ss_pred EccCCCEEEEEEEeCC----CCceEEEEEcCCCCChhh----HHHHH----------HHHHhhcCeeEEEEccc-cccCC
Q 022700 49 ETKNGNKIVATFWRHP----FARFTLLYSHGNAADLGQ----MLELF----------IELRAHLRVNIMSYDYS-GYGAS 109 (293)
Q Consensus 49 ~~~~g~~l~~~~~~~~----~~~~~vv~~hG~~~~~~~----~~~~~----------~~~~~~~g~~v~~~d~~-g~G~s 109 (293)
...++....++.|... ..+|..+.+.|..+.+.. |.+.- ..++... .++.+|-| |.|.|
T Consensus 9 ~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~a--dllfvDnPVGaGfS 86 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDA--DLLFVDNPVGAGFS 86 (414)
T ss_pred eeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhc--cEEEecCCCcCcee
Confidence 3445555555544322 347899999997654422 22110 0111332 37777776 55555
Q ss_pred CCCCCCCc---hhhhHHHHHHHHHHHh----cCCCccEEEEEeccChHHHHHHHHhcC----------CccEEEEecchh
Q 022700 110 TGKPSEFN---TYYDIEAVYNCLKREY----NVKQEELILYGQSVGSGPTLHLASRLQ----------KLRGVVLHSAIL 172 (293)
Q Consensus 110 ~~~~~~~~---~~~d~~~~i~~l~~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~p----------~v~~~i~~~p~~ 172 (293)
--.-...+ ..+-+.++++.++.-+ .++..+++|+..|+||-+|..++.... ++.++++-.+++
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 31111111 1122222333333222 233458999999999999988776421 377888877776
Q ss_pred hhhhhccc
Q 022700 173 SGIRVLYP 180 (293)
Q Consensus 173 ~~~~~~~~ 180 (293)
+.......
T Consensus 167 SP~D~V~S 174 (414)
T KOG1283|consen 167 SPEDFVFS 174 (414)
T ss_pred ChhHhhhc
Confidence 65544433
No 243
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.77 E-value=2.4 Score=35.79 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc------------C-----------C-cceEEecCCCCCCCCCch-HHHHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK------------E-----------K-YDPLWVKGGGHCNLETYP-EYIKHLR 254 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~-----------~-~~~~~~~~~~H~~~~~~~-~~~~~i~ 254 (293)
.+++|+..|+.|.+|+.-..+.+.+.+. + . .++..+.++||.... +| +..+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~-qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-RPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCc-CHHHHHHHHH
Confidence 5799999999999999988888877663 1 1 334456789998854 56 4778888
Q ss_pred HHHHH
Q 022700 255 KFINA 259 (293)
Q Consensus 255 ~fl~~ 259 (293)
.||..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 88853
No 244
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=85.70 E-value=2.2 Score=38.10 Aligned_cols=59 Identities=17% Similarity=0.205 Sum_probs=44.2
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc-------------------C---------------CcceEEecCCCCCCCCC
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK-------------------E---------------KYDPLWVKGGGHCNLET 245 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------------------~---------------~~~~~~~~~~~H~~~~~ 245 (293)
.++||+..|+.|.+|+....+.+.+.+. + ...++.+.++||....+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999999887777766442 0 12334457999999877
Q ss_pred chH-HHHHHHHHHH
Q 022700 246 YPE-YIKHLRKFIN 258 (293)
Q Consensus 246 ~~~-~~~~i~~fl~ 258 (293)
.|+ ..+.+..|+.
T Consensus 444 ~P~~~~~~i~~fl~ 457 (462)
T PTZ00472 444 QPAVALTMINRFLR 457 (462)
T ss_pred HHHHHHHHHHHHHc
Confidence 774 7788888885
No 245
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.86 E-value=3.3 Score=36.63 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc------------C-----------C-cceEEecCCCCCCCCCch-HHHHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK------------E-----------K-YDPLWVKGGGHCNLETYP-EYIKHLR 254 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------~-----------~-~~~~~~~~~~H~~~~~~~-~~~~~i~ 254 (293)
.+++|+..|+.|.+|+.-..+.+.+.+. + + .+++.+.++||.... +| +..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~-qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-RPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCC-CHHHHHHHHH
Confidence 5799999999999999988888877652 0 1 234556889999864 55 5778888
Q ss_pred HHHH
Q 022700 255 KFIN 258 (293)
Q Consensus 255 ~fl~ 258 (293)
.|+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 8885
No 246
>PLN02209 serine carboxypeptidase
Probab=83.81 E-value=3.8 Score=36.25 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=44.3
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc-------------C----------C-cceEEecCCCCCCCCCch-HHHHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK-------------E----------K-YDPLWVKGGGHCNLETYP-EYIKHLR 254 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------------~----------~-~~~~~~~~~~H~~~~~~~-~~~~~i~ 254 (293)
.+++|+..|+.|.+|+.-..+.+.+.+. + + .++..+.++||.... +| +..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~-qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEY-LPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCc-CHHHHHHHHH
Confidence 5799999999999999988888877652 0 1 244557889998854 55 5778888
Q ss_pred HHHH
Q 022700 255 KFIN 258 (293)
Q Consensus 255 ~fl~ 258 (293)
.|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 8885
No 247
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.12 E-value=2.5 Score=38.18 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcC-CCccEEEEEeccChHHHHHHHHh-----cC-------CccEEEEecc
Q 022700 122 IEAVYNCLKREYNV-KQEELILYGQSVGSGPTLHLASR-----LQ-------KLRGVVLHSA 170 (293)
Q Consensus 122 ~~~~i~~l~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~-----~p-------~v~~~i~~~p 170 (293)
...+++.+... ++ +..+|+.+||||||.++-.+... .| +-+|+|+++-
T Consensus 510 s~~lleql~~~-~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~ 570 (697)
T KOG2029|consen 510 SNELLEQLQAA-GVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSV 570 (697)
T ss_pred HHHHHHHHHHh-ccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEec
Confidence 34455555433 33 35689999999999988766543 23 3677777764
No 248
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=83.03 E-value=5.3 Score=35.42 Aligned_cols=87 Identities=18% Similarity=0.293 Sum_probs=49.3
Q ss_pred CceEEEEEcCCCCChhh-HHH--HHHHHHhhcCeeEEEEcccc--cc-----CCCCCCCCCchhhhHHHHHHHHHHH---
Q 022700 66 ARFTLLYSHGNAADLGQ-MLE--LFIELRAHLRVNIMSYDYSG--YG-----ASTGKPSEFNTYYDIEAVYNCLKRE--- 132 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~-~~~--~~~~~~~~~g~~v~~~d~~g--~G-----~s~~~~~~~~~~~d~~~~i~~l~~~--- 132 (293)
+..++|++.|+|-.... -.. --..++......|+.++||- +| ..+..+... -.-|-+-++.|+++.
T Consensus 134 n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNm-Gl~DQqLAl~WV~~Ni~a 212 (601)
T KOG4389|consen 134 NLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNM-GLLDQQLALQWVQENIAA 212 (601)
T ss_pred CceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCcc-chHHHHHHHHHHHHhHHH
Confidence 44588888886632211 011 11223344556677888872 11 222122222 234556667777665
Q ss_pred hcCCCccEEEEEeccChHHHH
Q 022700 133 YNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 133 ~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
+|-++++|.|+|.|.|+.-+.
T Consensus 213 FGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 213 FGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred hCCCcceEEEeccccchhhhh
Confidence 456889999999999976544
No 249
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=82.86 E-value=9.7 Score=29.78 Aligned_cols=62 Identities=16% Similarity=0.291 Sum_probs=44.7
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCe-eEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRV-NIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILY 143 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~ 143 (293)
...+|++.||...++...+..+...+.++|| +|+....-|+ -++..+++++++. ++ +.+.|+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y-------------P~~d~vi~~l~~~-~~--~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY-------------PLVDTVIEYLRKN-GI--KEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC-------------CcHHHHHHHHHHc-CC--ceEEEe
Confidence 4578899999988888888889999899998 5665554432 3466778888754 44 455554
No 250
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=78.64 E-value=2.6 Score=36.85 Aligned_cols=59 Identities=24% Similarity=0.384 Sum_probs=41.3
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc--------------C-----------CcceEEecCCCCCCCCCchH-HHHHH
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK--------------E-----------KYDPLWVKGGGHCNLETYPE-YIKHL 253 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~--------------~-----------~~~~~~~~~~~H~~~~~~~~-~~~~i 253 (293)
.+++|+.+|..|.+|+.-.++.+.+.+. . ...++.+.++||....++|+ ..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999999999998888652 1 12356679999998666664 67888
Q ss_pred HHHHH
Q 022700 254 RKFIN 258 (293)
Q Consensus 254 ~~fl~ 258 (293)
..||+
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 251
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=76.56 E-value=12 Score=30.41 Aligned_cols=94 Identities=22% Similarity=0.155 Sum_probs=54.1
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCC----Cchh---------hhHHHHHHHHHHH
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSE----FNTY---------YDIEAVYNCLKRE 132 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~----~~~~---------~d~~~~i~~l~~~ 132 (293)
..|.+++.||+++...........+ ...++.++..+....|.+...... .... ......+..-...
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLL-AEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCccccccCcchHHHHh-hhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 5689999999998876655544444 777887777765333322211110 0000 1111111111111
Q ss_pred hcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 133 YNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 133 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.+....+....|+++|+..+..++...+
T Consensus 127 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 127 LGASLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HhhhcCcceEEEEEeeccchHHHhhcch
Confidence 2223368899999999999999888776
No 252
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=75.50 E-value=8.1 Score=34.28 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=44.4
Q ss_pred CcEEEEecCCCCccChhhHHHHHHHhcC--------------C----------cceEEecCCCCCCCCCchH-HHHHHHH
Q 022700 201 CPVLVIHGTNDDIVDLSHGKRLWELSKE--------------K----------YDPLWVKGGGHCNLETYPE-YIKHLRK 255 (293)
Q Consensus 201 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--------------~----------~~~~~~~~~~H~~~~~~~~-~~~~i~~ 255 (293)
.++++..|+.|.+||.-..+.+.+.+.- . ..+..+.|+||.....+|+ ....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999999888877654411 0 1225568999988777775 5688888
Q ss_pred HHHH
Q 022700 256 FINA 259 (293)
Q Consensus 256 fl~~ 259 (293)
||..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9864
No 253
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=73.70 E-value=38 Score=25.94 Aligned_cols=39 Identities=8% Similarity=-0.051 Sum_probs=30.0
Q ss_pred CCceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEcc
Q 022700 65 FARFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDY 103 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~ 103 (293)
+.++.+|++-|+.++... ....+...+.+.|++++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 357899999998877644 445555555889999999985
No 254
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=68.10 E-value=19 Score=28.86 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=27.5
Q ss_pred CceEEEEEcCCC--CChhhHHHHHHHHHhhcCeeEEEEccc
Q 022700 66 ARFTLLYSHGNA--ADLGQMLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 66 ~~~~vv~~hG~~--~~~~~~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
.+|.|+|+.=.. .....|...+...+.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 467788888765 344556565666668899988877765
No 255
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=67.91 E-value=10 Score=24.30 Aligned_cols=44 Identities=16% Similarity=0.314 Sum_probs=31.0
Q ss_pred chhhhHHHHHHHHHHHhcCC-CccEEEEEeccChHHHHHHHHhcC
Q 022700 117 NTYYDIEAVYNCLKREYNVK-QEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.....+.+.++|++.+..++ ++++.++|-|.|=.+|.++++.+-
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 34577888889988765443 368999999999889988877753
No 256
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=66.01 E-value=52 Score=27.22 Aligned_cols=85 Identities=18% Similarity=0.189 Sum_probs=46.0
Q ss_pred HHHHHHhhcCeeEEEEccccccCCCCC--CCCCchhhhHHHHHHHHHHHhc-C---CCccEEEEEeccChHHHHHHHHhc
Q 022700 86 LFIELRAHLRVNIMSYDYSGYGASTGK--PSEFNTYYDIEAVYNCLKREYN-V---KQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 86 ~~~~~~~~~g~~v~~~d~~g~G~s~~~--~~~~~~~~d~~~~i~~l~~~~~-~---~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
-++.+ ..-..+++++.|.... |--. .....-.+...++++.+.++.. + +..++++.|.|+|++-+..+....
T Consensus 53 a~E~l-~~GD~A~va~QYSylP-Sw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~ 130 (289)
T PF10081_consen 53 ALEYL-YGGDVAIVAMQYSYLP-SWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGL 130 (289)
T ss_pred HHHHH-hCCCeEEEEecccccc-chHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccH
Confidence 34444 5556778888775211 1000 0011112334444444444332 1 123799999999988776654433
Q ss_pred C----CccEEEEecchh
Q 022700 160 Q----KLRGVVLHSAIL 172 (293)
Q Consensus 160 p----~v~~~i~~~p~~ 172 (293)
. ++.+++..+|..
T Consensus 131 ~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 131 DDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHhhhhcceEEEeCCCC
Confidence 2 489999998743
No 257
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=63.20 E-value=23 Score=27.61 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=39.1
Q ss_pred CceEEEEEcCCCCCh---hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc
Q 022700 66 ARFTLLYSHGNAADL---GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN 134 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~---~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~ 134 (293)
..++++++||..... ..-..+...+ .+.|..+...-+++-|..- .......+-...+++|+.+.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L-~~~g~~~~~~~~p~~gH~~--~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNAL-RKAGKPVELLIFPGEGHGF--GNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHH-HHTTSSEEEEEETT-SSST--TSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHH-HhcCCCEEEEEcCcCCCCC--CCchhHHHHHHHHHHHHHHHcC
Confidence 468899999976543 3334556666 6777666666666544321 1122233556677788877653
No 258
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.12 E-value=15 Score=27.41 Aligned_cols=78 Identities=14% Similarity=0.229 Sum_probs=47.4
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCee-EEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVN-IMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
+.-.||++-|++.....+.. +.....+. ++++||....- . .++ +.+ ..+-++.
T Consensus 10 gd~LIvyFaGwgtpps~v~H----LilpeN~dl~lcYDY~dl~l-------d---------fDf--sAy----~hirlvA 63 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNH----LILPENHDLLLCYDYQDLNL-------D---------FDF--SAY----RHIRLVA 63 (214)
T ss_pred CCEEEEEEecCCCCHHHHhh----ccCCCCCcEEEEeehhhcCc-------c---------cch--hhh----hhhhhhh
Confidence 34488999999888655443 32333333 67888873211 0 111 122 4678899
Q ss_pred eccChHHHHHHHHhcCCccEEEEecc
Q 022700 145 QSVGSGPTLHLASRLQKLRGVVLHSA 170 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~~p~v~~~i~~~p 170 (293)
+|||-.+|-++..-.+ ++..+.+++
T Consensus 64 wSMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 64 WSMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hhHHHHHHHHHHhhcc-ccceeeecC
Confidence 9999999888776655 555555543
No 259
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=62.52 E-value=47 Score=22.65 Aligned_cols=85 Identities=13% Similarity=0.181 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHH--HHHHHh
Q 022700 81 GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPT--LHLASR 158 (293)
Q Consensus 81 ~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a--~~~a~~ 158 (293)
....+.+..++...|+-.-.+.++..|.+..........+-=...++.+.+.+ ...+++++|-|--.-.- ..++.+
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF--PERKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHH
Confidence 44566777777778777666666666544321111111123344556666666 44799999999655433 345667
Q ss_pred cC-CccEEEE
Q 022700 159 LQ-KLRGVVL 167 (293)
Q Consensus 159 ~p-~v~~~i~ 167 (293)
+| +|.++.+
T Consensus 88 ~P~~i~ai~I 97 (100)
T PF09949_consen 88 FPGRILAIYI 97 (100)
T ss_pred CCCCEEEEEE
Confidence 78 4666653
No 260
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=58.26 E-value=46 Score=26.24 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=29.1
Q ss_pred CCceEEEEEcCCCCChhh--HHHHHHHHHhhcCeeEEEEccc
Q 022700 65 FARFTLLYSHGNAADLGQ--MLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~--~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
+.++.|.|++-.+.+... |.......+.+.|..+.-++.-
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 346789999987766655 6666777778999877777653
No 261
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.07 E-value=1.2e+02 Score=25.88 Aligned_cols=72 Identities=15% Similarity=0.230 Sum_probs=49.4
Q ss_pred hhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC---CccEEEEe
Q 022700 92 AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ---KLRGVVLH 168 (293)
Q Consensus 92 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~i~~ 168 (293)
..+||.|+.+|--|.= ....+..+.+..+.+-+.....-.|..+.++--+.-|.-++.-|..+. .+.++|+.
T Consensus 218 kar~~DvvliDTAGRL-----hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 218 KARGIDVVLIDTAGRL-----HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred HHcCCCEEEEeCcccc-----cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEEEE
Confidence 6778888888876532 223445566777666665544333455788879999999998888776 47888864
No 262
>KOG0094 consensus GTPase Rab6/YPT6/Ryh1, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=53.19 E-value=46 Score=25.93 Aligned_cols=55 Identities=16% Similarity=0.250 Sum_probs=40.6
Q ss_pred hhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 80 LGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
.+.|+.++..+....-.+|+++|.- ..+.+++...+|+.++..-+-+.-.|.|+|
T Consensus 81 QERFrslipsY~Rds~vaviVyDit----------~~~Sfe~t~kWi~dv~~e~gs~~viI~LVG 135 (221)
T KOG0094|consen 81 QERFRSLIPSYIRDSSVAVIVYDIT----------DRNSFENTSKWIEDVRRERGSDDVIIFLVG 135 (221)
T ss_pred HHHHhhhhhhhccCCeEEEEEEecc----------ccchHHHHHHHHHHHHhccCCCceEEEEEc
Confidence 3677778887777788889999975 345778899999999887764223456665
No 263
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=51.55 E-value=25 Score=25.18 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=17.3
Q ss_pred CCCceEEEEEcCCCCChhhHH
Q 022700 64 PFARFTLLYSHGNAADLGQML 84 (293)
Q Consensus 64 ~~~~~~vv~~hG~~~~~~~~~ 84 (293)
...+|.|+-+||+.|.+..+.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHH
Confidence 346899999999999887764
No 264
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=48.41 E-value=9.3 Score=32.28 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHH----HHhcCC---ccEEEEecchhhhhhhc--------cchh---
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHL----ASRLQK---LRGVVLHSAILSGIRVL--------YPVK--- 182 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~----a~~~p~---v~~~i~~~p~~~~~~~~--------~~~~--- 182 (293)
-+.++++.|..+--.+.++..|-|-|.||..++.- ....|. |+.+--.+-+++..... +...
T Consensus 159 Iw~av~~eLl~kGms~Ak~alLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~l 238 (402)
T KOG4287|consen 159 IWLAVMDELLAKGMSNAKQALLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTL 238 (402)
T ss_pred HHHHHHHHHHHhhhhHHHHHHhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheee
Confidence 35556666655433344678999999999888753 334452 44433222222211110 0000
Q ss_pred -------hhhhh------hcccChhhhhcCCCcEEEEecCCCC
Q 022700 183 -------MTLWF------DIYKNIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 183 -------~~~~~------~~~~~~~~l~~i~~P~l~i~g~~D~ 212 (293)
...-. ..|-+...++.+++|++++....|.
T Consensus 239 qg~~k~Lp~~Ct~~~~p~~CfFpq~v~~~irtP~F~vN~afD~ 281 (402)
T KOG4287|consen 239 QGLQKNLPQSCTSHLEPSLCFFPQYVLKTIRTPVFLVNAAFDS 281 (402)
T ss_pred ecccccCCHHHHhcCCchhhcchHHHHhhcCCceEehhhhhhH
Confidence 00000 0222456678899999999888775
No 265
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=48.36 E-value=28 Score=29.32 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCC--ccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQ--EELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..+++.+.++.+.+. .-=.+.|.|+||.+|..++...+
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCC
Confidence 345666666555310 12378999999999999987543
No 266
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=47.87 E-value=90 Score=26.28 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=25.6
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY 106 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~ 106 (293)
...++|.+.|+-.+ ...+.|++..||+|..+-++..
T Consensus 5 ~~~VvvamSgGVDS-----sVaa~Ll~~~g~~v~gv~M~nW 40 (377)
T KOG2805|consen 5 PDRVVVAMSGGVDS-----SVAARLLAARGYNVTGVFMKNW 40 (377)
T ss_pred cceEEEEecCCchH-----HHHHHHHHhcCCCeeEEeeecc
Confidence 45677777775444 4567777899999988877765
No 267
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=47.13 E-value=23 Score=29.73 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
..+++.+.++ ++ ..-.++|.|+|+.++..+++..
T Consensus 31 iGvL~aLee~-gi--~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 31 IGVIKALEEA-GI--PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCC
Confidence 4456666554 66 4568899999999999998764
No 268
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=46.98 E-value=25 Score=26.52 Aligned_cols=35 Identities=26% Similarity=0.158 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..+++.+.++ ++ ..-.+.|-|.|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-gi--~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRER-GP--LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCC
Confidence 3456666654 45 46789999999999999988654
No 269
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=46.84 E-value=20 Score=26.77 Aligned_cols=51 Identities=16% Similarity=0.251 Sum_probs=26.9
Q ss_pred EEccccccCCCCCCC--CCchhhhHHHHH----HHHHHHhcC--CCccEEEEEeccChH
Q 022700 100 SYDYSGYGASTGKPS--EFNTYYDIEAVY----NCLKREYNV--KQEELILYGQSVGSG 150 (293)
Q Consensus 100 ~~d~~g~G~s~~~~~--~~~~~~d~~~~i----~~l~~~~~~--~~~~i~l~G~S~Gg~ 150 (293)
.+-+-|||....... .....+.+...+ ..+.+.++. .+++|.|+|-|++..
T Consensus 58 rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 58 RWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 333446776521111 112335566566 677766643 467999999999987
No 270
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=46.53 E-value=80 Score=29.60 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=42.0
Q ss_pred CceEEEEEcCCCCCh---hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhc
Q 022700 66 ARFTLLYSHGNAADL---GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYN 134 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~---~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~ 134 (293)
-+.+++++||..... +.-..++..| ...|..|-..-+|+-|..-.. ......-+.++++|+.++++
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL-~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDAL-KRKGKPVELVVFPDEGHGFSR--PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHH-HHcCceEEEEEeCCCCcCCCC--chhHHHHHHHHHHHHHHHhc
Confidence 467899999976544 3334555666 668888777766654433311 33455667777888877653
No 271
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=46.32 E-value=17 Score=30.59 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=20.9
Q ss_pred HHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 130 KREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 130 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
.+..|+ .+-.++|||+|=+.|+.++..
T Consensus 78 l~~~Gi--~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 78 LRSWGI--KPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHTTH--CESEEEESTTHHHHHHHHTTS
T ss_pred hccccc--ccceeeccchhhHHHHHHCCc
Confidence 355676 778899999998888876654
No 272
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.98 E-value=47 Score=29.93 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=26.8
Q ss_pred ccEEEEEeccChHHHHHHHHhc---C--C-ccEEEEecchhh
Q 022700 138 EELILYGQSVGSGPTLHLASRL---Q--K-LRGVVLHSAILS 173 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~---p--~-v~~~i~~~p~~~ 173 (293)
.||.|+|+|+|+.+.+...... . . |..+++++....
T Consensus 447 RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 447 RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 6899999999999998655432 1 2 788888875443
No 273
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=45.90 E-value=29 Score=28.72 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=20.5
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
...++ .+-.++|||+|-+.|+.++..
T Consensus 77 ~~~Gi--~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 77 RSWGV--RPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHcCC--cccEEEecCHHHHHHHHHhCC
Confidence 45677 677999999999888877654
No 274
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.84 E-value=27 Score=27.98 Aligned_cols=37 Identities=32% Similarity=0.216 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.-+++++.++ ++.++.-.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 4567777654 454345689999999999999988654
No 275
>PRK02399 hypothetical protein; Provisional
Probab=45.45 E-value=2.1e+02 Score=25.13 Aligned_cols=88 Identities=18% Similarity=0.236 Sum_probs=52.3
Q ss_pred EEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCC--C--------C---ch---------hhhHHH-HHH
Q 022700 71 LYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPS--E--------F---NT---------YYDIEA-VYN 127 (293)
Q Consensus 71 v~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~--~--------~---~~---------~~d~~~-~i~ 127 (293)
|++-|....+..-..++.....+.|..|+.+|.-..|....... . . .. .+-+.. +..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 56667777776666666776678899999999844432211110 0 0 00 011111 122
Q ss_pred HHH---HHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 128 CLK---REYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 128 ~l~---~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
++. ++-.+ .-++-+|-|.|..++..+....|
T Consensus 86 ~v~~L~~~g~i--~gviglGGs~GT~lat~aMr~LP 119 (406)
T PRK02399 86 FVRELYERGDV--AGVIGLGGSGGTALATPAMRALP 119 (406)
T ss_pred HHHHHHhcCCc--cEEEEecCcchHHHHHHHHHhCC
Confidence 222 22223 56888999999999999998887
No 276
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=45.16 E-value=54 Score=24.45 Aligned_cols=38 Identities=5% Similarity=-0.019 Sum_probs=25.9
Q ss_pred ceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEccc
Q 022700 67 RFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
++.+|++-|..++... ....+...+.+.|+.++.+|..
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 4789999999877654 3344444447889999999853
No 277
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=44.47 E-value=2.3e+02 Score=25.23 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=49.2
Q ss_pred HHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC---Cc
Q 022700 86 LFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ---KL 162 (293)
Q Consensus 86 ~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v 162 (293)
-+..+ .+.+|.|+.+|-.|.-. .-+++-+-+..+.+.. +|..+.++--||=|.-|...|..+. .+
T Consensus 174 al~~a-k~~~~DvvIvDTAGRl~---------ide~Lm~El~~Ik~~~--~P~E~llVvDam~GQdA~~~A~aF~e~l~i 241 (451)
T COG0541 174 ALEKA-KEEGYDVVIVDTAGRLH---------IDEELMDELKEIKEVI--NPDETLLVVDAMIGQDAVNTAKAFNEALGI 241 (451)
T ss_pred HHHHH-HHcCCCEEEEeCCCccc---------ccHHHHHHHHHHHhhc--CCCeEEEEEecccchHHHHHHHHHhhhcCC
Confidence 33444 67788888888765321 1234444444555544 6788999999999999999998876 38
Q ss_pred cEEEEe
Q 022700 163 RGVVLH 168 (293)
Q Consensus 163 ~~~i~~ 168 (293)
.++|+.
T Consensus 242 tGvIlT 247 (451)
T COG0541 242 TGVILT 247 (451)
T ss_pred ceEEEE
Confidence 898885
No 278
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.47 E-value=1.1e+02 Score=27.56 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=46.8
Q ss_pred EEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChH
Q 022700 71 LYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSG 150 (293)
Q Consensus 71 v~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~ 150 (293)
+|--|++.+.......+-..+...||.|+.+|-.|.-... ..+...+.-+.+.. .++.|..+|.-+=|.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~--~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVN--KPDLILFVGEALVGN 510 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcC--CCceEEEehhhhhCc
Confidence 4445666665555555556668899999999987543222 11233333344333 558899999887776
Q ss_pred HHHHHHH
Q 022700 151 PTLHLAS 157 (293)
Q Consensus 151 ~a~~~a~ 157 (293)
=++.-+.
T Consensus 511 dsv~q~~ 517 (587)
T KOG0781|consen 511 DSVDQLK 517 (587)
T ss_pred HHHHHHH
Confidence 6655443
No 279
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=44.07 E-value=2.3e+02 Score=25.00 Aligned_cols=88 Identities=15% Similarity=0.147 Sum_probs=52.2
Q ss_pred EEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC------------c----------hhhh-HHHHHH
Q 022700 71 LYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF------------N----------TYYD-IEAVYN 127 (293)
Q Consensus 71 v~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~------------~----------~~~d-~~~~i~ 127 (293)
|++=|....+..-..++.....+.|..++.+|.--.+.......-. . ..+- ...+..
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 83 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAAR 83 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHH
Confidence 4455666666555556666668899999999975444433211100 0 0000 111222
Q ss_pred HHHHHhc---CCCccEEEEEeccChHHHHHHHHhcC
Q 022700 128 CLKREYN---VKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 128 ~l~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
++.+.+. + .-|+-+|-|.|..++..+....|
T Consensus 84 ~v~~l~~~g~i--~Gvi~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 84 FVSDLYDEGKI--DGVIGIGGSGGTALATAAMRALP 117 (403)
T ss_pred HHHHHHhcCCc--cEEEEecCCccHHHHHHHHHhCC
Confidence 3333332 3 56888999999999999998887
No 280
>PRK02929 L-arabinose isomerase; Provisional
Probab=44.07 E-value=2e+02 Score=26.16 Aligned_cols=20 Identities=20% Similarity=0.434 Sum_probs=15.6
Q ss_pred CCCCCCCchHHHHHHHHHHHHhh
Q 022700 239 GHCNLETYPEYIKHLRKFINAME 261 (293)
Q Consensus 239 ~H~~~~~~~~~~~~i~~fl~~~~ 261 (293)
||. +.+++.+.|.+|++...
T Consensus 149 G~~---~d~~v~~~i~~w~raa~ 168 (499)
T PRK02929 149 GHW---QDPEVQERIGAWMRVAA 168 (499)
T ss_pred EeC---CCHHHHHHHHHHHHHHH
Confidence 664 56789999999998654
No 281
>PRK10279 hypothetical protein; Provisional
Probab=43.74 E-value=25 Score=29.44 Aligned_cols=34 Identities=32% Similarity=0.262 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.-+++.+.+ .++ ..-.+.|.|+|+.++..+|...
T Consensus 21 iGVL~aL~E-~gi--~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKK-VGI--EIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHH-cCC--CcCEEEEEcHHHHHHHHHHcCC
Confidence 445666665 466 5678999999999999988643
No 282
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=43.37 E-value=28 Score=26.68 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..+++.+.++ ++ ..-.+.|.|.||.++..++....
T Consensus 15 ~Gvl~~L~e~-~~--~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 15 IGALKALEEA-GI--LKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHHc-CC--CcceEEEECHHHHHHHHHHcCCC
Confidence 3556666544 44 44789999999999999887543
No 283
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.07 E-value=32 Score=27.28 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.+++.+.++ ++ ..-.+.|.|.|+.++..++...
T Consensus 17 GvL~aL~e~-gi--~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEM-GL--EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHc-CC--CceEEEEeCHHHHHHHHHHcCC
Confidence 455666544 55 4557999999999999998754
No 284
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=41.64 E-value=36 Score=28.26 Aligned_cols=27 Identities=22% Similarity=0.091 Sum_probs=20.7
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
...++ .+..++|||+|=+.|+.++...
T Consensus 71 ~~~g~--~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 71 LALLP--RPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HhcCC--CCcEEeecCHHHHHHHHHhCCC
Confidence 34566 6889999999998888776543
No 285
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=40.83 E-value=2.5e+02 Score=24.68 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhhcCeeEEEEccccc---cCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 82 QMLELFIELRAHLRVNIMSYDYSGY---GASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 82 ~~~~~~~~~~~~~g~~v~~~d~~g~---G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
.....+..+ .+.|+.|+-+. +|+ |+.. .......+++...+........+...++.+-|-
T Consensus 134 ~~~~Nl~~L-~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 134 ATQRNLATL-RSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHH-HHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCEEEEeCC
Confidence 345667777 77898776543 333 2222 111222344433333322222344567777777
No 286
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=39.71 E-value=2.3e+02 Score=24.41 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=32.4
Q ss_pred hhhhhcCCCcEEEEecCCCCccChhhHHH-HH----------------HHhcCCcceEEecCCCCCCCCCchHHHHHHHH
Q 022700 193 IDKIRHVNCPVLVIHGTNDDIVDLSHGKR-LW----------------ELSKEKYDPLWVKGGGHCNLETYPEYIKHLRK 255 (293)
Q Consensus 193 ~~~l~~i~~P~l~i~g~~D~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~ 255 (293)
+.-++.++.|++.++-.-+.-+|.+.... +. .+++ ....++ .||. +.+++++.|.+
T Consensus 90 I~gl~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~g--i~~kvV--~G~w---~D~~v~~~I~~ 162 (359)
T PF02610_consen 90 IPGLQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMG--IPRKVV--VGHW---QDEEVWAEIGD 162 (359)
T ss_dssp HHHHHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT----EEEE--ES-T---T-HHHHHHHHH
T ss_pred HHHHHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhC--CCcCeE--eeeC---CCHHHHHHHHH
Confidence 34567778999999998887777554321 11 1222 233444 3674 46789999999
Q ss_pred HHHHhhh
Q 022700 256 FINAMEK 262 (293)
Q Consensus 256 fl~~~~~ 262 (293)
|.+....
T Consensus 163 W~rAA~~ 169 (359)
T PF02610_consen 163 WMRAAAA 169 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987543
No 287
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=39.41 E-value=28 Score=32.00 Aligned_cols=43 Identities=19% Similarity=0.363 Sum_probs=31.5
Q ss_pred CCcEEEEecCCCCccChhhHHHHHHHhc----C---CcceEEecCCCCCC
Q 022700 200 NCPVLVIHGTNDDIVDLSHGKRLWELSK----E---KYDPLWVKGGGHCN 242 (293)
Q Consensus 200 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~H~~ 242 (293)
..|.+++||..|-++|..+..+-+-.+. + ....+.+.++.|+.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 5799999999999999877655544331 1 23556678999985
No 288
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=39.37 E-value=83 Score=25.57 Aligned_cols=40 Identities=13% Similarity=0.128 Sum_probs=24.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCee-EEEEccc
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVN-IMSYDYS 104 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~ 104 (293)
+..+.|+++.-.......+...+...+.+.|+. |-.++.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 456788888866555545455555555788874 5555553
No 289
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=39.32 E-value=39 Score=27.82 Aligned_cols=22 Identities=27% Similarity=0.258 Sum_probs=18.1
Q ss_pred ccEEEEEeccChHHHHHHHHhc
Q 022700 138 EELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.+-.++|||+|=+.|+.++...
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCCC
Confidence 6789999999998888777543
No 290
>PRK12467 peptide synthase; Provisional
Probab=38.50 E-value=1.4e+02 Score=35.00 Aligned_cols=87 Identities=11% Similarity=-0.017 Sum_probs=50.6
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEec
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQS 146 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S 146 (293)
.+.++..|+..+....+..+...+ . .+..++.+..++.-.... ......+-.....++++... ...+..+.|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l-~-~~~~~~~l~~~~~~~d~~--~~~~~~~~~~~y~~~~~~~~--~~~p~~l~g~s 3765 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVIL-E-GDRHVLGLTCRHLLDDGW--QDTSLQAMAVQYADYILWQQ--AKGPYGLLGWS 3765 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHh-C-CCCcEEEEeccccccccC--CccchHHHHHHHHHHHHHhc--cCCCeeeeeee
Confidence 466999999877765555544444 2 234577776665432221 11111122333344444332 22578999999
Q ss_pred cChHHHHHHHHhc
Q 022700 147 VGSGPTLHLASRL 159 (293)
Q Consensus 147 ~Gg~~a~~~a~~~ 159 (293)
+||.++..++...
T Consensus 3766 ~g~~~a~~~~~~l 3778 (3956)
T PRK12467 3766 LGGTLARLVAELL 3778 (3956)
T ss_pred cchHHHHHHHHHH
Confidence 9999999888764
No 291
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=38.24 E-value=2.4e+02 Score=23.59 Aligned_cols=69 Identities=14% Similarity=0.178 Sum_probs=37.9
Q ss_pred CccEEEEEeccChHHHHH-HHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCC
Q 022700 137 QEELILYGQSVGSGPTLH-LASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDD 212 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~~a~~-~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~ 212 (293)
|.+|-++-||..|.+... +|..+|-+-..+...|-.. .+ ..|.-.++-.-.-+-+.+.|.+++....|-
T Consensus 124 PGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~rs~-----~p--~tFMSNMlYAcSilyktklp~ivvfNK~Dv 193 (366)
T KOG1532|consen 124 PGQIEAFTWSASGSIITETLASSFPTVVVYVVDTPRST-----SP--TTFMSNMLYACSILYKTKLPFIVVFNKTDV 193 (366)
T ss_pred CCceEEEEecCCccchHhhHhhcCCeEEEEEecCCcCC-----Cc--hhHHHHHHHHHHHHHhccCCeEEEEecccc
Confidence 578889999988887776 4556675444444333111 00 001111111122333557899999998884
No 292
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=37.68 E-value=1.1e+02 Score=24.73 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=20.8
Q ss_pred HHHHHHHHhhcCeeEEEEccccccCCCC
Q 022700 84 LELFIELRAHLRVNIMSYDYSGYGASTG 111 (293)
Q Consensus 84 ~~~~~~~~~~~g~~v~~~d~~g~G~s~~ 111 (293)
...+..| .+.|..|..+|.-|.|+++.
T Consensus 60 ~amve~L-~~~GvdV~ifddtg~~~TPD 86 (318)
T COG4874 60 NAMVEGL-RQAGVDVVIFDDTGQGETPD 86 (318)
T ss_pred HHHHHHH-HhcCceEEEeecCCCCCCCc
Confidence 3445556 78899999999998887753
No 293
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=37.14 E-value=2.5e+02 Score=23.58 Aligned_cols=90 Identities=21% Similarity=0.148 Sum_probs=58.5
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCC-------------------c----hhhhHHHH
Q 022700 69 TLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEF-------------------N----TYYDIEAV 125 (293)
Q Consensus 69 ~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~-------------------~----~~~d~~~~ 125 (293)
..|++-|.+..+..-..++..+....|-.++.+|..-.+......... + ...-.++.
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 357778888887777777777778889999999975432211111000 0 00112344
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.+++.++.++ .-++-+|-|.|..++.-.+...|
T Consensus 83 ~r~l~sR~dV--~gmig~GGsgGT~lit~~m~~LP 115 (401)
T COG5441 83 VRFLSSRGDV--AGMIGMGGSGGTALITPAMRRLP 115 (401)
T ss_pred HHHhhcccch--hheeecCCCcchHhhhhHHHhcC
Confidence 5566655544 66788899999999998888887
No 294
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=36.99 E-value=36 Score=31.12 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=22.8
Q ss_pred HHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 131 REYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 131 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
+.+|+ .+-.++|||+|=+.|+.+|.-..
T Consensus 260 ~~~GI--~Pdav~GHSlGE~aAa~aAGvls 287 (538)
T TIGR02816 260 DEFAI--KPDFALGYSKGEASMWASLGVWK 287 (538)
T ss_pred HhcCC--CCCEEeecCHHHHHHHHHhCCCC
Confidence 56778 67799999999999988887553
No 295
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=36.56 E-value=62 Score=20.41 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=21.2
Q ss_pred CceEEEEEcCCC-CChhhHHHHHHHHHhhcCeeEEEE
Q 022700 66 ARFTLLYSHGNA-ADLGQMLELFIELRAHLRVNIMSY 101 (293)
Q Consensus 66 ~~~~vv~~hG~~-~~~~~~~~~~~~~~~~~g~~v~~~ 101 (293)
..|.++++||.. ...+ .+...++.+.|+.++.+
T Consensus 30 ~~~~~~lvhGga~~GaD---~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKGAD---RIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCCCHH---HHHHHHHHHCCCeeEEe
Confidence 347788999976 3333 45555667778766554
No 296
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=36.11 E-value=44 Score=27.53 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.-+++.+.+ .++ ..=.+.|.|+|+.++..+|...
T Consensus 26 iGVL~aLeE-~gi--~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 26 IGILQALEE-AGI--PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHH-cCC--CccEEEEECHHHHHHHHHHcCC
Confidence 445666654 466 4568899999999999998763
No 297
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.05 E-value=65 Score=22.66 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHH
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPT 152 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a 152 (293)
.+....+++....+++ +.++++||+--|.+.
T Consensus 43 ~~~~~sl~~av~~l~v--~~ivV~gHt~CG~v~ 73 (119)
T cd00382 43 LDVLASLEYAVEVLGV--KHIIVCGHTDCGAVK 73 (119)
T ss_pred ccHHHHHHHHHHhhCC--CEEEEEccCCCcHHH
Confidence 4677888898888877 899999997555444
No 298
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=35.03 E-value=59 Score=24.93 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLH 154 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~ 154 (293)
+....++|....+++ +.|+++|||-=|.+...
T Consensus 66 ~~~asleyAv~~L~v--~~IvV~GHs~CGav~a~ 97 (182)
T cd00883 66 NCLSVLQYAVDVLKV--KHIIVCGHYGCGGVKAA 97 (182)
T ss_pred chhhhHHHHHHhcCC--CEEEEecCCCchHHHHH
Confidence 467889999999887 89999999965554443
No 299
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.60 E-value=45 Score=26.27 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.+++.+.+. ++ ..-.+.|.|.|+.++..++...+
T Consensus 15 Gvl~aL~e~-g~--~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEA-GI--EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCc
Confidence 456666554 44 45689999999999999998764
No 300
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.06 E-value=54 Score=24.73 Aligned_cols=35 Identities=26% Similarity=0.236 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..+++.+.++ ++ ..-.+.|.|.|+.++..++...+
T Consensus 16 ~Gvl~~L~e~-g~--~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 16 IGVLRALEEE-GI--EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHHC-CC--CeeEEEEeCHHHHHHHHHHcCCC
Confidence 3456666544 44 45689999999999998887654
No 301
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=34.05 E-value=54 Score=27.49 Aligned_cols=35 Identities=11% Similarity=0.016 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhcCCCc--cEEEEEeccChHHHHHHHH
Q 022700 123 EAVYNCLKREYNVKQE--ELILYGQSVGSGPTLHLAS 157 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~ 157 (293)
..+++.+.++.+.+.. -=.+.|.|.||.+|+.++.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 3445556555432111 1268999999999999875
No 302
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=33.89 E-value=52 Score=24.76 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
..+++++.++ ++ ..-.+.|.|.|+.++..++...
T Consensus 16 ~Gvl~~L~~~-~~--~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEA-GI--PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHc-CC--CeeEEEEECHHHHHHHHHHcCC
Confidence 3456666544 44 4558999999999999988654
No 303
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.21 E-value=2.4e+02 Score=23.79 Aligned_cols=82 Identities=15% Similarity=0.096 Sum_probs=46.2
Q ss_pred HHHHHHhhcCeeEEEEccccccCCCCCCC-----CCchhhhHHHHHHHHHHHhcCCCccE-----EEEEec---------
Q 022700 86 LFIELRAHLRVNIMSYDYSGYGASTGKPS-----EFNTYYDIEAVYNCLKREYNVKQEEL-----ILYGQS--------- 146 (293)
Q Consensus 86 ~~~~~~~~~g~~v~~~d~~g~G~s~~~~~-----~~~~~~d~~~~i~~l~~~~~~~~~~i-----~l~G~S--------- 146 (293)
.+..| .+.||.|+.+|-...|....... ......|-. .++.+.++..++ .-+ ..+|-|
T Consensus 16 tv~~L-l~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~-~L~~vf~~~~id-aViHFAa~~~VgESv~~Pl~Yy~ 92 (329)
T COG1087 16 TVRQL-LKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRA-LLTAVFEENKID-AVVHFAASISVGESVQNPLKYYD 92 (329)
T ss_pred HHHHH-HHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHH-HHHHHHHhcCCC-EEEECccccccchhhhCHHHHHh
Confidence 34455 66899999999876654432111 112223322 344444444432 122 345555
Q ss_pred --cChHHHHHHHHhcCCccEEEEecc
Q 022700 147 --VGSGPTLHLASRLQKLRGVVLHSA 170 (293)
Q Consensus 147 --~Gg~~a~~~a~~~p~v~~~i~~~p 170 (293)
.+|.+.+.-+...-.++.+|+.+.
T Consensus 93 NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 93 NNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred hchHhHHHHHHHHHHhCCCEEEEecc
Confidence 356677766666667999998874
No 304
>PF13728 TraF: F plasmid transfer operon protein
Probab=33.08 E-value=1.1e+02 Score=24.10 Aligned_cols=45 Identities=4% Similarity=0.104 Sum_probs=35.4
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST 110 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~ 110 (293)
....++|.-|....-..+.+.+..+..++|+.|+.++.-|.+...
T Consensus 121 ~~gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 121 KYGLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred CeEEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 346677777766666778899999999999999999988776553
No 305
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=32.59 E-value=1.6e+02 Score=22.99 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=31.7
Q ss_pred ceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHH
Q 022700 67 RFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKR 131 (293)
Q Consensus 67 ~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~ 131 (293)
+..|+++||..... ..+......++.+.|..+-...++|.|.+- ..+.+.++.+|+.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-------CHHHHHHHHHHHhh
Confidence 45799999987654 223344444558888777777777655433 22445555555543
No 306
>COG2312 Erythromycin esterase homolog [General function prediction only]
Probab=32.24 E-value=98 Score=27.01 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=42.2
Q ss_pred HHHHHHHHhhcCeeEEEEcc--c---------cccCCCCCCCC------CchhhhHHHHHHHHHHHhcCCC--ccEEEEE
Q 022700 84 LELFIELRAHLRVNIMSYDY--S---------GYGASTGKPSE------FNTYYDIEAVYNCLKREYNVKQ--EELILYG 144 (293)
Q Consensus 84 ~~~~~~~~~~~g~~v~~~d~--~---------g~G~s~~~~~~------~~~~~d~~~~i~~l~~~~~~~~--~~i~l~G 144 (293)
..++..|..++||.++++.- + -+|..+..... .-..+++.+.++|+++...-.. ..+.++|
T Consensus 65 ~rm~r~Lvee~Gf~~iA~EA~~~d~~av~~Yv~~~~~d~~~~~~~~~~~~Wr~~~v~~lv~wlr~~na~r~~~~~~~f~g 144 (405)
T COG2312 65 ARMFRALVEELGFRAIAFEADFPDAQAVNRYVRGGGDDLREAMDGFIFWVWRRAEVRDLVEWLREFNAARSAGPQVGFYG 144 (405)
T ss_pred HHHHHHHHHHhCcceEEeccCcHHHHHHHHHHhccCCChHHHHhccchhhhhHHHHHHHHHHHHHHhccCCcccccceee
Confidence 45778888899999999852 1 12221111100 1112678888999988764221 4567777
Q ss_pred ec---cChHHHHHHH
Q 022700 145 QS---VGSGPTLHLA 156 (293)
Q Consensus 145 ~S---~Gg~~a~~~a 156 (293)
.. .+|.++...+
T Consensus 145 ~D~~~~n~~~~~~~~ 159 (405)
T COG2312 145 FDAQMENGSAAALRA 159 (405)
T ss_pred ccccccccchHHHHh
Confidence 54 5555554443
No 307
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=31.98 E-value=3.9e+02 Score=24.27 Aligned_cols=103 Identities=15% Similarity=0.236 Sum_probs=55.7
Q ss_pred ccEEEEEeccChHHHHHHHHhc---CCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcCCCcEEEEecCCCCcc
Q 022700 138 EELILYGQSVGSGPTLHLASRL---QKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHVNCPVLVIHGTNDDIV 214 (293)
Q Consensus 138 ~~i~l~G~S~Gg~~a~~~a~~~---p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~ 214 (293)
-+|+..|.-.-..-+..+.... +++.++|+.-+.+..... | ..-++.+++|+|+++-....-+
T Consensus 40 ~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~--------~------i~~~~~l~~PvL~~~~q~~~~l 105 (484)
T cd03557 40 VKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKM--------W------IAGLTALQKPLLHLHTQFNREI 105 (484)
T ss_pred eEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHH--------H------HHHHHHcCCCEEEEccCCCccC
Confidence 3566666555444444444443 458888887654432111 1 2346677899998876642222
Q ss_pred Chhh----------HHH-------HHHHhcCCcceEEecCCCCCCCCCchHHHHHHHHHHHHhh
Q 022700 215 DLSH----------GKR-------LWELSKEKYDPLWVKGGGHCNLETYPEYIKHLRKFINAME 261 (293)
Q Consensus 215 ~~~~----------~~~-------~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~i~~fl~~~~ 261 (293)
|.+. +.. ...+++-. ..++- ||. +.+++.+.|.+|++...
T Consensus 106 ~~~sidmd~m~l~qaahG~~e~~~il~R~gi~--~~~v~--G~~---~d~~~~~~i~~w~raa~ 162 (484)
T cd03557 106 PWDTIDMDFMNLNQSAHGDREFGFIGSRMRIP--RKVVV--GHW---QDPEVHEKIGDWMRAAA 162 (484)
T ss_pred CCCCccchHHhhhhhcCCcHHHHHHHHHcCCC--eeEEE--EeC---CCHHHHHHHHHHHHHHH
Confidence 2221 100 12222322 22222 664 66789999999998644
No 308
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=31.76 E-value=53 Score=27.70 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=21.6
Q ss_pred HHHHHHHhcCCCccEEEEEeccChHHHHHHHH
Q 022700 126 YNCLKREYNVKQEELILYGQSVGSGPTLHLAS 157 (293)
Q Consensus 126 i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 157 (293)
++.+.++.. ..++.++.|||+|=+.|+.++.
T Consensus 74 ~~~l~~~~~-~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGL-GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcC-CCCCceeecccHhHHHHHHHcc
Confidence 334444431 2377899999999998887766
No 309
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=31.59 E-value=91 Score=22.45 Aligned_cols=11 Identities=18% Similarity=0.413 Sum_probs=9.3
Q ss_pred CceEEEEEcCC
Q 022700 66 ARFTLLYSHGN 76 (293)
Q Consensus 66 ~~~~vv~~hG~ 76 (293)
...++||+||-
T Consensus 56 ~y~~viFvHGC 66 (150)
T COG3727 56 KYRCVIFVHGC 66 (150)
T ss_pred CceEEEEEeee
Confidence 56899999994
No 310
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=31.58 E-value=1.5e+02 Score=19.45 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
+...+++-+++.+|. ..|.+.|.+....+|..+....-
T Consensus 28 ~~~~~~~~l~~~LG~--QdV~V~Gip~~sh~ArvLVeADy 65 (84)
T PF07643_consen 28 GPAAWVDGLRQALGP--QDVTVYGIPADSHFARVLVEADY 65 (84)
T ss_pred CHHHHHHHHHHHhCC--ceeEEEccCCccHHHHHHHHhhh
Confidence 355678888888886 89999999999999988876543
No 311
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=31.33 E-value=38 Score=27.61 Aligned_cols=14 Identities=43% Similarity=0.883 Sum_probs=12.0
Q ss_pred CccEEEEEeccChH
Q 022700 137 QEELILYGQSVGSG 150 (293)
Q Consensus 137 ~~~i~l~G~S~Gg~ 150 (293)
...|+++|||+|..
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 37899999999964
No 312
>PHA02114 hypothetical protein
Probab=31.25 E-value=72 Score=21.49 Aligned_cols=35 Identities=11% Similarity=0.128 Sum_probs=26.5
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEc
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d 102 (293)
..+||+=--+..+...|...+..+ .+.||+|++-.
T Consensus 82 ~gtivldvn~amsr~pwi~v~s~l-e~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPWIKVISRL-EEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcHHHHHHHH-HhcCceeeehh
Confidence 356666666777777888888888 88899988754
No 313
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=30.95 E-value=3.7e+02 Score=23.62 Aligned_cols=21 Identities=14% Similarity=-0.021 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHhhcCeeEEEEc
Q 022700 81 GQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 81 ~~~~~~~~~~~~~~g~~v~~~d 102 (293)
......+..+ .+.|+.|+-+.
T Consensus 129 p~~~~Nl~~L-~~~G~~vv~P~ 149 (390)
T TIGR00521 129 PAVQENIKRL-KDDGYIFIEPD 149 (390)
T ss_pred HHHHHHHHHH-HHCCcEEECCC
Confidence 3445667777 66797655443
No 314
>PLN03006 carbonate dehydratase
Probab=30.69 E-value=70 Score=26.77 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCCccEEEEEeccChHHH
Q 022700 122 IEAVYNCLKREYNVKQEELILYGQSVGSGPT 152 (293)
Q Consensus 122 ~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a 152 (293)
....|+|....+++ +.|+++|||-=|.+.
T Consensus 158 ~~aSLEYAV~~L~V--~~IVV~GHs~CGaV~ 186 (301)
T PLN03006 158 TKAALEFSVNTLNV--ENILVIGHSRCGGIQ 186 (301)
T ss_pred hhhhHHHHHHHhCC--CEEEEecCCCchHHH
Confidence 66789999999988 899999999544444
No 315
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=30.51 E-value=2.7e+02 Score=21.85 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=28.4
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhc-CeeEEEEccc
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHL-RVNIMSYDYS 104 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~-g~~v~~~d~~ 104 (293)
+..+.|+++.-.......+...+...+.+. |+.+..++..
T Consensus 29 ~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~ 69 (212)
T cd03146 29 KARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLF 69 (212)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEecc
Confidence 356778888877766656666666666888 9888877754
No 316
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=29.68 E-value=1.5e+02 Score=20.89 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=9.6
Q ss_pred CceEEEEEcCCC
Q 022700 66 ARFTLLYSHGNA 77 (293)
Q Consensus 66 ~~~~vv~~hG~~ 77 (293)
...++||+||-.
T Consensus 55 ~~klaIfVDGcf 66 (117)
T TIGR00632 55 EYRCVIFIHGCF 66 (117)
T ss_pred CCCEEEEEcccc
Confidence 578999999953
No 317
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=29.59 E-value=2.3e+02 Score=21.45 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=38.2
Q ss_pred hhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccC
Q 022700 92 AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVG 148 (293)
Q Consensus 92 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~G 148 (293)
.+.|+..+.+|.-..=- .+.......++.++++.+++.++. +++.++--|.|
T Consensus 37 k~~Gik~li~DkDNTL~---~~~~~~i~~~~~~~~~~l~~~~~~--~~v~IvSNsaG 88 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLT---PPYEDEIPPEYAEWLNELKKQFGK--DRVLIVSNSAG 88 (168)
T ss_pred hhcCceEEEEcCCCCCC---CCCcCcCCHHHHHHHHHHHHHCCC--CeEEEEECCCC
Confidence 78999999999864321 122334457788889989887753 58999999986
No 318
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=29.48 E-value=1.6e+02 Score=22.66 Aligned_cols=53 Identities=17% Similarity=0.376 Sum_probs=34.9
Q ss_pred EEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccc
Q 022700 48 LETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGY 106 (293)
Q Consensus 48 ~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~ 106 (293)
+...+|..+...-+ .+|+|...+...-....+.+..+..++|+.|+.+...+.
T Consensus 58 f~l~dG~~v~lsd~------~lV~FwaswCp~C~~e~P~L~~l~~~~g~~Vi~Vs~D~~ 110 (181)
T PRK13728 58 FRLSNGRQVNLADW------KVVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQ 110 (181)
T ss_pred cCCCCCCEeehhHc------eEEEEECCCCHhHHHHHHHHHHHHHHcCCEEEEEEeCCC
Confidence 34447766543222 166666666655566677788888888999999987644
No 319
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.40 E-value=1.4e+02 Score=23.19 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
.....++|....+++ +.|+++|||-=|.+..
T Consensus 72 ~~~asleyav~~l~v--~~ivV~GH~~Cgav~A 102 (190)
T cd00884 72 GTSAAIEYAVAVLKV--EHIVVCGHSDCGGIRA 102 (190)
T ss_pred chhhhHHHHHHHhCC--CEEEEeCCCcchHHHH
Confidence 467889999999887 8999999995544444
No 320
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=29.27 E-value=1.6e+02 Score=23.46 Aligned_cols=65 Identities=23% Similarity=0.192 Sum_probs=30.6
Q ss_pred CcEEEEecCCC-CccChhhHHHHHHHhcCC-cceEEecCCCCCCCCC-------chHHHHHHHHHHHHhhhcccC
Q 022700 201 CPVLVIHGTND-DIVDLSHGKRLWELSKEK-YDPLWVKGGGHCNLET-------YPEYIKHLRKFINAMEKLSIT 266 (293)
Q Consensus 201 ~P~l~i~g~~D-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~~~~~-------~~~~~~~i~~fl~~~~~~~~~ 266 (293)
.|++++||..+ ....+......+...+-+ .+++-+ +-|...... .-+..++|.+|++++......
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~-tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYAL-TYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA 75 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE---S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT-
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEec-cCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC
Confidence 59999999988 444555544444444322 133333 222221100 123457899999988765433
No 321
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=28.80 E-value=78 Score=26.04 Aligned_cols=34 Identities=12% Similarity=0.092 Sum_probs=24.2
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d 102 (293)
..||++|....+......++..+ .+.||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~L-k~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITII-KEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHH-HHCCCEEEeHH
Confidence 46788897665555556666666 88899887764
No 322
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=28.63 E-value=2e+02 Score=24.04 Aligned_cols=72 Identities=15% Similarity=0.350 Sum_probs=45.2
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEcccc--------ccCCC---CCCCC---CchhhhHHHHHHHHHH
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSG--------YGAST---GKPSE---FNTYYDIEAVYNCLKR 131 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g--------~G~s~---~~~~~---~~~~~d~~~~i~~l~~ 131 (293)
.-|.|+|..|.++. +..+ ...||.|+..|+-= .|..- ++.+. ....+.+.+.++...+
T Consensus 251 ~vPmi~fakG~g~~-------Le~l-~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~ 322 (359)
T KOG2872|consen 251 PVPMILFAKGSGGA-------LEEL-AQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVK 322 (359)
T ss_pred CCceEEEEcCcchH-------HHHH-HhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHH
Confidence 35899999997543 4555 77899999999842 11110 11111 1233667777777777
Q ss_pred HhcCCCccEEEEEec
Q 022700 132 EYNVKQEELILYGQS 146 (293)
Q Consensus 132 ~~~~~~~~i~l~G~S 146 (293)
.+| ....|.=+||.
T Consensus 323 ~fG-~~ryI~NLGHG 336 (359)
T KOG2872|consen 323 DFG-KSRYIANLGHG 336 (359)
T ss_pred HhC-ccceEEecCCC
Confidence 777 44567777775
No 323
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=28.46 E-value=1.3e+02 Score=25.14 Aligned_cols=44 Identities=14% Similarity=0.248 Sum_probs=34.7
Q ss_pred chhhhHHHHHHHHHHHhcCC--CccEEEEEeccChHHHHHHHHhcC
Q 022700 117 NTYYDIEAVYNCLKREYNVK--QEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 117 ~~~~d~~~~i~~l~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.....+..-|+|...+..+. |+++.++|-|.|=.+|.++++.+.
T Consensus 19 GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 19 GCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred cHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 44566777888888776553 578999999999999999888764
No 324
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=28.24 E-value=2e+02 Score=21.75 Aligned_cols=59 Identities=8% Similarity=0.092 Sum_probs=38.8
Q ss_pred CCceeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCCh------hhHHHHHHHHHhhcCeeEEEEc
Q 022700 41 KNMDCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADL------GQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 41 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~------~~~~~~~~~~~~~~g~~v~~~d 102 (293)
..+-.+.+...||..|...-+. +++++|+|+..-.+.. -.|+.....+ ...|+.|+.+.
T Consensus 67 d~iPD~tL~dedg~sisLkkit--~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~-kka~aeV~GlS 131 (211)
T KOG0855|consen 67 DAIPDFTLKDEDGKSISLKKIT--GNKPVVLFFYPAASTPGCTKQACGFRDNYEKF-KKAGAEVIGLS 131 (211)
T ss_pred CcCCCcccccCCCCeeeeeeec--CCCcEEEEEeccCCCCCcccccccccccHHHH-hhcCceEEeec
Confidence 3444566777888888776665 4559999988754332 2355556666 77788887653
No 325
>PLN03019 carbonic anhydrase
Probab=28.19 E-value=1.2e+02 Score=25.83 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
.....|+|....+++ +.|+++|||-=|.+..
T Consensus 200 ~v~aSIEYAV~~L~V--~~IVV~GHs~CGaVkA 230 (330)
T PLN03019 200 GVGAAIEYAVLHLKV--ENIVVIGHSACGGIKG 230 (330)
T ss_pred ccchhHHHHHHHhCC--CEEEEecCCCchHHHH
Confidence 456889999999988 8999999995444443
No 326
>COG3933 Transcriptional antiterminator [Transcription]
Probab=28.14 E-value=4.4e+02 Score=23.61 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=42.5
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhH-HHHHHHHHHHhcCCCccEEEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDI-EAVYNCLKREYNVKQEELILY 143 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~-~~~i~~l~~~~~~~~~~i~l~ 143 (293)
+.-.+||+.||.. ++.++...+.+++.+ +. +.++|+|- .....|+ .++.+++.+. +..+=.++
T Consensus 107 ~~v~vIiiAHG~s-TASSmaevanrLL~~-~~-~~aiDMPL----------dvsp~~vle~l~e~~k~~---~~~~Glll 170 (470)
T COG3933 107 PRVKVIIIAHGYS-TASSMAEVANRLLGE-EI-FIAIDMPL----------DVSPSDVLEKLKEYLKER---DYRSGLLL 170 (470)
T ss_pred CceeEEEEecCcc-hHHHHHHHHHHHhhc-cc-eeeecCCC----------cCCHHHHHHHHHHHHHhc---CccCceEE
Confidence 3457899999975 445667777888444 33 78999981 1122333 3334444433 22332333
Q ss_pred EeccChHHHHHH
Q 022700 144 GQSVGSGPTLHL 155 (293)
Q Consensus 144 G~S~Gg~~a~~~ 155 (293)
=-.||...++.=
T Consensus 171 LVDMGSL~~f~~ 182 (470)
T COG3933 171 LVDMGSLTSFGS 182 (470)
T ss_pred EEecchHHHHHH
Confidence 347887776653
No 327
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=28.07 E-value=49 Score=28.54 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=32.6
Q ss_pred ccCCCCceeEEEEccCCCEEEEEEEeCCC----------CceEEEEEcCCCCC
Q 022700 37 VTADKNMDCHLLETKNGNKIVATFWRHPF----------ARFTLLYSHGNAAD 79 (293)
Q Consensus 37 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~----------~~~~vv~~hG~~~~ 79 (293)
..+..++|..+-...||.++-+.-+.+++ ++|+|+++|-+.+.
T Consensus 445 vL~q~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 445 VLWQHPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred hhhhChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 34567888888889999888777776442 68999999987543
No 328
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=27.70 E-value=1e+02 Score=25.37 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=28.0
Q ss_pred CceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccc
Q 022700 66 ARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
..|+||++.|+.+++ .....++..+ ..+|+.|.++.-|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~l-DPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGV-NPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhc-CCCeeEEEeCCCC
Confidence 469999999987665 3334555555 8899999988655
No 329
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=27.30 E-value=91 Score=25.24 Aligned_cols=37 Identities=24% Similarity=0.172 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.-+++.+.++-. ....-.+.|-|.|+.+|..++...+
T Consensus 16 ~GVl~aL~e~g~-~~~~d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 16 VGVAVCLKKYAP-HLLLNKISGASAGALAACCLLCDLP 52 (245)
T ss_pred HHHHHHHHHhCc-ccCCCeEEEEcHHHHHHHHHHhCCc
Confidence 345666766531 1112249999999999999887644
No 330
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=27.13 E-value=94 Score=21.35 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=22.4
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEcc
Q 022700 70 LLYSHGNAADLGQMLELFIELRAHLRVNIMSYDY 103 (293)
Q Consensus 70 vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~ 103 (293)
+|++.|..+++.. .+...++...|+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888777654 3445554556999988887
No 331
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=26.92 E-value=85 Score=25.98 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=24.6
Q ss_pred EEEEEcCCCCChhhHHHHHHHHHhhcCe-------eEEEEccccc
Q 022700 69 TLLYSHGNAADLGQMLELFIELRAHLRV-------NIMSYDYSGY 106 (293)
Q Consensus 69 ~vv~~hG~~~~~~~~~~~~~~~~~~~g~-------~v~~~d~~g~ 106 (293)
.-|++.|.|...-....++...+.+.|. +++.+|..|.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gl 70 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGL 70 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCe
Confidence 3456667766655555555444455676 7899999884
No 332
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.71 E-value=91 Score=22.70 Aligned_cols=38 Identities=11% Similarity=-0.033 Sum_probs=24.0
Q ss_pred CceEEEEEcCCCCChhh----HH--HHHHHHHhhcCeeEEEEccc
Q 022700 66 ARFTLLYSHGNAADLGQ----ML--ELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~----~~--~~~~~~~~~~g~~v~~~d~~ 104 (293)
+.-.|+|.||+..+.-. |. ......+.+.|| .+++|-|
T Consensus 41 pyhri~FA~GfYaSalHEIaHWcvAGk~Rr~l~DFGY-WY~PDGR 84 (180)
T COG3101 41 PYHRIVFAHGFYASALHEISHWCIAGKARRELVDFGY-WYCPDGR 84 (180)
T ss_pred CceeEEEechhHHHHHHHHHHHHHccHHHhhhhccCe-eeCCCCc
Confidence 45689999998776522 21 112333467787 7888866
No 333
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=26.70 E-value=1.7e+02 Score=25.18 Aligned_cols=37 Identities=8% Similarity=0.075 Sum_probs=26.7
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccC
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGA 108 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~ 108 (293)
..+|+.+.|+-.+ ...+.++.+.||.|+.+.+.-+..
T Consensus 4 ~kV~v~mSGGVDS-----SVaA~lLk~QGyeViGl~m~~~~~ 40 (356)
T COG0482 4 KKVLVGMSGGVDS-----SVAAYLLKEQGYEVIGLFMKNWDE 40 (356)
T ss_pred cEEEEEccCCHHH-----HHHHHHHHHcCCeEEEEEEEeecc
Confidence 4566777765443 456777789999999998887664
No 334
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.62 E-value=63 Score=28.60 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 160 (293)
..+++.+.++ ++ .+-++.|.|.|+.+|..++...+
T Consensus 89 iGVLkaL~E~-gl--~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 89 IGVLKALFEA-NL--LPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHHc-CC--CCCEEEEECHHHHHHHHHHcCCH
Confidence 3456666544 45 34589999999999999887543
No 335
>PLN00416 carbonate dehydratase
Probab=26.25 E-value=98 Score=25.33 Aligned_cols=31 Identities=19% Similarity=0.251 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
.....|+|....+++ +.|+++|||-=|.+..
T Consensus 125 ~~~asLEyAv~~L~V--~~IVV~GHs~CGaV~A 155 (258)
T PLN00416 125 GVGAAVEYAVVHLKV--ENILVIGHSCCGGIKG 155 (258)
T ss_pred cchhHHHHHHHHhCC--CEEEEecCCCchHHHH
Confidence 466789999999988 8999999995444433
No 336
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.17 E-value=78 Score=28.60 Aligned_cols=53 Identities=15% Similarity=0.228 Sum_probs=31.5
Q ss_pred hhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccE-----EEEEeccChHHHHHHHHh
Q 022700 92 AHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEEL-----ILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 92 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i-----~l~G~S~Gg~~a~~~a~~ 158 (293)
...|.+++.+|-=| ... . -..++++.+.+. ..++| .++|.|.||.+|..+...
T Consensus 413 kg~G~rILSiDGGG--trG-~--------~~lqiL~kiekl---sgKpIheLFD~ICGvSTG~ilA~~Lg~k 470 (763)
T KOG4231|consen 413 KGQGLRILSIDGGG--TRG-L--------ATLQILKKIEKL---SGKPIHELFDLICGVSTGGILAIALGVK 470 (763)
T ss_pred CCCceEEEEecCCC--ccc-h--------hHHHHHHHHHHh---cCCcHHHHHHHHhccCchHHHHHHHHhc
Confidence 45688888888432 211 0 122333333332 22444 689999999999988765
No 337
>PLN03014 carbonic anhydrase
Probab=25.98 E-value=87 Score=26.74 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEecc-ChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSV-GSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~-Gg~~a~ 153 (293)
+....|+|....+++ +.|+++|||- ||.-|+
T Consensus 205 ~v~asLEYAV~~L~V--~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 205 GVGAAIEYAVLHLKV--ENIVVIGHSACGGIKGL 236 (347)
T ss_pred cchhHHHHHHHHhCC--CEEEEeCCCCchHHHHH
Confidence 467899999999987 8999999995 444443
No 338
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=25.66 E-value=73 Score=24.38 Aligned_cols=34 Identities=6% Similarity=0.135 Sum_probs=20.7
Q ss_pred eEEEEEcCCC---CChhhHHHHHHHHHhhcCeeEEEEc
Q 022700 68 FTLLYSHGNA---ADLGQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 68 ~~vv~~hG~~---~~~~~~~~~~~~~~~~~g~~v~~~d 102 (293)
..||++|... .+......++..+ .+.||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l-~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKL-KEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHH-HHCCCEEEEHH
Confidence 3588899422 2233444555555 78899887764
No 339
>PRK15219 carbonic anhydrase; Provisional
Probab=25.65 E-value=1.1e+02 Score=24.84 Aligned_cols=31 Identities=6% Similarity=0.041 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
++...++|....+++ +.|+++|||-=|.+..
T Consensus 128 ~~~~slEyAv~~L~v--~~IvVlGHt~CGav~A 158 (245)
T PRK15219 128 DLLGSMEFACAVAGA--KVVLVMGHTACGAVKG 158 (245)
T ss_pred chhhHHHHHHHHcCC--CEEEEecCCcchHHHH
Confidence 456789999999987 8999999995444443
No 340
>PF01581 FARP: FMRFamide related peptide family; InterPro: IPR002544 The neuropeptide Phe-Met-Arg-Phe-NH2 (FMRFamide) is a potent cardioactive neuropeptide in Lymnaea stagnalis []. FMRFamide (Phe-Met-Arg-Phe-NH2) was first demonstrated to be cardioactive in several molluscan species. FMRFamide is now known to be cardioexcitatory in mammals, to inhibit morphine-induced antinociception, and to block morphine-, defeat-, and deprivation-induced feeding []. Thirteen neuropeptides varying in length from 7 to 11 residues and ending C-terminally in -Phe-Met-Arg-Phe-NH2 (calliFMRFamides 1-13) and one dodecapeptide ending in -Met-Ile-Arg-Phe-NH2 (calliMIRFamide 1) have been isolated from thoracic ganglia of the blowfly Calliphora vomitoria. Results indicate that the N terminus (in addition to the C terminus as previously found for FMRFamides of other organisms) is crucial for at least some biological activities [].; GO: 0007218 neuropeptide signaling pathway
Probab=25.62 E-value=35 Score=12.86 Aligned_cols=8 Identities=50% Similarity=1.149 Sum_probs=5.2
Q ss_pred cccccccC
Q 022700 285 NKCLRFGK 292 (293)
Q Consensus 285 ~~~~~~~~ 292 (293)
+.-.|||+
T Consensus 4 ~~~~RFGr 11 (11)
T PF01581_consen 4 NNFMRFGR 11 (11)
T ss_pred ccccccCC
Confidence 34578885
No 341
>TIGR03586 PseI pseudaminic acid synthase.
Probab=25.49 E-value=4.3e+02 Score=22.58 Aligned_cols=81 Identities=15% Similarity=0.171 Sum_probs=48.4
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCe-eEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRV-NIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYG 144 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G 144 (293)
.+.+|++--|. ++...+...+..+ .+.|. .++.... .|. .+..... -+ ...+..+++.+++ +|++..
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i-~~~g~~~i~LlhC----~s~-YP~~~~~-~n-L~~i~~lk~~f~~---pVG~SD 200 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEAC-REAGCKDLVLLKC----TSS-YPAPLED-AN-LRTIPDLAERFNV---PVGLSD 200 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHH-HHCCCCcEEEEec----CCC-CCCCccc-CC-HHHHHHHHHHhCC---CEEeeC
Confidence 45667777787 5778888888887 55665 3444431 222 1211111 12 2346677777753 888999
Q ss_pred eccChHHHHHHHHh
Q 022700 145 QSVGSGPTLHLASR 158 (293)
Q Consensus 145 ~S~Gg~~a~~~a~~ 158 (293)
|+.|-.+++.+.+.
T Consensus 201 Ht~G~~~~~aAva~ 214 (327)
T TIGR03586 201 HTLGILAPVAAVAL 214 (327)
T ss_pred CCCchHHHHHHHHc
Confidence 99996555554443
No 342
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI. The protein product of the thiI gene is required for the synthesis of the thiazole moiety in thiamine biosynthesis. It also acts in the generation of 4-thiouridine in tRNA, and may occur in species (such as Mycoplasma genitalium) that lack de novo thiamine biosynthesis.
Probab=25.47 E-value=4.1e+02 Score=23.05 Aligned_cols=54 Identities=7% Similarity=0.011 Sum_probs=31.9
Q ss_pred EEEEccC-CCEEEEEEEeCCC------CceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccc
Q 022700 46 HLLETKN-GNKIVATFWRHPF------ARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 46 ~~~~~~~-g~~l~~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
+.+...+ +.-++...++..+ .+.+++++.|+-.+ ..+..++.+.|+.|+++.+.
T Consensus 145 i~vei~~~~ayi~~~~~~g~gGlP~g~~~kvlvllSGGiDS-----~vaa~ll~krG~~V~av~~~ 205 (371)
T TIGR00342 145 VHIEIREDEFLIITERYEGIGGLPVGTQGKVLALLSGGIDS-----PVAAFMMMKRGCRVVAVHFF 205 (371)
T ss_pred EEEEEECCEEEEEEEeEecCCCcCcCcCCeEEEEecCCchH-----HHHHHHHHHcCCeEEEEEEe
Confidence 3444333 3445444454443 46889999987665 34455556678888766554
No 343
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=25.30 E-value=4e+02 Score=22.18 Aligned_cols=94 Identities=15% Similarity=0.220 Sum_probs=47.4
Q ss_pred EEcCCCCChhhHHHHHHHHHhhcCeeEEEE------ccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 72 YSHGNAADLGQMLELFIELRAHLRVNIMSY------DYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 72 ~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~------d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
.+||.-++...- -.+ ...|+.|.++ +++|+|...+..... +++.++++-+.+.-.+..=..++-|+
T Consensus 10 Vv~G~vGn~AA~----f~l-q~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~---e~l~~~l~~l~~~~~~~~~davltGY 81 (281)
T COG2240 10 VVYGSVGNSAAI----FPL-QRLGLDVWAVPTVQFSNHTGYGKWTGIVMPP---EQLADLLNGLEAIDKLGECDAVLTGY 81 (281)
T ss_pred EeecccccHhHH----HHH-HHcCCceeeeceEEecCCCCCCCCCCcCCCH---HHHHHHHHHHHhcccccccCEEEEcc
Confidence 356666664322 222 6678776654 678888766544444 34444444444311111124566665
Q ss_pred ccChHHHHHHHH-----hcCCccEEEEecchhh
Q 022700 146 SVGSGPTLHLAS-----RLQKLRGVVLHSAILS 173 (293)
Q Consensus 146 S~Gg~~a~~~a~-----~~p~v~~~i~~~p~~~ 173 (293)
=-.+..+..++. +..+.+.++++.|+..
T Consensus 82 lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMG 114 (281)
T COG2240 82 LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMG 114 (281)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCeEEEeCCccc
Confidence 333333222221 2234567888888654
No 344
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=24.75 E-value=2.5e+02 Score=21.47 Aligned_cols=65 Identities=22% Similarity=0.256 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 83 MLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 83 ~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
...+.......-|+.+.++.|.|. .---+..+++|+-.. ....+++.+++.|.|+.-+..+....
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s-----------~pg~lKnaiD~l~~~-~~~~Kpv~~~~~s~g~~~~~~a~~~L 122 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS-----------YPGALKNAIDWLSRE-ALGGKPVLLLGTSGGGAGGLRAQNQL 122 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC-----------CCHHHHHHHHhCCHh-HhCCCcEEEEecCCCchhHHHHHHHH
Confidence 344555554556666666666421 112356667777555 23457899999998888777665543
No 345
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.55 E-value=1.3e+02 Score=23.83 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=23.5
Q ss_pred ceEEEEEcCCC-CChhhHHHHHHHHHhhcCeeEEEEc
Q 022700 67 RFTLLYSHGNA-ADLGQMLELFIELRAHLRVNIMSYD 102 (293)
Q Consensus 67 ~~~vv~~hG~~-~~~~~~~~~~~~~~~~~g~~v~~~d 102 (293)
...||++|... .+.+....++..+ .+.||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~l-k~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDL-KEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHH-HHCCCEEEEhH
Confidence 34688889753 3344555566666 88899888764
No 346
>PLN02154 carbonic anhydrase
Probab=24.16 E-value=1.2e+02 Score=25.27 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
...+.++|....+++ +.|+++|||-=|.+..
T Consensus 151 ~~~aslEyAv~~L~v--~~IvV~GHs~CGAV~A 181 (290)
T PLN02154 151 ETNSALEFAVTTLQV--ENIIVMGHSNCGGIAA 181 (290)
T ss_pred chhhHHHHHHHHhCC--CEEEEecCCCchHHHH
Confidence 366789999999887 8999999995444444
No 347
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=23.89 E-value=1.2e+02 Score=24.29 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=27.9
Q ss_pred CceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccc
Q 022700 66 ARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
..|+||++.|..+.+ +....++..+ ...|+.|.++.-|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~l-DPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHL-NPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhc-CCCeeEEEeCCCC
Confidence 469999999987665 3334555555 8889999988765
No 348
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=23.88 E-value=1.2e+02 Score=22.82 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
++..+++.+.+...+.+..+.++|-|.
T Consensus 2 q~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 2 QLRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp -HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 466778888888888888999999993
No 349
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=23.86 E-value=82 Score=22.03 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=23.8
Q ss_pred cEEEEE-eccChHHHHHHHHhcCCccEEEEec
Q 022700 139 ELILYG-QSVGSGPTLHLASRLQKLRGVVLHS 169 (293)
Q Consensus 139 ~i~l~G-~S~Gg~~a~~~a~~~p~v~~~i~~~ 169 (293)
+|.|+| ..+.|.-.+.+...+|.+.-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeee
Confidence 578999 8888888888888899766555444
No 350
>PF08253 Leader_Erm: Erm Leader peptide ; InterPro: IPR013204 These short proteins are leader peptides (15-19 amino acids) of erm genes that code for resistance determinants in Staphylococcus aureus [].
Probab=23.79 E-value=54 Score=14.47 Aligned_cols=17 Identities=24% Similarity=0.419 Sum_probs=10.6
Q ss_pred CCceeecccccccccCC
Q 022700 1 MGIVTSSVAAKFAFFPP 17 (293)
Q Consensus 1 ~~~~~~~~~~~~~~~p~ 17 (293)
|+..+-+...++.+.|-
T Consensus 1 MG~fSiFVI~~vhYqpN 17 (19)
T PF08253_consen 1 MGMFSIFVINTVHYQPN 17 (19)
T ss_pred CceEEEEEEEeeccCCC
Confidence 55566666677766653
No 351
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=22.95 E-value=1.8e+02 Score=21.29 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=24.9
Q ss_pred hhhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHH
Q 022700 119 YYDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLH 154 (293)
Q Consensus 119 ~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~ 154 (293)
..+....++|....+++ +.|+++||+-=|.+...
T Consensus 38 ~~~~~~sle~av~~l~v--~~IiV~gHt~CGa~~~~ 71 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGV--KEIIVCGHTDCGAIKAA 71 (153)
T ss_dssp -HHHHHHHHHHHHTST---SEEEEEEETT-HHHHHH
T ss_pred ccchhhheeeeeecCCC--CEEEEEcCCCchHHHHH
Confidence 35678888999888877 89999999965555533
No 352
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=22.59 E-value=1.5e+02 Score=22.33 Aligned_cols=27 Identities=30% Similarity=0.436 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
++..+++.+.+...+....+.++|-|.
T Consensus 2 ~~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASNLKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 456778888888888888999999993
No 353
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=22.54 E-value=4.3e+02 Score=23.26 Aligned_cols=51 Identities=10% Similarity=0.168 Sum_probs=35.0
Q ss_pred CeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEeccCh
Q 022700 95 RVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQSVGS 149 (293)
Q Consensus 95 g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg 149 (293)
-|.++.+|-|.++++.... .....|...++..+.+.+ .++-++++-.+.+.
T Consensus 290 ~fDlIilDPPsF~r~k~~~--~~~~rdy~~l~~~~~~iL--~pgG~l~~~s~~~~ 340 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE--FSAQRDYKDLNDLALRLL--APGGTLVTSSCSRH 340 (393)
T ss_pred cccEEEECCcccccCcccc--hhHHHHHHHHHHHHHHHc--CCCCEEEEEecCCc
Confidence 4999999999999887332 455677777787777766 34555555544443
No 354
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.53 E-value=93 Score=26.07 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=23.5
Q ss_pred HHHHHHHHhcCCCccEEEEEeccChHHHHHHHHh
Q 022700 125 VYNCLKREYNVKQEELILYGQSVGSGPTLHLASR 158 (293)
Q Consensus 125 ~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 158 (293)
+++.|.+ .++ ..-.+.|.|+|+.++..+|..
T Consensus 29 Vl~aL~e-~gi--~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEE-AGI--PIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHH-cCC--CccEEEecCHHHHHHHHHHcC
Confidence 4554543 345 677999999999999999884
No 355
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.47 E-value=1.3e+02 Score=21.98 Aligned_cols=25 Identities=12% Similarity=-0.002 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
+....+.+....+++ +.|+++||+-
T Consensus 41 ~~~~sl~~av~~l~~--~~IiV~gHt~ 65 (142)
T cd03379 41 DAIRSLVVSVYLLGT--REIIVIHHTD 65 (142)
T ss_pred hHHHHHHHHHHHhCC--CEEEEEeecC
Confidence 566778888888877 8999999984
No 356
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=22.22 E-value=4.8e+02 Score=22.02 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=23.0
Q ss_pred CCCCChhhHHHHHHHHHhhcCeeEE-EEccccccC
Q 022700 75 GNAADLGQMLELFIELRAHLRVNIM-SYDYSGYGA 108 (293)
Q Consensus 75 G~~~~~~~~~~~~~~~~~~~g~~v~-~~d~~g~G~ 108 (293)
|..-+...+..+++.- +.+|+.|+ -+|.|||-.
T Consensus 62 ~~~yT~~di~elv~yA-~~rgI~vIPEId~PGH~~ 95 (311)
T cd06570 62 GLYYTQEQIREVVAYA-RDRGIRVVPEIDVPGHAS 95 (311)
T ss_pred CCccCHHHHHHHHHHH-HHcCCEEEEeecCccchH
Confidence 3345666777766655 88998765 679999853
No 357
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=22.17 E-value=3.4e+02 Score=22.33 Aligned_cols=130 Identities=12% Similarity=0.060 Sum_probs=70.1
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCee-EEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEEEEe
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVN-IMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELILYGQ 145 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~ 145 (293)
.|.++|..-+.-.......++... ++.|+. ++.+|+| . + ....+....+++++ +.|.++.-
T Consensus 95 ~Pivlm~Y~Npi~~~Gie~F~~~~-~~~GvdGlivpDLP--------~------e-e~~~~~~~~~~~gi--~~I~lvaP 156 (265)
T COG0159 95 VPIVLMTYYNPIFNYGIEKFLRRA-KEAGVDGLLVPDLP--------P------E-ESDELLKAAEKHGI--DPIFLVAP 156 (265)
T ss_pred CCEEEEEeccHHHHhhHHHHHHHH-HHcCCCEEEeCCCC--------h------H-HHHHHHHHHHHcCC--cEEEEeCC
Confidence 477777766554444444455555 666654 7888988 1 1 12223334446777 78888876
Q ss_pred ccChHHHHHHHHhcCCccEEEEecchhhhhhhccchhhhhhhhcccChhhhhcC-CCcEEEEecCCCCccChhhHHHHHH
Q 022700 146 SVGSGPTLHLASRLQKLRGVVLHSAILSGIRVLYPVKMTLWFDIYKNIDKIRHV-NCPVLVIHGTNDDIVDLSHGKRLWE 224 (293)
Q Consensus 146 S~Gg~~a~~~a~~~p~v~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~l~i~g~~D~~~~~~~~~~~~~ 224 (293)
+..--..-.++.....+--++...+.+..-...... .. .....+++. ..|+++=.|-.+ +++++++.+
T Consensus 157 tt~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~----~~---~~v~~vr~~~~~Pv~vGFGIs~----~e~~~~v~~ 225 (265)
T COG0159 157 TTPDERLKKIAEAASGFIYYVSRMGVTGARNPVSAD----VK---ELVKRVRKYTDVPVLVGFGISS----PEQAAQVAE 225 (265)
T ss_pred CCCHHHHHHHHHhCCCcEEEEecccccCCCcccchh----HH---HHHHHHHHhcCCCeEEecCcCC----HHHHHHHHH
Confidence 665544444444444444444444444321111100 11 112333332 679999888765 567777766
Q ss_pred H
Q 022700 225 L 225 (293)
Q Consensus 225 ~ 225 (293)
.
T Consensus 226 ~ 226 (265)
T COG0159 226 A 226 (265)
T ss_pred h
Confidence 6
No 358
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=22.11 E-value=2.3e+02 Score=23.03 Aligned_cols=43 Identities=12% Similarity=0.225 Sum_probs=32.2
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCC
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAS 109 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s 109 (293)
...++|.-|-...-..+.+.+..+..++|+.|+.+..-|.|..
T Consensus 145 ~GL~fFy~s~Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p 187 (248)
T PRK13703 145 YGLMFFYRGQDPIDGQLAQVINDFRDTYGLSVIPVSVDGVINP 187 (248)
T ss_pred ceEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCC
Confidence 3555555555555577888999999999999998888776643
No 359
>PRK10437 carbonic anhydrase; Provisional
Probab=22.04 E-value=1.4e+02 Score=23.70 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHhcCCCccEEEEEeccChHHHH
Q 022700 121 DIEAVYNCLKREYNVKQEELILYGQSVGSGPTL 153 (293)
Q Consensus 121 d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~ 153 (293)
+....++|....+++ +.|+++||+-=|.+..
T Consensus 76 ~~~~~leyAV~~L~v--~~IvV~GHt~CG~V~A 106 (220)
T PRK10437 76 NCLSVVQYAVDVLEV--EHIIICGHYGCGGVQA 106 (220)
T ss_pred chHHHHHHHHHHcCC--CEEEEeCCCCchHHHH
Confidence 467788999888887 8999999995444444
No 360
>COG0400 Predicted esterase [General function prediction only]
Probab=21.74 E-value=4e+02 Score=20.94 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=34.7
Q ss_pred CceEEEEEcCCCCCh--hhHHHHHHHHHhhcCeeEEEEccc-cccCCCCCCCCCchhhhHHHHHHHHHH
Q 022700 66 ARFTLLYSHGNAADL--GQMLELFIELRAHLRVNIMSYDYS-GYGASTGKPSEFNTYYDIEAVYNCLKR 131 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~--~~~~~~~~~~~~~~g~~v~~~d~~-g~G~s~~~~~~~~~~~d~~~~i~~l~~ 131 (293)
+...|+++||.-... ......+...+.+.|..|-.-++. ||.- ..+++.++..|+.+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i---------~~e~~~~~~~wl~~ 204 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEI---------PPEELEAARSWLAN 204 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcC---------CHHHHHHHHHHHHh
Confidence 467899999976542 333344444447789888888776 3322 22455555556543
No 361
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=21.49 E-value=1.3e+02 Score=24.32 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhcCCCcc--EEEEEeccChHHHHHHHHhcC
Q 022700 123 EAVYNCLKREYNVKQEE--LILYGQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~--i~l~G~S~Gg~~a~~~a~~~p 160 (293)
.-+++.+.++ ++...+ -.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 15 VGVASALREH-APRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHHHc-CcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 3456666554 332112 389999999999999888654
No 362
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.49 E-value=91 Score=27.48 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 123 EAVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 123 ~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
..+++.+.++ ++ .+-++.|.|.|+.+|..++...
T Consensus 83 ~GVlkaL~e~-gl--lp~iI~GtSAGAivaalla~~t 116 (407)
T cd07232 83 FGVVKALLDA-DL--LPNVISGTSGGSLVAALLCTRT 116 (407)
T ss_pred HHHHHHHHhC-CC--CCCEEEEECHHHHHHHHHHcCC
Confidence 4566666655 44 4557999999999999998853
No 363
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=21.42 E-value=2.4e+02 Score=23.09 Aligned_cols=44 Identities=7% Similarity=0.114 Sum_probs=32.2
Q ss_pred ceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCC
Q 022700 67 RFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGAST 110 (293)
Q Consensus 67 ~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~ 110 (293)
...++|.-|-......+.+.+..+..++|+.|+.++.-|.+...
T Consensus 152 ~gL~fFy~~~C~~C~~~apil~~fa~~ygi~v~~VS~DG~~~p~ 195 (256)
T TIGR02739 152 YGLFFFYRGKSPISQKMAPVIQAFAKEYGISVIPISVDGTLIPG 195 (256)
T ss_pred eeEEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 35555565555555667788899989999999999888766443
No 364
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=21.37 E-value=5.2e+02 Score=22.09 Aligned_cols=81 Identities=14% Similarity=0.178 Sum_probs=47.6
Q ss_pred CceEEEEEcCCCCChhhHHHHHHHHHhhcCee---EEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCCCccEEE
Q 022700 66 ARFTLLYSHGNAADLGQMLELFIELRAHLRVN---IMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVKQEELIL 142 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l 142 (293)
.+.+||+--|. ++...+...+..+ .+.|.. ++.+..- |. .+..... -+ ...+..+++.+++ +|++
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i-~~~G~~~~~i~llhC~----s~-YP~~~~~-~n-L~~I~~Lk~~f~~---pVG~ 199 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVL-RDAGTPDSNITLLHCT----TE-YPAPFED-VN-LNAMDTLKEAFDL---PVGY 199 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHH-HHcCCCcCcEEEEEEC----CC-CCCCccc-CC-HHHHHHHHHHhCC---CEEE
Confidence 45567777787 5778888888777 556642 3333211 11 1111111 11 3446678777753 8899
Q ss_pred EEeccChHHHHHHHHh
Q 022700 143 YGQSVGSGPTLHLASR 158 (293)
Q Consensus 143 ~G~S~Gg~~a~~~a~~ 158 (293)
-+|+.|-.++..+.+.
T Consensus 200 SdHt~G~~~~~aAval 215 (329)
T TIGR03569 200 SDHTLGIEAPIAAVAL 215 (329)
T ss_pred CCCCccHHHHHHHHHc
Confidence 9999997666554444
No 365
>COG0218 Predicted GTPase [General function prediction only]
Probab=21.28 E-value=1.4e+02 Score=23.38 Aligned_cols=64 Identities=16% Similarity=0.204 Sum_probs=35.8
Q ss_pred hhhhhcCCCcEEEEecCCCCccChhhHH---HHHHHhcC--Ccc--eEEecCCCCCCCCCchHHHHHHHHHHHH
Q 022700 193 IDKIRHVNCPVLVIHGTNDDIVDLSHGK---RLWELSKE--KYD--PLWVKGGGHCNLETYPEYIKHLRKFINA 259 (293)
Q Consensus 193 ~~~l~~i~~P~l~i~g~~D~~~~~~~~~---~~~~~~~~--~~~--~~~~~~~~H~~~~~~~~~~~~i~~fl~~ 259 (293)
.+.+....+|++++...-|.+-..+..+ ...+.+.. ... +..++...... -++..+.|.+|+..
T Consensus 128 ~~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G---i~~l~~~i~~~~~~ 198 (200)
T COG0218 128 IEFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG---IDELKAKILEWLKE 198 (200)
T ss_pred HHHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC---HHHHHHHHHHHhhc
Confidence 4556677899999999999986544432 33333322 111 33333322211 24566777777653
No 366
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=21.27 E-value=1e+02 Score=26.95 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCCccEEEEEeccChHHHHHHHHhc
Q 022700 124 AVYNCLKREYNVKQEELILYGQSVGSGPTLHLASRL 159 (293)
Q Consensus 124 ~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 159 (293)
.+++.+.++ ++ .+-++.|-|.|+.+|..++...
T Consensus 100 Gv~kaL~e~-gl--~p~~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 100 GVVKALWLR-GL--LPRIITGTATGALIAALVGVHT 132 (391)
T ss_pred HHHHHHHHc-CC--CCceEEEecHHHHHHHHHHcCC
Confidence 455555543 45 4557999999999999999853
No 367
>PRK13690 hypothetical protein; Provisional
Probab=21.00 E-value=1.7e+02 Score=22.30 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=24.9
Q ss_pred hhhhHHHHHHHHHHHhcCCCccEEEEEecc
Q 022700 118 TYYDIEAVYNCLKREYNVKQEELILYGQSV 147 (293)
Q Consensus 118 ~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~ 147 (293)
..+++..+++.+.+..++.+..+.++|-|.
T Consensus 6 i~~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 6 IKKQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 346778888888888888888999999993
No 368
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=21.00 E-value=5.7e+02 Score=22.88 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHH
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGP 151 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~ 151 (293)
+++.+..+.+........+++.+++.|-|..+
T Consensus 278 ~el~~~~~~l~~~~~~~g~rvaivs~sGG~g~ 309 (447)
T TIGR02717 278 EELFDLARLLSNQPLPKGNRVAIITNAGGPGV 309 (447)
T ss_pred HHHHHHHHHHhcCCCCCCCeEEEEECCchHHH
Confidence 33444444333222223468999988855433
No 369
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=20.66 E-value=3.3e+02 Score=23.38 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=22.2
Q ss_pred CChhhHHHHHHHHHhhcCeeEE-EEccccccCC
Q 022700 78 ADLGQMLELFIELRAHLRVNIM-SYDYSGYGAS 109 (293)
Q Consensus 78 ~~~~~~~~~~~~~~~~~g~~v~-~~d~~g~G~s 109 (293)
-+.+.+..++... +++|+.|+ -+|.|||-.+
T Consensus 67 YT~~di~eiv~yA-~~rgI~vIPEID~PGH~~a 98 (348)
T cd06562 67 YTPEDVKEIVEYA-RLRGIRVIPEIDTPGHTGS 98 (348)
T ss_pred ECHHHHHHHHHHH-HHcCCEEEEeccCchhhHH
Confidence 3556667766665 88998865 6799998643
No 370
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=20.65 E-value=2.9e+02 Score=18.82 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=32.0
Q ss_pred ceeEEEEccCCCEEEEEEEeCCCCceEEEEEcCCCCChhh------HHHHHHHHHhhcCeeEEEEcc
Q 022700 43 MDCHLLETKNGNKIVATFWRHPFARFTLLYSHGNAADLGQ------MLELFIELRAHLRVNIMSYDY 103 (293)
Q Consensus 43 ~~~~~~~~~~g~~l~~~~~~~~~~~~~vv~~hG~~~~~~~------~~~~~~~~~~~~g~~v~~~d~ 103 (293)
+..+.+++.+|..+...-+ ..+++||++-....+... +......+ .+.|+.++.+..
T Consensus 5 ~P~f~l~~~~g~~~~l~~l---~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~-~~~~~~vi~is~ 67 (124)
T PF00578_consen 5 APDFTLTDSDGKTVSLSDL---KGKPVVLFFWPTAWCPFCQAELPELNELYKKY-KDKGVQVIGIST 67 (124)
T ss_dssp GGCEEEETTTSEEEEGGGG---TTSEEEEEEESTTTSHHHHHHHHHHHHHHHHH-HTTTEEEEEEES
T ss_pred CCCcEeECCCCCEEEHHHH---CCCcEEEEEeCccCccccccchhHHHHHhhhh-ccceEEeeeccc
Confidence 4456677777776643222 347777777665333322 22233333 566888888864
No 371
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=20.63 E-value=4.2e+02 Score=22.34 Aligned_cols=33 Identities=3% Similarity=0.077 Sum_probs=20.0
Q ss_pred eEEEEEcCCCCChhhHHHHHHHHHhh-cCeeEEEEcc
Q 022700 68 FTLLYSHGNAADLGQMLELFIELRAH-LRVNIMSYDY 103 (293)
Q Consensus 68 ~~vv~~hG~~~~~~~~~~~~~~~~~~-~g~~v~~~d~ 103 (293)
.=||+.|| ++.....++.....+ +.|.|++.+.
T Consensus 163 nEviLT~g---~SrTV~~FL~~A~kk~Rkf~viVaE~ 196 (353)
T KOG1465|consen 163 NEVILTLG---SSRTVENFLKHAAKKGRKFRVIVAEG 196 (353)
T ss_pred CceEEecC---ccHHHHHHHHHHHhccCceEEEEeec
Confidence 55888898 344444454444344 6688877653
No 372
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=20.47 E-value=6.1e+02 Score=22.54 Aligned_cols=104 Identities=17% Similarity=0.063 Sum_probs=61.8
Q ss_pred CCceEEEEEcCCCCChhhHHHHHHHHHhhcCeeEEEEccccccCCCCCC--CCCchhhhHHHHHHHHHHHhcCCC-ccEE
Q 022700 65 FARFTLLYSHGNAADLGQMLELFIELRAHLRVNIMSYDYSGYGASTGKP--SEFNTYYDIEAVYNCLKREYNVKQ-EELI 141 (293)
Q Consensus 65 ~~~~~vv~~hG~~~~~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~d~~~~i~~l~~~~~~~~-~~i~ 141 (293)
.....++++.-..+....-......+ ...|+-|+-.|..++=.-.+.. .......|++...+++....+... -.-+
T Consensus 46 ~~~~~villSd~~G~~d~~~s~a~al-~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PV 124 (456)
T COG3946 46 DPQGLVILLSDEAGIGDQERSRADAL-LARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPV 124 (456)
T ss_pred CcceeeEEEEcccChhhhhcchhHHH-hhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccce
Confidence 34556666665444444444445555 6778878888877653222111 122345677777776655543211 2357
Q ss_pred EEEeccChHHHHHHHHhcCC--ccEEEEec
Q 022700 142 LYGQSVGSGPTLHLASRLQK--LRGVVLHS 169 (293)
Q Consensus 142 l~G~S~Gg~~a~~~a~~~p~--v~~~i~~~ 169 (293)
|.|--.||.++...+++.|. +.+.+...
T Consensus 125 l~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 125 LTGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred EeecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 88899999999999998772 55555443
No 373
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=20.44 E-value=80 Score=25.27 Aligned_cols=39 Identities=13% Similarity=0.067 Sum_probs=25.0
Q ss_pred CceEEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEccc
Q 022700 66 ARFTLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYS 104 (293)
Q Consensus 66 ~~~~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~ 104 (293)
..|+||++.|+.+++.. ....+...+...|+.|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 35799999998876633 3333333337889999998766
No 374
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=20.40 E-value=1.2e+02 Score=23.96 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHHhcCCCccEEEEEeccChHHHHHH
Q 022700 120 YDIEAVYNCLKREYNVKQEELILYGQSVGSGPTLHL 155 (293)
Q Consensus 120 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~ 155 (293)
.++...++|....+++ +.|+++||+-=|.+...+
T Consensus 76 ~~~l~sleyAv~~L~v--~~IiV~GH~~CGav~aa~ 109 (207)
T COG0288 76 GSVLRSLEYAVYVLGV--KEIIVCGHTDCGAVKAAL 109 (207)
T ss_pred cchhHHHHHHHHHcCC--CEEEEecCCCcHHHHhcc
Confidence 5678889999999988 899999998555554433
No 375
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=20.30 E-value=2.8e+02 Score=18.52 Aligned_cols=79 Identities=13% Similarity=0.040 Sum_probs=45.7
Q ss_pred CceEEEEEcCCCCC-hhhHHHHHHHHHhhcCeeEEEEccccccCCCCCCCCCchhhhHHHHHHHHHHHhcCC-CccEEEE
Q 022700 66 ARFTLLYSHGNAAD-LGQMLELFIELRAHLRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYNCLKREYNVK-QEELILY 143 (293)
Q Consensus 66 ~~~~vv~~hG~~~~-~~~~~~~~~~~~~~~g~~v~~~d~~g~G~s~~~~~~~~~~~d~~~~i~~l~~~~~~~-~~~i~l~ 143 (293)
..++|||..|.... .-.|...+..++.+.|+....+|... . .+ ..+++.+..+.. -..|.+-
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~----------~---~~---~~~~l~~~tg~~tvP~vfi~ 74 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE----------D---PE---IRQGIKEYSNWPTIPQLYVK 74 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC----------C---HH---HHHHHHHHhCCCCCCEEEEC
Confidence 56889998886322 12345566667688887666666530 0 11 223333333321 1356777
Q ss_pred EeccChHHHHHHHHhcC
Q 022700 144 GQSVGSGPTLHLASRLQ 160 (293)
Q Consensus 144 G~S~Gg~~a~~~a~~~p 160 (293)
|...||.-.+..+.+..
T Consensus 75 g~~iGG~ddl~~l~~~g 91 (97)
T TIGR00365 75 GEFVGGCDIIMEMYQSG 91 (97)
T ss_pred CEEEeChHHHHHHHHCc
Confidence 78899988877665543
No 376
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=20.28 E-value=5e+02 Score=21.42 Aligned_cols=39 Identities=8% Similarity=0.007 Sum_probs=22.6
Q ss_pred EEEEEcCCCCChhh-HHHHHHHHHhhcCeeEEEEcccccc
Q 022700 69 TLLYSHGNAADLGQ-MLELFIELRAHLRVNIMSYDYSGYG 107 (293)
Q Consensus 69 ~vv~~hG~~~~~~~-~~~~~~~~~~~~g~~v~~~d~~g~G 107 (293)
++|++-|+++++.. ....+...+.+.++.|..++-...+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57889999988754 3445555557788888888755544
No 377
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.22 E-value=1.5e+02 Score=26.30 Aligned_cols=38 Identities=24% Similarity=0.394 Sum_probs=22.4
Q ss_pred CcEEEEecCCCCccChhhHHHHHHHhcCCcceEEecCCCCCC
Q 022700 201 CPVLVIHGTNDDIVDLSHGKRLWELSKEKYDPLWVKGGGHCN 242 (293)
Q Consensus 201 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 242 (293)
..+++..|..|++-..... +........+++++++|+.
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeec
Confidence 4799999999998665522 2233333456789999985
Done!