BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022704
(293 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 172/239 (71%), Positives = 176/239 (73%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDREGAGKHI+AGAKKV+ITAPGKGDIPTYVVGVNADAY DEPIISNASCTTNC
Sbjct: 99 GTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNC 158
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 159 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAV 218
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFR+SA+ ELKGIL VC
Sbjct: 219 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVC 278
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVSVDFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK
Sbjct: 279 DEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 337
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 332 bits (851), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/239 (69%), Positives = 173/239 (72%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNC
Sbjct: 98 GTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAV 217
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVC
Sbjct: 218 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 277
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 278 DEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 332 bits (851), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/239 (69%), Positives = 173/239 (72%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNC
Sbjct: 98 GTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDAAHRDLRRARAACLNIVPTSTGAAKAV 217
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVC
Sbjct: 218 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 277
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 278 DEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/239 (69%), Positives = 173/239 (72%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNC
Sbjct: 98 GTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAV 217
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVC
Sbjct: 218 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 277
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 278 DEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 331 bits (848), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/239 (69%), Positives = 173/239 (72%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNC
Sbjct: 98 GTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 157
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 158 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAV 217
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVC
Sbjct: 218 ALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVC 277
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 278 DEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 336
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 330 bits (846), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/239 (69%), Positives = 172/239 (71%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNC 114
GTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNC
Sbjct: 96 GTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST
Sbjct: 156 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NGIALRVPTPN SKKTFAEEVNAAFRESAD ELKGILSVC
Sbjct: 216 ALVLPQLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADQELKGILSVC 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 293
DEPLVS+DFRC MGDDMVKVIAWYDNEWGYSQRVVDLADIVAN W+
Sbjct: 276 DEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKWQ 334
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/241 (60%), Positives = 156/241 (64%), Gaps = 3/241 (1%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPD-EPIISNASCTT 112
GTGVFVD GAGKHIQAGAKKV+ITAP KG DIPTYVVGVN Y D IISNASCTT
Sbjct: 98 GTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTT 157
Query: 113 NCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXX 172
NCLAPFVKVLD++ GI+KGTMTTTHSYTGDQ NIVPTST
Sbjct: 158 NCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAK 217
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSK-KTFAEEVNAAFRESADNELKGIL 231
NGIALRVPTPN K AE+VN AFR++A LKG+L
Sbjct: 218 AVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVL 277
Query: 232 SVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANN 291
VCD PLVSVDFRC MG DMVKV+AWYDNEWGYSQRVVDLAD+VAN
Sbjct: 278 DVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANK 337
Query: 292 W 292
W
Sbjct: 338 W 338
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 231 bits (590), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 141/239 (58%), Gaps = 2/239 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYK-PDEPIISNASCTTN 113
TGVFV EGA KHIQAGAKKVLITAPGKG+ + TYV+GVN Y+ D +ISNASCTTN
Sbjct: 99 TGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158
Query: 114 CLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXX 173
CLAP KVL FGIIKGTMTTTHSYT DQ NIVPT+T
Sbjct: 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKA 218
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSV 233
NGIALRVPTPN K T E+VN ++++ +KGI+
Sbjct: 219 VALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKY 278
Query: 234 CDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 292
D PLVS DFR M D+VKVIAWYDNEWGYSQRVVDLA++ A W
Sbjct: 279 SDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAARKW 337
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 139/236 (58%), Gaps = 2/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYK-PDEPIISNASCTTN 113
TGVFV EGA KHIQAGAKKVLITAPGK + + TYV+GVN Y+ D +ISNASCTTN
Sbjct: 99 TGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158
Query: 114 CLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXX 173
CLAP KVL FGIIKGTMTTTHSYT DQ NIVPT+T
Sbjct: 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKA 218
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSV 233
NGIALRVPTPN K T E+VN ++++ +KGI+
Sbjct: 219 VALVIPELKGKLNGIALRVPTPNVSVVDLVVQVEKPTITEQVNEVLQKASQTTMKGIIKY 278
Query: 234 CDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 289
D PLVS DFR M D+VKVIAWYDNEWGYSQRVVDLA++ A
Sbjct: 279 SDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYDNEWGYSQRVVDLAELAA 334
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 136/236 (57%), Gaps = 1/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TG F RE A KH++AGAKKV+I+AP K + T V+GVN D Y P +ISNASCTTNC
Sbjct: 96 TGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPF KVL ++FGI++G MTT HSYT DQ +I+PT+T
Sbjct: 156 LAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDASHKDLRRARAAAESIIPTTTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+
Sbjct: 216 ALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYS 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 276 EEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 136/236 (57%), Gaps = 1/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TG F RE A KH++AGAKKV+I+AP K + T V+GVN D Y P +ISNASCTTNC
Sbjct: 96 TGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPF KVL ++FGI++G MTT HSYT DQ +I+PT+T
Sbjct: 156 LAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDASHKDLRRARAAAESIIPTTTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+
Sbjct: 216 ALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYS 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 276 EEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 136/236 (57%), Gaps = 1/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TG F RE A KH++AGAKKV+I+AP K + T V+GVN D Y P +ISNASCTTNC
Sbjct: 96 TGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPF KVL ++FGI++G MTT HSYT DQ +I+PT+T
Sbjct: 156 LAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+
Sbjct: 216 ALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYS 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 276 EEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 135/236 (57%), Gaps = 1/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TG F RE A KH++AGAKKV+I+AP K + T V+GVN D Y P +ISNAS TTNC
Sbjct: 96 TGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASATTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPF KVL ++FGI++G MTT HSYT DQ +I+PT+T
Sbjct: 156 LAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+
Sbjct: 216 ALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYS 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 276 EEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 135/236 (57%), Gaps = 1/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TG F RE A KH++AGAKKV+I+AP K + T V+GVN D Y P +ISNAS TTNC
Sbjct: 96 TGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASSTTNC 155
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAPF KVL ++FGI++G MTT HSYT DQ +I+PT+T
Sbjct: 156 LAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG+A+RVPTPN K+ EEVNAA + +A+ ELKGIL+
Sbjct: 216 ALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYS 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+EPLVS D+ + MVKV++WYDNE GYS RVVDLA +A+
Sbjct: 276 EEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIAS 331
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 194 bits (492), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 131/233 (56%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF +RE A H+QAGAKKV+ITAP KG+ T V+G N D KP+ IIS ASCTTN +
Sbjct: 97 TGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSI 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXX 175
AP VKVL +KFGI+ G +TT HSYT DQ NI+PT+T
Sbjct: 157 APIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVA 216
Query: 176 XXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCD 235
+G+A+RVPTP+ K+T EEVNA +E+ + LKGI+ D
Sbjct: 217 LVVPEVKGKLDGMAIRVPTPDGSITDLTVLVEKETTVEEVNAVMKEATEGRLKGIIGYND 276
Query: 236 EPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
EP+VS D +G +VKV +WYDNE+GYS RVVD +++
Sbjct: 277 EPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNEYGYSNRVVDTLELL 329
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 124/227 (54%), Gaps = 1/227 (0%)
Query: 55 GTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTN 113
TG F +E A H++AGAKKV++TAPGK + T VVGVN D +ISNASCTTN
Sbjct: 98 ATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTN 157
Query: 114 CLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXX 173
CLAP VKVLD++FGI G MTT H+YT DQ +I+PT+T
Sbjct: 158 CLAPVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKA 217
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSV 233
+G+ALRVPTPN + E +N AF+ A+ LKGI+
Sbjct: 218 LAKVLPHLNGKLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEF 277
Query: 234 CDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQR 280
+EPLVS+DF MGD VKV+AWYDNEWGYS+R
Sbjct: 278 SEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGYSRR 324
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 124/230 (53%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F R+ A H++AGAK+V+++AP G T V GVN D D +ISNASCTTNCL
Sbjct: 99 TGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXX 175
AP +VL+ GI KG MTT HSYTGDQ +++PTST
Sbjct: 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVG 218
Query: 176 XXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCD 235
+G+A+RVPTPN ++T EEVN A RE+A+ LKGIL D
Sbjct: 219 LVLPELKGKLDGVAIRVPTPNVSVVDLTFIAKRETTVEEVNNAIREAANGRLKGILGYTD 278
Query: 236 EPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 285
E LVS DF M MV++++WYDNEWG+S R+ D A
Sbjct: 279 EKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDNEWGFSSRMSDTA 328
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TGVF D + A H++ GAKKV+ITAP KG+ T V+GVN +AY P IISNASCTTN
Sbjct: 94 TGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNS 153
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAP +KVL++ FG+ K MTT HSYT DQ NI+PT+T
Sbjct: 154 LAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKAT 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
+G+ALRVPT ++ AEEVNAA + +A+ LKGIL+
Sbjct: 214 ALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
++ +V D +G +MVKV AWYDNEWGY+ RV DL ++V
Sbjct: 274 EDEIVLQDIVMDPHSSIVDAKLTKALG-NMVKVFAWYDNEWGYANRVADLVELV 326
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNC 114
TGVF D E A H++AGAKKV+ITAP K + T V+GVN + Y P I+SNASCTTN
Sbjct: 94 TGVFTDGEKARAHLEAGAKKVIITAPAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNS 153
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAP +KVL++ FG+ K MTT HSYT DQ NI+PT+T
Sbjct: 154 LAPVMKVLEKAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAALNIIPTTTGAAKAT 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
+G+ALRVPTP ++ AEEVNAA + +A+ LKGIL+
Sbjct: 214 ALVLPSLKGRFDGMALRVPTPTGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
++ +V D +G ++VKV AWYDNEWGY+ RV DL ++V
Sbjct: 274 EDEIVLRDIVMDPHSSIVDGKLTKAIG-NLVKVFAWYDNEWGYANRVADLVELV 326
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 132/262 (50%), Gaps = 20/262 (7%)
Query: 42 RLFLTATPSISPGG----------TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVV 91
++F PS P G TGVF DRE A KH+Q GAKKV+ITAP K T V+
Sbjct: 73 KVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVL 132
Query: 92 GVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXX 150
GVN + Y P E IISNASCTTNCLAP VKVL++ FG+ KG M T H+YT DQ
Sbjct: 133 GVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH 192
Query: 151 XXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKK- 209
NIVPT+T +G A RVP P+ +K
Sbjct: 193 KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAP 252
Query: 210 TFAEEVNAAFRESADN-------ELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGD 262
+ EEVN FRE+A LK IL C++P+VS D + D
Sbjct: 253 SSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-D 311
Query: 263 DMVKVIAWYDNEWGYSQRVVDL 284
++V + AWYDNEWGYS R+ DL
Sbjct: 312 NLVHIAAWYDNEWGYSCRLRDL 333
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 117/230 (50%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F R+ A H+ AGAK+VL++AP +G T V GVN + +ISNASCTTNCL
Sbjct: 120 TGIFTARDKASAHLDAGAKRVLVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCL 179
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXX 175
AP +VL GI KG MTT HSYTGDQ +++PTST
Sbjct: 180 APVAQVLHNTVGIEKGFMTTIHSYTGDQPVLDTMHRDLYRARAAALSMIPTSTGAAKAVG 239
Query: 176 XXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCD 235
+G+++RVPTPN + T EE+N A R +A LKGIL D
Sbjct: 240 LVLPELKGLLDGVSIRVPTPNVSVVDLTFTAKRSTTIEEINTAIRTAAQGSLKGILDYTD 299
Query: 236 EPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 285
E LVS DF + + +V+ WYDNEWG+S R+ D A
Sbjct: 300 EKLVSCDFNHNPHSAIFHNDQTKVIDGQLCRVLVWYDNEWGFSNRMCDTA 349
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNC 114
TGVF D + A H++ GAKKV+ITAP KG+ T V+GVN +AY P IISNAS TTN
Sbjct: 94 TGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASXTTNS 153
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAP +KVL++ FG+ K MTT HSYT DQ NI+PT+T
Sbjct: 154 LAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKAT 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
+G+ALRVPT ++ AEEVNAA + +A+ LKGIL+
Sbjct: 214 ALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
++ +V D +G +MVKV AWYDNEWGY+ RV DL ++V
Sbjct: 274 EDEIVLQDIVMDPHSSIVDAKLTKALG-NMVKVFAWYDNEWGYANRVADLVELV 326
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF D+E A H++ GAKKV+I+AP K D P +V GVN D Y D I+SNASCTTNCL
Sbjct: 101 TGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX-XXXXXXXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 160 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAV 219
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G++ RVPT + K + + +A + +++ +LKGI+
Sbjct: 220 GKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYV 279
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
+E LVS DF + D+ VK++AWYDNEWGYS RV+DL
Sbjct: 280 EEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF D+E A H++ GAKKV+I+AP K D P +V GVN D Y D I+SNASCTTNCL
Sbjct: 100 TGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 158
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX-XXXXXXXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 159 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAV 218
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G++ RVPT + K + + +A + +++ +LKGI+
Sbjct: 219 GKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYV 278
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
+E LVS DF + D+ VK++AWYDNEWGYS RV+DL
Sbjct: 279 EEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 328
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/236 (40%), Positives = 123/236 (52%), Gaps = 2/236 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNC 114
TG F +E A H++ GAKKV+I+APG D+ T V GVN D K + +ISNASCTTNC
Sbjct: 108 TGFFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHDVLKAEHTVISNASCTTNC 167
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAP VK L+ K G+ G MTT H+YT DQ + +PT T
Sbjct: 168 LAPLVKPLNDKIGLETGLMTTIHAYTNDQVLTDVYHEDLRRARSATHSQIPTKTGAAAAV 227
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
+G A+RVPT N + T A EVNA +E+++ LKGIL
Sbjct: 228 GLVLPELNGKLDGYAIRVPTINVSIVDLSFIAKRDTTAAEVNAIMKEASEGALKGILGYN 287
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+ PLVS+DF G +VKV +WYDNEWG+S R++D A +AN
Sbjct: 288 EAPLVSIDFNHNPASSTFDATLTKVSG-RLVKVSSWYDNEWGFSNRMLDTAIALAN 342
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TGVF E A H++ GAKKV+I+AP K ++P YV+GVN Y P + +ISNASCTTNC
Sbjct: 118 TGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 177
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXX 171
LAP K+++ KFGI++G MTT HS T +Q NI+P ST
Sbjct: 178 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAA 237
Query: 172 XXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGIL 231
G+A+RVPTP+ +K EE+ A +E+++ +KGI+
Sbjct: 238 KAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIM 297
Query: 232 SVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+ +VS DF + D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 298 GYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 356
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TGVF E A H++ GAKKV+I+AP K ++P YV+GVN Y P + +ISNASCTTNC
Sbjct: 113 TGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNC 172
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXX 171
LAP K+++ KFGI++G MTT HS T +Q NI+P ST
Sbjct: 173 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAA 232
Query: 172 XXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGIL 231
G+A+RVPTP+ +K EE+ A +E+++ +KGI+
Sbjct: 233 KAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIM 292
Query: 232 SVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+ +VS DF + D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 293 GYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 351
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 132/270 (48%), Gaps = 13/270 (4%)
Query: 35 LLMARSSRLFLTATPSISPGG----------TGVFVDREGAGKHIQAGAKKVLITAPGKG 84
L+ + +F PS P G TGVF+ +E A H++ GAKKV+++AP K
Sbjct: 68 LIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD 127
Query: 85 DIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQX 144
D P YV+G+N Y + I+SNASCTTNCLAP KV++ +FGI++G MTT H+ T +Q
Sbjct: 128 DTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQL 187
Query: 145 XX---XXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXX 201
NI+P ST G+A RVP
Sbjct: 188 VVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVD 247
Query: 202 XXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMG 261
K EEV +++A+ LKGIL ++ +VS DF +
Sbjct: 248 LVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALN 307
Query: 262 DDMVKVIAWYDNEWGYSQRVVDLADIVANN 291
D+ K+++WYDNEWGYS RV+DLA + NN
Sbjct: 308 DNFFKLVSWYDNEWGYSNRVLDLAVHITNN 337
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 118/229 (51%), Gaps = 2/229 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNC 114
TG F +E AG HI+ GAKKV+I+APG D+ T V GVN K + +ISNAS TTNC
Sbjct: 99 TGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASXTTNC 158
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
LAP VK L+ K G+ G MTT H+YT +Q +++PT T
Sbjct: 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAV 218
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
NG A+RVPT N + T EEVN + +++ ELKGIL
Sbjct: 219 GDVLPELDGKLNGYAIRVPTINVSIVDLSFVAKRNTTVEEVNGILKAASEGELKGILDYN 278
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 283
EPLVSVD+ G +VKV +WYDNEWG+S R++D
Sbjct: 279 TEPLVSVDYNHDPASSTVDASLTKVSG-RLVKVSSWYDNEWGFSNRMLD 326
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ E A KHI AGAKKV++T P K + P +V G N D Y + I+SNASCTTNCL
Sbjct: 97 TGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCL 155
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV++ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 156 APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K E++ AA + +A+ E+KG+L
Sbjct: 216 GKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYT 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYDNE GYS +V+DL
Sbjct: 276 EDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 325
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ E A KHI AGAKKV++T P K + P +V G N D Y + I+SNASCTTNCL
Sbjct: 96 TGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCL 154
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV++ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 155 APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAV 214
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K E++ AA + +A+ E+KG+L
Sbjct: 215 GKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYT 274
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYDNE GYS +V+DL
Sbjct: 275 EDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 324
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 129/264 (48%), Gaps = 13/264 (4%)
Query: 35 LLMARSSRLFLTATPSISPGG----------TGVFVDREGAGKHIQAGAKKVLITAPGKG 84
L+ + +F PS P G TGVF+ +E A H++ GAKKV+++AP K
Sbjct: 76 LIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD 135
Query: 85 DIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQX 144
D P YV+G+N Y + I+SNASCTTNCLAP KV++ +FGI++G MTT H+ T +Q
Sbjct: 136 DTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQL 195
Query: 145 XX---XXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXX 201
NI+P ST G+A RVP
Sbjct: 196 VVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVD 255
Query: 202 XXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMG 261
K EEV +++A+ LKGIL ++ +VS DF +
Sbjct: 256 LVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALN 315
Query: 262 DDMVKVIAWYDNEWGYSQRVVDLA 285
D+ K+++WYDNEWGYS RV+DLA
Sbjct: 316 DNFFKLVSWYDNEWGYSNRVLDLA 339
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TGVF E A H++ GAKKV+I+AP K ++P YV+GVN Y P + +ISNAS TTNC
Sbjct: 118 TGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASSTTNC 177
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXX---XXXXXXXNIVPTSTXXX 171
LAP K+++ KFGI++G MTT HS T +Q NI+P ST
Sbjct: 178 LAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAA 237
Query: 172 XXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGIL 231
G+A+RVPTP+ +K EE+ A +E+++ +KGI+
Sbjct: 238 KAVGKVIPALNGKLTGMAIRVPTPDVSVVDLTCKLAKPASIEEIYQAVKEASNGPMKGIM 297
Query: 232 SVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 290
+ +VS DF + D VK+I+WYDNE GYS R+VDLA VA+
Sbjct: 298 GYTSDDVVSTDFIGCKYSSILDKNACIALNDSFVKLISWYDNESGYSNRLVDLAVYVAS 356
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 120/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ E A KHI AGAKKV++T P K + P +V G N D Y + I+SNASCTTNCL
Sbjct: 96 TGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCL 154
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV++ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 155 APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAV 214
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K E++ AA + +A+ E+KG+L
Sbjct: 215 GKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYT 274
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYD E GYS +V+DL
Sbjct: 275 EDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDTETGYSNKVLDL 324
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 122/237 (51%), Gaps = 7/237 (2%)
Query: 56 TGVFV----DREGAGKHI-QAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 110
TGVF D+ G H+ AGAKKV++T P K +I T V+GVN D +SNASC
Sbjct: 115 TGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASC 174
Query: 111 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXX 170
TTNCLAP KVL + FGI +G MTT H+YT DQ +I+PTST
Sbjct: 175 TTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGA 234
Query: 171 XXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADN-ELK 228
NG ++RVP P KK EE+N+ R++++ ELK
Sbjct: 235 AKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLRKASETPELK 294
Query: 229 GILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 285
GIL ++P+VS D + + + K+++WYDNE+GYS RVVDLA
Sbjct: 295 GILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFAKILSWYDNEFGYSTRVVDLA 351
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ E A KHI AGAKKV++T P K + P +V G N D Y + I+SNAS TTNCL
Sbjct: 97 TGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQDIVSNASXTTNCL 155
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV++ FGII+G MTT H+ T Q NI+P+ST
Sbjct: 156 APLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAV 215
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K E++ AA + +A+ E+KG+L
Sbjct: 216 GKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYT 275
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYDNE GYS +V+DL
Sbjct: 276 EDDVVSTDFNGEVXTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 325
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
Query: 51 ISPGGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 110
I+ TGVF + + A KHI AGAKKV+ITAP P +V+GVN + Y D I+SNASC
Sbjct: 100 IAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVMGVNEEKYTSDLKIVSNASC 158
Query: 111 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTX 169
TTNCLAP KV++ FGI +G MTT HS T Q NI+P+ST
Sbjct: 159 TTNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTG 218
Query: 170 XXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKG 229
G+A RVPT + +K+T +E+ + +A+ +LKG
Sbjct: 219 AAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKG 278
Query: 230 ILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 289
+L ++ +VS DF + VK+++WYDNE+GYS RVVDL + VA
Sbjct: 279 VLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 338
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
Query: 51 ISPGGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 110
I+ TGVF + + A KHI AGAKKV+ITAP P +V+GVN + Y D I+SNASC
Sbjct: 92 IAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVMGVNEEKYTSDLKIVSNASC 150
Query: 111 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTX 169
TTNCLAP KV++ FGI +G MTT HS T Q NI+P+ST
Sbjct: 151 TTNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTG 210
Query: 170 XXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKG 229
G+A RVPT + +K+T +E+ + +A+ +LKG
Sbjct: 211 AAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKG 270
Query: 230 ILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 289
+L ++ +VS DF + VK+++WYDNE+GYS RVVDL + VA
Sbjct: 271 VLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 330
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 115/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E AG H+Q GAK+V+I+AP D P +V+GVN + Y IISNASCTTNCL
Sbjct: 102 TGVFTTMEKAGAHLQGGAKRVIISAP-SADAPMFVMGVNHEKYDNSLKIISNASCTTNCL 160
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGI++G MTT H+ T Q NI+P ST
Sbjct: 161 APLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAV 220
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPT N K +++ +++++ LKGIL
Sbjct: 221 GKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYT 280
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
+ +VS DF + D VK+I+WYDNE+GYS RVVDL
Sbjct: 281 EHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 330
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 118/230 (51%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E A H + GAKKV+I+AP D P +V GVN + Y D ++SNASCTTNCL
Sbjct: 95 TGVFTTIEKASAHFKGGAKKVIISAP-SADAPMFVCGVNLEKYSKDMKVVSNASCTTNCL 153
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KVL + F I++G MTT H+ T Q NI+P+ST
Sbjct: 154 APVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAV 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K+ +++ AA + +++ L+G+L
Sbjct: 214 GKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + VKV++WYDNE+GYSQRV+DL
Sbjct: 274 EDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 115/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E AG H+Q GAK+V+I+AP D P +V+GVN + Y IISNASCTTNCL
Sbjct: 99 TGVFTTMEKAGAHLQGGAKRVIISAP-SADAPMFVMGVNHEKYDNSLKIISNASCTTNCL 157
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGI++G MTT H+ T Q NI+P ST
Sbjct: 158 APLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAV 217
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPT N K +++ +++++ LKGIL
Sbjct: 218 GKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYT 277
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
+ +VS DF + D VK+I+WYDNE+GYS RVVDL
Sbjct: 278 EHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 327
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 127/238 (53%), Gaps = 4/238 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ +E A H+ GAKKV+++AP K D P +V+GVN D YK + I+SNASCTTNCL
Sbjct: 119 TGIFLTKEKAQAHLTNGAKKVIMSAPPKDDTPMFVMGVNNDQYKSSDVIVSNASCTTNCL 178
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXX---XXXXXXXXXXXXXXXNIVPTSTXXXX 172
AP K++ KFGI++G MTT H+ T +Q NI+P ST
Sbjct: 179 APLAKIVHDKFGIVEGLMTTVHAMTANQLTVDGPSKGGKDWRAGRSAGVNIIPASTGAAK 238
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESA-DNELKGIL 231
G+A RVP P+ +K E++ AA +E+A +KGI+
Sbjct: 239 AVGKIIPSLNGKLTGMAFRVPVPDVSVVDLTCKLAKPAKYEDIVAAVKEAATSGPMKGII 298
Query: 232 SVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 289
S DE +VS DF + D VK+++WYDNEWGYS R+V+LA ++
Sbjct: 299 SYTDEEVVSSDFVHCKFSSVFDINAGIMLNDTFVKLVSWYDNEWGYSNRLVELAHYMS 356
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 118/230 (51%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E A H + GAKKV+I+AP D P +V GVN + Y D ++SNASCTTNCL
Sbjct: 95 TGVFTTIEKASAHFKGGAKKVIISAP-SADAPMFVCGVNLEKYSKDMKVVSNASCTTNCL 153
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KVL + F I++G MTT H+ T Q NI+P+ST
Sbjct: 154 APVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAV 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K+ +++ AA + +++ L+G+L
Sbjct: 214 GKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGVLGYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + VKV++WYDNE+GYSQRV+DL
Sbjct: 274 EDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TG+F + A H++ GA+KV+I+AP G T V+GVN Y P E ++SNASCTTNC
Sbjct: 111 TGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNC 170
Query: 115 LAPFVKVL-DQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXX 172
LAP V VL + FG+ G MTT HSYT Q NI+P++T
Sbjct: 171 LAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAK 230
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILS 232
G++ RVPTP+ ++ T +E++AA + ++ +KGIL
Sbjct: 231 AVGMVIPSTQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILG 290
Query: 233 VCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
DE LVS DF R K+++WYDNEWGYS RVVDL +
Sbjct: 291 YTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHM 350
Query: 289 AN 290
A+
Sbjct: 351 AS 352
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 119/241 (49%), Gaps = 7/241 (2%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNC 114
TG+F D+ A HI+ GAKKV+I+AP G T V+GVN Y P ++SNASCTTNC
Sbjct: 111 TGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNC 170
Query: 115 LAPFVKVL-DQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXX 172
LAP V VL + FGI G MTT HSYT Q NI+P++T
Sbjct: 171 LAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAK 230
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILS 232
G++ RVPTP+ ++ T +E++ A +++A +KGIL
Sbjct: 231 AVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILG 290
Query: 233 VCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
DE LVS DF R KV++WYDNEW YS RVVDL +
Sbjct: 291 FTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYM 350
Query: 289 A 289
A
Sbjct: 351 A 351
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 119/241 (49%), Gaps = 7/241 (2%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNC 114
TG+F D+ A HI+ GAKKV+I+AP G T V+GVN Y P ++SNASCTTNC
Sbjct: 111 TGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNC 170
Query: 115 LAPFVKVL-DQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXX 172
LAP V VL + FGI G MTT HSYT Q NI+P++T
Sbjct: 171 LAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAK 230
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILS 232
G++ RVPTP+ ++ T +E++ A +++A +KGIL
Sbjct: 231 AVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILG 290
Query: 233 VCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
DE LVS DF R KV++WYDNEW YS RVVDL +
Sbjct: 291 FTDEELVSADFINDNRSSVYDSKATLQNNLPGEKRFFKVVSWYDNEWAYSHRVVDLVRYM 350
Query: 289 A 289
A
Sbjct: 351 A 351
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 125/240 (52%), Gaps = 3/240 (1%)
Query: 51 ISPGGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASC 110
I+ TGVF + + A KHI AGAKKV+ITAP K P +VVGVN D Y E I+SNASC
Sbjct: 105 IAVDSTGVFKELDSAQKHIDAGAKKVVITAPSK-TAPMFVVGVNEDKYN-GEKIVSNASC 162
Query: 111 TTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTX 169
TTNCLAP K+++ +FGI +G MTT HS T Q NI+P+ST
Sbjct: 163 TTNCLAPIAKIINDEFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTG 222
Query: 170 XXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKG 229
G+A RVPT + K +E+ AA ++ ++ +LK
Sbjct: 223 AAKAVGKVLPELQGKLTGMAFRVPTTDVSVVDLTVKLVKAATYDEIKAAVKKVSEGKLKD 282
Query: 230 ILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 289
++ ++ +VS DF + VK++AWYDNE+GYS RVVDL + VA
Sbjct: 283 VVGYTEDAVVSSDFLGDTHSTIFDAAAGIQLSPKFVKLVAWYDNEYGYSTRVVDLVEHVA 342
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E AG H++ GAK+V+I+AP D P +V+GVN + Y I+SNAS TTNCL
Sbjct: 96 TGVFTTMEKAGAHLKGGAKRVIISAP-SADAPMFVMGVNHEKYDNSLKIVSNASXTTNCL 154
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGI++G MTT H+ T Q NI+P ST
Sbjct: 155 APLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAV 214
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K +++ +++++ LKGIL
Sbjct: 215 GKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYT 274
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D VK+I+WYDNE+GYS RVVDL
Sbjct: 275 EDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDL 324
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TGV++ + A HI AGA++V+I+AP D P +V+GVN + Y P I+SNASCTTNC
Sbjct: 102 TGVYLSIQAASDHISAGAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNC 160
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXX 173
LAP KV+ ++FGI++G MTT HSYT Q NI+P ST
Sbjct: 161 LAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKA 220
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSV 233
G+A RVPTP+ ++ + A + +A + GIL+
Sbjct: 221 VTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAY 280
Query: 234 CDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL
Sbjct: 281 TEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDL 331
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 118/236 (50%), Gaps = 7/236 (2%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNC 114
TG+F + A H++ GA+KV+I+AP G T+V+GVN + Y P E ++SNASCTTNC
Sbjct: 111 TGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVSNASCTTNC 170
Query: 115 LAPFVKVL-DQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXX 172
LAP V VL + FGI G MTT HSYT Q NI+P++T
Sbjct: 171 LAPLVHVLVKEGFGISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAK 230
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILS 232
G+A RVPT + ++ T +E++AA + ++ +K IL
Sbjct: 231 AVGMVIPSTQGKLTGMAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILG 290
Query: 233 VCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
DE LVS DF R K+++WYDNEWGYS RVVDL
Sbjct: 291 YTDEELVSADFISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDL 346
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E A H + GAKKV+I+AP D P +V GVN + Y D ++SNASCTTNCL
Sbjct: 96 TGVFTTIEKASAHFKGGAKKVVISAP-SADAPMFVCGVNLEKYSKDMTVVSNASCTTNCL 154
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KVL + F I++G MTT H+ T Q NI+P+ST
Sbjct: 155 APVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAV 214
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTP+ K+ +++ AA + +++ L+G L
Sbjct: 215 GKVIPELDGKLTGMAFRVPTPDVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYT 274
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + VKV++WYDNE+GYSQRV+DL
Sbjct: 275 EDDVVSSDFIGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDL 324
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E A H + GAKKV+I+AP D P +V GVN + Y D ++SNASCTTNCL
Sbjct: 95 TGVFTTIEKASAHFKGGAKKVVISAP-SADAPMFVCGVNLEKYSKDMTVVSNASCTTNCL 153
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KVL + F I++G MTT H+ T Q NI+P+ST
Sbjct: 154 APVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAV 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTP+ K+ +++ AA + +++ L+G L
Sbjct: 214 GKVIPELDGKLTGMAFRVPTPDVSVVDLTVRLGKECSYDDIKAAMKTASEGPLQGFLGYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + VKV++WYDNE+GYSQRV+DL
Sbjct: 274 EDDVVSSDFIGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E A H + GAKKV+I+AP D P +V GVN + Y D ++SNAS TTNCL
Sbjct: 95 TGVFTTIEKASAHFKGGAKKVIISAP-SADAPMFVCGVNLEKYSKDMKVVSNASXTTNCL 153
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KVL + F I++G MTT H+ T Q NI+P+ST
Sbjct: 154 APVAKVLHENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAV 213
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPTPN K+ +++ AA + +++ L+G+L
Sbjct: 214 GKVIPELDGKLTGMAFRVPTPNVSVVDLTVRLGKECSYDDIKAAMKAASEGPLQGVLGYT 273
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + VKV++WYDNE+GYSQRV+DL
Sbjct: 274 EDDVVSCDFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDL 323
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 120/242 (49%), Gaps = 7/242 (2%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TG+F + A H++ GA+KV+I+AP G T V+GVN Y P E ++SNAS TTNC
Sbjct: 111 TGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASXTTNC 170
Query: 115 LAPFVKVL-DQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXX 172
LAP V VL + FG+ G MTT HSYT Q NI+P++T
Sbjct: 171 LAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAK 230
Query: 173 XXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILS 232
G++ RVPTP+ ++ T +E++AA + ++ +KGIL
Sbjct: 231 AVGMVIPSTQGKLTGMSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILG 290
Query: 233 VCDEPLVSVDF----RCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIV 288
DE LVS DF R K+++WYDNEWGYS RVVDL +
Sbjct: 291 YTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHM 350
Query: 289 AN 290
A+
Sbjct: 351 AS 352
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TGVF E AG H++ GAK+++I+AP D P +V+GVN Y IISNASCTTNCL
Sbjct: 98 TGVFTTMEKAGAHLKGGAKRIVISAP-SADAPMFVMGVNHFKYANSLKIISNASCTTNCL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV+ FGI++G MTT H+ T Q N++P ST
Sbjct: 157 APLAKVIHDHFGIVEGLMTTVHAITATQKTVDSPSGKLWRGGRGAAQNLIPASTGAAKAV 216
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G+A RVPT N K +++ +E+++ LKGIL
Sbjct: 217 GKVIPELDGKLTGMAFRVPTANVSVLDLTCRLEKPAKYDDIKKVVKEASEGPLKGILGYT 276
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D VK+++WYDNE+GYS+RVVDL
Sbjct: 277 EDEVVSDDFNGSNHSSIFDAGAGIELNDTFVKLVSWYDNEFGYSERVVDL 326
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNC 114
TGV++ E A HI +GA++V++TAP D P V+GVN Y P ++SNAS TTNC
Sbjct: 96 TGVYLSIEAASGHISSGARRVIVTAPSP-DAPMLVMGVNEKDYNPGSMTVVSNASXTTNC 154
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXX 173
LAP KV+ ++FGI++G MTT H+YT Q NI+P+ST
Sbjct: 155 LAPLAKVIHERFGIVEGLMTTVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKA 214
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSV 233
G+A RVPTPN ++ + A + +A + GIL+
Sbjct: 215 VGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAY 274
Query: 234 CDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYDNE+GYS RVVDL
Sbjct: 275 TEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYDNEYGYSHRVVDL 325
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG+F+ E A KHI AGAKKV+ T P K + P +V G N D Y + I+SNASCTTNCL
Sbjct: 96 TGLFLTDETARKHITAGAKKVVXTGPSKDNTPXFVKGANFDKY-AGQDIVSNASCTTNCL 154
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXX-XXXXXXXXNIVPTSTXXXXXX 174
AP KV++ FGII+G TT H+ T Q NI+P+ST
Sbjct: 155 APLAKVINDNFGIIEGLXTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAV 214
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
G A RVPTPN K E++ AA + +A+ E KG+L
Sbjct: 215 GKVLPELNGKLTGXAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEXKGVLGYT 274
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 284
++ +VS DF + D+ VK+++WYDNE GYS +V+DL
Sbjct: 275 EDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 324
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNC 114
TGV+ RE HI AGAKKVL + PG D+ T V GVN D + + I+SNASCTTNC
Sbjct: 99 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNC 158
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
+ P +K+LD +GI GT+TT HS DQ +I+P T
Sbjct: 159 IIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGI 218
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
IA+RVPT N K A EVN +++A GI+
Sbjct: 219 TRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYT 278
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 283
+ PLVSVDF G ++K + W DNEWG++ R++D
Sbjct: 279 ELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 327
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNC 114
TGV+ RE HI AGAKKVL + PG D+ T V GVN D + + I+SNASCTTNC
Sbjct: 100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNC 159
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
+ P +K+LD +GI GT+TT HS DQ +I+P T
Sbjct: 160 IIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGI 219
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
IA+RVPT N K A EVN +++A GI+
Sbjct: 220 TRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYT 279
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 283
+ PLVSVDF G ++K + W DNEWG++ R++D
Sbjct: 280 ELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNC 114
TGV+ RE HI AGAKKVL + PG D+ T V GVN D + + I+SNAS TTN
Sbjct: 100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASATTNS 159
Query: 115 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXX 174
+ P +K+LD +GI GT+TT HS DQ +I+P T
Sbjct: 160 IIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGI 219
Query: 175 XXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVC 234
IA+RVPT N K A EVN +++A GI+
Sbjct: 220 TRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYT 279
Query: 235 DEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 283
+ PLVSVDF G ++K + W DNEWG++ R++D
Sbjct: 280 ELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S ASCTTN L
Sbjct: 100 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 159
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 160 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 219
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 220 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 276
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 277 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 328
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S ASCTTN L
Sbjct: 97 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 157 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 216
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 217 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 273
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 274 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S ASCTTN L
Sbjct: 105 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 164
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 165 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 224
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 225 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 281
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 282 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 333
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S ASCTTN L
Sbjct: 99 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 158
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 159 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 218
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 219 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 275
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 276 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 327
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S ASCTTN L
Sbjct: 97 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT ++YTGDQ NI+P ST
Sbjct: 157 APVAKVLNDDFGLVEGLMTTINAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 216
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 217 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 273
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 274 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S AS TTN L
Sbjct: 97 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 157 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 216
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 217 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 273
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 274 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S AS TTN L
Sbjct: 97 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASGTTNSL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT H+YTGDQ NI+P ST
Sbjct: 157 APVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 216
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 217 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 273
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 274 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 56 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 115
TG + D++ A HI+AGAKKVLI+AP GD+ T V N E ++S AS TTN L
Sbjct: 97 TGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASSTTNSL 156
Query: 116 APFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXX--XXXXXXXXXXXXXNIVPTSTXXXXX 173
AP KVL+ FG+++G MTT ++YTGDQ NI+P ST
Sbjct: 157 APVAKVLNDDFGLVEGLMTTINAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKA 216
Query: 174 XXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADNELKGILS 232
+G A RVP K+ E+VN A + +A NE G
Sbjct: 217 IGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMK-NASNESFGY-- 273
Query: 233 VCDEPLVSVDFRCXXXXXXXXXXXXXXM--GD-DMVKVIAWYDNEWGYSQRVV 282
++ +VS D M GD +VKV AWYDNE Y+ ++V
Sbjct: 274 -TEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLV 325
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 85 DIPTYVVGVN--ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 141
D+P V VN DA++ + II+N +CTT P +KVL + +++ +++ + +G
Sbjct: 102 DVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSG 160
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 85 DIPTYVVGVN--ADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 141
D+P V VN DA++ + II+N +CTT P +KVL + +++ +++ + +G
Sbjct: 120 DVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSG 178
>pdb|1YS4|A Chain A, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
pdb|1YS4|B Chain B, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
Length = 354
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 85 DIPTYVVGVNADAYKP----------DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMT 134
D+P + VNAD + D II+N +C+T C +K + KFG+ +
Sbjct: 122 DVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCSTICAVITLKPIXDKFGLEAVFIA 181
Query: 135 TTHSYTG 141
T + +G
Sbjct: 182 TXQAVSG 188
>pdb|2GYY|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|C Chain C, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|D Chain D, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GZ1|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (asadh)
From Streptococcus Pneumoniae Complexed With Nadp
pdb|2GZ1|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (asadh)
From Streptococcus Pneumoniae Complexed With Nadp
pdb|2GZ2|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With 2',5'-Adp
pdb|2GZ2|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With 2',5'-Adp
pdb|2GZ3|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|C Chain C, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|D Chain D, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|3PWK|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWK|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWS|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWS|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PYL|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|C Chain C, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|D Chain D, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYX|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And 2-Aminoterephthalate
pdb|3PYX|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And 2-Aminoterephthalate
pdb|3PZB|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And
D-2,3-Diaminopropionate
pdb|3PZB|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And
D-2,3-Diaminopropionate
pdb|3Q11|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With Nadp
And Aspartyl Beta- Difluorophosphonate
pdb|3Q11|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With Nadp
And Aspartyl Beta- Difluorophosphonate
pdb|3Q1L|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|C Chain C, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|D Chain D, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
Length = 366
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 85 DIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTG 141
D+P V VNA A II+ +C+T + ++ + QK+G+ + ++T + +G
Sbjct: 103 DVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSG 159
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,518,468
Number of Sequences: 62578
Number of extensions: 221237
Number of successful extensions: 679
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 72
length of query: 293
length of database: 14,973,337
effective HSP length: 98
effective length of query: 195
effective length of database: 8,840,693
effective search space: 1723935135
effective search space used: 1723935135
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)