Your job contains 1 sequence.
>022702
MSCNGMAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDA
GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQ
VAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTES
INLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVAAQ
LFHNSSSSRPDLQCQKIEQNMQGTKDQESLSSMFCGMDDQSGFWPWLEQHNFS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022702
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 941 1.4e-94 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 654 2.2e-76 2
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 549 4.9e-53 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 463 6.4e-44 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 374 1.7e-34 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 349 7.7e-32 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 346 1.6e-31 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 345 2.0e-31 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 256 2.7e-25 2
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 277 3.3e-24 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 257 4.3e-22 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 251 1.9e-21 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 246 6.3e-21 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 243 1.3e-20 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 243 1.3e-20 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 228 5.1e-19 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 226 8.3e-19 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 213 2.0e-17 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 213 1.1e-16 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 205 1.4e-16 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 204 5.1e-16 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 203 7.0e-16 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 203 4.5e-15 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 199 5.8e-15 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 188 1.0e-14 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 195 7.1e-14 1
UNIPROTKB|A7YWK1 - symbol:HHEX "HHEX protein" species:991... 154 5.5e-09 1
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 161 7.2e-09 1
UNIPROTKB|F1SC87 - symbol:HHEX "Uncharacterized protein" ... 151 1.2e-08 1
UNIPROTKB|E2QXS9 - symbol:HHEX "Uncharacterized protein" ... 151 1.3e-08 1
UNIPROTKB|O13023 - symbol:hhex "Hematopoietically-express... 148 3.0e-08 1
UNIPROTKB|F8VWZ5 - symbol:HLX "H2.0-like homeobox protein... 131 3.3e-08 1
UNIPROTKB|I3L383 - symbol:HOXB8 "Homeobox protein Hox-B8"... 131 3.3e-08 1
ZFIN|ZDB-GENE-030131-4340 - symbol:nkx2.9 "NK2 transcript... 131 3.3e-08 1
UNIPROTKB|F1NZJ4 - symbol:HOXD8 "Homeobox protein Hox-D8"... 130 4.3e-08 1
UNIPROTKB|F1P4U9 - symbol:HOXD8 "Homeobox protein Hox-D8"... 130 4.3e-08 1
UNIPROTKB|P15142 - symbol:CHOX-7 "Homeobox protein CHOX-7... 130 4.3e-08 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 130 4.3e-08 1
ZFIN|ZDB-GENE-040724-40 - symbol:lbx1a "ladybird homeobox... 146 5.0e-08 1
UNIPROTKB|Q8AWG6 - symbol:hhex "Hematopoietically-express... 145 7.1e-08 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 144 8.7e-08 1
RGD|1595784 - symbol:Hoxc9 "homeobox C9" species:10116 "R... 126 1.2e-07 1
UNIPROTKB|P18866 - symbol:Hoxc8 "Homeobox protein Hox-C8"... 126 1.2e-07 1
WB|WBGene00004011 - symbol:pha-2 species:6239 "Caenorhabd... 126 1.2e-07 1
ZFIN|ZDB-GENE-990415-108 - symbol:hoxb8a "homeo box B8a" ... 141 1.4e-07 1
UNIPROTKB|H0YHX3 - symbol:HOXA4 "Homeobox protein Hox-A4"... 125 1.5e-07 1
RGD|1586211 - symbol:Hoxb8 "homeo box B8" species:10116 "... 125 1.5e-07 1
UNIPROTKB|F1P4U7 - symbol:HOXD11 "Homeobox protein Hox-D1... 124 2.0e-07 1
FB|FBgn0034520 - symbol:lms "lateral muscles scarcer" spe... 144 2.5e-07 1
UNIPROTKB|Q2PYN8 - symbol:lbx1 "Transcription factor LBX1... 140 2.6e-07 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 122 3.3e-07 1
UNIPROTKB|F1NMY3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 137 3.9e-07 1
UNIPROTKB|I3L3R1 - symbol:HOXB8 "Homeobox B8, isoform CRA... 137 4.0e-07 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 145 4.5e-07 1
UNIPROTKB|P23459 - symbol:HOXD8 "Homeobox protein Hox-D8"... 130 4.7e-07 1
UNIPROTKB|F1RWG3 - symbol:HOXB8 "Homeobox protein Hox-B8"... 137 4.8e-07 1
RGD|3079 - symbol:Meox2 "mesenchyme homeobox 2" species:1... 139 4.9e-07 1
UNIPROTKB|P39020 - symbol:Meox2 "Homeobox protein MOX-2" ... 139 4.9e-07 1
ZFIN|ZDB-GENE-990415-4 - symbol:hoxa11b "homeo box A11b" ... 138 5.3e-07 1
RGD|1586210 - symbol:Hoxc4 "homeo box C4" species:10116 "... 120 5.5e-07 1
UNIPROTKB|P18865 - symbol:Hoxc4 "Homeobox protein Hox-C4"... 120 5.5e-07 1
MGI|MGI:96172 - symbol:Hoxa11 "homeobox A11" species:1009... 130 5.8e-07 2
RGD|1564605 - symbol:Hoxa11 "homeobox A11" species:10116 ... 130 5.8e-07 2
UNIPROTKB|G5E5Q0 - symbol:BARX2 "Uncharacterized protein"... 133 7.0e-07 1
ZFIN|ZDB-GENE-020117-2 - symbol:gbx1 "gastrulation brain ... 138 7.1e-07 1
UNIPROTKB|E2RQ19 - symbol:HOXB8 "Uncharacterized protein"... 135 7.1e-07 1
UNIPROTKB|P17481 - symbol:HOXB8 "Homeobox protein Hox-B8"... 135 7.2e-07 1
UNIPROTKB|Q0P4H6 - symbol:lbx1 "Transcription factor LBX1... 136 7.4e-07 1
ZFIN|ZDB-GENE-980526-403 - symbol:nkx2.2a "NK2 transcript... 136 8.1e-07 1
UNIPROTKB|P14838 - symbol:HOXB5 "Homeobox protein Hox-B5"... 118 9.2e-07 1
WB|WBGene00000434 - symbol:ceh-9 species:6239 "Caenorhabd... 118 9.2e-07 1
MGI|MGI:96109 - symbol:Hlx "H2.0-like homeobox" species:1... 140 9.5e-07 1
UNIPROTKB|F1NE14 - symbol:LOC100858551 "Uncharacterized p... 122 9.9e-07 1
UNIPROTKB|Q98924 - symbol:HOXA9 "Homeobox protein Hox-A9"... 122 9.9e-07 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 142 1.0e-06 1
RGD|619932 - symbol:Hhex "hematopoietically expressed hom... 135 1.1e-06 1
UNIPROTKB|J9NWE8 - symbol:HOXA3 "Uncharacterized protein"... 139 1.1e-06 1
UNIPROTKB|F1SHT1 - symbol:HOXA3 "Uncharacterized protein"... 139 1.1e-06 1
MGI|MGI:103219 - symbol:Meox2 "mesenchyme homeobox 2" spe... 136 1.1e-06 1
UNIPROTKB|G3V815 - symbol:Hoxc10 "Homeo box C10, isoform ... 137 1.1e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 117 1.2e-06 1
UNIPROTKB|I3LRX4 - symbol:I3LRX4 "Uncharacterized protein... 117 1.2e-06 1
UNIPROTKB|P09078 - symbol:HOXB8 "Homeobox protein Hox-B8"... 117 1.2e-06 1
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 142 1.2e-06 1
UNIPROTKB|F1S9I5 - symbol:HLX "Uncharacterized protein" s... 133 1.3e-06 1
UNIPROTKB|Q08DG7 - symbol:HOXA3 "Homeobox protein Hox-A3"... 138 1.4e-06 1
ZFIN|ZDB-GENE-001206-2 - symbol:lbx2 "ladybird homeobox h... 133 1.5e-06 1
UNIPROTKB|F1NVN6 - symbol:MNR2 "Uncharacterized protein" ... 116 1.5e-06 1
UNIPROTKB|P14839 - symbol:HOXB6 "Homeobox protein Hox-B6"... 116 1.5e-06 1
UNIPROTKB|E1C1I8 - symbol:LOC100858967 "Uncharacterized p... 129 1.6e-06 1
MGI|MGI:96189 - symbol:Hoxb8 "homeobox B8" species:10090 ... 132 1.7e-06 1
UNIPROTKB|G3V6Y1 - symbol:Hoxb8 "Homeo box B8 (Mapped)" s... 132 1.7e-06 1
UNIPROTKB|G1K364 - symbol:LOC100858967 "Uncharacterized p... 134 1.8e-06 1
UNIPROTKB|P31258 - symbol:HOXA11 "Homeobox protein Hox-A1... 134 1.8e-06 1
UNIPROTKB|F8VSA3 - symbol:HOXD8 "Homeobox protein Hox-D8"... 126 1.8e-06 1
MGI|MGI:96185 - symbol:Hoxb4 "homeobox B4" species:10090 ... 132 1.8e-06 1
UNIPROTKB|F6Q274 - symbol:F6Q274 "Uncharacterized protein... 133 2.0e-06 1
UNIPROTKB|J9NYL4 - symbol:LBX1 "Uncharacterized protein" ... 133 2.0e-06 1
UNIPROTKB|P52954 - symbol:LBX1 "Transcription factor LBX1... 133 2.0e-06 1
UNIPROTKB|D7R811 - symbol:LBX1 "Uncharacterized protein" ... 133 2.0e-06 1
WARNING: Descriptions of 591 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 194/307 (63%), Positives = 230/307 (74%)
Query: 1 MSCN-GMAFFPTNFMLQTPHEDEH--QTPTSLNPILPSCA-PQDFHGVASFLGKRSM--S 54
MSCN GM+FFP+NFM+QT +ED+H Q+P SL P+LPSC+ PQD HG ASFLGKRS
Sbjct: 1 MSCNNGMSFFPSNFMIQTSYEDDHPHQSP-SLAPLLPSCSLPQDLHGFASFLGKRSPMEG 59
Query: 55 FSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL 114
++ G NGE+D+SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL
Sbjct: 60 CCDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL 119
Query: 115 GLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 174
GLQPRQ+AIWFQNRRARWKTKQLEKDYD LKRQ++ +KA+ + LQ NQKL AEIM LK+
Sbjct: 120 GLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKN 179
Query: 175 REVTESINLNKETEGSCSNRSENSSD-IKLDISRTP-AIDSPMST-HP-----TSRNLFP 226
RE TESINLNKETEGSCSNRS+NSSD ++LDIS P + DS ++ HP R+ FP
Sbjct: 180 REQTESINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFP 239
Query: 227 TKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMQGTKDQESLSSMFCGMDDQSGFWPW 286
++ T Q F NSSS Q+M K++ S+S+MFC MDD SGFWPW
Sbjct: 240 PSPATATTTTTTMQFFQNSSSG----------QSM--VKEENSISNMFCAMDDHSGFWPW 287
Query: 287 LEQHNFS 293
L+Q ++
Sbjct: 288 LDQQQYN 294
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 654 (235.3 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 146/241 (60%), Positives = 174/241 (72%)
Query: 1 MSCN--GMAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSM--SFS 56
MSCN G+AFFP NF LQ H++E P L QDFHG FLGKRS +
Sbjct: 1 MSCNNNGLAFFPENFSLQNHHQEEEDHPQLL---------QDFHG---FLGKRSPMNNVQ 48
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 116
G + NG++++SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK++LARALGL
Sbjct: 49 GF-CNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGL 107
Query: 117 QPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSRE 176
QPRQ+AIWFQNRRAR KTKQLEKDYD+LKRQ+E+++ + E LQ QNQKL A++MALKSRE
Sbjct: 108 QPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSRE 167
Query: 177 VTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMST-HP--TSRNLFPTKSTSSV 233
ESINLNKETEGSCS+RSEN S DI R P IDS + HP T+ F S+S
Sbjct: 168 PIESINLNKETEGSCSDRSENISG---DI-RPPEIDSQFALGHPPTTTTMQFFQNSSSEQ 223
Query: 234 R 234
R
Sbjct: 224 R 224
Score = 134 (52.2 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 236 TVAAQLFHNSSSSRPDLQCQKIEQNMQGTKDQESLSSMFCGMDDQSGFWPWLEQHNFS 293
T Q F NSSS EQ M K++ S+S+MFCG+DDQSGFWPWL+Q ++
Sbjct: 210 TTTMQFFQNSSS----------EQRM--VKEENSISNMFCGIDDQSGFWPWLDQQQYN 255
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 120/233 (51%), Positives = 157/233 (67%)
Query: 6 MAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN 65
MAF FM Q HED Q LPSC P F+G +++ RSMS +
Sbjct: 16 MAFPQHGFMFQQLHEDNSQDQ------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDHNQT 69
Query: 66 -GEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVA 122
E++ SDDG+ GEKK+RL +EQVK LEK+FELGNKLEPERK+QLA+ALG+QPRQ+A
Sbjct: 70 LDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIA 129
Query: 123 IWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESIN 182
IWFQNRRARWKT+QLE+DYD LK+Q+E++K+D +L A N+KL AE+MALK++E E
Sbjct: 130 IWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNEGNI 189
Query: 183 LNKETEGSCSNR--SENSSDIKLDISRTPAIDSPMSTHP-TSRNLFPTKSTSS 232
+ +E E S SN +ENSSDI L++ R ++TH T ++LFP+ SS
Sbjct: 190 VKREAEASWSNNGSTENSSDINLEMPR-----ETITTHVNTIKDLFPSSIRSS 237
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 103/223 (46%), Positives = 142/223 (63%)
Query: 62 EEANGEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPR 119
++ ED+ SDDGS GEKK+RLN+EQV+ LEK+FELGNKLEPERKMQLA+ALGLQPR
Sbjct: 95 DQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPR 154
Query: 120 QVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTE 179
Q+AIWFQNRRARWKTKQLE+DYD LK+Q++ +K+D ++L A N+KLHAE++ALK + E
Sbjct: 155 QIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKE 214
Query: 180 SINLNKE-TEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTS-RNLFPTKSTSSVRPTV 237
S + +E E S SN ++ + S D+ H + ++LFP+ S+ T
Sbjct: 215 SAKIKREFAEASWSNNGSTENNHNNNSS-----DA---NHVSMIKDLFPSSIRSATATTT 266
Query: 238 AAQLFHNSSSSRPDLQCQKIEQNMQGTKDQESLSSMFCGMDDQ 280
+ + H + C NM D+ + +S + D Q
Sbjct: 267 STHIDHQIVQDQDQGFC-----NMFNGIDETTSASYWAWPDQQ 304
Score = 154 (59.3 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 79/303 (26%), Positives = 136/303 (44%)
Query: 6 MAFFPTNFMLQTPHEDE-HQTPTSLNPILPSCAPQDFHGVA-SFLGKRSMSFSGIDAGEE 63
MAF FM Q HED H P+ + LPSC P F+G +++ RSMSF+G+
Sbjct: 22 MAFPQHGFMFQQLHEDNAHHLPSPTS--LPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHH 79
Query: 64 ANGEDDFS----DDGSQAGEKKRRLNMEQVKTL-EKNFELGNKLEPERKMQLARALG--L 116
+ + +D Q GE+ + L EK L LE R ++ + LG L
Sbjct: 80 LTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLN--LEQVRALEKSFELGNKL 137
Query: 117 QP-RQV----AIWFQNRR-ARW-KTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEI 169
+P R++ A+ Q R+ A W + ++ L+R Y+++K + L++ N L A
Sbjct: 138 EPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHN 197
Query: 170 MALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKS 229
L + E + L K +R E S+ IK + + ++ S + ++ N S
Sbjct: 198 KKLHA----ELVALKKH------DRKE-SAKIKREFA-----EASWSNNGSTENNHNNNS 241
Query: 230 TSSVRPTVAAQLFHNS-SSSRPDLQCQKIEQNMQGTKDQESLSSMFCGMDD--QSGFWPW 286
+ + ++ LF +S S+ I+ + +DQ +MF G+D+ + +W W
Sbjct: 242 SDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQ-GFCNMFNGIDETTSASYWAW 300
Query: 287 LEQ 289
+Q
Sbjct: 301 PDQ 303
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 86/175 (49%), Positives = 116/175 (66%)
Query: 59 DAGEEANGEDDFSDDG---SQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 115
DA E+ +D G S A EKKRRL +EQVK LEKNFE+ NKLEPERK++LA+ LG
Sbjct: 48 DALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELG 107
Query: 116 LQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 175
LQPRQVAIWFQNRRARWKTKQLE+DY +LK ++A+K +R++LQ N L +I LK++
Sbjct: 108 LQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAK 167
Query: 176 ---EVTESINLNKETEGSCSNRSENSSDIKLDIS-RTPAIDSPMSTH-PTSRNLF 225
E + I N + +N+S +++ L++S R+P+ + T PTS F
Sbjct: 168 LNVEGVKGIEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAF 222
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 77/143 (53%), Positives = 101/143 (70%)
Query: 51 RSMSFSGIDAGEEANGEDDFSDDGSQAG--EKKRRLNMEQVKTLEKNFELGNKLEPERKM 108
+SM G D E+A +++S + G EKKRRL ++QVK LEKNFEL NKLEPERK
Sbjct: 31 QSM-LEGYD--EDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKT 87
Query: 109 QLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAE 168
+LA+ LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+ N L E
Sbjct: 88 KLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQE 147
Query: 169 IMALKSREVTESINLNKE--TEG 189
I +K++ E N N + TEG
Sbjct: 148 ISKIKAKVNGEEDNNNNKAITEG 170
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 79/160 (49%), Positives = 101/160 (63%)
Query: 28 SLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNME 87
+LNP++ + + KR FS E +DDF DD Q EKKRRL E
Sbjct: 23 NLNPVVQGGGARSMMNMEE-TSKRRPFFSS----PEDLYDDDFYDD--QLPEKKRRLTTE 75
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQ 147
QV LEK+FE NKLEPERK QLA+ LGLQPRQVA+WFQNRRARWKTKQLE+DYDLLK
Sbjct: 76 QVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKST 135
Query: 148 YEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKET 187
Y+ + ++ +++ N KL +E+ +L TE + +ET
Sbjct: 136 YDQLLSNYDSIVMDNDKLRSEVTSL-----TEKLQGKQET 170
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 77/167 (46%), Positives = 107/167 (64%)
Query: 55 FSGIDAGEEANGEDDFSDDGSQA-GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARA 113
F + G E E + G EKKRRL++ QVK LEKNFEL NKLEPERK++LA+
Sbjct: 36 FQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQE 95
Query: 114 LGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 173
LGLQPRQVA+WFQNRRARWKTKQLEKDY +LK QY++++ + ++L+ N+ L EI LK
Sbjct: 96 LGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLK 155
Query: 174 SREVTESINLNKETEGSCSNRSENSSDIKLD-ISRTPAIDSPMSTHP 219
++ + +E E + + +E+ +K + +S I S+ P
Sbjct: 156 TK-LNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSPP 201
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 256 (95.2 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 48/92 (52%), Positives = 68/92 (73%)
Query: 81 KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
++R + EQ+K+LE FE +LEP +K+Q+AR LGLQPRQVAIWFQN+RARWKTKQLEK+
Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKE 90
Query: 141 YDLLKRQYEAVKADREALQAQNQKLHAEIMAL 172
Y+ L+ Y + + E ++ + Q L +E+ L
Sbjct: 91 YNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122
Score = 46 (21.3 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 14/49 (28%), Positives = 22/49 (44%)
Query: 162 NQKLHAEIMALKSREVTESINLNKETEGSCSNRSEN----SSDIKLDIS 206
N + E + E +N+ ++ + SC SEN +SD LD S
Sbjct: 175 NNNIKTEYFGFEEETDHELMNIVEKADDSCLTSSENWGGFNSDSLLDQS 223
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 56/112 (50%), Positives = 80/112 (71%)
Query: 81 KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+RR + EQ+K+LE FE +LEP +K+QLAR LGLQPRQVAIWFQN+RARWK+KQLE +
Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92
Query: 141 YDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCS 192
Y++L++ Y+ + + E+L+ + Q L +E+ LK E T+ +E E CS
Sbjct: 93 YNILRQNYDNLASQFESLKKEKQALVSELQRLK--EATQK--KTQEEERQCS 140
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 60/139 (43%), Positives = 86/139 (61%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S DG +KR+L EQV LE +F +KLE ERK +LA LGL PRQVA+WFQNRRA
Sbjct: 46 SADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRA 105
Query: 131 RWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGS 190
RWK K+LE++Y+ LK ++ V D+ L+++ +L ++ + RE+ L + EG
Sbjct: 106 RWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAE-REIQR---LAERVEGG 161
Query: 191 CSNRSENSSDIKLDISRTP 209
SN S SS + ++ + TP
Sbjct: 162 SSN-SPISSSVSVEANETP 179
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 59/141 (41%), Positives = 86/141 (60%)
Query: 71 SDDGSQAGE---KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQN 127
+++G G +KR+L+ EQV+ LE +FE +KLE ERK +LA LGL PRQVA+WFQN
Sbjct: 49 AEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQN 108
Query: 128 RRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKET 187
RRARWK K++E +Y LK YE ++ L ++ L ++ + RE+ L K
Sbjct: 109 RRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAE-REIQR---LAKRV 164
Query: 188 EGSCSNRSENSSDIKLDISRT 208
EG+ SN S SS + ++ + T
Sbjct: 165 EGTLSN-SPISSSVTIEANHT 184
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 45/88 (51%), Positives = 68/88 (77%)
Query: 80 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
KK+RL Q+ +LE++F+ KL+ +RK++L+R LGLQPRQ+A+WFQNRRARWK KQLE+
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 140 DYDLLKRQYEAVKADREALQAQNQKLHA 167
YD L+++Y+ V +++ L + +KL A
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRA 164
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/140 (41%), Positives = 89/140 (63%)
Query: 62 EEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFE----LGN----KLEPERKMQLARA 113
E GE+ S +G + +KK+++ EQ+K LE++F+ L KL P+RKM+L++
Sbjct: 55 ESGYGEESNSFNGQE--KKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKE 112
Query: 114 LGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 173
LGLQPRQ+A+WFQNR+ARWK KQLE Y+ L+++++ V ++E LQ E++ LK
Sbjct: 113 LGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQE-------ELIQLK 165
Query: 174 SREVTESINLNKET-EGSCS 192
S +S K+T E +CS
Sbjct: 166 SMIREDSSCKKKQTWEKACS 185
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/151 (38%), Positives = 87/151 (57%)
Query: 61 GEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQ 120
G A E+D ++ G +KR+L EQV LE +F +KLE RK ++A LGL PRQ
Sbjct: 54 GSSATNEEDVAEIGGML--RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQ 111
Query: 121 VAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS--REVT 178
VA+WFQNRRARWK K+LE++Y LK ++ V + L++Q KL ++ +S R+++
Sbjct: 112 VAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLS 171
Query: 179 ESINLNKETEGSCSNRSENSSDIKLDISRTP 209
E + T S S+ S +++ D P
Sbjct: 172 ERLE-EMPTNSSSSSLSVEANNAPTDFELAP 201
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 75 SQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
SQ KK+RL +QV+ LEK F + KLEP+ K+QL+ LGL RQVA+WFQN+RAR+KT
Sbjct: 6 SQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKT 65
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 175
+ LE + L+ ++EA +D+ L+ Q Q L E+ +++
Sbjct: 66 QSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQ 106
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 59/146 (40%), Positives = 75/146 (51%)
Query: 36 CAPQDFH-GVASFLG---KRSMSFSGIDAGEEANG----------EDDFSDDGSQAGEKK 81
C H G++SF KR SG D EEA DD D+ + KK
Sbjct: 68 CRQTSSHSGISSFSSGRVKREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKK 127
Query: 82 RRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDY 141
RL +Q LE NF+L + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D
Sbjct: 128 LRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDC 187
Query: 142 DLLKRQYEAVKADREALQAQNQKLHA 167
+ LK+ E + + LQ + Q L A
Sbjct: 188 EFLKKCCETLTDENRRLQKELQDLKA 213
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 35 SCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEK 94
S +P G + + + + + E+ + E+ DDGS KK RL EQ + LE
Sbjct: 94 SSSPLSDEGSGGGRDQLRLDMNRLPSSEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLED 153
Query: 95 NFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKAD 154
+F + L P++K LA+ L L+PRQ+ +WFQNRRAR K KQ E + + LKR + +
Sbjct: 154 SFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGS---- 209
Query: 155 REALQAQNQKLHAEIMALKSREV 177
L +N +LH E+ L++ +V
Sbjct: 210 ---LTEENHRLHREVEELRAMKV 229
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 213 (80.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 57/160 (35%), Positives = 92/160 (57%)
Query: 14 MLQTPHEDEHQTPT-SLNP--ILPSCAPQDFHGVASFLGKRSMSFSGID-----AGEEAN 65
+++ E+E P+ S++P + S DF G+ S+ +R + ID + A+
Sbjct: 119 VVEEEEEEEEAVPSMSVSPPDSVTSSFQLDF-GIKSYGYERRSNKRDIDDEVERSASRAS 177
Query: 66 GEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWF 125
ED+ ++GS KK RL+ +Q LE +F+ + L P++K+ LA+ L L+PRQV +WF
Sbjct: 178 NEDNDDENGST--RKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWF 235
Query: 126 QNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKL 165
QNRRAR K KQ E D + LKR E++ + LQ + ++L
Sbjct: 236 QNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKEL 275
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/154 (37%), Positives = 84/154 (54%)
Query: 36 CAPQDFH-GVASFLGKRSMSFSGIDAGEEANGEDDFS---------DDGSQAGEKKRRLN 85
C H GV+SF R + D GEE+ E++ + D+ + KK RL
Sbjct: 60 CRQTSSHSGVSSFSSGRVVKRER-DGGEESPEEEEMTERVISDYHEDEEGISARKKLRLT 118
Query: 86 MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLK 145
+Q LE++F+ + L P++K LAR L L+PRQV +WFQNRRAR K KQ E D + LK
Sbjct: 119 KQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK 178
Query: 146 RQYEAVKADREALQAQNQKLHAEIMALKSREVTE 179
+ E + AD +N +L EI LK+ ++T+
Sbjct: 179 KCCETL-AD------ENIRLQKEIQELKTLKLTQ 205
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 204 (76.9 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 43/102 (42%), Positives = 60/102 (58%)
Query: 64 ANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAI 123
+ G D +DG + KK RL+ +Q LE+ F+ N L P++K+ LA+ L L RQV +
Sbjct: 114 SRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEV 173
Query: 124 WFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKL 165
WFQNRRAR K KQ E D + LKR E + + LQ + +L
Sbjct: 174 WFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMEL 215
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 203 (76.5 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 48/116 (41%), Positives = 64/116 (55%)
Query: 58 IDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQ 117
+D D+ D G + KK RL+ +Q LE F+ N L P++K+ LA+ LGL
Sbjct: 113 LDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLT 172
Query: 118 PRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 173
RQV +WFQNRRAR K KQ E D + LKR E + + L+ K AE+ ALK
Sbjct: 173 ARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLE----KEAAELRALK 224
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 203 (76.5 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 67 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQ 126
++D S +G + KK RL+ EQ LE+ F+ + L P++KM LA+ L L+ RQV +WFQ
Sbjct: 149 DEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQ 208
Query: 127 NRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 167
NRRAR K KQ E D + LKR E + + LQ + +L A
Sbjct: 209 NRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRA 249
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 199 (75.1 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 50/124 (40%), Positives = 69/124 (55%)
Query: 44 VASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLE 103
V+S GKRS D DD +DG + KK RL+ +Q LE+ F+ + L
Sbjct: 96 VSSSTGKRSEREEDTDPQGSRGISDD--EDGDNS-RKKLRLSKDQSAILEETFKDHSTLN 152
Query: 104 PERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQ 163
P++K LA+ LGL+ RQV +WFQNRRAR K KQ E D + L+R E + + LQ +
Sbjct: 153 PKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVT 212
Query: 164 KLHA 167
+L A
Sbjct: 213 ELRA 216
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 188 (71.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/159 (33%), Positives = 78/159 (49%)
Query: 14 MLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASF-LGKRSMSFSG----IDAGEEANGED 68
M +P+ S+ PS + D HG+ F + + + I A N ED
Sbjct: 1 MALSPNSSSLDLTISIPSFSPSPSLGDHHGMRDFDINQTPKTEEDREWMIGATPHVN-ED 59
Query: 69 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
D + G + KK RL EQ LE++F + L P++K LA L L RQV +WFQNR
Sbjct: 60 DSNSGGRR--RKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNR 117
Query: 129 RARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 167
RAR K K E + + LKR + ++K LQ + ++L A
Sbjct: 118 RARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRA 156
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 195 (73.7 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 61 GEEANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPR 119
G + G DD D G+ G +K+ RL+ +Q LE+ F+ + L P++K+ LA+ L L+ R
Sbjct: 144 GGGSGGSDD-EDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRAR 202
Query: 120 QVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 167
QV +WFQNRRAR K KQ E D + LKR + + + LQ + +L A
Sbjct: 203 QVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRA 250
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 154 (59.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E +
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 204
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIK 202
K + E++ D Q Q+ AL+S + + S ++ E S S+ DI+
Sbjct: 205 NKKEELESL--DNSCDQRQDLPSDQNTGALESSQCSPSPVSQEDLESEISEDSDQEVDIE 262
Query: 203 LD 204
D
Sbjct: 263 GD 264
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRLNM---EQVKTLEKNFELGNKLEPERKMQLARA 113
G +G +G DGS+ KK+R + +Q++ LE +F+ + +++ QL+R
Sbjct: 9 GSGSGSGGDGGGSHHHDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRE 68
Query: 114 LGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 173
LGL PRQ+ WFQNRR + LK Q+E +AD AL+A+N K+ E +A++
Sbjct: 69 LGLAPRQIKFWFQNRRTQ------------LKAQHE--RADNSALKAENDKIRCENIAIR 114
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 151 (58.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E +
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQN 202
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIK 202
K + E++ D Q Q+ AL S + + S ++ E S S+ DI+
Sbjct: 203 NKKEELESL--DNSCDQRQDLPSEQNKGALDSSQCSPSPVSQEDLESEISEDSDQEVDIE 260
Query: 203 LD 204
D
Sbjct: 261 GD 262
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 151 (58.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIK 202
K + E++ D Q Q+ AL S + + S ++ E S S+ DI+
Sbjct: 204 NKKEELESL--DNPCDQRQDLSSEQNKGALDSSQCSPSPASQEDLESEISEDSDQEVDIE 261
Query: 203 LD 204
D
Sbjct: 262 GD 263
>UNIPROTKB|O13023 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0001889 "liver development" evidence=IEP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEP;IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 CTD:3087 HOVERGEN:HBG055460 KO:K08024
HSSP:P22808 EMBL:U94837 EMBL:BC059320 RefSeq:NP_001079059.1
UniGene:Xl.225 ProteinModelPortal:O13023 SMR:O13023 GeneID:373590
KEGG:xla:373590 Xenbase:XB-GENE-865680 Uniprot:O13023
Length = 272
Score = 148 (57.2 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 202
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT-ESINLNKETEGSCSNRSENSSDI 201
K + E+++ E ++Q + L AE KSRE + + + ++G+ + + SD
Sbjct: 203 NKKDETESLENICE--ESQERCLSAE---QKSRESSLDDPTSSPTSQGNLDSEVSDDSDQ 257
Query: 202 KLDI 205
++DI
Sbjct: 258 EVDI 261
>UNIPROTKB|F8VWZ5 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0046622
"positive regulation of organ growth" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 EMBL:AL445423 HGNC:HGNC:4978
IPI:IPI00643042 ProteinModelPortal:F8VWZ5 SMR:F8VWZ5
Ensembl:ENST00000427693 ArrayExpress:F8VWZ5 Bgee:F8VWZ5
Uniprot:F8VWZ5
Length = 151
Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 42/133 (31%), Positives = 63/133 (47%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 20 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD- 77
Query: 144 LKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKL 203
K E A + E +S ES + + E+ + +E + +
Sbjct: 78 -KEAGEKPSGGAPAADGEQD----ERSPSRSEGEAESESSDSESLDMAPSDTERTEGSER 132
Query: 204 DISRTPAIDSPMS 216
+ +T I +P++
Sbjct: 133 SLHQTTVIKAPVT 145
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 41/127 (32%), Positives = 60/127 (47%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQ 147
Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK K+ KD +
Sbjct: 6 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 58
Query: 148 YEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEG----SCS-NRSENSSDIK 202
+ + K ++E L+ QKL A + + N +G SC+ + I
Sbjct: 59 FPSSKCEQEELE--KQKLERAPEAADEGDAQKGDKKNGSVQGPWAGSCALGAPRKTCSIS 116
Query: 203 LDISRTP 209
IS P
Sbjct: 117 ARISGAP 123
>ZFIN|ZDB-GENE-030131-4340 [details] [associations]
symbol:nkx2.9 "NK2 transcription factor related,
locus 9 (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030131-4340
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0021514
HOGENOM:HOG000231923 HOVERGEN:HBG006689 eggNOG:NOG243784
OrthoDB:EOG466VN6 EMBL:DQ924560 IPI:IPI00617799 UniGene:Dr.79439
STRING:Q06AD2 InParanoid:Q06AD2 Uniprot:Q06AD2
Length = 164
Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 38/98 (38%), Positives = 49/98 (50%)
Query: 49 GKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKT--LEKNFELGNKLE-PE 105
G S S I+A ++ D S D KKRR+ + +T LE+ F L PE
Sbjct: 48 GHISSDDSNIEASPDSTEPDVLSVDTEHEKRKKRRVLFSKAQTYELERRFRQQRYLSAPE 107
Query: 106 RKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDL 143
R+ QLA L L P QV IWFQN R + K ++E DL
Sbjct: 108 RE-QLAHLLRLTPTQVKIWFQNHRYKMKRARIECAQDL 144
>UNIPROTKB|F1NZJ4 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AADN02020025 EMBL:AADN02020026
EMBL:AADN02020027 EMBL:AADN02020028 EMBL:AADN02020029
EMBL:AADN02020030 IPI:IPI00818317 Ensembl:ENSGALT00000038689
ArrayExpress:F1NZJ4 Uniprot:F1NZJ4
Length = 168
Score = 130 (50.8 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 74 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 132
Query: 136 QLEKD-YDLLKRQYEAVKADREALQAQNQK 164
+ KD + K++ + +A +E ++ +
Sbjct: 133 ENNKDKFPASKQEGKEGEAKKETHDLEDDR 162
>UNIPROTKB|F1P4U9 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 IPI:IPI00576774 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 Ensembl:ENSGALT00000015083
ArrayExpress:F1P4U9 Uniprot:F1P4U9
Length = 148
Score = 130 (50.8 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 54 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 112
Query: 136 QLEKD-YDLLKRQYEAVKADREALQAQNQK 164
+ KD + K++ + +A +E ++ +
Sbjct: 113 ENNKDKFPASKQEGKEGEAKKETHDLEDDR 142
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 130 (50.8 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 30/63 (47%), Positives = 36/63 (57%)
Query: 74 GSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
GS AG+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA
Sbjct: 18 GSGAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 77
Query: 131 RWK 133
+WK
Sbjct: 78 KWK 80
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 130 (50.8 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 27 TSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEA-NGEDDFSDDGSQAGEKKRR-L 84
+SL + + P D +GV + S E + N E+ +GS K+R
Sbjct: 4 SSLGLVDTTGGPGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAF 63
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 64 TKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 112
>ZFIN|ZDB-GENE-040724-40 [details] [associations]
symbol:lbx1a "ladybird homeobox 1a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040724-40 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 HOGENOM:HOG000007247
HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP EMBL:BX950184
EMBL:AL928816 IPI:IPI00513398 RefSeq:NP_001020703.1
UniGene:Dr.135691 Ensembl:ENSDART00000045351 GeneID:564103
KEGG:dre:564103 CTD:564103 InParanoid:Q6ZM39 OMA:DHTTSKE
NextBio:20885231 Uniprot:Q6ZM39
Length = 269
Score = 146 (56.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 55/178 (30%), Positives = 86/178 (48%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ L++D + +K E+ KA +K
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK-----LKRDLEEMKADVESAKA---VGNVPFEK 204
Query: 165 LHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSR 222
+ A++ L+ R V ++ + S SN ++ KL +S P+ SP + H TS+
Sbjct: 205 M-AKLADLEKR-VNGTLGDSSAVSPSRSNHEHEGTN-KLHMS--PS--SPYTDHTTSK 255
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 145 (56.1 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 145 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQG 204
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSR--EVTESINLNKETEGSCSNRSENSSD 200
K + E+++ E ++Q + L AE + +S E T S + + S+ S+ D
Sbjct: 205 NKKDETESLENICE--ESQERCLSAEQKSRESSLDEPTSSPTSQETLDSEVSDDSDQEVD 262
Query: 201 IKLD 204
I+ D
Sbjct: 263 IEGD 266
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 144 (55.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 41/127 (32%), Positives = 62/127 (48%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 143 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 202
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEI---MALKSREVTESINLNKETEGSCSNRSENSS 199
K + E++ + + Q Q L +E +L S + + S ++ E S S+
Sbjct: 203 NKKEELESLDSSCD----QRQDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQEV 258
Query: 200 DIKLDIS 206
DI+ D S
Sbjct: 259 DIEGDKS 265
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 126 (49.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 75 SQAGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
S G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +W
Sbjct: 11 SAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 70
Query: 133 KTKQLEKD 140
K K+ KD
Sbjct: 71 K-KENNKD 77
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 126 (49.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 75 SQAGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
S G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +W
Sbjct: 11 SAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKW 70
Query: 133 KTKQLEKD 140
K K+ KD
Sbjct: 71 K-KENNKD 77
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 126 (49.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
R EQ LE F+ L P+ + +LA++L L RQV WFQNRRA+W+ ++ KD
Sbjct: 82 RFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWR--RVRKD 137
>ZFIN|ZDB-GENE-990415-108 [details] [associations]
symbol:hoxb8a "homeo box B8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-108 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104332 EMBL:BX927395
IPI:IPI00993559 Ensembl:ENSDART00000123837 ArrayExpress:E7FB54
Bgee:E7FB54 Uniprot:E7FB54
Length = 246
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 135 KQLEKD-YDLLKRQYEAV-KADREALQAQNQKLHAE 168
K+ KD + K + E + K RE QA + E
Sbjct: 203 KENNKDKFPSSKSEQEQIEKEKREKEQASGTQSAGE 238
>UNIPROTKB|H0YHX3 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:AC004080 HGNC:HGNC:5105 Ensembl:ENST00000511914 Uniprot:H0YHX3
Length = 140
Score = 125 (49.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 29 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 88
Query: 131 RWKTKQLEKDYDLLKRQYEAVKADREA-LQAQNQKLHAEIMALKSREVTESI 181
+WK + + + A Q Q+ LH S V SI
Sbjct: 89 KWKKDHKLPNTKMRSSNSASASAGPPGKAQTQSPHLHPHPHPSTSTPVPSSI 140
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 125 (49.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQ 147
Q LEK F L +R+++++ ALGL RQV IWFQNRR +WK K+ KD +
Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------K 74
Query: 148 YEAVKADREALQAQ 161
+ + K ++E L+ +
Sbjct: 75 FPSSKCEQEELEKE 88
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E S Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 22 EAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 81
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 82 KIWFQNRRM--KEKKLNRD 98
>FB|FBgn0034520 [details] [associations]
symbol:lms "lateral muscles scarcer" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060361 "flight" evidence=IMP]
[GO:0007526 "larval somatic muscle development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007526 GeneTree:ENSGT00700000104206 GO:GO:0060361
RefSeq:NP_611491.1 UniGene:Dm.36477 ProteinModelPortal:A1ZBV6
SMR:A1ZBV6 PRIDE:A1ZBV6 EnsemblMetazoa:FBtr0086218 GeneID:37322
KEGG:dme:Dmel_CG13424 UCSC:CG13424-RA CTD:37322 FlyBase:FBgn0034520
eggNOG:NOG290719 InParanoid:A1ZBV6 OMA:PIQSIML OrthoDB:EOG4BVQ95
PhylomeDB:A1ZBV6 GenomeRNAi:37322 NextBio:803112 Bgee:A1ZBV6
Uniprot:A1ZBV6
Length = 411
Score = 144 (55.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 36/94 (38%), Positives = 50/94 (53%)
Query: 65 NGEDDF---SDDGSQAGE-KKRR----LNMEQVKTLEKNFELGNKLEPERKMQLARALGL 116
+G+ D SDDG+ G+ +K+R + Q+K LE FE G L ++ LA+ L L
Sbjct: 99 DGKSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQL 158
Query: 117 QPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEA 150
Q+ IWFQNRR +WK K D + L Y A
Sbjct: 159 TETQIKIWFQNRRTKWKRKYTS-DVETLASHYYA 191
>UNIPROTKB|Q2PYN8 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0051450 "myoblast proliferation" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 HSSP:P06601 GO:GO:0051450
CTD:10660 HOVERGEN:HBG006244 KO:K09353 EMBL:DQ294722
RefSeq:NP_001089192.1 UniGene:Xl.55973 ProteinModelPortal:Q2PYN8
GeneID:734237 KEGG:xla:734237 Xenbase:XB-GENE-6251676
Uniprot:Q2PYN8
Length = 267
Score = 140 (54.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 95 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 154
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKT--KQLEKDYDLLKRQ----YEAV----KAD 154
+ Q+A+ LGL QV WFQNRRA+ K ++++ D + K+ EAV + +
Sbjct: 155 ADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESTKKMSPSAVEAVLTISELE 214
Query: 155 REALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDI 205
+ N + + + L S + S + + + SE+ D+++D+
Sbjct: 215 ESGSERGNSRSRSPQLGLTSNHMPLSPSXPLTDQHASKECSEDEEDVEIDV 265
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 122 (48.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
GE KR +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 8 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 66
>UNIPROTKB|F1NMY3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104332
OMA:MERAQEV EMBL:AADN02070205 EMBL:AADN02070206 EMBL:AADN02027051
EMBL:AADN02027057 EMBL:AADN02027058 EMBL:AADN02027059
EMBL:AADN02027047 EMBL:AADN02027048 EMBL:AADN02027049
EMBL:AADN02027050 EMBL:AADN02027052 EMBL:AADN02027053
EMBL:AADN02027054 EMBL:AADN02027055 EMBL:AADN02027056
EMBL:AADN02027060 EMBL:AADN02027061 EMBL:AADN02027062
EMBL:AADN02027063 EMBL:AADN02027064 EMBL:AADN02027065
EMBL:AADN02027066 EMBL:AADN02027067 EMBL:AADN02027068
EMBL:AADN02027069 EMBL:AADN02070203 EMBL:AADN02070204
EMBL:AADN02073361 IPI:IPI00572938 Ensembl:ENSGALT00000028037
Uniprot:F1NMY3
Length = 240
Score = 137 (53.3 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 33/90 (36%), Positives = 53/90 (58%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 142 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 200
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQNQK 164
K+ KD ++ + K ++E L+ Q ++
Sbjct: 201 KENNKD------KFPSSKCEQEELEKQMER 224
>UNIPROTKB|I3L3R1 [details] [associations]
symbol:HOXB8 "Homeobox B8, isoform CRA_a" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471109
GO:GO:0000976 EMBL:AC103702 UniGene:Hs.514292 HGNC:HGNC:5119
SMR:I3L3R1 Ensembl:ENST00000576562 Uniprot:I3L3R1
Length = 242
Score = 137 (53.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 42/117 (35%), Positives = 63/117 (53%)
Query: 56 SGIDAGEEANGEDDFSDDGSQ---------AGEKKRRLNMEQVKTLE--KNFELGNKLEP 104
SG+ GEEA G + S +Q AG ++ R + +TLE K F L
Sbjct: 116 SGL--GEEAEGSEQ-SPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTR 172
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQ 161
+R+++++ ALGL RQV IWFQNRR +WK K+ KD ++ + K ++E L+ Q
Sbjct: 173 KRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------KFPSSKCEQEELEKQ 222
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/194 (27%), Positives = 89/194 (45%)
Query: 61 GEEANGEDDFSDDGSQAGEKKR--RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
G+ N D S+ + +KKR R Q++ LE F + +++ QL+R LGL P
Sbjct: 5 GDSQN--HDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAP 62
Query: 119 RQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVT 178
RQ+ WFQNRR + K + D LK + + ++ + A++ + HA + V
Sbjct: 63 RQIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIK--HAICPSCGDSPVN 120
Query: 179 ESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSVRPTVA 238
E +++ R EN+ ++ ++ R +I + P S +L P + V P
Sbjct: 121 EDSYFDEQ-----KLRIENAQ-LRDELERVSSIAAKFLGRPIS-HLPPLLNPMHVSPL-- 171
Query: 239 AQLFHNSSSSRPDL 252
+LFH S DL
Sbjct: 172 -ELFHTGPSLDFDL 184
>UNIPROTKB|P23459 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X57158
IPI:IPI00576774 PIR:I50145 RefSeq:NP_997060.1 UniGene:Gga.3187
ProteinModelPortal:P23459 SMR:P23459 GeneID:396301 KEGG:gga:396301
CTD:3234 NextBio:20816351 Uniprot:P23459
Length = 188
Score = 130 (50.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 31/90 (34%), Positives = 52/90 (57%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 94 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 152
Query: 136 QLEKD-YDLLKRQYEAVKADREALQAQNQK 164
+ KD + K++ + +A +E ++ +
Sbjct: 153 ENNKDKFPASKQEGKEGEAKKETHDLEDDR 182
>UNIPROTKB|F1RWG3 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:CU856160
Ensembl:ENSSSCT00000019091 Uniprot:F1RWG3
Length = 253
Score = 137 (53.3 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 42/117 (35%), Positives = 63/117 (53%)
Query: 56 SGIDAGEEANGEDDFSDDGSQ---------AGEKKRRLNMEQVKTLE--KNFELGNKLEP 104
SG+ GEEA G + S +Q AG ++ R + +TLE K F L
Sbjct: 131 SGL--GEEAEGSEQ-SPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTR 187
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQ 161
+R+++++ ALGL RQV IWFQNRR +WK K+ KD ++ + K ++E L+ Q
Sbjct: 188 KRRIEVSHALGLTERQVKIWFQNRRMKWK-KENNKD------KFPSSKCEQEELEKQ 237
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 139 (54.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/109 (33%), Positives = 56/109 (51%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +CAP+D+ A + + KRS S D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACAPRDYGRQALSPAEVEKRSGSKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 139 (54.0 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 37/109 (33%), Positives = 56/109 (51%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +CAP+D+ A + + KRS S D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACAPRDYGRQALSPAEVEKRSGSKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>ZFIN|ZDB-GENE-990415-4 [details] [associations]
symbol:hoxa11b "homeo box A11b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-4 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X EMBL:AF287137
EMBL:DQ060539 EMBL:Y07698 IPI:IPI00487877 RefSeq:NP_571222.1
UniGene:Dr.85393 ProteinModelPortal:Q9DDU1 SMR:Q9DDU1 GeneID:30382
KEGG:dre:30382 CTD:30382 InParanoid:Q9DDU1 NextBio:20806797
ArrayExpress:Q9DDU1 Uniprot:Q9DDU1
Length = 283
Score = 138 (53.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 65 NGEDDFSDDGSQAGEKKRRLNME----QVKTLEKNFELGNKLEPERKMQLARALGLQPRQ 120
N ED FS GS G+K R+ Q++ LE+ F + E+++QL+R L L RQ
Sbjct: 197 NNEDKFS--GSSNGQKTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQ 254
Query: 121 VAIWFQNRRARWKTKQLEKD 140
V IWFQNRR K K+L +D
Sbjct: 255 VKIWFQNRRM--KEKKLNRD 272
>RGD|1586210 [details] [associations]
symbol:Hoxc4 "homeo box C4" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0071837
"HMG box domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 120 (47.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK KD+D
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHD 71
>UNIPROTKB|P18865 [details] [associations]
symbol:Hoxc4 "Homeobox protein Hox-C4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1586210
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG305812 EMBL:M37567 IPI:IPI00195532
PIR:C43559 UniGene:Rn.12051 ProteinModelPortal:P18865 SMR:P18865
STRING:P18865 UCSC:RGD:1586210 Genevestigator:P18865 Uniprot:P18865
Length = 76
Score = 120 (47.3 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK KD+D
Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK-----KDHD 71
>MGI|MGI:96172 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IDA] [GO:0007501 "mesodermal cell fate specification"
evidence=IDA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0032993 "protein-DNA
complex" evidence=IDA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96172 GO:GO:0005737
GO:GO:0045893 GO:GO:0005730 GO:GO:0009952 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0060272 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:U20371 EMBL:U20370 EMBL:AK133481
EMBL:BC119302 IPI:IPI00133248 PIR:G37290 RefSeq:NP_034580.1
UniGene:Mm.26954 ProteinModelPortal:P31311 SMR:P31311 IntAct:P31311
MINT:MINT-1172550 STRING:P31311 PhosphoSite:P31311 PRIDE:P31311
Ensembl:ENSMUST00000048026 GeneID:15396 KEGG:mmu:15396
UCSC:uc009byn.1 GeneTree:ENSGT00700000104263 InParanoid:P31311
NextBio:288080 Bgee:P31311 CleanEx:MM_HOXA11 Genevestigator:P31311
GermOnline:ENSMUSG00000038210 Uniprot:P31311
Length = 313
Score = 130 (50.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED G Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 223 ESSSGHTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 282
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 283 RQVKIWFQNRRM--KEKKINRD 302
Score = 46 (21.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 5 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 47
>RGD|1564605 [details] [associations]
symbol:Hoxa11 "homeobox A11" species:10116 "Rattus norvegicus"
[GO:0001501 "skeletal system development" evidence=ISO] [GO:0001656
"metanephros development" evidence=ISO] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=ISO] [GO:0001759
"organ induction" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=ISO] [GO:0007501 "mesodermal cell fate
specification" evidence=ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISO] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0010720 "positive regulation
of cell development" evidence=ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=ISO] [GO:0032993 "protein-DNA
complex" evidence=ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048589 "developmental growth"
evidence=ISO] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=ISO] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1564605 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295 CTD:3207 KO:K09296
OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:CH474011 EMBL:AC122669
RefSeq:NP_001123350.1 RefSeq:XP_003749800.1 RefSeq:XP_003752232.1
RefSeq:XP_003753947.1 UniGene:Rn.224575 Ensembl:ENSRNOT00000010256
GeneID:100909443 GeneID:100911743 GeneID:368057 KEGG:rno:100909443
KEGG:rno:100911743 KEGG:rno:368057 NextBio:691993 Uniprot:G3V6Z0
Length = 313
Score = 130 (50.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED G Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 223 ESSSGHTEDKAGGSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 282
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 283 RQVKIWFQNRRM--KEKKINRD 302
Score = 46 (21.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 5 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 47
>UNIPROTKB|G5E5Q0 [details] [associations]
symbol:BARX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042637 "catagen"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001502
GO:GO:0000976 GeneTree:ENSGT00700000104097 GO:GO:0042637
GO:GO:0014902 OMA:TQEPKAR EMBL:DAAA02063278
Ensembl:ENSBTAT00000027509 Uniprot:G5E5Q0
Length = 216
Score = 133 (51.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 46/194 (23%), Positives = 93/194 (47%)
Query: 26 PTSLNPILPSCAPQDFHGVASFLGKR-SMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
PT ++ ++P+ P G+A L + + + +A E +G + + +KK R
Sbjct: 18 PTVISHLVPT-TP----GIAQVLSRHPATEAASAEAPGENHGSSESETEQPTPRQKKPRR 72
Query: 85 NME-----QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
+ Q+ LEK F+ L ++ LA++LGL QV W+QNRR +WK L+
Sbjct: 73 SRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKG 132
Query: 140 DYDLLKRQYEAVKADR----EALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRS 195
+ + K + E ++A+ +KL++++ S+E+ E ++ EG C +
Sbjct: 133 GQEAPTKPKGRPKKNSIPTSEEIEAE-EKLNSQV---HSQELLEP---SQSLEGLCDMQK 185
Query: 196 ENSSDIKLDISRTP 209
+ + ++++ +P
Sbjct: 186 PKARVVPVEVAESP 199
>ZFIN|ZDB-GENE-020117-2 [details] [associations]
symbol:gbx1 "gastrulation brain homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0060827 "regulation of canonical Wnt receptor
signaling pathway involved in neural plate anterior/posterior
pattern formation" evidence=IGI] [GO:0021555 "midbrain-hindbrain
boundary morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-020117-2 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 CTD:2636 eggNOG:NOG315879
HOGENOM:HOG000060099 HOVERGEN:HBG003967 KO:K09321 OMA:RQESPHS
OrthoDB:EOG4N5VXB GeneTree:ENSGT00660000095141 GO:GO:0021555
HSSP:P14653 EMBL:CT583690 EMBL:BC162948 EMBL:BC162949 EMBL:AF288763
IPI:IPI00506443 RefSeq:NP_777286.1 UniGene:Dr.81466 SMR:Q90ZB2
STRING:Q90ZB2 Ensembl:ENSDART00000105572 GeneID:142985
KEGG:dre:142985 InParanoid:Q90ZB2 NextBio:20797048 GO:GO:0060827
Uniprot:Q90ZB2
Length = 316
Score = 138 (53.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 33/81 (40%), Positives = 40/81 (49%)
Query: 56 SGIDAGEEANGEDDFSDDGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLAR 112
S G+ G D G AG+ +RR EQ+ LEK F L + Q+A
Sbjct: 190 SASQKGKLKGGSQDALPPGGSAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAH 249
Query: 113 ALGLQPRQVAIWFQNRRARWK 133
AL L QV IWFQNRRA+WK
Sbjct: 250 ALKLSEVQVKIWFQNRRAKWK 270
>UNIPROTKB|E2RQ19 [details] [associations]
symbol:HOXB8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0007625 "grooming behavior"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0019233 GO:GO:0008344 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0021516
GeneTree:ENSGT00700000104332 OMA:MERAQEV EMBL:AAEX03006516
Ensembl:ENSCAFT00000026696 NextBio:20863956 Uniprot:E2RQ19
Length = 242
Score = 135 (52.6 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 143 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 201
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQ 161
K+ KD ++ + K ++E L+ Q
Sbjct: 202 KENNKD------KFPSSKCEQEELEKQ 222
>UNIPROTKB|P17481 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007625 "grooming
behavior" evidence=IEA] [GO:0008344 "adult locomotory behavior"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0007275 "multicellular organismal
development" evidence=NAS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0009952 GO:GO:0019233 GO:GO:0008344
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704
GO:GO:0000976 GO:GO:0007625 GO:GO:0045638 GO:GO:0021516
HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V EMBL:AY014294
EMBL:AY014293 EMBL:X16173 IPI:IPI00014536 PIR:B37042
RefSeq:NP_076921.1 UniGene:Hs.514292 ProteinModelPortal:P17481
SMR:P17481 STRING:P17481 PhosphoSite:P17481 DMDM:20141506
PRIDE:P17481 DNASU:3218 Ensembl:ENST00000239144 GeneID:3218
KEGG:hsa:3218 UCSC:uc002inw.3 CTD:3218 GeneCards:GC17M046688
HGNC:HGNC:5119 MIM:142963 neXtProt:NX_P17481 PharmGKB:PA29395
InParanoid:P17481 KO:K09308 OMA:MERAQEV GenomeRNAi:3218
NextBio:12804 Bgee:P17481 CleanEx:HS_HOXB8 Genevestigator:P17481
GermOnline:ENSG00000120068 Uniprot:P17481
Length = 243
Score = 135 (52.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQ 161
K+ KD ++ + K ++E L+ Q
Sbjct: 203 KENNKD------KFPSSKCEQEELEKQ 223
>UNIPROTKB|Q0P4H6 [details] [associations]
symbol:lbx1 "Transcription factor LBX1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007517 "muscle organ development"
evidence=ISS] [GO:0051450 "myoblast proliferation" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0007517 GO:GO:0000976 GO:GO:0051450 CTD:10660
HOVERGEN:HBG006244 KO:K09353 EMBL:BC122077 RefSeq:NP_001072559.1
UniGene:Str.53738 ProteinModelPortal:Q0P4H6 GeneID:780014
KEGG:xtr:780014 Xenbase:XB-GENE-6455157 Uniprot:Q0P4H6
Length = 265
Score = 136 (52.9 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 52/178 (29%), Positives = 82/178 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+++ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESVKKMSPS 200
Query: 165 LHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTSR 222
++ + E+ E N ++ S S + S + L +P+ SP++ TS+
Sbjct: 201 TVEAVLTIS--ELEEETNSVRDDSRSRSPQLGLSGHMPL----SPS--SPLTEQHTSK 250
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 136 (52.9 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 41/136 (30%), Positives = 62/136 (45%)
Query: 12 NFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFS 71
N L+ P D P + HG+++ S A E + + + S
Sbjct: 61 NLPLKNPFYDNSDNPYTRWLATTDSIQYSLHGLSANSQDTSAKSPEPSADESPDNDKETS 120
Query: 72 DDGSQAGEK-KRRLNMEQVKT--LEKNFELGNKLE-PERKMQLARALGLQPRQVAIWFQN 127
+GS +G+K KRR+ + +T LE+ F L PER+ LA + L P QV IWFQN
Sbjct: 121 SNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQN 179
Query: 128 RRARWKTKQLEKDYDL 143
R + K + EK ++
Sbjct: 180 HRYKMKRARAEKGMEV 195
>UNIPROTKB|P14838 [details] [associations]
symbol:HOXB5 "Homeobox protein Hox-B5" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104189
eggNOG:NOG305812 EMBL:X16846 IPI:IPI00570687 PIR:S08302
UniGene:Gga.22931 ProteinModelPortal:P14838 SMR:P14838
STRING:P14838 Ensembl:ENSGALT00000029223 ArrayExpress:P14838
Uniprot:P14838
Length = 82
Score = 118 (46.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 28/71 (39%), Positives = 35/71 (49%)
Query: 73 DGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
DG +A R Q LEK F L R++++A AL L RQ+ IWFQNRR +W
Sbjct: 6 DGKRARTAYTRY---QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKW 62
Query: 133 KTKQLEKDYDL 143
K K L
Sbjct: 63 KKDNKLKSMSL 73
>WB|WBGene00000434 [details] [associations]
symbol:ceh-9 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 EMBL:FO081483
EMBL:X52811 PIR:S13129 RefSeq:NP_001021797.1 UniGene:Cel.30778
ProteinModelPortal:P56407 SMR:P56407 EnsemblMetazoa:Y65B4BR.9
GeneID:267057 KEGG:cel:CELE_Y65B4BR.9 UCSC:Y65B4BR.9 CTD:267057
WormBase:Y65B4BR.9 eggNOG:NOG237842 InParanoid:P56407 OMA:FSGKQVF
NextBio:953494 Uniprot:P56407
Length = 147
Score = 118 (46.6 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 80 KKRRLNM--EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 137
KK R +QV LEK FE L + +LA+ L + QV IWFQNRR +WK +
Sbjct: 71 KKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIES 130
Query: 138 EKD 140
EK+
Sbjct: 131 EKE 133
>MGI|MGI:96109 [details] [associations]
symbol:Hlx "H2.0-like homeobox" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IGI;IMP] [GO:0045629 "negative regulation
of T-helper 2 cell differentiation" evidence=IGI;IMP] [GO:0046622
"positive regulation of organ growth" evidence=IMP] [GO:0048484
"enteric nervous system development" evidence=IMP] [GO:0048513
"organ development" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96109 GO:GO:0005634 GO:GO:0030154
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GeneTree:ENSGT00700000104097 GO:GO:0045629 GO:GO:0007519
GO:GO:0045627 GO:GO:0048557 CTD:3142 eggNOG:NOG331357
HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339 OMA:AHPHASF
OrthoDB:EOG473PRM EMBL:X58250 IPI:IPI00123711 PIR:A39621
RefSeq:NP_032276.1 UniGene:Mm.1347 ProteinModelPortal:Q61670
SMR:Q61670 STRING:Q61670 PRIDE:Q61670 Ensembl:ENSMUST00000048572
GeneID:15284 KEGG:mmu:15284 InParanoid:Q61670 NextBio:287919
Bgee:Q61670 CleanEx:MM_HLX Genevestigator:Q61670
GermOnline:ENSMUSG00000039377 Uniprot:Q61670
Length = 476
Score = 140 (54.3 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 51/154 (33%), Positives = 80/154 (51%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARWK-TK----QLEKDY 141
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W+ +K Q +KD
Sbjct: 284 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDK 342
Query: 142 DLLKRQYEAVKAD--REALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSS 199
+ ++ V A+ RE + AE + S + + + + TEG+ RS + +
Sbjct: 343 EAGEKPSGGVPAEGEREERSPSRSEGEAESESSDSESLDMAPSDTERTEGT--ERSLHQT 400
Query: 200 DIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSV 233
+ + S A+ + S+ TS + F STSS+
Sbjct: 401 TV-IKASAAGALITASSS--TSGSSFSFSSTSSL 431
>UNIPROTKB|F1NE14 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00682592
Ensembl:ENSGALT00000018035 Uniprot:F1NE14
Length = 169
Score = 122 (48.0 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 36/96 (37%), Positives = 47/96 (48%)
Query: 54 SFSGIDAGEEANGEDDFSDDGSQAGE-------KKRRL--NMEQVKTLEKNFELGNKLEP 104
+FS + EANGE D + A +K+R Q LEK F L
Sbjct: 71 AFSENNGESEANGEKPHIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTR 130
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+R+ ++AR L L RQV IWFQNRR K K++ KD
Sbjct: 131 DRRYEVARLLNLTERQVKIWFQNRRM--KMKKINKD 164
>UNIPROTKB|Q98924 [details] [associations]
symbol:HOXA9 "Homeobox protein Hox-A9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR006711 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG286554
HOVERGEN:HBG016849 HOGENOM:HOG000231180 EMBL:X97750 IPI:IPI00583350
UniGene:Gga.649 ProteinModelPortal:Q98924 SMR:Q98924 STRING:Q98924
InParanoid:Q98924 Uniprot:Q98924
Length = 169
Score = 122 (48.0 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 36/96 (37%), Positives = 47/96 (48%)
Query: 54 SFSGIDAGEEANGEDDFSDDGSQAGE-------KKRRL--NMEQVKTLEKNFELGNKLEP 104
+FS + EANGE D + A +K+R Q LEK F L
Sbjct: 71 AFSENNGESEANGEKPHIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTR 130
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+R+ ++AR L L RQV IWFQNRR K K++ KD
Sbjct: 131 DRRYEVARLLNLTERQVKIWFQNRRM--KMKKINKD 164
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 44/161 (27%), Positives = 77/161 (47%)
Query: 30 NPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKR--RLNME 87
NP P P++ + V S + S +G +G + E+ + A +KKR R
Sbjct: 42 NPNFPYIFPKEEYEVMSKIESGSGKSTG--SGHDPV-ENTAIEQEPPAAKKKRYHRHTAS 98
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQ 147
Q++ +E F+ + + +++L++ LGL P QV WFQN+R + K +Q D LK +
Sbjct: 99 QIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAE 158
Query: 148 YEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETE 188
E +K + + +Q+ Q L R E+ L +E +
Sbjct: 159 NETLKTESQNIQSNFQCLFCSTCGHNLR--LENARLRQELD 197
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEI---MALKSREVTESINLNKETEGSCSNRSENSS 199
K + +++ + Q Q L +E +L S + + S ++ E S S+
Sbjct: 204 NKKDELDSLDTSCD----QGQDLPSEQNKGASLDSSQCSPSPASPEDPESEISEDSDQEV 259
Query: 200 DIKLD 204
DI+ D
Sbjct: 260 DIEGD 264
>UNIPROTKB|J9NWE8 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 EMBL:AAEX03009390
RefSeq:XP_864544.1 Ensembl:ENSCAFT00000046660 GeneID:482368
KEGG:cfa:482368 Uniprot:J9NWE8
Length = 442
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 10 PTNFMLQTPHEDEHQTPTSL--NPIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN 65
P + + + + TP S +P+L P+ A Q F + SG +GE
Sbjct: 122 PPSSVSPPQNASSNPTPASAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSGSSSGESCA 181
Query: 66 GEDDFSDDGSQAGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAI 123
G D S G QA K+ R Q+ LEK F L R++++A L L RQ+ I
Sbjct: 182 G--DKSPPG-QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 238
Query: 124 WFQNRRARWKTKQLEK 139
WFQNRR ++K Q K
Sbjct: 239 WFQNRRMKYKKDQKGK 254
>UNIPROTKB|F1SHT1 [details] [associations]
symbol:HOXA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0060017 "parathyroid gland
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048645 "organ formation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0021615 "glossopharyngeal
nerve morphogenesis" evidence=IEA] [GO:0010159 "specification of
organ position" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0001974 "blood
vessel remodeling" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615
EMBL:CU570959 RefSeq:XP_003134890.1 Ensembl:ENSSSCT00000018186
GeneID:100519809 KEGG:ssc:100519809 Uniprot:F1SHT1
Length = 443
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/136 (32%), Positives = 62/136 (45%)
Query: 10 PTNFMLQTPHEDEHQTPTSL--NPIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN 65
P + + + + TP S +P+L P+ A Q F + SG +GE
Sbjct: 121 PPSSVSPPQNASSNPTPASAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSGSSSGESCA 180
Query: 66 GEDDFSDDGSQAGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAI 123
G D S G QA K+ R Q+ LEK F L R++++A L L RQ+ I
Sbjct: 181 G--DKSPPG-QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKI 237
Query: 124 WFQNRRARWKTKQLEK 139
WFQNRR ++K Q K
Sbjct: 238 WFQNRRMKYKKDQKGK 253
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 136 (52.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/109 (33%), Positives = 55/109 (50%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +CAP D+ A + + KRS S D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACAPGDYGRQALSPADVEKRSGSKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|G3V815 [details] [associations]
symbol:Hoxc10 "Homeo box C10, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0050905
"neuromuscular process" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1307250 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH474035 KO:K09295
GeneTree:ENSGT00700000104054 CTD:3226 OMA:CGVMRGC EMBL:AC116663
RefSeq:XP_003750462.1 RefSeq:XP_003754408.1
Ensembl:ENSRNOT00000021647 GeneID:315338 KEGG:rno:315338
Uniprot:G3V815
Length = 342
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/125 (32%), Positives = 60/125 (48%)
Query: 16 QTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-G 74
QTP +E +T SL + P +P + + S S +A EE E+ +
Sbjct: 207 QTPSPNEIKTEQSL--VGPKASPSESEKERAKTADSSPDTSDNEAKEEIKAENTTGNWLT 264
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++ + L RQV IWFQNRR + K
Sbjct: 265 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 324
Query: 134 TKQLE 138
E
Sbjct: 325 KMNRE 329
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 49 GKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKM 108
GKR S D+ +E N + S+ S+ +++ EQ++ LE F N L R+
Sbjct: 15 GKRKSDSS--DS-QEGNYK---SEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRLRRY 68
Query: 109 QLARALGLQPRQVAIWFQNRRARWK 133
++A L L RQV +WFQNRR +WK
Sbjct: 69 EIAVNLDLTERQVKVWFQNRRMKWK 93
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/58 (46%), Positives = 33/58 (56%)
Query: 79 EKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
E++RR EQ+ LEK F L + Q+A AL L QV IWFQNRRA+WK
Sbjct: 1 ERRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 58
>UNIPROTKB|P09078 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9823 "Sus
scrofa" [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0045638 EMBL:X06668 ProteinModelPortal:P09078 SMR:P09078
Uniprot:P09078
Length = 93
Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 136
Q LEK F+ L +R ++++ ALGL RQ+ IWFQNRR +WK ++
Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/117 (33%), Positives = 68/117 (58%)
Query: 49 GKRSMSFSGIDAGEEANGED-DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERK 107
G+ S S D E +G+D D SD + ++ R +Q++ LE F+ + +++
Sbjct: 81 GEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQR 140
Query: 108 MQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD-LLKRQYEAVKAD----REALQ 159
+ L+R L L PRQV WFQNRR + KT Q+E+ + LL+++ + ++A+ REA++
Sbjct: 141 LDLSRRLNLDPRQVKFWFQNRRTQMKT-QIERHENALLRQENDKLRAENMSVREAMR 196
>UNIPROTKB|F1S9I5 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0046622 "positive
regulation of organ growth" evidence=IEA] [GO:0045629 "negative
regulation of T-helper 2 cell differentiation" evidence=IEA]
[GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0008284 GO:GO:0001889 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 OMA:ESTQAPL
EMBL:CU855622 Ensembl:ENSSSCT00000011848 Uniprot:F1S9I5
Length = 245
Score = 133 (51.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/109 (39%), Positives = 58/109 (53%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 45 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDK 103
Query: 144 L---KRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLN-KETE 188
K AV AD E + + AE + S +ES+++ +TE
Sbjct: 104 EAGEKPSGGAVAADGEPEERSPSRSEAEAESESSD--SESLDMTPSDTE 150
>UNIPROTKB|Q08DG7 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9913 "Bos
taurus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0060017
"parathyroid gland development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0021615 "glossopharyngeal nerve morphogenesis" evidence=IEA]
[GO:0010159 "specification of organ position" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001974 "blood vessel remodeling"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0008284
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001974 GO:GO:0051216 GO:GO:0048538 GO:GO:0048645
GO:GO:0048704 GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 EMBL:BC123759 IPI:IPI00693889
RefSeq:NP_001070293.1 UniGene:Bt.87350 ProteinModelPortal:Q08DG7
SMR:Q08DG7 PRIDE:Q08DG7 Ensembl:ENSBTAT00000010700 GeneID:509991
KEGG:bta:509991 CTD:3200 InParanoid:Q08DG7 NextBio:20869233
GO:GO:0021615 Uniprot:Q08DG7
Length = 442
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 43/121 (35%), Positives = 57/121 (47%)
Query: 25 TPTSL--NPIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEK 80
TP S +P+L P+ A Q F + SG +GE G D S G QA K
Sbjct: 136 TPASAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSGSSSGESCAG--DKSPPG-QASSK 192
Query: 81 KRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE 138
+ R Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q
Sbjct: 193 RARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKG 252
Query: 139 K 139
K
Sbjct: 253 K 253
>ZFIN|ZDB-GENE-001206-2 [details] [associations]
symbol:lbx2 "ladybird homeobox homolog 2
(Drosophila)" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0055001
"muscle cell development" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001206-2 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0055001
HSSP:P13297 HOVERGEN:HBG006244 EMBL:AJ295165 IPI:IPI00511662
UniGene:Dr.27181 ProteinModelPortal:Q9DD91 InParanoid:Q9DD91
Uniprot:Q9DD91
Length = 257
Score = 133 (51.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G + + G + KKRR + Q+ LEK F L P
Sbjct: 94 SKTFKGLEVSVIQAAEGREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFWYQKYLSP 153
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKA-DREALQ 159
+ Q+A+ LGL QV WFQNRRA+ L++D + +K E++K +ALQ
Sbjct: 154 ADRDQIAQQLGLTNAQVITWFQNRRAK-----LKRDLEEMKADVESLKKIPPQALQ 204
>UNIPROTKB|F1NVN6 [details] [associations]
symbol:MNR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AADN02016763 IPI:IPI00586200
Ensembl:ENSGALT00000018518 OMA:MAVEPEK Uniprot:F1NVN6
Length = 158
Score = 116 (45.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLL-- 144
+Q+ LE F+L L ++ ++A +L L QV IWFQNRR +WK + K+ +
Sbjct: 21 QQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAKEQGMAVE 80
Query: 145 -KRQYEAVKADREALQAQNQKLHA---EIMALKSRE--VTESINLNKETEGSCSNRSENS 198
++ KAD L +Q Q E + + S L + + SCS E+
Sbjct: 81 PEKPRGLGKADESLLPSQPQGQAGDSPEFVGCSPGTGFLCRSAELGYDPDSSCSGGEEDE 140
Query: 199 SD 200
+
Sbjct: 141 EE 142
>UNIPROTKB|P14839 [details] [associations]
symbol:HOXB6 "Homeobox protein Hox-B6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:X16847 IPI:IPI00589688
PIR:S08303 ProteinModelPortal:P14839 SMR:P14839 Uniprot:P14839
Length = 84
Score = 116 (45.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 74 GSQAGEKKR-RLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
GS G +R R + +TLE K F L R++++A +L L RQ+ IWFQNRR
Sbjct: 1 GSSFGPARRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRM 60
Query: 131 RWK 133
+WK
Sbjct: 61 KWK 63
>UNIPROTKB|E1C1I8 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104263 EMBL:AADN02000990 EMBL:AADN02000991
EMBL:AADN02000992 EMBL:AADN02000993 IPI:IPI00818363
Ensembl:ENSGALT00000037817 ArrayExpress:E1C1I8 Uniprot:E1C1I8
Length = 203
Score = 129 (50.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 51 RSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQL 110
R S S ++ N E S G + +K+ Q++ LE+ F + E+++QL
Sbjct: 105 RPESGSSPESSSGNNEEKSGSSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQL 164
Query: 111 ARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+R L L RQV IWFQNRR K K++ +D
Sbjct: 165 SRMLNLTDRQVKIWFQNRRM--KEKKINRD 192
>MGI|MGI:96189 [details] [associations]
symbol:Hoxb8 "homeobox B8" species:10090 "Mus musculus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=IMP]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0019233 "sensory perception of pain" evidence=IMP] [GO:0021516
"dorsal spinal cord development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IDA]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96189 GO:GO:0005634
GO:GO:0009952 GO:GO:0019233 GO:GO:0008344 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0048704 GO:GO:0000976
GO:GO:0007625 GO:GO:0045638 GO:GO:0021516 HOVERGEN:HBG016849
GeneTree:ENSGT00700000104332 eggNOG:NOG314669 OrthoDB:EOG4H464V
CTD:3218 KO:K09308 OMA:MERAQEV EMBL:X13961 EMBL:X13721 EMBL:M18399
EMBL:X54077 IPI:IPI00108997 PIR:S03712 RefSeq:NP_034591.1
UniGene:Mm.4822 ProteinModelPortal:P09632 SMR:P09632 DIP:DIP-35618N
IntAct:P09632 STRING:P09632 PhosphoSite:P09632 PRIDE:P09632
Ensembl:ENSMUST00000052650 Ensembl:ENSMUST00000168043 GeneID:15416
KEGG:mmu:15416 InParanoid:P09632 NextBio:288150 Bgee:P09632
CleanEx:MM_HOXB8 Genevestigator:P09632
GermOnline:ENSMUSG00000056648 Uniprot:P09632
Length = 243
Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQ 161
K+ KD ++ + K ++E L+ +
Sbjct: 203 KENNKD------KFPSSKCEQEELEKE 223
>UNIPROTKB|G3V6Y1 [details] [associations]
symbol:Hoxb8 "Homeo box B8 (Mapped)" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007625
"grooming behavior" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1586211 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473948
GeneTree:ENSGT00700000104332 CTD:3218 KO:K09308 OMA:MERAQEV
UniGene:Rn.231433 RefSeq:NP_001178578.1 ProteinModelPortal:G3V6Y1
SMR:G3V6Y1 Ensembl:ENSRNOT00000009986 GeneID:24457 KEGG:rno:24457
NextBio:603373 Uniprot:G3V6Y1
Length = 243
Score = 132 (51.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/87 (36%), Positives = 51/87 (58%)
Query: 77 AGEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
AG ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK
Sbjct: 144 AGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK- 202
Query: 135 KQLEKDYDLLKRQYEAVKADREALQAQ 161
K+ KD ++ + K ++E L+ +
Sbjct: 203 KENNKD------KFPSSKCEQEELEKE 223
>UNIPROTKB|G1K364 [details] [associations]
symbol:LOC100858967 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
UniGene:Gga.957 OMA:GGCRETA NextBio:20815412 InterPro:IPR021918
Pfam:PF12045 GeneTree:ENSGT00700000104263 EMBL:AADN02000990
EMBL:AADN02000991 EMBL:AADN02000992 EMBL:AADN02000993
Ensembl:ENSGALT00000037819 Uniprot:G1K364
Length = 296
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 43 GVASFLGK--RSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNME----QVKTLEKNF 96
G A+ GK R SG + E ++G ++ GS +G++ R+ Q++ LE+ F
Sbjct: 186 GAAAAAGKERRRRPESG-SSPESSSGNNE-EKSGSSSGQRTRKKRCPYTKYQIRELEREF 243
Query: 97 ELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+ E+++QL+R L L RQV IWFQNRR K K++ +D
Sbjct: 244 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KEKKINRD 285
>UNIPROTKB|P31258 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007501 "mesodermal cell
fate specification" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0032332 GO:GO:0048589 GO:GO:0032993
GO:GO:0001759 EMBL:M81250 IPI:IPI00585648 RefSeq:NP_989950.1
RefSeq:XP_003640756.1 RefSeq:XP_003640763.1 UniGene:Gga.957
ProteinModelPortal:P31258 SMR:P31258 STRING:P31258 GeneID:100858967
GeneID:100859078 GeneID:395327 KEGG:gga:100858967
KEGG:gga:100859078 KEGG:gga:395327 CTD:3207 eggNOG:NOG274734
HOGENOM:HOG000231898 HOVERGEN:HBG052048 InParanoid:P31258 KO:K09296
OMA:GGCRETA NextBio:20815412 ArrayExpress:P31258 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 Uniprot:P31258
Length = 297
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/104 (34%), Positives = 57/104 (54%)
Query: 43 GVASFLGK--RSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNME----QVKTLEKNF 96
G A+ GK R SG + E ++G ++ GS +G++ R+ Q++ LE+ F
Sbjct: 187 GAAAAAGKERRRRPESG-SSPESSSGNNE-EKSGSSSGQRTRKKRCPYTKYQIRELEREF 244
Query: 97 ELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+ E+++QL+R L L RQV IWFQNRR K K++ +D
Sbjct: 245 FFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRM--KEKKINRD 286
>UNIPROTKB|F8VSA3 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC009336 IPI:IPI01018181
HGNC:HGNC:5139 ProteinModelPortal:F8VSA3 SMR:F8VSA3
Ensembl:ENST00000548663 ArrayExpress:F8VSA3 Bgee:F8VSA3
Uniprot:F8VSA3
Length = 186
Score = 126 (49.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/90 (32%), Positives = 52/90 (57%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K
Sbjct: 92 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 150
Query: 136 QLEKD-YDLLKRQYEAVKADREALQAQNQK 164
+ KD + + +++ + + +EA + + +
Sbjct: 151 ENNKDKFPVSRQEVKDGETKKEAQELEEDR 180
>MGI|MGI:96185 [details] [associations]
symbol:Hoxb4 "homeobox B4" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048103 "somatic
stem cell division" evidence=IDA] [GO:0048536 "spleen development"
evidence=IMP] [GO:0048539 "bone marrow development" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048705 "skeletal system morphogenesis" evidence=IGI;IMP]
[GO:0060216 "definitive hemopoiesis" evidence=IGI] [GO:0060218
"hematopoietic stem cell differentiation" evidence=ISO] [GO:2000738
"positive regulation of stem cell differentiation" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96185 GO:GO:0005634 GO:GO:0009952 GO:GO:0003677
GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 OMA:RYAACRD GO:GO:0048539 EMBL:M36654
EMBL:AK133945 EMBL:BC095947 IPI:IPI00109338 PIR:A31757
RefSeq:NP_034589.3 UniGene:Mm.3546 ProteinModelPortal:P10284
SMR:P10284 IntAct:P10284 STRING:P10284 PhosphoSite:P10284
PRIDE:P10284 Ensembl:ENSMUST00000049241 GeneID:15412 KEGG:mmu:15412
InParanoid:P10284 NextBio:288134 Bgee:P10284 CleanEx:MM_HOXB4
Genevestigator:P10284 GermOnline:ENSMUSG00000038692 Uniprot:P10284
Length = 250
Score = 132 (51.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGEDDFSDDGSQ 76
P + S +P P CA H S K + + + + +++ G +
Sbjct: 103 PEPGQRSEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA--GGE 160
Query: 77 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+ +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 161 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>UNIPROTKB|F6Q274 [details] [associations]
symbol:F6Q274 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
OrthoDB:EOG4TTGJP EMBL:CU498958 Ensembl:ENSSSCT00000011554
OMA:CGSEDED Uniprot:F6Q274
Length = 280
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/131 (33%), Positives = 61/131 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM----EQVKTLEKNFELGNKLEPE 105
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTFTNHQIYELEKRFLYQKYLSPA 152
Query: 106 RKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKL 165
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 DRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESPKKLGPSG 200
Query: 166 HAEIMALKSRE 176
+I+AL E
Sbjct: 201 QMDIVALAELE 211
>UNIPROTKB|J9NYL4 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG EMBL:AAEX03015474
RefSeq:XP_543979.1 Ensembl:ENSCAFT00000047871 GeneID:486850
KEGG:cfa:486850 Uniprot:J9NYL4
Length = 281
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>UNIPROTKB|P52954 [details] [associations]
symbol:LBX1 "Transcription factor LBX1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0021920
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord association neuron specification"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048664 "neuron fate
determination" evidence=IEA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0008285
EMBL:CH471066 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0009653 GO:GO:0000976 eggNOG:NOG240187
GO:GO:0048664 EMBL:X90828 EMBL:AL135794 EMBL:BC069156 EMBL:BC136321
IPI:IPI00006058 RefSeq:NP_006553.2 UniGene:Hs.37128
ProteinModelPortal:P52954 SMR:P52954 STRING:P52954 DMDM:117949813
PRIDE:P52954 Ensembl:ENST00000370193 GeneID:10660 KEGG:hsa:10660
UCSC:uc001ksx.3 CTD:10660 GeneCards:GC10M102976 HGNC:HGNC:16960
HPA:HPA002086 MIM:604255 neXtProt:NX_P52954 PharmGKB:PA142671561
HOGENOM:HOG000007247 HOVERGEN:HBG006244 InParanoid:P52954 KO:K09353
OMA:NSEATAG OrthoDB:EOG4TTGJP GenomeRNAi:10660 NextBio:40539
ArrayExpress:P52954 Bgee:P52954 CleanEx:HS_LBX1
Genevestigator:P52954 GermOnline:ENSG00000138136 GO:GO:0021920
Uniprot:P52954
Length = 281
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>UNIPROTKB|D7R811 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00700000104206
CTD:10660 KO:K09353 OMA:NSEATAG OrthoDB:EOG4TTGJP EMBL:CU469143
EMBL:HM044216 RefSeq:NP_001193265.1 UniGene:Ssc.101871
Ensembl:ENSSSCT00000031910 GeneID:100155030 KEGG:ssc:100155030
Uniprot:D7R811
Length = 281
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>UNIPROTKB|E1BC20 [details] [associations]
symbol:LBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048664 "neuron fate determination" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0001947
GO:GO:0000976 GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
KO:K09353 OMA:NSEATAG GO:GO:0021920 EMBL:DAAA02058980
IPI:IPI00685675 RefSeq:NP_001179743.1 UniGene:Bt.54498
Ensembl:ENSBTAT00000032902 GeneID:534470 KEGG:bta:534470
NextBio:20876409 Uniprot:E1BC20
Length = 282
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>MGI|MGI:104867 [details] [associations]
symbol:Lbx1 "ladybird homeobox homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001947
"heart looping" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048664 "neuron fate determination"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:104867
GO:GO:0008285 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007517
GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OMA:NSEATAG
OrthoDB:EOG4TTGJP GO:GO:0021920 EMBL:X90829 EMBL:AB108497
EMBL:BC119177 EMBL:BC120586 EMBL:AK144562 IPI:IPI00132589
RefSeq:NP_034821.2 UniGene:Mm.116815 ProteinModelPortal:P52955
SMR:P52955 IntAct:P52955 STRING:P52955 PRIDE:P52955
Ensembl:ENSMUST00000099401 GeneID:16814 KEGG:mmu:16814
UCSC:uc008hqv.1 InParanoid:P52955 NextBio:290692 Bgee:P52955
CleanEx:MM_LBX1 Genevestigator:P52955 GermOnline:ENSMUSG00000025216
Uniprot:P52955
Length = 282
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>ZFIN|ZDB-GENE-080204-54 [details] [associations]
symbol:hmx1 "H6 homeo box 1" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0043010 "camera-type
eye development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-080204-54 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0043010
GeneTree:ENSGT00700000104333 EMBL:AL929576 EMBL:EU203551
IPI:IPI00884721 UniGene:Dr.45660 Ensembl:ENSDART00000113087
HOVERGEN:HBG101086 Uniprot:B2KTE5
Length = 282
Score = 133 (51.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/112 (33%), Positives = 55/112 (49%)
Query: 51 RSMSFSGIDAGEEAN------GEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLE 103
R MS +D G++A D S+ GS +K R + + QV LE F++ L
Sbjct: 117 RKMSGCAVDEGDDARQLFDERSGPDTSEPGSARKKKTRTVFSRSQVFQLESTFDMKRYLS 176
Query: 104 PERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADR 155
+ LA +L L QV IWFQNRR +WK +QL D + + + + + R
Sbjct: 177 SSERAGLAASLHLTETQVKIWFQNRRNKWK-RQLAADLEAVNFNHNSQRIVR 227
>RGD|1564197 [details] [associations]
symbol:Lbx1 "ladybird homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001947 "heart
looping" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0021920 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord association neuron
specification" evidence=IEA;ISO] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0048663 "neuron
fate commitment" evidence=ISO] [GO:0048664 "neuron fate
determination" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1564197 GO:GO:0008285 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007517 GO:GO:0001947 GO:GO:0000976 eggNOG:NOG240187
GeneTree:ENSGT00700000104206 GO:GO:0048664 CTD:10660
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 OrthoDB:EOG4TTGJP
GO:GO:0021920 EMBL:AB197923 IPI:IPI00392001 RefSeq:NP_001040573.1
UniGene:Rn.194904 ProteinModelPortal:Q1XID0 PRIDE:Q1XID0
Ensembl:ENSRNOT00000021748 GeneID:499362 KEGG:rno:499362
NextBio:702666 Genevestigator:Q1XID0 Uniprot:Q1XID0
Length = 285
Score = 133 (51.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ + A G D + G + KKRR + Q+ LEK F L P
Sbjct: 93 SKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSP 152
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQK 164
+ Q+A+ LGL QV WFQNRRA+ LKR E +KAD E+ +
Sbjct: 153 ADRDQIAQQLGLTNAQVITWFQNRRAK------------LKRDLEEMKADVESAKKLGPS 200
Query: 165 LHAEIMALKSRE 176
+I+AL E
Sbjct: 201 GQMDIVALAELE 212
>ZFIN|ZDB-GENE-050309-27 [details] [associations]
symbol:lbx1b "ladybird homeobox 1b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050309-27 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 EMBL:CR855357 EMBL:CT573247
IPI:IPI00866445 RefSeq:NP_001156784.1 UniGene:Dr.109231
Ensembl:ENSDART00000007770 GeneID:793810 KEGG:dre:793810 CTD:793810
NextBio:20931589 Bgee:E7FDX5 Uniprot:E7FDX5
Length = 265
Score = 132 (51.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 38/109 (34%), Positives = 56/109 (51%)
Query: 52 SMSFSGIDAG--EEANGEDDFSDDGSQAGEKKRRLNM-----EQVKTLEKNFELGNKLEP 104
S +F G++ G + A G+D G + KKRR + Q+ LEK F L P
Sbjct: 89 SKTFKGLELGVLQAAEGKDGLKLFGQRDSPKKRRKSRTAFTNHQLYELEKRFLHQKYLSP 148
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKA 153
+ Q+A LGL QV WFQNRRA+ L++D + +K E+V++
Sbjct: 149 ADRDQIAHQLGLTNAQVITWFQNRRAK-----LKRDLEEMKADVESVRS 192
>MGI|MGI:96175 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10090 "Mus musculus"
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0010159 "specification of organ
position" evidence=IGI] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IGI;IMP] [GO:0030878 "thyroid gland
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI;IMP] [GO:0048645 "organ formation" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060017
"parathyroid gland development" evidence=IGI] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 MGI:MGI:96175
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 OMA:HIQGSPV OrthoDB:EOG4K6G4J
InterPro:IPR025281 Pfam:PF13293 CTD:3200 GO:GO:0021615 EMBL:Y11717
EMBL:BC096612 EMBL:U56399 EMBL:K02591 IPI:IPI00113737 PIR:I49746
RefSeq:NP_034582.1 UniGene:Mm.159945 UniGene:Mm.483277
ProteinModelPortal:P02831 SMR:P02831 STRING:P02831
PhosphoSite:P02831 PRIDE:P02831 Ensembl:ENSMUST00000114434
GeneID:15400 KEGG:mmu:15400 UCSC:uc009bya.2 InParanoid:P02831
NextBio:288094 Bgee:P02831 CleanEx:MM_HOXA3 Genevestigator:P02831
GermOnline:ENSMUSG00000059723 Uniprot:P02831
Length = 443
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 21 DEHQTP--TSLNPIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQ 76
+ + TP T+ +P+L P+ Q F + SG +GE G D S G Q
Sbjct: 133 NSNPTPASTAKSPLLNSPTVGKQIFPWMKESRQNTKQKTSGSSSGESCAG--DKSPPG-Q 189
Query: 77 AGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
A K+ R Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K
Sbjct: 190 ASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 249
Query: 135 KQLEK 139
Q K
Sbjct: 250 DQKGK 254
>RGD|1561431 [details] [associations]
symbol:Hoxa3 "homeobox A3" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0001974 "blood vessel
remodeling" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0010159 "specification of organ
position" evidence=ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=ISO] [GO:0030878 "thyroid gland
development" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=ISO] [GO:0048645 "organ formation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060017
"parathyroid gland development" evidence=ISO] [GO:0071837 "HMG box
domain binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1561431 GO:GO:0005634
GO:GO:0009952 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001974 GO:GO:0051216 GO:GO:0048538
GO:GO:0048645 GO:GO:0048704 GO:GO:0010159 GO:GO:0060017
GO:GO:0030878 GeneTree:ENSGT00700000104189 KO:K09303 OMA:HIQGSPV
OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293 CTD:3200
GO:GO:0021615 EMBL:CH474011 EMBL:AC122669 IPI:IPI00187912
RefSeq:XP_001058923.1 RefSeq:XP_003749795.1 RefSeq:XP_003752226.1
Ensembl:ENSRNOT00000008447 GeneID:100911474 GeneID:500125
KEGG:rno:100911474 KEGG:rno:500125 UCSC:RGD:1561431 NextBio:705172
Uniprot:D3ZM81
Length = 444
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 42/125 (33%), Positives = 59/125 (47%)
Query: 21 DEHQTP--TSLNPIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQ 76
+ + TP T+ +P+L P+ Q F + SG +GE G D S G Q
Sbjct: 133 NSNPTPASTAKSPLLNSPTVGKQIFPWMKESRQNTKQKTSGSSSGESCAG--DKSPPG-Q 189
Query: 77 AGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
A K+ R Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K
Sbjct: 190 ASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 249
Query: 135 KQLEK 139
Q K
Sbjct: 250 DQKGK 254
>RGD|1560113 [details] [associations]
symbol:Hoxb4 "homeo box B4" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0030097 "hemopoiesis"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048103
"somatic stem cell division" evidence=IEA;ISO] [GO:0048536 "spleen
development" evidence=IEA;ISO] [GO:0048539 "bone marrow
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0048705 "skeletal
system morphogenesis" evidence=ISO] [GO:0060216 "definitive
hemopoiesis" evidence=IEA;ISO] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA;ISO] [GO:2000738 "positive regulation
of stem cell differentiation" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1560113
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0000122
GO:GO:0048536 GO:GO:0048704 EMBL:CH473948 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 CTD:3214
OMA:RYAACRD GO:GO:0048539 EMBL:BC161863 IPI:IPI00199999
RefSeq:NP_001094257.1 UniGene:Rn.209614 SMR:B1WBS2 STRING:B1WBS2
Ensembl:ENSRNOT00000010965 GeneID:497988 KEGG:rno:497988
NextBio:698314 Genevestigator:B1WBS2 Uniprot:B1WBS2
Length = 250
Score = 131 (51.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGEDDFSDDGSQ 76
P + S +P P CA H S K + + + + +++ G +
Sbjct: 103 PEPGQRSEVVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA--GGE 160
Query: 77 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+ +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 161 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>MGI|MGI:96192 [details] [associations]
symbol:Hoxc10 "homeobox C10" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96192 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 GO:GO:0019907 HOGENOM:HOG000231182
HOVERGEN:HBG052934 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
eggNOG:NOG269631 OMA:CGVMRGC GO:GO:0021520 EMBL:X63507
EMBL:BC053405 EMBL:M81658 IPI:IPI00132257 PIR:A56552
RefSeq:NP_034592.2 UniGene:Mm.31665 ProteinModelPortal:P31257
SMR:P31257 STRING:P31257 PhosphoSite:P31257 PRIDE:P31257
Ensembl:ENSMUST00000001699 GeneID:209448 KEGG:mmu:209448
InParanoid:P31257 OrthoDB:EOG4F7NK9 NextBio:372673 Bgee:P31257
CleanEx:MM_HOXC10 Genevestigator:P31257
GermOnline:ENSMUSG00000022484 Uniprot:P31257
Length = 342
Score = 134 (52.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 16 QTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-G 74
QTP +E +T SL P +P + + S S +A EE E+ +
Sbjct: 207 QTPSPNEIKTEQSLAG--PKASPSESEKERAKTADSSPDTSDNEAKEEIKAENTTGNWLT 264
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++ + L RQV IWFQNRR + K
Sbjct: 265 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 324
Query: 134 TKQLE 138
E
Sbjct: 325 KMNRE 329
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 114 (45.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
Q LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 78 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 123
>UNIPROTKB|G3V397 [details] [associations]
symbol:BARX2 "Homeobox protein BarH-like 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0042637 "catagen" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0001502 GO:GO:0000976 EMBL:AP003775 HGNC:HGNC:956
GO:GO:0042637 GO:GO:0014902 ProteinModelPortal:G3V397 SMR:G3V397
Ensembl:ENST00000526127 ArrayExpress:G3V397 Bgee:G3V397
Uniprot:G3V397
Length = 134
Score = 114 (45.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAV 151
LEK F+ L ++ LA++LGL QV W+QNRR +WK L+ + +
Sbjct: 3 LEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRP 62
Query: 152 KADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAI 211
K + ++ ++++ AE + E + ++ E C + + D+ L+++ P
Sbjct: 63 K--KNSIPT-SEEIEAEEKMNSQAQGQEQLEPSQGQEELCEAQEPKARDVPLEMAEPP-- 117
Query: 212 DSP 214
D P
Sbjct: 118 DPP 120
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/107 (31%), Positives = 64/107 (59%)
Query: 54 SFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARA 113
S SG D E +GED + D ++ R +Q++ LE F+ + +++++L++
Sbjct: 111 SRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKR 170
Query: 114 LGLQPRQVAIWFQNRRARWKTKQLEKDYD-LLKRQYEAVKADREALQ 159
L L+ RQV WFQNRR + KT QLE+ + LL+++ + ++A+ +++
Sbjct: 171 LCLETRQVKFWFQNRRTQMKT-QLERHENALLRQENDKLRAENMSIR 216
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 119 (46.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 22/65 (33%), Positives = 45/65 (69%)
Query: 76 QAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
Q +K R L +Q++ LEK F+ + + +++ ++A+ +G+ P+++ +WFQNRRA+W+
Sbjct: 59 QIRKKTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRAKWR- 117
Query: 135 KQLEK 139
++EK
Sbjct: 118 -KMEK 121
>ZFIN|ZDB-GENE-980526-299 [details] [associations]
symbol:hhex "hematopoietically expressed homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0060217 "hemangioblast cell differentiation"
evidence=IMP] [GO:0045603 "positive regulation of endothelial cell
differentiation" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0030878 "thyroid gland development" evidence=IMP] [GO:0046620
"regulation of organ growth" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0001889 "liver development" evidence=IMP] [GO:0048565
"digestive tract development" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-299 GO:GO:0005634 GO:GO:0007507 GO:GO:0009952
GO:GO:0043565 GO:GO:0001889 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0045603 GO:GO:0007368 GO:GO:0009953
GO:GO:0048565 GO:GO:0035162 eggNOG:NOG252905 GO:GO:0046620
GO:GO:0030878 CTD:3087 HOVERGEN:HBG055460 KO:K08024
OrthoDB:EOG4XKV7W EMBL:AF131070 IPI:IPI00485854 RefSeq:NP_571009.1
UniGene:Dr.79053 HSSP:P22808 ProteinModelPortal:Q9IAV3 SMR:Q9IAV3
STRING:Q9IAV3 GeneID:30098 KEGG:dre:30098 NextBio:20806580
Uniprot:Q9IAV3
Length = 228
Score = 129 (50.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 123 RFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPPS 182
Query: 143 LLKRQYE 149
KR+ E
Sbjct: 183 TGKREAE 189
>ZFIN|ZDB-GENE-980526-291 [details] [associations]
symbol:hoxb8b "homeo box B8b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-291
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 HOVERGEN:HBG016849
EMBL:AL645798 GeneTree:ENSGT00700000104332 EMBL:DQ060549
EMBL:AF071255 EMBL:Y14534 IPI:IPI00480876 RefSeq:NP_571256.1
UniGene:Dr.132197 ProteinModelPortal:Q8JH55 SMR:Q8JH55
Ensembl:ENSDART00000076154 GeneID:30420 KEGG:dre:30420 CTD:30420
eggNOG:NOG314669 InParanoid:Q8JH55 OrthoDB:EOG4H464V
NextBio:20806825 ArrayExpress:Q8JH55 Bgee:Q8JH55 Uniprot:Q8JH55
Length = 247
Score = 130 (50.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K
Sbjct: 144 GRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 202
Query: 136 QLEKD-YDLLKRQYEAVKADRE 156
+ KD + K + E ++ +R+
Sbjct: 203 EHNKDKFPSSKAEQEEIERERQ 224
>UNIPROTKB|P31270 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009954 "proximal/distal pattern formation" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0060272 "embryonic skeletal joint morphogenesis" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001658 "branching involved
in ureteric bud morphogenesis" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010720
"positive regulation of cell development" evidence=ISS] [GO:0030326
"embryonic limb morphogenesis" evidence=ISS] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISS]
[GO:0048589 "developmental growth" evidence=ISS] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0007501
GO:GO:0030326 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 EMBL:AC004080 CTD:3207
eggNOG:NOG274734 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
OMA:GGCRETA GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
EMBL:AF071164 EMBL:AF039307 EMBL:BC040948 IPI:IPI00010754
PIR:S14931 RefSeq:NP_005514.1 UniGene:Hs.249171
ProteinModelPortal:P31270 SMR:P31270 IntAct:P31270 STRING:P31270
PhosphoSite:P31270 DMDM:13124744 PRIDE:P31270 DNASU:3207
Ensembl:ENST00000006015 GeneID:3207 KEGG:hsa:3207 UCSC:uc003syx.3
GeneCards:GC07M027220 HGNC:HGNC:5101 HPA:HPA035623 MIM:142958
MIM:605432 neXtProt:NX_P31270 Orphanet:71289 PharmGKB:PA29378
InParanoid:P31270 OrthoDB:EOG4KKZ3X PhylomeDB:P31270 ChiTaRS:HOXA11
GenomeRNAi:3207 NextBio:12762 Bgee:P31270 CleanEx:HS_HOXA11
Genevestigator:P31270 GermOnline:ENSG00000005073 Uniprot:P31270
Length = 313
Score = 124 (48.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 223 ESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 282
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 283 RQVKIWFQNRRM--KEKKINRD 302
Score = 46 (21.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 4 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 46
>UNIPROTKB|E1BNP2 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0048589 "developmental growth"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0030326 "embryonic limb
morphogenesis" evidence=ISS] [GO:0010720 "positive regulation of
cell development" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=ISS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0032993 "protein-DNA complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007501 "mesodermal cell fate specification"
evidence=ISS] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0030326 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:DAAA02010937 IPI:IPI00715888
Ensembl:ENSBTAT00000019611 Uniprot:E1BNP2
Length = 315
Score = 124 (48.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 225 ESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 284
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 285 RQVKIWFQNRRM--KEKKINRD 304
Score = 46 (21.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 4 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 46
>UNIPROTKB|O43365 [details] [associations]
symbol:HOXA3 "Homeobox protein Hox-A3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010159 "specification of organ position"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0048645 "organ
formation" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0060017 "parathyroid gland development"
evidence=IEA] [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0008284 EMBL:CH471073 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0001525 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001974
GO:GO:0051216 GO:GO:0048538 GO:GO:0048645 GO:GO:0048704
GO:GO:0010159 GO:GO:0060017 GO:GO:0030878 eggNOG:NOG284589
EMBL:AC004079 HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
OMA:HIQGSPV OrthoDB:EOG4K6G4J InterPro:IPR025281 Pfam:PF13293
CTD:3200 GO:GO:0021615 EMBL:BC015180 IPI:IPI00012050
RefSeq:NP_109377.1 RefSeq:NP_705895.1 UniGene:Hs.659337
ProteinModelPortal:O43365 SMR:O43365 STRING:O43365
PhosphoSite:O43365 PaxDb:O43365 PRIDE:O43365 DNASU:3200
Ensembl:ENST00000317201 Ensembl:ENST00000396352 GeneID:3200
KEGG:hsa:3200 UCSC:uc003syk.3 GeneCards:GC07M027113 HGNC:HGNC:5104
HPA:HPA029157 MIM:142954 neXtProt:NX_O43365 PharmGKB:PA29381
InParanoid:O43365 PhylomeDB:O43365 GenomeRNAi:3200 NextBio:12728
ArrayExpress:O43365 Bgee:O43365 CleanEx:HS_HOXA3
Genevestigator:O43365 GermOnline:ENSG00000105997 Uniprot:O43365
Length = 443
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/131 (32%), Positives = 59/131 (45%)
Query: 17 TPHEDEHQTPTSLN----PIL--PSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDF 70
+P ++ PT N P+L P+ A Q F + S +GE G D
Sbjct: 126 SPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMKESRQNTKQKTSSSSSGESCAG--DK 183
Query: 71 SDDGSQAGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
S G QA K+ R Q+ LEK F L R++++A L L RQ+ IWFQNR
Sbjct: 184 SPPG-QASSKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNR 242
Query: 129 RARWKTKQLEK 139
R ++K Q K
Sbjct: 243 RMKYKKDQKGK 253
>UNIPROTKB|F1SHT7 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042733 "embryonic
digit morphogenesis" evidence=IEA] [GO:0032993 "protein-DNA
complex" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0010720 "positive
regulation of cell development" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0007501 "mesodermal cell fate specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0045893 GO:GO:0005730
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0007501 GO:GO:0032332 GO:GO:0048589 GO:GO:0009953
GO:GO:0009954 GO:GO:0042733 GO:GO:0001658 GO:GO:0001656
GO:GO:0032993 GO:GO:0001759 GO:GO:0060351 OMA:GGCRETA GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
EMBL:CU570959 EMBL:CU480612 Ensembl:ENSSSCT00000018179
Uniprot:F1SHT7
Length = 316
Score = 124 (48.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 226 ESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 285
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 286 RQVKIWFQNRRM--KEKKINRD 305
Score = 46 (21.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 4 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 46
>UNIPROTKB|F1RWG5 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011 KO:K09304
OMA:RYAACRD GO:GO:0048539 EMBL:CU856160 RefSeq:XP_003131596.1
Ensembl:ENSSSCT00000019089 GeneID:100522341 KEGG:ssc:100522341
Uniprot:F1RWG5
Length = 251
Score = 130 (50.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 10 PTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGED 68
P+ +L P + S +P P CA H S K + + + +
Sbjct: 98 PSGALL--PEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNP 155
Query: 69 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
+++ G + + +QV LEK F L R++++A AL L RQ+ IWFQNR
Sbjct: 156 NYA--GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNR 213
Query: 129 RARWK 133
R +WK
Sbjct: 214 RMKWK 218
>UNIPROTKB|F8VVX3 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL445423 HGNC:HGNC:4978 IPI:IPI00643042
ProteinModelPortal:F8VVX3 SMR:F8VVX3 Ensembl:ENST00000549319
OMA:ESTQAPL ArrayExpress:F8VVX3 Bgee:F8VVX3 Uniprot:F8VVX3
Length = 274
Score = 131 (51.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 42/133 (31%), Positives = 63/133 (47%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 73 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD- 130
Query: 144 LKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKL 203
K E A + E +S ES + + E+ + +E + +
Sbjct: 131 -KEAGEKPSGGAPAADGEQD----ERSPSRSEGEAESESSDSESLDMAPSDTERTEGSER 185
Query: 204 DISRTPAIDSPMS 216
+ +T I +P++
Sbjct: 186 SLHQTTVIKAPVT 198
>UNIPROTKB|F1NNC8 [details] [associations]
symbol:TLX1 "T-cell leukemia homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048645 "organ formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0045165
GeneTree:ENSGT00700000104454 IPI:IPI00573767 EMBL:AADN02030793
Ensembl:ENSGALT00000012707 OMA:XLISELE ArrayExpress:F1NNC8
Uniprot:F1NNC8
Length = 141
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 79 EKKRRLNME--QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 136
+KK R + Q+ LEK F L + LA+AL + QV WFQNRR +W+ +Q
Sbjct: 12 KKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR-RQ 70
Query: 137 LEKDYDLLKRQYEAV--KADREALQAQ-NQKLHAEIMALKSREVTESINLNKETEGS 190
++ + ++Q + + +EA Q NQ + A+ + + + + NL ++ S
Sbjct: 71 TAEEREAERQQANRILMQLQQEAFQKTINQPIQADPICVHNSSLFALQNLQPWSDDS 127
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++++ L RQV IWFQNRR + K
Sbjct: 18 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK 77
Query: 134 TKQLE 138
E
Sbjct: 78 KMNRE 82
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++++ L RQV IWFQNRR + K
Sbjct: 22 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLK 81
Query: 134 TKQLE 138
E
Sbjct: 82 KMNRE 86
>UNIPROTKB|F1SHT6 [details] [associations]
symbol:F1SHT6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:CU480612
ProteinModelPortal:F1SHT6 SMR:F1SHT6 Ensembl:ENSSSCT00000018180
OMA:RRYEISQ Uniprot:F1SHT6
Length = 93
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER+++++R++ L RQV IWFQNRR + K
Sbjct: 16 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 75
Query: 134 TKQLE 138
E
Sbjct: 76 KMNRE 80
>UNIPROTKB|G3ECA1 [details] [associations]
symbol:HoxA10 "Homebox A10" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09295
GeneTree:ENSGT00700000104054 EMBL:CU570959 EMBL:HQ700342
RefSeq:NP_001231267.1 UniGene:Ssc.100927 UniGene:Ssc.26254
SMR:G3ECA1 Ensembl:ENSSSCT00000028043 GeneID:100620451
KEGG:ssc:100620451 OMA:GNTKGEN Uniprot:G3ECA1
Length = 94
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER+++++R++ L RQV IWFQNRR + K
Sbjct: 17 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK 76
Query: 134 TKQLE 138
E
Sbjct: 77 KMNRE 81
>RGD|1587253 [details] [associations]
symbol:Hoxa7 "homeobox A7" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001525 "angiogenesis"
evidence=ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISO] [GO:0002686 "negative regulation of
leukocyte migration" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045656 "negative
regulation of monocyte differentiation" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q LEK F L R +++A AL L RQ+ IWFQNRR +WK + ++
Sbjct: 16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 67
>UNIPROTKB|P09634 [details] [associations]
symbol:Hoxa7 "Homeobox protein Hox-A7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1587253
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0002686 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0001953
GO:GO:0048704 eggNOG:NOG238660 HOVERGEN:HBG006088 OrthoDB:EOG4W9J4Z
GO:GO:0045617 GO:GO:0045656 EMBL:M16807 IPI:IPI01016307 PIR:A27471
UniGene:Rn.203714 ProteinModelPortal:P09634 SMR:P09634
UCSC:RGD:1587253 InParanoid:P09634 ArrayExpress:P09634
Genevestigator:P09634 GermOnline:ENSRNOG00000006544 Uniprot:P09634
Length = 105
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q LEK F L R +++A AL L RQ+ IWFQNRR +WK + ++
Sbjct: 16 QTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWKKEHKDE 67
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 130 (50.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 27 TSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEA-NGEDDFSDDGSQAGEKKRR-L 84
+SL + + P D +GV + S E + N E+ +GS K+R
Sbjct: 119 SSLGLVDTTGGPGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAF 178
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 179 TKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>ZFIN|ZDB-GENE-030131-5304 [details] [associations]
symbol:hlx1 "H2.0-like homeo box 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-5304 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 eggNOG:NOG331357
HOGENOM:HOG000112911 HOVERGEN:HBG000457 OrthoDB:EOG473PRM
EMBL:CU633978 IPI:IPI00510547 Ensembl:ENSDART00000131806
OMA:CIADILQ Uniprot:B8JMG3
Length = 356
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARWK-TKQLEKDYDLLK 145
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W+ +K+ + D K
Sbjct: 219 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEK 277
Query: 146 RQYEAVKADREALQAQNQKLHAE 168
Q + A+ E + + + E
Sbjct: 278 EQPDKSAAETEQKERDDSECETE 300
>UNIPROTKB|E2R114 [details] [associations]
symbol:HOXA11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
CTD:3207 KO:K09296 OMA:GGCRETA InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 EMBL:AAEX03009390
RefSeq:XP_003431971.2 Ensembl:ENSCAFT00000004754 GeneID:100683897
KEGG:cfa:100683897 Uniprot:E2R114
Length = 327
Score = 124 (48.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 237 ESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 296
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 297 RQVKIWFQNRRM--KEKKINRD 316
Score = 46 (21.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 22 EHQTPTSLNPILPSC----APQDFHGVASFL----GKRSMSFS 56
+ + P S N LPSC + DF + SFL R M++S
Sbjct: 5 DERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYS 47
>RGD|2321880 [details] [associations]
symbol:LOC100360577 "homeobox A4-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:2321880 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AC122669 IPI:IPI00778476
Ensembl:ENSRNOT00000058985 ArrayExpress:E9PTN3 Uniprot:E9PTN3
Length = 189
Score = 124 (48.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 78 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 137
Query: 131 RWK 133
+WK
Sbjct: 138 KWK 140
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 130 (50.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + +Q LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 144 RFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQS 203
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEI---MALKSREVTESINLNKETEGSCSNRSENSS 199
K +++ E Q Q L +E +L + + S ++ + S S+
Sbjct: 204 NKKDALDSLDTSCE----QGQDLPSEQNKGASLDRSQCSPSPASQEDPDSEISEDSDQEV 259
Query: 200 DIKLD 204
DI+ D
Sbjct: 260 DIEGD 264
>UNIPROTKB|E1B9U3 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 EMBL:DAAA02004174 IPI:IPI01001832 RefSeq:NP_001193253.1
UniGene:Bt.87148 Ensembl:ENSBTAT00000054133 GeneID:613983
KEGG:bta:613983 NextBio:20898873 Uniprot:E1B9U3
Length = 337
Score = 124 (48.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 250 EAGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 309
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 310 KIWFQNRRM--KEKKLNRD 326
Score = 46 (21.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 26 PTSLNPILPSCA----PQDFHGVASFLGKRS 52
P++ + LP CA P DF SFL + S
Sbjct: 9 PSAASMYLPGCAYYVAPSDFASKPSFLSQPS 39
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 112 (44.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++++ L RQV IWFQNRR + K
Sbjct: 18 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLK 77
Query: 134 TKQLE 138
E
Sbjct: 78 KMSRE 82
>UNIPROTKB|Q08DG5 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 eggNOG:NOG305812
EMBL:BC123761 IPI:IPI00713167 RefSeq:NP_001071582.1
UniGene:Bt.46279 ProteinModelPortal:Q08DG5 SMR:Q08DG5 PRIDE:Q08DG5
GeneID:768240 KEGG:bta:768240 CTD:3214 InParanoid:Q08DG5
NextBio:20918537 Uniprot:Q08DG5
Length = 251
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 10 PTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGED 68
P+ +L P + S +P P CA H S K + + + +
Sbjct: 98 PSGALL--PEPGQRCEAISSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNP 155
Query: 69 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
+++ G + + +QV LEK F L R++++A AL L RQ+ IWFQNR
Sbjct: 156 NYA--GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNR 213
Query: 129 RARWK 133
R +WK
Sbjct: 214 RMKWK 218
>UNIPROTKB|F6UWC1 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
OMA:RYAACRD EMBL:AAEX03006516 Ensembl:ENSCAFT00000026671
EMBL:AAEX03006515 Uniprot:F6UWC1
Length = 251
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGEDDFSDDGSQ 76
P + S +P P CA H S K + + + + +++ G +
Sbjct: 104 PEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA--GGE 161
Query: 77 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+ +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|P17483 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002011 "morphogenesis of
an epithelial sheet" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048103 "somatic stem cell
division" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048539 "bone marrow development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:2000738 "positive regulation of stem cell
differentiation" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060218 "hematopoietic stem cell differentiation" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008283 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0060218 GO:GO:0048536 GO:GO:0048704 GO:GO:0048103
GO:GO:0060216 GO:GO:0002011 eggNOG:NOG314883 KO:K09304
GO:GO:2000738 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:AF287967 CTD:3214 EMBL:X16174 EMBL:AF307160
EMBL:BC049204 EMBL:AL137449 IPI:IPI00014540 PIR:B60492 PIR:T46446
RefSeq:NP_076920.1 UniGene:Hs.664706 ProteinModelPortal:P17483
SMR:P17483 STRING:P17483 PhosphoSite:P17483 DMDM:547692
PaxDb:P17483 PeptideAtlas:P17483 PRIDE:P17483
Ensembl:ENST00000332503 GeneID:3214 KEGG:hsa:3214 UCSC:uc002inp.3
GeneCards:GC17M046652 HGNC:HGNC:5115 MIM:142965 neXtProt:NX_P17483
PharmGKB:PA29391 InParanoid:P17483 OMA:RYAACRD GenomeRNAi:3214
NextBio:12788 Bgee:P17483 CleanEx:HS_HOXB4 Genevestigator:P17483
GermOnline:ENSG00000182742 GO:GO:0048539 Uniprot:P17483
Length = 251
Score = 129 (50.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGEDDFSDDGSQ 76
P + S +P P CA H S K + + + + +++ G +
Sbjct: 104 PEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA--GGE 161
Query: 77 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+ +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 162 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 130 (50.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + EQ LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209
Query: 143 LLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIK 202
K + E D +++ A + ++ + S ++ E S+ S+ DI+
Sbjct: 210 TKKEEAEGT-GDHGDPRSEGSPSPAGGGEAEPQD-SPSAASQEDPESDVSDDSDQEVDIE 267
Query: 203 LD 204
D
Sbjct: 268 GD 269
>UNIPROTKB|F1P8H3 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705
"skeletal system morphogenesis" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 CTD:3234
OMA:GQEYFHP EMBL:AAEX03017789 RefSeq:XP_003434266.1
ProteinModelPortal:F1P8H3 Ensembl:ENSCAFT00000021331
GeneID:100687992 KEGG:cfa:100687992 Uniprot:F1P8H3
Length = 199
Score = 125 (49.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K
Sbjct: 105 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 163
Query: 136 QLEKDYDLLKRQYEAVKAD--REALQAQNQK 164
+ KD + RQ EA + +EA + + +
Sbjct: 164 ENNKDKFPVSRQ-EAKDGETKKEAQELEEDR 193
>UNIPROTKB|A8MTQ0 [details] [associations]
symbol:NOTO "Homeobox protein notochord" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0030903 "notochord development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0009880 GO:GO:0030903 EMBL:AC010913 EMBL:AK295936
EMBL:AK316410 IPI:IPI00247814 RefSeq:NP_001127934.1
UniGene:Hs.694384 ProteinModelPortal:A8MTQ0 SMR:A8MTQ0
STRING:A8MTQ0 PRIDE:A8MTQ0 Ensembl:ENST00000398468 GeneID:344022
KEGG:hsa:344022 UCSC:uc010yrd.2 CTD:344022 GeneCards:GC02P073429
HGNC:HGNC:31839 HPA:HPA034660 neXtProt:NX_A8MTQ0
PharmGKB:PA134895171 eggNOG:NOG311470 HOGENOM:HOG000082431
HOVERGEN:HBG108196 InParanoid:A8MTQ0 OMA:QQKRVRT OrthoDB:EOG48GW4Q
GenomeRNAi:344022 NextBio:98630 Bgee:A8MTQ0 CleanEx:HS_NOTO
Genevestigator:A8MTQ0 Uniprot:A8MTQ0
Length = 251
Score = 124 (48.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 32 ILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKT 91
+ P C F GV G SG+ A + +D D Q + N+EQ++
Sbjct: 115 VAPVCGLLGF-GVT---GLELAHCSGLWAFPDWAPTEDLQDTERQQKRVRTMFNLEQLEE 170
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 136
LEK F + L +++ QLA L L QV +WFQNRR +++ +Q
Sbjct: 171 LEKVFAKQHNLVGKKRAQLAARLKLTENQVRVWFQNRRVKYQKQQ 215
Score = 39 (18.8 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 228 KSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMQG 263
K ++V AA L SSSS +Q E + G
Sbjct: 216 KLRAAVTSAEAASLDEPSSSSIASIQSDDAESGVDG 251
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 130 (50.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +CAP D+ A + KRS D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACAPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|P13544 [details] [associations]
symbol:HOXD1 "Homeobox protein Hox-D1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314488 EMBL:M23611 IPI:IPI01017276
PIR:JU0068 ProteinModelPortal:P13544 SMR:P13544 InParanoid:P13544
Uniprot:P13544
Length = 67
Score = 111 (44.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q+ LEK F L R++++AR+L L+ QV +WFQNRR + K ++ E+
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 111 (44.1 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 54 SFSGIDAGEEANGEDDFSDDGSQAGE-------KKRRL--NMEQVKTLEKNFELGNKLEP 104
+FS +A E+ G+ D + A +K+R Q LEK F L
Sbjct: 14 AFSENNAENESGGDKPPIDPNNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTR 73
Query: 105 ERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+R+ ++AR L L RQV IWFQNRR K K++ KD
Sbjct: 74 DRRYEVARLLNLTERQVKIWFQNRRM--KMKKINKD 107
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 130 (50.8 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +CAP D+ A + KRS D+ + G S+ S+ +++
Sbjct: 136 SSTPTGAACAPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 194
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 195 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
>UNIPROTKB|Q9NYD6 [details] [associations]
symbol:HOXC10 "Homeobox protein Hox-C10" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0050905 "neuromuscular process"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0030326 GO:GO:0001501
GO:GO:0050905 GO:GO:0009954 HOGENOM:HOG000231182 HOVERGEN:HBG052934
KO:K09295 EMBL:AF255675 EMBL:BC001293 EMBL:X99684 EMBL:X99685
IPI:IPI00020947 PIR:B60941 RefSeq:NP_059105.2 UniGene:Hs.44276
ProteinModelPortal:Q9NYD6 SMR:Q9NYD6 IntAct:Q9NYD6 STRING:Q9NYD6
PhosphoSite:Q9NYD6 DMDM:20141612 PRIDE:Q9NYD6 DNASU:3226
Ensembl:ENST00000303460 GeneID:3226 KEGG:hsa:3226 UCSC:uc001sen.3
CTD:3226 GeneCards:GC12P054378 HGNC:HGNC:5122 HPA:CAB046474
MIM:605560 neXtProt:NX_Q9NYD6 PharmGKB:PA29397 eggNOG:NOG269631
InParanoid:Q9NYD6 OMA:CGVMRGC PhylomeDB:Q9NYD6 GenomeRNAi:3226
NextBio:12839 ArrayExpress:Q9NYD6 Bgee:Q9NYD6 CleanEx:HS_HOXC10
Genevestigator:Q9NYD6 GermOnline:ENSG00000180818 GO:GO:0021520
Uniprot:Q9NYD6
Length = 342
Score = 131 (51.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 16 QTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-G 74
QTP +E +T SL P +P + + S S +A EE E+ +
Sbjct: 207 QTPSPNEIKTEQSLAG--PKGSPSESEKERAKAADSSPDTSDNEAKEEIKAENTTGNWLT 264
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++ + L RQV IWFQNRR + K
Sbjct: 265 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 324
Query: 134 TKQLE 138
E
Sbjct: 325 KMNRE 329
>UNIPROTKB|E2QT52 [details] [associations]
symbol:HOXB4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 Ensembl:ENSCAFT00000026671 Uniprot:E2QT52
Length = 274
Score = 129 (50.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 33/117 (28%), Positives = 51/117 (43%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDFHGVASFLG-KRSMSFSGIDAGEEANGEDDFSDDGSQ 76
P + S +P P CA H S K + + + + +++ G +
Sbjct: 111 PEPGQRCEAVSSSPPPPPCAQNPLHPSPSHSACKEPVVYPWMRKVHVSTVNPNYA--GGE 168
Query: 77 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+ +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 169 PKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 225
>UNIPROTKB|E2RMK2 [details] [associations]
symbol:HOXD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0001759 "organ induction"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001656 "metanephros development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589
GO:GO:0009953 GO:GO:0009954 GO:GO:0042733 GO:GO:0001658
GO:GO:0001656 GO:GO:0001759 GO:GO:0060351 KO:K09296 GO:GO:0010720
InterPro:IPR021918 Pfam:PF12045 GeneTree:ENSGT00700000104263
CTD:3237 OMA:SPCTKAT EMBL:AAEX03017786 RefSeq:XP_852429.1
Ensembl:ENSCAFT00000021317 GeneID:609973 KEGG:cfa:609973
NextBio:20895547 Uniprot:E2RMK2
Length = 340
Score = 123 (48.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 253 EAGAEKSGGAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 312
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 313 KIWFQNRRM--KEKKLNRD 329
Score = 46 (21.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 26 PTSLNPILPSCA----PQDFHGVASFLGKRS 52
P++ + LP CA P DF SFL + S
Sbjct: 9 PSAASMYLPGCAYYVAPSDFASKPSFLSQPS 39
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 129 (50.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + EQ LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 150 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 209
Query: 143 LLKRQYE 149
K + E
Sbjct: 210 TKKEEAE 216
>UNIPROTKB|P17278 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG314883 HOGENOM:HOG000231179
HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7 EMBL:X52671 EMBL:X52672
IPI:IPI00600943 PIR:S09256 UniGene:Gga.54375
ProteinModelPortal:P17278 SMR:P17278 STRING:P17278
InParanoid:P17278 Uniprot:P17278
Length = 235
Score = 127 (49.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 18 PHEDEHQTPTSLNPILPSCAPQDF----HGVASFLGKRSMSFSGIDAGEEANGEDDFSDD 73
P + EH P PI PSC Q HG A + + ++ + + + ++S
Sbjct: 87 PGQAEHCPPPPC-PI-PSCGQQPALKAPHGSA--VKQPAVVYPWMKKVHVNSVNPNYS-- 140
Query: 74 GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
G + + +QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 141 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>UNIPROTKB|P31277 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001656 "metanephros development" evidence=IEA] [GO:0001759
"organ induction" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0010720 "positive regulation
of cell development" evidence=IEA] [GO:0032332 "positive regulation
of chondrocyte differentiation" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0032332
GO:GO:0048589 GO:GO:0009953 GO:GO:0009954 GO:GO:0042733
GO:GO:0001658 GO:GO:0001656 GO:GO:0001759 GO:GO:0060351
EMBL:AC009336 HOGENOM:HOG000231898 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 EMBL:AF154915 IPI:IPI00305856 PIR:S14938
RefSeq:NP_067015.2 UniGene:Hs.421136 ProteinModelPortal:P31277
SMR:P31277 STRING:P31277 DMDM:223590220 PRIDE:P31277 DNASU:3237
Ensembl:ENST00000249504 GeneID:3237 KEGG:hsa:3237 UCSC:uc002uki.3
GeneCards:GC02P176936 HGNC:HGNC:5134 MIM:142986 neXtProt:NX_P31277
PharmGKB:PA29408 eggNOG:NOG305087 OMA:SPCTKAT GenomeRNAi:3237
NextBio:12883 ArrayExpress:P31277 Bgee:P31277 CleanEx:HS_HOXD11
Genevestigator:P31277 GermOnline:ENSG00000128713 Uniprot:P31277
Length = 338
Score = 128 (50.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E S Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 251 EAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 310
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 311 KIWFQNRRM--KEKKLNRD 327
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 33 LPSCA----PQDFHGVASFLGKRS 52
LP CA P DF SFL + S
Sbjct: 16 LPGCAYYVAPSDFASKPSFLSQPS 39
>UNIPROTKB|F1NZK4 [details] [associations]
symbol:F1NZK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02078917 EMBL:AADN02078918
IPI:IPI00814051 Ensembl:ENSGALT00000038675 OMA:AKTIPSC
Uniprot:F1NZK4
Length = 179
Score = 121 (47.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 41/118 (34%), Positives = 56/118 (47%)
Query: 31 PILPSCAPQDF-HGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRR--LNME 87
P L S +PQDF LG S S+ G+ + D D + A +KK R +
Sbjct: 28 PFL-SASPQDFKEDKEKPLGPPSPSY-----GDR---QRDGGDRQAGAAKKKTRTVFSRS 78
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLK 145
QV LE F++ L + LA +L L QV WFQNRR +WK +QL + + K
Sbjct: 79 QVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWK-RQLSAELEAAK 135
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 129 (50.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYD 142
R + EQ LEK FE L P + +LA+ L L RQV WFQNRRA+W+ + E
Sbjct: 159 RFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQENPQA 218
Query: 143 LLKRQYE 149
K + E
Sbjct: 219 TKKEEAE 225
>MGI|MGI:96195 [details] [associations]
symbol:Hoxc4 "homeobox C4" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
MGI:MGI:96195 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA CTD:3221 EMBL:D11328 EMBL:S62287 EMBL:X69019
EMBL:M81660 IPI:IPI00122942 PIR:S35219 RefSeq:NP_038581.2
UniGene:Mm.1351 ProteinModelPortal:Q08624 SMR:Q08624 STRING:Q08624
PhosphoSite:Q08624 PRIDE:Q08624 Ensembl:ENSMUST00000100164
GeneID:15423 KEGG:mmu:15423 UCSC:uc007xxg.1 InParanoid:Q08624
NextBio:288166 Bgee:Q08624 CleanEx:MM_HOXC4 Genevestigator:Q08624
GermOnline:ENSMUSG00000075394 Uniprot:Q08624
Length = 264
Score = 128 (50.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 25 TPTSLNPILPSCA-PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRR 83
T S +P P+C+ P H +S K+ + + + + +++ G + +
Sbjct: 106 TSASPSPAPPACSQPAPDHP-SSAASKQPIVYPWMKKIHVSTVNPNYN--GGEPKRSRTA 162
Query: 84 LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 163 YTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|F1NDR5 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 IPI:IPI00596089
GeneTree:ENSGT00700000104333 EMBL:AADN02014984
Ensembl:ENSGALT00000025153 Uniprot:F1NDR5
Length = 298
Score = 129 (50.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 56 SGIDAGEEANGEDDFSDDGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLAR 112
SG EE GE+ + AG KK+ + QV LE F++ L + LA
Sbjct: 142 SGGREEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAA 201
Query: 113 ALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADR 155
+L L QV IWFQNRR +WK +QL D + + A + R
Sbjct: 202 SLHLTETQVKIWFQNRRNKWK-RQLAADLEAANLSHAAQRIVR 243
>UNIPROTKB|F1NYF2 [details] [associations]
symbol:NKX6-2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0010454 "negative regulation of cell fate
commitment" evidence=IEA] [GO:0010455 "positive regulation of cell
fate commitment" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021913
"regulation of transcription from RNA polymerase II promoter
involved in ventral spinal cord interneuron specification"
evidence=IEA] [GO:0022010 "central nervous system myelination"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030154
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0010455 GO:GO:0010454
EMBL:AADN02047157 EMBL:AADN02047158 IPI:IPI00600245
Ensembl:ENSGALT00000018301 Uniprot:F1NYF2
Length = 133
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
G+KK + +Q+ LEK FE L + +LA +LG+ QV +WFQNRR +W+
Sbjct: 21 GKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 80
Query: 135 K 135
+
Sbjct: 81 R 81
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRAR 131
LEK F + RK +LA ALGL RQV IWFQNRRA+
Sbjct: 21 LEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAK 60
>UNIPROTKB|F1MZR4 [details] [associations]
symbol:LOC516179 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0045687 "positive regulation of glial cell differentiation"
evidence=IEA] [GO:0045686 "negative regulation of glial cell
differentiation" evidence=IEA] [GO:0031018 "endocrine pancreas
development" evidence=IEA] [GO:0022010 "central nervous system
myelination" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0010455
"positive regulation of cell fate commitment" evidence=IEA]
[GO:0010454 "negative regulation of cell fate commitment"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0050885 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0022010 GO:GO:0031018 GO:GO:0000976
GeneTree:ENSGT00680000099625 GO:GO:0021913 GO:GO:0045687
GO:GO:0045686 GO:GO:0010455 GO:GO:0010454 GO:GO:0021912
EMBL:DAAA02046415 IPI:IPI00838790 Ensembl:ENSBTAT00000045009
OMA:WDDEKIT Uniprot:F1MZR4
Length = 151
Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 134
G+KK + +Q LEK FE L + +LA +LG+ QV +WFQNRR +W+
Sbjct: 22 GKKKHSRPTFSGQQTFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 81
Query: 135 KQLEKDYDLLKRQ 147
+ + K+Q
Sbjct: 82 RHAAEMASAKKKQ 94
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 129 (50.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +C P D+ A + KRS S D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACPPGDYGRQALSPAEAEKRSGSKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>UNIPROTKB|F1RZG1 [details] [associations]
symbol:HOXD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048705
GeneTree:ENSGT00700000104332 OMA:GQEYFHP EMBL:CU570829
Ensembl:ENSSSCT00000017404 Uniprot:F1RZG1
Length = 221
Score = 125 (49.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K
Sbjct: 127 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 185
Query: 136 QLEKDYDLLKRQYEAVKAD--REALQAQNQK 164
+ KD + RQ EA + +EA + + +
Sbjct: 186 ENNKDKFPVSRQ-EAKDGETKKEAQELEEDR 215
>UNIPROTKB|F1NDR4 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104333 EMBL:AADN02014984 IPI:IPI00574330
Ensembl:ENSGALT00000025154 Uniprot:F1NDR4
Length = 330
Score = 129 (50.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 56 SGIDAGEEANGEDDFSDDGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLAR 112
SG EE GE+ + AG KK+ + QV LE F++ L + LA
Sbjct: 141 SGGREEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAA 200
Query: 113 ALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADR 155
+L L QV IWFQNRR +WK +QL D + + A + R
Sbjct: 201 SLHLTETQVKIWFQNRRNKWK-RQLAADLEAANLSHAAQRIVR 242
>WB|WBGene00000450 [details] [associations]
symbol:ceh-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034243 "regulation of transcription elongation from RNA
polymerase II promoter" evidence=ISS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981
GO:GO:0000976 GO:GO:0050807 GO:GO:0034243
GeneTree:ENSGT00700000104129 KO:K09352 EMBL:Z77133 EMBL:AY205144
RefSeq:NP_510169.4 UniGene:Cel.11118 ProteinModelPortal:G5EE18
SMR:G5EE18 EnsemblMetazoa:K03A11.3 GeneID:191619
KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3 OMA:NPMFASA
NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 123 (48.4 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 31 PILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQV 89
P++P + G +S+ S + + + D + Q K R L QV
Sbjct: 57 PVIPLMQRESLLGASSYYSSPSQNQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQV 116
Query: 90 KTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDL 143
LE+ F+ + + +LA+ LGL QV IWFQNRR +K K+L +D L
Sbjct: 117 NELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRR--YKCKRLAQDRTL 168
>UNIPROTKB|G5EE18 [details] [associations]
symbol:ceh-28 "NK-2 family homeodomain protein CEH-28"
species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0000976
GO:GO:0050807 GO:GO:0034243 GeneTree:ENSGT00700000104129 KO:K09352
EMBL:Z77133 EMBL:AY205144 RefSeq:NP_510169.4 UniGene:Cel.11118
ProteinModelPortal:G5EE18 SMR:G5EE18 EnsemblMetazoa:K03A11.3
GeneID:191619 KEGG:cel:CELE_K03A11.3 CTD:191619 WormBase:K03A11.3
OMA:NPMFASA NextBio:949702 Uniprot:G5EE18
Length = 201
Score = 123 (48.4 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 31 PILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQV 89
P++P + G +S+ S + + + D + Q K R L QV
Sbjct: 57 PVIPLMQRESLLGASSYYSSPSQNQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQV 116
Query: 90 KTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDL 143
LE+ F+ + + +LA+ LGL QV IWFQNRR +K K+L +D L
Sbjct: 117 NELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRR--YKCKRLAQDRTL 168
>UNIPROTKB|Q9DE09 [details] [associations]
symbol:HMX1 "Homeobox protein HMX1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AF227921 IPI:IPI00596089 RefSeq:NP_990864.1
UniGene:Gga.14432 HSSP:P13297 ProteinModelPortal:Q9DE09
GeneID:396546 KEGG:gga:396546 CTD:3166 eggNOG:NOG241326
HOGENOM:HOG000231923 HOVERGEN:HBG031610 KO:K09349 OrthoDB:EOG434W7H
NextBio:20816582 Uniprot:Q9DE09
Length = 333
Score = 129 (50.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 56 SGIDAGEEANGEDDFSDDGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLAR 112
SG EE GE+ + AG KK+ + QV LE F++ L + LA
Sbjct: 177 SGGREEEEERGEEAGEAEQRAAGRKKKTRTVFSRSQVFQLESTFDVKRYLSSSERAGLAA 236
Query: 113 ALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADR 155
+L L QV IWFQNRR +WK +QL D + + A + R
Sbjct: 237 SLHLTETQVKIWFQNRRNKWK-RQLAADLEAANLSHAAQRIVR 278
>ZFIN|ZDB-GENE-001020-1 [details] [associations]
symbol:hmx3 "homeo box (H6 family) 3" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0048916
"posterior lateral line development" evidence=IGI] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001020-1 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0048916 HSSP:P13297 HOGENOM:HOG000231923
KO:K09349 CTD:340784 eggNOG:NOG312519 HOVERGEN:HBG098273
OrthoDB:EOG4T1HN9 EMBL:AF288211 EMBL:EU050651 EMBL:BC095015
IPI:IPI00859820 RefSeq:NP_571709.1 UniGene:Dr.82517
ProteinModelPortal:Q504H8 STRING:Q504H8 GeneID:60310 KEGG:dre:60310
InParanoid:Q9DFB1 NextBio:20892417 ArrayExpress:Q504H8
Uniprot:Q504H8
Length = 297
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 61 GEEANGEDDF--SDDGSQ---AGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARA 113
G++ G DD+ SDDG+ +KK R + QV LE F++ L + LA +
Sbjct: 147 GKKEGGIDDWKKSDDGADKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAAS 206
Query: 114 LGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVK 152
L L QV IWFQNRR +WK +QL + + + A +
Sbjct: 207 LHLTETQVKIWFQNRRNKWK-RQLAAELEAANLSHAAAQ 244
>UNIPROTKB|F1P4V0 [details] [associations]
symbol:F1P4V0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104161 EMBL:AADN02020016 IPI:IPI00596552
Ensembl:ENSGALT00000015078 OMA:VKENQIS Uniprot:F1P4V0
Length = 67
Score = 109 (43.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLE 138
Q+ LEK F L R++++AR+L L+ QV +WFQNRR + K ++ E
Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERE 62
>UNIPROTKB|D2H028 [details] [associations]
symbol:PANDA_002743 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0000988 "protein binding transcription factor activity"
evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0004882 "androgen
receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0007431 "salivary gland development" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0010942 "positive regulation of cell death"
evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISS] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=ISS] [GO:0051781 "positive
regulation of cell division" evidence=ISS] [GO:0060442 "branching
involved in prostate gland morphogenesis" evidence=ISS] [GO:0060664
"epithelial cell proliferation involved in salivary gland
morphogenesis" evidence=ISS] [GO:0060770 "negative regulation of
epithelial cell proliferation involved in prostate gland
development" evidence=ISS] [GO:0071383 "cellular response to
steroid hormone stimulus" evidence=ISS] [GO:0071899 "negative
regulation of estrogen receptor binding" evidence=ISS] [GO:2000836
"positive regulation of androgen secretion" evidence=ISS]
[GO:2001022 "positive regulation of response to DNA damage
stimulus" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045931 GO:GO:0008284
GO:GO:0051781 GO:GO:0045944 GO:GO:0014068 GO:GO:0030295
GO:GO:0043621 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0006919 GO:GO:0010942 GO:GO:0033574
GO:GO:0001047 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0030331 GO:GO:0060770 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GO:GO:2001022 GO:GO:0060442 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 HOGENOM:HOG000231923 GO:GO:0071899
GO:GO:2000836 EMBL:GL192401 Uniprot:D2H028
Length = 140
Score = 109 (43.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 75 SQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
S+ +K+ R + QV LE+ F L + LA+ L L QV IWFQNRR +
Sbjct: 26 SKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKT 85
Query: 133 KTKQLEKDYDLLKRQYEAVKADREAL-QAQNQKLH 166
K KQL D L++ E L QA +H
Sbjct: 86 KRKQLTSDLGDLEKHSSLPALKEEGLSQASPISMH 120
>UNIPROTKB|F1S6F3 [details] [associations]
symbol:BARX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042637 "catagen"
evidence=IEA] [GO:0014902 "myotube differentiation" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001502
GO:GO:0000976 GeneTree:ENSGT00700000104097 GO:GO:0042637
GO:GO:0014902 EMBL:CU856388 Ensembl:ENSSSCT00000016608 OMA:TQEPKAR
Uniprot:F1S6F3
Length = 230
Score = 125 (49.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 46/194 (23%), Positives = 91/194 (46%)
Query: 26 PTSLNPILPSCAPQDFHGVASFLGKRSMSFSGI-DAGEEANGEDDFSDDGSQAGEKKRRL 84
P ++ ++P+ AP GVA L + + + +A E +G + + +KK R
Sbjct: 32 PAVISHLVPA-AP----GVAQALSRHPATEAACTEALGENHGSSESETEQPAPRQKKPRR 86
Query: 85 NME-----QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
+ Q+ LEK F+ L ++ LA++LGL QV W+QNRR +WK L+
Sbjct: 87 SRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKG 146
Query: 140 DYDLLKRQYEAVKADR----EALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRS 195
+ + K + E ++A+ +KL+++ + + +E +++ EG C +
Sbjct: 147 GQEAPTKPKGRPKKNSIPTSEEIEAE-EKLNSQAQSQEGQEPSQA------QEGLCDTQE 199
Query: 196 ENSSDIKLDISRTP 209
+ + ++ R+P
Sbjct: 200 PKARGVAVEGDRSP 213
>ZFIN|ZDB-GENE-040409-1 [details] [associations]
symbol:mnx1 "motor neuron and pancreas homeobox 1"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-040409-1 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 CTD:3110
HOGENOM:HOG000234345 HOVERGEN:HBG051910 KO:K08025 HSSP:P14653
OMA:YNSSDCS EMBL:BX247878 EMBL:BC093243 EMBL:AY445044
IPI:IPI00504002 RefSeq:NP_001009885.1 UniGene:Dr.91917 SMR:Q6SYZ1
STRING:Q6SYZ1 Ensembl:ENSDART00000052236 GeneID:405399
KEGG:dre:405399 InParanoid:Q6SYZ1 NextBio:20817724 Uniprot:Q6SYZ1
Length = 311
Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKR 146
+Q+ LE F+L L ++ ++A +L L QV IWFQNRR +WK + K+
Sbjct: 187 QQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQDA 246
Query: 147 QYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDIS 206
+ + K + + + +K + ++ + KS + + + + E EG N NSSD +
Sbjct: 247 EKQKGKGNHDKMDGL-EKDYQKVDSGKSNRIRDFRDSDDE-EGD--NYMLNSSDCSSEDE 302
Query: 207 RTPAIDSP 214
RT I SP
Sbjct: 303 RTNDI-SP 309
>RGD|1311961 [details] [associations]
symbol:Hlx "H2.0-like homeobox" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045627 "positive regulation of T-helper 1 cell
differentiation" evidence=IEA;ISO] [GO:0045629 "negative regulation
of T-helper 2 cell differentiation" evidence=IEA;ISO] [GO:0046622
"positive regulation of organ growth" evidence=IEA;ISO] [GO:0048484
"enteric nervous system development" evidence=IEA;ISO] [GO:0048513
"organ development" evidence=ISO] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1311961 GO:GO:0005634 GO:GO:0030154 GO:GO:0008284
GO:GO:0001889 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0046622
GO:GO:0000976 GO:GO:0048484 GeneTree:ENSGT00700000104097
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
OMA:AHPHASF OrthoDB:EOG473PRM EMBL:BC127513 IPI:IPI00194237
RefSeq:NP_001071142.1 UniGene:Rn.35243 ProteinModelPortal:A0JPN1
SMR:A0JPN1 Ensembl:ENSRNOT00000003155 GeneID:364069 KEGG:rno:364069
UCSC:RGD:1311961 InParanoid:A0JPN1 NextBio:684784
Genevestigator:A0JPN1 Uniprot:A0JPN1
Length = 476
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARWK-TK----QLEKDY 141
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W+ +K Q +KD
Sbjct: 284 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDK 342
Query: 142 DLLKRQYEAVKAD--REALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSS 199
+ ++ V A+ RE + AE + S + + + + TEG+ RS + +
Sbjct: 343 EAGEKPSGGVPAEGEREERSPSRSEGEAESESSDSESLDMAPSDTERTEGT--ERSLHQT 400
Query: 200 DIKLDISRTPAIDSPMSTHPTSRNLFPTKSTSSV 233
+ + S A+ + S+ S + F S+SS+
Sbjct: 401 TV-IKASAAGALITASSS--ASGSSFSFSSSSSL 431
>UNIPROTKB|Q14774 [details] [associations]
symbol:HLX "H2.0-like homeobox protein" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0001889 "liver development" evidence=IEA] [GO:0007519 "skeletal
muscle tissue development" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0045627
"positive regulation of T-helper 1 cell differentiation"
evidence=IEA] [GO:0045629 "negative regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0046622 "positive regulation of
organ growth" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=TAS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030154 Pathway_Interaction_DB:il12_2pathway EMBL:CH471100
GO:GO:0008284 GO:GO:0043565 GO:GO:0001889 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557 CTD:3142
eggNOG:NOG331357 HOGENOM:HOG000112911 HOVERGEN:HBG000457 KO:K09339
OrthoDB:EOG473PRM EMBL:M60721 EMBL:AF217621 EMBL:AK313298
EMBL:AB208812 EMBL:AL445423 EMBL:BC007294 EMBL:BC033808 EMBL:U14328
EMBL:U14325 EMBL:U14326 EMBL:U14327 EMBL:S56767 IPI:IPI00292164
PIR:A55180 RefSeq:NP_068777.1 UniGene:Hs.74870
ProteinModelPortal:Q14774 SMR:Q14774 STRING:Q14774
PhosphoSite:Q14774 DMDM:160291960 PaxDb:Q14774 PRIDE:Q14774
DNASU:3142 Ensembl:ENST00000366903 GeneID:3142 KEGG:hsa:3142
UCSC:uc001hmv.4 GeneCards:GC01P221052 H-InvDB:HIX0001609
HGNC:HGNC:4978 HPA:HPA005968 MIM:142995 neXtProt:NX_Q14774
PharmGKB:PA162391017 InParanoid:Q14774 PhylomeDB:Q14774
GenomeRNAi:3142 NextBio:12460 ArrayExpress:Q14774 Bgee:Q14774
CleanEx:HS_HLX Genevestigator:Q14774 GermOnline:ENSG00000136630
Uniprot:Q14774
Length = 488
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/133 (31%), Positives = 63/133 (47%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKD- 344
Query: 144 LKRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKL 203
K E A + E +S ES + + E+ + +E + +
Sbjct: 345 -KEAGEKPSGGAPAADGEQD----ERSPSRSEGEAESESSDSESLDMAPSDTERTEGSER 399
Query: 204 DISRTPAIDSPMS 216
+ +T I +P++
Sbjct: 400 SLHQTTVIKAPVT 412
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 73 DGSQAGEKKRRLN----MEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
+ S A K +R+ ++Q++ LE++F+ + L + +A ALGL QV IWFQNR
Sbjct: 59 NASAAKVKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNR 118
Query: 129 RARWKTKQLE 138
R +WK K+L+
Sbjct: 119 RTKWK-KELD 127
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/140 (32%), Positives = 63/140 (45%)
Query: 24 QTPTS-LNPILPSCAPQDFHGVASFLG--KRSMSFSGIDAGEEANGEDDFSDDGSQAGEK 80
Q P S P P CA ++ +F G R++ S AG +A G F G + +
Sbjct: 33 QLPESGPGPTSPLCALEELTS-KTFRGLDARALQPSEGRAGPDALGPGPF---GRKRRKS 88
Query: 81 KRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+ +QV LE+ F L P + LA LGL QV WFQNRRA+
Sbjct: 89 RTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAK--------- 139
Query: 141 YDLLKRQYEAVKADREALQA 160
LKR E ++AD +L+A
Sbjct: 140 ---LKRDVEEMRADVASLRA 156
>UNIPROTKB|F8VXG0 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
InterPro:IPR025281 Pfam:PF13293 EMBL:AC103702 HGNC:HGNC:5114
ChiTaRS:HOXB3 IPI:IPI01022378 ProteinModelPortal:F8VXG0 SMR:F8VXG0
Ensembl:ENST00000490677 ArrayExpress:F8VXG0 Bgee:F8VXG0
Uniprot:F8VXG0
Length = 297
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARALG 115
G G G D S GS A ++ R Q+ LEK F L R++++A L
Sbjct: 33 GSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLN 92
Query: 116 LQPRQVAIWFQNRRARWKTKQLEK 139
L RQ+ IWFQNRR ++K Q K
Sbjct: 93 LSERQIKIWFQNRRMKYKKDQKAK 116
>ZFIN|ZDB-GENE-000329-2 [details] [associations]
symbol:hoxb7a "homeo box B7a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-000329-2 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231181
GeneTree:ENSGT00700000104090 eggNOG:NOG238660 HOVERGEN:HBG016849
KO:K09307 OrthoDB:EOG4W9J4Z EMBL:AL645782 EMBL:DQ060542 EMBL:Y14533
IPI:IPI00506071 RefSeq:NP_001108563.1 UniGene:Dr.75790
ProteinModelPortal:Q8AWY9 SMR:Q8AWY9 STRING:Q8AWY9 PRIDE:Q8AWY9
Ensembl:ENSDART00000078453 GeneID:58044 KEGG:dre:58044 CTD:58044
InParanoid:Q8AWY9 OMA:NNENNLR NextBio:20892308 ArrayExpress:Q8AWY9
Bgee:Q8AWY9 Uniprot:Q8AWY9
Length = 227
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/143 (29%), Positives = 62/143 (43%)
Query: 1 MSCNGMAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDA 60
+S + +PT + L + H + +P LP + D S GK G
Sbjct: 71 LSSHTQGMYPTAYELGAVSLNMHSSLFD-HPNLPMVSAGDLCKAQSS-GKEEQR--GYHQ 126
Query: 61 GEEANGEDDFSDDGSQAGEKKR-RLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQ 117
E N + S ++KR R + +TLE K F L R++++A AL L
Sbjct: 127 NNE-NNLRIYPWMRSTGADRKRGRQTYSRYQTLELEKEFHFNRYLSRRRRIEIAHALCLT 185
Query: 118 PRQVAIWFQNRRARWKTKQLEKD 140
RQ+ IWFQNRR +WK + D
Sbjct: 186 ERQIKIWFQNRRMKWKKENKSTD 208
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
LEK F + RK +LA LGL RQV IWFQNRRA K +++ K
Sbjct: 37 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRA--KERKINK 82
>UNIPROTKB|F1PRX2 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0010942 "positive
regulation of cell death" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0071383 "cellular response to steroid hormone
stimulus" evidence=ISS] [GO:2000836 "positive regulation of
androgen secretion" evidence=ISS] [GO:2001022 "positive regulation
of response to DNA damage stimulus" evidence=ISS] [GO:0030521
"androgen receptor signaling pathway" evidence=ISS] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0030331 "estrogen receptor binding" evidence=ISS]
[GO:0030284 "estrogen receptor activity" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:0051781 "positive regulation of cell
division" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=ISS] [GO:0008285
"negative regulation of cell proliferation" evidence=ISS]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISS] [GO:0007431 "salivary
gland development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0060664 "epithelial cell proliferation involved in salivary
gland morphogenesis" evidence=ISS] [GO:0060442 "branching involved
in prostate gland morphogenesis" evidence=ISS] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=ISS] [GO:0043569 "negative regulation of
insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0033574 "response to testosterone stimulus"
evidence=ISS] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0030295 "protein kinase activator activity" evidence=ISS]
[GO:0001047 "core promoter binding" evidence=ISS] [GO:0000988
"protein binding transcription factor activity" evidence=ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0097162 "MADS box domain binding" evidence=IEA]
[GO:0071850 "mitotic cell cycle arrest" evidence=IEA] [GO:0071456
"cellular response to hypoxia" evidence=IEA] [GO:0071356 "cellular
response to tumor necrosis factor" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0035907 "dorsal
aorta development" evidence=IEA] [GO:0035690 "cellular response to
drug" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0007507 GO:GO:0045931
GO:GO:0008284 GO:GO:0051781 GO:GO:0045944 GO:GO:0071456
GO:GO:0014068 GO:GO:0030295 GO:GO:0043621 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0008584
GO:GO:0001756 GO:GO:0006919 GO:GO:0035690 GO:GO:0010942
GO:GO:0060037 GO:GO:0033574 GO:GO:0001047 GO:GO:0008656
GO:GO:0043491 GO:GO:0000976 GO:GO:0004882 GO:GO:0071347
GO:GO:0071356 GO:GO:0030331 GO:GO:0000983 GO:GO:0060770
GO:GO:0001656 GO:GO:2001244 GO:GO:0043569 GO:GO:0048754
GeneTree:ENSGT00700000104206 GO:GO:0045930 GO:GO:2001022
GO:GO:0060442 GO:GO:0071850 GO:GO:0000988 GO:GO:0030284
GO:GO:0060664 GO:GO:0071899 GO:GO:0035907 GO:GO:2000836
EMBL:AAEX03014362 Ensembl:ENSCAFT00000014483 OMA:YCLGGWN
Uniprot:F1PRX2
Length = 140
Score = 108 (43.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 75 SQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
S+ +K+ R + QV LE+ F L + LA+ L L QV IWFQNRR +
Sbjct: 26 SKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKT 85
Query: 133 KTKQLEKDYDLLKRQYEAVKADREAL-QAQNQKLH 166
K KQL D L++ E L QA +H
Sbjct: 86 KRKQLTSDLGDLEKHSSLPALKEEGLPQASLISMH 120
>UNIPROTKB|B7Z5N8 [details] [associations]
symbol:HOXB3 "cDNA FLJ51054, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114 ChiTaRS:HOXB3
GO:GO:0021546 EMBL:AK299226 IPI:IPI00947370 SMR:B7Z5N8
STRING:B7Z5N8 Ensembl:ENST00000460160 Ensembl:ENST00000485909
Uniprot:B7Z5N8
Length = 299
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARALG 115
G G G D S GS A ++ R Q+ LEK F L R++++A L
Sbjct: 35 GSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLN 94
Query: 116 LQPRQVAIWFQNRRARWKTKQLEK 139
L RQ+ IWFQNRR ++K Q K
Sbjct: 95 LSERQIKIWFQNRRMKYKKDQKAK 118
>UNIPROTKB|F1N257 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0048539 "bone
marrow development" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0008283 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0000122 GO:GO:0048536
GO:GO:0048704 GO:GO:0048103 GO:GO:0060216 GO:GO:0002011
IPI:IPI00713167 OMA:RYAACRD GO:GO:0048539 EMBL:DAAA02049065
Ensembl:ENSBTAT00000043402 Uniprot:F1N257
Length = 251
Score = 125 (49.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
GE KR +QV LEK F L R++++A AL L RQ+ IWFQNRR +WK
Sbjct: 160 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>UNIPROTKB|F1NF97 [details] [associations]
symbol:GBX2 "Homeobox protein GBX-2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
morphogenesis" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021930 "cerebellar granule cell precursor
proliferation" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0048483 "autonomic nervous system development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008283 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 IPI:IPI00603632
EMBL:AADN02057578 Ensembl:ENSGALT00000021775 OMA:PREEDCG
Uniprot:F1NF97
Length = 180
Score = 119 (46.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 73 DGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRR 129
+ + G+ +RR EQ+ LEK F L + Q+A AL L QV IWFQNRR
Sbjct: 72 NAAATGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRR 131
Query: 130 ARWK 133
A+WK
Sbjct: 132 AKWK 135
>UNIPROTKB|F1NLW0 [details] [associations]
symbol:LOC100858514 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
IPI:IPI00573429 OMA:EHKDEGP EMBL:AADN02000985 EMBL:AADN02000986
Ensembl:ENSGALT00000018013 Uniprot:F1NLW0
Length = 187
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 75 SQAGEKKR-RLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRAR 131
S ++KR R + +TLE K F L R++++A AL L RQ+ IWFQNRR +
Sbjct: 92 SSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 151
Query: 132 WKTKQLEK 139
WK + E+
Sbjct: 152 WKKEHKEE 159
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 61 GEEANGEDDF-SDDGSQAGEKK-RRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
G ++G + + S D Q G++ R +Q++ LE F+ + ++ QL R L L+P
Sbjct: 5 GGGSSGNEQYTSGDAKQNGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEP 64
Query: 119 RQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREAL 158
Q+ WFQN+R + KT++ LL+ + E +++D EA+
Sbjct: 65 DQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAM 104
>UNIPROTKB|E1B7N3 [details] [associations]
symbol:HOXD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048706 "embryonic
skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048706 GeneTree:ENSGT00700000104161 KO:K09301 CTD:3231
OMA:GDGAFVS EMBL:DAAA02004173 IPI:IPI00698903 RefSeq:XP_002685353.1
UniGene:Bt.104076 Ensembl:ENSBTAT00000021043 GeneID:100295780
KEGG:bta:100295780 Uniprot:E1B7N3
Length = 322
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/134 (29%), Positives = 59/134 (44%)
Query: 10 PTNFMLQTP---HEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANG 66
P + L+ P H QT + + P CA AS L +F + A
Sbjct: 156 PFSACLKEPTDGHSGAFQTASPAPGVYPKCASP-----ASGLPAAFSTFEWMKVKRNAPK 210
Query: 67 EDDFSDDGSQAGEKKRRLNM--EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIW 124
+ F++ G+ R N +Q+ LEK F L R++++A +L L QV IW
Sbjct: 211 KSKFAEYGAATPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIW 270
Query: 125 FQNRRARWKTKQLE 138
FQNRR + K ++ E
Sbjct: 271 FQNRRMKQKKRERE 284
>FB|FBgn0038852 [details] [associations]
symbol:CG7056 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048813
GeneTree:ENSGT00680000099625 RefSeq:NP_650938.2 UniGene:Dm.27358
ProteinModelPortal:Q9VDF0 SMR:Q9VDF0 DIP:DIP-18460N IntAct:Q9VDF0
MINT:MINT-281000 EnsemblMetazoa:FBtr0084037 GeneID:42495
KEGG:dme:Dmel_CG7056 UCSC:CG7056-RA FlyBase:FBgn0038852
InParanoid:Q9VDF0 OMA:QIRFTSQ OrthoDB:EOG4RBP28 PhylomeDB:Q9VDF0
GenomeRNAi:42495 NextBio:829091 ArrayExpress:Q9VDF0 Bgee:Q9VDF0
Uniprot:Q9VDF0
Length = 323
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/57 (45%), Positives = 30/57 (52%)
Query: 83 RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
R +Q K LE F L PE + LA L L RQV WFQNRRA+W+ L K
Sbjct: 200 RFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSK 256
>MGI|MGI:96203 [details] [associations]
symbol:Hoxd11 "homeobox D11" species:10090 "Mus musculus"
[GO:0001501 "skeletal system development" evidence=IGI;IMP]
[GO:0001656 "metanephros development" evidence=IGI] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IGI]
[GO:0001759 "organ induction" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IGI] [GO:0009954 "proximal/distal pattern
formation" evidence=IGI] [GO:0010720 "positive regulation of cell
development" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IGI] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IGI] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IGI] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IGI] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96203 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0032332 GO:GO:0048589 GO:GO:0009953 GO:GO:0009954
GO:GO:0042733 GO:GO:0001658 GO:GO:0001656 GO:GO:0060272
GO:GO:0001759 GO:GO:0060351 HOVERGEN:HBG052048 KO:K09296
GO:GO:0010720 InterPro:IPR021918 Pfam:PF12045 OrthoDB:EOG4KKZ3X
CTD:3237 eggNOG:NOG305087 EMBL:X60761 EMBL:X60762 EMBL:X71422
EMBL:X60395 IPI:IPI00989165 PIR:S16318 RefSeq:NP_032299.1
UniGene:Mm.207763 ProteinModelPortal:P23813 SMR:P23813
STRING:P23813 PRIDE:P23813 GeneID:15431 KEGG:mmu:15431
InParanoid:P23813 NextBio:288194 Bgee:P23813 CleanEx:MM_HOXD11
Genevestigator:P23813 GermOnline:ENSMUSG00000042499 Uniprot:P23813
Length = 323
Score = 124 (48.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/79 (39%), Positives = 41/79 (51%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 236 EAGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 295
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 296 KIWFQNRRM--KEKKLNRD 312
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 33 LPSCA----PQDFHGVASFLGKRS 52
LP CA P DF SFL + S
Sbjct: 3 LPGCAYYVAPSDFASKPSFLSQPS 26
>UNIPROTKB|P13378 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008595
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0048705 EMBL:AC009336
HOVERGEN:HBG016849 eggNOG:NOG314669 KO:K09308 CTD:3234
EMBL:AY014304 EMBL:AY014303 EMBL:AL520835 EMBL:BC038709
EMBL:BC090853 EMBL:X15507 IPI:IPI00008481 IPI:IPI00916034
IPI:IPI01018181 PIR:B32830 RefSeq:NP_001186675.1 RefSeq:NP_062458.1
UniGene:Hs.301963 ProteinModelPortal:P13378 SMR:P13378
MINT:MINT-7032137 STRING:P13378 PhosphoSite:P13378 DMDM:13124737
PRIDE:P13378 Ensembl:ENST00000313173 Ensembl:ENST00000429017
Ensembl:ENST00000450510 Ensembl:ENST00000544999 GeneID:3234
KEGG:hsa:3234 UCSC:uc002uko.3 GeneCards:GC02P176958 HGNC:HGNC:5139
MIM:142985 neXtProt:NX_P13378 PharmGKB:PA29413 InParanoid:P13378
OMA:GQEYFHP GenomeRNAi:3234 NextBio:12869 ArrayExpress:P13378
Bgee:P13378 CleanEx:HS_HOXD8 Genevestigator:P13378
GermOnline:ENSG00000175879 Uniprot:P13378
Length = 290
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/90 (32%), Positives = 52/90 (57%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ AL L RQV IWFQNRR +WK K
Sbjct: 196 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWK-K 254
Query: 136 QLEKD-YDLLKRQYEAVKADREALQAQNQK 164
+ KD + + +++ + + +EA + + +
Sbjct: 255 ENNKDKFPVSRQEVKDGETKKEAQELEEDR 284
>UNIPROTKB|Q9YH13 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HOVERGEN:HBG016849 KO:K09308 EMBL:X94179
IPI:IPI00581117 RefSeq:NP_990224.1 UniGene:Gga.413
ProteinModelPortal:Q9YH13 SMR:Q9YH13 GeneID:395711 KEGG:gga:395711
CTD:3224 NextBio:20815781 Uniprot:Q9YH13
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>UNIPROTKB|E1BI54 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048705 "skeletal
system morphogenesis" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0030182
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI
CTD:3224 EMBL:DAAA02012840 IPI:IPI00711888 RefSeq:XP_002687278.1
RefSeq:XP_002704291.1 ProteinModelPortal:E1BI54 SMR:E1BI54
Ensembl:ENSBTAT00000016117 GeneID:100295249 KEGG:bta:100295249
Uniprot:E1BI54
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>UNIPROTKB|E2QRS0 [details] [associations]
symbol:HOXC8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 EMBL:AAEX03014973 EMBL:AAEX03014974
Ensembl:ENSCAFT00000010684 Ensembl:ENSCAFT00000047496
NextBio:20892804 Uniprot:E2QRS0
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>UNIPROTKB|P31273 [details] [associations]
symbol:HOXC8 "Homeobox protein Hox-C8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0007275 "multicellular organismal development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 EMBL:CH471054 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 eggNOG:NOG314669 OrthoDB:EOG4H464V
KO:K09308 OMA:HHGTSSI CTD:3224 EMBL:AY014300 EMBL:AY014299
EMBL:AK290959 EMBL:BC053898 EMBL:X99680 EMBL:X99681 IPI:IPI00010756
PIR:S15534 RefSeq:NP_073149.1 UniGene:Hs.664500
ProteinModelPortal:P31273 SMR:P31273 DIP:DIP-52312N IntAct:P31273
MINT:MINT-2802457 STRING:P31273 PhosphoSite:P31273 DMDM:13124745
PRIDE:P31273 DNASU:3224 Ensembl:ENST00000040584 GeneID:3224
KEGG:hsa:3224 UCSC:uc001ser.3 GeneCards:GC12P054402 HGNC:HGNC:5129
HPA:HPA028911 MIM:142970 neXtProt:NX_P31273 PharmGKB:PA29404
InParanoid:P31273 PhylomeDB:P31273 ChiTaRS:HOXC8 GenomeRNAi:3224
NextBio:12831 Bgee:P31273 CleanEx:HS_HOXC8 Genevestigator:P31273
GermOnline:ENSG00000037965 Uniprot:P31273
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>MGI|MGI:96198 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96198 GO:GO:0005634
GO:GO:0030182 GO:GO:0009952 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231181 GO:GO:0000122 GO:GO:0000976
GO:GO:0048705 HOVERGEN:HBG016849 GeneTree:ENSGT00700000104332
eggNOG:NOG314669 OrthoDB:EOG4H464V KO:K09308 OMA:HHGTSSI CTD:3224
EMBL:X07439 EMBL:X07646 EMBL:M35603 EMBL:X03659 IPI:IPI00132381
PIR:B25180 PIR:B36023 PIR:S13785 RefSeq:NP_034596.1 UniGene:Mm.6167
ProteinModelPortal:P09025 SMR:P09025 IntAct:P09025 MINT:MINT-210049
STRING:P09025 PhosphoSite:P09025 PRIDE:P09025 DNASU:15426
Ensembl:ENSMUST00000001703 GeneID:15426 KEGG:mmu:15426
UCSC:uc012aaf.1 InParanoid:P09025 NextBio:288178 Bgee:P09025
CleanEx:MM_HOXC8 Genevestigator:P09025
GermOnline:ENSMUSG00000001657 Uniprot:P09025
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>RGD|2821 [details] [associations]
symbol:Hoxc8 "homeobox C8" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA] [GO:0030182
"neuron differentiation" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2821 GO:GO:0005634 GO:GO:0030182 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0000976 GO:GO:0048705
GeneTree:ENSGT00700000104332 KO:K09308 OMA:HHGTSSI CTD:3224
UniGene:Rn.91646 EMBL:AC116663 IPI:IPI00919307 RefSeq:NP_001170797.2
ProteinModelPortal:F1MAK7 SMR:F1MAK7 Ensembl:ENSRNOT00000031404
GeneID:24460 KEGG:rno:24460 NextBio:744549 Uniprot:F1MAK7
Length = 242
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G + R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 148 GRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 206
Query: 136 QLEKD 140
+ KD
Sbjct: 207 ENNKD 211
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 59 DAGEEANGEDDFSDDGSQAGEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALG 115
D ++ ED ++D S+ ++R+ +Q++ LE F+ + + ++A
Sbjct: 18 DKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTN 77
Query: 116 LQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQY 148
L +V +WF+NRRA+W+ ++ + +L K +
Sbjct: 78 LTEARVRVWFKNRRAKWRKRERNQQAELCKNGF 110
>UNIPROTKB|F6VMK5 [details] [associations]
symbol:NKX3-1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISS] [GO:0000988 "protein
binding transcription factor activity" evidence=ISS] [GO:0001047
"core promoter binding" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004882 "androgen receptor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0007431 "salivary gland
development" evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISS] [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010942 "positive regulation
of cell death" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0030284
"estrogen receptor activity" evidence=ISS] [GO:0030295 "protein
kinase activator activity" evidence=ISS] [GO:0030331 "estrogen
receptor binding" evidence=ISS] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISS] [GO:0033574 "response to
testosterone stimulus" evidence=ISS] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0043569 "negative regulation
of insulin-like growth factor receptor signaling pathway"
evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=ISS] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISS] [GO:0051781 "positive regulation of
cell division" evidence=ISS] [GO:0060442 "branching involved in
prostate gland morphogenesis" evidence=ISS] [GO:0060664 "epithelial
cell proliferation involved in salivary gland morphogenesis"
evidence=ISS] [GO:0060770 "negative regulation of epithelial cell
proliferation involved in prostate gland development" evidence=ISS]
[GO:0071383 "cellular response to steroid hormone stimulus"
evidence=ISS] [GO:0071899 "negative regulation of estrogen receptor
binding" evidence=ISS] [GO:2000836 "positive regulation of androgen
secretion" evidence=ISS] [GO:2001022 "positive regulation of
response to DNA damage stimulus" evidence=ISS] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0007507
GO:GO:0045931 GO:GO:0008284 GO:GO:0051781 GO:GO:0045944
GO:GO:0071456 GO:GO:0014068 GO:GO:0030295 GO:GO:0043621
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008584 GO:GO:0001756 GO:GO:0006919 GO:GO:0035690
GO:GO:0010942 GO:GO:0060037 GO:GO:0033574 GO:GO:0001047
GO:GO:0008656 GO:GO:0043491 GO:GO:0000976 GO:GO:0004882
GO:GO:0071347 GO:GO:0071356 GO:GO:0030331 GO:GO:0000983
GO:GO:0060770 GO:GO:0001656 GO:GO:2001244 GO:GO:0043569
GO:GO:0048754 GeneTree:ENSGT00700000104206 GO:GO:0045930
GO:GO:2001022 GO:GO:0060442 GO:GO:0071850 GO:GO:0000988
GO:GO:0030284 GO:GO:0060664 GO:GO:0071899 GO:GO:0035907
GO:GO:2000836 OMA:YCLGGWN Ensembl:ENSECAT00000001320 Uniprot:F6VMK5
Length = 142
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 62 EEANGEDDFSDDGSQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPR 119
E +G S+ +K+ R + QV LE+ F L + LA+ L L
Sbjct: 15 ENTSGASRGLPQPSKQPQKRSRAAFSHTQVIELERKFSRQKYLSAPERAHLAKNLKLTET 74
Query: 120 QVAIWFQNRRARWKTKQLEKDYDLLKR 146
QV IWFQNRR + K KQL D L++
Sbjct: 75 QVKIWFQNRRYKTKRKQLSSDLGNLEK 101
>RGD|1588601 [details] [associations]
symbol:Hoxd3 "homeo box D3" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010628 "positive regulation of gene expression"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYE 149
LEK F + RK +LA LGL RQV IWFQNRRA+ + +K ++Q +
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQQQ 77
>UNIPROTKB|P18867 [details] [associations]
symbol:Hoxd3 "Homeobox protein Hox-D3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:1588601
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG284589 EMBL:M37569 IPI:IPI00195537
PIR:E43559 UniGene:Rn.223085 ProteinModelPortal:P18867 SMR:P18867
STRING:P18867 UCSC:RGD:1588601 HOVERGEN:HBG052632
Genevestigator:P18867 Uniprot:P18867
Length = 114
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 88 QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 22 QLVELEKEFHFNRYLCRRRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAK 73
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYE 149
LEK F + RK +LA LGL RQV IWFQNRRA+ + +K ++Q +
Sbjct: 20 LEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQQQQQQQ 77
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 59/251 (23%), Positives = 110/251 (43%)
Query: 32 ILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKT 91
++P P V + + S + G++ ++ + G RRL T
Sbjct: 151 VVPQ-TPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENG-LPRRLRTAYTNT 208
Query: 92 ----LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQ 147
LEK F L R++++A +L L RQV +WFQNRR + K + L K D +
Sbjct: 209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD--EDN 266
Query: 148 YEAVKADREALQAQ-NQKLHAEIMALKSREVTESINLNK---ETEGSCSNRSENSSDIKL 203
+++K D + + N K + L S ++ +S + ++ S +N + ++ ++
Sbjct: 267 KDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTP 326
Query: 204 DISRTPAIDSPM--STHPTSRNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNM 261
+ S I S + ST ++ N+ + SSV +V+ L + S P ++ +K +
Sbjct: 327 NSSLETGISSNLMGSTTVSASNVI--SADSSVASSVS--LDEDIEESSP-IKVKKKDDGQ 381
Query: 262 QGTKDQESLSS 272
K+ S SS
Sbjct: 382 VIKKEAVSTSS 392
>RGD|1308443 [details] [associations]
symbol:Nkx2-2 "NK2 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0001159 "core promoter proximal region DNA binding"
evidence=ISO] [GO:0003323 "type B pancreatic cell development"
evidence=ISO] [GO:0003326 "pancreatic A cell fate commitment"
evidence=ISO] [GO:0003327 "type B pancreatic cell fate commitment"
evidence=ISO] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=ISO] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=ISO]
[GO:0021554 "optic nerve development" evidence=IEP] [GO:0030154
"cell differentiation" evidence=ISO] [GO:0031018 "endocrine
pancreas development" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048468 "cell
development" evidence=ISO] [GO:0048565 "digestive tract
development" evidence=ISO] [GO:0048665 "neuron fate specification"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308443 GO:GO:0005634 GO:GO:0009749 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032570 GO:GO:0021554 OrthoDB:EOG4Z36FJ
IPI:IPI00952221 Ensembl:ENSRNOT00000066457 UCSC:RGD:1308443
ArrayExpress:D3ZR25 Uniprot:D3ZR25
Length = 248
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/137 (29%), Positives = 62/137 (45%)
Query: 15 LQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGID--AGEEANGEDDFSD 72
L++P D P + HG+A+ + S + A E + + +
Sbjct: 61 LKSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQDSSSKSPEPSADESPDNDKETQG 120
Query: 73 DGSQAGEK-KRRLNMEQVKT--LEKNFELGNKLE-PERKMQLARALGLQPRQVAIWFQNR 128
G AG+K KRR+ + +T LE+ F L PER+ LA + L P QV IWFQN
Sbjct: 121 GGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPERE-HLASLIRLTPTQVKIWFQNH 179
Query: 129 RARWKTKQLEKDYDLLK 145
R + K + EK + L+
Sbjct: 180 RYKMKRARAEKGMEDLR 196
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 31 PILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGED-DFSDDGSQAGEKKRR-LNMEQ 88
P +CAP D+ G + + SG + ++ ++ ++ + + K+R EQ
Sbjct: 138 PTGAACAPGDY-GRQALSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQ 196
Query: 89 VKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 197 IRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 241
>UNIPROTKB|F1N3Z2 [details] [associations]
symbol:F1N3Z2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
OMA:RQESPHS GeneTree:ENSGT00660000095141 EMBL:DAAA02012018
IPI:IPI00713510 Ensembl:ENSBTAT00000014768 Uniprot:F1N3Z2
Length = 343
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/92 (34%), Positives = 43/92 (46%)
Query: 43 GVASFLGKRSMSFSGID-AGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNK 101
G + LG + G+ A EE G ++ ++ EQ+ LEK F
Sbjct: 206 GPGALLGPKPKLKGGLGTAVEEGAPSTGVPAPGGKSRRRRTAFTSEQLLELEKEFHCKKY 265
Query: 102 LEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
L + Q+A AL L QV IWFQNRRA+WK
Sbjct: 266 LSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 297
>DICTYBASE|DDB_G0284293 [details] [associations]
symbol:hbx10 "putative homeobox transcription factor"
species:44689 "Dictyostelium discoideum" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 dictyBase:DDB_G0284293 GO:GO:0007275 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000064 eggNOG:COG5576
RefSeq:XP_638704.1 HSSP:P20263 ProteinModelPortal:Q54PU1
EnsemblProtists:DDB0220476 GeneID:8624535 KEGG:ddi:DDB_G0284293
InParanoid:Q54PU1 OMA:DNIVPSI Uniprot:Q54PU1
Length = 638
Score = 111 (44.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 77 AGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
A +KKR R + EQ+ LE+ FE + +++LA LG+ R+V IWFQN+RA+ K
Sbjct: 300 ANKKKRQRTSPEQLAILEQIFETDKMPSQQIRVRLANQLGMSSRRVQIWFQNKRAKVK 357
Score = 63 (27.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 162 NQKLHAEIMALKSREVTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPMSTHPTS 221
N L AE + + E +L + G+ +N S N+++ + + +S+ PT+
Sbjct: 368 NDDLFAEGEDIIDEDEDEDSSLTIDESGNNNNNSGNNNNN--NNNGIMGGHGMLSSSPTN 425
Query: 222 RNLFPTKSTSSVRPTVAAQLFHNSSSSRPDLQCQKIEQNMQGTKDQES 269
N S+ P + + + NSSSS P LQ + N + +
Sbjct: 426 LNTSSDNIVPSISPMLTS-ININSSSSTPTLQSVNLLNNTNNNNNNNN 472
>UNIPROTKB|F1PCY4 [details] [associations]
symbol:GBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 EMBL:AAEX03010280 EMBL:AAEX03010278
EMBL:AAEX03010279 EMBL:AAEX03010281 EMBL:AAEX03010282
Ensembl:ENSCAFT00000007725 OMA:XEADELL Uniprot:F1PCY4
Length = 251
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 43 GVASFLG-KRSMSFS-GIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGN 100
G + LG K + S G A E A + G ++ ++ EQ+ LEK F
Sbjct: 113 GPGALLGPKPKLKGSLGTGAEEGAPVAAGVTAPGGKSRRRRTAFTSEQLLELEKEFHCKK 172
Query: 101 KLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
L + Q+A AL L QV IWFQNRRA+WK
Sbjct: 173 YLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 205
>UNIPROTKB|E1C676 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006711
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04617
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104054 InterPro:IPR017112 PIRSF:PIRSF037109
EMBL:AADN02020025 EMBL:AADN02020026 EMBL:AADN02020027
EMBL:AADN02020028 EMBL:AADN02020029 EMBL:AADN02020030
IPI:IPI00581324 Ensembl:ENSGALT00000029909 OMA:PERTECA
ArrayExpress:E1C676 Uniprot:E1C676
Length = 307
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 241 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 299
Query: 136 QLEKD 140
+ KD
Sbjct: 300 ENNKD 304
>ZFIN|ZDB-GENE-990415-117 [details] [associations]
symbol:hoxd11a "homeo box D11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-117 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOGENOM:HOG000231898
HOVERGEN:HBG052048 KO:K09296 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X GeneTree:ENSGT00700000104263 eggNOG:NOG305087
EMBL:BC114271 EMBL:X87751 EMBL:DQ069272 EMBL:Y14543 IPI:IPI00934960
RefSeq:NP_571242.1 UniGene:Dr.47548 ProteinModelPortal:Q90470
SMR:Q90470 Ensembl:ENSDART00000082344 GeneID:30405 KEGG:dre:30405
CTD:30405 NextBio:20806815 ArrayExpress:Q90470 Bgee:Q90470
Uniprot:Q90470
Length = 276
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 68 DDFSDDGSQAGE-KKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIW 124
D+ + GS A + +K+R + Q++ LE+ F + E+++QL+R L L RQV IW
Sbjct: 192 DEEKNSGSSATKSRKKRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIW 251
Query: 125 FQNRRARWKTKQLEKD 140
FQNRR K K+L +D
Sbjct: 252 FQNRRM--KEKKLNRD 265
>UNIPROTKB|P17277 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:X52670 EMBL:X52747
IPI:IPI00593052 PIR:S09257 RefSeq:NP_001025517.1
RefSeq:XP_003640746.1 UniGene:Gga.4243 ProteinModelPortal:P17277
SMR:P17277 GeneID:100858374 GeneID:395307 KEGG:gga:100858374
KEGG:gga:395307 CTD:3201 eggNOG:NOG257177 InParanoid:P17277
OrthoDB:EOG4GTKF7 NextBio:20815392 Uniprot:P17277
Length = 309
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/100 (30%), Positives = 45/100 (45%)
Query: 34 PSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLE 93
P CA + GK + + + + ++S G + + +QV LE
Sbjct: 168 PGCALLPDKSLPGLKGKEPVVYPWMKKIHVSTVNPNYS--GGEPKRSRTAYTRQQVLELE 225
Query: 94 KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
K F L R++++A L L RQV IWFQNRR +WK
Sbjct: 226 KEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>UNIPROTKB|E2R2R4 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0046622 "positive regulation of
organ growth" evidence=IEA] [GO:0045629 "negative regulation of
T-helper 2 cell differentiation" evidence=IEA] [GO:0045627
"positive regulation of T-helper 1 cell differentiation"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008284 GO:GO:0001889
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0046622 GO:GO:0000976 GO:GO:0048484
GO:GO:0045629 GO:GO:0007519 GO:GO:0045627 GO:GO:0048557
Ensembl:ENSCAFT00000018023 Uniprot:E2R2R4
Length = 405
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/109 (38%), Positives = 59/109 (54%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDK 345
Query: 144 L---KRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINL-NKETE 188
K A AD E + + E + +SR+ +ES+++ +TE
Sbjct: 346 EAGEKPSGGAAAADGEQEERSLSRSEGEAES-ESRD-SESLDMVPSDTE 392
>UNIPROTKB|F1MJX6 [details] [associations]
symbol:HOXA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
EMBL:DAAA02010938 IPI:IPI00692351 UniGene:Bt.59423
Ensembl:ENSBTAT00000001409 NextBio:20877630 Uniprot:F1MJX6
Length = 253
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 142 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 201
Query: 131 RWK 133
+WK
Sbjct: 202 KWK 204
>WB|WBGene00003024 [details] [associations]
symbol:lin-39 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040026
"positive regulation of vulval development" evidence=IGI;IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016477
"cell migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0040025 "vulval development" evidence=IEP]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0051302 "regulation of cell division" evidence=IMP] [GO:0045026
"plasma membrane fusion" evidence=IMP] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0018991 GO:GO:0007411 GO:GO:0007265 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 KO:K09311
GO:GO:0040025 GO:GO:0040027 GO:GO:0040026 GO:GO:0042659
GO:GO:0051302 EMBL:FO080423 GeneTree:ENSGT00700000104189
GO:GO:0045026 eggNOG:NOG236516 EMBL:L19639 EMBL:L19248 PIR:B40722
RefSeq:NP_001021164.1 UniGene:Cel.19645 ProteinModelPortal:P34684
SMR:P34684 IntAct:P34684 MINT:MINT-114843 STRING:P34684
EnsemblMetazoa:C07H6.7.1 EnsemblMetazoa:C07H6.7.2 GeneID:176068
KEGG:cel:CELE_C07H6.7 UCSC:C07H6.7.2 CTD:176068 WormBase:C07H6.7
HOGENOM:HOG000113332 InParanoid:P34684 OMA:KEFHTHK NextBio:890972
Uniprot:P34684
Length = 253
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 71 SDDGSQAGEKKRRL--NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNR 128
S G GEK++R QV LEK F L +R++++A +L L RQV IWFQNR
Sbjct: 157 STTGGSRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNR 216
Query: 129 RARWKTKQLEK 139
R + K + +K
Sbjct: 217 RMKHKKENKDK 227
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 62 EEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
+E+ G+ + GS+A +++ EQ++ LE F N L R+ ++A L L RQV
Sbjct: 159 QESRGKPE---GGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQV 215
Query: 122 AIWFQNRRARWK 133
+WFQNRR +WK
Sbjct: 216 KVWFQNRRMKWK 227
>UNIPROTKB|B7ZAD0 [details] [associations]
symbol:HOXB3 "cDNA, FLJ79144, highly similar to Homeobox
protein Hox-B3" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 EMBL:AC103702 UniGene:Hs.654560 HGNC:HGNC:5114
ChiTaRS:HOXB3 GO:GO:0021546 EMBL:AK316245 IPI:IPI00947155
SMR:B7ZAD0 STRING:B7ZAD0 Ensembl:ENST00000472863
Ensembl:ENST00000489475 Uniprot:B7ZAD0
Length = 358
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARALG 115
G G G D S GS A ++ R Q+ LEK F L R++++A L
Sbjct: 94 GSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLN 153
Query: 116 LQPRQVAIWFQNRRARWKTKQLEK 139
L RQ+ IWFQNRR ++K Q K
Sbjct: 154 LSERQIKIWFQNRRMKYKKDQKAK 177
>ZFIN|ZDB-GENE-980526-214 [details] [associations]
symbol:hoxd4a "homeo box D4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-214 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
HOGENOM:HOG000231179 HOVERGEN:HBG016849 EMBL:BX322661 EMBL:BC162966
EMBL:BC162983 EMBL:BC163059 IPI:IPI00492173 RefSeq:NP_001119917.1
UniGene:Dr.75800 SMR:B0S5Y5 STRING:B0S5Y5
Ensembl:ENSDART00000082355 GeneID:30329 KEGG:dre:30329 CTD:30329
NextBio:20806762 Uniprot:B0S5Y5
Length = 256
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/99 (30%), Positives = 44/99 (44%)
Query: 74 GSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
G + + +QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 163 GPEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 222
Query: 134 TKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMAL 172
KD+ L + + + Q + EI L
Sbjct: 223 -----KDHKLPNTKGRSASVGNQHAQHAQKDSQTEITTL 256
>ZFIN|ZDB-GENE-990415-104 [details] [associations]
symbol:hoxb3a "homeo box B3a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-990415-104
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104189 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 EMBL:AJ537509 EMBL:AL645782
EMBL:BC095559 EMBL:Y13944 EMBL:BK005081 EMBL:BK005082
IPI:IPI00486662 RefSeq:NP_571192.2 UniGene:Dr.132502
ProteinModelPortal:O42368 SMR:O42368 STRING:O42368
Ensembl:ENSDART00000078466 GeneID:30339 KEGG:dre:30339 CTD:30339
InParanoid:O42368 OMA:ATYYDNT OrthoDB:EOG4S4PH1 NextBio:20806770
ArrayExpress:O42368 Bgee:O42368 Uniprot:O42368
Length = 417
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 50 KRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKM 108
+++ S S A E++G + S GS A ++ R Q+ LEK F L R++
Sbjct: 153 QKNSSPSASSANAESSGGEK-SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRV 211
Query: 109 QLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 212 EMANLLNLSERQIKIWFQNRRMKYKKDQKSK 242
>UNIPROTKB|Q9BZE3 [details] [associations]
symbol:BARHL1 "BarH-like 1 homeobox protein" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0001764 GO:GO:0043565
EMBL:CH471090 GO:GO:0043524 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0007605
GO:GO:0030901 eggNOG:NOG263484 KO:K09360 EMBL:AF325688
EMBL:AF321618 EMBL:AK054797 EMBL:AL354735 EMBL:BC136956
EMBL:BC136969 EMBL:AJ237816 IPI:IPI00024060 RefSeq:NP_064448.1
UniGene:Hs.283809 ProteinModelPortal:Q9BZE3 SMR:Q9BZE3
STRING:Q9BZE3 PhosphoSite:Q9BZE3 DMDM:29336920 PaxDb:Q9BZE3
PRIDE:Q9BZE3 Ensembl:ENST00000263610 Ensembl:ENST00000542090
GeneID:56751 KEGG:hsa:56751 UCSC:uc004cbp.1 CTD:56751
GeneCards:GC09P135457 HGNC:HGNC:953 HPA:HPA004809 MIM:605211
neXtProt:NX_Q9BZE3 PharmGKB:PA25257 HOGENOM:HOG000231533
HOVERGEN:HBG050663 InParanoid:Q9BZE3 OMA:DCLETGA OrthoDB:EOG4F4SBJ
PhylomeDB:Q9BZE3 GenomeRNAi:56751 NextBio:62212 ArrayExpress:Q9BZE3
Bgee:Q9BZE3 CleanEx:HS_BARHL1 Genevestigator:Q9BZE3
GermOnline:ENSG00000125492 Uniprot:Q9BZE3
Length = 327
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/144 (30%), Positives = 63/144 (43%)
Query: 18 PHEDEHQTPTSLNP--ILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGS 75
P+ Q P + P L + A +DF G + S S EE + E S D
Sbjct: 113 PYSSSGQ-PAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSP 171
Query: 76 QAGEKKRR-----LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
KK R Q+ LE++FE L + +M+LA +L L QV W+QNRR
Sbjct: 172 PVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRT 231
Query: 131 RWKTKQLEKDYDLLKR--QYEAVK 152
+WK +Q +LL Y A++
Sbjct: 232 KWK-RQTAVGLELLAEAGNYSALQ 254
>UNIPROTKB|A4FUC1 [details] [associations]
symbol:HOXC4 "HOXC4 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 eggNOG:NOG314883
KO:K09304 GO:GO:0048562 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 OMA:ERQYNCA CTD:3221 EMBL:DAAA02012839
EMBL:BC114690 IPI:IPI00729483 RefSeq:NP_001095843.1
UniGene:Bt.29064 STRING:A4FUC1 Ensembl:ENSBTAT00000004277
GeneID:613740 KEGG:bta:613740 InParanoid:A4FUC1 NextBio:20898740
Uniprot:A4FUC1
Length = 264
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 28 SLNPILPSCA-PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNM 86
S +P P+C+ P H +S K+ + + + + +++ G + +
Sbjct: 109 SPSPAPPACSQPAPDHP-SSAASKQPIVYPWMKKIHVSTVNPNYN--GGEPKRSRTAYTR 165
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 166 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|E2QSM9 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA CTD:3221 EMBL:AAEX03014973 RefSeq:XP_543624.1
RefSeq:XP_856443.1 Ensembl:ENSCAFT00000010661 GeneID:486498
KEGG:cfa:486498 NextBio:20860261 Uniprot:E2QSM9
Length = 264
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 28 SLNPILPSCA-PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNM 86
S +P P+C+ P H +S K+ + + + + +++ G + +
Sbjct: 109 SPSPAPPACSQPAPDHP-SSAASKQPIVYPWMKKIHVSTVNPNYN--GGEPKRSRTAYTR 165
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 166 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|P09017 [details] [associations]
symbol:HOXC4 "Homeobox protein Hox-C4" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0051216 eggNOG:NOG314883 KO:K09304 GO:GO:0048562
HOGENOM:HOG000231179 HOVERGEN:HBG016849 OrthoDB:EOG4GTKF7
OMA:ERQYNCA EMBL:X07495 EMBL:AY014298 EMBL:AY014297 EMBL:AC023794
IPI:IPI00295561 PIR:S01030 RefSeq:NP_055435.2 RefSeq:NP_705897.1
UniGene:Hs.549040 ProteinModelPortal:P09017 SMR:P09017
IntAct:P09017 STRING:P09017 PhosphoSite:P09017 DMDM:281185468
PRIDE:P09017 DNASU:3221 Ensembl:ENST00000303406
Ensembl:ENST00000430889 GeneID:3221 KEGG:hsa:3221 UCSC:uc001seu.3
CTD:3221 GeneCards:GC12P054410 H-InvDB:HIX0079410
H-InvDB:HIX0079484 H-InvDB:HIX0171647 HGNC:HGNC:5126 MIM:142974
neXtProt:NX_P09017 PharmGKB:PA29401 InParanoid:P09017
PhylomeDB:P09017 GenomeRNAi:3221 NextBio:12814 Bgee:P09017
Genevestigator:P09017 GermOnline:ENSG00000198353 Uniprot:P09017
Length = 264
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 28 SLNPILPSCA-PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNM 86
S +P P+C+ P H +S K+ + + + + +++ G + +
Sbjct: 109 SPSPAPPACSQPAPDHP-SSAASKQPIVYPWMKKIHVSTVNPNYN--GGEPKRSRTAYTR 165
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 166 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|F1SR58 [details] [associations]
symbol:HOXC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0051216 KO:K09304 GO:GO:0048562
OMA:ERQYNCA EMBL:CU633419 RefSeq:XP_001925163.2
Ensembl:ENSSSCT00000000306 GeneID:100154759 KEGG:ssc:100154759
Uniprot:F1SR58
Length = 264
Score = 124 (48.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 28 SLNPILPSCA-PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNM 86
S +P P+C+ P H +S K+ + + + + +++ G + +
Sbjct: 109 SPSPAPPACSQPAPDHP-SSAASKQPIVYPWMKKIHVSTVNPNYN--GGEPKRSRTAYTR 165
Query: 87 EQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 166 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>UNIPROTKB|E1BRT6 [details] [associations]
symbol:HOXD8 "Homeobox protein Hox-D8" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104054 EMBL:AADN02020025
EMBL:AADN02020026 EMBL:AADN02020027 EMBL:AADN02020028
EMBL:AADN02020029 EMBL:AADN02020030 IPI:IPI00820869
Ensembl:ENSGALT00000038688 ArrayExpress:E1BRT6 Uniprot:E1BRT6
Length = 329
Score = 126 (49.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 78 GEKKRRLNMEQVKTLE--KNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTK 135
G ++ R + +TLE K F L +R+++++ ALGL RQV IWFQNRR +WK K
Sbjct: 265 GRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK-K 323
Query: 136 QLEKD 140
+ KD
Sbjct: 324 ENNKD 328
>UNIPROTKB|F6XFB6 [details] [associations]
symbol:HLX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104097 OMA:AHPHASF Ensembl:ENSCAFT00000018023
EMBL:AAEX03018361 EMBL:AAEX03018362 Uniprot:F6XFB6
Length = 438
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/109 (38%), Positives = 59/109 (54%)
Query: 88 QVKTLEKNFELGNKL-EPERKMQLARALGLQPRQVAIWFQNRRARW---KTKQLEKDYDL 143
Q K LEK FE+ + +P+RK QLA LGL QV +WFQNRR +W K Q +KD D
Sbjct: 287 QRKGLEKRFEIQKYVTKPDRK-QLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDK 345
Query: 144 L---KRQYEAVKADREALQAQNQKLHAEIMALKSREVTESINL-NKETE 188
K A AD E + + E + +SR+ +ES+++ +TE
Sbjct: 346 EAGEKPSGGAAAADGEQEERSLSRSEGEAES-ESRD-SESLDMVPSDTE 392
>UNIPROTKB|F1MY80 [details] [associations]
symbol:LOC100847795 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 GeneTree:ENSGT00700000104054 OMA:CGVMRGC
GO:GO:0021520 EMBL:DAAA02012841 EMBL:DAAA02012842 EMBL:DAAA02012843
IPI:IPI00705105 Ensembl:ENSBTAT00000004243 Uniprot:F1MY80
Length = 294
Score = 125 (49.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 16 QTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-G 74
QTP +E +T +L P +P + + S S +A EE E+ +
Sbjct: 159 QTPSPNEIKTEQNLAG--PKGSPLESEKDRAKTADSSPDTSDNEAKEEIKAENTTGNWLT 216
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++ + L RQV IWFQNRR + K
Sbjct: 217 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 276
Query: 134 TKQLE 138
E
Sbjct: 277 KMNRE 281
>UNIPROTKB|F1NVB2 [details] [associations]
symbol:TLX3 "T-cell leukemia homeobox protein 3"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104454 EMBL:AADN02035942 IPI:IPI00814284
Ensembl:ENSGALT00000003427 OMA:LAFPIAR ArrayExpress:F1NVB2
Uniprot:F1NVB2
Length = 136
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 80 KKRRLNMEQVKT--LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 137
KK R + +V+ LEK F L + LA++L + QV WFQNRR +W+ +
Sbjct: 12 KKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTA 71
Query: 138 EKDYDLLKRQYEAVKADREALQAQN 162
E+ R+ E +A R LQ Q+
Sbjct: 72 EE------REAERQQASRLMLQLQH 90
>ZFIN|ZDB-GENE-990415-112 [details] [associations]
symbol:hoxc4a "homeo box C4a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-112 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00700000104090
eggNOG:NOG314883 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 EMBL:BX005254 EMBL:AF071264 EMBL:BC092923
EMBL:DQ060552 EMBL:Y14545 IPI:IPI00489611 RefSeq:NP_571197.1
UniGene:Dr.159439 ProteinModelPortal:Q9PWM3 SMR:Q9PWM3
Ensembl:ENSDART00000103132 GeneID:30345 KEGG:dre:30345 CTD:30345
InParanoid:A2BE61 OMA:ERQYNCA NextBio:20806775 Bgee:Q9PWM3
Uniprot:Q9PWM3
Length = 268
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G++ + +QV LEK F L R++++A +L L RQ+ IWFQNRR
Sbjct: 148 SYNGAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRM 207
Query: 131 RWK 133
+WK
Sbjct: 208 KWK 210
>UNIPROTKB|E1U314 [details] [associations]
symbol:Hoxa5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060764 "cell-cell
signaling involved in mammary gland development" evidence=IEA]
[GO:0060749 "mammary gland alveolus development" evidence=IEA]
[GO:0060644 "mammary gland epithelial cell differentiation"
evidence=IEA] [GO:0060638 "mesenchymal-epithelial cell signaling"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0060535 "trachea cartilage morphogenesis"
evidence=IEA] [GO:0060484 "lung-associated mesenchyme development"
evidence=IEA] [GO:0060480 "lung goblet cell differentiation"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060435 "bronchiole
development" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0045639 "positive regulation of myeloid cell
differentiation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0033599 "regulation of mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0016477
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0043065 GO:GO:0048286 GO:GO:0035264 GO:GO:0003016
GO:GO:0016525 GO:GO:0060749 GO:GO:0060644 GO:GO:0048704
GO:GO:0033599 GO:GO:0060441 GO:GO:0060484 GO:GO:0030878
GO:GO:0010870 GeneTree:ENSGT00700000104189 GO:GO:0045639
GO:GO:0045647 GO:GO:0060574 OMA:YRDSASM CTD:3202 KO:K09305
GO:GO:0060435 GO:GO:0060764 GO:GO:0060480 GO:GO:0060638
GO:GO:0060535 EMBL:CU570959 EMBL:EU914851 EMBL:EU914852
RefSeq:NP_001182161.1 UniGene:Ssc.47987 Ensembl:ENSSSCT00000018184
GeneID:100499568 KEGG:ssc:100499568 Uniprot:E1U314
Length = 270
Score = 119 (46.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 74 GSQAGEKKRRLNME-QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
G G++ R Q LEK F L R++++A AL L RQ+ IWFQNRR +W
Sbjct: 191 GGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKW 250
Query: 133 K 133
K
Sbjct: 251 K 251
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/51 (27%), Positives = 17/51 (33%)
Query: 5 GMAFFPTNFMLQTPHEDEHQTPTSLNP---ILPSCAPQDFHGVASFLGKRS 52
G + PT P H P P + PS HG + LG S
Sbjct: 76 GASAAPTEPRYSQPATSTHSPPPDPLPCSAVAPSPGSDSHHGGKNSLGNSS 126
>ZFIN|ZDB-GENE-020509-2 [details] [associations]
symbol:gbx2 "gastrulation brain homeo box 2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-020509-2 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030902 HOVERGEN:HBG003967 KO:K09321
GeneTree:ENSGT00660000095141 CTD:2637 OMA:HQEAARK HSSP:P14653
EMBL:CR847983 EMBL:BC059413 EMBL:AB075028 IPI:IPI00494659
RefSeq:NP_694496.1 UniGene:Dr.17548 SMR:Q8QGU1 STRING:Q8QGU1
Ensembl:ENSDART00000015333 GeneID:245948 KEGG:dre:245948
InParanoid:Q8QGU1 NextBio:20797200 Uniprot:Q8QGU1
Length = 342
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 57 GIDAGEEA-NGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 115
G+D G NG + + G ++ EQ+ LEK F L + Q+A AL
Sbjct: 221 GLDDGVHGGNGAGNTTSTGKNR-RRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALK 279
Query: 116 LQPRQVAIWFQNRRARWK 133
L QV IWFQNRRA+WK
Sbjct: 280 LSEVQVKIWFQNRRAKWK 297
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/109 (32%), Positives = 52/109 (47%)
Query: 28 SLNPILPSCAPQDFHGVA---SFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL 84
S P +C P D+ A + KRS D+ + G S+ S+ +++
Sbjct: 135 SSTPTGAACPPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYK-SEVNSKPRKERTAF 193
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
EQ++ LE F N L R+ ++A L L RQV +WFQNRR +WK
Sbjct: 194 TKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>FB|FBgn0011278 [details] [associations]
symbol:lbe "ladybird early" species:7227 "Drosophila
melanogaster" [GO:0007483 "genital disc morphogenesis"
evidence=IMP] [GO:0008544 "epidermis development" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007517 "muscle organ development"
evidence=IMP;TAS] [GO:0007507 "heart development" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007501 "mesodermal cell fate specification" evidence=TAS]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0051450 "myoblast
proliferation" evidence=IGI] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0016477 "cell migration"
evidence=IGI] [GO:0007520 "myoblast fusion" evidence=IGI]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0045664 GO:GO:0007507 GO:GO:0016477 GO:GO:0007417
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007501
GO:GO:0000122 GO:GO:0048813 GO:GO:0007520 GO:GO:0008544
GO:GO:0000976 GO:GO:0007480 GeneTree:ENSGT00700000104206
GO:GO:0042659 GO:GO:0007483 GO:GO:0051450 FlyBase:FBgn0011278
EMBL:BT126373 RefSeq:NP_524435.2 UniGene:Dm.2383 SMR:Q7KS77
STRING:Q7KS77 EnsemblMetazoa:FBtr0084091 GeneID:42542
KEGG:dme:Dmel_CG6545 UCSC:CG6545-RA CTD:42542 InParanoid:Q7KS77
OMA:SPAESEI GenomeRNAi:42542 NextBio:829333 Uniprot:Q7KS77
Length = 479
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 53 MSFSGIDAGEEANGEDDFSDDGSQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQL 110
M+ D ++ + D FS+ ++K R Q+ LEK F L P + ++
Sbjct: 327 MTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEI 386
Query: 111 ARALGLQPRQVAIWFQNRRARWKT--KQLEKDYDLLK 145
A +LGL QV WFQNRRA+ K ++L+KD+D +K
Sbjct: 387 AASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVK 423
>UNIPROTKB|P24342 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HOVERGEN:HBG052048 KO:K09296
InterPro:IPR021918 Pfam:PF12045 EMBL:M81249 EMBL:D10288
IPI:IPI00583692 PIR:B37914 RefSeq:NP_989951.1 UniGene:Gga.958
ProteinModelPortal:P24342 SMR:P24342 STRING:P24342 GeneID:395328
KEGG:gga:395328 CTD:3237 eggNOG:NOG244779 NextBio:20815413
Uniprot:P24342
Length = 280
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 63 EANGEDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQV 121
EA E S Q KKR Q++ LE+ F + E+++QL+R L L RQV
Sbjct: 193 EAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQV 252
Query: 122 AIWFQNRRARWKTKQLEKD 140
IWFQNRR K K+L +D
Sbjct: 253 KIWFQNRRM--KEKKLNRD 269
>UNIPROTKB|H0YIA6 [details] [associations]
symbol:HOXA11 "Homeobox protein Hox-A11" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0005730
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080 InterPro:IPR021918
Pfam:PF12045 HGNC:HGNC:5101 ChiTaRS:HOXA11 Ensembl:ENST00000517402
Uniprot:H0YIA6
Length = 283
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 62 EEANG--EDDFSDDGSQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 118
E ++G ED Q KKR Q++ LE+ F + E+++QL+R L L
Sbjct: 193 ESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTD 252
Query: 119 RQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K++ +D
Sbjct: 253 RQVKIWFQNRRM--KEKKINRD 272
>ZFIN|ZDB-GENE-000823-8 [details] [associations]
symbol:hoxa11a "homeo box A11a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000823-8
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG286554 HOGENOM:HOG000231898
HOVERGEN:HBG052048 InterPro:IPR021918 Pfam:PF12045
OrthoDB:EOG4KKZ3X EMBL:CR382300 EMBL:AF071240 EMBL:AF287138
IPI:IPI00484931 RefSeq:NP_571619.1 UniGene:Dr.85394
ProteinModelPortal:Q9DDU0 SMR:Q9DDU0 GeneID:58061 KEGG:dre:58061
CTD:58061 NextBio:20892323 ArrayExpress:Q9DDU0 Uniprot:Q9DDU0
Length = 284
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 62 EEANGEDDFSDDGSQAGEKKRRLNME----QVKTLEKNFELGNKLEPERKMQLARALGLQ 117
E ++G ++ G+ +G + R+ Q++ LE+ F + E+++QL+R L L
Sbjct: 193 ESSSGNNEEKTSGANSGPRFRKKRCPYTKFQIRELEREFFFSVYINKEKRLQLSRMLNLT 252
Query: 118 PRQVAIWFQNRRARWKTKQLEKD 140
RQV +WFQNRR K K+L +D
Sbjct: 253 DRQVKMWFQNRRM--KEKKLNRD 273
>MGI|MGI:96176 [details] [associations]
symbol:Hoxa4 "homeobox A4" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 InterPro:IPR017995
Pfam:PF00046 PRINTS:PR00025 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96176 GO:GO:0005634
GO:GO:0009952 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 GO:GO:0048704
KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849 CTD:3201
eggNOG:NOG257177 OrthoDB:EOG4GTKF7 EMBL:S70444 EMBL:S67058
EMBL:AK076098 EMBL:X66861 EMBL:X13538 EMBL:X17346 EMBL:M27432
EMBL:M13813 IPI:IPI00128156 PIR:A43556 RefSeq:NP_032291.1
UniGene:Mm.439647 ProteinModelPortal:P06798 SMR:P06798
STRING:P06798 PhosphoSite:P06798 PRIDE:P06798
Ensembl:ENSMUST00000101395 GeneID:15401 KEGG:mmu:15401
UCSC:uc009byf.1 InParanoid:P06798 NextBio:288098 Bgee:P06798
CleanEx:MM_HOXA4 Genevestigator:P06798
GermOnline:ENSMUSG00000000942 Uniprot:P06798
Length = 285
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 174 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 233
Query: 131 RWK 133
+WK
Sbjct: 234 KWK 236
>UNIPROTKB|E9PT77 [details] [associations]
symbol:LOC100360577 "Protein LOC100360577" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 RGD:2321880
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 GO:GO:0048704 KO:K09304 OMA:PPGKPQT
UniGene:Rn.224463 EMBL:AC122669 IPI:IPI00382378
RefSeq:XP_002729358.1 RefSeq:XP_003749796.1
Ensembl:ENSRNOT00000038775 GeneID:100360577 GeneID:100912525
KEGG:rno:100360577 KEGG:rno:100912525 ArrayExpress:E9PT77
Uniprot:E9PT77
Length = 285
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 174 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 233
Query: 131 RWK 133
+WK
Sbjct: 234 KWK 236
>ZFIN|ZDB-GENE-060421-3623 [details] [associations]
symbol:pitx1 "paired-like homeodomain
transcription factor 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR016233
InterPro:IPR017970 Pfam:PF00046 PIRSF:PIRSF000563 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-060421-3623
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG068770 OMA:CKNSYLP
GeneTree:ENSGT00700000104438 EMBL:CABZ01050114 EMBL:CABZ01050115
EMBL:EU580407 IPI:IPI00632106 UniGene:Dr.93570 STRING:B2LT56
Ensembl:ENSDART00000062803 Uniprot:B2LT56
Length = 285
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/118 (25%), Positives = 53/118 (44%)
Query: 38 PQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRR-------LNMEQVK 90
P+ L S S +A E+ + SDDG+ KK++ +Q++
Sbjct: 12 PRSASSTRETLENTSSESSDTEAAEKERSVEQRSDDGNADDPKKKKQRRQRTHFTSQQLQ 71
Query: 91 TLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQY 148
LE F+ + + ++A L +V +WF+NRRA+W+ ++ + DL K Y
Sbjct: 72 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQMDLCKNSY 129
>UNIPROTKB|Q00056 [details] [associations]
symbol:HOXA4 "Homeobox protein Hox-A4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 EMBL:CH471073 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009653
GO:GO:0048704 KO:K09304 EMBL:AC004080 HOGENOM:HOG000231179
HOVERGEN:HBG016849 CTD:3201 eggNOG:NOG257177 OrthoDB:EOG4GTKF7
EMBL:M74297 EMBL:M28199 IPI:IPI00020926 PIR:A39724
RefSeq:NP_002132.3 UniGene:Hs.533357 UniGene:Hs.721126
ProteinModelPortal:Q00056 SMR:Q00056 STRING:Q00056
PhosphoSite:Q00056 DMDM:116242514 PaxDb:Q00056 PeptideAtlas:Q00056
PRIDE:Q00056 DNASU:3201 Ensembl:ENST00000360046
Ensembl:ENST00000428284 GeneID:3201 KEGG:hsa:3201 UCSC:uc003sym.4
GeneCards:GC07M027170 HGNC:HGNC:5105 MIM:142953 neXtProt:NX_Q00056
PharmGKB:PA29382 InParanoid:Q00056 OMA:PPGKPQT PhylomeDB:Q00056
GenomeRNAi:3201 NextBio:12736 ArrayExpress:Q00056 Bgee:Q00056
CleanEx:HS_HOXA4 Genevestigator:Q00056 GermOnline:ENSG00000197576
Uniprot:Q00056
Length = 320
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 71 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
S +G + + +QV LEK F L R++++A L L RQV IWFQNRR
Sbjct: 209 SYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRM 268
Query: 131 RWKTKQLEKDYDLLKRQYEAVKADREA-LQAQNQKLHAEIMALKSREVTESI 181
+WK + + + A Q Q+ LH S V SI
Sbjct: 269 KWKKDHKLPNTKMRSSNSASASAGPPGKAQTQSPHLHPHPHPSTSTPVPSSI 320
>UNIPROTKB|F1NZJ3 [details] [associations]
symbol:HOXD4 "Homeobox protein Hox-D4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00700000104090 KO:K09304
UniGene:Gga.54375 CTD:3233 EMBL:AADN02020023 IPI:IPI01017209
RefSeq:NP_001012293.1 RefSeq:XP_421990.1 Ensembl:ENSGALT00000038691
GeneID:424139 KEGG:gga:424139 OMA:SRACSQQ NextBio:20826511
Uniprot:F1NZJ3
Length = 237
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
GE KR +QV LEK F L R++++A L L RQ+ IWFQNRR +WK
Sbjct: 144 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 202
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/113 (33%), Positives = 64/113 (56%)
Query: 72 DDGSQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKM--QLARALGLQPRQVAIWFQN 127
+D S+AG K+ R + +Q++TL+ ++ N +P R + QL+ GL R V +WFQN
Sbjct: 125 NDDSEAGAKRPRTTITAKQLETLKNAYK--NSPKPARHVREQLSSETGLDMRVVQVWFQN 182
Query: 128 RRARWKTKQLEKDYDLLK--RQYEAVKADREALQAQNQKLHAEIMALKSREVT 178
RRA K K+L+KD + + Y++VK R A + + + AE + E++
Sbjct: 183 RRA--KEKRLKKDAGRHRWGQFYKSVKRSRGAGKLEKES-SAEDCGVSDSELS 232
>WB|WBGene00000451 [details] [associations]
symbol:ceh-30 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 66 GEDDFSDDGSQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAI 123
G D GS +K R +Q++ LE FE L + +M LA +GL QV
Sbjct: 82 GGDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKT 141
Query: 124 WFQNRRARWKTKQLEKDYDLL 144
W+QNRR +WK +Q DLL
Sbjct: 142 WYQNRRTKWK-RQATSGMDLL 161
>UNIPROTKB|Q22909 [details] [associations]
symbol:ceh-30 "Homeobox protein ceh-30" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0007548 "sex differentiation" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 GO:GO:0007399 GO:GO:0030154 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0007548 eggNOG:NOG263484
EMBL:FO080757 PIR:T25610 RefSeq:NP_508524.2
ProteinModelPortal:Q22909 SMR:Q22909 STRING:Q22909 PaxDb:Q22909
PRIDE:Q22909 EnsemblMetazoa:C33D12.7 GeneID:191620
KEGG:cel:CELE_C33D12.7 UCSC:C33D12.7 CTD:191620 WormBase:C33D12.7
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 InParanoid:Q22909
OMA:MDLAHRM NextBio:949706 Uniprot:Q22909
Length = 237
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 30/81 (37%), Positives = 40/81 (49%)
Query: 66 GEDDFSDDGSQAGEKKRR--LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAI 123
G D GS +K R +Q++ LE FE L + +M LA +GL QV
Sbjct: 82 GGDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKT 141
Query: 124 WFQNRRARWKTKQLEKDYDLL 144
W+QNRR +WK +Q DLL
Sbjct: 142 WYQNRRTKWK-RQATSGMDLL 161
>RGD|1310780 [details] [associations]
symbol:Hoxb3 "homeo box B3" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0021546 "rhombomere development"
evidence=IEA;ISO] [GO:0021615 "glossopharyngeal nerve
morphogenesis" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060216 "definitive hemopoiesis"
evidence=IEA;ISO] [GO:0060324 "face development" evidence=IEA;ISO]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1310780 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0051216 GO:GO:0060324 GO:GO:0048704 GO:GO:0000979
GO:GO:0060216 GO:GO:0050767 GO:GO:0030878
GeneTree:ENSGT00700000104189 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 InterPro:IPR025281 Pfam:PF13293 GO:GO:0021615
OrthoDB:EOG4S4PH1 GO:GO:0021546 EMBL:BC166859 IPI:IPI00194971
UniGene:Rn.208556 SMR:B2RYQ0 STRING:B2RYQ0
Ensembl:ENSRNOT00000011027 Genevestigator:B2RYQ0 Uniprot:B2RYQ0
Length = 428
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/85 (36%), Positives = 41/85 (48%)
Query: 56 SGIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARAL 114
S G G D S GS A ++ R Q+ LEK F L R++++A L
Sbjct: 164 SSSGGGGSGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLL 223
Query: 115 GLQPRQVAIWFQNRRARWKTKQLEK 139
L RQ+ IWFQNRR ++K Q K
Sbjct: 224 NLSERQIKIWFQNRRMKYKKDQKAK 248
>UNIPROTKB|P23682 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 eggNOG:NOG284589
HOGENOM:HOG000252944 HOVERGEN:HBG107984 KO:K09303
InterPro:IPR025281 Pfam:PF13293 OrthoDB:EOG4S4PH1 EMBL:X74506
EMBL:X52749 IPI:IPI00594134 PIR:S10885 PIR:S71480
RefSeq:NP_990074.1 UniGene:Gga.2648 ProteinModelPortal:P23682
SMR:P23682 STRING:P23682 GeneID:395502 KEGG:gga:395502 CTD:3213
InParanoid:P23682 NextBio:20815581 Uniprot:P23682
Length = 399
Score = 125 (49.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 26 PTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRL- 84
PTS+ PS Q F + + S S + E +GE + GS A ++ R
Sbjct: 112 PTSVQT--PSLTKQIFPWMKESR-QNSKQKSSSPSTETCSGEK--TPPGSSASKRARTAY 166
Query: 85 NMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEK 139
Q+ LEK F L R++++A L L RQ+ IWFQNRR ++K Q K
Sbjct: 167 TSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKSK 221
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 214 PMSTHPTSRNLFPTKST 230
P HPT +L+P + T
Sbjct: 367 PCEPHPTYTDLWPAQPT 383
>UNIPROTKB|P14651 [details] [associations]
symbol:HOXB3 "Homeobox protein Hox-B3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0021546 "rhombomere development"
evidence=IEA] [GO:0021615 "glossopharyngeal nerve morphogenesis"
evidence=IEA] [GO:0030878 "thyroid gland development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050767 "regulation of neurogenesis" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0060216 "definitive
hemopoiesis" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 EMBL:CH471109 GO:GO:0051216 GO:GO:0060324
GO:GO:0048704 GO:GO:0000979 GO:GO:0060216 GO:GO:0050767
GO:GO:0030878 eggNOG:NOG284589 HOGENOM:HOG000252944
HOVERGEN:HBG107984 KO:K09303 InterPro:IPR025281 Pfam:PF13293
GO:GO:0021615 OMA:ATYYDNT OrthoDB:EOG4S4PH1 CTD:3213 EMBL:X16667
EMBL:U59298 EMBL:AF287967 EMBL:AK291182 EMBL:AK315102 EMBL:X16175
IPI:IPI00027259 PIR:S07543 RefSeq:NP_002137.4 UniGene:Hs.654560
ProteinModelPortal:P14651 SMR:P14651 STRING:P14651 DMDM:215274007
PaxDb:P14651 PRIDE:P14651 DNASU:3213 Ensembl:ENST00000311626
Ensembl:ENST00000470495 Ensembl:ENST00000476342
Ensembl:ENST00000498678 GeneID:3213 KEGG:hsa:3213 UCSC:uc002inn.3
GeneCards:GC17M046626 HGNC:HGNC:5114 HPA:CAB009860 MIM:142966
neXtProt:NX_P14651 PharmGKB:PA29390 InParanoid:P14651
PhylomeDB:P14651 ChiTaRS:HOXB3 GenomeRNAi:3213 NextBio:12784
ArrayExpress:P14651 Bgee:P14651 CleanEx:HS_HOXB3
Genevestigator:P14651 GermOnline:ENSG00000120093 GO:GO:0021546
Uniprot:P14651
Length = 431
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 57 GIDAGEEANGEDDFSDDGSQAGEKKRRL-NMEQVKTLEKNFELGNKLEPERKMQLARALG 115
G G G D S GS A ++ R Q+ LEK F L R++++A L
Sbjct: 167 GSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLN 226
Query: 116 LQPRQVAIWFQNRRARWKTKQLEK 139
L RQ+ IWFQNRR ++K Q K
Sbjct: 227 LSERQIKIWFQNRRMKYKKDQKAK 250
>WB|WBGene00000452 [details] [associations]
symbol:ceh-31 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG263484 EMBL:FO080757
GeneTree:ENSGT00700000104454 HOGENOM:HOG000020180 PIR:T25611
RefSeq:NP_508525.3 ProteinModelPortal:Q22910 SMR:Q22910
PaxDb:Q22910 EnsemblMetazoa:C33D12.1 GeneID:191621
KEGG:cel:CELE_C33D12.1 UCSC:C33D12.1 CTD:191621 WormBase:C33D12.1
InParanoid:Q22910 OMA:MELAHRM NextBio:949710 Uniprot:Q22910
Length = 260
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 74 GSQAGEKKRRLNME-QVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARW 132
GS+ K R + + Q++ LE FE L + +M+LA +GL QV W+QNRR +W
Sbjct: 90 GSKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKW 149
Query: 133 KTKQLEKDYDLL 144
K +Q DLL
Sbjct: 150 K-RQASVGMDLL 160
>UNIPROTKB|F1S0T9 [details] [associations]
symbol:BARHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0043565 GO:GO:0043524
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0007605 GO:GO:0030901
GeneTree:ENSGT00700000104206 KO:K09360 CTD:56751 OMA:DCLETGA
EMBL:CU326339 RefSeq:XP_001929470.1 Ensembl:ENSSSCT00000006301
GeneID:100152288 KEGG:ssc:100152288 Uniprot:F1S0T9
Length = 327
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 44/144 (30%), Positives = 63/144 (43%)
Query: 18 PHEDEHQTPTSLNP--ILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDDGS 75
P+ Q P + P L + A +DF G + S S EE + E S D
Sbjct: 113 PYSSSGQ-PAAPEPGGRLTAKAGEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSP 171
Query: 76 QAGEKKRR-----LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 130
KK R Q+ LE++FE L + +M+LA +L L QV W+QNRR
Sbjct: 172 PVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRT 231
Query: 131 RWKTKQLEKDYDLLKR--QYEAVK 152
+WK +Q +LL Y A++
Sbjct: 232 KWK-RQTAVGLELLAEAGNYSALQ 254
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 92 LEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRAR 131
LEK F + RK +LA LGL RQV IWFQNRRA+
Sbjct: 16 LEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAK 55
>UNIPROTKB|F1NZL9 [details] [associations]
symbol:LOC100857765 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00660000095141 OMA:RRIRMRR
EMBL:AADN02056979 EMBL:AADN02056980 IPI:IPI00821562
Ensembl:ENSGALT00000038656 Uniprot:F1NZL9
Length = 78
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 28/67 (41%), Positives = 33/67 (49%)
Query: 74 GSQAGEKKRR----LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRR 129
G A K RR EQ+ LE F L ++ LA +L L QV IWFQNRR
Sbjct: 8 GGSALXKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRR 67
Query: 130 ARWKTKQ 136
+WK KQ
Sbjct: 68 TKWK-KQ 73
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 47 FLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKR---RLNMEQVKTLEKNFELGNKLE 103
+LG R F G D E+ F + A + KR + Q+ LE FE + +
Sbjct: 11 YLGHR---FQGNDTSPES-----FLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVV 62
Query: 104 PERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKD 140
+ QLA +L L QV +WFQNRR ++K ++LE++
Sbjct: 63 GAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEE 99
>UNIPROTKB|H9L0A6 [details] [associations]
symbol:HOXC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001759 "organ induction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009954 "proximal/distal
pattern formation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal joint
morphogenesis" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
KO:K09296 InterPro:IPR021918 Pfam:PF12045
GeneTree:ENSGT00700000104263 CTD:3227 OMA:EEHTNSG EMBL:AADN02039879
RefSeq:XP_428250.2 Ensembl:ENSGALT00000022365 GeneID:430698
KEGG:gga:430698 Uniprot:H9L0A6
Length = 300
Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 60 AGEEANGEDDFSDDGSQAGEKKRRLNME--QVKTLEKNFELGNKLEPERKMQLARALGLQ 117
+ N E S + S +K+R Q++ LE+ F + E+++QL+R L L
Sbjct: 209 SSSSVNKEGSKSSNSSAPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLT 268
Query: 118 PRQVAIWFQNRRARWKTKQLEKD 140
RQV IWFQNRR K K+L +D
Sbjct: 269 DRQVKIWFQNRRM--KEKKLSRD 289
>UNIPROTKB|P14840 [details] [associations]
symbol:HOXB4 "Homeobox protein Hox-B4" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001827 InterPro:IPR009057
InterPro:IPR017970 InterPro:IPR017995 Pfam:PF00046 PRINTS:PR00025
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 KO:K09304 HOGENOM:HOG000231179 HOVERGEN:HBG016849
OrthoDB:EOG4GTKF7 CTD:3214 EMBL:X17612 IPI:IPI00572832 PIR:S10092
RefSeq:NP_990624.1 UniGene:Gga.39784 ProteinModelPortal:P14840
SMR:P14840 STRING:P14840 GeneID:396230 KEGG:gga:396230
eggNOG:NOG297644 InParanoid:P14840 NextBio:20816282 Uniprot:P14840
Length = 245
Score = 122 (48.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 78 GEKKRR---LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
GE KR +QV LEK F L R++++A +L L RQ+ IWFQNRR +WK
Sbjct: 148 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>UNIPROTKB|E2QUE0 [details] [associations]
symbol:HOXC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050905 "neuromuscular process" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009952 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030326 GO:GO:0001501 GO:GO:0050905 GO:GO:0009954
GO:GO:0019907 KO:K09295 GeneTree:ENSGT00700000104054 CTD:3226
OMA:CGVMRGC GO:GO:0021520 EMBL:AAEX03014974 RefSeq:XP_543626.3
Ensembl:ENSCAFT00000010694 GeneID:486500 KEGG:cfa:486500
NextBio:20860264 Uniprot:E2QUE0
Length = 342
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/125 (32%), Positives = 58/125 (46%)
Query: 16 QTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEANGEDDFSDD-G 74
QTP E +T SL P +P + + S S +A EE E+ +
Sbjct: 207 QTPSPGEIKTEQSLAG--PKGSPLEGDKERARAADSSPDTSDNEAKEEIKAENTTGNWLT 264
Query: 75 SQAGEKKR-RLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWK 133
+++G KKR Q LEK F L ER++++++ + L RQV IWFQNRR + K
Sbjct: 265 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLK 324
Query: 134 TKQLE 138
E
Sbjct: 325 KMNRE 329
WARNING: HSPs involving 441 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.127 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 23 0.44 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 691
No. of states in DFA: 602 (64 KB)
Total size of DFA: 217 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.96u 0.10s 37.06t Elapsed: 00:00:04
Total cpu time: 36.98u 0.10s 37.08t Elapsed: 00:00:04
Start: Mon May 20 15:50:09 2013 End: Mon May 20 15:50:13 2013
WARNINGS ISSUED: 2