AmiGO: BLAST Results


BLAST match view associations BLAST with AT1G15140 AT1G15140 AT1G15140	protein from Arabidopsis thaliana	4.5e-98
BLAST match view associations BLAST with CHY_0934 CHY_0934 CHY_0934 hydrogenase, gamma subunit	protein from Carboxydothermus hydrogenoformans Z-2901	2.0e-11
BLAST match view associations BLAST with GSU_0085 GSU_0085 GSU_0085 heterodisulfide reductase, cytochrome reductase subunit	protein from Geobacter sulfurreducens PCA	1.4e-09
BLAST match view associations BLAST with SPO_A0033 SPO_A0033 SPO_A0033 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit	protein from Ruegeria pomeroyi DSS-3	1.8e-07
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Shewanella oneidensis MR-1	2.4e-07
BLAST match view associations BLAST with SO_0907 SO_0907 SO_0907 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Shewanella oneidensis MR-1	2.4e-07
BLAST match view associations BLAST with FNR1 FNR1 FNR1 AT5G66190	protein from Arabidopsis thaliana	3.2e-07
BLAST match view associations BLAST with FNR2 FNR2 FNR2 AT1G20020	protein from Arabidopsis thaliana	4.5e-07
BLAST match view associations BLAST with CPS_1085 CPS_1085 CPS_1085 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit	protein from Colwellia psychrerythraea 34H	5.4e-07
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Shewanella oneidensis MR-1	5.7e-07
BLAST match view associations BLAST with SO_1108 SO_1108 SO_1108 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Shewanella oneidensis MR-1	5.7e-07
BLAST match view associations BLAST with PETH PETH PETH Ferredoxin--NADP reductase, leaf isozyme, chloroplastic	protein from Pisum sativum	1.2e-06
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.7e-06
BLAST match view associations BLAST with VC_2290 VC_2290 VC_2290 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Vibrio cholerae O1 biovar El Tor	2.7e-06
BLAST match view associations BLAST with dmpP dmpP dmpP Phenol hydroxylase P5 protein	protein from Pseudomonas sp. CF600	4.5e-06
BLAST match view associations BLAST with PETH PETH PETH Ferredoxin--NADP reductase, chloroplastic	protein from Spinacia oleracea	8.4e-06
BLAST match view associations BLAST with mphP mphP mphP Phenol hydroxylase P5 protein	protein from Acinetobacter calcoaceticus PHEA-2	2.2e-05
BLAST match view associations BLAST with antC antC antC Anthranilate dioxygenase reductase	protein from Pseudomonas protegens Pf-5	3.5e-05
BLAST match view associations BLAST with VC_A0924 VC_A0924 VC_A0924 Putative uncharacterized protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.5e-05
BLAST match view associations BLAST with VC_A0924 VC_A0924 VC_A0924 conserved hypothetical protein	protein from Vibrio cholerae O1 biovar El Tor	3.5e-05
BLAST match view associations BLAST with fre fre fre riboflavin reductase [NAD(P)H] / FMN reductase	protein from Escherichia coli K-12	5.4e-05
BLAST match view associations BLAST with SO_0504 SO_0504 SO_0504 NAD(P)H-flavin reductase	protein from Shewanella oneidensis MR-1	7.0e-05
BLAST match view associations BLAST with fpr_2 fpr_2 fpr_2 Ferredoxin--NADP(+) reductase	protein from Pseudomonas protegens Pf-5	9.5e-05
BLAST match view associations BLAST with VC_0312 VC_0312 VC_0312 NAD(P)H-flavin reductase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.6e-05
BLAST match view associations BLAST with VC_0312 VC_0312 VC_0312 NAD(P)H-flavin reductase	protein from Vibrio cholerae O1 biovar El Tor	9.6e-05

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022710
        (293 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037708 - symbol:AT1G15140 species:3702 "Arabi...   974  4.5e-98   1
TIGR_CMR|CHY_0934 - symbol:CHY_0934 "hydrogenase, gamma s...   172  2.0e-11   1
TIGR_CMR|GSU_0085 - symbol:GSU_0085 "heterodisulfide redu...   158  1.4e-09   1
TIGR_CMR|SPO_A0033 - symbol:SPO_A0033 "NADH:ubiquinone ox...   144  1.8e-07   1
UNIPROTKB|Q8EID5 - symbol:nqrF "Na(+)-translocating NADH-...   143  2.4e-07   1
TIGR_CMR|SO_0907 - symbol:SO_0907 "NADH:ubiquinone oxidor...   143  2.4e-07   1
TAIR|locus:2156917 - symbol:FNR1 "AT5G66190" species:3702...   141  3.2e-07   1
TAIR|locus:2198651 - symbol:FNR2 "AT1G20020" species:3702...   140  4.5e-07   1
TIGR_CMR|CPS_1085 - symbol:CPS_1085 "NADH:ubiquinone oxid...   140  5.4e-07   1
UNIPROTKB|Q8EHV4 - symbol:nqrF "Na(+)-translocating NADH-...   140  5.7e-07   1
TIGR_CMR|SO_1108 - symbol:SO_1108 "NADH:ubiquinone oxidor...   140  5.7e-07   1
UNIPROTKB|P10933 - symbol:PETH "Ferredoxin--NADP reductas...   136  1.2e-06   1
UNIPROTKB|Q9X4Q8 - symbol:nqrF "Na(+)-translocating NADH-...   134  2.7e-06   1
TIGR_CMR|VC_2290 - symbol:VC_2290 "NADH:ubiquinone oxidor...   134  2.7e-06   1
UNIPROTKB|P19734 - symbol:dmpP "Phenol hydroxylase P5 pro...   131  4.5e-06   1
UNIPROTKB|P00455 - symbol:PETH "Ferredoxin--NADP reductas...   129  8.4e-06   1
UNIPROTKB|Q7WTJ2 - symbol:mphP "Phenol hydroxylase P5 pro...   125  2.2e-05   1
UNIPROTKB|Q4KIN9 - symbol:antC "Anthranilate dioxygenase ...   123  3.5e-05   1
UNIPROTKB|Q9KL25 - symbol:VC_A0924 "Putative uncharacteri...   127  3.5e-05   1
TIGR_CMR|VC_A0924 - symbol:VC_A0924 "conserved hypothetic...   127  3.5e-05   1
UNIPROTKB|P0AEN1 - symbol:fre "riboflavin reductase [NAD(...   118  5.4e-05   1
TIGR_CMR|SO_0504 - symbol:SO_0504 "NAD(P)H-flavin reducta...   117  7.0e-05   1
UNIPROTKB|Q4K5Q5 - symbol:fpr_2 "Ferredoxin--NADP(+) redu...   117  9.5e-05   1
UNIPROTKB|Q9KV46 - symbol:VC_0312 "NAD(P)H-flavin reducta...   116  9.6e-05   1
TIGR_CMR|VC_0312 - symbol:VC_0312 "NAD(P)H-flavin reducta...   116  9.6e-05   1


>TAIR|locus:2037708 [details] [associations]
            symbol:AT1G15140 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016491
            "oxidoreductase activity" evidence=IEA;ISS] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
            stroma" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
            [GO:0005507 "copper ion binding" evidence=IDA] InterPro:IPR001221
            InterPro:IPR001433 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00175 PRINTS:PR00410 PROSITE:PS51384 Pfam:PF00970
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0016491
            GO:GO:0009941 GO:GO:0005507 EMBL:AC007591 GO:GO:0009579
            eggNOG:COG0543 InterPro:IPR008333 SUPFAM:SSF63380 EMBL:AF344328
            EMBL:AY054626 EMBL:AY072475 IPI:IPI00525063 PIR:C86285
            RefSeq:NP_563963.1 UniGene:At.22546 ProteinModelPortal:Q9XI55
            STRING:Q9XI55 PaxDb:Q9XI55 PRIDE:Q9XI55 ProMEX:Q9XI55
            EnsemblPlants:AT1G15140.1 GeneID:838079 KEGG:ath:AT1G15140
            TAIR:At1g15140 HOGENOM:HOG000264529 InParanoid:Q9XI55 OMA:GAFEFLV
            PhylomeDB:Q9XI55 ProtClustDB:CLSN2687808 ArrayExpress:Q9XI55
            Genevestigator:Q9XI55 Uniprot:Q9XI55
        Length = 295

 Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
 Identities = 186/289 (64%), Positives = 223/289 (77%)

Query:     8 SPSLPHAHVSQTFPPMSILRRIPL---LHLKPQXXXXXXXXXXXXXQDTTVWTPTPLAEI 64
             +PS+ HAH S +  PM ILR +PL   L L                QD ++WTP PL+ I
Sbjct:     7 APSVTHAHFSHSLSPMFILRHLPLTRHLRLSRNNRVASVVSAAAVRQDASLWTPAPLSLI 66

Query:    65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXE 124
               AAESLFH+SIDIS+APD+ +S+TR GQYLQ+RV DV KP+F+AI             E
Sbjct:    67 ESAAESLFHISIDISNAPDLVASYTRPGQYLQIRVPDVEKPSFMAIASPPSLASSRGAFE 126

Query:   125 FLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
             FLVKS+AGSTAE+LCGLKKG+ VE+S VMG GF +D I PP+EYPTVLIFATGSGISPIR
Sbjct:   127 FLVKSIAGSTAEILCGLKKGETVELSSVMGNGFNIDLIDPPEEYPTVLIFATGSGISPIR 186

Query:   185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGY 244
             SLIESGF +  RSDVRLYYGARNL RMAYQ+KFKEWES+GVK+VPVLSQPD  W GETGY
Sbjct:   187 SLIESGFGADRRSDVRLYYGARNLNRMAYQEKFKEWESAGVKVVPVLSQPDDGWKGETGY 246

Query:   245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
             VQAAF+RAK++  P+ TG VLCGQKQMAEE+TS+++A+GVS++K+LKNF
Sbjct:   247 VQAAFARAKQLSAPKATGAVLCGQKQMAEEITSMLVADGVSNDKLLKNF 295


>TIGR_CMR|CHY_0934 [details] [associations]
            symbol:CHY_0934 "hydrogenase, gamma subunit"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0016491
            "oxidoreductase activity" evidence=ISS] InterPro:IPR001221
            InterPro:IPR001433 InterPro:IPR012165 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00175 PIRSF:PIRSF006816 PRINTS:PR00410
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0050660 EMBL:CP000141
            GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0051537
            eggNOG:COG0543 InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0006221
            Gene3D:2.10.240.10 InterPro:IPR019480 Pfam:PF10418
            RefSeq:YP_359781.1 ProteinModelPortal:Q3ADK3 STRING:Q3ADK3
            GeneID:3726276 KEGG:chy:CHY_0934 PATRIC:21275003
            HOGENOM:HOG000225119 OMA:FCIASAP ProtClustDB:CLSK941218
            BioCyc:CHYD246194:GJCN-933-MONOMER Uniprot:Q3ADK3
        Length = 280

 Score = 172 (65.6 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 53/206 (25%), Positives = 91/206 (44%)

Query:    90 RAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXEFLVKSVAGSTAEVLCGLKKGDVVEI 149
             + GQ  Q+ +  VG+ T ++I             EF +K V G    V+  ++ G  V I
Sbjct:    43 KPGQVAQISIFGVGEAT-ISITSSPTRTGML---EFSIKKV-GRLTSVIHQMEPGMKVGI 97

Query:   150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD---VRLYYGAR 206
                 G  F  + ++  D    +L    G G++P+RSLI+   + + R D   V + YGAR
Sbjct:    98 RGPYGNHFPYEMMKGKD----LLFIGGGIGLAPLRSLIDFVLAPENRKDYGKVEILYGAR 153

Query:   207 NLKRMAYQ-DKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
             +   + ++ D F  W +    K+   + +P+  W G  G+V A         NPQ    +
Sbjct:   154 SSADLCFKYDLFDNWPKQPDTKVYVTIDRPEEGWDGHVGFVPAYLEELNP--NPQNKVTI 211

Query:   265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
              CG   M + V   +   G S ++++
Sbjct:   212 TCGPPIMIKFVLQALEKMGYSEDQVV 237


>TIGR_CMR|GSU_0085 [details] [associations]
            symbol:GSU_0085 "heterodisulfide reductase, cytochrome
            reductase subunit" species:243231 "Geobacter sulfurreducens PCA"
            [GO:0015036 "disulfide oxidoreductase activity" evidence=ISS]
            InterPro:IPR001433 InterPro:IPR001709 InterPro:IPR001834
            InterPro:IPR012165 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00175 PIRSF:PIRSF006816 PRINTS:PR00371 PRINTS:PR00406
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0050660 GO:GO:0016491
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051537
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0006221 Gene3D:2.10.240.10
            InterPro:IPR019480 Pfam:PF10418 HOGENOM:HOG000225119 OMA:FCIASAP
            RefSeq:NP_951147.1 ProteinModelPortal:Q74H08 GeneID:2688328
            KEGG:gsu:GSU0085 PATRIC:22022914 ProtClustDB:CLSK813509
            BioCyc:GSUL243231:GH27-37-MONOMER Uniprot:Q74H08
        Length = 280

 Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 50/188 (26%), Positives = 81/188 (43%)

Query:    90 RAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXEFLVKSVAGSTAEVLCGLKKGDVVEI 149
             RAGQ+ +      G+ TF                E   ++V G   E L  L+ GD + +
Sbjct:    44 RAGQFAEYSAFGAGEATFCI----ASAPTRQGYIECCFRAV-GRVTEALRSLETGDTIGV 98

Query:   150 SQVMGRGFAVDRIQPPDEYPTVLIFATGS-GISPIRSLIESGFSSKER-SDVRLYYGARN 207
                 G  F V+       +   L+F  G   + P+R+LI      +E+  D+ + YGAR 
Sbjct:    99 RGPYGNSFPVEEF-----FGKNLVFVAGGIALPPLRTLIWQCLDWREKFGDITIVYGART 153

Query:   208 LKRMAYQDKFKEWES-SGVKIVPVLSQPDGN---WSGETGYVQAAFSRAKKIFNPQGTGV 263
                + Y+ + +EWE  S V++V  +  P GN   W G+ G+V     +A    +   T  
Sbjct:   154 EADLVYKRELREWEERSDVRLVKTVD-PGGNSPSWDGQVGFVPTVLEQAAPAAD--NTIA 210

Query:   264 VLCGQKQM 271
             ++CG   M
Sbjct:   211 LVCGPPVM 218


>TIGR_CMR|SPO_A0033 [details] [associations]
            symbol:SPO_A0033 "NADH:ubiquinone oxidoreductase,
            Na(+)-translocating, F subunit" species:246200 "Ruegeria pomeroyi
            DSS-3" [GO:0006814 "sodium ion transport" evidence=ISS] [GO:0016655
            "oxidoreductase activity, acting on NAD(P)H, quinone or similar
            compound as acceptor" evidence=ISS] HAMAP:MF_00430
            InterPro:IPR001041 InterPro:IPR001433 InterPro:IPR010205
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            PROSITE:PS51085 PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021
            GO:GO:0005886 GO:GO:0009055 GO:GO:0046872 GO:GO:0006814
            GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0016655 EMBL:CP000032
            GenomeReviews:CP000032_GR GO:GO:0009276 KO:K00351 OMA:ANYPEEK
            ProtClustDB:PRK05464 TIGRFAMs:TIGR01941 HOGENOM:HOG000263661
            RefSeq:YP_164864.1 ProteinModelPortal:Q5LLL7 SMR:Q5LLL7
            GeneID:3196865 KEGG:sil:SPOA0033 PATRIC:23381366 Uniprot:Q5LLL7
        Length = 406

 Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 49/167 (29%), Positives = 77/167 (46%)

Query:   131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
             AG  +  +  LK GD V IS   G  FA D     D+   ++    G+G++P+RS I   
Sbjct:   240 AGKMSSYIFNLKPGDEVTISGPFGEFFARDT----DK--EMVFIGGGAGMAPMRSHIFDQ 293

Query:   191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
                 K +  +  +YGAR+ K M + + F     E+   +    LS  QP+ +W G TG++
Sbjct:   294 LKRLKSKRKISFWYGARSKKEMFFVEDFDMLAAENPNFEWHVALSDAQPEDDWKGYTGFI 353

Query:   246 Q-AAFSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                 F    K    P+     +CG   M + V +++L  GV  E I+
Sbjct:   354 HNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIM 400


>UNIPROTKB|Q8EID5 [details] [associations]
            symbol:nqrF "Na(+)-translocating NADH-quinone reductase
            subunit F" species:211586 "Shewanella oneidensis MR-1" [GO:0006120
            "mitochondrial electron transport, NADH to ubiquinone"
            evidence=ISS] [GO:0006814 "sodium ion transport" evidence=ISS]
            [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
            evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041 InterPro:IPR001433
            InterPro:IPR001709 InterPro:IPR010205 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175 PRINTS:PR00371
            PROSITE:PS51085 PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021
            GO:GO:0005886 GO:GO:0009055 GO:GO:0046872 EMBL:AE014299
            GenomeReviews:AE014299_GR GO:GO:0008137 GO:GO:0006120 GO:GO:0006814
            GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
            HSSP:P00259 InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0009276
            KO:K00351 ProtClustDB:PRK05464 TIGRFAMs:TIGR01941
            HOGENOM:HOG000263661 RefSeq:NP_716537.1 ProteinModelPortal:Q8EID5
            SMR:Q8EID5 GeneID:1168753 KEGG:son:SO_0907 PATRIC:23521469
            OMA:PPIMNSS Uniprot:Q8EID5
        Length = 405

 Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 48/166 (28%), Positives = 74/166 (44%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD V IS   G  F  D      +   V I   G+G++P+RS I    
Sbjct:   240 GKMSSYIFNLKAGDKVTISGPFGEFFVKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 293

Query:   192 SSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
              SK+ +  +  +YGAR+ + + YQ  F    +     V    LS+P  + NW+G TG++ 
Sbjct:   294 KSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIH 353

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V  ++ + GV  E IL
Sbjct:   354 NVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENIL 399


>TIGR_CMR|SO_0907 [details] [associations]
            symbol:SO_0907 "NADH:ubiquinone oxidoreductase, Na
            translocating, beta subunit" species:211586 "Shewanella oneidensis
            MR-1" [GO:0006120 "mitochondrial electron transport, NADH to
            ubiquinone" evidence=ISS] [GO:0006814 "sodium ion transport"
            evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
            activity" evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041
            InterPro:IPR001433 InterPro:IPR001709 InterPro:IPR010205
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            PRINTS:PR00371 PROSITE:PS51085 PROSITE:PS51384 Pfam:PF00970
            GO:GO:0016021 GO:GO:0005886 GO:GO:0009055 GO:GO:0046872
            EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008137 GO:GO:0006120
            GO:GO:0006814 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
            SUPFAM:SSF54292 HSSP:P00259 InterPro:IPR008333 SUPFAM:SSF63380
            GO:GO:0009276 KO:K00351 ProtClustDB:PRK05464 TIGRFAMs:TIGR01941
            HOGENOM:HOG000263661 RefSeq:NP_716537.1 ProteinModelPortal:Q8EID5
            SMR:Q8EID5 GeneID:1168753 KEGG:son:SO_0907 PATRIC:23521469
            OMA:PPIMNSS Uniprot:Q8EID5
        Length = 405

 Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 48/166 (28%), Positives = 74/166 (44%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD V IS   G  F  D      +   V I   G+G++P+RS I    
Sbjct:   240 GKMSSYIFNLKAGDKVTISGPFGEFFVKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 293

Query:   192 SSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
              SK+ +  +  +YGAR+ + + YQ  F    +     V    LS+P  + NW+G TG++ 
Sbjct:   294 KSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIH 353

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V  ++ + GV  E IL
Sbjct:   354 NVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENIL 399


>TAIR|locus:2156917 [details] [associations]
            symbol:FNR1 "AT5G66190" species:3702 "Arabidopsis
            thaliana" [GO:0003959 "NADPH dehydrogenase activity" evidence=IDA]
            [GO:0004324 "ferredoxin-NADP+ reductase activity" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA;ISS] [GO:0050660 "flavin adenine
            dinucleotide binding" evidence=IEA] [GO:0050661 "NADP binding"
            evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA;IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
            [GO:0009579 "thylakoid" evidence=IDA] [GO:0009941 "chloroplast
            envelope" evidence=IDA] [GO:0042742 "defense response to bacterium"
            evidence=IEP;RCA] [GO:0045156 "electron transporter, transferring
            electrons within the cyclic electron transport pathway of
            photosynthesis activity" evidence=IDA] [GO:0045157 "electron
            transporter, transferring electrons within the noncyclic electron
            transport pathway of photosynthesis activity" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009767
            "photosynthetic electron transport chain" evidence=IMP] [GO:0048046
            "apoplast" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
            evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
            processing" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009409 "response to cold"
            evidence=RCA] [GO:0009595 "detection of biotic stimulus"
            evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
            [GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
            [GO:0009773 "photosynthetic electron transport in photosystem I"
            evidence=RCA] [GO:0009814 "defense response, incompatible
            interaction" evidence=RCA] [GO:0009862 "systemic acquired
            resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
            [GO:0010310 "regulation of hydrogen peroxide metabolic process"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0043085 "positive regulation of catalytic activity"
            evidence=RCA] [GO:0043900 "regulation of multi-organism process"
            evidence=RCA] [GO:0050832 "defense response to fungus"
            evidence=RCA] InterPro:IPR001433 InterPro:IPR001709
            InterPro:IPR012146 InterPro:IPR015701 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00175 PIRSF:PIRSF000361 PRINTS:PR00371
            PROSITE:PS51384 UniPathway:UPA00091 Pfam:PF00970 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0050660
            GO:GO:0048046 GO:GO:0050661 GO:GO:0042742 GO:GO:0009941
            GO:GO:0004324 InterPro:IPR008333 SUPFAM:SSF63380 EMBL:AB011474
            GO:GO:0009535 GO:GO:0031977 eggNOG:COG0369 GO:GO:0009767
            UniGene:At.47570 PANTHER:PTHR19384:SF1 EMBL:AJ243705 EMBL:AY072112
            EMBL:AY096665 EMBL:AK226411 IPI:IPI00541856 RefSeq:NP_201420.1
            UniGene:At.49233 HSSP:P10933 ProteinModelPortal:Q9FKW6 SMR:Q9FKW6
            IntAct:Q9FKW6 STRING:Q9FKW6 PaxDb:Q9FKW6 PRIDE:Q9FKW6
            EnsemblPlants:AT5G66190.1 GeneID:836751 KEGG:ath:AT5G66190
            TAIR:At5g66190 HOGENOM:HOG000220125 InParanoid:Q9FKW6 KO:K02641
            OMA:GRMYIQD PhylomeDB:Q9FKW6 ProtClustDB:PLN03115
            BioCyc:ARA:AT5G66190-MONOMER Genevestigator:Q9FKW6 GO:GO:0045156
            GO:GO:0045157 Uniprot:Q9FKW6
        Length = 360

 Score = 141 (54.7 bits), Expect = 3.2e-07, P = 3.2e-07
 Identities = 43/165 (26%), Positives = 79/165 (47%)

Query:   130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
             V G  +  LC LK GD  +I+  +G+    + + P D   T+++  TG+GI+P RS +  
Sbjct:   174 VKGVCSNFLCDLKPGDEAKITGPVGK----EMLMPKDPNATIIMLGTGTGIAPFRSFLWK 229

Query:   190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
              F  +E  D +      L+ G      + Y+++F   KE      ++   +S+   N  G
Sbjct:   230 MFF-EEHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKNPDNFRLDFAVSREQTNEKG 288

Query:   241 ETGYVQAAFSR-AKKIFN---PQGTGVVLCGQKQMAEEVTSIVLA 281
             E  Y+Q   +  A++++       T V +CG K M + +  I+++
Sbjct:   289 EKMYIQTRMAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVS 333


>TAIR|locus:2198651 [details] [associations]
            symbol:FNR2 "AT1G20020" species:3702 "Arabidopsis
            thaliana" [GO:0003959 "NADPH dehydrogenase activity" evidence=IDA]
            [GO:0004324 "ferredoxin-NADP+ reductase activity" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009535
            "chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA;ISS] [GO:0050660 "flavin adenine
            dinucleotide binding" evidence=IEA] [GO:0050661 "NADP binding"
            evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA;IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
            "defense response to bacterium" evidence=IEP;RCA] [GO:0008266
            "poly(U) RNA binding" evidence=IDA] [GO:0048046 "apoplast"
            evidence=IDA] [GO:0009817 "defense response to fungus, incompatible
            interaction" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0000165 "MAPK
            cascade" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009409 "response to cold" evidence=RCA] [GO:0009595 "detection
            of biotic stimulus" evidence=RCA] [GO:0009657 "plastid
            organization" evidence=RCA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009773 "photosynthetic
            electron transport in photosystem I" evidence=RCA] [GO:0009814
            "defense response, incompatible interaction" evidence=RCA]
            [GO:0009853 "photorespiration" evidence=RCA] [GO:0009862 "systemic
            acquired resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010310
            "regulation of hydrogen peroxide metabolic process" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            [GO:0043900 "regulation of multi-organism process" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA]
            InterPro:IPR001433 InterPro:IPR001709 InterPro:IPR012146
            InterPro:IPR015701 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00175 PIRSF:PIRSF000361 PRINTS:PR00371 PROSITE:PS51384
            UniPathway:UPA00091 Pfam:PF00970 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0050660
            GO:GO:0048046 GO:GO:0050661 GO:GO:0042742 GO:GO:0009817
            GO:GO:0022900 GO:GO:0004324 InterPro:IPR008333 SUPFAM:SSF63380
            GO:GO:0009535 GO:GO:0015979 EMBL:AC022472 eggNOG:COG0369
            PANTHER:PTHR19384:SF1 HOGENOM:HOG000220125 KO:K02641
            ProtClustDB:PLN03115 EMBL:AY062739 EMBL:AY114663 IPI:IPI00533005
            IPI:IPI00846901 IPI:IPI00846969 PIR:F86333 RefSeq:NP_001077565.1
            RefSeq:NP_001077566.1 RefSeq:NP_173431.1 UniGene:At.24499
            HSSP:P00455 ProteinModelPortal:Q8W493 SMR:Q8W493 IntAct:Q8W493
            STRING:Q8W493 World-2DPAGE:0003:Q8W493 PaxDb:Q8W493 PRIDE:Q8W493
            ProMEX:Q8W493 EnsemblPlants:AT1G20020.1 GeneID:838591
            KEGG:ath:AT1G20020 TAIR:At1g20020 InParanoid:Q8W493 OMA:GIDWFDY
            PhylomeDB:Q8W493 BioCyc:ARA:AT1G20020-MONOMER Genevestigator:Q8W493
            Uniprot:Q8W493
        Length = 369

 Score = 140 (54.3 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 42/167 (25%), Positives = 81/167 (48%)

Query:   128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
             ++V G  +  LC L  G  V+++  +G+    + + P D   TV++ ATG+GI+P RS +
Sbjct:   181 ETVKGVCSNFLCDLAPGSDVKLTGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFL 236

Query:   188 ESGFSSKERSDVR------LYYGARNLKRMAYQDKFKEWESSG---VKIVPVLSQPDGNW 238
                F  K   D +      L+ G      + YQ++F + ++      ++   +S+   N 
Sbjct:   237 WKMFFEKH-DDYKFNGLAWLFLGVPTTSSLLYQEEFDKMKAKAPENFRVDYAISREQAND 295

Query:   239 SGETGYVQAAFSR--AK--KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
              GE  Y+Q   ++  A+  ++     T V +CG K M + +  I+++
Sbjct:   296 KGEKMYIQTRMAQYAAELWELLKKDNTFVYMCGLKGMEKGIDDIMVS 342


>TIGR_CMR|CPS_1085 [details] [associations]
            symbol:CPS_1085 "NADH:ubiquinone oxidoreductase,
            Na(+)-translocating, F subunit" species:167879 "Colwellia
            psychrerythraea 34H" [GO:0006814 "sodium ion transport"
            evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
            activity" evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041
            InterPro:IPR001433 InterPro:IPR010205 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175 PROSITE:PS51085
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021 GO:GO:0005886
            GO:GO:0009055 GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR
            GO:GO:0006814 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
            SUPFAM:SSF54292 InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0016655
            GO:GO:0009276 eggNOG:COG2871 KO:K00351 OMA:ANYPEEK
            ProtClustDB:PRK05464 TIGRFAMs:TIGR01941 RefSeq:YP_267829.1
            ProteinModelPortal:Q487D6 SMR:Q487D6 STRING:Q487D6 GeneID:3521615
            KEGG:cps:CPS_1085 PATRIC:21465441 HOGENOM:HOG000263661
            BioCyc:CPSY167879:GI48-1167-MONOMER Uniprot:Q487D6
        Length = 407

 Score = 140 (54.3 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 47/167 (28%), Positives = 75/167 (44%)

Query:   131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
             AG  +  +  LK GD V IS   G  FA +     +E   ++    G+G++P+RS I   
Sbjct:   241 AGKMSSFIFSLKAGDKVTISGPFGEFFAKET---DNE---MVFIGGGAGMAPMRSHIFDQ 294

Query:   191 FSSKE-RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
                 E +  +  +YGAR+ + M Y+D +     ++   +    LS  QP+ NW G TG++
Sbjct:   295 LKRLESKRKMSFWYGARSKREMFYEDDYNGLAADNDNFQWHVALSDPQPEDNWDGLTGFI 354

Query:   246 Q-AAFSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                 F    K    P+     +CG   M   V  ++   GV  E I+
Sbjct:   355 HNVLFEEYLKDHEAPEDCEYYMCGPPMMNAAVIGMLKDLGVEDENIM 401


>UNIPROTKB|Q8EHV4 [details] [associations]
            symbol:nqrF "Na(+)-translocating NADH-quinone reductase
            subunit F" species:211586 "Shewanella oneidensis MR-1" [GO:0006120
            "mitochondrial electron transport, NADH to ubiquinone"
            evidence=ISS] [GO:0006814 "sodium ion transport" evidence=ISS]
            [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
            evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041 InterPro:IPR001433
            InterPro:IPR010205 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00111 Pfam:PF00175 PROSITE:PS51085 PROSITE:PS51384
            Pfam:PF00970 GO:GO:0016021 GO:GO:0005886 GO:GO:0009055
            GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008137
            GO:GO:0006120 GO:GO:0006814 GO:GO:0051537 Gene3D:3.10.20.30
            InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
            SUPFAM:SSF63380 GO:GO:0009276 KO:K00351 OMA:ANYPEEK
            ProtClustDB:PRK05464 TIGRFAMs:TIGR01941 HOGENOM:HOG000263661
            RefSeq:NP_716734.1 ProteinModelPortal:Q8EHV4 SMR:Q8EHV4
            GeneID:1168941 KEGG:son:SO_1108 PATRIC:23521857 Uniprot:Q8EHV4
        Length = 418

 Score = 140 (54.3 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 49/166 (29%), Positives = 71/166 (42%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD V IS   G  FA D      +   V I   G+G++P+RS I    
Sbjct:   253 GKMSSYIWSLKAGDKVTISGPFGEFFAKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 306

Query:   192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
                K +  +  +YGAR+ + M Y + F    +     V    LS  QP+ NW G TG++ 
Sbjct:   307 KRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIH 366

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V  ++   GV  E IL
Sbjct:   367 NVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412


>TIGR_CMR|SO_1108 [details] [associations]
            symbol:SO_1108 "NADH:ubiquinone oxidoreductase, Na
            translocating, beta subunit" species:211586 "Shewanella oneidensis
            MR-1" [GO:0006120 "mitochondrial electron transport, NADH to
            ubiquinone" evidence=ISS] [GO:0006814 "sodium ion transport"
            evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
            activity" evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041
            InterPro:IPR001433 InterPro:IPR010205 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175 PROSITE:PS51085
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021 GO:GO:0005886
            GO:GO:0009055 GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR
            GO:GO:0008137 GO:GO:0006120 GO:GO:0006814 GO:GO:0051537
            Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0009276 KO:K00351
            OMA:ANYPEEK ProtClustDB:PRK05464 TIGRFAMs:TIGR01941
            HOGENOM:HOG000263661 RefSeq:NP_716734.1 ProteinModelPortal:Q8EHV4
            SMR:Q8EHV4 GeneID:1168941 KEGG:son:SO_1108 PATRIC:23521857
            Uniprot:Q8EHV4
        Length = 418

 Score = 140 (54.3 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 49/166 (29%), Positives = 71/166 (42%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD V IS   G  FA D      +   V I   G+G++P+RS I    
Sbjct:   253 GKMSSYIWSLKAGDKVTISGPFGEFFAKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 306

Query:   192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
                K +  +  +YGAR+ + M Y + F    +     V    LS  QP+ NW G TG++ 
Sbjct:   307 KRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIH 366

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V  ++   GV  E IL
Sbjct:   367 NVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412


>UNIPROTKB|P10933 [details] [associations]
            symbol:PETH "Ferredoxin--NADP reductase, leaf isozyme,
            chloroplastic" species:3888 "Pisum sativum" [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR001433 InterPro:IPR001709
            InterPro:IPR012146 InterPro:IPR015701 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00175 PIRSF:PIRSF000361 PRINTS:PR00371
            PROSITE:PS51384 UniPathway:UPA00091 Pfam:PF00970 GO:GO:0009570
            GO:GO:0050660 GO:GO:0050661 GO:GO:0022900 GO:GO:0004324
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0009535 GO:GO:0015979
            EMBL:X12446 EMBL:L15565 EMBL:L15567 EMBL:L15569 PIR:S04030 PDB:1QFY
            PDB:1QFZ PDB:1QG0 PDB:1QGA PDB:2XNC PDB:3MHP PDB:4AF6 PDB:4AF7
            PDBsum:1QFY PDBsum:1QFZ PDBsum:1QG0 PDBsum:1QGA PDBsum:2XNC
            PDBsum:3MHP PDBsum:4AF6 PDBsum:4AF7 ProteinModelPortal:P10933
            SMR:P10933 DIP:DIP-35575N IntAct:P10933 EvolutionaryTrace:P10933
            PANTHER:PTHR19384:SF1 Uniprot:P10933
        Length = 360

 Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 44/165 (26%), Positives = 79/165 (47%)

Query:   130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
             V G  +  LC LK G  V+I+  +G+    + + P D   TV++  TG+GI+P RS +  
Sbjct:   174 VKGVCSNFLCDLKPGSEVKITGPVGK----EMLMPKDPNATVIMLGTGTGIAPFRSFLWK 229

Query:   190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
              F  K   D +      L+ G      + Y+++F   KE      ++   +S+   N  G
Sbjct:   230 MFFEKHE-DYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKG 288

Query:   241 ETGYVQAAFSR-AKKIFN---PQGTGVVLCGQKQMAEEVTSIVLA 281
             E  Y+Q   ++ A++++       T V +CG K M + +  I+++
Sbjct:   289 EKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVS 333


>UNIPROTKB|Q9X4Q8 [details] [associations]
            symbol:nqrF "Na(+)-translocating NADH-quinone reductase
            subunit F" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
            evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041 InterPro:IPR001433
            InterPro:IPR010205 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00111 Pfam:PF00175 PROSITE:PS00197 PROSITE:PS51085
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021 GO:GO:0005886
            GO:GO:0009055 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008137 GO:GO:0006814 GO:GO:0051537 Gene3D:3.10.20.30
            InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
            SUPFAM:SSF63380 GO:GO:0009276 EMBL:AF117331 PIR:B82094
            RefSeq:NP_231921.1 ProteinModelPortal:Q9X4Q8 SMR:Q9X4Q8
            DNASU:2613212 GeneID:2613212 KEGG:vch:VC2290 PATRIC:20083619
            eggNOG:COG2871 KO:K00351 OMA:ANYPEEK ProtClustDB:PRK05464
            BioCyc:MetaCyc:MONOMER-16202 BRENDA:1.6.99.5 TIGRFAMs:TIGR01941
            Uniprot:Q9X4Q8
        Length = 408

 Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 48/166 (28%), Positives = 72/166 (43%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD   IS   G  FA D      +   V I   G+G++P+RS I    
Sbjct:   243 GQMSSYIWSLKAGDKCTISGPFGEFFAKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 296

Query:   192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
                K +  +  +YGAR+ + M Y + F    +     V    LS  QP+ NW+G TG++ 
Sbjct:   297 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIH 356

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V +++   GV  E IL
Sbjct:   357 NVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENIL 402


>TIGR_CMR|VC_2290 [details] [associations]
            symbol:VC_2290 "NADH:ubiquinone oxidoreductase, Na
            translocating, beta subunit" species:686 "Vibrio cholerae O1 biovar
            El Tor" [GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
            evidence=ISS] HAMAP:MF_00430 InterPro:IPR001041 InterPro:IPR001433
            InterPro:IPR010205 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00111 Pfam:PF00175 PROSITE:PS00197 PROSITE:PS51085
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0016021 GO:GO:0005886
            GO:GO:0009055 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008137 GO:GO:0006814 GO:GO:0051537 Gene3D:3.10.20.30
            InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
            SUPFAM:SSF63380 GO:GO:0009276 EMBL:AF117331 PIR:B82094
            RefSeq:NP_231921.1 ProteinModelPortal:Q9X4Q8 SMR:Q9X4Q8
            DNASU:2613212 GeneID:2613212 KEGG:vch:VC2290 PATRIC:20083619
            eggNOG:COG2871 KO:K00351 OMA:ANYPEEK ProtClustDB:PRK05464
            BioCyc:MetaCyc:MONOMER-16202 BRENDA:1.6.99.5 TIGRFAMs:TIGR01941
            Uniprot:Q9X4Q8
        Length = 408

 Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 48/166 (28%), Positives = 72/166 (43%)

Query:   132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
             G  +  +  LK GD   IS   G  FA D      +   V I   G+G++P+RS I    
Sbjct:   243 GQMSSYIWSLKAGDKCTISGPFGEFFAKDT-----DAEMVFI-GGGAGMAPMRSHIFDQL 296

Query:   192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
                K +  +  +YGAR+ + M Y + F    +     V    LS  QP+ NW+G TG++ 
Sbjct:   297 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIH 356

Query:   247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
                  +  K    P+     +CG   M   V +++   GV  E IL
Sbjct:   357 NVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENIL 402


>UNIPROTKB|P19734 [details] [associations]
            symbol:dmpP "Phenol hydroxylase P5 protein" species:79676
            "Pseudomonas sp. CF600" [GO:0005727 "extrachromosomal circular DNA"
            evidence=IDA] [GO:0018662 "phenol 2-monooxygenase activity"
            evidence=IDA] [GO:0046191 "aerobic phenol-containing compound
            catabolic process" evidence=IDA] InterPro:IPR001041
            InterPro:IPR001221 InterPro:IPR001433 InterPro:IPR006058
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            PRINTS:PR00410 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51384
            UniPathway:UPA00728 Pfam:PF00970 GO:GO:0009055 GO:GO:0046872
            GO:GO:0022900 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
            SUPFAM:SSF54292 InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0005727
            GO:GO:0018662 GO:GO:0046191 EMBL:M60276 ProteinModelPortal:P19734
            BioCyc:MetaCyc:MONOMER-12799 Uniprot:P19734
        Length = 353

 Score = 131 (51.2 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 68/230 (29%), Positives = 101/230 (43%)

Query:    61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIXXXXXXXXXX 120
             L ++SP  + L H+ +D    P       +AGQY+ L +  +      ++          
Sbjct:   112 LVDLSPTIKGL-HIKLD-RPMP------FQAGQYVNLALPGIDGTRAFSLANPPSRNDEV 163

Query:   121 XXXEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSG 179
                  LV+  A +T  +   LK GD VE+S   G+ F  D  Q  D     LIF A GSG
Sbjct:   164 ELHVRLVEGGA-ATGFIHKQLKVGDAVELSGPYGQFFVRDS-QAGD-----LIFIAGGSG 216

Query:   180 ISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQP 234
             +S  +S+I       ER D R   L+ GARN   +   + F+E  +       VP L+Q 
Sbjct:   217 LSSPQSMI---LDLLERGDTRRITLFQGARNRAELYNCELFEELAARHPNFSYVPALNQA 273

Query:   235 --DGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCGQKQMAEE-VTSIV 279
               D  W G  G+V  A   AK  F+ +  G    LCG   M +  +T+++
Sbjct:   274 NDDPEWQGFKGFVHDA---AKAHFDGRFGGQKAYLCGPPPMIDAAITTLM 320


>UNIPROTKB|P00455 [details] [associations]
            symbol:PETH "Ferredoxin--NADP reductase, chloroplastic"
            species:3562 "Spinacia oleracea" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001433 InterPro:IPR001709
            InterPro:IPR012146 InterPro:IPR015701 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00175 PIRSF:PIRSF000361 PRINTS:PR00371
            PROSITE:PS51384 UniPathway:UPA00091 Pfam:PF00970 GO:GO:0009570
            GO:GO:0050660 GO:GO:0050661 GO:GO:0022900 GO:GO:0004324
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0009535 GO:GO:0015979
            PANTHER:PTHR19384:SF1 EMBL:X07981 EMBL:M86349 EMBL:X64351
            PIR:S00438 PDB:1BX0 PDB:1BX1 PDB:1FNB PDB:1FNC PDB:1FND PDB:1FRN
            PDB:1FRQ PDBsum:1BX0 PDBsum:1BX1 PDBsum:1FNB PDBsum:1FNC
            PDBsum:1FND PDBsum:1FRN PDBsum:1FRQ ProteinModelPortal:P00455
            SMR:P00455 IntAct:P00455 SABIO-RK:P00455 EvolutionaryTrace:P00455
            Uniprot:P00455
        Length = 369

 Score = 129 (50.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 42/174 (24%), Positives = 80/174 (45%)

Query:   128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
             +++ G  +  LC LK G  V+++  +G+    + + P D   T+++  TG+GI+P RS +
Sbjct:   181 ETIKGVCSNFLCDLKPGAEVKLTGPVGK----EMLMPKDPNATIIMLGTGTGIAPFRSFL 236

Query:   188 ESGFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNW 238
                F  K   D +      L+ G      + Y+++F   KE      ++   +S+   N 
Sbjct:   237 WKMFFEKH-DDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNE 295

Query:   239 SGETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL----AEGV 284
              GE  Y+Q   ++      ++     T   +CG K M + +  I++    AEG+
Sbjct:   296 KGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEGI 349


>UNIPROTKB|Q7WTJ2 [details] [associations]
            symbol:mphP "Phenol hydroxylase P5 protein" species:871585
            "Acinetobacter calcoaceticus PHEA-2" [GO:0005622 "intracellular"
            evidence=NAS] [GO:0018662 "phenol 2-monooxygenase activity"
            evidence=ISS] [GO:0046191 "aerobic phenol-containing compound
            catabolic process" evidence=ISS] InterPro:IPR001041
            InterPro:IPR001221 InterPro:IPR001433 InterPro:IPR006058
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            PRINTS:PR00410 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51384
            UniPathway:UPA00728 Pfam:PF00970 GO:GO:0009055 GO:GO:0046872
            GO:GO:0022900 GO:GO:0005622 GO:GO:0051537 Gene3D:3.10.20.30
            InterPro:IPR012675 SUPFAM:SSF54292 InterPro:IPR008333
            SUPFAM:SSF63380 EMBL:AJ564846 EMBL:CP002177
            GenomeReviews:CP002177_GR GO:GO:0018662 GO:GO:0046191
            RefSeq:YP_004994738.1 ProteinModelPortal:Q7WTJ2 GeneID:11638648
            KEGG:acc:BDGL_000470 PATRIC:47078982 KO:K16246 OMA:LPFACGH
            Uniprot:Q7WTJ2
        Length = 353

 Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 48/199 (24%), Positives = 89/199 (44%)

Query:    90 RAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXEFLVKSVAGSTAEVLCG--LKKGDVV 147
             +AGQY+ ++  ++      +I             E  ++ V G  A       L  GD +
Sbjct:   133 QAGQYINVQFPNIEGTRAFSIANSPSEVGIV---ELHIRKVEGGAATTYVHEQLATGDQL 189

Query:   148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
             +IS   G+ F    ++  D+   + I A GSG+S  +S+I     S +   + L+ GAR+
Sbjct:   190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244

Query:   208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
             L  +  ++ F++   +    + +P L+  +P+  W+G TG+V  A +     F  +  G 
Sbjct:   245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301

Query:   262 GVVLCGQKQMAEEVTSIVL 280
                LCG   M +   S ++
Sbjct:   302 KAYLCGPPIMIDSAISTLM 320


>UNIPROTKB|Q4KIN9 [details] [associations]
            symbol:antC "Anthranilate dioxygenase reductase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006725 "cellular
            aromatic compound metabolic process" evidence=ISS] [GO:0018618
            "anthranilate 1,2-dioxygenase (deaminating, decarboxylating)
            activity" evidence=ISS] InterPro:IPR001041 InterPro:IPR001221
            InterPro:IPR001433 InterPro:IPR001709 InterPro:IPR006058
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            PRINTS:PR00371 PRINTS:PR00410 PROSITE:PS00197 PROSITE:PS51085
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0009055 GO:GO:0046872
            GO:GO:0016702 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0051537
            Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292 eggNOG:COG0543
            InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0006725
            HOGENOM:HOG000263663 RefSeq:YP_257894.1 ProteinModelPortal:Q4KIN9
            STRING:Q4KIN9 GeneID:3481342 KEGG:pfl:PFL_0757 PATRIC:19870691
            KO:K11311 OMA:PPMVEAI ProtClustDB:PRK11872
            BioCyc:PFLU220664:GIX8-761-MONOMER GO:GO:0018618 Uniprot:Q4KIN9
        Length = 340

 Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 30/134 (22%), Positives = 65/134 (48%)

Query:   144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
             GD +++   +G  F + +I  P     +++ A G+G+S + +++E       +  V LYY
Sbjct:   191 GDTLQLEAPLG-AFYLRQISRP-----LILVAGGTGLSALLAMLEQIVEQGCQQPVHLYY 244

Query:   204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
             G R+ + +   ++ +      +  +  PV+S  + +W G+ GY+   F  ++     Q T
Sbjct:   245 GVRHSRDLCELERIQAHGERLADFRFTPVISDANPDWPGKRGYISEHFDSSE--LRDQDT 302

Query:   262 GVVLCGQKQMAEEV 275
              + +CG   M + +
Sbjct:   303 DMYVCGPPPMVDSI 316


>UNIPROTKB|Q9KL25 [details] [associations]
            symbol:VC_A0924 "Putative uncharacterized protein"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001041 InterPro:IPR001433
            InterPro:IPR001834 InterPro:IPR005302 InterPro:IPR006058
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175
            Pfam:PF03473 PRINTS:PR00406 PROSITE:PS00197 PROSITE:PS51085
            PROSITE:PS51340 PROSITE:PS51384 Pfam:PF00970 GO:GO:0030170
            GO:GO:0009055 GO:GO:0006810 GO:GO:0016491 EMBL:AE003853
            GenomeReviews:AE003853_GR GO:GO:0051537 Gene3D:3.10.20.30
            InterPro:IPR012675 SUPFAM:SSF54292 GO:GO:0030151 InterPro:IPR008333
            SUPFAM:SSF63380 HSSP:P00235 InterPro:IPR011037 SUPFAM:SSF50800
            InterPro:IPR005303 Pfam:PF03476 KO:K07140 OMA:RYAISVK PIR:H82401
            RefSeq:NP_233309.1 ProteinModelPortal:Q9KL25 DNASU:2612897
            GeneID:2612897 KEGG:vch:VCA0924 PATRIC:20086380
            ProtClustDB:CLSK869826 Uniprot:Q9KL25
        Length = 662

 Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 49/218 (22%), Positives = 94/218 (43%)

Query:    74 VSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXEFLVKSVAGS 133
             V+  +    +IA+ +   GQYL + +V  G+P                     VK + G 
Sbjct:   352 VTFWLEPTQEIATQYF-PGQYLPIEMVIEGEPV-QRYYTLSSSPSRPGRLAISVKRIDGG 409

Query:   134 TAE--VLCGLKKGDVVEISQVMGRGFAVDR--IQPPDEYPTVLIFATGSGISPIRSLIES 189
                  +   L+ G  +      G  F +D   +QP      +L+ + GSG++P+ S++  
Sbjct:   410 RVSNWLQENLQIGTTLTAQHPTGH-FHLDTTALQP------LLLLSAGSGVTPMLSMLRY 462

Query:   190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQA 247
                  +  DV  Y+  R+ + +  Q +      + +G+ ++  L+QP   W GE G  + 
Sbjct:   463 LADHNQLDDVVFYHQCRSEQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQG--RL 520

Query:   248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVS 285
             + S  K+I N     V +CG     ++  +++L +GV+
Sbjct:   521 SLSHIKRIPNLVSRQVFVCGPDGFMQKAKNLLLKQGVA 558


>TIGR_CMR|VC_A0924 [details] [associations]
            symbol:VC_A0924 "conserved hypothetical protein"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001041 InterPro:IPR001433 InterPro:IPR001834
            InterPro:IPR005302 InterPro:IPR006058 InterPro:IPR017927
            InterPro:IPR017938 Pfam:PF00111 Pfam:PF00175 Pfam:PF03473
            PRINTS:PR00406 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51340
            PROSITE:PS51384 Pfam:PF00970 GO:GO:0030170 GO:GO:0009055
            GO:GO:0006810 GO:GO:0016491 EMBL:AE003853 GenomeReviews:AE003853_GR
            GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
            GO:GO:0030151 InterPro:IPR008333 SUPFAM:SSF63380 HSSP:P00235
            InterPro:IPR011037 SUPFAM:SSF50800 InterPro:IPR005303 Pfam:PF03476
            KO:K07140 OMA:RYAISVK PIR:H82401 RefSeq:NP_233309.1
            ProteinModelPortal:Q9KL25 DNASU:2612897 GeneID:2612897
            KEGG:vch:VCA0924 PATRIC:20086380 ProtClustDB:CLSK869826
            Uniprot:Q9KL25
        Length = 662

 Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 49/218 (22%), Positives = 94/218 (43%)

Query:    74 VSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIXXXXXXXXXXXXXEFLVKSVAGS 133
             V+  +    +IA+ +   GQYL + +V  G+P                     VK + G 
Sbjct:   352 VTFWLEPTQEIATQYF-PGQYLPIEMVIEGEPV-QRYYTLSSSPSRPGRLAISVKRIDGG 409

Query:   134 TAE--VLCGLKKGDVVEISQVMGRGFAVDR--IQPPDEYPTVLIFATGSGISPIRSLIES 189
                  +   L+ G  +      G  F +D   +QP      +L+ + GSG++P+ S++  
Sbjct:   410 RVSNWLQENLQIGTTLTAQHPTGH-FHLDTTALQP------LLLLSAGSGVTPMLSMLRY 462

Query:   190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQA 247
                  +  DV  Y+  R+ + +  Q +      + +G+ ++  L+QP   W GE G  + 
Sbjct:   463 LADHNQLDDVVFYHQCRSEQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQG--RL 520

Query:   248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVS 285
             + S  K+I N     V +CG     ++  +++L +GV+
Sbjct:   521 SLSHIKRIPNLVSRQVFVCGPDGFMQKAKNLLLKQGVA 558


>UNIPROTKB|P0AEN1 [details] [associations]
            symbol:fre "riboflavin reductase [NAD(P)H] / FMN reductase"
            species:83333 "Escherichia coli K-12" [GO:0052875 "riboflavin
            reductase (NADH) activity" evidence=IEA] [GO:0042602 "riboflavin
            reductase (NADPH) activity" evidence=IEA] [GO:0055072 "iron ion
            homeostasis" evidence=IEA] [GO:0055114 "oxidation-reduction
            process" evidence=IEA] [GO:0047138 "aquacobalamin reductase
            activity" evidence=IEA] [GO:0016491 "oxidoreductase activity"
            evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
            "transport" evidence=IEA] InterPro:IPR001221 InterPro:IPR001433
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00175 PRINTS:PR00410
            PROSITE:PS51384 Pfam:PF00970 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006811
            eggNOG:COG0543 InterPro:IPR008333 SUPFAM:SSF63380 GO:GO:0042602
            EMBL:M87049 GO:GO:0055072 EMBL:M61182 EMBL:M85227 EMBL:M74448
            PIR:A39434 RefSeq:NP_418286.1 RefSeq:YP_491600.1 PDB:1QFJ
            PDBsum:1QFJ ProteinModelPortal:P0AEN1 SMR:P0AEN1 IntAct:P0AEN1
            PRIDE:P0AEN1 EnsemblBacteria:EBESCT00000002824
            EnsemblBacteria:EBESCT00000017302 GeneID:12933009 GeneID:948325
            KEGG:ecj:Y75_p3336 KEGG:eco:b3844 PATRIC:32123185 EchoBASE:EB0330
            EcoGene:EG10334 HOGENOM:HOG000269618 KO:K05368 OMA:THIDIEA
            ProtClustDB:PRK08051 BioCyc:EcoCyc:FMNREDUCT-MONOMER
            BioCyc:ECOL316407:JW3820-MONOMER BioCyc:MetaCyc:FMNREDUCT-MONOMER
            EvolutionaryTrace:P0AEN1 Genevestigator:P0AEN1 GO:GO:0047138
            GO:GO:0052875 Uniprot:P0AEN1
        Length = 233

 Score = 118 (46.6 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 26/89 (29%), Positives = 48/89 (53%)

Query:   162 IQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK--E 219
             ++  +E P +LI A G+G S  RS++ +  +     D+ +Y+G R  + +    + +   
Sbjct:    98 LRDDEERPMILI-AGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALS 156

Query:   220 WESSGVKIVPVLSQPDGNWSGETGYVQAA 248
              +  G+++VPV+ QP+  W G TG V  A
Sbjct:   157 LKHPGLQVVPVVEQPEAGWRGRTGTVLTA 185


>TIGR_CMR|SO_0504 [details] [associations]
            symbol:SO_0504 "NAD(P)H-flavin reductase" species:211586
            "Shewanella oneidensis MR-1" [GO:0009394 "2'-deoxyribonucleotide
            metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
            activity" evidence=ISS] InterPro:IPR001221 InterPro:IPR001433
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00175 PRINTS:PR00410
            PROSITE:PS51384 GO:GO:0016491 EMBL:AE014299
            GenomeReviews:AE014299_GR SUPFAM:SSF63380 HOGENOM:HOG000269618
            KO:K05368 OMA:THIDIEA ProtClustDB:PRK08051 RefSeq:NP_716140.1
            HSSP:P23486 ProteinModelPortal:Q8EJG3 GeneID:1168376
            KEGG:son:SO_0504 PATRIC:23520697 Uniprot:Q8EJG3
        Length = 232

 Score = 117 (46.2 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 29/115 (25%), Positives = 52/115 (45%)

Query:   172 LIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVP 229
             L+ A G+G S I+S++E   +  ++ +  LY+G R    M Y+   + W  +   +  VP
Sbjct:   106 LLIAGGTGFSYIKSIVEQQIALGQQVETTLYWGCRTQDAMYYESIARAWHDAHPWLHFVP 165

Query:   230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
             V+ +   NW G+T  + A   +     +  G  + + G+  M      I    GV
Sbjct:   166 VVEEATANWQGKTANLLAQIRQ--DFISLNGYDIYIAGRFDMVGAAREIFREMGV 218


>UNIPROTKB|Q4K5Q5 [details] [associations]
            symbol:fpr_2 "Ferredoxin--NADP(+) reductase" species:220664
            "Pseudomonas protegens Pf-5" [GO:0004324 "ferredoxin-NADP+
            reductase activity" evidence=ISS] [GO:0055114 "oxidation-reduction
            process" evidence=ISS] InterPro:IPR001221 InterPro:IPR001433
            InterPro:IPR001709 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00175 PRINTS:PR00371 PRINTS:PR00410 PROSITE:PS51384
            Pfam:PF00970 EMBL:CP000076 GenomeReviews:CP000076_GR KO:K00528
            GO:GO:0004324 InterPro:IPR008333 SUPFAM:SSF63380 eggNOG:COG1018
            HOGENOM:HOG000265758 OMA:RFKNIVL ProtClustDB:CLSK868780
            RefSeq:YP_262428.1 ProteinModelPortal:Q4K5Q5 STRING:Q4K5Q5
            GeneID:3479752 KEGG:pfl:PFL_5360 PATRIC:19880205
            BioCyc:PFLU220664:GIX8-5401-MONOMER Uniprot:Q4K5Q5
        Length = 258

 Score = 117 (46.2 bits), Expect = 9.5e-05, P = 9.5e-05
 Identities = 57/245 (23%), Positives = 101/245 (41%)

Query:    56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIXXXXX 115
             +T   L E+ P   SLF     +    D A    RAGQ+ +L V      T         
Sbjct:     8 YTRQTLLEVQPLTSSLF----TLRTTRD-AGFRFRAGQFARLGVTKADGSTVWRAYSMVS 62

Query:   116 XXXXXXXXEFLVKSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDEYPTVLIF 174
                      F +    G     L  L+ GD + +  Q  G    +DR     +   + + 
Sbjct:    63 SPFDEFLEFFSIVVPGGEFTSELSRLEVGDSLLVDRQAFGY-LTLDRFVDGRD---LWLL 118

Query:   175 ATGSGISPIRSLIESGFSSKERSD-VRLYYGARNLKRMAYQDKFKEWE--------SSGV 225
             +TG+GI+P  S+++  F   E+ + + L Y  R  K +AYQ    E          +  +
Sbjct:   119 STGTGIAPFLSILQD-FEVWEKFERIILVYSVREAKELAYQRLLAELSQREYLAEFAHKL 177

Query:   226 KIVPVLS--QPDGNWSGE-TGYVQ-AAFSRAKKI-FNPQGTGVVLCGQKQMAEEVTSIVL 280
             + +  ++  Q  G+ +G  T  ++     RA  +  +P+ + V+LCG  QM ++  +++ 
Sbjct:   178 QFISTVTREQHPGSLNGRITQLIENGELERAAGVELSPEHSRVMLCGNPQMIDDTRALLK 237

Query:   281 AEGVS 285
               G+S
Sbjct:   238 QRGMS 242


>UNIPROTKB|Q9KV46 [details] [associations]
            symbol:VC_0312 "NAD(P)H-flavin reductase" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0016491
            "oxidoreductase activity" evidence=ISS] InterPro:IPR001221
            InterPro:IPR001433 InterPro:IPR017927 InterPro:IPR017938
            Pfam:PF00175 PRINTS:PR00410 PROSITE:PS51384 Pfam:PF00970
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016491
            InterPro:IPR008333 SUPFAM:SSF63380 KO:K05368 OMA:THIDIEA
            ProtClustDB:PRK08051 HSSP:P23486 PIR:A82339 RefSeq:NP_229966.1
            ProteinModelPortal:Q9KV46 DNASU:2614981 GeneID:2614981
            KEGG:vch:VC0312 PATRIC:20079667 Uniprot:Q9KV46
        Length = 236

 Score = 116 (45.9 bits), Expect = 9.6e-05, P = 9.6e-05
 Identities = 29/108 (26%), Positives = 60/108 (55%)

Query:   167 EYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSG 224
             E P +LI A G+G S +RS+++   S  +   + LY+GAR+  ++   ++ +E   + + 
Sbjct:   106 ERPLLLI-AGGTGFSYVRSILDHCLSQGKTQPIYLYWGARDAAQLYALNELQELAKQHAH 164

Query:   225 VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMA 272
             +++VPV+ Q   +W+G+ G V  A +      + +   + + G+ +MA
Sbjct:   165 LQVVPVVEQAQDDWAGKVGNVLQAINN--DFASLEAFDIYIAGRFEMA 210


>TIGR_CMR|VC_0312 [details] [associations]
            symbol:VC_0312 "NAD(P)H-flavin reductase" species:686
            "Vibrio cholerae O1 biovar El Tor" [GO:0016491 "oxidoreductase
            activity" evidence=ISS] InterPro:IPR001221 InterPro:IPR001433
            InterPro:IPR017927 InterPro:IPR017938 Pfam:PF00175 PRINTS:PR00410
            PROSITE:PS51384 Pfam:PF00970 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0016491 InterPro:IPR008333
            SUPFAM:SSF63380 KO:K05368 OMA:THIDIEA ProtClustDB:PRK08051
            HSSP:P23486 PIR:A82339 RefSeq:NP_229966.1 ProteinModelPortal:Q9KV46
            DNASU:2614981 GeneID:2614981 KEGG:vch:VC0312 PATRIC:20079667
            Uniprot:Q9KV46
        Length = 236

 Score = 116 (45.9 bits), Expect = 9.6e-05, P = 9.6e-05
 Identities = 29/108 (26%), Positives = 60/108 (55%)

Query:   167 EYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSG 224
             E P +LI A G+G S +RS+++   S  +   + LY+GAR+  ++   ++ +E   + + 
Sbjct:   106 ERPLLLI-AGGTGFSYVRSILDHCLSQGKTQPIYLYWGARDAAQLYALNELQELAKQHAH 164

Query:   225 VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMA 272
             +++VPV+ Q   +W+G+ G V  A +      + +   + + G+ +MA
Sbjct:   165 LQVVPVVEQAQDDWAGKVGNVLQAINN--DFASLEAFDIYIAGRFEMA 210


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      293       267   0.00095  114 3  11 22  0.36    34
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  25
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  181 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.99u 0.20s 20.19t   Elapsed:  00:00:01
  Total cpu time:  19.99u 0.20s 20.19t   Elapsed:  00:00:01
  Start:  Fri May 10 13:34:13 2013   End:  Fri May 10 13:34:14 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G15140 AT1G15140 AT1G15140	protein from Arabidopsis thaliana	4.5e-98
BLAST match view associations BLAST with CHY_0934 CHY_0934 CHY_0934 hydrogenase, gamma subunit	protein from Carboxydothermus hydrogenoformans Z-2901	2.0e-11
BLAST match view associations BLAST with GSU_0085 GSU_0085 GSU_0085 heterodisulfide reductase, cytochrome reductase subunit	protein from Geobacter sulfurreducens PCA	1.4e-09
BLAST match view associations BLAST with SPO_A0033 SPO_A0033 SPO_A0033 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit	protein from Ruegeria pomeroyi DSS-3	1.8e-07
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Shewanella oneidensis MR-1	2.4e-07
BLAST match view associations BLAST with SO_0907 SO_0907 SO_0907 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Shewanella oneidensis MR-1	2.4e-07
BLAST match view associations BLAST with FNR1 FNR1 FNR1 AT5G66190	protein from Arabidopsis thaliana	3.2e-07
BLAST match view associations BLAST with FNR2 FNR2 FNR2 AT1G20020	protein from Arabidopsis thaliana	4.5e-07
BLAST match view associations BLAST with CPS_1085 CPS_1085 CPS_1085 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit	protein from Colwellia psychrerythraea 34H	5.4e-07
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Shewanella oneidensis MR-1	5.7e-07
BLAST match view associations BLAST with SO_1108 SO_1108 SO_1108 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Shewanella oneidensis MR-1	5.7e-07
BLAST match view associations BLAST with PETH PETH PETH Ferredoxin--NADP reductase, leaf isozyme, chloroplastic	protein from Pisum sativum	1.2e-06
BLAST match view associations BLAST with nqrF nqrF nqrF Na(+)-translocating NADH-quinone reductase subunit F	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.7e-06
BLAST match view associations BLAST with VC_2290 VC_2290 VC_2290 NADH:ubiquinone oxidoreductase, Na translocating, beta subunit	protein from Vibrio cholerae O1 biovar El Tor	2.7e-06
BLAST match view associations BLAST with dmpP dmpP dmpP Phenol hydroxylase P5 protein	protein from Pseudomonas sp. CF600	4.5e-06
BLAST match view associations BLAST with PETH PETH PETH Ferredoxin--NADP reductase, chloroplastic	protein from Spinacia oleracea	8.4e-06
BLAST match view associations BLAST with mphP mphP mphP Phenol hydroxylase P5 protein	protein from Acinetobacter calcoaceticus PHEA-2	2.2e-05
BLAST match view associations BLAST with antC antC antC Anthranilate dioxygenase reductase	protein from Pseudomonas protegens Pf-5	3.5e-05
BLAST match view associations BLAST with VC_A0924 VC_A0924 VC_A0924 Putative uncharacterized protein	protein from Vibrio cholerae O1 biovar El Tor str. N16961	3.5e-05
BLAST match view associations BLAST with VC_A0924 VC_A0924 VC_A0924 conserved hypothetical protein	protein from Vibrio cholerae O1 biovar El Tor	3.5e-05
BLAST match view associations BLAST with fre fre fre riboflavin reductase [NAD(P)H] / FMN reductase	protein from Escherichia coli K-12	5.4e-05
BLAST match view associations BLAST with SO_0504 SO_0504 SO_0504 NAD(P)H-flavin reductase	protein from Shewanella oneidensis MR-1	7.0e-05
BLAST match view associations BLAST with fpr_2 fpr_2 fpr_2 Ferredoxin--NADP(+) reductase	protein from Pseudomonas protegens Pf-5	9.5e-05
BLAST match view associations BLAST with VC_0312 VC_0312 VC_0312 NAD(P)H-flavin reductase	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.6e-05
BLAST match view associations BLAST with VC_0312 VC_0312 VC_0312 NAD(P)H-flavin reductase	protein from Vibrio cholerae O1 biovar El Tor	9.6e-05