BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022710
(293 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224111562|ref|XP_002315901.1| predicted protein [Populus trichocarpa]
gi|222864941|gb|EEF02072.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/256 (80%), Positives = 236/256 (92%), Gaps = 1/256 (0%)
Query: 38 RRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQL 97
RRRLAT+AAA VRQDTT+WT PL+EI PAAESLFHVSID+SD PD+A+SHTRAGQYLQL
Sbjct: 1 RRRLATVAAA-VRQDTTIWTQAPLSEIEPAAESLFHVSIDVSDYPDLAASHTRAGQYLQL 59
Query: 98 RVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGF 157
RV DV KP+FLAIASPPS+A+ GAFEFLVKSVAGSTAE+LCGLKKGDVVE+SQ GRGF
Sbjct: 60 RVPDVEKPSFLAIASPPSYAAEKGAFEFLVKSVAGSTAELLCGLKKGDVVELSQATGRGF 119
Query: 158 AVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKF 217
+D+I+P ++YPTVLIFATGSGISPIRSLIESGFS+ +RSDVRLYYGARN+KRMAYQD+F
Sbjct: 120 EIDQIEPAEKYPTVLIFATGSGISPIRSLIESGFSADKRSDVRLYYGARNIKRMAYQDRF 179
Query: 218 KEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTS 277
K+WESSGVKIVPVLSQPDG W+GETGYVQAAF+ AK+I++P GTG VLCGQKQM EE+TS
Sbjct: 180 KDWESSGVKIVPVLSQPDGRWTGETGYVQAAFAMAKQIYSPTGTGAVLCGQKQMTEEITS 239
Query: 278 IVLAEGVSSEKILKNF 293
I++++GVS EKILKNF
Sbjct: 240 ILVSDGVSIEKILKNF 255
>gi|225424144|ref|XP_002283966.1| PREDICTED: fruit protein pKIWI502 [Vitis vinifera]
Length = 290
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/292 (71%), Positives = 248/292 (84%), Gaps = 11/292 (3%)
Query: 2 ALALSPSPSLPHAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL 61
+++L+P PHAH PMSI+R HLK RRR ++AAA +RQDTTVWTP PL
Sbjct: 10 SVSLTPHLRFPHAHRKY---PMSIIR-----HLK--RRRFTSIAAA-LRQDTTVWTPAPL 58
Query: 62 AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASG 121
+ + PAA+SLFHV+ID+SD+PDI SSH+ AGQYLQLR+ D KP+FLAIASPPS A+A G
Sbjct: 59 SSVHPAADSLFHVTIDVSDSPDILSSHSSAGQYLQLRLPDFAKPSFLAIASPPSLAAARG 118
Query: 122 AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
FEFLVKSV GSTAE+LCGLKKGDVVE++ MGRGF +DRI PP++Y TVLIFATGSGIS
Sbjct: 119 EFEFLVKSVPGSTAELLCGLKKGDVVELTPAMGRGFDIDRISPPEDYHTVLIFATGSGIS 178
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGE 241
PIRSLIESGFS+ +RSDVRLYYGARNL+RMAYQD+FK+WES+GVKIVPVLSQPD +W+GE
Sbjct: 179 PIRSLIESGFSADKRSDVRLYYGARNLQRMAYQDRFKDWESTGVKIVPVLSQPDNSWTGE 238
Query: 242 TGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
TGYVQAAF+RAKKI++PQ TG VLCGQ QM EEVTSI++ +GVSSEKILKNF
Sbjct: 239 TGYVQAAFARAKKIYSPQSTGAVLCGQGQMTEEVTSILVTDGVSSEKILKNF 290
>gi|147838607|emb|CAN69513.1| hypothetical protein VITISV_018719 [Vitis vinifera]
Length = 290
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/292 (71%), Positives = 247/292 (84%), Gaps = 11/292 (3%)
Query: 2 ALALSPSPSLPHAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL 61
+++L+P PHAH PMSI+R HLK RRR ++AAA +RQDTTVWTP PL
Sbjct: 10 SVSLTPHLRFPHAHRKY---PMSIIR-----HLK--RRRFTSIAAA-LRQDTTVWTPAPL 58
Query: 62 AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASG 121
+ + PAA+SLFHV+ID+SD+PDI SSH+ AGQYLQLR+ D KP+FLAIASP S A+A G
Sbjct: 59 SSVHPAADSLFHVTIDVSDSPDILSSHSSAGQYLQLRLPDFAKPSFLAIASPXSLAAARG 118
Query: 122 AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
FEFLVKSV GSTAE+LCGLKKGDVVE++ MGRGF +DRI PP++Y TVLIFATGSGIS
Sbjct: 119 EFEFLVKSVPGSTAELLCGLKKGDVVELTPAMGRGFDIDRISPPEDYHTVLIFATGSGIS 178
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGE 241
PIRSLIESGFS+ +RSDVRLYYGARNL+RMAYQD+FK+WES+GVKIVPVLSQPD +W+GE
Sbjct: 179 PIRSLIESGFSADKRSDVRLYYGARNLQRMAYQDRFKDWESTGVKIVPVLSQPDNSWTGE 238
Query: 242 TGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
TGYVQAAF+RAKKI++PQ TG VLCGQ QM EEVTSI++ +GVSSEKILKNF
Sbjct: 239 TGYVQAAFARAKKIYSPQSTGAVLCGQGQMTEEVTSILVTDGVSSEKILKNF 290
>gi|356536242|ref|XP_003536648.1| PREDICTED: fruit protein pKIWI502-like [Glycine max]
Length = 295
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/299 (71%), Positives = 250/299 (83%), Gaps = 10/299 (3%)
Query: 1 MALALSPSPSL------PHAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAAAVRQDTT 54
M+L SP PSL PH H S P MSILRR+PL +RRRLAT++AA +RQDT
Sbjct: 1 MSLLFSPPPSLTGLSLHPHVHFS---PSMSILRRLPLNLRTTRRRRLATVSAA-LRQDTA 56
Query: 55 VWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPP 114
VWTP PL+E+ AAESLFH++ID+SDAPD+A+SHT AGQYLQLRV D KP+FLAIASPP
Sbjct: 57 VWTPAPLSEVEHAAESLFHIAIDVSDAPDLAASHTLAGQYLQLRVPDAPKPSFLAIASPP 116
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
A+A G FEFLVKSVAGSTAE LC LK+GDVVE+SQVMG GF +DRI PP+ + TVL+F
Sbjct: 117 KLAAARGVFEFLVKSVAGSTAEALCALKRGDVVELSQVMGNGFDIDRIHPPENFGTVLVF 176
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQP 234
ATGSGISPIRSLIESGF + +RSDVRLYYGARNL+RMAYQD+FK+WESSGVKIVPVLSQP
Sbjct: 177 ATGSGISPIRSLIESGFDAGKRSDVRLYYGARNLQRMAYQDRFKDWESSGVKIVPVLSQP 236
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
D NW+GE+GYVQAAFSR K+I +P TG VLCGQKQM EEVTSI++A+GVS++KILKNF
Sbjct: 237 DENWTGESGYVQAAFSREKQISDPLTTGAVLCGQKQMTEEVTSILVADGVSADKILKNF 295
>gi|297849940|ref|XP_002892851.1| oxidoreductase NAD-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338693|gb|EFH69110.1| oxidoreductase NAD-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 295
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/289 (71%), Positives = 245/289 (84%), Gaps = 3/289 (1%)
Query: 8 SPSLPHAHVSQTFPPMSILRRIPL---LHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEI 64
+PS+ HAH S + PM ILRR+PL L L R + ++AAAVRQD ++WTP PL+ I
Sbjct: 7 APSVTHAHFSHSLSPMFILRRLPLTRHLRLSRNNRVASVVSAAAVRQDASLWTPAPLSLI 66
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
AAESLFH+SIDIS+APD+ +S+TR GQYLQLRV DV KP+F+AIASPPS A++ GAFE
Sbjct: 67 ESAAESLFHISIDISNAPDLVASYTRPGQYLQLRVPDVEKPSFMAIASPPSLAASRGAFE 126
Query: 125 FLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
FLVKS+AGSTAE+LCGLKKG+ VE+S VMG GF +D I PP++YPTVLIFATGSGISPIR
Sbjct: 127 FLVKSIAGSTAEILCGLKKGETVELSPVMGNGFNIDLIDPPEKYPTVLIFATGSGISPIR 186
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGY 244
SLIESGF + RSDVRLYYGARNLKRMAYQDKFKEWESSGVK+VPVLSQPD W GETGY
Sbjct: 187 SLIESGFGADRRSDVRLYYGARNLKRMAYQDKFKEWESSGVKVVPVLSQPDDGWKGETGY 246
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VQAAF+RAK++ P+ TG VLCGQKQMAEE+TSI++A+GVS++K+LKNF
Sbjct: 247 VQAAFARAKQLAAPKATGAVLCGQKQMAEEITSILVADGVSNDKLLKNF 295
>gi|357444597|ref|XP_003592576.1| Fruit protein pKIWI502 [Medicago truncatula]
gi|355481624|gb|AES62827.1| Fruit protein pKIWI502 [Medicago truncatula]
Length = 385
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/295 (70%), Positives = 246/295 (83%), Gaps = 8/295 (2%)
Query: 3 LALSPSPSLPHAHVSQTFPPMSILRRIPLLHLKPQ----RRRLATLAAAAVRQDTTVWTP 58
L+L+P HAH S T PMSILRR +L P R RLATL+AA VRQDTTVWTP
Sbjct: 95 LSLTPPQIHSHAHFSPTPFPMSILRR---FNLNPTNHRLRHRLATLSAA-VRQDTTVWTP 150
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
PL+EI PAAESLFHVSID+SD+PD+A+SHTRAGQYLQL+V D KP+FLAIASPP A
Sbjct: 151 APLSEIEPAAESLFHVSIDVSDSPDLATSHTRAGQYLQLKVGDSPKPSFLAIASPPKLAI 210
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G FEFLVKSV GSTAE LCGLKKGDVVE+S VMG GF + RI PP+++ TVL+FATGS
Sbjct: 211 KLGVFEFLVKSVVGSTAEALCGLKKGDVVELSPVMGNGFDISRIDPPEKFGTVLVFATGS 270
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNW 238
GISPIRSLIESGF + +RSDVRL+YGARNLKRMAYQ++F++WESSGVKIVPVLSQ D +W
Sbjct: 271 GISPIRSLIESGFDAGKRSDVRLFYGARNLKRMAYQERFEDWESSGVKIVPVLSQADDSW 330
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
+GE+G+VQAA++RAK++ NP TG VLCGQKQM EE+TSI++A+GVS+EKILKNF
Sbjct: 331 TGESGFVQAAYTRAKELSNPSSTGAVLCGQKQMTEEITSILVADGVSAEKILKNF 385
>gi|224099439|ref|XP_002311484.1| predicted protein [Populus trichocarpa]
gi|222851304|gb|EEE88851.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/255 (78%), Positives = 235/255 (92%), Gaps = 1/255 (0%)
Query: 39 RRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLR 98
RRLAT+AAA V QDTTVWT PL+ I PAAESLFHV ID+ D+PD+A+SHTRAGQYLQLR
Sbjct: 2 RRLATVAAA-VWQDTTVWTQAPLSGIEPAAESLFHVRIDVLDSPDLAASHTRAGQYLQLR 60
Query: 99 VVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFA 158
V DV KP+FLAIASPPS A++ GAF+FLVKSVAGSTAE+LCGLK+GDVVE+SQ MGRGF
Sbjct: 61 VPDVEKPSFLAIASPPSDAASKGAFDFLVKSVAGSTAELLCGLKRGDVVELSQAMGRGFD 120
Query: 159 VDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK 218
+++I+P ++YPTVLIFATGSGISPIRSLIESGF++ +RSDVRLYYGARN+KRMAYQD+FK
Sbjct: 121 IEQIEPAEKYPTVLIFATGSGISPIRSLIESGFNADKRSDVRLYYGARNVKRMAYQDRFK 180
Query: 219 EWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSI 278
+WESSGVKIVPVLSQPD NW+GE+ YVQAAFSRAK+I++P GTGVVLCGQKQM EE+TSI
Sbjct: 181 DWESSGVKIVPVLSQPDDNWTGESNYVQAAFSRAKQIYSPTGTGVVLCGQKQMTEEITSI 240
Query: 279 VLAEGVSSEKILKNF 293
++++GVSSEKILKNF
Sbjct: 241 LVSDGVSSEKILKNF 255
>gi|18394201|ref|NP_563963.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
gi|5103813|gb|AAD39643.1|AC007591_8 Contains a PF|00175 Oxidoreductase FAD/NADH-binding domain. ESTs
gb|H76345 and gb|AA651465 come from this gene
[Arabidopsis thaliana]
gi|12744999|gb|AAK06879.1|AF344328_1 unknown protein [Arabidopsis thaliana]
gi|15451092|gb|AAK96817.1| Unknown protein [Arabidopsis thaliana]
gi|18377448|gb|AAL66890.1| unknown protein [Arabidopsis thaliana]
gi|332191150|gb|AEE29271.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
Length = 295
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/289 (69%), Positives = 243/289 (84%), Gaps = 3/289 (1%)
Query: 8 SPSLPHAHVSQTFPPMSILRRIPL---LHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEI 64
+PS+ HAH S + PM ILR +PL L L R + ++AAAVRQD ++WTP PL+ I
Sbjct: 7 APSVTHAHFSHSLSPMFILRHLPLTRHLRLSRNNRVASVVSAAAVRQDASLWTPAPLSLI 66
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
AAESLFH+SIDIS+APD+ +S+TR GQYLQ+RV DV KP+F+AIASPPS AS+ GAFE
Sbjct: 67 ESAAESLFHISIDISNAPDLVASYTRPGQYLQIRVPDVEKPSFMAIASPPSLASSRGAFE 126
Query: 125 FLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
FLVKS+AGSTAE+LCGLKKG+ VE+S VMG GF +D I PP+EYPTVLIFATGSGISPIR
Sbjct: 127 FLVKSIAGSTAEILCGLKKGETVELSSVMGNGFNIDLIDPPEEYPTVLIFATGSGISPIR 186
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGY 244
SLIESGF + RSDVRLYYGARNL RMAYQ+KFKEWES+GVK+VPVLSQPD W GETGY
Sbjct: 187 SLIESGFGADRRSDVRLYYGARNLNRMAYQEKFKEWESAGVKVVPVLSQPDDGWKGETGY 246
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VQAAF+RAK++ P+ TG VLCGQKQMAEE+TS+++A+GVS++K+LKNF
Sbjct: 247 VQAAFARAKQLSAPKATGAVLCGQKQMAEEITSMLVADGVSNDKLLKNF 295
>gi|255582909|ref|XP_002532226.1| Fruit protein PKIWI502, putative [Ricinus communis]
gi|223528083|gb|EEF30157.1| Fruit protein PKIWI502, putative [Ricinus communis]
Length = 292
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/285 (71%), Positives = 237/285 (83%), Gaps = 10/285 (3%)
Query: 11 LPHAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAAAVR--QDTTVWTPTPLAEISPAA 68
+PHAH S PMSILRR L P+ + +A+ A QDTT+W+ PL+ I PAA
Sbjct: 16 IPHAHNSH---PMSILRR-----LTPRNLNIRRVASVAAAARQDTTLWSHAPLSLIEPAA 67
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
ESLFH++ID+SD+PD+ SSH+RAGQYLQLR+ DV KP+FLAIASPPS+A+ GAFEFLVK
Sbjct: 68 ESLFHITIDVSDSPDVVSSHSRAGQYLQLRIPDVEKPSFLAIASPPSYAAKKGAFEFLVK 127
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
SV STAE+LC LKKGDVVE++Q MG GF +DRI PP++Y TVLIFATGSGISPIRSLIE
Sbjct: 128 SVPASTAELLCRLKKGDVVELTQAMGGGFDIDRISPPEKYCTVLIFATGSGISPIRSLIE 187
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAA 248
SGF + RSDVRLYYGARNL RMAYQD+FKEWESSGVKIVPVLS+PD W+GE+GYVQAA
Sbjct: 188 SGFGANRRSDVRLYYGARNLNRMAYQDRFKEWESSGVKIVPVLSEPDDRWTGESGYVQAA 247
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
FSRAK+I NP TG VLCGQKQMAEEVTSI+LA+GVSSEKILKNF
Sbjct: 248 FSRAKQIDNPVATGAVLCGQKQMAEEVTSILLADGVSSEKILKNF 292
>gi|449434568|ref|XP_004135068.1| PREDICTED: fruit protein pKIWI502-like [Cucumis sativus]
gi|449506357|ref|XP_004162727.1| PREDICTED: fruit protein pKIWI502-like [Cucumis sativus]
Length = 304
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 233/273 (85%), Gaps = 4/273 (1%)
Query: 25 ILRRIPLLHLKPQRR----RLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISD 80
++RR+ HL+ R R AT AAAAVRQDT WT PLAE+ PAAESLFHVSID+SD
Sbjct: 32 LIRRLTPGHLRFNLRHHAGRFATAAAAAVRQDTAAWTQAPLAEVEPAAESLFHVSIDVSD 91
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG 140
APD+A+SHTRAGQYLQLRV DV KPTFLAIASPP ASA G F+FLVKSV GS AE+LCG
Sbjct: 92 APDLAASHTRAGQYLQLRVPDVEKPTFLAIASPPLLASAEGVFQFLVKSVEGSIAELLCG 151
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
LKKGDVV++SQVMG+GF VD+I PP ++P+V IFATGSGISPIRSLIESGF + +R+DVR
Sbjct: 152 LKKGDVVQLSQVMGKGFDVDQIAPPQDFPSVFIFATGSGISPIRSLIESGFGASKRTDVR 211
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
LYYGARNLKRMAYQD+F EWESSGVK+VPVLSQP+ +W+G++GYVQAAFS AKK F+P
Sbjct: 212 LYYGARNLKRMAYQDRFDEWESSGVKVVPVLSQPESDWTGDSGYVQAAFSNAKKAFDPLS 271
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
TG V+CGQK M EEVTSI++A+GVSSEKILKNF
Sbjct: 272 TGAVICGQKPMTEEVTSILVADGVSSEKILKNF 304
>gi|356575613|ref|XP_003555933.1| PREDICTED: fruit protein pKIWI502-like [Glycine max]
Length = 271
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/271 (73%), Positives = 230/271 (84%)
Query: 23 MSILRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAP 82
MSILRR+ L RRR A+AA+RQDTTVWTP PL+++ AAESLFH++ID+SDAP
Sbjct: 1 MSILRRLHLNLCTTTRRRRLATASAALRQDTTVWTPAPLSKVEHAAESLFHIAIDVSDAP 60
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLK 142
D A+SHT AGQYLQLR+ D KP+FLAIASPP A+A G FEFLVKSVAGSTAE LC LK
Sbjct: 61 DHAASHTLAGQYLQLRLPDALKPSFLAIASPPKLAAARGVFEFLVKSVAGSTAEALCALK 120
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
+GDVVE+SQVMG GF +DRI PP + TVL+FATGSGISPIRSLIESGF + +RSDVRLY
Sbjct: 121 RGDVVELSQVMGNGFNIDRIHPPKNFGTVLVFATGSGISPIRSLIESGFDAAKRSDVRLY 180
Query: 203 YGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
YGARNL+RMAYQD+FK+WESSGVKIVPVLSQPD +W+GE+GYVQAAFSR K+I +P TG
Sbjct: 181 YGARNLQRMAYQDRFKDWESSGVKIVPVLSQPDESWTGESGYVQAAFSREKQISDPLATG 240
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VLCGQKQM EEVTSI++A GVS++KILKNF
Sbjct: 241 AVLCGQKQMTEEVTSILVAAGVSADKILKNF 271
>gi|42571483|ref|NP_973832.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
gi|42571485|ref|NP_973833.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
gi|332191151|gb|AEE29272.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
gi|332191152|gb|AEE29273.1| FAD/NAD(P)-binding oxidoreductase [Arabidopsis thaliana]
Length = 271
Score = 350 bits (897), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/242 (70%), Positives = 200/242 (82%), Gaps = 3/242 (1%)
Query: 8 SPSLPHAHVSQTFPPMSILRRIPL---LHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEI 64
+PS+ HAH S + PM ILR +PL L L R + ++AAAVRQD ++WTP PL+ I
Sbjct: 7 APSVTHAHFSHSLSPMFILRHLPLTRHLRLSRNNRVASVVSAAAVRQDASLWTPAPLSLI 66
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
AAESLFH+SIDIS+APD+ +S+TR GQYLQ+RV DV KP+F+AIASPPS AS+ GAFE
Sbjct: 67 ESAAESLFHISIDISNAPDLVASYTRPGQYLQIRVPDVEKPSFMAIASPPSLASSRGAFE 126
Query: 125 FLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
FLVKS+AGSTAE+LCGLKKG+ VE+S VMG GF +D I PP+EYPTVLIFATGSGISPIR
Sbjct: 127 FLVKSIAGSTAEILCGLKKGETVELSSVMGNGFNIDLIDPPEEYPTVLIFATGSGISPIR 186
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGY 244
SLIESGF + RSDVRLYYGARNL RMAYQ+KFKEWES+GVK+VPVLSQPD W GETGY
Sbjct: 187 SLIESGFGADRRSDVRLYYGARNLNRMAYQEKFKEWESAGVKVVPVLSQPDDGWKGETGY 246
Query: 245 VQ 246
VQ
Sbjct: 247 VQ 248
>gi|326530368|dbj|BAJ97610.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/296 (58%), Positives = 210/296 (70%), Gaps = 17/296 (5%)
Query: 2 ALALSPSPSLPHAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL 61
A +S +P P S F +LR +P L RRRL + A AAV+QD VW P+
Sbjct: 4 AATISATPLAP----SHAFASPKMLRSLPFL-----RRRLPSFAVAAVKQDAAVWNAAPV 54
Query: 62 AEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRV--VDVGKPTFLAIASPPSFA 117
A I A+ SLFH+ +D+SDA D+ASS T GQYL +RV D KP F+AIASPP
Sbjct: 55 ASIGAASADGSLFHLRVDLSDAADLASSFTAPGQYLLVRVPGEDDLKPAFMAIASPPG-- 112
Query: 118 SASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATG 177
GAFEFLVK+V G+TAE LCGL+ GDVVE+ VMG+GF ++R+ P D T+L+FATG
Sbjct: 113 --GGAFEFLVKAVPGATAEKLCGLRNGDVVELGAVMGKGFPIERVTPADAAETLLLFATG 170
Query: 178 SGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN 237
+GISPIRSLIE GF++K+R+DVRLYYGARNL+ MAYQ++F EWESSG+KIVPVLS+P
Sbjct: 171 TGISPIRSLIEFGFAAKQRADVRLYYGARNLETMAYQERFAEWESSGLKIVPVLSRPGDG 230
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
W GE GYVQ AF AK I NP TG VLCGQ QM EEVTS + A+GVS +KILKNF
Sbjct: 231 WKGEKGYVQRAFLEAKNIANPTSTGAVLCGQSQMIEEVTSALTADGVSQDKILKNF 286
>gi|115445869|ref|NP_001046714.1| Os02g0328300 [Oryza sativa Japonica Group]
gi|46389939|dbj|BAD15791.1| putative fruit protein [Oryza sativa Japonica Group]
gi|46390544|dbj|BAD16031.1| putative fruit protein [Oryza sativa Japonica Group]
gi|113536245|dbj|BAF08628.1| Os02g0328300 [Oryza sativa Japonica Group]
gi|215687163|dbj|BAG90933.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740793|dbj|BAG96949.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766612|dbj|BAG98674.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190633|gb|EEC73060.1| hypothetical protein OsI_07017 [Oryza sativa Indica Group]
Length = 287
Score = 312 bits (800), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 152/251 (60%), Positives = 192/251 (76%), Gaps = 8/251 (3%)
Query: 47 AAVRQDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRV--VDV 102
AAV+QD VWTP P++ PA SL H S+D+SDA D+A+S+T GQYL +RV D
Sbjct: 41 AAVQQDAAVWTPAPVSSFGPATADGSLVHFSVDLSDATDLAASYTTPGQYLLIRVPGEDE 100
Query: 103 GKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRI 162
KP F+AIASPP A AFEFLVK+V G+TAE LCGL+ GDV+E+ +MG GF + RI
Sbjct: 101 LKPAFMAIASPPGGA----AFEFLVKTVPGTTAEKLCGLRDGDVLELGAIMGNGFPISRI 156
Query: 163 QPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES 222
PPDE TVL+FATG+GISP+RSLIE GF++ +R+DVRLYYGARNL+ MAYQD+F WES
Sbjct: 157 NPPDEAQTVLLFATGTGISPVRSLIEFGFAADQRADVRLYYGARNLQTMAYQDRFTNWES 216
Query: 223 SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
+G+KI+PVLS+ D +W GE GYVQ AF +A+ I N TG VLCGQKQM+EE+TS ++A+
Sbjct: 217 TGLKIIPVLSRADDSWKGERGYVQDAFLKAQNIANHFSTGAVLCGQKQMSEEITSALVAD 276
Query: 283 GVSSEKILKNF 293
GVS +KIL N+
Sbjct: 277 GVSPDKILTNY 287
>gi|357133535|ref|XP_003568380.1| PREDICTED: fruit protein pKIWI502-like [Brachypodium distachyon]
Length = 289
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/272 (59%), Positives = 202/272 (74%), Gaps = 13/272 (4%)
Query: 26 LRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPD 83
+R +P L RR+ +LA AAV+Q+ VW P++ + PA+ SLFH+ +D+S APD
Sbjct: 27 VRSLPSL-----RRQRRSLAVAAVQQNAAVWNAVPVSSVGPASADGSLFHICVDLSGAPD 81
Query: 84 IASSHTRAGQYLQLRV--VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGL 141
+ASS+T GQYL +RV D KP FLAIASPP G FEFLVK+V G+TAE LCGL
Sbjct: 82 LASSYTAPGQYLMVRVPGEDELKPAFLAIASPP----GKGVFEFLVKTVPGATAEKLCGL 137
Query: 142 KKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRL 201
+ DV+E+ VMG GF ++RI P D TVL+FATG+GISPIRSL+E GF++ +R+DVRL
Sbjct: 138 RDEDVLELGAVMGNGFPIERITPTDAAETVLLFATGTGISPIRSLVEFGFAANQRADVRL 197
Query: 202 YYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
YYGARNL+ MAYQD+F +WES+G+KIVPVLSQPD +W G+ GYVQ AF AK I +P T
Sbjct: 198 YYGARNLQTMAYQDRFADWESTGLKIVPVLSQPDDSWQGKRGYVQHAFLEAKSIASPTST 257
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G VLCGQKQM EEVTS + AEGVS +KILKNF
Sbjct: 258 GAVLCGQKQMIEEVTSALAAEGVSQDKILKNF 289
>gi|242061674|ref|XP_002452126.1| hypothetical protein SORBIDRAFT_04g020160 [Sorghum bicolor]
gi|241931957|gb|EES05102.1| hypothetical protein SORBIDRAFT_04g020160 [Sorghum bicolor]
Length = 297
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 204/287 (71%), Gaps = 15/287 (5%)
Query: 13 HAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAA-AVRQDTTVWTPTPLAEISPAAE-- 69
AH + P+ +R +P L R RL +L A AV+QD +WTP P++ +S A
Sbjct: 20 RAHPCSSAAPLP-MRALPFL-----RSRLRSLTTAYAVKQDAALWTPAPVSAVSAATADG 73
Query: 70 SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVG---KPTFLAIASPPSFASASGAFEFL 126
S+ +V +D+SDA D+ S+T GQYL++RV G KP F+AIASPP A FEF+
Sbjct: 74 SISYVVVDLSDAADLVDSYTTPGQYLKIRVPSAGDELKPAFMAIASPPG---AGPRFEFV 130
Query: 127 VKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
VK+V G+TAE LC L+ GDVVE+ V G GFA+D+I PPD VL+FATG+GIS IRSL
Sbjct: 131 VKTVPGTTAEKLCTLRDGDVVELGAVTGDGFALDKINPPDVAQAVLMFATGTGISTIRSL 190
Query: 187 IESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
IE GF++ ER+DVRLYYGARNL+ MAYQ++FK WES+GVKI+PVLS+PD +W+GE G+VQ
Sbjct: 191 IEFGFAANERADVRLYYGARNLQSMAYQERFKNWESTGVKIIPVLSRPDDSWNGERGHVQ 250
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
AF + K I NP TG VLCGQ +M EE+TS ++A+GVS +KIL N+
Sbjct: 251 DAFFKNKNIVNPSSTGAVLCGQNEMQEEITSALVADGVSRDKILTNY 297
>gi|302789343|ref|XP_002976440.1| hypothetical protein SELMODRAFT_443172 [Selaginella moellendorffii]
gi|300156070|gb|EFJ22700.1| hypothetical protein SELMODRAFT_443172 [Selaginella moellendorffii]
Length = 310
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/263 (55%), Positives = 192/263 (73%), Gaps = 3/263 (1%)
Query: 31 LLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTR 90
L + + LAT + A +Q+ +WT PL EI+PAAE LFH+ +DI P++ H++
Sbjct: 51 LWSIARRENLLATFSMAQWKQEV-LWTSAPLVEIAPAAEQLFHIVLDIGRNPELQKGHSK 109
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
GQ++Q++ + KP F AIASPPS A A G EFLVK V G+T+ VLC L KGD V++S
Sbjct: 110 PGQFVQMKKEE-HKPGFFAIASPPSTA-AKGFLEFLVKDVEGTTSAVLCDLAKGDKVDLS 167
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
QVMG+GF +D++ PP+++ TVL FATGSGISPIRSLIE+G + RSDVRLYYGAR+L+R
Sbjct: 168 QVMGKGFDIDQLYPPEKFQTVLFFATGSGISPIRSLIEAGIDANRRSDVRLYYGARSLER 227
Query: 211 MAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQ 270
MAY+DKFKEWE+SGV I+PVLSQPDG+W GE+GYVQAAFS+ I + LCG K
Sbjct: 228 MAYRDKFKEWEASGVSIIPVLSQPDGSWMGESGYVQAAFSKNISIPDSSQVVTFLCGHKG 287
Query: 271 MAEEVTSIVLAEGVSSEKILKNF 293
M ++VT ++ AEGV EKI+ NF
Sbjct: 288 MVKDVTDLLSAEGVPQEKIILNF 310
>gi|302796137|ref|XP_002979831.1| hypothetical protein SELMODRAFT_444304 [Selaginella moellendorffii]
gi|300152591|gb|EFJ19233.1| hypothetical protein SELMODRAFT_444304 [Selaginella moellendorffii]
Length = 281
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/267 (55%), Positives = 191/267 (71%), Gaps = 3/267 (1%)
Query: 27 RRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIAS 86
R L K R+ + A +Q+ +WT PL EI+PAAE LFH+ +DI P++
Sbjct: 18 RYCSTLSKKSSSARVRFVVRAQWKQEV-LWTSAPLVEIAPAAEQLFHIVLDIGRNPELQK 76
Query: 87 SHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDV 146
H++ GQ++Q++ + KP F AIASPPS A A G EFLVK V G+T+ VLC L KGD
Sbjct: 77 GHSKPGQFVQMKKEE-HKPGFFAIASPPSTA-AKGFLEFLVKDVEGTTSAVLCDLAKGDK 134
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
V++SQVMG+GF +D++ PP+++ TVL FATGSGISPIRSLIE+G + RSDVRLYYGAR
Sbjct: 135 VDLSQVMGKGFDIDQLYPPEKFQTVLFFATGSGISPIRSLIEAGIDANRRSDVRLYYGAR 194
Query: 207 NLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+L+RMAY+DKFKEWE+SGV I+PVLSQPDG+W GE+GYVQAAFS+ I + LC
Sbjct: 195 SLERMAYRDKFKEWEASGVSIIPVLSQPDGSWMGESGYVQAAFSKNISIPDSSQVVTFLC 254
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKNF 293
G K M ++VT ++ AEGV EKI+ NF
Sbjct: 255 GHKGMVKDVTDLLSAEGVPQEKIILNF 281
>gi|226531488|ref|NP_001149045.1| LOC100282665 [Zea mays]
gi|194701174|gb|ACF84671.1| unknown [Zea mays]
gi|195624248|gb|ACG33954.1| fruit protein PKIWI502 [Zea mays]
gi|195638328|gb|ACG38632.1| fruit protein PKIWI502 [Zea mays]
gi|238014782|gb|ACR38426.1| unknown [Zea mays]
gi|413936948|gb|AFW71499.1| fruit protein PKIWI502 [Zea mays]
Length = 294
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/301 (51%), Positives = 207/301 (68%), Gaps = 18/301 (5%)
Query: 2 ALALSPSPSLP-----HAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAA-AVRQDTTV 55
A++ +P PS+P AH+ + P+ +R +PLL R R +L A AV+QDT +
Sbjct: 3 AVSAAPRPSMPPRLALRAHLFSSASPLP-MRALPLL-----RSRFRSLTTAYAVKQDTAL 56
Query: 56 WTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVV-DVGKPTFLAIAS 112
WTP P++ IS A + S+ +++D+SDA D+ S+T GQYL +RV + KP ++ I+S
Sbjct: 57 WTPAPVSAISAATDDGSVSLIAVDLSDATDLVDSYTNPGQYLLIRVPGEELKPAYMVISS 116
Query: 113 PPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
PP A FEFLVKSV G+TA LC L+ GDVVE+ V G+GF +DRI PPD TVL
Sbjct: 117 PPK---AGPRFEFLVKSVPGATAGRLCALRDGDVVELGAVTGKGFPLDRINPPDVAQTVL 173
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
IFA G+GIS IRSLIE GF++KER+DVRLYYG +LK M+YQ++ WES+G+KI+PVLS
Sbjct: 174 IFAAGTGISAIRSLIEFGFAAKERADVRLYYGDTSLKSMSYQERLSNWESTGIKIIPVLS 233
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
QPD +W GE GYVQ AF R K I NP TG +LCG +M EE+T ++A+GVS +KIL N
Sbjct: 234 QPDDSWKGERGYVQDAFFRNKNIVNPSSTGAILCGPNEMQEELTLSLVADGVSRDKILTN 293
Query: 293 F 293
+
Sbjct: 294 Y 294
>gi|167999622|ref|XP_001752516.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696416|gb|EDQ82755.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 184/249 (73%), Gaps = 2/249 (0%)
Query: 45 AAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGK 104
A AV + +W P+A+++ A E +H +D+S ++ HT+AGQ++Q++ D K
Sbjct: 3 AVRAVWKQEVLWAEAPVADVALACEEHYHFVLDVSGNRELMEGHTKAGQFVQVKFGD-SK 61
Query: 105 PTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQP 164
P FLAIAS P A ASG+ EFL+K+V G+TA +LC L KGD VE+SQVMG GF +D++ P
Sbjct: 62 PAFLAIASAPKVA-ASGSMEFLIKAVEGTTAGMLCSLGKGDKVELSQVMGSGFRMDQVAP 120
Query: 165 PDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG 224
++Y T+L+FATGSGISPIRSL+E+GF + +R DVRLYYGARNL RM+YQD+FK+WE+SG
Sbjct: 121 AEDYSTILLFATGSGISPIRSLLEAGFDAHKRKDVRLYYGARNLDRMSYQDRFKDWEASG 180
Query: 225 VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
V+++PVLSQP G W+G GYVQAAFS K TG VLCG KQMA +VT I+LA GV
Sbjct: 181 VQVIPVLSQPTGPWNGAQGYVQAAFSNDKGSIVGSQTGAVLCGHKQMALDVTDILLAAGV 240
Query: 285 SSEKILKNF 293
+ EKIL NF
Sbjct: 241 AKEKILLNF 249
>gi|195624268|gb|ACG33964.1| fruit protein PKIWI502 [Zea mays]
Length = 294
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 155/301 (51%), Positives = 206/301 (68%), Gaps = 18/301 (5%)
Query: 2 ALALSPSPSLP-----HAHVSQTFPPMSILRRIPLLHLKPQRRRLATLAAA-AVRQDTTV 55
A++ +P PS+P AH+ P+ +R +PLL R R +L A AV+QDT +
Sbjct: 3 AVSAAPRPSMPPRLALRAHLFXXAXPJP-MRALPLL-----RSRFRSLTTAYAVKQDTAL 56
Query: 56 WTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVV-DVGKPTFLAIAS 112
WTP P++ IS A + S+ +++D+SDA D+ S+T GQYL +RV + KP ++ I+S
Sbjct: 57 WTPAPVSAISAATDDXSVSLIAVDLSDATDLVDSYTNPGQYLLIRVPGEELKPAYMVISS 116
Query: 113 PPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
PP A FEFLVKSV G+TA LC L+ GDVVE+ V G+GF +DRI PPD TVL
Sbjct: 117 PPK---AGPRFEFLVKSVPGATAGRLCALRDGDVVELGAVTGKGFPLDRINPPDVAQTVL 173
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
IFA G+GIS IRSLIE GF++KER+DVRLYYG +LK M+YQ++ WES+G+KI+PVLS
Sbjct: 174 IFAAGTGISAIRSLIEFGFAAKERADVRLYYGDTSLKSMSYQERLSNWESTGIKIIPVLS 233
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
QPD +W GE GYVQ AF R K I NP TG +LCG +M EE+T ++A+GVS +KIL N
Sbjct: 234 QPDDSWKGERGYVQDAFFRNKNIVNPSSTGAILCGPNEMQEELTLSLVADGVSRDKILTN 293
Query: 293 F 293
+
Sbjct: 294 Y 294
>gi|1170601|sp|P43394.1|K502_ACTDE RecName: Full=Fruit protein pKIWI502
gi|1085869|pir||S48036 hypothetical protein - kiwi fruit
gi|450237|gb|AAA53070.1| pKIWI502 [Actinidia deliciosa]
Length = 317
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 203/301 (67%), Gaps = 15/301 (4%)
Query: 4 ALSPSPSLP-HAHVSQTFP---PMSILRRIPLLHLKPQRRRL----ATLAAAAVRQDTTV 55
+LS PSL H+ +S P P++ LR P L R L A L A+RQDT +
Sbjct: 14 SLSRHPSLTLHSSLSHAPPHHRPVAFLRH-PTLRYHHHGRLLSVASAILQDTAIRQDTYI 72
Query: 56 WTPTPLAEISPAA-ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDV-----GKPTFLA 109
WTP P++ + PAA ESLF V +D+S +PD+ + GQY+Q+R+ + +P +
Sbjct: 73 WTPVPISRVLPAAAESLFKVIVDLSRSPDLVYNFVSPGQYVQIRIPEAIVNPPPRPAYFY 132
Query: 110 IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
IASPPS + FEFL++SV G+T+EVLC LK+GDVV+++Q++GRGF +++I PP++YP
Sbjct: 133 IASPPSLVKKNLEFEFLIRSVPGTTSEVLCSLKEGDVVDLTQIIGRGFDIEQILPPEDYP 192
Query: 170 TVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
TVLI TG G+S RS IE GF + +RSDVRLYYGA NL+ M YQ++FK+WE+SGV+++P
Sbjct: 193 TVLISVTGYGMSAGRSFIEEGFGANKRSDVRLYYGAENLETMGYQERFKDWEASGVRVIP 252
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
VLS+P NW+G GYVQ + + K I +P+ TG VL G M EE I++A+GVS EKI
Sbjct: 253 VLSRPPPNWNGAVGYVQDVYLKDKPIADPRTTGAVLIGNPNMVEETRGILVAQGVSREKI 312
Query: 290 L 290
L
Sbjct: 313 L 313
>gi|257222618|gb|ACV52587.1| hypothetical protein, partial [Nicotiana benthamiana]
Length = 167
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/167 (75%), Positives = 151/167 (90%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
ESLFHV+ID+SD+PD+A+SHT+AGQYLQLR+ DV P FLAIASPP AS+ G FEFL+K
Sbjct: 1 ESLFHVTIDVSDSPDLAASHTKAGQYLQLRIPDVENPAFLAIASPPLLASSRGVFEFLIK 60
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
S++GSTAE+LCGL+K DVVE+SQVMG+GF +D+I PP +Y T+LIFATGSGISPIRSLIE
Sbjct: 61 SISGSTAELLCGLQKSDVVELSQVMGKGFDLDQISPPKKYQTILIFATGSGISPIRSLIE 120
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPD 235
+GFS+ +RSDVRLYYGARNLKRMAYQD+F+ W SSGVK+VPVLSQPD
Sbjct: 121 AGFSADKRSDVRLYYGARNLKRMAYQDRFENWASSGVKVVPVLSQPD 167
>gi|218187413|gb|EEC69840.1| hypothetical protein OsI_00167 [Oryza sativa Indica Group]
gi|222617647|gb|EEE53779.1| hypothetical protein OsJ_00173 [Oryza sativa Japonica Group]
Length = 271
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 181/274 (66%), Gaps = 9/274 (3%)
Query: 25 ILRRIP--LLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAE--SLFHVSIDISD 80
+LR P L HL+P A AAA T WT P+A + A SLFHVS+D+S
Sbjct: 2 LLRSAPRRLHHLRPHHLSTAAALAAAPPTPTE-WTTAPVASVGAATADASLFHVSLDLSS 60
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG 140
D+ +SH AGQ+L R+ P FLAI+S P + +F+FLVK + G+ + LC
Sbjct: 61 RADLLASHVAAGQFLPFRLPAAPYPIFLAISSSPPAPGLATSFDFLVKRLPGTPSACLCD 120
Query: 141 LKKGDVVEIS-QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDV 199
L+ GD+V + V+GRGF V RI + VL+FATGSGISPIRSLIESGF E DV
Sbjct: 121 LRPGDLVHVGGSVVGRGFEVGRIADARD---VLVFATGSGISPIRSLIESGFGENENIDV 177
Query: 200 RLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQ 259
+L+YG RNL+RMAYQ++F WESSG+KI+PVLS+PD W+GE GYVQ AFSR KK+ NP
Sbjct: 178 KLFYGVRNLQRMAYQERFTNWESSGIKIIPVLSRPDDQWTGERGYVQNAFSRMKKVVNPS 237
Query: 260 GTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G +LCG KQM+EE+T ++A+GV ++IL NF
Sbjct: 238 SMGAILCGHKQMSEEITRALVADGVPKDRILTNF 271
>gi|242056659|ref|XP_002457475.1| hypothetical protein SORBIDRAFT_03g007860 [Sorghum bicolor]
gi|241929450|gb|EES02595.1| hypothetical protein SORBIDRAFT_03g007860 [Sorghum bicolor]
Length = 287
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/289 (50%), Positives = 190/289 (65%), Gaps = 23/289 (7%)
Query: 25 ILRRIPL-LHL-KPQRRRL-----ATLAAAAVRQDTTVWTPTPLAEISPAAE--SLFHVS 75
+LR P LHL +PQ RL + AA A Q T W PLA + PA SLFHVS
Sbjct: 2 LLRSAPRGLHLLRPQHLRLLSAAASASAAPAPPQLPTEWAEAPLACVRPATADASLFHVS 61
Query: 76 IDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIAS-------PPSFASASGA---FEF 125
+D+S ++ +SH AGQ+L R+ P FLAIAS P + + SG+ F+F
Sbjct: 62 LDLSAHGELLASHAAAGQFLPFRLPAAPYPIFLAIASPPPPPLTPEAGLAGSGSPSCFDF 121
Query: 126 LVKSVAGSTAEVLCGLKKGDVVEI-SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
LVK + G+ + LC L+ GD+V + + V+GRGF V RI + VL+FATGSGISPIR
Sbjct: 122 LVKRLPGTPSARLCDLRPGDLVHVGASVVGRGFDVARIADARD---VLVFATGSGISPIR 178
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGY 244
SLIESGF+ +++ V L+YG RNL+RMAYQ++F +WES GVKIVPVLS+PDG W+GE GY
Sbjct: 179 SLIESGFAENKKTGVNLFYGVRNLQRMAYQERFDDWESRGVKIVPVLSRPDGQWTGERGY 238
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VQ FSR K I NP G +LCG KQM EE+T +++A+G+S ++IL NF
Sbjct: 239 VQNVFSRMKNIVNPSSVGAILCGHKQMTEEITRVLVADGLSKDRILTNF 287
>gi|212275932|ref|NP_001130256.1| fruit protein PKIWI502 [Zea mays]
gi|194688680|gb|ACF78424.1| unknown [Zea mays]
gi|414875934|tpg|DAA53065.1| TPA: fruit protein PKIWI502 [Zea mays]
Length = 287
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 174/254 (68%), Gaps = 14/254 (5%)
Query: 51 QDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
Q W PLA + PA SLFHVS+D+S + +SHT AGQ+L+ R+ FL
Sbjct: 37 QSPIEWAEAPLASVRPATADASLFHVSLDLSAHRGLLASHTAAGQFLRFRLPASSYHIFL 96
Query: 109 AIASPP--------SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI-SQVMGRGFAV 159
AIASPP + A FEFLVK + G+ + LC L+ GD+V + + V+GRGF V
Sbjct: 97 AIASPPPPPALETLALAGPPSCFEFLVKRLPGTPSARLCDLRPGDLVHVGASVVGRGFDV 156
Query: 160 DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE 219
RI + VL+FATGSGISPIRSLIESGF+ +++DVRL+YG RNL+RMAYQ++F++
Sbjct: 157 ARISDARD---VLVFATGSGISPIRSLIESGFAENKKTDVRLFYGVRNLQRMAYQERFED 213
Query: 220 WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
WES GVKIVPVLS+PD W+GE GY+Q FSR K NP GV+LCG KQM+EE+T ++
Sbjct: 214 WESRGVKIVPVLSRPDSQWTGERGYIQNVFSRMKNTVNPPSVGVILCGHKQMSEEITRVL 273
Query: 280 LAEGVSSEKILKNF 293
+A+G+S ++IL NF
Sbjct: 274 VADGLSKDRILTNF 287
>gi|195643102|gb|ACG41019.1| fruit protein PKIWI502 [Zea mays]
Length = 287
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 174/254 (68%), Gaps = 14/254 (5%)
Query: 51 QDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
Q W PLA + PA SLFHVS+D+S + +SHT AGQ+L+ R+ FL
Sbjct: 37 QSPIEWAEAPLASVRPATADASLFHVSLDLSAHRGLLASHTAAGQFLRFRLPASSYHIFL 96
Query: 109 AIASPP--------SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI-SQVMGRGFAV 159
AIASPP + A FEFLVK + G+ + LC L+ GD+V + + V+GRGF V
Sbjct: 97 AIASPPPPPALETLALAGPPSCFEFLVKRLPGTPSARLCDLRPGDLVHVGASVVGRGFDV 156
Query: 160 DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE 219
RI + VL+FATGSGISPIRSLIESGF+ +++DVRL+YG RNL+RMAYQ++F++
Sbjct: 157 ARIS---DALDVLVFATGSGISPIRSLIESGFAENKKTDVRLFYGVRNLQRMAYQERFED 213
Query: 220 WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
WES GVKIVPVLS+PD W+GE GY+Q FSR K NP GV+LCG KQM+EE+T ++
Sbjct: 214 WESRGVKIVPVLSRPDSQWTGERGYIQNVFSRMKNTVNPPSXGVILCGHKQMSEEITRVL 273
Query: 280 LAEGVSSEKILKNF 293
+A+G+S ++IL NF
Sbjct: 274 VADGLSKDRILTNF 287
>gi|300681555|emb|CBH32653.1| Oxidoreductase NAD-binding domain containing protein, expressed
[Triticum aestivum]
Length = 279
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 172/246 (69%), Gaps = 9/246 (3%)
Query: 54 TVWTPTPLAEI--SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
T WT P+A + + A SLFHVS+D+S + +SH AGQ+L R+ P FLAI+
Sbjct: 37 TEWTEAPVASVRAATADASLFHVSLDLSAHGPLLASHVAAGQFLPFRLPSAPYPIFLAIS 96
Query: 112 SPPSFASASGA---FEFLVKSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDE 167
SPP +S+ F+FLVK + G+ + LC L+ GD+V + V+GRGF V RI +
Sbjct: 97 SPPPASSSGSPPKSFDFLVKRLPGTPSARLCDLRPGDLVPVGGSVVGRGFEVSRIADARD 156
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKI 227
VL+FATGSGISPIRSLIESGF E+ DV L+YG RNL+RMAYQ++F +WES G+KI
Sbjct: 157 ---VLVFATGSGISPIRSLIESGFGESEKIDVSLFYGVRNLQRMAYQERFSDWESRGIKI 213
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+PVLS+PD W+G+ GYVQ AFSRAKK+ NP TG +LCG KQM EE+T ++A+G+S +
Sbjct: 214 IPVLSRPDDQWTGQRGYVQNAFSRAKKVINPSSTGAILCGHKQMTEEITRALVADGMSKD 273
Query: 288 KILKNF 293
KIL NF
Sbjct: 274 KILTNF 279
>gi|297737736|emb|CBI26937.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/141 (80%), Positives = 131/141 (92%)
Query: 153 MGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMA 212
MGRGF +DRI PP++Y TVLIFATGSGISPIRSLIESGFS+ +RSDVRLYYGARNL+RMA
Sbjct: 1 MGRGFDIDRISPPEDYHTVLIFATGSGISPIRSLIESGFSADKRSDVRLYYGARNLQRMA 60
Query: 213 YQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMA 272
YQD+FK+WES+GVKIVPVLSQPD +W+GETGYVQAAF+RAKKI++PQ TG VLCGQ QM
Sbjct: 61 YQDRFKDWESTGVKIVPVLSQPDNSWTGETGYVQAAFARAKKIYSPQSTGAVLCGQGQMT 120
Query: 273 EEVTSIVLAEGVSSEKILKNF 293
EEVTSI++ +GVSSEKILKNF
Sbjct: 121 EEVTSILVTDGVSSEKILKNF 141
>gi|242056117|ref|XP_002457204.1| hypothetical protein SORBIDRAFT_03g003260 [Sorghum bicolor]
gi|241929179|gb|EES02324.1| hypothetical protein SORBIDRAFT_03g003260 [Sorghum bicolor]
Length = 283
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/254 (52%), Positives = 171/254 (67%), Gaps = 14/254 (5%)
Query: 51 QDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
Q T W PLA + PAA+ SLFHVS+D+S + +SH AGQ+L R+ P FL
Sbjct: 33 QAPTEWAEAPLASVHPAADDASLFHVSLDLSAHRGLLASHAAAGQFLPFRLPASPYPIFL 92
Query: 109 AIASPPSFASA--------SGAFEFLVKSVAGSTAEVLCGLKKGDVVEI-SQVMGRGFAV 159
AIASPP + FEFLVK + G+ + LC L GD+V + + V+G GF V
Sbjct: 93 AIASPPPPPQPAPEALAEPASCFEFLVKRLPGTPSARLCDLHPGDLVHVGASVVGGGFDV 152
Query: 160 DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE 219
RI + VL+FATGSGISPIRSLIESGF+ +++DV L+YG RNL+RMAYQ++F +
Sbjct: 153 ARIADASD---VLVFATGSGISPIRSLIESGFAENKKTDVSLFYGVRNLQRMAYQERFDD 209
Query: 220 WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
WES GVKIVPVLS+PDG W+GE GYVQ FSR K I NP G +LCG KQM EE+T ++
Sbjct: 210 WESRGVKIVPVLSRPDGQWTGERGYVQNVFSRMKNIVNPSSVGAILCGHKQMTEEITRVL 269
Query: 280 LAEGVSSEKILKNF 293
+A+G+S ++IL NF
Sbjct: 270 VADGLSKDRILTNF 283
>gi|326520680|dbj|BAJ92703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 173/246 (70%), Gaps = 9/246 (3%)
Query: 54 TVWTPTPLAEI--SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
T WT P+A + + A SLFHVS+D+S + +SH AGQ+L R+ P FLAI+
Sbjct: 59 TEWTEAPVASVRAATADASLFHVSLDLSAHGPLLASHVAAGQFLPFRLPSAPYPIFLAIS 118
Query: 112 SPPSFASASG---AFEFLVKSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDE 167
SPP +SA+ +F+FLVK + G+ + LC L+ GD+V + V+G+GF V RI
Sbjct: 119 SPPPASSAASPPRSFDFLVKRLPGTPSARLCDLRPGDLVPVGGSVVGQGFEVRRIAHARH 178
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKI 227
VL+FATGSGISPIRSLIESGF E+ DV L+YG RNL+RMAYQ++FK+WES G++I
Sbjct: 179 ---VLVFATGSGISPIRSLIESGFGESEKIDVSLFYGVRNLQRMAYQERFKDWESRGIQI 235
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+PVLS+PD W+G+ GYVQ AFSR KK+ NP TG +LCG KQM EE+T ++A+G+S +
Sbjct: 236 IPVLSRPDDQWTGQRGYVQNAFSREKKVINPSSTGAILCGHKQMTEEITRALVADGMSKD 295
Query: 288 KILKNF 293
KIL NF
Sbjct: 296 KILTNF 301
>gi|326494644|dbj|BAJ94441.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 172/246 (69%), Gaps = 9/246 (3%)
Query: 54 TVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
T WT P+A + A SLFHVS+D+S + +SH AGQ+L R+ P FLAI+
Sbjct: 59 TEWTEAPVASVRAATTDASLFHVSLDLSAHGPLLASHVAAGQFLPFRLPSAPYPIFLAIS 118
Query: 112 SPPSFASASG---AFEFLVKSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDE 167
SPP +SA+ +F+FLVK + G+ + LC L+ GD+V + V+G+GF V RI
Sbjct: 119 SPPPASSAASPPRSFDFLVKRLPGTPSARLCDLRPGDLVPVGGSVVGQGFEVRRIAHARH 178
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKI 227
VL+FATGSGISPIRSLIESGF E+ DV L+YG RNL+RMAYQ++FK+WES G++I
Sbjct: 179 ---VLVFATGSGISPIRSLIESGFGESEKIDVSLFYGVRNLQRMAYQERFKDWESRGIQI 235
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+PVLS+PD W+G+ GYVQ AFSR KK+ NP TG +LCG KQM EE+T ++A+G+S +
Sbjct: 236 IPVLSRPDDQWTGQRGYVQNAFSREKKVINPSSTGAILCGHKQMTEEITRALVADGMSKD 295
Query: 288 KILKNF 293
KIL NF
Sbjct: 296 KILTNF 301
>gi|357132189|ref|XP_003567714.1| PREDICTED: fruit protein pKIWI502-like [Brachypodium distachyon]
Length = 274
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 167/243 (68%), Gaps = 8/243 (3%)
Query: 54 TVWTPTPLAEISPAA--ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
T WT P++ + A SLFHVS+D+S + +SH AGQ+L R+ P FLAI+
Sbjct: 37 TEWTEAPVSRVRAATPDASLFHVSLDLSAHGSLLASHVAAGQFLPFRLPSAPYPIFLAIS 96
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDEYPT 170
S ASG+F+FLVK + G+ + LC L+ GD+V + V+GRGF V RI +
Sbjct: 97 S--PPPPASGSFDFLVKRLPGTPSARLCDLRPGDLVSVGGSVVGRGFEVGRIADARD--- 151
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPV 230
VL+FATGSGISPIRSLIESGF + DV L+YG RNL+RMAYQ++F +WES G+KI+PV
Sbjct: 152 VLVFATGSGISPIRSLIESGFGKNKEIDVSLFYGVRNLQRMAYQERFSDWESRGIKIIPV 211
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
LS+PD W+GE GYVQ AFSR KK+ +P G +LCG KQM+ E+T ++A+G++ +KIL
Sbjct: 212 LSRPDDQWTGERGYVQNAFSRMKKVVDPSSMGAILCGHKQMSAEITRALVADGMTKDKIL 271
Query: 291 KNF 293
NF
Sbjct: 272 TNF 274
>gi|383100776|emb|CCG48007.1| Oxidoreductase NAD-binding domain containing protein, expressed
[Triticum aestivum]
Length = 279
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 164/227 (72%), Gaps = 7/227 (3%)
Query: 71 LFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASG---AFEFLV 127
LFHVS+D+S + +SH AGQ+L R+ P FLAI+SPP +S++ +F+FLV
Sbjct: 56 LFHVSLDLSAHGPLLASHVAAGQFLPFRLPSAPYPIFLAISSPPPASSSASPPRSFDFLV 115
Query: 128 KSVAGSTAEVLCGLKKGDVVEIS-QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
K + G+++ LC L+ GD+V + V+GRGF V RI + VL+FATGSGISPIRSL
Sbjct: 116 KRLPGTSSARLCDLQPGDLVPVGGSVVGRGFEVTRIADARD---VLVFATGSGISPIRSL 172
Query: 187 IESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
IESGF E+ DV L+YG RNL+RMAYQ++F +WES G+KI+PVLS+PD W+G+ GYVQ
Sbjct: 173 IESGFGENEKIDVSLFYGVRNLQRMAYQERFSDWESRGIKIIPVLSRPDEQWTGQRGYVQ 232
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
AFSRAKK+ NP TG +LCG KQM EE+T ++A+G+ ++IL NF
Sbjct: 233 NAFSRAKKVINPSSTGAILCGHKQMTEEITRALVADGMPKDQILTNF 279
>gi|194708710|gb|ACF88439.1| unknown [Zea mays]
gi|414875933|tpg|DAA53064.1| TPA: hypothetical protein ZEAMMB73_876693 [Zea mays]
Length = 280
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 162/247 (65%), Gaps = 14/247 (5%)
Query: 51 QDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
Q W PLA + PA SLFHVS+D+S + +SHT AGQ+L+ R+ FL
Sbjct: 37 QSPIEWAEAPLASVRPATADASLFHVSLDLSAHRGLLASHTAAGQFLRFRLPASSYHIFL 96
Query: 109 AIASPP--------SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI-SQVMGRGFAV 159
AIASPP + A FEFLVK + G+ + LC L+ GD+V + + V+GRGF V
Sbjct: 97 AIASPPPPPALETLALAGPPSCFEFLVKRLPGTPSARLCDLRPGDLVHVGASVVGRGFDV 156
Query: 160 DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE 219
RI + VL+FATGSGISPIRSLIESGF+ +++DVRL+YG RNL+RMAYQ++F++
Sbjct: 157 ARISDARD---VLVFATGSGISPIRSLIESGFAENKKTDVRLFYGVRNLQRMAYQERFED 213
Query: 220 WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
WES GVKIVPVLS+PD W+GE GY+Q FSR K NP GV+LCG KQM+E + +
Sbjct: 214 WESRGVKIVPVLSRPDSQWTGERGYIQNVFSRMKNTVNPPSVGVILCGHKQMSEVCSFCL 273
Query: 280 LAEGVSS 286
+E S
Sbjct: 274 FSESFVS 280
>gi|222622743|gb|EEE56875.1| hypothetical protein OsJ_06514 [Oryza sativa Japonica Group]
Length = 241
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 8/186 (4%)
Query: 47 AAVRQDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRV--VDV 102
AAV+QD VWTP P++ PA SL H S+D+SDA D+A+S+T GQYL +RV D
Sbjct: 41 AAVQQDAAVWTPAPVSSFGPATADGSLVHFSVDLSDATDLAASYTTPGQYLLIRVPGEDE 100
Query: 103 GKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRI 162
KP F+AIASPP A AFEFLVK+V G+TAE LCGL+ GDV+E+ +MG GF + RI
Sbjct: 101 LKPAFMAIASPPGGA----AFEFLVKTVPGTTAEKLCGLRDGDVLELGAIMGNGFPISRI 156
Query: 163 QPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES 222
PPDE TVL+FATG+GISP+RSLIE GF++ +R+DVRLYYGARNL+ MAYQD+F WES
Sbjct: 157 NPPDEAQTVLLFATGTGISPVRSLIEFGFAADQRADVRLYYGARNLQTMAYQDRFTNWES 216
Query: 223 SGVKIV 228
+G+KI+
Sbjct: 217 TGLKII 222
>gi|224035923|gb|ACN37037.1| unknown [Zea mays]
gi|413936949|gb|AFW71500.1| hypothetical protein ZEAMMB73_758822 [Zea mays]
Length = 183
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 138/186 (74%), Gaps = 3/186 (1%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ I+SPP A FEFLVKSV G+TA LC L+ GDVVE+ V G+GF +DRI PPD
Sbjct: 1 MVISSPPK---AGPRFEFLVKSVPGATAGRLCALRDGDVVELGAVTGKGFPLDRINPPDV 57
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKI 227
TVLIFA G+GIS IRSLIE GF++KER+DVRLYYG +LK M+YQ++ WES+G+KI
Sbjct: 58 AQTVLIFAAGTGISAIRSLIEFGFAAKERADVRLYYGDTSLKSMSYQERLSNWESTGIKI 117
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+PVLSQPD +W GE GYVQ AF R K I NP TG +LCG +M EE+T ++A+GVS +
Sbjct: 118 IPVLSQPDDSWKGERGYVQDAFFRNKNIVNPSSTGAILCGPNEMQEELTLSLVADGVSRD 177
Query: 288 KILKNF 293
KIL N+
Sbjct: 178 KILTNY 183
>gi|326522216|dbj|BAK04236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 161/252 (63%), Gaps = 21/252 (8%)
Query: 47 AAVRQDTTVWTPTPLAEISPAAE--SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDV-- 102
A+R+D+ WT P++ I+PA + S+F +++D+S APD+ +++T GQY+ R+ +
Sbjct: 64 GALRRDS--WTCVPISAITPATQDQSIFLITLDLSGAPDLVATYTTPGQYVLTRIPSLLG 121
Query: 103 -GKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDR 161
P F+ I+SPP + F+ LV+SV +T+E+LC L GDVVEI V G GFA+
Sbjct: 122 GPPPAFMCISSPPH---SGLQFDLLVRSVPHTTSELLCKLHVGDVVEIGPVKGTGFAIQN 178
Query: 162 IQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWE 221
I PP++ TVL+FA GISPIR+LIESGFS+ +R+DVRLYY A++++ M YQ++FK+WE
Sbjct: 179 INPPEDTETVLLFAAAEGISPIRALIESGFSASQRADVRLYYAAKDMQSMPYQERFKKWE 238
Query: 222 SSGVKIVPVLSQPDGNWSGETGYVQAAF---SRAKKIFNPQGTGVVLCGQKQMAEEVTSI 278
+GVK+VP+ + + +Q F + I NP TG V+ G + E +T +
Sbjct: 239 ETGVKVVPLTLKKEN--------IQEPFLEHTLNGIIGNPLSTGAVIVGPLILKEVITGV 290
Query: 279 VLAEGVSSEKIL 290
+L GV EKIL
Sbjct: 291 LLDHGVPQEKIL 302
>gi|307110036|gb|EFN58273.1| hypothetical protein CHLNCDRAFT_30113 [Chlorella variabilis]
Length = 296
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 142/227 (62%), Gaps = 12/227 (5%)
Query: 68 AESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV 127
AE L + + I + AS++T+AGQ++Q + + GK F AIAS P +G E LV
Sbjct: 81 AEKLQRLKVQIGGS---ASAYTKAGQFIQAKFGEEGKAGFFAIASAPGADKENGVVELLV 137
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
K G TAE LC + G + +S MG+GF VD I PP ++PTVLIFATGSGISPI++LI
Sbjct: 138 KD-QGGTAEQLCAAEAGTSLLVSAPMGKGFPVDTI-PPQQFPTVLIFATGSGISPIKALI 195
Query: 188 ESG-FSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
ESG + ER DVRLYYG R+ + +A+ WE++GVK+VPVLS+ GYVQ
Sbjct: 196 ESGALQAAERKDVRLYYGVRSQEHLAFAADIPRWEAAGVKVVPVLSETG------AGYVQ 249
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
AF++ I + G VLCGQK MA VT ++ +GV+ E IL NF
Sbjct: 250 DAFAKEDGIADWSGVAAVLCGQKDMATAVTELLTGKGVAKEYILTNF 296
>gi|384251849|gb|EIE25326.1| ferredoxin reductase-like protein [Coccomyxa subellipsoidea C-169]
Length = 300
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 150/239 (62%), Gaps = 16/239 (6%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W+ + E S AAE L +++DI +A +T+ GQYLQL+V D KP + AIAS PS
Sbjct: 77 WSRGTIVETSKAAEGLVRLTVDIGQ---LAKGYTKGGQYLQLKVGD-SKPGYFAIASAPS 132
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
E LVK+ GSTAE+LC K GD V++S VMG+GF++DR P++ P + IFA
Sbjct: 133 ---PERPIELLVKN-QGSTAEILCDSKPGDEVDVSPVMGKGFSLDRA-APEQAPDLFIFA 187
Query: 176 TGSGISPIRSLIESG-FSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQP 234
TG+GISP+++LIESG + +R VRLYYG N AY++ F +WE +GVK++ V S
Sbjct: 188 TGTGISPVKALIESGELQTDKRKSVRLYYGTFNPDSTAYRELFAQWEETGVKVINVYSGF 247
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
GYVQ F + + + + T V+LCGQK+MAE +T+IV +GV + IL NF
Sbjct: 248 G------DGYVQHVFEKDGGVSDGEHTAVILCGQKEMAEAITAIVEKKGVKKDFILTNF 300
>gi|219127002|ref|XP_002183734.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404971|gb|EEC44916.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 249
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 150/249 (60%), Gaps = 17/249 (6%)
Query: 55 VWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPP 114
+W+P+ + S A ES V++++S P+ AS + GQY+Q+R+ D KP FLAIAS P
Sbjct: 8 IWSPSKVTTNSKACESGNSVTLNVSVQPETASEYKLPGQYVQVRLDDSTKPLFLAIASAP 67
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFA----VDRIQPPDEYPT 170
+AS FEFLVK G+ + L + G VE+SQV+G G++ +D ++ ++PT
Sbjct: 68 DAENAS--FEFLVKKTEGN--DWLTSIAPGTAVEVSQVLGNGYSIAENIDSLKY--DFPT 121
Query: 171 --VLIFATGSGISPIRSLIESG---FSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGV 225
+L+FA GSG++PI++ +ESG S RLYYG R + + Y DK+ EWE++G
Sbjct: 122 QNILLFAAGSGLAPIKAALESGQLKVGSDSSRQARLYYGERTAEDLCYVDKYSEWEAAGF 181
Query: 226 KIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
++VPVLSQPD + W G TGY+Q A + P+ +G +LCG K M E V + GV
Sbjct: 182 EVVPVLSQPDESVWKGRTGYIQTALEE-DGVDIPRNSGALLCGMKGMTEAVKDFLTKAGV 240
Query: 285 SSEKILKNF 293
++L NF
Sbjct: 241 FEGRVLFNF 249
>gi|159484630|ref|XP_001700357.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272398|gb|EDO98199.1| predicted protein [Chlamydomonas reinhardtii]
Length = 321
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 144/243 (59%), Gaps = 17/243 (6%)
Query: 56 WTPTPLAEISPAAESLFH-VSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPP 114
+ P + SPAA H V ID+ AP +A+ +T GQ++Q++V D KP F AIAS P
Sbjct: 91 FQPAKVVSNSPAAAGPLHKVVIDV-GAP-LAAGYTVPGQFVQVKVGD-SKPGFFAIASAP 147
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
+ SG EFL+K GSTAE+LC GD V +S VMG+GFA+DR+ P VL+F
Sbjct: 148 GAHAGSGQLEFLIKGAPGSTAELLCNASAGDPVSVSPVMGKGFALDRL-PASTTRAVLLF 206
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQP 234
ATGSGISP+R++I+SG + DV LYYG RN + AY + +W ++GVK+V V S+
Sbjct: 207 ATGSGISPLRAVIDSGALAGR--DVTLYYGTRNPESTAYSELLPQWTAAGVKVVSVYSE- 263
Query: 235 DGNWSGETGYVQAAFSRAKKIFNP----QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ GYV F R P G +LCG K M + VT+++ A+GV EKIL
Sbjct: 264 -----SKQGYVHDVFEREGLAALPADAASSVGAMLCGHKGMCQAVTALLTAKGVPPEKIL 318
Query: 291 KNF 293
NF
Sbjct: 319 LNF 321
>gi|449015612|dbj|BAM79014.1| similar to Na+-translocating NADH:quinone oxidoreductase, subunit
Nqr6 [Cyanidioschyzon merolae strain 10D]
Length = 420
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 24 SILRRIPLLHLKPQR--RRLATL------AAAAVRQDTT--VWTPTPLAEISPAAESLFH 73
S+ R ++ L P+ R+L T+ A A Q T +W + P AE LF
Sbjct: 143 SMQRNAKIMFLGPRTPFRKLTTVGVVLLKATAPTEQKETQPLWYTGVIRRNRPEAEDLFL 202
Query: 74 VSIDISDAPDIASSHTRAGQYLQLRVVDV-GKPTFLAIASPPSFA-SASGAFEFLVKSVA 131
+ + +I +S+ GQY+ LR + KP F +I SPP A+ E LVK V
Sbjct: 203 LECVVPQ--EIVTSYHVPGQYVMLRRDSMQAKPGFFSITSPPHHHPDAADCIELLVKQV- 259
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
LC L G VE++ G GFA+ R D VL+FATGSGI+PIR+++E
Sbjct: 260 -DRTRWLCALTPGSSVEVTVAQGSGFAL-RSDTRDAIRHVLLFATGSGIAPIRAVLEDDR 317
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFS 250
V+LYYG RNL RMAYQ++F +W+ GV++VPVLSQPD +W+GE GYVQ A
Sbjct: 318 FLAHMDSVKLYYGCRNLHRMAYQERFAQWQQERGVQVVPVLSQPDTSWTGERGYVQHALE 377
Query: 251 RAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
R P+ T V LCG M V + +L +G+ + IL NF
Sbjct: 378 RDGVQTPPEQTLVFLCGLPGMTSAVEAYLLKQGLKKQHILYNF 420
>gi|298710671|emb|CBJ32096.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 316
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 147/254 (57%), Gaps = 20/254 (7%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
D V++ + E AE + ++ID A DIA +T GQY+Q++V KP F AIA
Sbjct: 71 DDVVFSKAKVVETGKIAEGQYALTID---AGDIAKEYTAPGQYVQIKVTSSAKPGFFAIA 127
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP-- 169
SPP ++SG+ EFL+K + A L G+K G VE+S VMG+GF + +Y
Sbjct: 128 SPPD--ASSGSLEFLIKENDATKA--LVGVKAGGSVEVSTVMGKGFPIKENFTGYKYDFP 183
Query: 170 --TVLIFATGSGISPIRSLIESGFSSKERSD--------VRLYYGARNLKRMAYQDKFKE 219
V++ A+G+GI+P R+ IESG +D +LY+G R+ + M ++D+ +
Sbjct: 184 VQNVVLSASGTGIAPFRAAIESGALELPDADDDGVFGRSCKLYWGCRDEESMPWKDRVEA 243
Query: 220 WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
W+ GV++V VLSQP +W+G TG+VQ A + + I P+ + V++CG K+MAEEV I
Sbjct: 244 WDKRGVEVVVVLSQPSESWTGRTGFVQQAI-KEEGIPLPRNSAVLVCGHKEMAEEVKEIA 302
Query: 280 LAEGVSSEKILKNF 293
GV ++L NF
Sbjct: 303 EKAGVLDGRVLSNF 316
>gi|302844548|ref|XP_002953814.1| hypothetical protein VOLCADRAFT_106094 [Volvox carteri f.
nagariensis]
gi|300260922|gb|EFJ45138.1| hypothetical protein VOLCADRAFT_106094 [Volvox carteri f.
nagariensis]
Length = 1007
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 137/237 (57%), Gaps = 18/237 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
++ S AA L + ID+ +A+ + GQ++Q++V D KP F AIAS P A +
Sbjct: 785 VSNTSAAAGPLHKLVIDVGP---LAAGYAVPGQFIQIKVGD-SKPGFFAIASAPG-AHSD 839
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
G EFL+K G+TAE+LC G V +S VMG+GF +DR+ P VL+FATGSGI
Sbjct: 840 GLLEFLIKGAPGTTAELLCNAGDGTEVAVSPVMGKGFPLDRL-PASNTTAVLMFATGSGI 898
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSG 240
SPIR++I+SG + D+ LYYG RN AY++ +W++ GVK+V V S+
Sbjct: 899 SPIRAVIDSG--TLAGRDITLYYGTRNTDSTAYRELLPDWQAKGVKVVQVFSE------S 950
Query: 241 ETGYVQAAFSRAKKIFNP----QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
+ GYV F R P G +LCG K M + +TS++ A+GV EKIL NF
Sbjct: 951 KQGYVHDVFEREGLSKLPADAASAVGALLCGHKGMCQAITSLLTAKGVPPEKILLNF 1007
>gi|405371326|ref|ZP_11026980.1| Heterodisulfide reductase, cytochrome reductase subunit
[Chondromyces apiculatus DSM 436]
gi|397088928|gb|EJJ19877.1| Heterodisulfide reductase, cytochrome reductase subunit [Myxococcus
sp. (contaminant ex DSM 436)]
Length = 231
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 137/242 (56%), Gaps = 18/242 (7%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W P + E +PAA+ L + +D+ P +A +H R GQY+ LR+ VG+ F AIASPP
Sbjct: 4 WHPATVTESAPAADGLTDLVLDVRGTP-LAGTHERPGQYVHLRLPGVGQGLF-AIASPPG 61
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+EFL+K V + L GL KG VE+S+ GRGF ++R + D VL+FA
Sbjct: 62 PQGTH--WEFLLK-VGSPLPDALIGLPKGARVEVSRPEGRGFPMERARGQD----VLLFA 114
Query: 176 TGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
TGSGIS IRS+I S +ER D V LY+GAR AY D+ +EWE+ GV++V +S
Sbjct: 115 TGSGISAIRSVITS--IQRERGDYGEVTLYFGARTPGAFAYGDELQEWEAGGVRVVRTVS 172
Query: 233 QPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
QP + W G TGYVQA P LCGQK+M + V + A G+ + I
Sbjct: 173 QPGASGWQGLTGYVQAHLGEGP--LRPSAV-AFLCGQKEMVQGVMKTLQALGMPTSDIHL 229
Query: 292 NF 293
N+
Sbjct: 230 NY 231
>gi|255082352|ref|XP_002504162.1| predicted protein [Micromonas sp. RCC299]
gi|226519430|gb|ACO65420.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + PAA SI + ++A + + GQ+ QLR D GKP F+AIASPP
Sbjct: 71 WGSGSVVTNEPAAPDGGLRSIVLKVDGEMAKGYAKPGQFCQLRAADDGKPAFIAIASPPD 130
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+ +G FE LVK G+ E+ C + GDVV++S MG GF +D+ P E P L+FA
Sbjct: 131 --ADAGTFELLVKRSDGTAGEI-CDMSPGDVVQMSPPMGPGFDMDK-APASECPNALLFA 186
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPD 235
TGSGISPIR+LI SG +V LYYG + A+ D+F++WE+ GV++ V S+
Sbjct: 187 TGSGISPIRALIRSGVLVGR--NVTLYYGTASPTYTAFMDEFEDWEARGVRVRHVQSR-- 242
Query: 236 GNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G YVQ A + + T VL GQK+M V ++ GV+ E+ + NF
Sbjct: 243 --VGGPPTYVQDALKEDAENIDGASTCAVLVGQKEMTTAVIEVLEGAGVAKERCIMNF 298
>gi|428168817|gb|EKX37757.1| hypothetical protein GUITHDRAFT_116064 [Guillardia theta CCMP2712]
Length = 290
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 149/300 (49%), Gaps = 38/300 (12%)
Query: 1 MALALSPSPSLPHAHVSQTFPPMSILRRIPLLHLKPQRRRLA---TLAAAAVRQDTTVWT 57
+A +L P+L V + F ++R P +R R+ + A +
Sbjct: 22 LAFSLQAQPTLFRHGVRRAF----VVRSPPAFRCHTKRTRIGQQKSCPALVYMNAKDEFI 77
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRV-VDVGKPTFLAIASPPSF 116
P + AA L+ + + + P + +S+ GQYL++R + KP F AIASPP
Sbjct: 78 PATVVSNEEAASGLYKIMLQVD--PAVCTSYKIPGQYLKVRKDSSMEKPGFFAIASPPK- 134
Query: 117 ASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
+ S EFL+K ++ G + V + QV L+FAT
Sbjct: 135 -ADSNVLEFLIKKRLDGRSDFRAGTRYAGVDNVKQV-------------------LMFAT 174
Query: 177 GSGISPIRSLIESG-FSSKERSDVRLYYGARNLKR--MAYQDKFKEWESSGVKIVPVLSQ 233
GSGISP+++ IES SSK +V+LYYGAR+ + MAY DKF +WE GV+++P LS+
Sbjct: 175 GSGISPLKAAIESQELSSK---NVKLYYGARSAGKNSMAYMDKFADWEKMGVEVIPTLSK 231
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
P W G TGYVQ +A + +PQ T +LCG K M +EV +++ GV IL NF
Sbjct: 232 PGDKWDGRTGYVQEV-CKADGVKDPQSTVALLCGVKGMVDEVKTVLKDAGVPESNILLNF 290
>gi|338530671|ref|YP_004664005.1| NAD-binding oxidoreductase [Myxococcus fulvus HW-1]
gi|337256767|gb|AEI62927.1| NAD-binding oxidoreductase [Myxococcus fulvus HW-1]
Length = 230
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 138/244 (56%), Gaps = 23/244 (9%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W P +A+ +PAA+ L + +++ P +A +H R GQY+ LR+ VG+ F AIASPP
Sbjct: 4 WHPATVADTAPAADGLTDLVLEVRGTP-LAGTHERPGQYVHLRLPGVGEGLF-AIASPPG 61
Query: 116 FASASGAFEFLVKSVAGS-TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
+EFL+K AGS + L L +G V++S+ GRGF ++R + D VL+F
Sbjct: 62 GPGTQ--WEFLLK--AGSPLPDALIHLPRGAHVDVSRPEGRGFPLERARGQD----VLLF 113
Query: 175 ATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVL 231
ATGSGIS IRS+I S +ER V LY+GAR AY D+ EWE+ GV++V +
Sbjct: 114 ATGSGISAIRSVITS--IQRERGAYGLVTLYFGARTPGAFAYADELHEWEAGGVRVVRTV 171
Query: 232 SQPD-GNWSGETGYVQAAFSRAKKIFNPQGTGVV-LCGQKQMAEEVTSIVLAEGVSSEKI 289
SQP W G TGYVQA P T V LCGQK+M V S + A G+ + I
Sbjct: 172 SQPGVSGWQGLTGYVQAHLGE-----GPVQTAVAFLCGQKEMVRGVMSTLQARGMPAGDI 226
Query: 290 LKNF 293
NF
Sbjct: 227 HLNF 230
>gi|452820638|gb|EME27678.1| oxidoreductase NAD-binding domain-containing protein isoform 1
[Galdieria sulphuraria]
Length = 306
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 132/233 (56%), Gaps = 14/233 (6%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I ES H ++ + + +T G +++L KP F A+AS A S
Sbjct: 85 IHNVYESEGHRTLCLEPPSIVLEQYTNPGMFVKLSN-GKEKPNFFAVAS----AVNSPFL 139
Query: 124 EFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPI 183
EFLVK STA LC L+KG + IS VMG+GF + R+ + + + ATGSGISP+
Sbjct: 140 EFLVKRTH-STA-WLCELEKGGQIFISSVMGKGFQLSRLHDVEH---IYLLATGSGISPL 194
Query: 184 RSLIESG--FSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS-QPDGNWSG 240
++++ES + D++LYYG R +R +YQ++F W+ +G++I + S G W+G
Sbjct: 195 KAVMESTEFLQLSNKKDLQLYYGVRTPERFSYQNRFSVWQQTGIRIHKICSTDASGRWTG 254
Query: 241 ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
GY+Q + R I NP+ TG +LCG K M EEVT ++ +GV S+KIL NF
Sbjct: 255 RVGYIQH-WLRKDGIPNPEKTGALLCGVKGMIEEVTQLLQTQGVPSDKILTNF 306
>gi|452820637|gb|EME27677.1| oxidoreductase NAD-binding domain-containing protein isoform 2
[Galdieria sulphuraria]
Length = 289
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 132/233 (56%), Gaps = 14/233 (6%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I ES H ++ + + +T G +++L KP F A+AS A S
Sbjct: 68 IHNVYESEGHRTLCLEPPSIVLEQYTNPGMFVKLSN-GKEKPNFFAVAS----AVNSPFL 122
Query: 124 EFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPI 183
EFLVK STA LC L+KG + IS VMG+GF + R+ + + + ATGSGISP+
Sbjct: 123 EFLVKRTH-STA-WLCELEKGGQIFISSVMGKGFQLSRLHDVEH---IYLLATGSGISPL 177
Query: 184 RSLIESG--FSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS-QPDGNWSG 240
++++ES + D++LYYG R +R +YQ++F W+ +G++I + S G W+G
Sbjct: 178 KAVMESTEFLQLSNKKDLQLYYGVRTPERFSYQNRFSVWQQTGIRIHKICSTDASGRWTG 237
Query: 241 ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
GY+Q + R I NP+ TG +LCG K M EEVT ++ +GV S+KIL NF
Sbjct: 238 RVGYIQH-WLRKDGIPNPEKTGALLCGVKGMIEEVTQLLQTQGVPSDKILTNF 289
>gi|115371975|ref|ZP_01459287.1| hypothetical protein STIAU_5643 [Stigmatella aurantiaca DW4/3-1]
gi|310824752|ref|YP_003957110.1| oxidoreductase nad-binding protein [Stigmatella aurantiaca DW4/3-1]
gi|115370940|gb|EAU69863.1| hypothetical protein STIAU_5643 [Stigmatella aurantiaca DW4/3-1]
gi|309397824|gb|ADO75283.1| Oxidoreductase, NAD-binding protein [Stigmatella aurantiaca
DW4/3-1]
Length = 230
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 135/239 (56%), Gaps = 15/239 (6%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W P L S AA+ L +++D+S P +A +H R GQY +R+ + F AIASPP
Sbjct: 4 WYPATLVARSLAADGLTDLTLDVSLTP-VAHAHQRPGQYAWVRLPGYEEGVF-AIASPPG 61
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
G ++ LVK E L L G +E+++ GRGF +D+++ D +L+FA
Sbjct: 62 I---PGRWDLLVKE-GSPLPEALVQLPLGARMEVTRPEGRGFPLDQVKGRD----LLLFA 113
Query: 176 TGSGISPIRSLIESGFSSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQP 234
TGSGIS IRS+IES ++ V LY+G R AY F+ WE + +++V +SQP
Sbjct: 114 TGSGISAIRSVIESLRRDRDAYGRVTLYFGVRTPSAFAYARDFQSWEQARIRVVATVSQP 173
Query: 235 DGN-WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ W G TGYVQA A++ P GT LCGQK MA++V +LA G+S+ I +N
Sbjct: 174 GASGWQGLTGYVQAHL--AEEALAP-GTAAFLCGQKDMAQKVIETLLARGLSAADIHQN 229
>gi|303281808|ref|XP_003060196.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458851|gb|EEH56148.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 129/236 (54%), Gaps = 21/236 (8%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA-----FEFLVKS 129
SI IS +A + GQ++Q+R + GKP FLAIAS P+ S+S + LVKS
Sbjct: 94 SIVISVDASVAEGYVTPGQFVQMRTSEDGKPAFLAIASAPADVSSSSSAKTNELSLLVKS 153
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
G+ E+ C L+ G V +S MG GF V + P D YPT L+FATGSGISPIR+LI S
Sbjct: 154 SDGTAGEI-CALEAGAEVGVSPAMGSGFDVSK-APADAYPTTLLFATGSGISPIRALITS 211
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVP-VLSQPDG-NWS------- 239
G + K R DV LYYG + + A+ D+F+ W ++ GV+ V V SQ +WS
Sbjct: 212 G-ALKGR-DVTLYYGTASGETTAFLDEFETWKKACGVREVKHVQSQARSIHWSPYDRVGV 269
Query: 240 --GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G YVQ + + VLCGQK+M E V ++ GV E+ + NF
Sbjct: 270 VGGPPTYVQDQLKADLENVDGGKACAVLCGQKEMTEAVIEVLEGAGVPKERCIMNF 325
>gi|444913799|ref|ZP_21233946.1| Heterodisulfide reductase, cytochrome reductase subunit
[Cystobacter fuscus DSM 2262]
gi|444715357|gb|ELW56226.1| Heterodisulfide reductase, cytochrome reductase subunit
[Cystobacter fuscus DSM 2262]
Length = 230
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 133/242 (54%), Gaps = 19/242 (7%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W PT +A + PAAE L + +DIS P + H GQ+++L + +VG+ F AIAS P
Sbjct: 4 WHPTTVAAVLPAAEDLTELVLDISGTP-LVGHHRMPGQFVRLSLPEVGESMF-AIASAPE 61
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+ +EFL+K + +E L L+ G V Q G+GF + P +L+FA
Sbjct: 62 PSGTR--WEFLLKG-SSLLSERLIALEPGARVYSKQPEGQGFPL----PLARGRGLLLFA 114
Query: 176 TGSGISPIRSLIESGFSSKERS---DVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
GSGISPIRS+IES +ER V LY+GAR + AY+D+ + WE +G+++V +S
Sbjct: 115 VGSGISPIRSVIES--IRRERGAYGQVTLYFGARTPRAFAYEDELRHWEEAGIRVVRTVS 172
Query: 233 QP-DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
QP D +W G TGYVQA + + T LCGQ M + V + A G+ E +
Sbjct: 173 QPGDSDWQGLTGYVQAHLNEEPV----ENTVAFLCGQSSMVKGVIEALCARGLPREAVHL 228
Query: 292 NF 293
N+
Sbjct: 229 NY 230
>gi|108763602|ref|YP_629019.1| NAD-binding oxidoreductase [Myxococcus xanthus DK 1622]
gi|108467482|gb|ABF92667.1| oxidoreductase, NAD-binding [Myxococcus xanthus DK 1622]
Length = 208
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 121/220 (55%), Gaps = 15/220 (6%)
Query: 76 IDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA 135
+D+ P +A +H R GQY+ LR+ VG+ F AIASPP +EFL+K V
Sbjct: 2 LDVQGTP-LAGTHERPGQYVHLRLPGVGQGLF-AIASPPGRPGTQ--WEFLLK-VGSPLP 56
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSK 194
+ L L +G V++S+ GRGF ++R + D VL+FATGSGIS IRS+I S
Sbjct: 57 DALIHLPRGAHVDVSRPEGRGFPLERARGQD----VLLFATGSGISAIRSVITSIQLERG 112
Query: 195 ERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN-WSGETGYVQAAFSRAK 253
V LY+GAR AY D+ EWE+ GV++V +SQP + W G TGYVQA +
Sbjct: 113 AYGQVTLYFGARTPGAFAYTDELHEWEAGGVRVVRTVSQPGASGWQGLTGYVQAHLAEEP 172
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
Q LCGQK+M V + + A G+ + I NF
Sbjct: 173 V----QAAVAFLCGQKEMVRGVMTTLQARGMPAGDIHLNF 208
>gi|224001646|ref|XP_002290495.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973917|gb|EED92247.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 351
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 126/246 (51%), Gaps = 52/246 (21%)
Query: 92 GQYLQLRVVD--VGKPTFLAIASPPSFA---------------SASG-------AFEFLV 127
GQY+Q+R D KP FLAIAS P+ +A+G +EFL+
Sbjct: 114 GQYVQVRPADDENAKPIFLAIASAPTGTPPKRTVPGKKTSEADAAAGPEPPVPATWEFLI 173
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEY--PT--VLIFATGSGISPI 183
K + + G V ISQVMG GF VD +Y PT +L+FATGSGI+PI
Sbjct: 174 KKT--DNNDWITSATSGSTVAISQVMGGGFPVDENIEGFKYDFPTQNLLLFATGSGIAPI 231
Query: 184 RSLIESGFSSKERSDV----------RLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQ 233
RS IES +R ++ LYYGAR ++Y KF EWE GV++VPV+SQ
Sbjct: 232 RSAIES-----KRLNIAPPGGGGRTCTLYYGARTPDDLSYVSKFPEWEELGVQVVPVISQ 286
Query: 234 PD------GNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
PD W G TGYVQ A + P+ +G +LCG K M E V S+++ GV
Sbjct: 287 PDLPNVSGAVWQGRTGYVQNALEE-DGVAIPRNSGALLCGVKGMCEGVKSMLMESGVFEG 345
Query: 288 KILKNF 293
++L NF
Sbjct: 346 RVLTNF 351
>gi|397591722|gb|EJK55457.1| hypothetical protein THAOC_24814, partial [Thalassiosira oceanica]
Length = 229
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 114/203 (56%), Gaps = 15/203 (7%)
Query: 103 GKPTFLAIASPPSFASASGA-FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDR 161
GK A A P+F SA A +EFL+K G+ + + G V++SQVMG GF +
Sbjct: 30 GKKKADAEAEEPAFPSAEPATWEFLIKRTDGNG--WITDAQAGSTVDVSQVMGGGFPMRE 87
Query: 162 IQPPDEY--PT--VLIFATGSGISPIRSLIESG-FSSKERSDVRLYYGARNLKRMAYQDK 216
+Y PT VL+FATGSGI+PI+S IESG + LYYG R M Y +
Sbjct: 88 NLEGFKYDFPTQNVLLFATGSGIAPIKSAIESGQLNISGGRTCTLYYGVRTPDDMPYVAR 147
Query: 217 FKEWESSGVKIVPVLSQPDGN------WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQ 270
F +WE +GV++VPV+S+PD W G TGYVQ A + P+ +G +LCG K
Sbjct: 148 FGDWEDAGVQVVPVVSRPDAPCESGAVWKGRTGYVQNALEE-DGVAIPRNSGALLCGVKG 206
Query: 271 MAEEVTSIVLAEGVSSEKILKNF 293
MAE VTS++ GV ++L NF
Sbjct: 207 MAESVTSMLTQSGVFEGRVLTNF 229
>gi|145342533|ref|XP_001416236.1| oxidoreductase of unknown specificity [Ostreococcus lucimarinus
CCE9901]
gi|144576461|gb|ABO94529.1| oxidoreductase of unknown specificity [Ostreococcus lucimarinus
CCE9901]
Length = 264
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 112/205 (54%), Gaps = 15/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPS-FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
GQ+LQ+R + GK F+AIAS P A GA E LVK+ +G+TA +C L G VE+S
Sbjct: 72 GQFLQIRTREDGKAAFIAIASAPGECAFGEGAVELLVKAQSGATAGEICALDVGAEVEVS 131
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
VMG+GF + ++ + ++FATGSGISPIR+L+ SG + LYYG R+ +
Sbjct: 132 PVMGKGFDLTAVRGRSK---AVLFATGSGISPIRALLRSGTLKTDAGATTLYYGTRDAEA 188
Query: 211 MAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSR--AKKIFNPQGTGVVLCGQ 268
A+ ++ W +V V S+ G +VQ A + T VLCGQ
Sbjct: 189 TAFLEESASWP---CDVVRVYSEDSGK------HVQDVLREDIASGKIDANDTFAVLCGQ 239
Query: 269 KQMAEEVTSIVLAEGVSSEKILKNF 293
K+MA+EV ++ + G+ E + NF
Sbjct: 240 KEMADEVIEMLTSAGLPREACVMNF 264
>gi|412987883|emb|CCO19279.1| predicted protein [Bathycoccus prasinos]
Length = 320
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 124/246 (50%), Gaps = 31/246 (12%)
Query: 67 AAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL 126
A L+ +SI ++ + GQY+Q++V+ KP F+A+A+ P A + +FEFL
Sbjct: 87 AKGDLYALSIGGGHLDEMMEKFSTPGQYVQMKVLPSDKPAFIAVANGPKMAKKTNSFEFL 146
Query: 127 VK------------SVAGSTAEVLCGLKKGDV-VEISQVMGRGFAVDRIQPPDEYPTVLI 173
VK V STA+ +C L + V +S MG+GF + P DE VL
Sbjct: 147 VKRPSEGYADKDTGEVLQSTAQKVCDLDSEEASVLVSAPMGKGFRL----PEDEIGDVLC 202
Query: 174 FATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
FA GSGISP++S + E GF+ + ++YG R+ A+ ++ K KIV S
Sbjct: 203 FAAGSGISPVKSFLEEEGFT--HNGETYVFYGTRDAAHTAFAEELKTTMGGRAKIVNAYS 260
Query: 233 QPDGNWSGETGYVQAAFSR-----AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
DGN GY Q F R K+ +P+ VLCGQK+M E+ ++ GV E
Sbjct: 261 -ADGN-----GYAQDYFKRMIDSGELKLKDPKKAIAVLCGQKEMTEQTIEMLENAGVPRE 314
Query: 288 KILKNF 293
+IL NF
Sbjct: 315 RILMNF 320
>gi|323450010|gb|EGB05894.1| hypothetical protein AURANDRAFT_30245 [Aureococcus anophagefferens]
Length = 252
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 125/255 (49%), Gaps = 20/255 (7%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
D VW+ + A + L +++++S P+ +H GQY+QL + + KP F AIA
Sbjct: 5 DPPVWSDAVVKSNDEAGDGLRAIALEVS--PETLEAHRIGGQYVQLTLGEE-KPGFYAIA 61
Query: 112 SPPSFASASG-AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDR-IQPPD--- 166
SPP G AFEFL+K G+ L L G V+ S+V G G+AV + D
Sbjct: 62 SPPVVGPTEGKAFEFLIKENEGNA--YLTSLAAGAAVKCSEVSGGGYAVGKAFNGEDGAV 119
Query: 167 --EYPTV-----LIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE 219
EY L A GSGI+PIRS IESG + LYYG ++ MAY DKF
Sbjct: 120 DSEYDGFACMNQLFVAGGSGIAPIRSTIESGVALDLPKPATLYYGVQDASVMAYADKFDL 179
Query: 220 WESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSI 278
W S V + P S+ + +GYVQA A I P+ TG +CG K M V +
Sbjct: 180 WRSEFNVDVKPCHSKA-ASGGAFSGYVQACM-EADGIAVPRNTGACVCGPKDMFVAVKEL 237
Query: 279 VLAEGVSSEKILKNF 293
+ GV ++L NF
Sbjct: 238 LTKAGVFESRVLSNF 252
>gi|383452652|ref|YP_005366641.1| NAD-binding oxidoreductase [Corallococcus coralloides DSM 2259]
gi|380733716|gb|AFE09718.1| NAD-binding oxidoreductase [Corallococcus coralloides DSM 2259]
Length = 230
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 19/242 (7%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + +PAA+ L +DI P + SH GQY+QLR+ G+P AIASPP
Sbjct: 4 WHTATVTARNPAADGLTDWVLDIGGTP-LVGSHAHPGQYVQLRLPG-GQPGMFAIASPP- 60
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
A +EFL+K G+ L L G VE+++ G GF +++ + + +L+FA
Sbjct: 61 -APNGTRWEFLLKD-EGTLPSALLHLPLGAHVEVTRPAGPGFPMEKARGRN----LLLFA 114
Query: 176 TGSGISPIRSLIESGFSSKERS---DVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
+GSGIS IR +I + +ER V LY+GAR AYQ + ++W + GV+++ +S
Sbjct: 115 SGSGISAIRPVIAA--VRQERGAYGQVTLYFGARTASGFAYQHELQQWMADGVRVLCTVS 172
Query: 233 QPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
+P + W G TGYVQA + + +CG M ++V + + GV +
Sbjct: 173 RPGASGWQGLTGYVQAHLGEERL----EHAIAFVCGPSDMVQDVMAQLAQRGVPRSAVFL 228
Query: 292 NF 293
N+
Sbjct: 229 NY 230
>gi|442317743|ref|YP_007357764.1| NAD-binding oxidoreductase [Myxococcus stipitatus DSM 14675]
gi|441485385|gb|AGC42080.1| NAD-binding oxidoreductase [Myxococcus stipitatus DSM 14675]
Length = 230
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + SPAA+ L + +DI P + +H GQY++L + + + + AIAS P
Sbjct: 4 WHSGVVTARSPAADGLTDLVLDIQGTP-LEGTHLHPGQYVRLSLPGL-QASLFAIASAPE 61
Query: 116 FASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+EFL+K + L L G V+++ G GF ++R + D VL+FA
Sbjct: 62 PHGTR--WEFLLKD-GSPLPDALIRLPLGAKVQVTAPEGTGFPLERARGHD----VLLFA 114
Query: 176 TGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
TGSGIS IR LI S +ER V+LY+GAR AYQ + WE +++V +S
Sbjct: 115 TGSGISAIRPLIAS--VRRERDTFGRVKLYFGARTPTAFAYQGELHAWEGGDIQVVRTVS 172
Query: 233 QPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
+P + W G TGYVQA + Q +CGQ M V + GV E I
Sbjct: 173 RPGASGWQGLTGYVQAHLGEE----SVQNARAFVCGQPDMVRGVLDALKERGVPREHIFF 228
Query: 292 NF 293
N+
Sbjct: 229 NY 230
>gi|302796129|ref|XP_002979827.1| hypothetical protein SELMODRAFT_419405 [Selaginella moellendorffii]
gi|300152587|gb|EFJ19229.1| hypothetical protein SELMODRAFT_419405 [Selaginella moellendorffii]
Length = 219
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 92/181 (50%), Gaps = 50/181 (27%)
Query: 113 PPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
PP G EFLVK V G+T+ VLC L KGD V++SQV+G+GF D++ PP+++ T+L
Sbjct: 89 PPKIWEFKGFLEFLVKDVEGTTSAVLCDLAKGDKVDLSQVVGKGFDTDQLYPPEKFQTLL 148
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
FATG SD+R ++ + + + D + GV I+P+LS
Sbjct: 149 FFATG-------------------SDIRHFFSSFHSRSFISWDSLRH----GVSIIPILS 185
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
Q DG+W GE+GYVQ +VT ++ AEGV EKI+ N
Sbjct: 186 QTDGSWMGESGYVQ---------------------------DVTDLLSAEGVPQEKIILN 218
Query: 293 F 293
F
Sbjct: 219 F 219
>gi|383783660|ref|YP_005468227.1| oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
ferrooxidans C2-3]
gi|383082570|dbj|BAM06097.1| oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
ferrooxidans C2-3]
Length = 219
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 20/236 (8%)
Query: 61 LAEISPAAES--LFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
++EI P E+ LF D P GQ++ L D GK ++ AIASPPS
Sbjct: 1 MSEIIPFEENVRLFKFDTGGVDFP------FHQGQFISLAGSD-GKSSYFAIASPPSL-- 51
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G+FE LVK ST + L GD + IS G+GFA+D P +L G+
Sbjct: 52 -KGSFEILVKR-GNSTTDYLFSRSVGDRISISGPQGKGFALD----PYVGKNLLFVGVGT 105
Query: 179 GISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN 237
I+P+RS + + + + + + +G + + D+ EW G ++ ++ PD
Sbjct: 106 AIAPLRSTLLTALERRNDFNRISFLFGTLTPNHIWFGDEMDEWHQKGAEVHITVTYPDET 165
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
W +G+VQ ++K + T V LCG K+M EE T ++ + E IL NF
Sbjct: 166 WDRHSGFVQDILRQSKDPLHE--TVVYLCGMKEMVEETTKVLKERSIPEEMILLNF 219
>gi|308800660|ref|XP_003075111.1| unnamed protein product [Ostreococcus tauri]
gi|116061665|emb|CAL52383.1| unnamed protein product [Ostreococcus tauri]
Length = 269
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 70 SLFHVSIDISDAPDIASSHTRAGQYLQLRVV-DVGKPTFLAIASPPSFASASGAFEFLVK 128
+L +++D+ + A + RAGQ++Q R + ++P F FE L+K
Sbjct: 62 ALRKLTLDV--GREDAKAFARAGQFVQARTSSETAAAFIAIASAPGEF---DDGFELLIK 116
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
+ GS A + + G +E++ MG+GF V + ++ ATGSGISPIRSL+
Sbjct: 117 AQVGSAANAIADVDAGGELEVTVAMGKGFDVSSVSGK---KKAVLIATGSGISPIRSLLR 173
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAA 248
SG + + ++ LYYG N K A+ KE ES +IV V S+ G YVQ
Sbjct: 174 SG--ALDGAESTLYYGTSNEKATAF---LKESESWPCEIVRVYSEDSGK------YVQDV 222
Query: 249 FSR--AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
A + T LCGQK+M I+ GV E L NF
Sbjct: 223 LREDVASGKIDASETFAALCGQKEMTMAAIEILTGAGVPREACLMNF 269
>gi|153003657|ref|YP_001377982.1| oxidoreductase FAD/NAD(P)-binding subunit [Anaeromyxobacter sp.
Fw109-5]
gi|152027230|gb|ABS24998.1| oxidoreductase FAD/NAD(P)-binding domain protein [Anaeromyxobacter
sp. Fw109-5]
Length = 235
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
+ I+ P +A++H GQ +++R D G+ F A+AS P +G + LVK
Sbjct: 24 GLRIALPPSLAAAHVLPGQVVKIRT-DAGE-GFFALASAPD---PAGPADLLVKRGGHVA 78
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
V+ G+ +E++ G+GF V + D VL+FA GS I+P+R+L++ ++
Sbjct: 79 DAVIARAVPGERLELTPPFGKGFPVHEAEGKD----VLLFAAGSAIAPVRALVQHLVRAR 134
Query: 195 ER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ-AAFSRA 252
ER V L+YG R+ AY + WE GV+++ S D W G G VQ A S A
Sbjct: 135 ERFGRVTLFYGQRHGGEFAYLGEHLAWERRGVRVILCPSGADDAWQGLRGRVQEVARSLA 194
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
P G M E+V + G+ E++ NF
Sbjct: 195 FGGGPPTDAVAFASGMTAMVEDVRRTLARAGIPPERVHANF 235
>gi|302391159|ref|YP_003826979.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Acetohalobium arabaticum DSM 5501]
gi|302203236|gb|ADL11914.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acetohalobium
arabaticum DSM 5501]
Length = 363
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 113/239 (47%), Gaps = 20/239 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+AE+ ++ HV +++ + DI AGQY Q+ + + +IASPPS A
Sbjct: 132 VAEVRSVTPTVKHVRLEMIEPTDI---EFEAGQYAQIMIPGFEEYRAYSIASPPSMAREE 188
Query: 121 GAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
A +F +K V G T+ V +++GD+V+ + G F +D + +++ G+
Sbjct: 189 NALQFTIKLVPGGLCTSWVHFAMEEGDIVKFTGPFGH-FYLDEESDRE----IILIGGGA 243
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQP-- 234
G++P+R ++E R Y+GARN + Y D+F E E + +P LS P
Sbjct: 244 GMAPMRGILERLDELGMPRPTRYYFGARNSDELYYGDRFAELEEKYDNFEYIPALSDPTP 303
Query: 235 --DGNWSGETGYVQAAFS-RAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
NW G TG+V R + N + LCG M + I++ G+ EK++
Sbjct: 304 EDKKNWDGPTGFVTDVLDEREGSLENAES---YLCGPPPMLDAAERILVDHGMPEEKVM 359
>gi|384086078|ref|ZP_09997253.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 338
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 119/268 (44%), Gaps = 23/268 (8%)
Query: 29 IPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSH 88
+PL LK + R + AA ++ T + +++P +LF P
Sbjct: 80 MPLSDLKIEVREIG--AAKDIQIKTLPARVAKIEDVAPDVRALF------LKIPSTERLQ 131
Query: 89 TRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST--AEVLCGLKKGDV 146
GQY+ + + D G+ F ++A+ P+ E +K V G T V +K+ D+
Sbjct: 132 FLPGQYIDILLKDGGRRGF-SLANTPN---DDALLELHIKKVEGGTFTGHVFSAMKEKDI 187
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
V +G F P +L+ ATG+G +P++ ++ES F+ + Y+G R
Sbjct: 188 VRFEGPLGTFFVRQESTRP-----LLMVATGTGFAPLKGMLESLFAQGSIRPIHFYWGVR 242
Query: 207 NLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + Y+D +EW+S + + ++SQPD WSG TGYV K +
Sbjct: 243 HSEDFYYEDLLQEWQSLHNHFNLTKIVSQPDSRWSGPTGYVTEQV--IKDFPDASAFDAY 300
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+CG M +++ + G+ SE I +
Sbjct: 301 ICGHPDMVFSLSAALAQAGLDSEHIFAD 328
>gi|339323127|ref|YP_004682021.1| GntR family transcriptional regulator [Cupriavidus necator N-1]
gi|338169735|gb|AEI80789.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD
[Cupriavidus necator N-1]
Length = 332
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 23/267 (8%)
Query: 34 LKPQRRRLATLAAAAVRQDTTVWTPTP----LAEISPAAESLFHVSIDISDAPDIASSHT 89
L Q + L L + R+D P + + P + + H+ +++ PD +
Sbjct: 74 LACQAQPLGDLVISTAREDEACAEPARYRALVQAVRPLSADVLHIELEV---PDTGALDY 130
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
R GQYL+L D G+ ++AS P G + V+ + G T +L +K GD V
Sbjct: 131 RPGQYLKLLSED-GRARSFSMASVPR----DGHVDLHVRRIPGGAFTDGILPQMKAGDAV 185
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G F R +Y +L+ ATG+G++PI++++ES + V LY+G R
Sbjct: 186 DVELPLGSFFYRAR-----DYRPLLMVATGTGLAPIKAILESLMDDPDCPPVSLYWGMRK 240
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + W + VPVLS+ W G GYV A + + + L
Sbjct: 241 PEDLYLHTDIPAWGERLYDFQYVPVLSRAGAGWQGRRGYVHDA--ALADLGDLSEHAIYL 298
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M + + LA G S++ I +
Sbjct: 299 CGSPNMIRDARAAFLASGASTDHIYAD 325
>gi|421745552|ref|ZP_16183400.1| GntR family transcriptional regulator [Cupriavidus necator HPC(L)]
gi|409775945|gb|EKN57385.1| GntR family transcriptional regulator [Cupriavidus necator HPC(L)]
Length = 333
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 24/268 (8%)
Query: 34 LKPQRRRLATLAAAAVRQDTTVWTP----TPLAEISPAAESLFHVSIDISDAPDI-ASSH 88
L Q + + L + R+D P + ++ P ++ V +++ PD+ A+
Sbjct: 74 LACQAQPVGDLVISTAREDEACAEPMRHRARIEQVLPLTPTVLQVRLEV---PDLDAALD 130
Query: 89 TRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
R GQYL+L + G+ ++AS P G+ E V+ + G T +L GL GD
Sbjct: 131 YRPGQYLKL-IAAEGQARTFSMASVPQ----GGSIELHVRRIPGGAVTDRILPGLAPGDA 185
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
VE+ G F R +Y +L+ ATG+GI+PI++++ES + V LY+G R
Sbjct: 186 VEVELPHGNFFYRAR-----DYRPLLMVATGTGIAPIKAILESLMDDPDCPPVSLYWGMR 240
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + + W + VPVLS+ W G GYV A + + +
Sbjct: 241 EEGDLYLHQQIEGWAERLYDFRYVPVLSRGAAGWQGRRGYVHHA--AVDDLGDLSEHAIY 298
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
LCG M + L G S+E I +
Sbjct: 299 LCGSPDMIRDARQAFLDRGASTEHIYAD 326
>gi|412341063|ref|YP_006969818.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica 253]
gi|408770897|emb|CCJ55696.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica 253]
Length = 336
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----R 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + Q + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAVLQDFDDLSEQ--ALYLCGSPTMIAQARHRFAERGASLDHLYAD 324
>gi|377811637|ref|YP_005044077.1| putative flavodoxin oxidoreductase [Burkholderia sp. YI23]
gi|357940998|gb|AET94554.1| putative flavodoxin oxidoreductase [Burkholderia sp. YI23]
Length = 324
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 12/162 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQYLQ+ + D + ++A+PP S + V+ VAG + VL L G +
Sbjct: 118 RAGQYLQIHLDDETVRNY-SMANPPH---QSDSVHLHVRHVAGGRFSDGVLKELAVGKKL 173
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G F D P V++ ATG+G +P++S++E K ++LY+GAR
Sbjct: 174 RIELPYGEFFFRDESAKP-----VILVATGTGFAPVKSIVEDAIKRKLARPMKLYWGARR 228
Query: 208 LKRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAA 248
+ + + ++W G V+ VPVLS P+GNW+G TG+V A
Sbjct: 229 EQDLYLAELARKWHEEGHVEFVPVLSDPEGNWTGRTGFVHRA 270
>gi|33591591|ref|NP_879235.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis
Tohama I]
gi|384202877|ref|YP_005588616.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis CS]
gi|408414180|ref|YP_006624887.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis
18323]
gi|427820112|ref|ZP_18987175.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica D445]
gi|427822706|ref|ZP_18989768.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica Bbr77]
gi|33571234|emb|CAE44694.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis
Tohama I]
gi|332380991|gb|AEE65838.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis CS]
gi|401776350|emb|CCJ61530.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella pertussis
18323]
gi|410571112|emb|CCN19326.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica D445]
gi|410587971|emb|CCN03021.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica Bbr77]
Length = 336
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----H 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQAKHRFAERGASLDHLYAD 324
>gi|410422091|ref|YP_006902540.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica MO149]
gi|408449386|emb|CCJ61074.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica MO149]
Length = 336
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----H 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQAKHRFAERGASLDHLYAD 324
>gi|73537600|ref|YP_297967.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding subunit [Ralstonia
eutropha JMP134]
gi|72120937|gb|AAZ63123.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Ralstonia eutropha JMP134]
Length = 332
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 34 LKPQRRRLATLAAAAVRQDTTVWTPTP----LAEISPAAESLFHVSIDISDAPDIASSHT 89
L Q + LA L + R+D P + + P + + HV +++ DA +A
Sbjct: 74 LACQAQPLADLVISTAREDEACAEPARHQAIVRGVRPLSLDVLHVELEVPDAGTLA---Y 130
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
R GQYL+L D G ++AS PS G + V+ + G T +L LK GD V
Sbjct: 131 RPGQYLKLVTGD-GLARSFSMASVPS----EGRVDLHVRRIPGGAFTDGILPRLKAGDAV 185
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G F + +Y +L+ ATG+G++PI++++ES + V LY+G R
Sbjct: 186 DVELPLGTFFYRAK-----DYRPLLMVATGTGLAPIKAILESLMDDPDCPPVSLYWGMRQ 240
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + W + VPVLS+ W G GYV A + + + L
Sbjct: 241 PEDLYLHADIPAWGERLYDFQYVPVLSRAGDGWQGRRGYVHDA--ALADLGDLSEHAIYL 298
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M + + +A G S E + +
Sbjct: 299 CGSPNMIRDARAAFIARGASPEHLYAD 325
>gi|33603613|ref|NP_891173.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica RB50]
gi|33577738|emb|CAE35003.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica RB50]
Length = 336
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----R 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQAKHHFAERGASLDHLYAD 324
>gi|424866725|ref|ZP_18290555.1| putative oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
sp. Group II 'C75']
gi|206603030|gb|EDZ39510.1| Probable oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
sp. Group II '5-way CG']
gi|387222654|gb|EIJ77077.1| putative oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
sp. Group II 'C75']
Length = 229
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 109/236 (46%), Gaps = 20/236 (8%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASA 119
PL+ I P E++ D S+ P + GQ++ + D GK ++ A+AS P+ A
Sbjct: 10 PLSRIVPFEENVRLFEFDCSNDPFFF----QQGQFISVPG-DNGKSSYFAVASSPARADR 64
Query: 120 SGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
FE LVK++ T E L K GD V + +G+GF ++ P +L G+
Sbjct: 65 ---FEILVKNMNPLT-ERLFQKKVGDTVALQGPLGKGFPLE----PYTGMNLLFVGVGTA 116
Query: 180 ISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDG 236
I+P+RS + + RSD + LY+G + + ++ W G + ++ PD
Sbjct: 117 IAPLRSTLLAALD--RRSDFNRIELYFGTLTPNHIYFGEEMARWHEKGATVHITVTYPDE 174
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W +G+VQ + + T V LCG K+M E+ ++ V IL+N
Sbjct: 175 TWDSHSGFVQEILRQCPDPLHQ--TVVYLCGMKEMVEDTIGVLKGRMVPESLILQN 228
>gi|410474689|ref|YP_006897970.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella parapertussis
Bpp5]
gi|408444799|emb|CCJ51574.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella parapertussis
Bpp5]
Length = 336
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----R 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQAKHRFAERGASLDHLYAD 324
>gi|427816624|ref|ZP_18983688.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica 1289]
gi|410567624|emb|CCN25195.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
bronchiseptica 1289]
Length = 336
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+P + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIAPLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----R 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQARHRFAERGASLDHLYAD 324
>gi|302769025|ref|XP_002967932.1| hypothetical protein SELMODRAFT_88309 [Selaginella moellendorffii]
gi|300164670|gb|EFJ31279.1| hypothetical protein SELMODRAFT_88309 [Selaginella moellendorffii]
Length = 160
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE------SGFSSKERS 197
GD +E+ + G + + +YPT+LIFA G GI+ ++LIE S + + R
Sbjct: 4 GDEIELGPLDSSGMDLRPVLFITQYPTLLIFAQGKGIAAAKALIETKDADVSSLNLRLRR 63
Query: 198 DVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFN 257
DVRL+Y A + +AY++KF EWE VK+ + + W G+ G Q + ++
Sbjct: 64 DVRLFYVAPRPELLAYKEKFAEWEKKKVKVCTSVEAANDQWDGQVGSFQELWDEDDLEYD 123
Query: 258 PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
P+ T VV+C + +E+ ++ + E+ +K
Sbjct: 124 PRSTAVVVCAEAGAEQELDELLENADIVKEQTVK 157
>gi|116695813|ref|YP_841389.1| putative oxidoreductase [Ralstonia eutropha H16]
gi|113530312|emb|CAJ96659.1| putative oxidoreductase [Ralstonia eutropha H16]
Length = 332
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 34 LKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESL----FHVSIDISDAPDIASSHT 89
L Q + L L + R+D P + A +L H+ +++ PD +
Sbjct: 74 LACQAQPLGDLVISTAREDEACAEPARYRALVQAVRALSADVLHIELEV---PDAGALDY 130
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
R GQYL+L D G+ ++AS P G + V+ + G T +L +K GD V
Sbjct: 131 RPGQYLKLLSED-GRARSFSMASVPR----DGRVDLHVRRIPGGAFTDGILPQMKAGDAV 185
Query: 148 EISQVMGRGF--AVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ +G F A+D Y +L+ ATG+G++PI++++ES + V LY+G
Sbjct: 186 DVELPLGSFFYRAMD-------YRPLLMVATGTGLAPIKAILESLMDDPDCPPVSLYWGM 238
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R + + W + VPVLS+ W G GYV A + + +
Sbjct: 239 RKPEDLYLHSDIPAWGERLYDFQYVPVLSRAGAGWQGRRGYVHDA--ALADLGDLSEHAI 296
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
LCG M + + LA G S++ I +
Sbjct: 297 YLCGSPNMIRDARTAFLASGASTDHIYAD 325
>gi|251773202|gb|EES53754.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptospirillum
ferrodiazotrophum]
Length = 227
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+L++ + + K ++ AIASPP E LVK G +E L L G+ +
Sbjct: 36 GQFLKV-LWEGEKGSYFAIASPPY---EKNHLEILVKRGKG-VSEKLFSLTGGETLSFEG 90
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESGFSSKERSDVRLYYGARNLKR 210
+G GF +D P + +L G+ I+P+RS L+E+ E + LY+G
Sbjct: 91 PLGNGFPLD----PHKSRNLLFVGVGTAIAPLRSTLLEALRRRNEFGRIALYFGTMTPNH 146
Query: 211 MAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQ 270
+ + + W GV +V ++ PD W +G+VQ RA+ PQ V CG K+
Sbjct: 147 LYFGEDLASWSQMGVDVVVTVTFPDTRWDRHSGFVQHIL-RAEGHPLPQTVAYV-CGMKE 204
Query: 271 MAEEVTSIVLAEGVSSEKILKN 292
M EE +++ + E IL+N
Sbjct: 205 MVEETIAVLKERAIPEEHILQN 226
>gi|91783980|ref|YP_559186.1| CDP-6-deoxy-delta-3,4- glucoseen reductase [Burkholderia xenovorans
LB400]
gi|91687934|gb|ABE31134.1| Putative CDP-6-deoxy-delta-3,4- glucoseen reductase [Burkholderia
xenovorans LB400]
Length = 341
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 21/234 (8%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
+SP + H+SI++ P+ A GQY+ + + + + +F ++AS A+A
Sbjct: 108 VSPLGPGVRHLSIEL---PEQAELRFNPGQYMNVLLGEGERRSF-SMAS----AAAGSVL 159
Query: 124 EFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGI 180
+F ++ V G T +L LK GD + + +G F V+ +P +L+ ATG+G+
Sbjct: 160 DFHIRRVPGGRFTDHMLASLKPGDPLNVELPLGSFRFHVEDYRP------LLMVATGTGL 213
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNW 238
+P+++++ES + V LY+GAR + D+ ++W + + VPVLS+P W
Sbjct: 214 APVKAILESLMDDPDCPPVWLYWGARTEADLYLHDEIQQWGARLYEFQYVPVLSRPGSEW 273
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+G GYVQ A + + V LCG M + L +G S + +
Sbjct: 274 AGRQGYVQHAV--CEDFADLSEYAVYLCGSPTMINDARRHFLEKGASINHLYAD 325
>gi|193214065|ref|YP_001995264.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Chloroherpeton thalassium ATCC 35110]
gi|193087542|gb|ACF12817.1| oxidoreductase FAD/NAD(P)-binding domain protein [Chloroherpeton
thalassium ATCC 35110]
Length = 304
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHT 89
P + + PQ R + + L E+ E LFH+ I DI
Sbjct: 16 PFMSVPPQYTRKMIVMKTDKVYKCKIINVIKLTEL----EKLFHLRIVDQRERDIFQ--F 69
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
R GQ++ L V G+ P S +S++ E++ + AG T VL K G V
Sbjct: 70 RPGQFVMLDVPGYGE-------VPISLSSSTNNHEYIELCIRKAGRTTNVLHEAKIGSYV 122
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESGFSSKERSDVRLYYGAR 206
I G F ++++ + +L+ A G GI+P+R L DV + YGA+
Sbjct: 123 GIRGPFGNSFPMEKMAGHN----ILLIAGGLGIAPLRGPLYWVADYRDHYKDVHVLYGAK 178
Query: 207 NLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+M + ++ EWE + +K++ ++ PD NW+G G + F + F+PQ T ++
Sbjct: 179 EPSQMLFTYQYDEWERVNHIKMLSIVEHPDENWTGHVGRITKLFDEIE--FDPQDTFAIV 236
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKIL 290
CG M + V S + G+ ++
Sbjct: 237 CGPPVMFKFVCSHLDKMGIPMNRMF 261
>gi|160901557|ref|YP_001567138.1| oxidoreductase FAD/NAD(P)-binding subunit [Petrotoga mobilis SJ95]
gi|160359201|gb|ABX30815.1| oxidoreductase FAD/NAD(P)-binding domain protein [Petrotoga mobilis
SJ95]
Length = 372
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL--AEI-SPAAESLFHVSIDISDAP---- 82
PLL + ++ + V+ D + P L A+I E + ++ DI +
Sbjct: 95 PLLDEEEMKQNIRLSCQVKVKSDIAIEIPEELFSAKIFKGVVEKINDLTYDIKEVKIKLV 154
Query: 83 DIASSHTRAGQYLQLRV-----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STA 135
+ +AGQY+QL + ++ +IAS PS + EF ++ V G +T
Sbjct: 155 EPNEIEFKAGQYMQLVIPPYEKINEYTQRAYSIASSPS---QKDSIEFFIRLVPGGIATT 211
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK- 194
V LK+ D +E+ G + D ++ A GSG++PI+S++ F +
Sbjct: 212 YVHKYLKENDQMELVGPFGEFYM------RDTDADMICVAGGSGLAPIKSIVADMFEREI 265
Query: 195 ERSDVRLYYGARNLKRMAYQDKFKEWESSGVK--IVPVLS--QPDGNWSGETGYVQ---A 247
+V L++GAR+LK + Y D F++ E + VP LS QP+ NW GETG +
Sbjct: 266 TNRNVWLFFGARSLKDLYYLDFFQDMEKKWDRFHFVPALSEPQPEDNWKGETGLITDVLG 325
Query: 248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + K N Q G LCG M ++ A G+S +KI
Sbjct: 326 KYFKEKMDQNTQKEG-YLCGSPGMINACVKVMTANGISEDKI 366
>gi|344200851|ref|YP_004785177.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Acidithiobacillus ferrivorans SS3]
gi|343776295|gb|AEM48851.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidithiobacillus
ferrivorans SS3]
Length = 338
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D G+ +F ++A+ P E +K V G T V LK+ D++
Sbjct: 135 GQYIDILLKDGGRRSF-SLANVPG---DDALLELHIKKVPGGAFTGHVFGALKEKDILRF 190
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F P +L+ ATG+G +PI+ ++ES F+ + Y+G R+ +
Sbjct: 191 EGPLGTFFIRQESTRP-----LLMVATGTGFAPIKGMLESLFAQGSIRPIHFYWGVRHAE 245
Query: 210 RMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
Y D EW+S ++ ++S+PD +WSG TGYV A + +CG
Sbjct: 246 DFYYHDLLSEWQSRHDHFQVTQIVSRPDASWSGATGYVTAQV--IHDFPDASAIDAYICG 303
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M +++ + G++ E + +
Sbjct: 304 HPDMVFSLSAALQGVGLNPEHVFAD 328
>gi|295695610|ref|YP_003588848.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Kyrpidia tusciae DSM 2912]
gi|295411212|gb|ADG05704.1| oxidoreductase FAD/NAD(P)-binding domain protein [Kyrpidia tusciae
DSM 2912]
Length = 350
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 48 AVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTF 107
AV QD T T + + +D+ + DI + AGQ+ + R+ + +
Sbjct: 124 AVVQDNTACT-----------HDIHRIRLDLIEPGDIPYA---AGQFFEFRIPESEETRA 169
Query: 108 LAIASPPSFASASGAFEFLVKSVAGST-AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPD 166
++A+P EF V+ V G + +CGL+ G+ +V+G G ++Q D
Sbjct: 170 YSVATP---YRPGEPLEFHVRRVPGGVGSNYMCGLQPGE-----RVIGSG-PYGKMQLRD 220
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SG 224
+L A GSG++PI+ L+E FS+ + +YGAR+++ + D ++E E +
Sbjct: 221 RNKNLLFVAGGSGMAPIKGLLEELFSTSYDYEAWFFYGARSVRDLYLADYWREMEQKHAN 280
Query: 225 VKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
+P LS+ P W GE GY+ +R + F+ G LCG + + ++
Sbjct: 281 FHFIPALSERDPAEPWDGEEGYIADVVARQFERFD--GMDAYLCGPPMLIQTTLKVLYKG 338
Query: 283 GVSSEKILKN 292
G+ S I +
Sbjct: 339 GLRSSNIFYD 348
>gi|377820008|ref|YP_004976379.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Burkholderia sp. YI23]
gi|357934843|gb|AET88402.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
YI23]
Length = 343
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST--AEVLCGLKKGDVVE 148
AGQY++ + D GK ++ASPP G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKD-GKRRSYSMASPPHH---EGPLELHIRHMPGGTFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F D + P +++ A+G+G +PI+++IE + LY+G R
Sbjct: 190 FEGPLGTFFLRDESEKP-----IVLLASGTGFAPIKAIIEHAVFKNLNRPMTLYWGGRRA 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD NW+G TG+V A + + + G V
Sbjct: 245 KDLYMMDLAEQWAKEIPNFKFVPVLSEPDASDNWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|410477892|ref|YP_006765529.1| oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
ferriphilum ML-04]
gi|406773144|gb|AFS52569.1| putative oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
ferriphilum ML-04]
Length = 229
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 16/234 (6%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASA 119
P++ I P + + D S P + GQ++ + + GK + A+AS P
Sbjct: 10 PISRIVPFEKDVRLFEFDCSGDPFVF----LPGQFIAVPGAN-GKSAYFAVASTPG---K 61
Query: 120 SGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
S FE LVK++ T E L G + G+ + + +G+GF +D P + +L G+
Sbjct: 62 SDRFEILVKNMNPLTEE-LFGKRVGETLSLQGPLGKGFPLD----PYKGMNLLFVGVGTA 116
Query: 180 ISPIRSLIESGFSSKERSD-VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNW 238
I+P+RS + + +E + + LY+G + + ++ W G + ++ PD W
Sbjct: 117 IAPLRSTLLAALDRREEFNRIELYFGTLTPNHIYFGEEMASWHERGATVHITVTYPDETW 176
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+G+VQ + + T V LCG K+M E+ ++ V IL+N
Sbjct: 177 DSHSGFVQEILRQCPDPLHE--TVVYLCGMKEMVEDTIGVLKGRMVPESLILQN 228
>gi|86157175|ref|YP_463960.1| FAD/NAD(P)-binding oxidoreductase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85773686|gb|ABC80523.1| FAD/NAD(P)-binding oxidoreductase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 235
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
I +S P +A +H GQ +++R F A+AS PS + LVK
Sbjct: 24 GIRLSLPPALARAHRAPGQVVKVRTA--AGEGFFALASAPS---PDAVVDLLVKRGGKVA 78
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
+ G + I++ G+GF V+ D VL+FA GSGI+PIR++++ + +
Sbjct: 79 DAAIVAAAPGATLAITEPFGKGFPVEEAAGRD----VLLFAAGSGIAPIRAVVQHVLAHR 134
Query: 195 ER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ-AAFSRA 252
+ V L+YG R+ AY+ + WE GV++V S D W G G VQ A + A
Sbjct: 135 DAFRRVTLFYGQRHGAEFAYRAEHLAWERGGVRLVLCPSGEDDAWPGVRGRVQEVARALA 194
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
P+ T + G M ++V ++ G+ + + NF
Sbjct: 195 FGGTPPEETVAFVSGMTAMVDDVRRVLAGAGIPPQHVFANF 235
>gi|406928509|gb|EKD64297.1| hypothetical protein ACD_51C00028G0023 [uncultured bacterium]
Length = 225
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
+GQ++ + + D P+ ++ A + A FE LVK + G ++ L GL+ G V+
Sbjct: 33 SGQFVMVEITDGKDPSGVSRAYSIASAPDGKRFELLVKILPDGRGSQFLNGLQDGAVLNF 92
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G F +D D VL ATG+G++PIR++I + SS +V+L++G R L
Sbjct: 93 KGPFGH-FLMDTSSKKD----VLFVATGTGLAPIRAMINANISSGR--NVKLFFGVRYLA 145
Query: 210 RMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ +++FK+ G+ +S+P+G +SG G V + F+ + V +CG K
Sbjct: 146 DIFMEEEFKDL---GMNYKICVSRPEGAYSGFVGRVTDLIEKTD--FDYKNLQVYICGSK 200
Query: 270 QMAEEVTSIVLAEGVSSEKI 289
QM++ V + L +GV E I
Sbjct: 201 QMSDSVRTYFLGKGVLPEDI 220
>gi|114778469|ref|ZP_01453313.1| hydrogenase, putative [Mariprofundus ferrooxydans PV-1]
gi|114551194|gb|EAU53753.1| hydrogenase, putative [Mariprofundus ferrooxydans PV-1]
Length = 231
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 24/238 (10%)
Query: 64 ISPAA-ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPT--FLAIASPPSFASAS 120
+ PA +++ +++ D D+ S AGQY++L + V +P + AIAS P S+
Sbjct: 10 VDPACHDTVMQLTLASPDGADVRS--FTAGQYVRLAIPGVKEPAAGYFAIASGPESLSS- 66
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
++F +K+ AG + LC ++ G +E+ MG+GF ++ + D Y + G+GI
Sbjct: 67 --YQFYIKN-AGPLSAYLCDMQAGAELEVEGPMGKGFDLNTHKGKDVY----LIGVGTGI 119
Query: 181 SPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN 237
+P+RSL RSD V +Y G R D+ E S +++ L +
Sbjct: 120 APLRSLWNHIIC--HRSDFGKVAIYAGFRTAMHQMLTDELAELASHDIEVSITLEAGHDS 177
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLC--GQKQMAEEVTSIVLAEGVSSEKILKNF 293
W G GYVQ A P G+ V C G M + T + G IL N+
Sbjct: 178 WDGPIGYVQHALENDA----PDGSHAVACLAGMSAMVDACTETLHHLGFDDSCILLNY 231
>gi|415984591|ref|ZP_11559489.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
putative, partial [Acidithiobacillus sp. GGI-221]
gi|339834641|gb|EGQ62390.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
putative [Acidithiobacillus sp. GGI-221]
Length = 274
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D G+ F ++A+ P E +K V G T V +K+ D++
Sbjct: 57 GQYIDILLKDGGRRGF-SLANIPG---DDALLELHIKRVPGGVFTGHVFSAMKEKDILRF 112
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F P +L+ ATG+G +PI++++ES F+ + Y+G R+ +
Sbjct: 113 EGPLGTFFIRQESTRP-----LLMVATGTGFAPIKAMLESLFAQGSIRPIHFYWGVRHPE 167
Query: 210 RMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-GVVLC 266
YQD +EW++ ++ ++S+PD +WSG TGYV ++ F T +C
Sbjct: 168 DFYYQDLLREWQARHDHFQVTRIVSRPDASWSGATGYVT---TQVIHDFPDASTLDAYIC 224
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKN 292
G M +++ + G++ E I +
Sbjct: 225 GHPDMVFSLSAALQGAGLNPEHIYAD 250
>gi|302761142|ref|XP_002963993.1| hypothetical protein SELMODRAFT_166509 [Selaginella moellendorffii]
gi|300167722|gb|EFJ34326.1| hypothetical protein SELMODRAFT_166509 [Selaginella moellendorffii]
Length = 160
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE------SGFSSKERS 197
GD +E+ G + + +YPT+LIFA G GI+ ++LIE S + + R
Sbjct: 4 GDEIELGPFDSSGMDLRPVLFITQYPTLLIFAQGKGIAAAKALIETKDADVSSLNLRLRR 63
Query: 198 DVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFN 257
DVRL+Y A + +AY++ F EWE VK+ + + W G+ G Q + ++
Sbjct: 64 DVRLFYVAPRPELLAYKETFAEWEKKKVKVCTSVEAANDQWDGQVGSFQELWDEDDLEYD 123
Query: 258 PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
P+ T VV+C + +E+ ++ + E+ +K
Sbjct: 124 PRSTAVVVCAEAGAEQELDELLENADIVKEQTVK 157
>gi|384101854|ref|ZP_10002884.1| cytochrome P450, reductase [Rhodococcus imtechensis RKJ300]
gi|383840603|gb|EID79907.1| cytochrome P450, reductase [Rhodococcus imtechensis RKJ300]
Length = 331
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF V+ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHRRQYSMANTPG---ESKQLEFHVRRQPGGVATDGWVFGALSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G F R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 EMAGPLG-DF---RLDPEDEGPMILL-GGGTGLAPLKSMVRQALTVAPERAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D WSG TGYV AF + +G L
Sbjct: 243 AADLYDVDLFREWERAHPGFRYVPCLS--DSTWSGRTGYVTDAF--VEDFDTCRGYSGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|33598661|ref|NP_886304.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella parapertussis
12822]
gi|33574790|emb|CAE39450.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Bordetella
parapertussis]
Length = 336
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+A I+ + H+++++ PD + RAGQY+ + + D G+ ++AS P
Sbjct: 104 VAHIASLCSDVTHLALEVD--PDQWPDY-RAGQYMNIVLPD-GQTRSFSMASDPR----R 155
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G +F V+ +AG T L + G +EI +G F +Y +++ ATG+
Sbjct: 156 GRLDFHVRRIAGGRFTDRWLAAAQAGAPLEIEAPLGT-FCYHE----QDYRPLVMVATGT 210
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI++++ES E V LY+G R + +D W+ VPVLS+PD
Sbjct: 211 GLAPIKAMLESLLDDDECPPVSLYWGMRTEADLYLRDAIASWQGRLYEFDFVPVLSRPDA 270
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G +GYVQ A + + + LCG M + G S + + +
Sbjct: 271 GWRGRSGYVQDAV--LQDFDDLSEHALYLCGSPTMIAQAKHRFAERGASLDHLYAD 324
>gi|198282568|ref|YP_002218889.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665363|ref|YP_002424759.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247089|gb|ACH82682.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517576|gb|ACK78162.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 338
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D G+ F ++A+ P E +K V G T V +K+ D++
Sbjct: 135 GQYIDILLKDGGRRGF-SLANIPG---DDALLELHIKRVPGGVFTGHVFSAMKEKDILRF 190
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F P +L+ ATG+G +PI++++ES F+ + Y+G R+ +
Sbjct: 191 EGPLGTFFIRQESTRP-----LLMVATGTGFAPIKAMLESLFAQGSIRPIHFYWGVRHPE 245
Query: 210 RMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-GVVLC 266
YQD +EW++ ++ ++S+PD +WSG TGYV ++ F T +C
Sbjct: 246 DFYYQDLLREWQARHDHFQVTRIVSRPDASWSGATGYVT---TQVIHDFPDASTLDAYIC 302
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKN 292
G M +++ + G++ E I +
Sbjct: 303 GHPDMVFSLSAALQGAGLNPEHIYAD 328
>gi|427403084|ref|ZP_18894081.1| hypothetical protein HMPREF9710_03677 [Massilia timonae CCUG 45783]
gi|425718095|gb|EKU81047.1| hypothetical protein HMPREF9710_03677 [Massilia timonae CCUG 45783]
Length = 342
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
PT +A I AA + V++ + +A RAGQY++ + D GK +IA+ PSF
Sbjct: 104 PTRIAAIRRAAPDVAIVNLQLPANELLA---YRAGQYIEFLLKD-GKRRAYSIANAPSF- 158
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
G E ++ + G T V +K+ D++ +G F + P +++ A
Sbjct: 159 --EGPLELHIRHLPGGLFTDHVFGAMKERDILRFEGPLGTFFLREESDKP-----IVLLA 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
+G+G +P+++L+E K VRLY+G R + + + + WE++ VPV+S
Sbjct: 212 SGTGFAPVKALVEHLMHLKSTRPVRLYWGGRRPQDLYMDELCRAWETTLPDFTYVPVISD 271
Query: 234 --PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
P+ W+G TG+V AA + + + G V CG M +
Sbjct: 272 ALPEDAWTGRTGFVHAAV--MQDVIDLSGHQVYACGAPVMVD 311
>gi|419965845|ref|ZP_14481783.1| cytochrome P450, reductase [Rhodococcus opacus M213]
gi|414568767|gb|EKT79522.1| cytochrome P450, reductase [Rhodococcus opacus M213]
Length = 331
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHRRQYSMANTPG---ESKQLEFHIRRQPGGVATDGWVFGTLSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G F R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 EMAGPLG-DF---RLDPEDEGPMILL-GGGTGLAPLKSMVRQALTVTPERAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + + VP LS D WSG TGYV AF + +G L
Sbjct: 243 ESDLYDVDLFREWERAHPAFRYVPCLS--DAAWSGRTGYVTDAF--VEDFDTCRGHSGYL 298
Query: 266 CGQKQMAE 273
CGQ M +
Sbjct: 299 CGQPAMVD 306
>gi|91777388|ref|YP_552596.1| putative flavodoxin oxidoreductase [Burkholderia xenovorans LB400]
gi|91690048|gb|ABE33246.1| Putative flavodoxin oxidoreductase [Burkholderia xenovorans LB400]
Length = 334
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQYLQ+ + D + + ++A+PP S + + V+ V G + +L L KG +
Sbjct: 128 RAGQYLQIELEDGSRRNY-SMANPPH---ESDSIQLHVRHVPGGRFSEGMLRRLDKGHKL 183
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G D P V++ ATG+G +P++S++E + + LY+GAR
Sbjct: 184 RVELPFGEFSLQDDSTKP-----VILLATGTGFAPVKSIVEDAIKRRLDRPLTLYWGARR 238
Query: 208 LKRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + + ++W SG +K VPVLS+P+ +W+G G+V + + G V C
Sbjct: 239 AEDLYLAELAQKWHDSGKLKFVPVLSEPNADWNGRRGFVHETV--LEDFGSLDGYQVYAC 296
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKN 292
G M L G+ + +
Sbjct: 297 GNPAMTTAAHESFLKAGLPDDDFFSD 322
>gi|124516231|gb|EAY57739.1| probable oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
rubarum]
gi|124516239|gb|EAY57747.1| probable oxidoreductase FAD/NAD(P)-binding protein [Leptospirillum
rubarum]
Length = 229
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASA 119
PL+ I P E++ D S+ P + GQ++ + + GK ++ A+AS P+ A
Sbjct: 10 PLSRIVPFEENVRLFEFDCSNDPFFF----QQGQFISVPGEN-GKSSYFAVASSPARADR 64
Query: 120 SGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
FE LVK++ T E L + GD V + +G+GF ++ P +L G+
Sbjct: 65 ---FEILVKNMNPLT-EGLFRKQVGDTVALQGPLGKGFPLE----PYTGMNLLFVGVGTA 116
Query: 180 ISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNW 238
I+P+RS + + + + + + LY+G + + ++ W G + ++ PD W
Sbjct: 117 IAPLRSTLLAALDRRRDFNRIELYFGTLTPNHIYFGEEMAGWHEKGATVHITVTYPDETW 176
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+G+VQ + + T V LCG K+M E+ ++ V IL+N
Sbjct: 177 DSHSGFVQEILRQCPDPLHQ--TVVYLCGMKEMVEDTIGVLKGRMVPESLILQN 228
>gi|171061020|ref|YP_001793369.1| oxidoreductase FAD/NAD(P)-binding subunit [Leptothrix cholodnii
SP-6]
gi|170778465|gb|ACB36604.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptothrix
cholodnii SP-6]
Length = 331
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
L I P + HV++++ P R GQY+ L + D G ++AS P
Sbjct: 105 LESIRPLTPDVLHVALEL---PADLELVYRPGQYVNL-LTDGGVRRSFSLASKPD----G 156
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
+F ++ + G T + L + G+ +++ +G F P++Y V++ ATG+
Sbjct: 157 RRIDFQIRRIPGGRFTDQRLAQMAPGEAIDVELPLG-SFCFH----PEDYRPVVLAATGT 211
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDG 236
G++PI+S++ES + V LY+G R + D+ + W VPVLS+ D
Sbjct: 212 GLAPIKSIVESLMGDPDCPPVALYWGVRTEADLYLHDEIQRWHEQFDDFTYVPVLSRADA 271
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W G G+VQ A + + + + LCG M + A G S+ +
Sbjct: 272 TWRGRRGHVQQAV--LEDLPDLSEHAIYLCGSPNMIADAKRAFCASGASAAHL 322
>gi|197121209|ref|YP_002133160.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Anaeromyxobacter sp. K]
gi|196171058|gb|ACG72031.1| oxidoreductase FAD/NAD(P)-binding domain protein [Anaeromyxobacter
sp. K]
Length = 235
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
I ++ P +A +H GQ +++R F A+AS PS + LVK
Sbjct: 24 GIRLALPPALARAHRAPGQVVKVRTA--AGEGFFALASAPS---PDAVVDLLVKRGGKVA 78
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
+ G + +++ G+GF V+ D VL+FA GSGI+PIR++++ + +
Sbjct: 79 DAAIAAAAPGATLAVTEPFGKGFPVEEAAGRD----VLLFAAGSGIAPIRAVVQHVLAHR 134
Query: 195 ER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ-AAFSRA 252
+ V L+YG R+ AY+ + WE GV++V S D W G G VQ A + A
Sbjct: 135 DGFRRVTLFYGQRHGAEFAYRAEHLAWERGGVRLVLCPSGEDDAWPGVRGRVQEVARALA 194
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
P+ T + G M ++V ++ G+ +++ NF
Sbjct: 195 FGGTPPEETVAFVSGMTAMVDDVRRVLAGAGIPPQRVFANF 235
>gi|399912451|ref|ZP_10780765.1| CDP-6-deoxy-delta-3,4- glucoseen reductase [Halomonas sp. KM-1]
Length = 350
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQYL + ++D G P ++ASP F+F ++ V G T + + GD +++
Sbjct: 145 GQYLNV-MLDDGSPRSFSMASP----HRGELFDFHIRRVPGGHFTGRLETHYQAGDTLDV 199
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F D P D +L+ G+G++P++S+IES R + LY+G R +
Sbjct: 200 ELPLGN-FRHDAESPRD----LLMVGGGTGLAPLKSIIESLLDEPNRPSITLYWGVRRAE 254
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ ++ +W + + VPVLS PD W G G+V A + + LCG
Sbjct: 255 DLYLDEQLNDWARTLPDFRYVPVLSDPDPEWGGRRGFVHEAV--CQDFDDLSSFDAYLCG 312
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M + G+ E+I +
Sbjct: 313 PPPMIAAAKTSFAQRGLDVERIYAD 337
>gi|111019374|ref|YP_702346.1| cytochrome P450, reductase [Rhodococcus jostii RHA1]
gi|110818904|gb|ABG94188.1| cytochrome P450, reductase [Rhodococcus jostii RHA1]
Length = 331
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHCRQYSMANTPG---ESKQLEFHIRRQPGGVATDGWVFGTLSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 EMTGPLGDF----RLDPEDEGPMILL-GGGTGLAPLKSMVRQALTVTPERAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D WSG TG+V AF + +G L
Sbjct: 243 AADLYDVDLFREWERAHPGFRYVPCLS--DSTWSGRTGFVTDAF--VEDFDTCRGYSGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|405983652|ref|ZP_11041957.1| sulfite reductase, subunit B [Slackia piriformis YIT 12062]
gi|404388467|gb|EJZ83549.1| sulfite reductase, subunit B [Slackia piriformis YIT 12062]
Length = 304
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 67 AAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL 126
A E LF + D ++ H GQ+++L + VG+ ++I+S PS G E
Sbjct: 49 ATEKLF--EFRLIDERIRSAFHQDPGQFVELSIFGVGEAP-ISISSAPS---KQGFIELC 102
Query: 127 VKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
V+ AG EVL ++ GDVV I GRGF + ++ D +L+ A G GI+P++SL
Sbjct: 103 VRR-AGRFTEVLHAMQCGDVVGIRGPFGRGFPFEEMKGHD----ILLVAGGLGIAPLKSL 157
Query: 187 IESGFSSKER---SDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGET 242
I + ER V + YG++N + + ++++F+ W+ + + + W GE
Sbjct: 158 IN--YIHDERHAFGKVTIIYGSKNPREVMFRNQFEMWKHRRDFDLHLTVDNYEEGWDGEV 215
Query: 243 GYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G V F + + + T VLCG M V + +G+ ++I +F
Sbjct: 216 GLVTKPFESIE--VDAENTFGVLCGPPVMYRFVVEEMRKKGIPYDRIYMSF 264
>gi|397731775|ref|ZP_10498520.1| 2Fe-2S iron-sulfur cluster binding domain protein [Rhodococcus sp.
JVH1]
gi|396932183|gb|EJI99347.1| 2Fe-2S iron-sulfur cluster binding domain protein [Rhodococcus sp.
JVH1]
Length = 331
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHGRQYSMANTPG---ESKQLEFHIRRQPGGVATDGWVFGTLSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 EMTGPLGDF----RLDPEDEGPMILL-GGGTGLAPLKSMVRQALTVTPERAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D WSG TG+V AF + +G L
Sbjct: 243 AADLYDVDLFREWERAHPGFRYVPCLS--DSTWSGRTGFVTDAF--VEDFDTCRGYAGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|350544457|ref|ZP_08914063.1| CDP-6-deoxy-delta-3,4-glucoseen reductase-like [Candidatus
Burkholderia kirkii UZHbot1]
gi|350527765|emb|CCD37401.1| CDP-6-deoxy-delta-3,4-glucoseen reductase-like [Candidatus
Burkholderia kirkii UZHbot1]
Length = 344
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST--AEVLCGLKKGDVVE 148
AGQY++ + D GK ++ASPP G E ++ + G T V +K+ D++
Sbjct: 135 AGQYIEFILKD-GKRRSYSMASPPHH---EGPLELHIRHMPGGTFTDHVFGAMKERDILR 190
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F D + P +++ A+G+G +PI+++IE + LY+G R
Sbjct: 191 FEGPLGTFFLRDESEKP-----IVLLASGTGFAPIKAIIEHAAFKNLNHPMTLYWGGRRK 245
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 246 KDLYMMDLAEQWAREIPNFKFVPVLSEPDASDAWTGRTGFVHRAV--IEDLPDLSGYQVY 303
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 304 ACGAPVMVE 312
>gi|257053665|ref|YP_003131498.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halorhabdus
utahensis DSM 12940]
gi|256692428|gb|ACV12765.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halorhabdus
utahensis DSM 12940]
Length = 286
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 78 ISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV 137
+ D PD S GQ++QL V VG+ F +IAS P + G FE +++V G+
Sbjct: 37 VIDLPDGVSLDHDPGQFVQLFVPGVGEAPF-SIASSP---TNEGPFELCIRAV-GNVTNA 91
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KER 196
+ ++ GDVV I G+GF VD I + +L A G G++P+RS+I E
Sbjct: 92 IHDMEAGDVVGIRGPYGQGFDVDAIAGEN----LLCIAGGIGLAPLRSVINYALDRPGEF 147
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQPDGN-WSGETGYVQAAFSRAK 253
D+ YG + D+ + W +S V V PDG W G TG + +
Sbjct: 148 GDLTTLYGCTEPAEQLFPDELESWAASDVMAYRETVDEVPDGQAWDGPTGVITSLIPPLD 207
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
F+P+ T ++CG M V + +G++ ++I
Sbjct: 208 --FDPESTVALVCGPPVMYRFVIKALREKGLADDRI 241
>gi|385206526|ref|ZP_10033396.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
gi|385186417|gb|EIF35691.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
Length = 334
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQYLQ+ + D + + ++A+PP S + + V+ V G + +L L KG +
Sbjct: 128 RAGQYLQIELEDGSRRNY-SMANPPH---ESDSIQLHVRHVPGGRFSEGMLRRLDKGHKL 183
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G D P V++ ATG+G +P++S++E + + LY+GAR
Sbjct: 184 RVELPFGEFSLQDDSTKP-----VILLATGTGFAPVKSIVEDAIKRRLDRPLTLYWGARR 238
Query: 208 LKRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
++ + + ++W G +K VPVLS+P+ +W G G+V + + + G V C
Sbjct: 239 VEDLYLAELAQKWHDGGKLKFVPVLSEPNADWHGRRGFVHETV--LEDLGSLGGYQVYAC 296
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKN 292
G M L G+ + +
Sbjct: 297 GNPAMTTAAHESFLKAGLPDDDFFSD 322
>gi|293603020|ref|ZP_06685456.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Achromobacter piechaudii ATCC 43553]
gi|292818558|gb|EFF77603.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Achromobacter piechaudii ATCC 43553]
Length = 336
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 22/234 (9%)
Query: 64 ISPAAESLFHVSIDISDAP-DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA 122
I P + + H+++ + D P D GQY+ + + D G+ ++AS AS+ G
Sbjct: 108 IEPYTDDIIHLTLALPDGPLDYVP-----GQYMNVLLPD-GETRSFSMAS----ASSDGL 157
Query: 123 FEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
+F V+ + G T + L + G + I +G V D P +LI ATG+GI
Sbjct: 158 VDFHVRRIPGGRYTDQWLGQAQAGAPLTIEAPLG----VFSYHEEDWRPLILI-ATGTGI 212
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNW 238
+PI++++ES ++ V LY+G R + +D+ + W VPVLS+ D W
Sbjct: 213 APIKAILESLLDKEDCPPVTLYWGMRTQADLYLRDEIESWAGRLYEFNFVPVLSRADAGW 272
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G G+VQ A + + + LCG M + ++ G S + I +
Sbjct: 273 QGRRGHVQDAVLQDHDDLSEH--AIYLCGAPAMVRDAKHLLAGRGASLDHIYAD 324
>gi|194292318|ref|YP_002008225.1| ferredoxin:oxidoreductase fad/nad(p)-binding [Cupriavidus
taiwanensis LMG 19424]
gi|193226222|emb|CAQ72171.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding [Cupriavidus
taiwanensis LMG 19424]
Length = 333
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 23/259 (8%)
Query: 42 ATLAAAAVRQDTTVWTPTP----LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQL 97
A L + R D P + + P + + HV +++ P + R GQYL+L
Sbjct: 82 ADLVISTARDDEACAEPARHRAVVRAVRPLSADVLHVELEV---PGAGTLDYRPGQYLKL 138
Query: 98 RVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGR 155
+ G ++AS P G + V+ + G T +L ++ GD +E+ +G
Sbjct: 139 -LSSEGLARSFSMASVPR----DGRIDLHVRRIPGGAFTDGILPRMRAGDAIEVELPLGS 193
Query: 156 GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQD 215
F R +Y +L+ ATG+G++PI++++ES + V LY+G R + +
Sbjct: 194 FFYRAR-----DYRPLLMVATGTGLAPIKAILESLMDDPDCPPVSLYWGMRQAQDLYLHG 248
Query: 216 KFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
+ W + PVLS+ +W G GYV A + + + LCG M
Sbjct: 249 EIPAWGDRLYDFRYAPVLSRAGADWQGRRGYVHDA--ALADLGDLSEYAIYLCGSPDMIR 306
Query: 274 EVTSIVLAEGVSSEKILKN 292
+ + +A G S + + +
Sbjct: 307 DARAAFIAHGASPDHLYAD 325
>gi|420252591|ref|ZP_14755695.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Burkholderia sp. BT03]
gi|398054223|gb|EJL46354.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Burkholderia sp. BT03]
Length = 360
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + G ++AS P+ EF+++ ++++ GLK GD
Sbjct: 153 AGQYVDLTLPGPGITRSFSMASTPN---GERKVEFIIRKYPNGAFSSQLDGGLKAGD--- 206
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
++M +G + D+ +++ GSG+SP+ S++ S E+ +R +YGAR+
Sbjct: 207 --RLMAKGPYGTCFRREDQPGPMVLVGGGSGMSPLWSILNDHLESGEQRAIRFFYGARSR 264
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQG-TGV 263
+ + Y D+F E E+ + +P LS +P +W+GETG++ R + + +G
Sbjct: 265 RDLFYLDEFAELENRLPDFRFIPALSDAEPGDDWTGETGFIHEVLGRTLREESLEGEIDA 324
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GVS E++
Sbjct: 325 YTCGPPPMIDAVIPVLQMAGVSPERL 350
>gi|374369904|ref|ZP_09627921.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase
FAD-binding region [Cupriavidus basilensis OR16]
gi|373098491|gb|EHP39595.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase
FAD-binding region [Cupriavidus basilensis OR16]
Length = 300
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ I+P + + H+++++ P + R GQYL++ D G ++AS P
Sbjct: 105 IRHIAPLSADVVHLTLEL---PQAQALDYRPGQYLKIFTGD-GIARSFSMASVPR----D 156
Query: 121 GAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
+ V+ + G T +L GL+ D +++ +G GF + D+Y +++ ATG+
Sbjct: 157 RTVDLHVRRIPGGYFTERLLAGLRADDQLDVELPLG-GFYFRK----DDYRPLVMVATGT 211
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G++PI+S++ES + V LY+G R + + + W + + VPVLS+ DG
Sbjct: 212 GLAPIKSILESLMDDPDCPPVSLYWGMRTQADLYLHQQIQAWGARLYDFQYVPVLSRADG 271
Query: 237 NWSGETGYVQAAFS 250
WSG G+VQ A +
Sbjct: 272 TWSGRRGHVQHAVA 285
>gi|194277419|gb|ACF39372.1| cytochrome P450 reductase [Rhodococcus sp. DK17]
Length = 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHGRQYSMANTPG---ESKQLEFHIRRQPGGVATDGWVFGTLSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 EMTGPLGDF----RLDPEDEGPMILL-GGGTGLAPLKSMVRQALTVTPERAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D WSG TG+V F + +G L
Sbjct: 243 AADLYDVDLFREWERAHPGFRYVPCLS--DSTWSGRTGFVTDTF--VEDFDTCRGYSGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|424861474|ref|ZP_18285420.1| cytochrome P450 reductase [Rhodococcus opacus PD630]
gi|356659946|gb|EHI40310.1| cytochrome P450 reductase [Rhodococcus opacus PD630]
Length = 336
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 136 AGQYVELRVPGTDHGRQYSMANTPG---ESKQLEFHIRRQPGGVATDGWVFGSLSVGERV 192
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E++ +G R+ P DE P VL+ G+G++P++S+ ++ + LY+G R
Sbjct: 193 EMAGPLGDF----RLDPDDEGPMVLL-GGGTGLAPLKSMAHQALTATPERVIHLYHGVRE 247
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D +WSG +GYV AF + +G L
Sbjct: 248 ESDLYDVDLFQEWERAYPGFRYVPCLS--DQSWSGRSGYVTDAF--VEDFDTCRGYSGYL 303
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 304 CGPPAMVD 311
>gi|390574149|ref|ZP_10254290.1| oxidoreductase FAD-binding subunit [Burkholderia terrae BS001]
gi|389933897|gb|EIM95884.1| oxidoreductase FAD-binding subunit [Burkholderia terrae BS001]
Length = 371
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + G ++AS P+ EF+++ ++++ GLK GD +
Sbjct: 164 AGQYVDLTLPGPGITRSFSMASTPN---GERKVEFIIRKYPNGAFSSQLDGGLKAGDRLV 220
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + QP P VL+ GSG+SP+ S++ S E+ +R +YGAR+
Sbjct: 221 AKGPYGTCFRRED-QPG---PMVLV-GGGSGMSPLWSILNDHLESGEQRAIRFFYGARSR 275
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQG-TGV 263
+ + Y D+F E E+ + +P LS +P +W+GETG++ R + + +G
Sbjct: 276 RDLFYLDEFAELENRLPDFRFIPALSDAEPGDDWTGETGFIHEVLGRTLREESLEGEIDA 335
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GVS E++
Sbjct: 336 YTCGPPPMIDAVIPVLQMAGVSPERL 361
>gi|288940548|ref|YP_003442788.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Allochromatium vinosum DSM 180]
gi|288895920|gb|ADC61756.1| oxidoreductase FAD/NAD(P)-binding domain protein [Allochromatium
vinosum DSM 180]
Length = 284
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 53 TTVWTPTPL----AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
++++ PTP E E FH+ + P + + GQ++++ V+ +G+
Sbjct: 12 SSIYMPTPARIVAVEQFTELEKWFHLEL-----PSGFTIAHQPGQFVEVSVLGIGEAPIS 66
Query: 109 AIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEY 168
+SP A ++GAFE V+ V G E L L+ G ++ + G GF +DR Q D
Sbjct: 67 ICSSP---ARSNGAFELCVRRV-GKLTEALHRLEPGSMIGVRGPFGHGFPIDRFQGKD-- 120
Query: 169 PTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSG-VK 226
++ A G G++P+RSLI + + V L YGAR + K W G ++
Sbjct: 121 --IVFVAGGLGLAPLRSLITEVLDERGKYGRVALLYGARTPNDFLFPADLKAWAERGDIE 178
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSS 286
+ +P W G G + + F + T + G M + V +LA+G++
Sbjct: 179 CHVTVDRPTDGWDGHVGVITTLLPKID--FPARNTIATVVGPPVMYKFVLQDLLAKGIAE 236
Query: 287 EKILKNF 293
I +F
Sbjct: 237 GNIWLSF 243
>gi|119897511|ref|YP_932724.1| aromatic/alkene monooxygenase subunit gamma [Azoarcus sp. BH72]
gi|119669924|emb|CAL93837.1| conserved hypothetical aromatic/alkene monooxygenase, subunit gamma
[Azoarcus sp. BH72]
Length = 347
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV---AGSTAEVLCGLKKGDVV 147
AGQ++ + + + G ++AS PS + G F++K A STA + LK GD V
Sbjct: 139 AGQFVDITLPEKGITRSYSMASVPS---SPGQVSFIIKKYPNGAFSTA-LDTELKPGDPV 194
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F R + P P VLI GSG+SP+ S++ S E+ +R +YGAR
Sbjct: 195 LVKGPYGGCFR--REERPG--PMVLI-GGGSGMSPLWSILNDHIESGEQRPIRFFYGART 249
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKI--FNPQGT 261
+ + Y ++F E+E + +P LS +P+ W+GETGY+ +R K F+
Sbjct: 250 RRDLFYLEQFAEFEQKVPDFRFIPALSAAEPEDGWTGETGYIHEVVARTLKEEGFDGASI 309
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + +T ++ GV +++
Sbjct: 310 DAYTCGPAPMIDAITPVLHMAGVPPDQM 337
>gi|209517682|ref|ZP_03266519.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
H160]
gi|209501857|gb|EEA01876.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
H160]
Length = 350
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + G ++A+ PS +F+++ ++++ GL GD +
Sbjct: 143 AGQYVDLTIPGTGITRSFSMANTPS---GDATLQFIIRKYPNGAFSSQLDGGLSPGDRLI 199
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + QP P VL+ GSG+SP+ S++ S E +R +YGAR+
Sbjct: 200 AKGPYGTCFRRED-QPG---PMVLV-GGGSGMSPLWSILNDHVQSGEERPIRFFYGARSR 254
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQG-TGV 263
+ + Y D+F E E + +P LS +PD W+GETG++ SR + G
Sbjct: 255 RDLFYLDEFAELEEKLPDFRFIPALSNAEPDDGWTGETGFIHEVVSRTLRKEALAGEIDA 314
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M E V ++ GV+ E++
Sbjct: 315 YACGPTPMIEAVMPVLQMAGVAPERL 340
>gi|319764281|ref|YP_004128218.1| oxidoreductase FAD-binding domain-containing protein
[Alicycliphilus denitrificans BC]
gi|330826436|ref|YP_004389739.1| ferredoxin--NAD(+) reductase [Alicycliphilus denitrificans K601]
gi|317118842|gb|ADV01331.1| Oxidoreductase FAD-binding domain protein [Alicycliphilus
denitrificans BC]
gi|329311808|gb|AEB86223.1| Ferredoxin--NAD(+) reductase [Alicycliphilus denitrificans K601]
Length = 642
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 24/254 (9%)
Query: 45 AAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGK 104
AAA Q+ T T + ++P + VS+ + P+ S AGQY+ + ++D G+
Sbjct: 392 GAAAEAQEVYSATVTQMERLAP---DVMRVSLQL---PEGQSLPFVAGQYINI-LLDDGQ 444
Query: 105 PTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRI 162
+ AS P A E V+ V G T V +K GD V +G+ +
Sbjct: 445 RRAFSFASRPG---AGSQIELHVRLVPGGRFTTHVFEAMKVGDTVRFEGPLGQFTLREST 501
Query: 163 QPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW-- 220
P +L A +G +PI+S++E F+ + +RLY+G R + + + +EW
Sbjct: 502 HP------ILFIAGATGFAPIKSIVEDAFARGVQRPMRLYWGVRQPQDLYLLAQCEEWQR 555
Query: 221 ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSI 278
+ +VPV+S+ PD W+G TG V A + G V LCG +M E
Sbjct: 556 QHGNFTVVPVVSEPAPDDGWTGRTGLVHEAM--LSDFPDLSGNEVYLCGSVRMVETAVPA 613
Query: 279 VLAEGVSSEKILKN 292
+A+G+ +
Sbjct: 614 FIAQGLDENFCFSD 627
>gi|291612745|ref|YP_003522902.1| oxidoreductase FAD/NAD(P)-binding domain protein [Sideroxydans
lithotrophicus ES-1]
gi|291582857|gb|ADE10515.1| oxidoreductase FAD/NAD(P)-binding domain protein [Sideroxydans
lithotrophicus ES-1]
Length = 333
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 19/181 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
+GQY+ + + GKP ++A+ P E V+++AG T V +K+ D++
Sbjct: 134 SGQYIDI-LQKEGKPRSFSLANAPH---DDELLELHVRNIAGGEFTNHVFTKMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I +G F ++ P +IF A+G+G +P++++IE + ++ Y+G R
Sbjct: 190 IKGPLGNFFL------HEDSPRPIIFVASGTGFAPVKAIIEHALHIGLKREMHFYWGVRK 243
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQGTGVVLC 266
DK KEWE+ G+K PV+S D W+G G+V QA K + G V C
Sbjct: 244 QADFYMLDKVKEWEALGIKFTPVVS--DEQWNGRMGFVHQAVLDDFKDL---SGYAVYAC 298
Query: 267 G 267
G
Sbjct: 299 G 299
>gi|226361511|ref|YP_002779289.1| phenol hydroxylase reductase component [Rhodococcus opacus B4]
gi|226239996|dbj|BAH50344.1| putative phenol hydroxylase reductase component [Rhodococcus opacus
B4]
Length = 331
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LR+ G+ ++A+ P S EF ++ G A V + G+ V
Sbjct: 131 AGQYVELRIPGTGRGRQYSMANTPG---ESKLLEFHIRRQPGGAATDGWVFGSMSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G R+ P DE P +L+ G+G++P++S+ +S+ V LY+G R
Sbjct: 188 DMVGPLGDF----RLDPEDESPMILL-GGGTGLAPLKSIARQALTSEPDRVVHLYHGVRG 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D +EWE G + VP LS D WSG +GYV AF + +G L
Sbjct: 243 EADLYDVDLLREWEREHPGFRYVPCLS--DETWSGRSGYVTDAF--VEDFDTCRGHSGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|56476400|ref|YP_157989.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Aromatoleum aromaticum
EbN1]
gi|56312443|emb|CAI07088.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehyd rase reductase
[Aromatoleum aromaticum EbN1]
Length = 341
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ + G+ +F +IA+ P A E V+ V G T V +K+ D++
Sbjct: 134 AGQYIDFILAGGGRRSF-SIANAPDDADH---LELHVRHVPGGQFTEHVFNAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + D L+ G+G +PI+S++E + ER + LY+GAR+
Sbjct: 190 FEGPLG-SFGLRE----DSTGAALLIVGGTGFAPIKSIVEHAIRTGERRPMTLYWGARDR 244
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ D + WES+ G + VPVLS+ PD +WSG TG V A + + + V
Sbjct: 245 AGLYLDDLARSWESTLPGFRYVPVLSESGPDDSWSGRTGLVHHAV--MQDLPDLSVHEVY 302
Query: 265 LCGQKQMAEEVTSIVLAE 282
CG M + ++AE
Sbjct: 303 ACGAPAMIDAARRDLVAE 320
>gi|94312562|ref|YP_585771.1| multidomain oxidoreductase [Cupriavidus metallidurans CH34]
gi|93356414|gb|ABF10502.1| multidomain oxidoreductase, (2Fe-2S) and FAD/NAD(P)-binding
(antC-like) [Cupriavidus metallidurans CH34]
Length = 334
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 19/233 (8%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I+ + H+ + +SD A GQY+++ + D +F ++AS P+
Sbjct: 108 ITSLGPDVLHLRLALSDDEAFA---FEPGQYMKILLEDGSHRSF-SMASAPN----GNTV 159
Query: 124 EFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
+F V+ +AG T L L+ GD +++ G F++ + ++Y +L+ ATG+G++
Sbjct: 160 DFHVRQIAGGRFTTGQLPQLRPGDKLDVEVPHG-SFSLRK----EDYRPLLMVATGTGLA 214
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWS 239
PI+S++E+ + V LY+G R+ + D+ W + VPVLS+ D W
Sbjct: 215 PIKSMLEALMDDPDCPPVWLYWGMRSAADLYLHDEIARWGERLYDFQYVPVLSRADDTWQ 274
Query: 240 GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G GYV A A I + + LCG M + + G + I +
Sbjct: 275 GRRGYVHDAV--AADIGDLSEHAIYLCGSPNMIHDAKQTFMVLGAQAPFIYSD 325
>gi|430807861|ref|ZP_19434976.1| multidomain oxidoreductase [Cupriavidus sp. HMR-1]
gi|429499831|gb|EKZ98231.1| multidomain oxidoreductase [Cupriavidus sp. HMR-1]
Length = 334
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+++ + D +F ++AS P+ +F V+ +AG T L L+ GD +++
Sbjct: 133 GQYMKILLEDGSHRSF-SMASAPN----GNTVDFHVRQIAGGRFTTGQLPQLRPGDKLDV 187
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G F++ + ++Y +L+ ATG+G++PI+S++E+ + V LY+G R+
Sbjct: 188 EVPHG-SFSLRK----EDYRPLLMVATGTGLAPIKSMLEALMDDPDCPPVWLYWGMRSAA 242
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ D+ W + VPVLS+ D W G GYV A A I N + LCG
Sbjct: 243 DLYLHDEIARWGERLYDFQYVPVLSRADDAWQGRRGYVHDAV--AADIGNLSEHAIYLCG 300
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M + + G + I +
Sbjct: 301 SPNMIHDAKQTFMVLGAQAPFIYSD 325
>gi|167835756|ref|ZP_02462639.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis MSMB43]
gi|424902454|ref|ZP_18325970.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis MSMB43]
gi|390932829|gb|EIP90229.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis MSMB43]
Length = 343
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGARRSYSMATAP----HEEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ +G F ++ + P VL+ A+G+G +PI+++IE +K + LY+GAR
Sbjct: 190 LEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHAHHAKLERPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDAAEQWAKEIPNFKFVPVLSEPDASDAWAGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|413963417|ref|ZP_11402644.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. SJ98]
gi|413929249|gb|EKS68537.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. SJ98]
Length = 343
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST--AEVLCGLKKGDVVE 148
AGQY++ + D GK ++ASPP G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKD-GKRRSYSMASPPHH---EGPLELHIRHMPGGTFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F D P +++ A+G+G +PI+++IE + LY+G R
Sbjct: 190 FEGPLGTFFLRDESDKP-----IVLLASGTGFAPIKAIIEHAVFKNLNRPMTLYWGGRRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDLYMMSLAEQWAREVPNFKFVPVLSEPDAGDAWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|311103527|ref|YP_003976380.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter xylosoxidans A8]
gi|310758216|gb|ADP13665.1| 2Fe-2S iron-sulfur cluster binding domain protein 3 [Achromobacter
xylosoxidans A8]
Length = 335
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D G+ ++AS P A G +F V+ + G T + L + G VEI
Sbjct: 132 GQYMNVVLPD-GETRSFSMASAP----AGGLVDFHVRRIPGGRYTDQWLGQAQAGAGVEI 186
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G V D P +++ ATG+GI+PI++++ES +++ V LY+G R
Sbjct: 187 EAPLG----VFSYHEEDWRPLIMM-ATGTGIAPIKAILESLLDNEDCPPVTLYWGMRTEA 241
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ ++ + W VPVLS+ D +W G G+VQ A + + LCG
Sbjct: 242 DLYLREVIESWAGRLYEFNFVPVLSRADADWLGRRGHVQQAVLEDHQDLSEH--AFYLCG 299
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
+M E S++ A G S + + +
Sbjct: 300 APEMIREAKSLLAARGASLDHMYSD 324
>gi|220915913|ref|YP_002491217.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219953767|gb|ACL64151.1| oxidoreductase FAD/NAD(P)-binding domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 235
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
I ++ P +A +H GQ +++R G+ F A+AS PS + L+K
Sbjct: 24 GIRLALPPALARAHRAPGQVVKVRT-PAGE-GFFALASAPS---PDAVVDLLLKRGGKVA 78
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
+ G + +++ G+GF V+ D VL+FA GSGI+PIR++++ + +
Sbjct: 79 DAAIAAAAPGATLALTEPFGKGFPVEEAAGRD----VLLFAAGSGIAPIRAVVQHVLAHR 134
Query: 195 ER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ-AAFSRA 252
+ L+YG R+ AY+ + WE GV++V S D W G G VQ A A
Sbjct: 135 DAFRRATLFYGQRHGAEFAYRAEHVAWERGGVRVVLCPSGEDDAWPGVRGRVQEVARVLA 194
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
P+ T + G M ++V ++ G+ +++ NF
Sbjct: 195 FGGTPPEETVAFVSGMTAMVDDVRRVLAGAGIPPQRVFANF 235
>gi|402570142|ref|YP_006619486.1| oxidoreductase FAD/NAD(P)-binding protein [Burkholderia cepacia
GG4]
gi|402251339|gb|AFQ51792.1| oxidoreductase FAD/NAD(P)-binding protein [Burkholderia cepacia
GG4]
Length = 354
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 115/271 (42%), Gaps = 28/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVW----TPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A Q TV P AEI P + V+ P I
Sbjct: 61 PFALMDFEREEGKALACCATLQADTVIEADVDEEPDAEIIPVRDFAADVTRIEPLTPTIK 120
Query: 86 SS--------HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
S H +AGQY+QL + +G+ +IA+ P+ +A+G E V+ V G T
Sbjct: 121 SIRLKLSQPIHFQAGQYVQLEIPGLGQSRAFSIANAPADVAATGEIELNVRQVPGGLGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L GD V +S GR F P ++ A GSG+S RS+I +S
Sbjct: 181 YLHEQLATGDRVRLSGPYGRFFVRRSAARP-----MIFMAGGSGLSSPRSMIADLLASGV 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
+ + L YG R+ K + Y D+F+ VP LS+ PDGN G+V
Sbjct: 236 TAPITLVYGQRSAKELYYHDEFRALAERHPNFTYVPALSEGGPDGNGGVAQGFVHDV--- 292
Query: 252 AKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
AK F+ +G LCG M + + ++
Sbjct: 293 AKAHFDGDFSGHQAYLCGPPAMIDACITTLM 323
>gi|255022250|ref|ZP_05294244.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Acidithiobacillus caldus
ATCC 51756]
gi|340783361|ref|YP_004749968.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Acidithiobacillus caldus
SM-1]
gi|254968306|gb|EET25874.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Acidithiobacillus caldus
ATCC 51756]
gi|340557512|gb|AEK59266.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Acidithiobacillus caldus
SM-1]
Length = 336
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D + F ++A+ P+ A G E +K V G T++V +K+ D++
Sbjct: 135 GQYIDILLKDGARRGF-SLANTPN---ADGILELHIKRVPGGRFTSQVFEQMKEKDILRF 190
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + P +L+ ATG+G +PI+ +++ ++ ++LY+G R+ +
Sbjct: 191 EGPLGTFFIREESTRP-----LLMAATGTGFAPIKGMLQWLLEHGQQRPIQLYWGVRHPQ 245
Query: 210 RMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
Y+ +EW S + ++S+PD W+G GY+ + +P +CG
Sbjct: 246 DFYYEALLQEWTQAFSDFTVHKIVSRPDAQWTGARGYITEHI--LQDFPDPSEFDAYICG 303
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M + + A G+ +E I +
Sbjct: 304 HPDMVFSLADRLRAAGLDAEHIFAD 328
>gi|419964294|ref|ZP_14480251.1| cytochrome P450, reductase [Rhodococcus opacus M213]
gi|432334354|ref|ZP_19586043.1| cytochrome P450, reductase [Rhodococcus wratislaviensis IFP 2016]
gi|414570119|gb|EKT80855.1| cytochrome P450, reductase [Rhodococcus opacus M213]
gi|430778731|gb|ELB93965.1| cytochrome P450, reductase [Rhodococcus wratislaviensis IFP 2016]
Length = 331
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++LRV ++A+ P S EF ++ G A V L G+ V
Sbjct: 131 AGQYVELRVPGTDHRRQYSMANTPG---ESKQLEFHIRRQPGGIATDGWVFGSLSVGERV 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G R+ P DE P +L+ G+G++P++S++ + + LY+G R
Sbjct: 188 DMVGPLGDF----RLDPEDEGPMILL-GGGTGLAPLKSIVHQALTVAPDRAIHLYHGVRE 242
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D F+EWE + G + VP LS D +WSG +GYV AF + +G L
Sbjct: 243 ESDLYDVDLFQEWERAHPGFRYVPCLS--DQSWSGRSGYVTDAF--VEDFDTCRGYSGYL 298
Query: 266 CGQKQMAE 273
CG M +
Sbjct: 299 CGPPAMVD 306
>gi|302879886|ref|YP_003848450.1| oxidoreductase FAD-binding domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302582675|gb|ADL56686.1| Oxidoreductase FAD-binding domain protein [Gallionella
capsiferriformans ES-2]
Length = 340
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ + + D KP ++A+ P E +++++G T V +K+ D++
Sbjct: 132 AGQYIDILLKD-QKPRSFSLANAPH---TDEFLELHIRNISGGAFTHHVFEEMKERDILR 187
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P ++ A+G+G +PI+++IE + + Y+GAR L
Sbjct: 188 FKGPLGTFFLREDSDKP-----IIFVASGTGFAPIKAIIEHALYIGIKRPMHFYWGARKL 242
Query: 209 KRMAYQDKFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ + K+WE+ G++ PVLS P+ +W G TG+V A
Sbjct: 243 SDLYMLEMAKQWEAQGIQFTPVLSDALPEDHWQGRTGFVHCA 284
>gi|332308772|ref|YP_004436622.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Glaciecola sp. 4H-3-7+YE-5]
gi|332176101|gb|AEE25354.1| oxidoreductase FAD/NAD(P)-binding domain protein [Glaciecola sp.
4H-3-7+YE-5]
Length = 623
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 115 SFASASGAFEFLVKS--------VAGSTAEVLCGLKKGDVVEISQVMG--RGFAVDRIQP 164
++ S + FL+K + G + +C + G+ +E +G F V Q
Sbjct: 432 NYDSHTNELTFLIKMQPAPRANLLPGFGSNYICNMLPGESIE---AIGPFEKFYVSNSQF 488
Query: 165 PDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--E 221
D T+++ GSGI+P++S+I K + ++ Y+GAR + Y++ F+ E
Sbjct: 489 -DTAKTMVMIGAGSGIAPLKSIIMEQLEKLKCQENIHFYFGARYKVDLIYRELFERLAVE 547
Query: 222 SSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIF-NPQGTGVVLCGQKQMAEEVTSIVL 280
PVLS+PD NW G GYVQ + I + LCG KQM E S++
Sbjct: 548 YQNFHFTPVLSKPDTNWDGANGYVQQVIDNSIDILGDLNQIQFYLCGPKQMMLETISMLK 607
Query: 281 AEGVSSEKI 289
GV I
Sbjct: 608 KHGVKDSAI 616
>gi|393760659|ref|ZP_10349466.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161157|gb|EJC61224.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 344
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
+ A + ++ +++ + P R GQYL + + D G+ ++A+ + A G
Sbjct: 110 VERACQGIWRLTLQL---PQDVQVQFRPGQYLNILLED-GRARSFSMANADA---AQGRI 162
Query: 124 EFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
E V+ V G T L LK GD + + +G + +R D P V++ ATG+GI+
Sbjct: 163 ELHVREVEGGRFTQVHLPALKAGDELRLELPLGVFYWRER----DWRPMVMV-ATGTGIA 217
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWS 239
PI++++ES ++ V LY+G + + + + W + VPVLS D +W
Sbjct: 218 PIKAILESLLDKEDCPPVSLYWGMNRPEDLYLAQEIESWADRLCEFRFVPVLSHADESWQ 277
Query: 240 GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
G GYVQ R + + + LCG M E+ + G + +
Sbjct: 278 GARGYVQQQVCRDEPDLSEH--AIYLCGSPVMIEQARGLFKEHGANEQ 323
>gi|335437628|ref|ZP_08560400.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halorhabdus
tiamatea SARL4B]
gi|334895316|gb|EGM33490.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halorhabdus
tiamatea SARL4B]
Length = 286
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 78 ISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV 137
+ D PD S GQ++QL V VG+ F +IAS P+ G FE +++V G+
Sbjct: 37 VIDLPDGVSLDHDPGQFVQLFVPGVGEAPF-SIASSPT---KGGPFELCIRAV-GNVTNA 91
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KER 196
+ L+ GDVV I G+GF VD I D +L A G G++P+RS+I E
Sbjct: 92 IHDLEAGDVVGIRGPYGQGFDVDAIAGED----LLFIAGGIGLAPLRSVINYALDRPGEF 147
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWESS-------GVKIVPVLSQPDGNWSGETGYVQAAF 249
++ YG + D+ + W S V VPV + W G TG + +
Sbjct: 148 GELTTLYGCTEPAEQLFPDELESWAGSEEMDYRETVDEVPVGQE----WDGNTGVITSLI 203
Query: 250 SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ F+P T ++CG M V + +G++ ++I
Sbjct: 204 PPLE--FDPDTTVALVCGPPVMYRFVIKALREKGLADDRI 241
>gi|423015199|ref|ZP_17005920.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter xylosoxidans AXX-A]
gi|338781875|gb|EGP46255.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter xylosoxidans AXX-A]
Length = 338
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D +F ++AS P A +F V+ + G T L + G +EI
Sbjct: 132 GQYMNVVLPDGATRSF-SMASAP----AGNLVDFHVRRIPGGRYTDHWLGQARPGAALEI 186
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G V D P +++ ATG+GI+PI++++ES + + V LY+G R
Sbjct: 187 EAPLG----VFSYHEEDWRPMIMM-ATGTGIAPIKAILESLLDNDDCPPVTLYWGMRTEA 241
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ +D+ W VPVLS+ D W G G+VQ A + + + LCG
Sbjct: 242 DLYLRDQIAGWAGRLYEFNFVPVLSRADAGWQGRRGHVQQAVLQDHGDLSEH--ALYLCG 299
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M E T+++ G S + + +
Sbjct: 300 APAMISEATALLAGRGASLDHVYAD 324
>gi|410694589|ref|YP_003625211.1| putative Ferredoxin--NAD(+) reductase [Thiomonas sp. 3As]
gi|294341014|emb|CAZ89409.1| putative Ferredoxin--NAD(+) reductase [Thiomonas sp. 3As]
Length = 343
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+Q + D + ++ ++AS PS S E ++ + G T V +K+ ++
Sbjct: 133 RAGQYIQFLLRDGARRSY-SMASAPS---ESPQVELHLRHMPGGKFTDHVFTAMKEKEIQ 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G F D P+ P + + A+G+G +PI++++E ++ + +V LY+G R
Sbjct: 189 RIEGPFGSFFLRD---DPENKPLIFL-ASGTGFAPIKAILEQMRTNADPREVTLYWGGRK 244
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D + ++ ++ +PVLS+PD +WSG TG+V A + + G V
Sbjct: 245 QQDLYLHDWAVQQCAAMPHLRFIPVLSEPDADWSGRTGFVHRAV--MDDVPDLSGHAVYA 302
Query: 266 CGQKQMAE 273
CG M E
Sbjct: 303 CGAPVMVE 310
>gi|359798812|ref|ZP_09301382.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter arsenitoxydans SY8]
gi|359363211|gb|EHK64938.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter arsenitoxydans SY8]
Length = 335
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + I P + + H+++ + P + GQY+ + + D G+ ++ASPP
Sbjct: 102 PATIHRIEPYGDDVIHLTLAL---PGQGMDYV-PGQYMNVVLPD-GETRSFSMASPP--- 153
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
A +F V+ + G T + L + G VEI +G V D P +++ A
Sbjct: 154 -AGNLVDFHVRRIPGGRYTDQWLGQARAGADVEIEAPLG----VFSYHEEDWRPLIMM-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
TG+GI+PI++++ES +++ V LY+G R + +D + W VPVLS+
Sbjct: 208 TGTGIAPIKAILESLLDNEDCPPVTLYWGMRTEADLYLRDVIESWVGRLYEFNFVPVLSR 267
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G G+VQ A + + + LCG +M + S++ G S + + +
Sbjct: 268 AGEGWQGRRGHVQQAVLEDHEDLSEH--AIYLCGAPEMIRQAKSLLAGRGASLDHMYAD 324
>gi|167893208|ref|ZP_02480610.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 7894]
gi|167917934|ref|ZP_02505025.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei BCC215]
gi|217419832|ref|ZP_03451338.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 576]
gi|217397136|gb|EEC37152.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 576]
Length = 343
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGARRSYSMATAP----HEEGPIELHIRHMPGGKFTDHVFGPMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE K + + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHAHHVKLKRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDAAEQWAKEIPNFKFVPVLSEPDASDAWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|21674704|ref|NP_662769.1| hydrogenase/sulfur reductase subunit gamma [Chlorobium tepidum TLS]
gi|21647912|gb|AAM73111.1| hydrogenase/sulfur reductase, gamma subunit [Chlorobium tepidum
TLS]
Length = 274
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ I P +E + I D + R GQ+L L V G+ +P S +SA+
Sbjct: 11 ITNIVPLSEHEKLFQLRIVDPRERELFTFRPGQFLMLEVPGYGE-------APISISSAT 63
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
EF+ + AG L K+G V + G F ++ +Q D VL+ A G
Sbjct: 64 SNREFIELCIRKAGHVTSALFEAKQGAFVAVRGPFGTSFPMEAMQDHD----VLLIAGGL 119
Query: 179 GISPIRS-LIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDG 236
GI+P+R+ L +V YGA+ +M + +F+EW++ S + + ++ +PD
Sbjct: 120 GIAPLRAPLFWINDHRDHYRNVSFLYGAKEPSQMLFTYQFEEWKTVSHIDLHTIVEKPDD 179
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
W+G TG + F +P+ T ++CG M + V + + G+ ++
Sbjct: 180 QWTGRTGMITLLFDEIT--IDPKNTWAIVCGPPVMFKFVCTHLDKLGIPMNRMF 231
>gi|121609740|ref|YP_997547.1| FAD/NAD(P)-binding oxidoreductase subunit [Verminephrobacter
eiseniae EF01-2]
gi|121554380|gb|ABM58529.1| oxidoreductase FAD/NAD(P)-binding domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 354
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGD 145
H +AGQY+QL + +G+ +IA+ P+ ASG E V+ VAG T + LK GD
Sbjct: 131 HFQAGQYVQLEIPGLGQSRAFSIANAPAEVQASGEIELNVRIVAGGAGTGYLHEKLKAGD 190
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+ +S GR F + Q P +L A GSG+S R++I + L YG
Sbjct: 191 RLRLSGPYGRFFVRESAQLP-----MLFMAGGSGLSSPRAMILDLLGKGCTQPITLVYGQ 245
Query: 206 RNLKRMAYQDKFK---EWESSGVKIVPVLSQPDG-NWSGETGYVQAAFSRAKKIFNPQGT 261
R+ + Y +F+ + + + + +P+G +WSG G+V A AK F PQG
Sbjct: 246 RSRDELYYDAEFRALVQRHPNFTYVAALSHEPEGTDWSGARGFVHEA---AKAHF-PQGF 301
Query: 262 G---VVLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 302 AGHKAYLCGPPPMIEACIAALM 323
>gi|377556128|ref|ZP_09785851.1| oxidoreductase FAD/NAD(P)-binding subunit [endosymbiont of
Bathymodiolus sp.]
Length = 337
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 20/232 (8%)
Query: 69 ESLFHVSIDISDA----PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+S+ H++ D++ P+ S AGQY+ L D +P +IA+ P +G E
Sbjct: 108 QSIEHLNHDVTQIFLKIPNAESLQYLAGQYIDLIHPDF-EPRAFSIANAPD---NNGLIE 163
Query: 125 FLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
V+ + G T V L++ ++++ G F + + P V++ A G+G +P
Sbjct: 164 LHVRLIEGGKFTNFVFNQLREKSLLKLEGPKGDFFFREDSKKP-----VILMAGGTGFAP 218
Query: 183 IRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSG 240
I+S++E ++K + +Y+GAR+ + Y D ++W E+ + VPVLSQP+ +W G
Sbjct: 219 IKSIVEHAIATKLDRAIYIYWGARDEVDL-YMDLPQQWANENDNIYFVPVLSQPNKDWQG 277
Query: 241 ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G+V A + G V CG +M + + +G+ + +
Sbjct: 278 RKGFVHEAI--LGDFEDLTGYEVYACGPPKMVKSAAKSFVEQGMIQDNFFSD 327
>gi|357385672|ref|YP_004900396.1| 2-polyprenylphenol hydroxylase/CDP-6-deoxy-delta-3,4-glucoseen
reductase-like protein [Pelagibacterium halotolerans B2]
gi|351594309|gb|AEQ52646.1| 2-polyprenylphenol hydroxylase and related flavodoxin
oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen
reductase-like protein [Pelagibacterium halotolerans B2]
Length = 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 27/233 (11%)
Query: 57 TPTPLAEISPAAESLFHVSID--ISDAPDIASSHTR----------AGQYLQLRVVDVGK 104
TP + ++ P + + + APD+A H R AGQYL++ + D
Sbjct: 84 TPARIQKVEPVQRKILDAKVRKIVRPAPDVAVIHVRLPIGQRAPFRAGQYLRVMMEDDDS 143
Query: 105 PTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRI 162
+ ++A+PP + E ++ V G + +VL ++KG V+ + G D
Sbjct: 144 RNY-SMANPPQ---KNDGIELHIRHVPGGKFSEQVLGTMEKGTVLRVELPYGEFCLSDE- 198
Query: 163 QPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES 222
D VL+ ATG+G +PI+SLIE+ + ++LY+G + D ++W
Sbjct: 199 ---DGMDAVLL-ATGTGFAPIKSLIENQIALGAERPLKLYWGVNTEADLYMGDVAEQWAK 254
Query: 223 --SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
S + +PV+S P +W G TG+V A + I + V CG M +
Sbjct: 255 TYSWITFIPVISSPSQDWQGRTGFVHQAV--LEDIADMSNVEVYACGAPVMID 305
>gi|390574844|ref|ZP_10254955.1| putative flavodoxin oxidoreductase [Burkholderia terrae BS001]
gi|420254998|ref|ZP_14757960.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
gi|389933203|gb|EIM95220.1| putative flavodoxin oxidoreductase [Burkholderia terrae BS001]
gi|398047162|gb|EJL39728.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
Length = 328
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYLQ+ + D + + ++A+ P S + + V+ V G + VL + KGD +
Sbjct: 129 AGQYLQIELEDGTRRNY-SMANAPH---ESDSVQLHVRHVPGGRFSEGVLGRIAKGDRLR 184
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F ++ + P VL+ ATG+G +P++S++E + + LY+GAR
Sbjct: 185 IELPFGE-FT---LREGSDRPAVLL-ATGTGFAPVKSIVEDAIKRRLERPLHLYWGARRA 239
Query: 209 KRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + ++W SG VK VPVLS+ D W+G G+V A + + G V CG
Sbjct: 240 EDLYLAALAQKWHDSGRVKFVPVLSEADEAWTGRRGFVHEAV--LEDFGSLAGYEVYACG 297
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M + + G+ + +
Sbjct: 298 NPSMTSAAHNTFVKAGLPEDDFFSD 322
>gi|53718569|ref|YP_107555.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei K96243]
gi|53725931|ref|YP_103557.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia mallei ATCC
23344]
gi|67643833|ref|ZP_00442576.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
(CDP-6-deoxy-delta-3,4-glucoseen reductase) (E3)
[Burkholderia mallei GB8 horse 4]
gi|76811067|ref|YP_332563.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1710b]
gi|121601344|ref|YP_992287.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia mallei
SAVP1]
gi|124384933|ref|YP_001026868.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia mallei NCTC
10229]
gi|126441021|ref|YP_001058041.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 668]
gi|126449814|ref|YP_001079845.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia mallei NCTC
10247]
gi|126454941|ref|YP_001065278.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1106a]
gi|166999980|ref|ZP_02265809.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei PRL-20]
gi|167718480|ref|ZP_02401716.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei DM98]
gi|167737530|ref|ZP_02410304.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 14]
gi|167814649|ref|ZP_02446329.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 91]
gi|167823117|ref|ZP_02454588.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 9]
gi|167844680|ref|ZP_02470188.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei B7210]
gi|167901662|ref|ZP_02488867.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei NCTC 13177]
gi|167909912|ref|ZP_02497003.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 112]
gi|226194525|ref|ZP_03790123.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei Pakistan 9]
gi|237811192|ref|YP_002895643.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei MSHR346]
gi|242315328|ref|ZP_04814344.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 1106b]
gi|254175324|ref|ZP_04881984.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
mallei ATCC 10399]
gi|254181473|ref|ZP_04888070.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1655]
gi|254190861|ref|ZP_04897368.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|254196397|ref|ZP_04902821.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei S13]
gi|254202243|ref|ZP_04908606.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei FMH]
gi|254207576|ref|ZP_04913926.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei JHU]
gi|254258186|ref|ZP_04949240.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1710a]
gi|386862653|ref|YP_006275602.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1026b]
gi|403517650|ref|YP_006651783.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei BPC006]
gi|418397848|ref|ZP_12971505.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 354a]
gi|418534402|ref|ZP_13100245.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1026a]
gi|418541729|ref|ZP_13107197.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1258a]
gi|418548056|ref|ZP_13113182.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1258b]
gi|418554169|ref|ZP_13118965.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 354e]
gi|52208983|emb|CAH34922.1| putative oxidoreductase [Burkholderia pseudomallei K96243]
gi|52429354|gb|AAU49947.1| CDP-6-deoxy-delta-3,4-glucoseen reductase, putative [Burkholderia
mallei ATCC 23344]
gi|76580520|gb|ABA49995.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehy drase reductase
[Burkholderia pseudomallei 1710b]
gi|121230154|gb|ABM52672.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
mallei SAVP1]
gi|124292953|gb|ABN02222.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
mallei NCTC 10229]
gi|126220514|gb|ABN84020.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 668]
gi|126228583|gb|ABN92123.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 1106a]
gi|126242684|gb|ABO05777.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
mallei NCTC 10247]
gi|147746490|gb|EDK53567.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei FMH]
gi|147751470|gb|EDK58537.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei JHU]
gi|157938536|gb|EDO94206.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei Pasteur 52237]
gi|160696368|gb|EDP86338.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
mallei ATCC 10399]
gi|169653140|gb|EDS85833.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei S13]
gi|184212011|gb|EDU09054.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1655]
gi|225933610|gb|EEH29599.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei Pakistan 9]
gi|237505090|gb|ACQ97408.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
(CDP-6-deoxy-delta-3,4-glucoseen reductase) (E3)
[Burkholderia pseudomallei MSHR346]
gi|238525273|gb|EEP88701.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
(CDP-6-deoxy-delta-3,4-glucoseen reductase) (E3)
[Burkholderia mallei GB8 horse 4]
gi|242138567|gb|EES24969.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 1106b]
gi|243064095|gb|EES46281.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia mallei PRL-20]
gi|254216875|gb|EET06259.1| putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1710a]
gi|385357161|gb|EIF63232.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1258a]
gi|385358720|gb|EIF64704.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1258b]
gi|385359304|gb|EIF65271.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1026a]
gi|385367685|gb|EIF73179.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 354a]
gi|385370663|gb|EIF75897.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 354e]
gi|385659781|gb|AFI67204.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei 1026b]
gi|403073293|gb|AFR14873.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
pseudomallei BPC006]
Length = 343
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGARRSYSMATAP----HEEGPIELHIRHMPGGKFTDHVFGPMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE K + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHAHHVKLERPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDAAEQWAKEIPNFKFVPVLSEPDASDAWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|339444774|ref|YP_004710778.1| 2-polyprenylphenol hydroxylase [Eggerthella sp. YY7918]
gi|338904526|dbj|BAK44377.1| 2-polyprenylphenol hydroxylase [Eggerthella sp. YY7918]
Length = 303
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
T + E++ A E LF + I + A H GQ++++ + VG+ A S S S
Sbjct: 41 TSIVELT-ATEKLFEFRL-IDERIREAFRH-EPGQFVEVSIFGVGE----APISISSSPS 93
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G E V+ G+ EVL ++ GD+V + GRGF + ++ D +L+ A G
Sbjct: 94 KHGFIELCVRR-TGAFTEVLHTMQCGDIVGLRGPFGRGFPFEEMKGHD----ILLVAGGL 148
Query: 179 GISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDG 236
GI+P+RSLI + + E +V + YG++N + ++ +F+ W + + PD
Sbjct: 149 GIAPLRSLINNIHDERSEFGNVTIIYGSKNPSEVMFRQQFEMWRHRKDFDLYLTVDHPDA 208
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
W GE G V F + T +CG M V + + +S + I +F
Sbjct: 209 TWDGEVGLVTKPFEHLD--IDATNTFGAVCGPPVMYRFVIDEMRKKNISYDHIYVSF 263
>gi|424776764|ref|ZP_18203740.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Alcaligenes sp. HPC1271]
gi|422888057|gb|EKU30449.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Alcaligenes sp. HPC1271]
Length = 344
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
R GQYL + D +F S + +A G E V+ V G +C LK GD +
Sbjct: 133 RPGQYLNILFEDGHARSF----SMANADAAQGRIELHVREVEGGRFTQVCLPTLKAGDEL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G + +R D P V++ ATG+GI+PI++++ES + V LY+G
Sbjct: 189 LLELPLGVFYWRER----DWRPMVMV-ATGTGIAPIKAILESLLDKDDCPPVSLYWGMNR 243
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + + W + VPVLS D +W G GYVQ R + + + L
Sbjct: 244 PEDLYLAQEIESWAERLCEFRFVPVLSHADESWQGARGYVQQQVCRDEPDLSEH--AIYL 301
Query: 266 CGQKQMAEEVTSIVLAEGVSSE 287
CG M E+ + G + +
Sbjct: 302 CGSPVMIEQARGLFKEHGANEQ 323
>gi|83718430|ref|YP_441348.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis E264]
gi|167582950|ref|ZP_02375824.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis TXDOH]
gi|167618198|ref|ZP_02386829.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
thailandensis Bt4]
gi|83652255|gb|ABC36318.1| CDP-6-deoxy-delta-3,4-glucoseen reductase, putative [Burkholderia
thailandensis E264]
Length = 343
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGTRRSYSMATAP----HEEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE K + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHAHHVKLARPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDAAEQWAKEIPNFKFVPVLSEPDASDAWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|392552623|ref|ZP_10299760.1| ferredoxin-NADP reductase [Pseudoalteromonas spongiae
UST010723-006]
Length = 246
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 17/209 (8%)
Query: 90 RAGQYLQLRVVDVGKPT---FLAIASPPSFASASGAFEFLVKSVA-GSTAEVLCGLKKGD 145
+AGQ+ +L + K + + +PP+ + EFL+ +V G + L LKKGD
Sbjct: 32 KAGQFTKLAMTIEDKKVARAYSFVNTPPN----NNLHEFLLVTVEDGLLSPPLSDLKKGD 87
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++I++ F +D + D T+ + ATG+ I P S++ G ++ V L +G
Sbjct: 88 TLQIAEQASGFFTLDEVPESD---TLWLLATGTAIGPFLSMLGDGAIWQKYKHVVLVHGV 144
Query: 206 RNLKRMAYQDKFKEWESSG-VKIVPVLSQ---PDGNWSGETGYVQAA--FSRAKKIFNPQ 259
RN + YQ + + S+ + VPV+SQ PDG T + + FS + PQ
Sbjct: 145 RNHTDLVYQQQICDLCSNHPLTFVPVISQEEWPDGLQGRITNAITSGELFSHVEVTPTPQ 204
Query: 260 GTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+ +LCG +M +E T ++L G + +
Sbjct: 205 NSQFMLCGNPEMVKETTQLLLDLGFTRNR 233
>gi|193211990|ref|YP_001997943.1| Oxidoreductase FAD-binding domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085467|gb|ACF10743.1| Oxidoreductase FAD-binding domain protein [Chlorobaculum parvum
NCIB 8327]
Length = 305
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 23/269 (8%)
Query: 26 LRRIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIA 85
L R P P + + L + PL+E E LF + I D + A
Sbjct: 13 LNREPFARTSPDFGKKSELMVTDHGYKCRITNIVPLSE----HEKLFQLRI--VDPHERA 66
Query: 86 SSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKK 143
R GQ+L L V G+ +P S +SA+ EF+ + AG L K+
Sbjct: 67 LFTFRPGQFLMLDVPGYGE-------APISISSATSNREFIELCIRKAGHVTSALFEAKQ 119
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESGFSSKERSDVRLY 202
G + + G F ++ +Q D VL+ A G GI+P+R+ L +V
Sbjct: 120 GAFIAVRGPFGTSFPMEAMQDSD----VLLIAGGLGIAPLRAPLFWINDHRDHYRNVSFL 175
Query: 203 YGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
YGA+ +M + +F+EW++ S + + ++ +P W+G TG + + F +P+ T
Sbjct: 176 YGAKEPSQMLFTYQFEEWKTVSHIDLHTIVEKPSDEWTGRTGMITSLFDDIT--IDPKNT 233
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++CG M + V + + G+ ++
Sbjct: 234 WAIVCGPPVMFKFVCTHLDKLGIPMNRMF 262
>gi|407365503|ref|ZP_11112035.1| ferredoxin--NAD(+) reductase [Pseudomonas mandelii JR-1]
Length = 240
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQYL++ + D G ++A+PP S + ++ V G + VL GL+KG +
Sbjct: 32 QAGQYLKVLMED-GDSRNYSMANPPH---ESDGVQLHIRHVPGGRFSEGVLAGLEKGHAL 87
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F++D ++P +L+ TG+G++P++S+IE + LY+GARN
Sbjct: 88 TVELPYGE-FSLDEEV---DHPVILL-GTGTGMAPLKSIIEDQIKRGGSRPMHLYWGARN 142
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D +W PVLS+P+ WSG TG+V + V
Sbjct: 143 SQDLYLADLPAQWAKRLPAFIFTPVLSEPEPGWSGRTGWVHRTVLEDYPDLSAH--QVYA 200
Query: 266 CGQKQMAEEVTSIVLAEG 283
CG M + + AEG
Sbjct: 201 CGNPIMTTAALNDLTAEG 218
>gi|331693965|ref|YP_004330204.1| ferredoxin--NAD(+) reductase [Pseudonocardia dioxanivorans CB1190]
gi|326948654|gb|AEA22351.1| Ferredoxin--NAD(+) reductase [Pseudonocardia dioxanivorans CB1190]
Length = 335
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
RAGQ+L++R+ +P ++A+PP A+ + V++ G L L+ GD +
Sbjct: 129 RAGQFLEVRLPGA-EPRPYSLANPPQHNDAA---QLHVRTEPGGLFSDLTVGALEPGDTL 184
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+ G F +D P VL+ ATG+G +P RS++ + + V LY+G R
Sbjct: 185 EVETPFGE-FVLDDGDSP-----VLLLATGTGFAPFRSIVLDLIARRRTRPVHLYWGVRT 238
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ ++ + W PVLS+P +W+G TG+VQ A A V
Sbjct: 239 EDDLYLAEQPRRWAERHPWFTFTPVLSRPGRDWAGMTGHVQHAALTAHPDLTAH--HVYA 296
Query: 266 CGQKQMAEEVTSIVLAE-GVSSEK 288
CG + M +++ + G++SE+
Sbjct: 297 CGGEAMTAGTHALLTSRAGLASER 320
>gi|406914349|gb|EKD53543.1| hypothetical protein ACD_61C00019G0009 [uncultured bacterium]
Length = 235
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEIS 150
GQY L+V + G ++AS P+ A + LV G ++ + GLK GD VE+
Sbjct: 36 GQYASLKVTEEGLRRSYSVASLPN----EKAIDLLVDVTPMGVGSKYILGLKVGDEVEVL 91
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE-RSDVRLYYGARNLK 209
+GR F +D + E +L ATG+GI+P + +IE K ++VRL +G R+ +
Sbjct: 92 AFLGR-FTIDPMLLF-EAKHILFLATGTGIAPFKPMIEDLLYRKHFANEVRLVWGMRHPE 149
Query: 210 RMAYQDKFKEWES-----SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
++ + KE ++ K V+S+P +W G TG++ A + K+ ++ T V
Sbjct: 150 KLYW---LKEMDNINRDFDNFKHDIVISRPTEDWPGLTGHIDVAVDKLKQDWSK--TLVY 204
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
LCG M E+ + +GV I
Sbjct: 205 LCGAPDMITEMEKNLKEKGVPENHIF 230
>gi|359449058|ref|ZP_09238560.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20480]
gi|358045127|dbj|GAA74809.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20480]
Length = 616
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 91/224 (40%), Gaps = 22/224 (9%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKS--------VAGS 133
PD H R +YL+ + LA + + +F VK G
Sbjct: 393 PDAFKYHWRDIEYLEYEHQACSRSYSLA-NGDGQIEAGTNELKFTVKIQNAPNKSIYPGV 451
Query: 134 TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES--GF 191
+ +C L G +E + G D P T+++ GSG++P++SLIE F
Sbjct: 452 GSSYICNLGLGQTIEAA-----GPFEDFHAKPSSNKTMILIGAGSGMAPLKSLIEEQLCF 506
Query: 192 SSKERSDVR---LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQ 246
KER + R +YGAR + + Y+D+ PVLS+P NWSG GYVQ
Sbjct: 507 YQKERKETRGIYFFYGARTEEDLLYKDELYRLSRKYPNFFYYPVLSRPHKNWSGAKGYVQ 566
Query: 247 AAF-SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
S KI G LCG M +++ + V + I
Sbjct: 567 DLLTSNINKICQIDGVEFYLCGPPNMMSATINLLKTKNVDATNI 610
>gi|257791007|ref|YP_003181613.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Eggerthella lenta DSM 2243]
gi|317488278|ref|ZP_07946844.1| sulfite reductase [Eggerthella sp. 1_3_56FAA]
gi|325830819|ref|ZP_08164203.1| putative sulfite reductase, subunit B [Eggerthella sp. HGA1]
gi|257474904|gb|ACV55224.1| oxidoreductase FAD/NAD(P)-binding domain protein [Eggerthella lenta
DSM 2243]
gi|316912618|gb|EFV34161.1| sulfite reductase [Eggerthella sp. 1_3_56FAA]
gi|325487226|gb|EGC89669.1| putative sulfite reductase, subunit B [Eggerthella sp. HGA1]
Length = 303
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 68 AESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV 127
E LF + I + A SH GQ++++ + VG+ A S S S G E V
Sbjct: 49 TEKLFEFRL-IDERIRDAFSH-EPGQFVEVSIFGVGE----APISISSSPSKRGFIELCV 102
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+ G EVL ++ GD+V + GRGF + ++ D +L+ A G GI+P+RSLI
Sbjct: 103 RR-TGHFTEVLHKMQCGDIVGLRGPFGRGFPFEDMKGHD----ILLVAGGLGIAPLRSLI 157
Query: 188 ESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYV 245
+ + E V + YG++N + ++ +F+ W + + PD W GE G V
Sbjct: 158 NNIHDERSEFGKVTIIYGSKNPSEVMFRQQFEMWRHRKDFDLYLTVDHPDDTWDGEVGLV 217
Query: 246 QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
F + + T LCG M + +G+S + I +F
Sbjct: 218 TKPFEHLE--IDAANTFGALCGPPVMYRFAIDEMRKKGISYDHIYVSF 263
>gi|167561882|ref|ZP_02354798.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
oklahomensis EO147]
gi|167569102|ref|ZP_02361976.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
oklahomensis C6786]
Length = 343
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ +AG T V +K+ D++
Sbjct: 134 AGQYIEFILKDGTRRSYSMATAPHD----EGPIELHIRHMAGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE K + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHAHHLKLGRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E + VPVLS+PD + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDIAEQWAKEIPNFEFVPVLSEPDASDAWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|302337131|ref|YP_003802337.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Spirochaeta smaragdinae DSM 11293]
gi|301634316|gb|ADK79743.1| oxidoreductase FAD/NAD(P)-binding domain protein [Spirochaeta
smaragdinae DSM 11293]
Length = 367
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 31/255 (12%)
Query: 49 VRQDTTVWTPTPL----------AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLR 98
V++D ++ P L A+I + V+ D+++ +I+ RAGQ++QLR
Sbjct: 114 VKEDMSIRIPDELFSVKEFQATVAKIRDLTHDIKEVTFDLNEPSEIS---IRAGQFVQLR 170
Query: 99 VVD---VGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVM 153
V + +P + A S S S E ++ V T V LK+GD V +
Sbjct: 171 VPEYELTDEPVYRAY-SAASVPSDKRHVELEIRYVPNGICTTFVHKYLKEGDPVVFNGPY 229
Query: 154 GRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAY 213
G F D + ++ A GSG++PI+S++ R ++GAR+ + +
Sbjct: 230 GEFFLRDTER------EIICIAGGSGMAPIKSILLDMAEKGSNRRTRYFFGARSKRDLFL 283
Query: 214 QDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
D+ KE E + +P LS +P+ NW GETG + AK + + T LCG
Sbjct: 284 LDEMKELEERLPNFRFIPALSAPEPEDNWDGETGLITDVV--AKHMESGDNTEAYLCGSP 341
Query: 270 QMAEEVTSIVLAEGV 284
M + ++ +GV
Sbjct: 342 GMIDACVKVLTDKGV 356
>gi|445495332|ref|ZP_21462376.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp.
HH01]
gi|444791493|gb|ELX13040.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp.
HH01]
Length = 342
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D GK ++ASPP ++ + G T +V +K+ D++
Sbjct: 133 RAGQYIEFMLRD-GKRRSYSLASPPD---QDQPLSLHIRHMPGGLFTDQVFSTMKERDIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
MG F ++ + P VL+ A+G+G +PI+++IE + + + LY+G R
Sbjct: 189 RFEGPMGTFF----VREDSDKPMVLL-ASGTGFAPIKAIIEHLRAQDSKRPMVLYWGGRR 243
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + ++WE+ VPV+S QP+ NW+G TG+V AA + + G V
Sbjct: 244 PQDLYMDALCRQWEAILPNFSYVPVISAAQPEDNWTGRTGFVHAAV--MADLPDLSGHQV 301
Query: 264 VLCG 267
CG
Sbjct: 302 YACG 305
>gi|183980162|ref|YP_001848453.1| oxidoreductase [Mycobacterium marinum M]
gi|443488606|ref|YP_007366753.1| oxidoreductase [Mycobacterium liflandii 128FXT]
gi|183173488|gb|ACC38598.1| oxidoreductase [Mycobacterium marinum M]
gi|442581103|gb|AGC60246.1| oxidoreductase [Mycobacterium liflandii 128FXT]
Length = 340
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVE 148
RAGQY + +D G+ ++ +PPS A F +K V G +VL ++ G +
Sbjct: 134 RAGQYAEF-TLDSGERRSYSLVNPPSSARE---LTFCIKRVPNGLFNKVLDRIEPGSTLH 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G F D P V+ ATGSGI+PI S++ R YYGAR +
Sbjct: 190 LEAPFGTMFLRDTEHP------VIAVATGSGIAPILSMLTDAAEQHPDVPFRFYYGARFV 243
Query: 209 KRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + Y D+ + + +P LSQ PD +G +G V A A I +
Sbjct: 244 RDLVYLDEIAALSTRLKDFRFIPCLSQQAPDPVPNGRSGRVTRAI--ATDIRDASPYAAY 301
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG +M +V ++ A+G+ +I
Sbjct: 302 LCGAPEMCNDVGRLLEAKGLPEARI 326
>gi|74318581|ref|YP_316321.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Thiobacillus
denitrificans ATCC 25259]
gi|74058076|gb|AAZ98516.1| NAD(P)H-flavin reductase [Thiobacillus denitrificans ATCC 25259]
Length = 345
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ ++ D G+ ++A+ P E ++ V G T +V LK+ D++
Sbjct: 134 AGQYIDFQLKD-GRTRSYSLANAPH---DDALLELHIRHVPGGLFTDQVFTTLKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ +G F I+ + P + + A G+G +PI+S++E F++ ++ LY+GAR
Sbjct: 190 LKGPLGSFF----IREDSDKPMIFV-AGGTGFAPIKSMLEHAFATHTDRELVLYWGARAR 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
K + + ++W E +PVLSQ PD W G TG+V A
Sbjct: 245 KDLYLAELPQQWLAERPNFSFIPVLSQAEPDDAWQGRTGFVHEA 288
>gi|168001771|ref|XP_001753588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695467|gb|EDQ81811.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 388
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 168 YPTVLIFATGSGISPIRSLIES------GFSSKERSDVRLYYGARNLKRMAYQDKFKEWE 221
+PT++ FA G G++ R+++E+ S R +VRL+ A +AYQ+KF +WE
Sbjct: 255 FPTIVFFARGRGLAVARAIVEAIDGDVGSMSLSFREEVRLFCSASKPSELAYQEKFADWE 314
Query: 222 SSGVKIVPVLSQPDG-NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
S VK+ + G W G G ++ + ++P T ++C +++ +E+T ++
Sbjct: 315 SRSVKVRATVDDAAGEEWQGAVGSFRSLWDEDDLEYDPNTTAAIVCVEEESRKELTELLE 374
Query: 281 AEGVSSEKIL 290
G+ E+IL
Sbjct: 375 EAGIPKEQIL 384
>gi|395794489|ref|ZP_10473812.1| ferredoxin--NAD(+) reductase [Pseudomonas sp. Ag1]
gi|395341364|gb|EJF73182.1| ferredoxin--NAD(+) reductase [Pseudomonas sp. Ag1]
Length = 336
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQYL++ + D G ++A+ P S + ++ V G + VL GL+KGD +
Sbjct: 128 QAGQYLKVLMED-GDSRNYSMANAPH---ESDGVQLHIRHVPGGRFSEGVLAGLEKGDTL 183
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F++D ++P +L+ TG+G++P++S+IE + L++GARN
Sbjct: 184 NVELPYGE-FSLDEEV---DHPVILL-GTGTGMAPLKSIIEDQIKRGGSRPMHLFWGARN 238
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D W G PVLS+P+ WSG TG+V A V
Sbjct: 239 SDDLYLGDLPALWSRRLPGFSFTPVLSEPEPGWSGRTGWVHRAVLEDYPDLG--AYQVYA 296
Query: 266 CGQKQMAEEVTSIVLAEG 283
CG M + + AEG
Sbjct: 297 CGNPVMTTAALNDLTAEG 314
>gi|186475363|ref|YP_001856833.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia phymatum
STM815]
gi|184191822|gb|ACC69787.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
phymatum STM815]
Length = 343
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ +AG T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMAGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFFLREESDKP-----IVLLASGTGFAPLKAIVEHAVFKNITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD + W+G TG+V A
Sbjct: 245 KDLYMMELAEQWAREIPNFKFVPVLSEPDADDAWTGRTGFVHRA 288
>gi|390933823|ref|YP_006391328.1| sulfite reductase subunit B [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569324|gb|AFK85729.1| sulfite reductase, subunit B [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 263
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
R GQ+LQ+ + +G+ +P S + + + L G+ + + LK GD + I
Sbjct: 34 RHGQFLQVSIPKIGE-------APISISDYTDEYIELTIRKVGTVTDAIHELKPGDFLFI 86
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNL 208
G GF V+ + + V+I A G+G++P++S+I + + KE ++ + G ++
Sbjct: 87 RGPYGHGFPVEDFKDKN----VVIAAGGTGLAPVKSIINRYYRNPKEIKNLNILMGFKSP 142
Query: 209 KRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQ 268
K + ++D+ K+W+ ++ + D W+G TG + F KI NP T V++ G
Sbjct: 143 KDILFEDEIKKWKEK-FDVLLTVDNGDETWTGNTGLI-TKFIPELKIENPNDTIVIVVGP 200
Query: 269 KQMAEEVTSIVLAEGVSSEKILKNF 293
M + L + E I +F
Sbjct: 201 PMMMKFTCLEFLKRNIPDENIWVSF 225
>gi|374586614|ref|ZP_09659706.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptonema illini
DSM 21528]
gi|373875475|gb|EHQ07469.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptonema illini
DSM 21528]
Length = 220
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQL--RVVDVGKPTFLAIASPPSFASASG 121
+S E L+HV + +I GQY + V D K + A +S P
Sbjct: 9 VSRQTEHLYHVQM-----AEIVPEFKHPGQYAIVVDSVTDKEKKAYYAFSSLPG-----E 58
Query: 122 AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
FL+K ++A LC + G VE+ V G GF + P +L+F+ GSG+
Sbjct: 59 PVSFLLKDDGAASA--LCHAQPGYTVELLSVEGAGFQTGDVTGP-----MLLFSMGSGLG 111
Query: 182 PIRSLIESGFSSKERS---DVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNW 238
P RSLI S SS +++ ++ L++GA + Y+D+ + W+ G++ V G +
Sbjct: 112 PFRSLIRSVLSSPDQNPDLELELWHGAFTEADLPYRDEIEAWQKQGLRFV-------GCY 164
Query: 239 SGETGYVQAAFSRAKKIF-NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
E G +Q A R ++ + V G + E + LA G+ E+ NF
Sbjct: 165 DRE-GLMQNAVQRLQQAAPDLSDATVFWVGSRDFGESLQKTTLALGLRPERFRSNF 219
>gi|433653862|ref|YP_007297570.1| sulfite reductase, subunit B [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292051|gb|AGB17873.1| sulfite reductase, subunit B [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 263
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLK 142
DI H GQ+LQ+ + +G+ +P S + + + L G+ + + LK
Sbjct: 30 DILPQH---GQFLQVSIPKIGE-------APISISDYTDEYIELTIRKVGAVTDAVHELK 79
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRL 201
GD + I G GF V+ + + V+I A G+G++P++S+I + KE ++ +
Sbjct: 80 PGDFLFIRGPYGHGFPVEDFKNKN----VVIAAGGTGLAPVKSIINRYYRYPKEIKNLNI 135
Query: 202 YYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
G ++ K + ++D+ K+WE S ++ + D W+G TG + F KI NP T
Sbjct: 136 LVGFKSPKDILFEDEIKKWEES-FDVLLTVDNGDETWTGNTGLI-TKFIPELKIENPDDT 193
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M + L + E I +F
Sbjct: 194 IVIVVGPPMMMKFTCLEFLKRSIPEENIWVSF 225
>gi|288961815|ref|YP_003452125.1| phenol hydroxylase [Azospirillum sp. B510]
gi|288914095|dbj|BAI75581.1| phenol hydroxylase [Azospirillum sp. B510]
Length = 352
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 20/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
LA + P + +++D+ D P AGQY+ + + +G ++ +PP
Sbjct: 120 LAAVGPLTHDIVAIALDL-DQP----MKFWAGQYVDITLPGIGLTRSFSMGNPPV---DG 171
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
EF++K + ++ GL GD V + G F + P +++ GS
Sbjct: 172 NRLEFIIKKYPDGAFSRQLDGGLSVGDRVSVRGPYGTCFRREGRDGP-----MILVGGGS 226
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPD- 235
G++P+ S++ +S E VR +YGAR+ + + + D F+E+ S +P LS +
Sbjct: 227 GMAPLLSILRDQATSGETRPVRFFYGARSRRDLFHLDLFEEFARSLPDFAFIPALSHAEE 286
Query: 236 -GNWSGETGYVQAAFSRAKKIFNP-QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W+GETG++ R + + V CG M + V ++ GV S ++
Sbjct: 287 GDGWTGETGFIHEVLRRHLSTMDEVEAADVFSCGPPPMIDAVLPVLQMAGVESARV 342
>gi|134281322|ref|ZP_01768031.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 305]
gi|134247628|gb|EBA47713.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia pseudomallei 305]
Length = 343
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGARRSYSMATAP----HEEGPIELHIRHMPGGKFTDHVFGPMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE K + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHAHHVKLERPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + D ++W E K VPVLS+P+ + W+G TG+V A + + + G V
Sbjct: 245 KDLYLLDAAEQWAKEIPNFKFVPVLSEPEASDAWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|310779789|ref|YP_003968121.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Ilyobacter polytropus DSM 2926]
gi|309749112|gb|ADO83773.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ilyobacter
polytropus DSM 2926]
Length = 370
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 33 HLKPQRRRLATLAAAAVR--QDTTVWTPTPL---AEISPAAESLFHVSIDISDA-PDIAS 86
+L + R T A V+ +D ++ P L + + + S+ +++ DI + DI
Sbjct: 95 YLSDEERANNTRLACQVKIKKDLSIMIPEELFNVKQFTGSVLSIKNITHDIKEVLVDIGE 154
Query: 87 SHTR--AGQYLQL------RVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAE 136
+G Y+QL ++ D + + +I+S PS E L++ V G +T
Sbjct: 155 ETIEFTSGMYIQLIVPPYGKIKDYNQRAY-SISSSPS---DKNKIEMLIRLVPGGIATTW 210
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE- 195
V LK+GD +E+ G Q + ++ A GSG++P +S++ F E
Sbjct: 211 VHNFLKEGDKIELVGPFGE------FQKQETDAAMICIAGGSGMAPFKSILYDMFEKGET 264
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSR 251
+V ++GAR LK + Y ++ +E E+ +P LS+P D W+GETG + +
Sbjct: 265 EREVWYFFGARTLKDLFYLEEMRELEAKWKNFHFIPALSEPQEDEKWTGETGLITDILDK 324
Query: 252 --AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+K + + LCG M + + G+S +KI
Sbjct: 325 YLKEKTSHIESKEGYLCGSPGMINACIEVFDSNGISEDKI 364
>gi|149926230|ref|ZP_01914492.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Limnobacter sp. MED105]
gi|149825048|gb|EDM84260.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Limnobacter sp. MED105]
Length = 339
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ +++
Sbjct: 133 NAGQYIEFMLRDGSRRSY-SLANAPY---QEGGIELHIRHMPGGLFTDHVFNTMKEREIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F D P V++ A+G+G +PI+SL+E F D LY+GAR
Sbjct: 189 RFEGPFGTFFLRDDSTKP-----VVLLASGTGFAPIKSLLEQAFFKNSSRDFVLYWGART 243
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ D +W + S K VPVLS P NW+G TG+V A
Sbjct: 244 KADLYLFDLPIQWMADHSNFKFVPVLSDASPACNWTGRTGFVHHA 288
>gi|410639111|ref|ZP_11349664.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Glaciecola lipolytica E3]
gi|410141639|dbj|GAC16869.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Glaciecola lipolytica E3]
Length = 614
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + LC L+ G+ VE F R + T+++ GSG++P+R++I+
Sbjct: 448 GIASHYLCNLQPGETVEALGPFEEFFVKQRSEK-----TMVLIGAGSGMAPLRAIIDEQI 502
Query: 192 -----SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGY 244
S ++ +YGARN + Y D F ++ PVLS+PD NW G GY
Sbjct: 503 GISLQSFASNREIYFFYGARNENDLIYADDFYFLAEQNELFHYFPVLSKPDNNWLGAAGY 562
Query: 245 VQAAFS-RAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
VQ + + +CG + + +EV S++ +GV S+ I
Sbjct: 563 VQHILQLNLDSLGDLSELEFYVCGPQGLMDEVISMLERKGVKSDDI 608
>gi|94500142|ref|ZP_01306676.1| hypothetical protein RED65_13442 [Bermanella marisrubri]
gi|94427715|gb|EAT12691.1| hypothetical protein RED65_13442 [Oceanobacter sp. RED65]
Length = 265
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 90 RAGQYLQLRVVDVGKP-----TFLAIASPPSFASASGAFEFLVKSVAGSTAEV----LCG 140
++GQYL L + DV F IAS + + + + +++ + +++V +
Sbjct: 48 KSGQYLALEL-DVNNDGQVHSLFYTIASRFNLEQPN-SLQLIIQKNSEFSSKVIDRLMEA 105
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L+ + V I+ MG+ F +Q +P VLI A GSGIS I+S+ E + + ++VR
Sbjct: 106 LQNQEPVNIALPMGKAF----LQTDLRFPHVLI-AAGSGISKIKSIAEEILTQRPDANVR 160
Query: 201 LYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+Y+ R + +F EW + P+L D W G TGY+ + + +
Sbjct: 161 IYWSNRKIDDFFMLSRFHEWSEFHQNLHFTPILESADKKWCGRTGYIYEVIK--EDLLDL 218
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
LCG QM + +EG+ E
Sbjct: 219 SDAQTYLCGSPQMVYGTMDELRSEGLKQEN 248
>gi|417925393|ref|ZP_12568816.1| oxidoreductase NAD-binding domain protein [Finegoldia magna
SY403409CC001050417]
gi|341591608|gb|EGS34742.1| oxidoreductase NAD-binding domain protein [Finegoldia magna
SY403409CC001050417]
Length = 371
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 34/288 (11%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTP----------TPLAEISPAAESLFHVSIDIS 79
P+L + V++D ++ P T L E P + + ++
Sbjct: 94 PMLTADELNDNVRLSCQVKVKKDISIQIPEELFNVKEYETTLVEKLPLTDRITKFRFEL- 152
Query: 80 DAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA--------FEFLVKSVA 131
P+ + + GQY+QL+ + K + F + S A E L+
Sbjct: 153 --PEGETIKFKPGQYVQLKAEEYPKGDGYEGSDEEVFRAYSIASSIRDEKHIELLIGYTK 210
Query: 132 G-STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G T LK+GD V I+ G + DE +++ A G+G +PIRS++
Sbjct: 211 GICTTYCHKVLKEGDKVTINGPYGDFYY------HDEDTEIILGAAGTGFAPIRSILNHM 264
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQ 246
+ R Y+GA+ + D+ K++E K +PVLS+ P+ NW GETG+
Sbjct: 265 RDHDVKRKARFYFGAKTPDDLFLLDELKQFEEDLYDFKFIPVLSRTTPEMNWEGETGHAD 324
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
A + K + + LCG +M E +T + GV+ ++I NF
Sbjct: 325 DAIKKYCKE-TGKNSSAYLCGSPRMIESLTKALNEVGVTDDRIYYDNF 371
>gi|407975581|ref|ZP_11156485.1| oxidoreductase FAD-binding subunit [Nitratireductor indicus C115]
gi|407428801|gb|EKF41481.1| oxidoreductase FAD-binding subunit [Nitratireductor indicus C115]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA--EVLCGLKKGDVV 147
+AGQY Q+R V + ++A+ P + FEF ++ V G A + L+ GD V
Sbjct: 134 KAGQYAQVRFNGVPARDY-SMANQPGRSH----FEFYIRHVPGGAASEHAVGTLRVGDKV 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G F ++ P +L A GSG++PI+S++E +S R + LY+GAR
Sbjct: 189 LVRGPLGSAFLREQHTGP-----ILAVAGGSGLAPIKSIVEMALASGLRQPIHLYFGART 243
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + F S+ + VPVLS+ G+ G+V A A+ + + G +
Sbjct: 244 ARDLYLTEHFGLLASTYGNFEFVPVLSEERGSARFRKGFVTTAI--AEDLPDLDGWKAYM 301
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G M E S++ GV +E I
Sbjct: 302 AGPPAMIETAGSLLQDRGVRNEDI 325
>gi|432337161|ref|ZP_19588612.1| ferredoxin--NAD(+) reductase [Rhodococcus wratislaviensis IFP 2016]
gi|430775911|gb|ELB91383.1| ferredoxin--NAD(+) reductase [Rhodococcus wratislaviensis IFP 2016]
Length = 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + EVL GL+KG +
Sbjct: 108 AGQYLKV-FLDDGDSRNYSMANPPH---ENDGVQLHIRRVQGGRFSDEVLGGLEKGTRLR 163
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F+++ PD V+ A+G+G +P++S+IE V LY+GAR
Sbjct: 164 IELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIIEDHLKRGGERSVHLYWGARGQ 218
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + ++W S V PVLS P +W+G TG V A + N V C
Sbjct: 219 GDIYLPELPEKWASDPGRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDYANLSDHEVYAC 276
Query: 267 GQKQM 271
G M
Sbjct: 277 GSPAM 281
>gi|419962921|ref|ZP_14478906.1| ferredoxin--NAD(+) reductase [Rhodococcus opacus M213]
gi|414571652|gb|EKT82360.1| ferredoxin--NAD(+) reductase [Rhodococcus opacus M213]
Length = 315
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + EVL GL+KG +
Sbjct: 108 AGQYLKV-FLDDGDSRNYSMANPPH---ENDGVQLHIRRVQGGRFSDEVLGGLEKGTRLR 163
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F+++ PD V+ A+G+G +P++S+IE V LY+GAR
Sbjct: 164 IELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIIEDHLKRGGERSVHLYWGARGQ 218
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + ++W S V PVLS P +W+G TG V A + N V C
Sbjct: 219 GDIYLPELPEKWASDPGRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDYANLSDHEVYAC 276
Query: 267 GQKQM 271
G M
Sbjct: 277 GSPAM 281
>gi|319789466|ref|YP_004151099.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein [Thermovibrio
ammonificans HB-1]
gi|317113968|gb|ADU96458.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein [Thermovibrio
ammonificans HB-1]
Length = 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 85 ASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKG 144
A H GQ++ L V G+ +SP + G E V+ V G EVL +K G
Sbjct: 49 AKWHHLPGQFVMLTVPKAGEIPISICSSP----TRRGTVELTVRKV-GRKTEVLHRMKPG 103
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYY 203
D+ I G GF V+ + E +LI A G GI+P+RSLI + R ++ + Y
Sbjct: 104 DLAAIRGPYGNGFPVEIM----EGHNLLIIAGGLGIAPLRSLIWFALDRRHRFKEIYILY 159
Query: 204 GARNLKRMAYQDKFKEW-ESSGVKIVPVLSQ----PDGNWSGETGYVQAAFSRAKKIFNP 258
G RN + + Y+++ K E S VK + VL + D W+ G + A + + +P
Sbjct: 160 GTRNYQMVLYKEELKRLRERSDVKCLFVLDRCETAEDREWADVEGVLTALIPQVE--LDP 217
Query: 259 QGTGVVLCG 267
T V +CG
Sbjct: 218 ADTYVAVCG 226
>gi|225873557|ref|YP_002755016.1| oxidoreductase family protein [Acidobacterium capsulatum ATCC
51196]
gi|225792873|gb|ACO32963.1| oxidoreductase family protein [Acidobacterium capsulatum ATCC
51196]
Length = 256
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 24/191 (12%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDV-GKPTFLA--IASPPSFASASGAFEFLVK 128
FH+ I P++ S + GQ++ D GK A +AS P AS F+ V
Sbjct: 23 FHLEFSI---PELESFDFQPGQFVSFVATDERGKHQMRAYSLASAPRGAS----FDVCVN 75
Query: 129 SVAGST-AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
VAG + +LC LK G VE G V R D ++LI ATG+GI+P+R +
Sbjct: 76 RVAGGFFSNLLCDLKPGQEVEFHGP--HGMFVLRAPLTD---SILI-ATGTGIAPVRGFV 129
Query: 188 E-----SGFSSKERSDVRLYYGARNLKRMAYQDKFKE--WESSGVKIVPVLSQPDGNWSG 240
E G S E ++ L YG R+ + Y+D F+ + + V LS+PD +W+G
Sbjct: 130 EWLFPEEGESRSEGREIWLVYGTRHASEVYYEDHFERVAAKHANFHYVKTLSRPDESWTG 189
Query: 241 ETGYVQAAFSR 251
GYVQ +R
Sbjct: 190 HRGYVQDHVAR 200
>gi|111024962|ref|YP_707382.1| ferredoxin--NAD(+) reductase [Rhodococcus jostii RHA1]
gi|111026264|ref|YP_708547.1| ferredoxin--NAD(+) reductase [Rhodococcus jostii RHA1]
gi|110823941|gb|ABG99224.1| terephthalate 1,2-dioxygenase ferredoxin reductase subunit
[Rhodococcus jostii RHA1]
gi|110825107|gb|ABH00389.1| terephthalate 1,2-dioxygenase ferredoxin reductase subunit
[Rhodococcus jostii RHA1]
Length = 336
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + EVL GL+KG +
Sbjct: 129 AGQYLKV-FLDDGDSRNYSMANPPH---ENDGVQLHIRRVQGGRFSDEVLGGLEKGTRLR 184
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F+++ PD V+ A+G+G +P++S+IE V LY+GAR
Sbjct: 185 IELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIIEDHLKRGGERSVHLYWGARGQ 239
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + ++W S V PVLS P +W+G TG V A + N V C
Sbjct: 240 GDIYLPELPEKWASDPGRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDYANLSDHEVYAC 297
Query: 267 GQKQM 271
G M
Sbjct: 298 GSPAM 302
>gi|260425943|ref|ZP_05779922.1| phenol hydroxylase P5 protein [Citreicella sp. SE45]
gi|260420435|gb|EEX13686.1| phenol hydroxylase P5 protein [Citreicella sp. SE45]
Length = 360
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 91 AGQYLQLRV-VDVGKPTF--LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V + G+ ++A+PPS G F++K G + L G+K G
Sbjct: 145 AGQYVDITVKTEKGEEITRSFSMANPPSETQELG---FIIKKYPDGRFSNELDDGGIKAG 201
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V I G F + + P V++ GSG+SP+ S++ +S E V +YG
Sbjct: 202 ADVSIEGPYGMCFRREDREGP-----VILVGAGSGMSPVWSILNDHVASGEDRPVYFFYG 256
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQG 260
AR + D+ ++ G++ +PVLS D +W+GE G+V A R K G
Sbjct: 257 ARTRDDLILLDRIDALTAAHPGIEFIPVLSHADDDADWTGERGFVHEAVDRRLKALGIDG 316
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G V CG M + +T ++ +++I
Sbjct: 317 DGDVYACGPPPMIDALTPVLFMHDFDTDRIF 347
>gi|150020543|ref|YP_001305897.1| oxidoreductase FAD-binding subunit [Thermosipho melanesiensis
BI429]
gi|149793064|gb|ABR30512.1| Oxidoreductase FAD-binding domain protein [Thermosipho
melanesiensis BI429]
Length = 365
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 44/264 (16%)
Query: 49 VRQDTTVWTPTPLAEISP---AAESLFHVSIDISDAPDIASSHT--RAGQYLQLRV---V 100
V++D + P L + SL +V+ DI + S +AGQY+Q+ +
Sbjct: 113 VKKDIKIELPEELFNVKKFKVKVISLNNVTHDIKEVRLKLSEEINFKAGQYVQVVIPPYE 172
Query: 101 DVGKPTFLA--IASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRG 156
+ +PT A IAS PS E L++ V G +T V LK GD +E+ G
Sbjct: 173 KIKQPTQRAYSIASTPS---KKDEIELLIRLVPGGIATTYVHNYLKVGDELEVIGPFGEF 229
Query: 157 FAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS----DVRLYYGARNLKRMA 212
+ D + ++ A GSG++PI+S+I F ER +V ++GAR K +
Sbjct: 230 YMRDTQK------DMICVAGGSGMAPIKSII---FDMYERGILDRNVWYFFGARTEKDLF 280
Query: 213 YQDKFKEWESSGVKI--VPVLSQPDGNWSGETG--------YVQAAFSRAKKIFNPQGTG 262
Y D FKE E K +P LS+P G+W GE G Y++ + + +G
Sbjct: 281 YVDMFKELEKKWDKFHFIPALSEPHGDWKGEVGVITDVMVKYIETVIDKENE---KEGY- 336
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSS 286
LCG M +++ G++
Sbjct: 337 --LCGSPGMINACETLMRKHGINE 358
>gi|384173270|ref|YP_005554647.1| oxidoreductase [Arcobacter sp. L]
gi|345472880|dbj|BAK74330.1| oxidoreductase [Arcobacter sp. L]
Length = 352
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
+AGQY+ V +P ++A+ PS E + + +T + +K GD
Sbjct: 133 QAGQYINYHVPGFDEPRAFSLANQPS---TGKIIELNIGIIPDGEATPWIHQNVKVGDRR 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+I+ GR F Q P ++ FA GSG+S +S+I + + L++GARN
Sbjct: 190 KITGPFGRFFVKRSAQKP-----MIFFAGGSGLSSPKSMILDELENGCILPITLFHGARN 244
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQ--GTG 262
+ + Y D F++ E K VPVLS + + WSGE G+ AKK+++ Q G
Sbjct: 245 EEELYYADMFRDLEEKYPNFKYVPVLSNNENSLWSGEVGFTNDV---AKKLYDNQFAGNK 301
Query: 263 VVLCGQKQMAEEVTSIVL 280
LCG M+E + ++
Sbjct: 302 AYLCGPPMMSEACITALM 319
>gi|297587179|ref|ZP_06945824.1| possible phenol 2-monooxygenase [Finegoldia magna ATCC 53516]
gi|297575160|gb|EFH93879.1| possible phenol 2-monooxygenase [Finegoldia magna ATCC 53516]
Length = 371
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 34/269 (12%)
Query: 49 VRQDTTVWTP----------TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLR 98
V++D ++ P T L E P + + ++ P+ + + GQY+QL+
Sbjct: 113 VKKDISIQIPEELFNVKEYETTLVEKLPLTDRITKFRFEL---PEGETIKFKPGQYVQLK 169
Query: 99 VVDVGKPTFLAIASPPSFASASGA--------FEFLVKSVAG-STAEVLCGLKKGDVVEI 149
+ K + F + S A E L+ G T LK+GD V I
Sbjct: 170 AEEYPKGDGYEGSDEEVFRAYSIASSIRDEKHIELLIGYTKGICTTYCHKVLKEGDKVTI 229
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+ G + DE +++ A G+G +PIRS++ + R Y+GA+
Sbjct: 230 NGPYGDFYY------HDEDTEIILGAAGTGFAPIRSILNHMRDHDVKRKARFYFGAKTPD 283
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D+ K++E K +PVLS+ P+ NW GETG+ A + K + + L
Sbjct: 284 DLFLLDELKQFEEDLYDFKFIPVLSRTTPEMNWEGETGHADDAIKKYCKE-TGKNSSAYL 342
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
CG +M E +T + GV+ ++I NF
Sbjct: 343 CGSPRMIESLTKALNEVGVTDDRIYYDNF 371
>gi|421476194|ref|ZP_15924102.1| oxidoreductase, FAD-dependent [Burkholderia multivorans CF2]
gi|400228828|gb|EJO58723.1| oxidoreductase, FAD-dependent [Burkholderia multivorans CF2]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 112/271 (41%), Gaps = 28/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVW----TPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A Q TV P AEI P + V+ P I
Sbjct: 61 PFALMDFEREEGKALACCATLQADTVIEADVDEDPDAEIIPVRDFAADVTRIEQLTPTIK 120
Query: 86 SS--------HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
S H +AGQY+QL + +G+ +IA+ P+ +A+G E V+ V G T
Sbjct: 121 SIRLKLSQPIHFQAGQYVQLEIPGLGQSRAFSIANAPADVAATGEIELNVRQVPGGLGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L GD V +S GR F P ++ A GSG+S RS+I +S
Sbjct: 181 YLHERLATGDRVRLSGPYGRFFVRRSAALP-----MIFMAGGSGLSSPRSMIADLLASGV 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
+ + L YG RN K + Y D+F+ VP LS+ D G+V
Sbjct: 236 TAPITLIYGQRNAKELYYHDEFRALAERYPNFTYVPALSEGAADAGDGIAQGFVHDV--- 292
Query: 252 AKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
AK FN +G LCG M + + ++
Sbjct: 293 AKAHFNGDFSGHQAYLCGPPAMIDACITALM 323
>gi|413960510|ref|ZP_11399740.1| oxidoreductase FAD-binding subunit [Burkholderia sp. SJ98]
gi|413932287|gb|EKS71572.1| oxidoreductase FAD-binding subunit [Burkholderia sp. SJ98]
Length = 348
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + G ++A+PP F++K ++ + GLK GD +
Sbjct: 141 AGQYVDLTLPSAGITRSFSMANPPD---GERRLSFIIKKYPNGAFSSRLDEGLKPGDRMI 197
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + QP P VL+ GSG+SP+ S+++ +S E VR +YGAR
Sbjct: 198 AKGPYGTCFRRED-QPG---PMVLV-GGGSGMSPLWSILQDHVASGEERPVRFFYGARTR 252
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGT-GV 263
+ + Y D+F ++ + +P LS + W+GETG++ SR + G
Sbjct: 253 RDLFYLDEFADFADKLPDFRFIPALSNAEAADEWTGETGFIHEVVSRTLRDEALAGDIDA 312
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GV E++
Sbjct: 313 YTCGPTAMIDAVIPVLQMAGVEPERL 338
>gi|358455388|ref|ZP_09165615.1| oxidoreductase FAD/NAD(P)-binding domain protein [Frankia sp. CN3]
gi|357081099|gb|EHI90531.1| oxidoreductase FAD/NAD(P)-binding domain protein [Frankia sp. CN3]
Length = 316
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 111 ASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEY-- 168
A P + +A G G E +C + GDV+ + GRG+ +D PD
Sbjct: 94 APPRTEPAADGRTLVHTVRAVGPVTEAICASRPGDVLGVRGPFGRGWPLD----PDRLAG 149
Query: 169 PTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWESSG-VK 226
+++ A G G++P+R +E S + E DV L G R + Y D+ W G ++
Sbjct: 150 ADLVLVAGGLGLAPLRPAVEYVLSRRQEYGDVALLVGGRTPLDLLYHDELAAWARGGDIQ 209
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSS 286
++ + D W+G+ G V A R + F+P T CG + M ++ GV +
Sbjct: 210 VLVTVDAADAGWTGDVGVVTALLPRTR--FDPARTVAFTCGPEIMMRLTAQALVERGVRA 267
Query: 287 EKI 289
+
Sbjct: 268 SAV 270
>gi|329894718|ref|ZP_08270521.1| Ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:OxidoreductaseFAD-binding region
[gamma proteobacterium IMCC3088]
gi|328922813|gb|EGG30144.1| Ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:OxidoreductaseFAD-binding region
[gamma proteobacterium IMCC3088]
Length = 353
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 86 SSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
S +AGQY+ + + V +IA+PPS LV A +T+ + LK GD
Sbjct: 129 SMQFQAGQYVNIALPKVDGSRAFSIANPPSVDDEVTLHVRLVPGGA-ATSYIHNELKVGD 187
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
V++S G+ F ++ D+ T+ I A GSG+S S+I + L+ GA
Sbjct: 188 SVDLSGPYGQFF----VRTSDDKDTLFI-AGGSGLSSPESMILDMLEHGSTKQIYLFQGA 242
Query: 206 RNLKRMAYQDKFK--EWESSGVKIVPVLSQP--DGNWSGETGYV-QAAFSRAKKIFNPQG 260
RN+ + +++KF+ E E VP L++P D NW G TG+V +AA S + F G
Sbjct: 243 RNVAELYHREKFEALEKEHDNFHYVPALNEPAADDNWQGFTGFVHEAAESHFEGKF--AG 300
Query: 261 TGVVLCG 267
LCG
Sbjct: 301 HKAYLCG 307
>gi|296136845|ref|YP_003644087.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thiomonas intermedia K12]
gi|295796967|gb|ADG31757.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thiomonas
intermedia K12]
Length = 343
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+Q + D + ++ ++AS PS S E ++ + G T V +K+ ++
Sbjct: 133 RAGQYIQFLLRDGARRSY-SMASAPS---ESPQVELHLRHMPGGKFTDHVFTAMKEKEIQ 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G F D P+ P + + A+G+G +PI++++E ++ + +V LY+G R
Sbjct: 189 RIEGPFGSFFLRD---DPENKPLIFL-ASGTGFAPIKAILEQMRANADPREVTLYWGGRK 244
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D + ++ ++ +PVLS D +WSG TG+V A + + G V
Sbjct: 245 QQDLYLHDWAVQQCAAMPHLRFIPVLSDADADWSGRTGFVHRAV--MDDVPDLSGYAVYA 302
Query: 266 CGQKQMAE 273
CG M E
Sbjct: 303 CGAPVMVE 310
>gi|384101990|ref|ZP_10003016.1| ferredoxin--NAD(+) reductase [Rhodococcus imtechensis RKJ300]
gi|383840515|gb|EID79823.1| ferredoxin--NAD(+) reductase [Rhodococcus imtechensis RKJ300]
Length = 336
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + EVL GL+KG +
Sbjct: 129 AGQYLKV-FLDDGDSRSYSMANPPH---ENDGVQLHIRRVQGGRFSDEVLGGLEKGTRLR 184
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G F+++ PD V+ A+G+G +P++S+IE V LY+GAR
Sbjct: 185 VELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIIEDHLKRGGERSVHLYWGARGQ 239
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + ++W S V PVLS P +W+G TG V A + N V C
Sbjct: 240 GDIYLPELPEKWASDPGRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDYANLSDHEVYAC 297
Query: 267 GQKQM 271
G M
Sbjct: 298 GSPAM 302
>gi|358011548|ref|ZP_09143358.1| Phenol hydroxylase, Ferredoxin subunit [Acinetobacter sp. P8-3-8]
Length = 353
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L++ D+ +IA+PPS G E V+ V G +T+ + LK GD +
Sbjct: 133 QAGQYINLQLPDIEGIRAFSIANPPS---EIGIVELHVRKVEGGAATSYIHNELKVGDEM 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F ++ DE V+ A GSG+S +S+I E + L+ GAR+
Sbjct: 190 ALSGPYGQFF----VRKSDE-QNVIFIAGGSGLSSPQSMIIDLLEQGETRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + ++KF++ E + +P L+ +P+ W+G TGYV A + F + +G
Sbjct: 245 VAELYNREKFEDLTKEYPNFRYIPALNAPKPEDQWTGFTGYVHEAVA---NYFENKCSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPPMIDAAISTLM 320
>gi|338730916|ref|YP_004660308.1| Oxidoreductase FAD-binding domain-containing protein [Thermotoga
thermarum DSM 5069]
gi|335365267|gb|AEH51212.1| Oxidoreductase FAD-binding domain protein [Thermotoga thermarum DSM
5069]
Length = 370
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 28 RIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL---AEISPAAESLFHVSIDISDAP-- 82
IP + + R + VR++ + P L + E + +V+ DI +
Sbjct: 91 EIPYMTKEEIARNIRLSCQVKVRKNLEIEIPEELLFVKKFKAIVEKIINVTYDIKELTLK 150
Query: 83 --DIASSHTRAGQYLQLRVVDVGK-----PTFLAIASPPSFASASGAFEFLVKSVAG--S 133
+ +AGQY+QL++ G +I+SPPS + + L++ V G +
Sbjct: 151 LIEPTEIEFKAGQYIQLKIPPYGNIKESVERAYSISSPPSLKNK---IQLLIRLVPGGVA 207
Query: 134 TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ES 189
T V +K+G+ VE G + D ++ A GSG++PIRS++ E
Sbjct: 208 TTYVHNYMKEGETVEFIGPFGEFYV------RDTKAMMICVAGGSGMAPIRSILLDMYEK 261
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQ--PDGNWSGETGYV 245
G + +E + ++GAR+L+ + Y + F+E E +P LS P+ W GE G +
Sbjct: 262 GINDRE---IWYFFGARSLRDLFYVEFFRELEQKWKVFHFIPALSNPLPEDKWEGEVGLI 318
Query: 246 QAAFSR-----AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ +K +G LCG M ++ G+ +KI
Sbjct: 319 TQVLDKYLKTVIRKDVEKEGY---LCGSPGMINASIEVMTKNGIPVDKI 364
>gi|386818282|ref|ZP_10105500.1| phenol 2-monooxygenase P5 subunit [Thiothrix nivea DSM 5205]
gi|386422858|gb|EIJ36693.1| phenol 2-monooxygenase P5 subunit [Thiothrix nivea DSM 5205]
Length = 353
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 90 RAGQYLQLRVVDV-GKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVE 148
+AG Y+ L + + +P +IASPPS LV+ G+T + LK GD +
Sbjct: 134 QAGHYINLLIPGLEDQPRAFSIASPPSEKHLIELNVALVEGGKGTTW-LHNELKVGDEIR 192
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
S GR + + P ++ A GSG+S +S+I F E + YGARN
Sbjct: 193 FSGPYGRFYVRESAPEP-----MIFLAGGSGLSSPKSMILDLFERGETRPITFIYGARNQ 247
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQ--GTG 262
+ Y++ F+E E S +PVLS D W G GYV A AK F+ + G
Sbjct: 248 AELYYRELFEELAAEHSNFTYLPVLSNEPEDSGWQGLRGYVHEA---AKAHFDGKFAGNK 304
Query: 263 VVLCGQKQMAEE-VTSIVLAEGVSSEKILKNF 293
+CG M + +T+++ E ++NF
Sbjct: 305 AYMCGPPPMIDACITTLMQGRLFEKEMFMENF 336
>gi|374998633|ref|YP_004974132.1| propane monooxygenase (reductase subunit) [Azospirillum lipoferum
4B]
gi|357426058|emb|CBS88957.1| propane monooxygenase (reductase subunit) [Azospirillum lipoferum
4B]
Length = 352
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 20/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
LA + P + +++D+ D P AGQY + + +G ++ +PP+
Sbjct: 120 LAAVEPLTHDIVAIALDL-DQP----MKFWAGQYADITLPGIGLTRSFSMGNPPA---DG 171
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
EF++K + ++ GL GD V + G F + P +++ GS
Sbjct: 172 NRLEFIIKKYPDGAFSRQLDGGLSVGDRVSVRGPYGSCFRREGRDGP-----MILVGGGS 226
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPD- 235
G++P+ S++ +S E VR +YGAR+ + + + D F+E+ S +P LS +
Sbjct: 227 GMAPLLSILRDQAASGETRPVRFFYGARSRRDLFHLDLFEEFARSLPDFAFIPALSHAEE 286
Query: 236 -GNWSGETGYVQAAFSRA-KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W+GETG++ R ++ + V CG M + V ++ GV S ++
Sbjct: 287 GDGWTGETGFIHEVLRRHLSEMAEVEEADVFSCGPPPMIDAVLPVLQMAGVDSARV 342
>gi|148255038|ref|YP_001239623.1| phenol hydroxylase [Bradyrhizobium sp. BTAi1]
gi|146407211|gb|ABQ35717.1| putative phenol hydroxylase (Phenol 2-monooxygenase P5 component)
[Bradyrhizobium sp. BTAi1]
Length = 356
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + D ++A+ P + F++K +A++ GL GDVV
Sbjct: 149 AGQYVDLTIDDGRITRAFSMANAPGEGTR---LSFIIKKYPNGAFSAQLDGGLGVGDVVM 205
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + P +L+ GSG+SP+ S++ +S E+ VR +YGAR
Sbjct: 206 AKGPYGTCFRREERPGP-----MLLIGGGSGMSPLWSILADHIASGEQRPVRFFYGARTR 260
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGT-GV 263
+ Y D+ + + K VP LS P+ W GETG+V +R K N G
Sbjct: 261 ADLFYLDELAAIGRQLNDFKFVPALSHASPEDGWDGETGFVHEVVARHLKQENLAGAIDA 320
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GV + I
Sbjct: 321 YACGPTPMIDAVLPVLQINGVEPDHI 346
>gi|401669352|gb|AFP97331.1| phenol hydroxylase component 5 [Arhodomonas sp. Seminole]
Length = 353
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 27/232 (11%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
T + ++SP A+ +F I++ D +AG+Y+ L + D+ P ++A+PPS
Sbjct: 108 TVVDIVDLSPTAKGVF---IELDRELDF-----QAGKYVNLHLPDIDMPRAFSLANPPS- 158
Query: 117 ASASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
E V+ V G +T + L GD + +S GR F R +++ + F
Sbjct: 159 --EKRVIELNVRLVPGGEATTYIHEQLAVGDKLHVSGPYGRFFV--RKSASEDF---IFF 211
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS 232
A G+G+S +S+I + + L+YG R+ + Y + F+E + + VP LS
Sbjct: 212 AGGTGLSSPKSMILDLLHEGDGRHITLFYGQRHRAELYYHEFFEELAAKHANFTYVPALS 271
Query: 233 QP--DGNWSGETGYVQAAFSRAKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
+P D +W G TG+V A++ F + +G LCG M + + ++
Sbjct: 272 EPKTDDDWDGATGFVTDV---AQEHFGGKFSGHKAYLCGPPPMIDACLTTLM 320
>gi|169824795|ref|YP_001692406.1| sodium-translocating NADH-quinone reductase subunit F [Finegoldia
magna ATCC 29328]
gi|302379648|ref|ZP_07268133.1| putative NADH:ubiquinone oxidoreductase, Na(+)-translocating, F
subunit [Finegoldia magna ACS-171-V-Col3]
gi|303234503|ref|ZP_07321140.1| putative NADH:ubiquinone oxidoreductase, Na(+)-translocating, F
subunit [Finegoldia magna BVS033A4]
gi|167831600|dbj|BAG08516.1| sodium-translocating NADH-quinone reductase subunit F [Finegoldia
magna ATCC 29328]
gi|302312555|gb|EFK94551.1| putative NADH:ubiquinone oxidoreductase, Na(+)-translocating, F
subunit [Finegoldia magna ACS-171-V-Col3]
gi|302494337|gb|EFL54106.1| putative NADH:ubiquinone oxidoreductase, Na(+)-translocating, F
subunit [Finegoldia magna BVS033A4]
Length = 371
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 34/288 (11%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTP----------TPLAEISPAAESLFHVSIDIS 79
P+L + V++D ++ P T L E P + + ++
Sbjct: 94 PMLTADELNDNVRLSCQVKVKKDISIQIPEELFNVKEYETTLVEKLPLTDRITKFRFEL- 152
Query: 80 DAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA--------FEFLVKSVA 131
P+ + + GQY+QL+ + K + F + S A E L+
Sbjct: 153 --PEGETIKFKPGQYVQLKAEEYPKGDGYEGSDEEVFRAYSIASSIRDEKHIELLIGYTK 210
Query: 132 G-STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G T LK+GD V I+ G + DE +++ A G+G +PIRS++
Sbjct: 211 GICTTYCHKVLKEGDKVTINGPYGDFYY------HDEDTEIILGAAGTGFAPIRSILNHM 264
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQ 246
+ R Y+GA+ + D+ K++E K +PVLS+ P+ NW G+TG+
Sbjct: 265 RDHDVKRKARFYFGAKTPDDLFLLDELKQFEEDLYDFKFIPVLSRTTPEMNWEGDTGHAD 324
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
A + K + + LCG +M E +T + GV+ ++I NF
Sbjct: 325 DAIKKYCKE-TGKNSSAYLCGSPRMIESLTKALNEVGVTDDRIYYDNF 371
>gi|358638841|dbj|BAL26138.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Azoarcus sp. KH32C]
Length = 417
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + D G+ +IA+PP A E ++ V G T +V +K+ D++
Sbjct: 209 RAGQYIDFLLAD-GRRRSFSIANPPEDAET---MELHIRLVPGGGFTEQVFTTMKERDIL 264
Query: 148 EISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+G G D +P +++ A G+G +PI+S++E ++ + LY+G+R
Sbjct: 265 RFEGPIGSFGLREDSTRP------IVMIAGGTGFAPIKSIVEHAIHARVTRPITLYWGSR 318
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAA 248
N + + + WES+ G + VPVLS + +W G G V A
Sbjct: 319 NRAGLYMDELARSWESALPGFRYVPVLSDATTEDDWRGRRGLVHHA 364
>gi|71908850|ref|YP_286437.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase
FAD-binding region [Dechloromonas aromatica RCB]
gi|71848471|gb|AAZ47967.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Dechloromonas aromatica RCB]
Length = 333
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY + + D K ++ +P + G E+ V+ + G + LK G ++
Sbjct: 132 QAGQYASVLMKDGAKRSYSMANAP----NEDGVVEWHVRRMEGGRFSTHAYDKLKAGGML 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G +QP D V++ A+G+G +PI SL+++ R LY+G R
Sbjct: 188 RIEGPFGTFL----LQPGDA--PVVLLASGTGYAPIASLLKTHGPELARRKAVLYWGGRT 241
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D + WE+ G+++VPVLS+ W+G TG+V AA + + G V
Sbjct: 242 WADLYAVDSIESWEAEYPGIRLVPVLSEAGPEWAGRTGFVHAAV--LSDLPDLSGHEVYA 299
Query: 266 CGQKQMAEEVTSIVLAE-GVSSEKILKN 292
CG M + + AE G+ E+ +
Sbjct: 300 CGNPLMIDAARASFTAEAGLPPERFFAD 327
>gi|221210606|ref|ZP_03583586.1| phenol hydroxylase P5 protein (Phenol 2-monooxygenaseP5 component)
[Burkholderia multivorans CGD1]
gi|221169562|gb|EEE02029.1| phenol hydroxylase P5 protein (Phenol 2-monooxygenaseP5 component)
[Burkholderia multivorans CGD1]
Length = 354
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 112/271 (41%), Gaps = 28/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVW----TPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A Q TV P AEI P + V+ P I
Sbjct: 61 PFALMDFEREEGKALACCATLQADTVIEADVDEDPDAEIIPVRDFAADVTRIEQLTPTIK 120
Query: 86 SS--------HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STA 135
S H +AGQY+QL + +G+ +IA+ P+ +A+G E V+ V G T
Sbjct: 121 SIRLKLSQPIHFQAGQYVQLEIPGLGQSRAFSIANAPADVAATGEIELNVRQVPGGLGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L GD V +S GR F P ++ A GSG++ RS+I +S
Sbjct: 181 YLHERLATGDRVRLSGPYGRFFVRRSAALP-----MIFMAGGSGLASPRSMIADLLASGV 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
+ + L YG RN K + Y D+F+ VP LS+ D G+V
Sbjct: 236 TAPITLIYGQRNAKELYYHDEFRALAERYPNFTYVPALSEGAADAGDGIAQGFVHDV--- 292
Query: 252 AKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
AK FN +G LCG M + + ++
Sbjct: 293 AKAHFNGDFSGHQAYLCGPPAMIDACITALM 323
>gi|119898141|ref|YP_933354.1| phenol 2-monooxygenase [Azoarcus sp. BH72]
gi|119670554|emb|CAL94467.1| Phenol 2-monooxygenase [Azoarcus sp. BH72]
Length = 353
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 29/204 (14%)
Query: 90 RAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDV 146
+AGQY+ L + D +G F +IAS P SA+G E ++ VAG TA V LK GD
Sbjct: 135 QAGQYINLHLPDGIGTRAF-SIASAP---SAAGEIELNIRIVAGGQGTAYVHEKLKAGDA 190
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ESGFSSKERSDVRLY 202
+ I+ GR F + P V+ A GSG+S RS+I E GF + L
Sbjct: 191 IRITGPYGRFFVKKSAKVP-----VVFMAGGSGLSSPRSMILDLLEEGFDLP----ITLV 241
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS-QPDG-NWSGETGYVQAAFSRAKKIFNP 258
YG R+ + Y D+F + VP LS +P+G +W+G G+V A AK F+
Sbjct: 242 YGQRSRAELYYHDEFLALAQRHPNFRYVPALSHEPEGSDWNGFRGFVHEA---AKAAFDN 298
Query: 259 --QGTGVVLCGQKQMAEEVTSIVL 280
+G LCG M + + ++
Sbjct: 299 DFRGHKAYLCGPPLMIDACITTLM 322
>gi|422321152|ref|ZP_16402202.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Achromobacter
xylosoxidans C54]
gi|317404010|gb|EFV84469.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Achromobacter
xylosoxidans C54]
Length = 338
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + + D +F ++AS P A +F V+ + G T + L + G +EI
Sbjct: 132 GQYMNVVLPDGATRSF-SMASAP----AGNLVDFHVRRIPGGRYTDQWLGQARPGAALEI 186
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G V D P +++ ATG+GI+PI++++ES + + V LY+G R
Sbjct: 187 EAPLG----VFSYHEEDWRPMIMM-ATGTGIAPIKAILESLLDNDDCPPVTLYWGMRTEA 241
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ +++ + W VPVLS+ +W G G+VQ A + LCG
Sbjct: 242 DLYLREQIEGWAGRLYEFNFVPVLSRAGADWRGRRGHVQQAVLADHGDLSEH--AFYLCG 299
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M E T+++ G S + + +
Sbjct: 300 APAMVSEATTLLAGRGASLDHMYAD 324
>gi|399993693|ref|YP_006573933.1| NADH oxidoreductase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658248|gb|AFO92214.1| putative NADH oxidoreductase [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 387
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 90 RAGQYLQLRVVDVGKPTF--LAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGD 145
+AGQY+ L V G T AI+SPP + ++ V+ V G + ++ GL +G
Sbjct: 80 QAGQYVNLFVTVDGTHTARPFAISSPPQIRTH---YDITVREVPGGFVSPYLVRGLTEGQ 136
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+++ S MG + D ++ A GSG++P S+I SS L YG+
Sbjct: 137 LLQSSGPMGTFYHNPLFHGDD----LVFLAGGSGVAPAMSMIHDFLSSARPPRFHLIYGS 192
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
RN + ++++ + + I V+S+PD ++SG +G++ A AK + +G
Sbjct: 193 RNTGDVIFREQLHQLADRHESLTIDEVISEPDADYSGHSGFLNADLI-AKLVGPLEGKTF 251
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M + + GVS K+
Sbjct: 252 YLCGPNAMCDFCQPELTKLGVSERKV 277
>gi|78043750|ref|YP_359781.1| hydrogenase subunit gamma [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995865|gb|ABB14764.1| hydrogenase, gamma subunit [Carboxydothermus hydrogenoformans
Z-2901]
Length = 280
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
+ GQ Q+ + VG+ T +SP + +G EF +K V G V+ ++ G V I
Sbjct: 43 KPGQVAQISIFGVGEATISITSSP----TRTGMLEFSIKKV-GRLTSVIHQMEPGMKVGI 97
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD---VRLYYGAR 206
G F + ++ D +L G G++P+RSLI+ + + R D V + YGAR
Sbjct: 98 RGPYGNHFPYEMMKGKD----LLFIGGGIGLAPLRSLIDFVLAPENRKDYGKVEILYGAR 153
Query: 207 NLKRMAYQ-DKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + ++ D F W + K+ + +P+ W G G+V A NPQ +
Sbjct: 154 SSADLCFKYDLFDNWPKQPDTKVYVTIDRPEEGWDGHVGFVPAYLEELNP--NPQNKVTI 211
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
CG M + V + G S ++++
Sbjct: 212 TCGPPIMIKFVLQALEKMGYSEDQVV 237
>gi|325294938|ref|YP_004281452.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065386|gb|ADY73393.1| oxidoreductase FAD/NAD(P)-binding domain protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 292
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 78 ISDAPDIASSHTR-----------------AGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
I+D D+A H + GQ++ L V G+ +SP +
Sbjct: 25 ITDVEDLAPDHKKFSFVFLDEKVNEEWNHIPGQFVMLTVPKGGEIPISICSSP----TRR 80
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
G E V+ V G EVL ++ GD+V I G GF V+ + E VLI A G GI
Sbjct: 81 GTVELTVRKV-GRKTEVLHKMQPGDLVAIRGPYGNGFPVEIM----EGHNVLIIAGGLGI 135
Query: 181 SPIRSLIESGFSSKE-RSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVL----SQP 234
+P+RSLI + DV + YG RN + + Y+D+ + E +K + +L ++
Sbjct: 136 APLRSLIWYILDKRHLYKDVYILYGTRNYESVLYKDELRRLKERKDIKCLYILDKFENEE 195
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
D W+ G + A +P+ T V +CG
Sbjct: 196 DRKWADREGLLTALIPEVS--LDPKETYVAVCG 226
>gi|563906|emb|CAA53035.1| hydrogenase (gamma subunit) [Pyrococcus furiosus DSM 3638]
Length = 291
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P++A T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 39 EDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSP----MRKGFFELCIRK-AGRVTTVV 93
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 94 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 149
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D NW G G Q A
Sbjct: 150 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPNWPGLKGRPQQFIVEAN 208
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
NP+ T V +CG +M + V ++ G E I
Sbjct: 209 T--NPKNTAVAICGPPRMYKSVFEALINYGYRPENIF 243
>gi|18977264|ref|NP_578621.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus furiosus DSM
3638]
gi|397651394|ref|YP_006491975.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus furiosus COM1]
gi|74536497|sp|Q8U2E4.1|HYD1G_PYRFU RecName: Full=Sulfhydrogenase 1 subunit gamma; AltName:
Full=Sulfhydrogenase I subunit gamma; AltName:
Full=Sulfur reductase subunit HydG
gi|18892933|gb|AAL81016.1| sulfhydrogenase gamma subunit [Pyrococcus furiosus DSM 3638]
gi|393188985|gb|AFN03683.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus furiosus COM1]
Length = 292
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P++A T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSP----MRKGFFELCIRK-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D NW G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPNWPGLKGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKSVFEALINYGYRPENIF 244
>gi|421485866|ref|ZP_15933420.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter piechaudii HLE]
gi|400195966|gb|EJO28948.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 3
[Achromobacter piechaudii HLE]
Length = 336
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 22/240 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAP-DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
P + I E + H+++ + DA D GQY+ + + D G+ ++AS
Sbjct: 102 PATVQRIEAVTEDIVHLTLALPDAGLDFVP-----GQYMNVLLPD-GETRSFSMAS---- 151
Query: 117 ASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
ASA +F V+ + G T L + G + I +G V D P +++
Sbjct: 152 ASAGQQVDFHVRRIPGGRYTDHWLGQAQAGAALTIEAPLG----VFSYHEEDWRPLIMM- 206
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS 232
ATG+GI+PI++++ES ++ V LY+G R + + +D+ W VPVLS
Sbjct: 207 ATGTGIAPIKAILESLLDKEDCPPVSLYWGMRTEEDLYLKDEIAGWAGRLYEFNFVPVLS 266
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ +W G G+VQ A + + LCG M ++ ++ G S + + +
Sbjct: 267 RASASWQGRRGHVQDAVLEDHDDLSEH--AIYLCGAPAMIQQAKHLLAGRGASLDHMYAD 324
>gi|390574361|ref|ZP_10254491.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia terrae
BS001]
gi|420255923|ref|ZP_14758793.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
gi|389933674|gb|EIM95672.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia terrae
BS001]
gi|398044178|gb|EJL37018.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
Length = 343
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++AS P A G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMASAPH---ADGPVELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFFLREESDKP-----IVLLASGTGFAPLKAIVEHAVFKNITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + +W E K VPVLS+PD + W+G G+V A
Sbjct: 245 KDLYMMELADQWAREIPNFKFVPVLSEPDADDAWTGRIGFVHRA 288
>gi|209517431|ref|ZP_03266272.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
H160]
gi|209502085|gb|EEA02100.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
H160]
Length = 343
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++AS P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMASAPH---VEGPVELHIRHMPGGAFTDHVFNSMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFF----LREDSDKPIVLL-ASGTGFAPLKAIVEHAVFKNITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD + W+G TG+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDADDAWTGRTGFVHRA 288
>gi|330818052|ref|YP_004361757.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia gladioli BSR3]
gi|327370445|gb|AEA61801.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia gladioli BSR3]
Length = 343
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++AS P G E ++ + G T V +K+ +++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMASAPH---EEGPVELHIRHLPGGKFTDHVFNTMKEREILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ E P VL+ A+G+G +PI++++E +RLY+GAR
Sbjct: 190 FEGPLGTFF----LREDSEKPIVLL-ASGTGFAPIKAIVEHARHRGFTRPMRLYWGARRK 244
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++WE + VPVLS+PD + W+G TG+V A
Sbjct: 245 KDLYLFELAEQWEREIPNFRFVPVLSEPDADDAWTGRTGFVHRA 288
>gi|294011189|ref|YP_003544649.1| toluene ortho-monooxygenase subunit [Sphingobium japonicum UT26S]
gi|292674519|dbj|BAI96037.1| toluene ortho-monooxygenase subunit [Sphingobium japonicum UT26S]
Length = 352
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 90 RAGQYLQLRVVDVGKPT-FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
+AGQY+ L V + G T ++AS P A A E ++ V G T + LK+GD
Sbjct: 133 QAGQYVNLTVGEEGVLTRAFSLASDPH---APDAVELNIRIVPGGVGTTWIHEHLKEGDR 189
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
V++S GR F + P +L A GSG+S RS+I + E + L YGAR
Sbjct: 190 VKLSGPYGRFFVRHSAKAP-----LLFLAGGSGLSSPRSMILDLIARNETLPITLVYGAR 244
Query: 207 NLKRMAYQDKFKEWES--SGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + + Y ++F+ + + + +P LS D W+G GYV A +RA + +G
Sbjct: 245 SREELYYHEEFEALAAAHANFRYIPALSDEPADSGWTGFRGYVHEA-ARAAFDNDFRGHK 303
Query: 263 VVLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 304 AYLCGPPVMIEACLAALM 321
>gi|254251643|ref|ZP_04944961.1| Ferredoxin [Burkholderia dolosa AUO158]
gi|124894252|gb|EAY68132.1| Ferredoxin [Burkholderia dolosa AUO158]
Length = 343
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD WSG TG+V A + + + G V
Sbjct: 245 KDLYLDELAEQWAREIPNFKYVPVLSEPDDADQWSGRTGFVHRAV--IEDLADLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|390167236|ref|ZP_10219233.1| toluene ortho-monooxygenase subunit [Sphingobium indicum B90A]
gi|389590181|gb|EIM68182.1| toluene ortho-monooxygenase subunit [Sphingobium indicum B90A]
Length = 352
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 90 RAGQYLQLRVVDVGKPT-FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
+AGQY+ L V + G T ++AS P A A E ++ V G T + LK+GD
Sbjct: 133 QAGQYVNLTVGEEGVLTRAFSLASDPH---APDAVELNIRIVPGGVGTTWIHEHLKEGDR 189
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
V++S GR F + P +L A GSG+S RS+I + E + L YGAR
Sbjct: 190 VKLSGPYGRFFVRHSAKAP-----LLFLAGGSGLSSPRSMILDLIARNETLPITLVYGAR 244
Query: 207 NLKRMAYQDKFKEWES--SGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + + Y ++F+ + + + +P LS D W+G GYV A +RA + +G
Sbjct: 245 SREELYYHEEFEALAAAHANFRYIPALSDEPADSGWTGFRGYVHEA-ARAAFDNDFRGHK 303
Query: 263 VVLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 304 AYLCGPPVMIEACLAALM 321
>gi|258514635|ref|YP_003190857.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257778340|gb|ACV62234.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 283
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVA 131
F V D D + S + GQ + V G+ T +SP + G EF +K V
Sbjct: 30 FQVVFD--DPLAVQSFAHKPGQVALISVFGEGEATISITSSP----TVKGFLEFSIKKV- 82
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G VL ++ G V + G GF +D ++ + +L G G++P+RSLI+
Sbjct: 83 GRLTSVLHEIEAGAKVAVRGPYGNGFPLDEMKGKN----LLFVGGGIGLAPLRSLIDYVL 138
Query: 192 SSKERSD---VRLYYGARNLKRMAY-QDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQ 246
+ + RSD V + YGAR++ + + +D F +W + ++ + + + WSG G+V
Sbjct: 139 AEENRSDYGNVEILYGARSMADICFKEDLFNKWTACKDTRVYTTIDREEPEWSGHVGFVP 198
Query: 247 AAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
A K + N + + CG M + + + G + E+I+
Sbjct: 199 AYLEEIKPVSNNKVA--ITCGPPVMIKFILMSLQRLGFTEERII 240
>gi|413959545|ref|ZP_11398780.1| FAD/NAD(P)-binding oxidoreductase subunit [Burkholderia sp. SJ98]
gi|224798915|gb|ACN62958.1| phenol hydroxylase subunit [Diaphorobacter sp. PCA039]
gi|413940285|gb|EKS72249.1| FAD/NAD(P)-binding oxidoreductase subunit [Burkholderia sp. SJ98]
Length = 353
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P A + P + VS P I
Sbjct: 61 PFALMDFERDDGKTLACCATLQADTTIEADIDEEPDARVIPVRDFAATVSRVEDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H + AGQY+Q+ + VG F +IA+ P+ +A+ E V+ + G T
Sbjct: 121 AIHLQLDKAIDFQAGQYVQVEIPGVGSRAF-SIANQPADVAATKGIELNVRKLPGGAGTT 179
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ LK GD + ++ GR F + + P +L A GSG+S RS+I S
Sbjct: 180 WLHEQLKAGDRLRVAGPYGRFFVRESARQP-----MLFMAGGSGLSSPRSMIADLLSRGC 234
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
+ L YG R+ + + Y +F+ + + VP LS +P+G +W G G+V A
Sbjct: 235 TLPITLVYGQRSHEELYYDAEFRALAEQHANFSYVPALSHEPEGSDWDGFRGFVHEA--- 291
Query: 252 AKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
AK F G LCG M E S ++
Sbjct: 292 AKAHFGGSFVGQKAYLCGPPPMIEACISTLM 322
>gi|167630081|ref|YP_001680580.1| nad/fad binding oxidoreductase [Heliobacterium modesticaldum Ice1]
gi|167592821|gb|ABZ84569.1| nad/fad binding oxidoreductase [Heliobacterium modesticaldum Ice1]
Length = 334
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 17/222 (7%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVA 131
F VS D A HT GQ L + VG+ F A +P + +K V
Sbjct: 84 FCVSTIGEDGQPAAPFHTGPGQLAMLSLPGVGEAMFSATDAPDH-------LQISIKKV- 135
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G E L + +G V I G GF ++ ++ + VL G G++P+RS+I
Sbjct: 136 GLLTEQLHEICEGQTVGIRGPYGNGFDMEAMKGKN----VLFIGGGIGLAPVRSVIRYCV 191
Query: 192 SSKER-SDVRLYYGARNLKRMAYQ-DKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAA 248
+E ++ L YGAR + ++ D F+ W + K+ + + D NW G G+V A
Sbjct: 192 DHREDYGNLHLIYGARTYDDLVFKYDLFETWPKVPDFKVSVTVDKGDDNWKGNVGFVPAF 251
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + +P+ T +LCG M + I+ G + E ++
Sbjct: 252 IEQLQP--SPENTVCILCGPPIMIKFTLGILDKLGFTPENVI 291
>gi|341926048|dbj|BAK53947.1| oxidoreductase FAD/NAD(P)-binding domain protein [Chitiniphilus
shinanonensis]
Length = 292
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
++GQ++ V G+ A++ PPS + F V++V G L LK GD + +
Sbjct: 59 KSGQFIMCTVFGAGE---FAVSLPPS--PENDRFHISVRAV-GKVTHALHALKPGDKLGV 112
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNL 208
G GF + I+ + ++ A G G+ P+RS I +E + L YGAR+
Sbjct: 113 RGPFGNGFPFEEIKGKN----IIYVAGGIGLIPLRSSIVHALQHREDFGRIILLYGARSS 168
Query: 209 KRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + YQ + W +++G + + +P+ W GE GYV +A + + +CG
Sbjct: 169 RDLMYQPDIQLWKQNAGFETFITIDRPEEGWDGEVGYVNQLVDKANVPID--NSVAFVCG 226
Query: 268 QKQMAEEVTSIVLAEGVSSEKIL 290
M V L G+S + I+
Sbjct: 227 PPVMFNSVIGEFLKRGMSEDAIV 249
>gi|409096460|ref|ZP_11216484.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus zilligii AN1]
Length = 295
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
PL E+ E LF + P++A T R GQ++QL + VG+ P S S
Sbjct: 30 PLTEM----EKLFLFRFE---NPELAEKWTFRPGQFVQLTIPGVGE-------VPISICS 75
Query: 119 AS---GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+S G FE ++ AG V+ L+ GDVV + G GF VD + D +L A
Sbjct: 76 SSMRKGFFELCIRK-AGRVTTVIHRLRPGDVVLVRGPYGNGFPVDAWEGMD----LLFIA 130
Query: 176 TGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPV 230
G G +P+RS+ ++ + ++ A+ K + + + + E+ VKI+
Sbjct: 131 AGLGAAPLRSVFLYAMDNRWKYGNITFINTAKYGKDLLFYKELEAMKDLAEAENVKIIQS 190
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+++ D W G G Q A NP+ T V +CG +M +EV ++ G E I
Sbjct: 191 VTR-DPQWPGLHGRPQNLIPEANT--NPKNTAVAICGPPRMYKEVFESLINYGYRPENIF 247
>gi|304315674|ref|YP_003850819.1| sulfite reductase subunit B [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777176|gb|ADL67735.1| sulfite reductase, subunit B [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 263
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLK 142
DI H GQ+LQ+ + +G+ +P S + + + L G+ + + LK
Sbjct: 30 DILPQH---GQFLQVSIPKIGE-------APISISDYTDEYIELTIRKVGTVTDAIHELK 79
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERSDVRL 201
GD + I G GF V+ + + V+I A G+G++P++S+I + KE + +
Sbjct: 80 PGDFLFIRGPYGHGFPVEDFKNKN----VVIAAGGTGLAPVKSIINRYNRNPKEIKKLSI 135
Query: 202 YYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
G ++ K + ++D+ K+W+ ++ + D W G TG + F KI NP T
Sbjct: 136 LVGFKSPKDILFEDEIKKWKEK-FDVLLTVDNGDETWKGNTGLI-TKFIPDLKIENPDDT 193
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M + L G+ E I +F
Sbjct: 194 IVIVVGPPMMMKFTCLEFLKRGIPEENIWVSF 225
>gi|255037472|ref|YP_003088093.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Dyadobacter fermentans DSM 18053]
gi|254950228|gb|ACT94928.1| oxidoreductase FAD/NAD(P)-binding domain protein [Dyadobacter
fermentans DSM 18053]
Length = 358
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 127 VKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
+K V G A +L LK+GDV+E + MG F Q D+ V+ GSGI+P+
Sbjct: 71 IKRVPGGYASNLLLDTLKEGDVLETLEPMGHFFPK---QADDQTRQVVFIGAGSGITPLF 127
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGE 241
S+++S + S++ L YG+R + ++DK E+ + +V LSQP W GE
Sbjct: 128 SILKSVLMVEPESEIFLIYGSRREDSIIFKDKIAALENKYGRRITVVHTLSQPGEGWEGE 187
Query: 242 TGYVQAAFSRAKKI------FNPQGTGVVLCGQKQMAEE 274
TG + S KI N + LCG + M EE
Sbjct: 188 TGRLNK--SHVLKIIEKLPTLNIKEAEYFLCGPEDMMEE 224
>gi|375083299|ref|ZP_09730325.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus litoralis DSM
5473]
gi|2746738|gb|AAB94934.1| NiFe hydrogenase gamma subunit [Thermococcus litoralis DSM 5473]
gi|374742030|gb|EHR78442.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus litoralis DSM
5473]
Length = 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P IA + T + GQ++QL + +G+ +SP G FE ++ AG V+
Sbjct: 44 EDPTIAENWTFKPGQFVQLTIPGIGEVPISVCSSP----MRQGFFELCIRK-AGRVTTVV 98
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 99 HKLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 154
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 155 NITFINTARYGKDLLFYKELEAMKDIAEAENVKIIQSVTR-DPDWPGLKGRPQNFIVEAN 213
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M ++V ++ G E I
Sbjct: 214 T--NPKNTAVAICGPPRMYKDVFESLINYGYRPENI 247
>gi|372270117|ref|ZP_09506165.1| Phenol hydroxylase, ferredoxin subunit [Marinobacterium stanieri
S30]
Length = 353
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 55 VWTPTPLAEISPAAESL-FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASP 113
V T T + ++SP + + F + D+ +AGQY+ LR+ V +IA+
Sbjct: 106 VGTVTDIVDLSPTIKGITFALDDDME---------FQAGQYVNLRIPGVEGTRAFSIANK 156
Query: 114 PSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLI 173
PS + A LV + AG+T + L+ GD +++S G+ F ++ DE + I
Sbjct: 157 PSDSRALELHVRLVANGAGTTW-LHESLQVGDTLDVSGPYGQFF----VRKSDEQGAIFI 211
Query: 174 FATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVL 231
A GSG+S +S+I ++ ++ L+ G RN+ + ++ F+ + + + +P L
Sbjct: 212 -AGGSGLSSPQSMILDMLEEGDKREIYLFQGVRNVAELYNRELFEALDQQHANFHYIPAL 270
Query: 232 SQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG--VVLCG 267
++P D NW+G G+V A A K F+ +G LCG
Sbjct: 271 NEPQEDENWTGFKGFVHEA---AIKYFDNHFSGHKAYLCG 307
>gi|40787273|gb|AAR90190.1| putative flavodoxin oxidoreductase [Rhodococcus sp. DK17]
Length = 336
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + E+L GL++G +
Sbjct: 129 AGQYLKV-FLDDGDSRSYSMANPPH---ENDGVQLHIRRVQGGRFSDEMLGGLERGTRLR 184
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F+++ PD V+ A+G+G +P++S+IE V LY+GAR
Sbjct: 185 IELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIIEDHLKRGGERSVHLYWGARGQ 239
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + +W S V PVLS P +W+G TG V A + N V C
Sbjct: 240 GDIYLPELPAKWASDPGRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDYANLSDHEVYAC 297
Query: 267 GQKQM 271
G M
Sbjct: 298 GSPAM 302
>gi|170693592|ref|ZP_02884750.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
graminis C4D1M]
gi|170141374|gb|EDT09544.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
graminis C4D1M]
Length = 343
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P A G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---AEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFFLREESDKP-----IVLLASGTGFAPLKAIVEHAVFKNLNRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD + W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDASDAWTGRVGFVHRA 288
>gi|14591102|ref|NP_143177.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus horikoshii OT3]
gi|3257711|dbj|BAA30394.1| 292aa long hypothetical cytochrome-c3 hydrogenase gamma chain
[Pyrococcus horikoshii OT3]
Length = 292
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P +A + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPKLAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRRGFFELCIRR-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD+V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HRLKPGDIVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGAAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D NW G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAIKDLAEAENVKIIQSVTR-DPNWPGLHGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKSVFEALINYGYRPENI 243
>gi|386826457|ref|ZP_10113564.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Beggiatoa alba
B18LD]
gi|386427341|gb|EIJ41169.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Beggiatoa alba
B18LD]
Length = 337
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + ++ +E + + + I P+ + H +AGQYL + + D K +F +IAS
Sbjct: 102 PCRVEKLQKLSEDVMQLWLKI---PEHEALHFQAGQYLDILLNDGRKRSF-SIAST---V 154
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+ E ++ V T +V LK D++ I +G F Q P +L A
Sbjct: 155 ADLPLIELHIRRVNDGCFTQQVFDSLKVKDILRIELPLGAFFLRQDTQLP-----ILFVA 209
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ 233
G+G +P++++I+ + + ++ Y+G R+ + + D +W + + VPVLS+
Sbjct: 210 GGTGFAPVKAMIQQALAENRQREMIFYWGVRHQQDLYMHDTITQWAKDYPFIHYVPVLSE 269
Query: 234 P--DGNWSGETGYVQ 246
P + W G+TG V
Sbjct: 270 PLAEDQWQGKTGLVH 284
>gi|410615988|ref|ZP_11326984.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Glaciecola polaris LMG 21857]
gi|410164470|dbj|GAC31122.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Glaciecola polaris LMG 21857]
Length = 623
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMG--RGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI-E 188
G + +C ++ G+ +E +G F V Q D T+++ GSG++P++S+I E
Sbjct: 457 GFGSNYICNMQPGESIE---AIGPFEKFHVKDSQH-DVTKTMVMIGAGSGMAPLKSIILE 512
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQ 246
K + ++ Y+GAR+ + +++ F++ E PVLS+P+ +W GETGYVQ
Sbjct: 513 QLEKLKCQQNMHFYFGARHKIDLIHRELFEKLSSEHQNFYFTPVLSKPESDWHGETGYVQ 572
Query: 247 AAFSRA-KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + N LCG ++M + ++ +GV +IL
Sbjct: 573 QIIEHSFLTLGNLNQLEFYLCGPRKMMLDTIVMLKNQGVKDSEIL 617
>gi|54025027|ref|YP_119269.1| phenol hydroxylase [Nocardia farcinica IFM 10152]
gi|54016535|dbj|BAD57905.1| putative phenol hydroxylase [Nocardia farcinica IFM 10152]
Length = 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 112/254 (44%), Gaps = 42/254 (16%)
Query: 41 LATLAAAAVRQDTTVWTPTPLAEISPAA--ESLFHVSIDISDAPDIASSHTR-------- 90
LA AA R D TV P+A++ P L S + + DIA R
Sbjct: 73 LALACQAAPRTDVTV---APVADVGPEGPRHPLRDHSGTVVELADIARHARRLVVELDEP 129
Query: 91 ----AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKK 143
AGQY +L V G ++A+PPS A EF VK V G A + GL+
Sbjct: 130 MEFSAGQYAELIVPGAGVGRQYSMANPPSEART---LEFHVKWVEGGLATDGWIFAGLRP 186
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
GD +E+ +G+ FA+ R Q E P +LI G+G++P+++++ + + LY+
Sbjct: 187 GDRIELRGPLGQ-FAMLRAQ---EEPAILI-GGGTGLAPLKAIVRHALARDLVPSLDLYH 241
Query: 204 GARNLKRMAYQDKFKEWESSGVKIV--PVLSQPDGNWSGETGYVQ----AAFSRAKKIFN 257
G R + + F+ ++ ++ PVLS+ W G TG V A F+ K
Sbjct: 242 GGRTRADLYDVEFFRALAAADTRLRYHPVLSEE--TWDGPTGLVTDVVLADFASCK---- 295
Query: 258 PQGTGVVLCGQKQM 271
G LCG M
Sbjct: 296 --GRSAYLCGPPAM 307
>gi|357030135|ref|ZP_09092099.1| putative propane monooxygenase reductase [Mesorhizobium amorphae
CCNWGS0123]
gi|355533110|gb|EHH02450.1| putative propane monooxygenase reductase [Mesorhizobium amorphae
CCNWGS0123]
Length = 353
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 13/208 (6%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKGDVV 147
AGQY+ + V T S + + F++K G + L G+K G V
Sbjct: 137 AGQYVDITVTTQKGETITRSFSMANTPDQAQKLSFIIKKYPEGKFSGELDSGGIKVGAEV 196
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F D Q P +++ GSG+SPI S++ S E+ V +YGAR
Sbjct: 197 TVVGPYGTCFRRDERQGP-----LILVGAGSGMSPIWSILNDHLKSGEKRPVYFFYGART 251
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ Y D+ E + S V +PVLS D W GE G+V + K G G
Sbjct: 252 RNDLFYLDRIAELIGQHSEVTFIPVLSHATDDAEWEGERGFVHQSVDAKLKQLAVDGQGD 311
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
V CG M + + ++ G +E+I
Sbjct: 312 VHACGPPPMIDALQPVLFMNGFETERIF 339
>gi|90416271|ref|ZP_01224203.1| Ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:OxidoreductaseFAD-binding region
[gamma proteobacterium HTCC2207]
gi|90331996|gb|EAS47210.1| Ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:OxidoreductaseFAD-binding region
[marine gamma proteobacterium HTCC2207]
Length = 353
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
+AGQY+ L++ + +IA+ PS G E ++ + +T + LK GD +
Sbjct: 133 QAGQYINLQLPGIEGTRAFSIANAPS---NPGRIELHIREIPDGAATGYIHNELKVGDEI 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E S G+ F V + P D VL A GSG+S S+I S + + L+ GARN
Sbjct: 190 EFSGPYGQ-FFVRKSDPKD----VLFIAGGSGLSSPESMILDMLESGDERQITLFQGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAA 248
+ ++++F++ S VP L++P + NW G TG+V A
Sbjct: 245 GTELYHRERFEQLTERHSNFTYVPALNEPVEEDNWQGFTGFVHEA 289
>gi|238028394|ref|YP_002912625.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia glumae
BGR1]
gi|237877588|gb|ACR29921.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia glumae
BGR1]
Length = 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++AS P G E ++ + G T V +K+ +++
Sbjct: 134 AGQYIEFILKDGTRRSY-SMASAPH---EEGPLELHIRHMPGGKFTDHVFNTMKEREILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ E P VL+ A+G+G +PI++++E +RLY+GAR
Sbjct: 190 FEGPLGTFF----LREDSEKPIVLL-ASGTGFAPIKAIVEHARHRNFTRPMRLYWGARRR 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E + VPVLS+PD + W+G TG+V A +P V
Sbjct: 245 KDIYLFELAEQWAREIPNFEFVPVLSEPDADDAWTGRTGFVHRAVVEDLPDLSP--FQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|407327679|dbj|BAM45388.1| phenol hydroxylase [uncultured bacterium]
Length = 353
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWTPT---PLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P A + P + VS P I
Sbjct: 61 PFALMDFERDDGKTLACCATLQADTTIEADIDEEPDARVIPVRDFAATVSRVEDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H + AGQY+Q+ + VG F +IA+ P+ +A+ E V+ + G T
Sbjct: 121 AIHLQLDKAIDFQAGQYVQVEIPGVGSRAF-SIANHPADVAATKGIELNVRKLPGGAGTT 179
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ LK GD + ++ GR F + + P +L A GSG+S RS+I S
Sbjct: 180 WLHEQLKAGDRLRVAGPYGRFFVRESARQP-----MLFMAGGSGLSSPRSMIVDLLSRGC 234
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
+ L YG R+ + + Y +F+ + + VP LS +P+G +W G G+V A
Sbjct: 235 TLPITLVYGQRSHEELYYDAEFRALAEQHANFTYVPALSHEPEGSDWDGFRGFVHEA--- 291
Query: 252 AKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
AK F G LCG M E S ++
Sbjct: 292 AKAHFGGSFAGQKAYLCGPPPMIEACISTLM 322
>gi|392950986|ref|ZP_10316541.1| oxidoreductase FAD/NAD(P)-binding protein [Hydrocarboniphaga effusa
AP103]
gi|391859948|gb|EIT70476.1| oxidoreductase FAD/NAD(P)-binding protein [Hydrocarboniphaga effusa
AP103]
Length = 352
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 119/275 (43%), Gaps = 38/275 (13%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSID--------ISDA 81
P + +R LA A+ Q V AEI ++ HV D +
Sbjct: 61 PFALMDFEREEGKCLACCAIPQADLVIE----AEIDEDPDARHHVIEDYVGKVSRIVDLT 116
Query: 82 PDIASSHT---------RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG 132
P I + H +AGQY+ +R+ +P ++A PPS A E V+ V G
Sbjct: 117 PTIKAFHIELEGEGLQFQAGQYVNVRIPGEERPRAFSLAQPPSSARE---IELNVRIVPG 173
Query: 133 S--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
T + L+ GD VE++ G GF V R+ P ++ A GSG+S +S+I
Sbjct: 174 GKGTTYLHERLRVGDRVELTGPFG-GFFV-RVSDPR---PLIFMAGGSGLSSPKSMILDL 228
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYV- 245
++ + L YGARN + Y D F+ + + VP LS+ P +W G G+V
Sbjct: 229 IEQGDQRPITLIYGARNRTELYYDDLFQSLAEQHPQFRYVPALSEPTPSCDWHGFKGFVH 288
Query: 246 QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
+AA S + F +G+ LCG M E ++
Sbjct: 289 EAATSLYGQDF--RGSRAYLCGPPPMIEACIRTLM 321
>gi|300088028|ref|YP_003758550.1| response regulator receiver protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527761|gb|ADJ26229.1| response regulator receiver protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 772
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
R GQ++++ V +G+ +SP + FE V++V G+ L L+ G V I
Sbjct: 538 RPGQFVEVYVFGIGESPISLTSSP----TRDHTFEVAVRNV-GNVTGALHRLEPGATVGI 592
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE-RSDVRLYYGARNL 208
G GF ++ ++ D +L A G GI P+RSLI+ ++ + L +GAR+
Sbjct: 593 RGPFGNGFPLEEMEGKD----ILFIAGGIGIFPLRSLIQYVLDRRDAYGHINLLFGARSP 648
Query: 209 KRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ D +EW ++ V + + + D +W+G G + + + F+P+ T ++ G
Sbjct: 649 AERVFADDMQEWSQAPDVTFLETVDRSDDSWTGNVGVITTLIPKVQ--FDPRNTVAIVVG 706
Query: 268 QKQMAEEVTSIVLAEGVSSEKIL 290
M V + + ++ + I+
Sbjct: 707 PPIMYRFVINELKKRDLADDNII 729
>gi|255292522|dbj|BAH89636.1| ferredoxin oxidoreductase [uncultured bacterium]
Length = 353
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQYL L + + + ++A+PPS E V+ V G +T + L GD V
Sbjct: 133 QAGQYLNLELPGIDQARPFSMANPPSRGDT---VELHVRLVPGGEATTYIHEKLAAGDEV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++S GR F V R P ++L A G+G+S + ++ E + L +GARN
Sbjct: 190 KVSGPYGR-FFVRRSAPE----SMLFLAGGTGLSSPKCMVLDLLEHGETRQITLLHGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F+E + +P LS+P + W G TGYV AK F+ + G
Sbjct: 245 LAELYDRELFEELAAKHDNFTYIPALSEPLEEDGWDGATGYVHDV---AKAHFDGEFRGN 301
Query: 262 GVVLCGQKQMAEE-VTSIVLAEGVSSEKILKNF 293
+CG M + +T+++ + ++ F
Sbjct: 302 KAYMCGPPAMIDACITTLIQGRLFERDMYMEKF 334
>gi|154249320|ref|YP_001410145.1| NADH:ubiquinone oxidoreductase subunit F [Fervidobacterium nodosum
Rt17-B1]
gi|154153256|gb|ABS60488.1| NADH:ubiquinone oxidoreductase, subunit F [Fervidobacterium nodosum
Rt17-B1]
Length = 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 40/285 (14%)
Query: 28 RIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISP---AAESLFHVSIDISD---- 80
+P + + ++ + +++ ++ P L I ESL V+ DI +
Sbjct: 92 ELPYMSKEEIQQNIRLSCQIKLKKPIKIYLPEELFNIRKFKGIVESLKDVTYDIKELRIR 151
Query: 81 --APDIASSHTRAGQYLQLRV-----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAG- 132
P+ + +AGQY+QL + V +I+S PS E L++ V G
Sbjct: 152 LVEPN--EINFKAGQYVQLVIPPYENVKESTQRAYSISSAPS---DKNHVELLIRLVPGG 206
Query: 133 -STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI---- 187
+T V +K+GDVVE+ G + D +++ A GSG++PI+S+I
Sbjct: 207 IATTYVHKYMKEGDVVEVVGPFGEFYM------RDTNADMVMVAGGSGMAPIKSIILDML 260
Query: 188 ESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETG 243
E G +++ +V ++GAR+ + + Y + F+E E +P LS P + NW GETG
Sbjct: 261 ERGITNR---NVWYFFGARSKRDLYYVEMFREIEKKWPNFHFIPALSDPLPEDNWDGETG 317
Query: 244 YVQAAFSRAKKIFNPQGT--GVVLCGQKQMAEEVTSIVLAEGVSS 286
+ + + P+ T LCG M + GV
Sbjct: 318 LITNVLDKYLQTVLPKDTPKEGYLCGSPGMINACIQVFEKYGVKD 362
>gi|114331040|ref|YP_747262.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Nitrosomonas eutropha
C91]
gi|114308054|gb|ABI59297.1| oxidoreductase FAD/NAD(P)-binding domain protein [Nitrosomonas
eutropha C91]
Length = 348
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 23/170 (13%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGDV 146
GQY+ + + D + +F S A+A G EFL ++ AG + V +K+ D+
Sbjct: 136 GQYIDILMKDGQRRSF-------SLANAPGNDEFLQLHTRNYAGGVFSEYVFSHMKEKDI 188
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK----ERSDVRLY 202
+ +G F D P ++ P ++ A G+G +P++S++E F ++ + + ++LY
Sbjct: 189 LRFEGPLGSFFLHD--TPKNDTP-IIFLAGGTGFAPVKSMLEYLFYTENTRFKHNKIKLY 245
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAA 248
+GAR + D K+W E+ +PVLS+P NW G+ G V A
Sbjct: 246 WGARTRDGLYLNDLAKKWEEENKNFSYIPVLSEPLLTDNWQGKNGLVHQA 295
>gi|392405784|ref|YP_006442394.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
chubuense NBB4]
gi|392406199|ref|YP_006442809.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
chubuense NBB4]
gi|269980453|gb|ACZ56327.1| putative propane monooxygenase reductase [Mycobacterium chubuense
NBB4]
gi|390618920|gb|AFM20069.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
chubuense NBB4]
gi|390619335|gb|AFM20484.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
chubuense NBB4]
Length = 343
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVE 148
RAGQY + +D G+ ++ SPPS A F +K V G+ VL L+ G +
Sbjct: 134 RAGQYAEF-TLDTGERRSYSLLSPPS---AGNELTFCIKRVQNGAFTTVLDRLEPGSHLN 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G F + +P V+ GSGI+P+ S++ +R YYGAR
Sbjct: 190 LEAPFGTMFLRETARP------VIAVGIGSGIAPLLSILSDAAEQDSDVPIRFYYGARTN 243
Query: 209 KRMAYQDKFKEWES--SGVKIVPVLSQ--PDG-NWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ Y D+ E + + + +P LSQ PD +G G V A A+ I +
Sbjct: 244 SDLVYLDQLAELSTRLTDFQFIPCLSQGTPDTVPPNGRAGRVTRAI--AEDIRDASVYDA 301
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG +M + V ++ A+G+ +I
Sbjct: 302 YLCGAPEMCDAVGRLLEAKGLPEARI 327
>gi|3845550|dbj|BAA34174.1| phenol hydroxylase component [Comamonas testosteroni]
Length = 357
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTV---WTPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q D T+ + P A+I P + V + P I
Sbjct: 61 PFALMDMEREDGMTLACCATLQSDATIEADFEDEPDAQIIPVRDFAAAVVRIVDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRV----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS 133
+ H R AGQY+QLR+ + G +IA+ P + E V+ V G
Sbjct: 121 ALHLRLDQPMRYQAGQYVQLRIPGLSEEQGGSRAFSIANAPGADGCAQEIELNVRLVLGG 180
Query: 134 --TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
T + L +GD ++++ GR F + P ++ A GSG+S R++I
Sbjct: 181 EGTGWLHKHLSEGDSLQLAGPYGRFFVRHSARQP-----MVFMAGGSGLSSPRAMILELL 235
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD-GNWSGETGYVQAA 248
++ + L YG R+ + + Y D+F+ + +P +S D G+W G G+V A
Sbjct: 236 ANGCEQPITLVYGQRSREELYYDDEFRALAAQHPHFTYIPAISGDDCGDWQGARGFVHEA 295
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
++A G LCG M E S ++
Sbjct: 296 -AQAHFQGGFAGCKAYLCGPPPMVEACISTLM 326
>gi|452991091|emb|CCQ97643.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Clostridium
ultunense Esp]
Length = 366
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 21/211 (9%)
Query: 90 RAGQYLQLRV-----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLK 142
+ GQY+QL+ D +IASPPS S + ++ V G +T V LK
Sbjct: 161 KPGQYIQLKAPIYEGNDEEVYRAYSIASPPSEKSY---IDLIIGYVPGGIATTYVHKHLK 217
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
GD V+I+ G D+ +++ A G+G++PI S++ + R Y
Sbjct: 218 VGDTVDINGPYGDFCYQDKYDN-----EMILVAVGTGMAPILSILYHMKDQDIKRKARFY 272
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP 258
+GAR + + D+ KE+E + + +P LS+ + NW+G G V + I NP
Sbjct: 273 FGARTPEDLFLLDELKEFEKALYDFEFIPTLSRALDEHNWTGARGRVNVLLD--EHIKNP 330
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M + V ++ +G+ E I
Sbjct: 331 DDKEAYLCGSPAMIDTVVEVLKEKGILEEHI 361
>gi|146260396|gb|ABQ14524.1| phenol hydroxylase subunit [Alcaligenes faecalis]
Length = 353
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWTPT---PLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P A + P + VS P I
Sbjct: 61 PFALMDFERDDGKTLACCATLQADTTIEADIDEEPDARVIPVRDFAATVSRVEDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H + AGQY+Q+ + VG F +IA+ P+ +A+ E V+ + G T
Sbjct: 121 AIHLQLDKAIDFQAGQYVQVEIPCVGSRAF-SIANQPADVAATKGIELNVRKLPGGAGTT 179
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ LK GD + ++ GR F + + P +L A GSG+S RS+I S
Sbjct: 180 WLHEQLKAGDRLRVAGPYGRFFVRESARQP-----MLFMAGGSGLSSPRSMIVDLLSRGC 234
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
+ L YG R+ + + Y +F+ + + VP LS +P+G +W G G+V A
Sbjct: 235 TLPITLVYGQRSHEELYYDAEFRALAEQHANFTYVPALSHEPEGSDWDGFRGFVHEA--- 291
Query: 252 AKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
AK F G LCG M E S ++
Sbjct: 292 AKAHFGGSFAGQKAYLCGPPPMIEACISTLM 322
>gi|329888758|ref|ZP_08267356.1| phenol hydroxylase P5 protein [Brevundimonas diminuta ATCC 11568]
gi|328847314|gb|EGF96876.1| phenol hydroxylase P5 protein [Brevundimonas diminuta ATCC 11568]
Length = 352
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 28/224 (12%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCG 140
D A +AGQY+ LR+ + +IAS P + E V+ V G TA +
Sbjct: 126 DGAGIDFQAGQYVNLRLPGIEGARAFSIASSP---AEPNLIELHVRRVPGGAGTAWLHDE 182
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP----IRSLIESGFSSKER 196
LK GD + + MGR + + P ++ A GSG+S I L+E G+S
Sbjct: 183 LKTGDRLAFTGPMGRFYVRRSAEKP-----LIFLAGGSGLSSPKGMILDLLEQGYSEP-- 235
Query: 197 SDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRA 252
+ L +G R + + D F+ E E + VP +SQP+ + W GE GYV A A
Sbjct: 236 --ITLLHGGRRPCDLHFGDLFRRLEAEHDNFRYVPAVSQPEADDVWDGEIGYVHEA---A 290
Query: 253 KKIFNPQGTGV--VLCGQKQMAEE-VTSIVLAEGVSSEKILKNF 293
+++F + +G LCG M E VT+++ + ++ F
Sbjct: 291 ERLFEGRFSGCQAYLCGPPPMIEAGVTALMKGRLFERDIFMERF 334
>gi|444308193|ref|ZP_21143843.1| oxidoreductase FAD-binding subunit [Ochrobactrum intermedium M86]
gi|443488479|gb|ELT51231.1| oxidoreductase FAD-binding subunit [Ochrobactrum intermedium M86]
Length = 337
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCG 140
D+AS AGQY QL+ + ++ ++A+ P A EF V+ V G ++ +
Sbjct: 128 DLASVEFAAGQYAQLKFAGLPVRSY-SMANRP----GDDALEFHVRRVPGGATSTYIHEQ 182
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
++ GD V I +G + P +L A GSG++PI+S++E+ R +
Sbjct: 183 VRPGDHVAIEVPLGSSYLRQNHAGP-----ILCIAGGSGLAPIKSIVETALVHGARQPIH 237
Query: 201 LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+Y+G R + + D F E+S ++ PVLS+ G S TGYV A F+
Sbjct: 238 VYFGVREERDLYLLDHFAALEASHPNLRFTPVLSEARGPTSFRTGYVAAVVGEDLTDFD- 296
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
G + G M + + A G+ + +
Sbjct: 297 -GWKAYVAGPPLMVDSAMEMARARGLRQQDM 326
>gi|363421224|ref|ZP_09309312.1| ferredoxin--NAD(+) reductase [Rhodococcus pyridinivorans AK37]
gi|359734617|gb|EHK83589.1| ferredoxin--NAD(+) reductase [Rhodococcus pyridinivorans AK37]
Length = 336
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL++ +D G ++A+PP + + ++ V G + EVL L+KG +
Sbjct: 129 AGQYLKV-FLDDGDSRNYSMANPPH---ENDGVQLHIRHVQGGRFSEEVLRTLEKGSKLR 184
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F+++ PD V+ A+G+G +P++S++E + LY+GAR
Sbjct: 185 IELPYGE-FSLN----PDSDRPVIFVASGTGFAPVKSIVEDRLKRGGERSLHLYWGARRQ 239
Query: 209 KRMAYQDKFKEWE--SSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + + ++W S V PVLS P +W+G TG V A + + + V C
Sbjct: 240 EDIYLPELPEKWASVSDRVSFTPVLSHPAEDWTGRTGLVHRAV--LEDLVDLSDHEVYAC 297
Query: 267 GQKQM 271
G M
Sbjct: 298 GSPAM 302
>gi|121611324|ref|YP_999131.1| oxidoreductase FAD-binding subunit [Verminephrobacter eiseniae
EF01-2]
gi|121555964|gb|ABM60113.1| Oxidoreductase FAD-binding domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 376
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCG-LKKGDVVE 148
AGQY++L + G ++AS P+ EF++K G+ + L G LK G +
Sbjct: 169 AGQYVELTIPGSGITRSFSMASTPN---GQRKLEFVIKKYPNGAFSSQLDGALKPGARLV 225
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + QP P VL+ GSG+SP+ +++ S E +R +YGAR+
Sbjct: 226 AKGPYGTCFRREE-QPG---PMVLV-GGGSGMSPLWAILNDHVQSGEERPIRFFYGARSR 280
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQG-TGV 263
+ + Y D F E E + +P LS +P +WSG TG + RA + G
Sbjct: 281 RDLFYLDDFAELEDKLPDFRFIPALSNAEPGDDWSGATGLIHEVLGRALREQALAGEIDA 340
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GV+ E++
Sbjct: 341 YTCGPTPMIDAVIPVLQMAGVAPERL 366
>gi|407002275|gb|EKE19079.1| response regulator receiver protein [uncultured bacterium]
Length = 329
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 22/247 (8%)
Query: 51 QDTTVWTP--TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL 108
+DT ++ P + +I E+ +++ D + GQ++QL ++ +G+ +
Sbjct: 10 KDTKLYLPERAKVLKIKEFTETEKFFELELLDREKLGHV---PGQFVQLSILGIGEAP-I 65
Query: 109 AIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGF---AVDRIQPP 165
+I+S PS + FE V++V T ++ L +GD++ I G GF +R
Sbjct: 66 SISSAPS---NNNRFEMCVRAVGDVTHKIH-ALHEGDIIHIRGPFGNGFPEKTTERFLGK 121
Query: 166 DEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSG 224
+L G G +P+RSLI +E+ + + YG + K Y + +E +G
Sbjct: 122 H----LLFIVGGLGYAPLRSLINKVVPEREKYKKISVLYGCKTSKDRVYAQELEELRKTG 177
Query: 225 --VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
V+++ + + DG+W G G + + F+PQ T ++ G M + V +L +
Sbjct: 178 DNVELLETVDKADGDWIGSCGVITTLIPKVP--FDPQDTFAIIVGPPIMYKFVLRSLLEK 235
Query: 283 GVSSEKI 289
+ E I
Sbjct: 236 NLPKENI 242
>gi|264679292|ref|YP_003279199.1| Na(+)-translocating NADH-quinonereductase subunit F [Comamonas
testosteroni CNB-2]
gi|262209805|gb|ACY33903.1| Na(+)-translocating NADH-quinonereductase subunit F [Comamonas
testosteroni CNB-2]
Length = 357
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTV---WTPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q D T+ + P A+I P + V + P I
Sbjct: 61 PFALMDMEREDGMTLACCATLQSDATIEADFEDEPDAQIIPVRDFAATVVRIVDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDV----GKPTFLAIASPPSFASASGAFEFLVKSVAGS 133
+ H R AGQY+QLR+ + G +IA+ P + E V+ V G
Sbjct: 121 ALHLRLEQPMRYQAGQYVQLRIPGLSEGQGGSRAFSIANAPGADGCTQEIELNVRLVPGG 180
Query: 134 --TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
T + L +GD ++++ GR F + P ++ A GSG+S R++I
Sbjct: 181 AGTGWLHEHLSEGDSLQLAGPYGRFFVRHSARQP-----MVFMAGGSGLSSPRAMILELL 235
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD-GNWSGETGYVQAA 248
++ + L YG R+ + + Y D+F+ + +P +S D G+W G G+V A
Sbjct: 236 ANGCEQPITLVYGQRSREELYYDDEFRALAAQHPHFTYIPAISGEDCGDWQGARGFVHEA 295
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
++A G LCG M E S ++
Sbjct: 296 -AQAHFQGGFAGCKAYLCGPPPMVEACISTLM 326
>gi|350570483|ref|ZP_08938836.1| phenol hydroxylase P5 protein [Neisseria wadsworthii 9715]
gi|349796108|gb|EGZ49898.1| phenol hydroxylase P5 protein [Neisseria wadsworthii 9715]
Length = 353
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
+AGQY+ L+V V +IA+PPS A E V+ V G A LK+GD +
Sbjct: 133 QAGQYINLQVPGVEGTRAFSIANPPSMADT---VELHVRKVEGGAATTWLHESLKEGDEL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F ++ D + I A GSG+S S+I + + L+ GARN
Sbjct: 190 PLSGPYGQFF----VRKSDGQDAIFI-AGGSGLSSPESMILDLLEEGDSRRIYLFQGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + +++ F++ E +P L+ P+ NW G G+V A + FN + +G
Sbjct: 245 VAELYHRELFEKLAEEHENFHYIPALNAALPEENWEGFNGFVHEAVA---DYFNNRCSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 302 KAYLCGPPPMIEAAITTLM 320
>gi|410461145|ref|ZP_11314798.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Bacillus azotoformans LMG 9581]
gi|409926350|gb|EKN63546.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Bacillus azotoformans LMG 9581]
Length = 340
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
AGQ+ + +V G+ + ++ + + + VK + G + +C LK G V+
Sbjct: 143 AGQFFEFQVQ--GESELRSYSAATRYID-NKKIQLHVKRIPNGIGSNYMCDLKVGATVKA 199
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S G+ +Q D ++ A GSG++PI++L+E FS+ + +YGAR +
Sbjct: 200 SGPYGK------MQLRDRDKDLVFVAGGSGMAPIKALLEEVFSASFDHEAWFFYGARTEQ 253
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + E E +P LS D NWSGE G++ KK+ + G L
Sbjct: 254 DLYLVEDWLELERKYPNFHFIPALSNLSDDSNWSGERGFIADVIK--KKMESCSGMDAYL 311
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG M E VT + +G+ I
Sbjct: 312 CGPPIMCETVTDALYGKGLRGNHI 335
>gi|399021726|ref|ZP_10723818.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Herbaspirillum
sp. CF444]
gi|398090732|gb|EJL81196.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Herbaspirillum
sp. CF444]
Length = 343
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P +A + A+ + +S+ + P +AGQY++ + D GK ++A+ P
Sbjct: 104 PVRVARLDKVADDVIILSLQL---PANDRLQYKAGQYVEFMLRD-GKRRSYSMANAPH-- 157
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
++ + G T +V LK+ D++ +G F + P +++ A
Sbjct: 158 -KDEHLTLHIRHMPGGLFTDQVFSTLKERDILRFEGPLGTFFLREDSDKP-----IVLLA 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS- 232
+G+G +PI++++E SK V LY+G R + + + K W + K VPV+S
Sbjct: 212 SGTGFAPIKAIVEQLEHSKSTRPVTLYWGGRRPQDLYMDELCKSWTQTLPNFKYVPVISN 271
Query: 233 -QPDGNWSGETGYVQAA 248
QP+ NWSG +G+V A
Sbjct: 272 AQPEDNWSGRSGFVHQA 288
>gi|392396123|ref|YP_006432724.1| flavodoxin reductase family protein [Flexibacter litoralis DSM
6794]
gi|390527201|gb|AFM02931.1| flavodoxin reductase family protein [Flexibacter litoralis DSM
6794]
Length = 360
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVE 148
AGQ+L L V D + S S +K V G L LK GD +E
Sbjct: 38 AGQFLTLIVKDTNGKKYRRAYSLCSAPHLDSMLAVTIKRVEGGIVSNLLNDTLKAGDKLE 97
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I + +G F + R P D +++F GSGI+P+ S+++ S ++ S V L Y RN
Sbjct: 98 IMEPIG-NFVL-RTHP-DNKRHIVLFGGGSGITPLMSMLKVALSYEQNSVVSLIYTCRNE 154
Query: 209 KRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRA------KKI---F 256
+ + ++ DK KE ++ VL+QP + S + Y + S+ +K+
Sbjct: 155 ESIIFKNQLDKLKEKHGDRFNLIYVLTQPKTDLSNQDNYFEGRISKEFIKNTLEKLPNTN 214
Query: 257 NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK-NF 293
N + LCG + M E + + +S + + K NF
Sbjct: 215 NLEDKIFYLCGPEGMMETIQETLSEINISKDTVHKENF 252
>gi|296132196|ref|YP_003639443.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thermincola potens JR]
gi|296030774|gb|ADG81542.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thermincola
potens JR]
Length = 276
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 78 ISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV 137
+D + + Q++++ V+ VG+ +SP S G E +K V G EV
Sbjct: 30 FTDPEEQKRFQYKPAQFVEISVLGVGEAPISITSSP----SQQGFLELSIKRV-GKLTEV 84
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ER 196
+ LK GD V I G GF D ++ D +L A G G++P+RSLI ++ +
Sbjct: 85 IHQLKPGDEVGIRGPYGNGFPADELKGFD----LLFVAGGIGLAPLRSLINWVMDNRQDY 140
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKI 255
V++ YGAR + + + W +++ + + D W G G V R +
Sbjct: 141 GKVKILYGARTPGDIVFTRELTRWAGEPDTEVLYTVDRGDPQWQGNVGLVTQLLHRIE-- 198
Query: 256 FNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
P +CG M V +LA G E I+
Sbjct: 199 LTPATYTAFICGPPVMIPFVIKDLLALGFKEENII 233
>gi|118595093|ref|ZP_01552440.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylophilales bacterium HTCC2181]
gi|118440871|gb|EAV47498.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylophilales bacterium HTCC2181]
Length = 406
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LKKGD V IS G FA E +IF G+G++P+RSLI
Sbjct: 240 AGKMSSYIFNLKKGDEVTISGPFGDFFA-------RETKKEMIFVGGGAGMAPMRSLIFD 292
Query: 190 GFSSKERSDVR--LYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETG 243
F + R+D + +YGAR+ K M Y + F KE E+ + S P+ W G G
Sbjct: 293 QF-KRVRTDRKASFWYGARSKKEMFYTEDFETIEKENENFSFNVALSDSLPEDEWDGHKG 351
Query: 244 YVQAA-FSRAKKIF-NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ F + K +P+ LCG M E VT +++ GV E I+
Sbjct: 352 FIHNVLFEQYLKDHPSPEDCEYYLCGPPIMNESVTKMLIDLGVDGEDIM 400
>gi|389843710|ref|YP_006345790.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Mesotoga prima MesG1.Ag.4.2]
gi|387858456|gb|AFK06547.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Mesotoga prima MesG1.Ag.4.2]
Length = 366
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 32/285 (11%)
Query: 28 RIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISP---AAESLFHVSIDISDAP-D 83
+P L K ++ + V+ D ++ P L I + S+ V+ DI + D
Sbjct: 91 ELPYLSEKEKKNNIRLSCQIKVKSDISIEIPEELFNIMEYIASVSSITDVTHDIKEVFFD 150
Query: 84 IASS-HTRAGQYLQLRV---VDVGKPTFLA--IASPPSFASASGAFEFLVKSVAGS--TA 135
+ +AGQY+QL V D+ T A ++S PS S E L++ V T
Sbjct: 151 LEDEIEFKAGQYVQLIVPAYGDIKGETMRAYSMSSQPSVKSG---VELLIRLVPNGIVTT 207
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
V LK G+ + I G + D ++ A GSG++PI+S+I +
Sbjct: 208 YVHKMLKVGERIRILGPFGDFYL------RDTDSDIIFIAGGSGMAPIKSIIFDMMEREV 261
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
+ + ++GAR+ + + Y ++ KE E +P LS P+ NW GETG + R
Sbjct: 262 KRNAYYFFGARSKRDLFYLEEMKEVERKMPNFHFIPALSDPLPEDNWEGETGLITDVVDR 321
Query: 252 AKKIFNPQGTGV----VLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ QG + LCG M ++ V EKI +
Sbjct: 322 Y---LSEQGDEIDREAYLCGSPGMINACIRVLTRHKVLEEKIFYD 363
>gi|332159307|ref|YP_004424586.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus sp. NA2]
gi|331034770|gb|AEC52582.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus sp. NA2]
Length = 292
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P +A + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPKLAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRRGFFELCIRR-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGAAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D NW G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPNWPGLKGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKAVFESLINYGYRPENI 243
>gi|429213992|ref|ZP_19205156.1| phenol hydroxylase subunit PhcP [Pseudomonas sp. M1]
gi|68250346|gb|AAY88745.1| phenol hydroxylase subunit [Pseudomonas sp. M1]
gi|428155587|gb|EKX02136.1| phenol hydroxylase subunit PhcP [Pseudomonas sp. M1]
Length = 353
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L++ + ++A+PPS E V+ V G +T + GL++GD V
Sbjct: 133 QAGQYVNLQLPGIEGTRAFSLANPPSRPDE---VELHVRLVEGGAATGFIHDGLREGDAV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+S G+ F V Q D ++ A GSG+S +S+I + + L+ GAR
Sbjct: 190 EVSGPYGQ-FFVRGSQAGD----LIFIAGGSGLSSPQSMILDLLEQGDARRITLFQGART 244
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
+ ++ F+E + + VP LSQ DG WSG GYV A AKK F+ + G
Sbjct: 245 RAELYNRELFEELATRYANFTYVPALSQAAEDGQWSGFRGYVHDA---AKKHFDGRFGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + + ++
Sbjct: 302 KAYLCGPPPMIDAAITCLM 320
>gi|107023428|ref|YP_621755.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
AU 1054]
gi|116690510|ref|YP_836133.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
HI2424]
gi|170733851|ref|YP_001765798.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
MC0-3]
gi|254247448|ref|ZP_04940769.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding [Burkholderia
cenocepacia PC184]
gi|421866502|ref|ZP_16298169.1| CDP-6-deoxy-delta-3,4-glucoseen reductase( EC:1.18.1.3 )
[Burkholderia cenocepacia H111]
gi|105893617|gb|ABF76782.1| oxidoreductase FAD/NAD(P)-binding protein [Burkholderia cenocepacia
AU 1054]
gi|116648599|gb|ABK09240.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
cenocepacia HI2424]
gi|124872224|gb|EAY63940.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding [Burkholderia
cenocepacia PC184]
gi|169817093|gb|ACA91676.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
cenocepacia MC0-3]
gi|358073527|emb|CCE49047.1| CDP-6-deoxy-delta-3,4-glucoseen reductase( EC:1.18.1.3 )
[Burkholderia cenocepacia H111]
Length = 343
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE S + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHSGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLAELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|251771444|gb|EES52023.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptospirillum
ferrodiazotrophum]
Length = 244
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 18/241 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDV----GKPTFLAIA---SP 113
LAE+ P VS + P+ A +GQ+ L + D G+P A + SP
Sbjct: 11 LAEVLPETP---RVSTFVVRLPEEAEFSFVSGQFAMLSLPDFLNDKGRPVRRAYSIASSP 67
Query: 114 PSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLI 173
A + +F K G + + + GD V + G F +D P D P + I
Sbjct: 68 HDLARKTLSFTITRKGEGGLFSNRIHEARAGDPVSVEGPYGSSFVLD---PQDPRPHLFI 124
Query: 174 FATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVL 231
A GSGI+P+RS+I + S + + L YG R + Y + +E S +
Sbjct: 125 -AAGSGIAPLRSMIRTLLSKEAPPPIELLYGFRGEEDFIYAQELTGYEKSVPNFSLKTAH 183
Query: 232 SQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
S+P +W+G +G V R + +G V +CG +M + + G E + K
Sbjct: 184 SRPSSHWTGLSGRVPELLPRLYPSY--KGQVVYMCGHPEMVTQTVEWLGTAGFPEEAVRK 241
Query: 292 N 292
Sbjct: 242 E 242
>gi|206561038|ref|YP_002231803.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
J2315]
gi|444363376|ref|ZP_21163807.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
BC7]
gi|444366186|ref|ZP_21166270.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
K56-2Valvano]
gi|198037080|emb|CAR53001.1| putative oxidoreductase [Burkholderia cenocepacia J2315]
gi|443595139|gb|ELT63744.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
BC7]
gi|443604981|gb|ELT72865.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia cenocepacia
K56-2Valvano]
Length = 343
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE S + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHSGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLAELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|114564551|ref|YP_752065.1| FMN reductase [Shewanella frigidimarina NCIMB 400]
gi|114335844|gb|ABI73226.1| oxidoreductase FAD/NAD(P)-binding domain protein [Shewanella
frigidimarina NCIMB 400]
Length = 232
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 19/185 (10%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +++P ++++ V + A D +AGQYL + + + K F +IAS P+ +
Sbjct: 8 IEKVTPFNDAVYQVFLKPEAAFDF-----KAGQYLTVVMGEKDKRPF-SIASAPN----A 57
Query: 121 GAFEFLVKSVAGST--AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E + + + +V+ L+ ++I G F ++ P +LI A G+
Sbjct: 58 ALIELHIGAAVSESYPMQVVERLQTATHIDIEAPAGDAF----LRSDSHRPRILI-AGGT 112
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDG 236
G S I+S++E+ ++ E + +LY+G RN + M YQD ++W + S ++ +PV+ DG
Sbjct: 113 GFSYIKSIVEAQIANGETINTKLYWGCRNEEAMYYQDIARQWHADHSWLEFIPVVELADG 172
Query: 237 NWSGE 241
NW G+
Sbjct: 173 NWEGK 177
>gi|299531810|ref|ZP_07045212.1| Na(+)-translocating NADH-quinonereductase subunit F [Comamonas
testosteroni S44]
gi|298720251|gb|EFI61206.1| Na(+)-translocating NADH-quinonereductase subunit F [Comamonas
testosteroni S44]
Length = 357
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 27/272 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTV---WTPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q D T+ + P A+I P + V + P I
Sbjct: 61 PFALMDMEREDGMTLACCATLQSDATIEADFEDEPDAQIIPVRDFAATVVRIVDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRV----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS 133
+ H R AGQY+QLR+ + G +IA+ P + E V+ V G
Sbjct: 121 ALHLRLDQSMRYQAGQYVQLRIPGLSEEQGGSRAFSIANAPGADGCAQEIELNVRLVPGG 180
Query: 134 --TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
T + L +GD ++++ GR F + P ++ A GSG+S R++I
Sbjct: 181 AGTGWLHEHLSEGDSLQLAGPYGRFFVRHSARQP-----MVFMAGGSGLSSPRAMILELL 235
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQPD-GNWSGETGYVQAA 248
++ + L YG R+ + + Y D+F+ + +P +S D G+W G G+V A
Sbjct: 236 ANGCEQPITLVYGQRSREELYYDDEFRVLAAQHPHFTYIPAISGEDCGDWQGARGFVHEA 295
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
++A G LCG M E S ++
Sbjct: 296 -AQAHFQGGFAGCKAYLCGPPPMVEACISTLM 326
>gi|378718669|ref|YP_005283558.1| phenol hydroxylase P5 protein MphP [Gordonia polyisoprenivorans
VH2]
gi|375753372|gb|AFA74192.1| phenol hydroxylase P5 protein MphP [Gordonia polyisoprenivorans
VH2]
Length = 354
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I A V +DI + D + AGQY+++ V G+ ++A+PP+ AS
Sbjct: 121 IETVAHDTVTVLVDIDEPLDFS-----AGQYMEIAVPGTGEWRQYSMANPPASASR---L 172
Query: 124 EFLVKSVAGSTAE---VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
EF ++ V G A + GL G +E+ G FA + E P +L+ A G+G+
Sbjct: 173 EFQIRRVPGGVATDGWIFGGLDVGHELEMRGPWGD-FAYEPGADEPETP-MLLLAGGTGL 230
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE--WESSGVKIVPVLSQPDGNW 238
+P+ S+ + ++ LY+G R+ + +Q ++E G+ VP LS+ + W
Sbjct: 231 APLTSIAVQALTDDPDREIHLYHGVRHEADLYHQQFWREVAERHRGLTYVPCLSRSE--W 288
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
G TGYV A + +G LCG M +
Sbjct: 289 DGRTGYVGDAV--LDDFASLRGYVAYLCGPPAMVD 321
>gi|17826941|dbj|BAB79284.1| phenol hydroxylase subunit PhkF [Burkholderia kururiensis]
Length = 358
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 35 KPQRRRLATLAA----AAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIAS---- 86
+ +R+ LA A A + D P AE+ P + VS + P I +
Sbjct: 69 REERKALACCATLTSDAVIEADVE---EDPDAEVIPVKDFTAEVSRIVQLTPTIKAIYLR 125
Query: 87 ----SHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG 140
H +AGQY+QL + + + ++A+ P+ +A+G E V+ V G TA +
Sbjct: 126 LDDAFHFQAGQYVQLEIPGLHQSRAFSVANAPADVAATGEIELNVRQVPGGVGTAYLHEQ 185
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L GD V +S GR F P ++ A GSG+S RS+I +
Sbjct: 186 LAVGDRVTLSGPYGRFFVRKSAHVP-----MIFMAGGSGLSSPRSMILDLLQGGATEPIT 240
Query: 201 LYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGET-GYVQAAF-SRAKKIF 256
L YG RN + Y D F+E + + VP LS+ +T G V F A K+
Sbjct: 241 LVYGQRNAAELYYDDAFRELARQYPNFRYVPALSEGGAGAGMQTHGAVAHGFVHEAAKVH 300
Query: 257 ---NPQGTGVVLCGQKQMAEEVTSIVL 280
N G LCG M + + ++
Sbjct: 301 FDNNFAGHKAYLCGPPAMIDACITTLM 327
>gi|359764475|ref|ZP_09268321.1| putative phenol hydroxylase reductase component [Gordonia
polyisoprenivorans NBRC 16320]
gi|359318221|dbj|GAB21154.1| putative phenol hydroxylase reductase component [Gordonia
polyisoprenivorans NBRC 16320]
Length = 354
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I A V +DI + D + AGQY+++ V G+ ++A+PP+ AS
Sbjct: 121 IETVAHDTVTVLVDIDEPLDFS-----AGQYMEIAVPGTGEWRQYSMANPPASASR---L 172
Query: 124 EFLVKSVAGSTAE---VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
EF ++ V G A + GL G +E+ G FA + E P +L+ A G+G+
Sbjct: 173 EFQIRRVPGGVATDGWIFGGLDVGHELEMRGPWGD-FAYEPGADEPETP-MLLLAGGTGL 230
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKE--WESSGVKIVPVLSQPDGNW 238
+P+ S+ + ++ LY+G R+ + +Q ++E G+ VP LS+ + W
Sbjct: 231 APLTSIAVQALTDDPDREIHLYHGVRHEADLYHQQFWREVAERHRGLTYVPCLSRSE--W 288
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
G TGYV A + +G LCG M +
Sbjct: 289 DGRTGYVGDAV--LDDFASLRGYVAYLCGPPAMVD 321
>gi|255293238|dbj|BAH90328.1| ferredoxin oxidoreductase [uncultured bacterium]
Length = 354
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 115/269 (42%), Gaps = 24/269 (8%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P A+I P + V P I
Sbjct: 61 PFALMDFERDEGKTLACCATLQCDTTIEADIDEEPDAQIIPVRDFAATVERIERLTPTIK 120
Query: 86 SSHTRA--------GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H R GQY+QL + +G+ +IA+ P E V+ V G T
Sbjct: 121 ALHLRLDKPIRFQPGQYVQLEIPGLGQSRAFSIANAPGADGECAQVELNVRHVPGGAGTT 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L++G + ++ GR F + P ++ A GSG+S RS+I + +
Sbjct: 181 WLHEQLQEGARLRLAGPYGRFFVRRSARLP-----MVFLAGGSGLSSPRSMIHALLAGGC 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
V L YG R+ + Y D+F+ + VP LS +P+G +WSG G+V A ++
Sbjct: 236 TEPVTLVYGQRSRDELYYDDEFRALAQQHPQFTYVPSLSAEPEGSDWSGARGFVHQA-AQ 294
Query: 252 AKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
A N G LCG M E + ++
Sbjct: 295 AHFQGNFAGHKAYLCGPPPMVEACIATLM 323
>gi|91784951|ref|YP_560157.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia xenovorans
LB400]
gi|91688905|gb|ABE32105.1| Putative Ferredoxin--NAD(+) oxidoreductase [Burkholderia xenovorans
LB400]
Length = 343
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +P++++IE + LY+GAR
Sbjct: 190 FEAPLGTFF----LREDSDKPIVLL-ASGTGFAPLKAIIEHAVFKNLNRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDAGDAWTGRVGFVHRA 288
>gi|385208305|ref|ZP_10035173.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
gi|385180643|gb|EIF29919.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
Length = 343
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +P++++IE + LY+GAR
Sbjct: 190 FEAPLGTFF----LREDSDKPIVLL-ASGTGFAPLKAIIEHAVFKNLNRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDAGDAWTGRVGFVHRA 288
>gi|402565737|ref|YP_006615082.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Burkholderia cepacia GG4]
gi|402246934|gb|AFQ47388.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
cepacia GG4]
Length = 343
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE S + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHSGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDAADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|126462275|ref|YP_001043389.1| oxidoreductase FAD/NAD(P)-binding subunit [Rhodobacter sphaeroides
ATCC 17029]
gi|126103939|gb|ABN76617.1| oxidoreductase FAD/NAD(P)-binding domain protein [Rhodobacter
sphaeroides ATCC 17029]
Length = 365
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 91 AGQYLQLRVVDVGKPTF---LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V T ++A+PPS + G F++K G + L G++ G
Sbjct: 150 AGQYVDITVTTEEGETITRSFSMANPPSETQSLG---FIIKKYPDGKFSNQLDSGGIRLG 206
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V ++ G F + P V++ GSG+SP+ S+++ +S E +V +YG
Sbjct: 207 AEVTVTGPYGMCFRREGRDGP-----VILVGAGSGMSPVWSILQDHLASGEAREVLFFYG 261
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQG 260
AR + + + D+ + V+ +PVLS D W+GE G+V A SR + +G
Sbjct: 262 ARTPEDLFHLDEIGALTEAHPSVRFIPVLSHASIDCGWTGERGFVHEAVSRVLREEGLEG 321
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G V CG M + + ++ SE+I
Sbjct: 322 QGDVYACGPPPMIDALQPVLFMLDFDSERIF 352
>gi|134298019|ref|YP_001111515.1| oxidoreductase FAD/NAD(P)-binding subunit [Desulfotomaculum
reducens MI-1]
gi|134298026|ref|YP_001111522.1| oxidoreductase FAD/NAD(P)-binding subunit [Desulfotomaculum
reducens MI-1]
gi|134050719|gb|ABO48690.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfotomaculum
reducens MI-1]
gi|134050726|gb|ABO48697.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfotomaculum
reducens MI-1]
Length = 275
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 114/241 (47%), Gaps = 19/241 (7%)
Query: 56 WTPTPLA---EISPAAESLFHV-SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
+ P P+ + ++ L H +++ + D AS GQ+ +L V G+ F IA
Sbjct: 5 YLPLPMKLVKNFTETSDKLIHTFTLEFQNEQDAASFQYEPGQFAELMVYGKGEAPF-GIA 63
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P+ G +F V V G + L L++G +V + +G + +++++ ++
Sbjct: 64 SSPT---EKGILKFSVAKV-GVVSTALHMLEEGAIVGVRGPLGNSYPLEQLKGK----SL 115
Query: 172 LIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVP 229
I G + +RS I+ +++ + D+ + YGARN + Y+D+ EWE+ S + ++
Sbjct: 116 TIIGGGFAFTTLRSTIQYILANRGDYGDLTVIYGARNPGLLLYKDELAEWEARSDINLIT 175
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + W+G G++ K P+ ++CG M + +++ G + ++I
Sbjct: 176 TIDREVEGWNGRVGFIPT----VTKDVAPKTDYAIICGPPVMIKFTMPVLVECGFTPDRI 231
Query: 290 L 290
+
Sbjct: 232 I 232
>gi|171060032|ref|YP_001792381.1| oxidoreductase FAD/NAD(P)-binding subunit [Leptothrix cholodnii
SP-6]
gi|170777477|gb|ACB35616.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptothrix
cholodnii SP-6]
Length = 354
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 113/271 (41%), Gaps = 28/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWTPT---PLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA Q D T+ P AE+ P + V+ + P I
Sbjct: 61 PFALMDFERDEGKALACCCTLQSDVTIEADIEEEPDAEVIPVRDFAASVTRIVDLTPTIK 120
Query: 86 SSHT--------RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STA 135
+ H +AGQY+Q+ + +G+ +IA+ P+ SG E V+ VAG T
Sbjct: 121 ALHLALDKPIGFQAGQYVQIEIPGLGQSRAFSIANSPAAVEKSGEIELNVRIVAGGAGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L+ GD + ++ GR F P +L A GSG+S RS+I
Sbjct: 181 YLHQQLQVGDRLRLAGPYGRFFVRRSAGKP-----MLFMAGGSGLSSPRSMIVDLLEGGC 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDGN-WSGETGYVQAAFSR 251
+ L YG R+ + Y +F+ + VP LS + +G+ W+G GYV A
Sbjct: 236 TLPITLVYGQRSRDELYYDAEFRALAEQHPNFSYVPALSNEAEGSGWTGARGYVHDA--- 292
Query: 252 AKKIFNP--QGTGVVLCGQKQMAEEVTSIVL 280
AK F QG LCG M E ++
Sbjct: 293 AKAHFGGSFQGQQAYLCGPPPMVEACIGTLM 323
>gi|172061450|ref|YP_001809102.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia ambifaria
MC40-6]
gi|171993967|gb|ACB64886.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria MC40-6]
Length = 343
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDLYLGELAEQWAREIPNFKYVPVLSEPDNADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|383790999|ref|YP_005475573.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Spirochaeta africana DSM 8902]
gi|383107533|gb|AFG37866.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Spirochaeta africana DSM 8902]
Length = 374
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 78 ISDAPDIASSHTRAGQYLQLRV---VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS- 133
+ + P+ S GQY+QL V + +PT A S S S G EFL++ V G
Sbjct: 151 LVELPEGESVDYVPGQYMQLEVPGYDKIKEPTMRAY-SLSSTPSDKGHVEFLIRLVPGGI 209
Query: 134 -TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS----LIE 188
T V LK+G+ + + G + D P ++ A GSG++P +S +IE
Sbjct: 210 VTTYVHEHLKEGEKLNVVGPFGDFYVQDNDSP------MICVAGGSGMAPFKSIFNHMIE 263
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGY 244
+G E DV ++GAR ++ M Y D +E + + LS+ P+ +W GETG
Sbjct: 264 TG--EIETRDVWYFFGARAVRDMFYLDWLRELDKKYEHFHFIAALSEPLPEDHWEGETGL 321
Query: 245 VQAAFSRAKKIFNP--QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ ++ + P Q LCG M + +++ + EKI
Sbjct: 322 ITDVLAKYLETIIPDEQSKEGYLCGSPGMLDACMAVMRKYKMQEEKI 368
>gi|6505661|dbj|BAA87873.1| phenol hydroxylase subunit [Comamonas testosteroni]
Length = 357
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTV---WTPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q D T+ + P A+I P + V + P I
Sbjct: 61 PFALMDMEREDGMTLACCATLQSDATIEADFEDEPDAQIIPVRDFAATVVRIVDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRV----VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS 133
+ H R AGQY+QLR+ + G +IA+ P + E V+ V G
Sbjct: 121 ALHLRLDQSMRYQAGQYVQLRIPGLSEEQGGSRAFSIANAPGADGCAQEIELNVRLVPGG 180
Query: 134 --TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
T + L +GD ++++ GR F P ++ A GSG+S R++I
Sbjct: 181 AGTGWLHEHLSEGDSLQLAGPYGRFFVRHSACQP-----MVFMAGGSGLSSPRAMILELL 235
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD-GNWSGETGYVQAA 248
++ + L YG R+ + + Y D+F+ + +P +S D G+W G G+V A
Sbjct: 236 ANGCEQPITLVYGQRSREELYYDDEFRALAAQHPHFTYIPAISGEDCGDWQGARGFVHEA 295
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
++A G LCG M E S ++
Sbjct: 296 -AQAHFQGGFAGCKAYLCGPPPMVEACISTLM 326
>gi|78063813|ref|YP_373721.1| oxidoreductase FAD/NAD(P)-binding [Burkholderia sp. 383]
gi|77971698|gb|ABB13077.1| phenol 2-monooxygenase P5 subunit [Burkholderia sp. 383]
Length = 354
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 100/253 (39%), Gaps = 42/253 (16%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVW----TPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A Q TV P AEI P + V+ P I
Sbjct: 61 PFALMDFEREEGKALACCATLQADTVIEADVDEEPDAEIIPVKDFAADVTRIEQLTPTIK 120
Query: 86 SS--------HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STA 135
S H +AGQY+QL + +G+ +IA+ P+ +A+G E V+ V G T
Sbjct: 121 SIRLKLSQPIHFQAGQYVQLEIPGLGQSRAFSIANSPADVAATGEIELNVRQVPGGLGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L GD V +S GR F P ++ A GSG+S RS+I
Sbjct: 181 YLHEQLAAGDRVRLSGPYGRFFVRRSAALP-----MIFMAGGSGLSSPRSMIADLLDGGI 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQP------------------- 234
+ + L YG RN K + Y D+F+ VP LS+
Sbjct: 236 TAPITLVYGQRNAKELYYHDEFRALAERYPNFTYVPALSEGAADAGGGIAQGFVHDVANA 295
Query: 235 --DGNWSGETGYV 245
DG++SG Y+
Sbjct: 296 HFDGDFSGHQAYL 308
>gi|39995196|ref|NP_951147.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter sulfurreducens PCA]
gi|409910644|ref|YP_006889109.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter sulfurreducens KN400]
gi|39981958|gb|AAR33420.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter sulfurreducens PCA]
gi|298504200|gb|ADI82923.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter sulfurreducens KN400]
Length = 280
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF IAS P+ G E ++V G E L L+ GD + +
Sbjct: 44 RAGQFAEYSAFGAGEATF-CIASAPT---RQGYIECCFRAV-GRVTEALRSLETGDTIGV 98
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
G F V+ + L+F A G + P+R+LI +E+ D+ + YGAR
Sbjct: 99 RGPYGNSFPVEEF-----FGKNLVFVAGGIALPPLRTLIWQCLDWREKFGDITIVYGART 153
Query: 208 LKRMAYQDKFKEWES-SGVKIVPVLSQPDGN---WSGETGYVQAAFSRA 252
+ Y+ + +EWE S V++V + P GN W G+ G+V +A
Sbjct: 154 EADLVYKRELREWEERSDVRLVKTVD-PGGNSPSWDGQVGFVPTVLEQA 201
>gi|221639274|ref|YP_002525536.1| Oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Rhodobacter sphaeroides KD131]
gi|332558297|ref|ZP_08412619.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Rhodobacter
sphaeroides WS8N]
gi|221160055|gb|ACM01035.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Rhodobacter
sphaeroides KD131]
gi|332276009|gb|EGJ21324.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Rhodobacter
sphaeroides WS8N]
Length = 365
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 91 AGQYLQLRVVDVGKPTF---LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V T ++A+PPS + G F++K G + L G++ G
Sbjct: 150 AGQYVDITVTTEEGETITRSFSMANPPSETQSLG---FIIKKYPDGKFSNQLDSGGIRLG 206
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V ++ G F + P V++ GSG+SP+ S+++ +S E +V +YG
Sbjct: 207 AEVTVTGPYGMCFRREGRDGP-----VILVGAGSGMSPVWSILQDHLASGEAREVLFFYG 261
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQG 260
AR + + + D+ + V+ +PVLS D W+GE G+V A SR + +G
Sbjct: 262 ARTPEDLFHLDEIGALTEAHPSVRFIPVLSHASIDCGWTGERGFVHEAVSRILREEGLEG 321
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G V CG M + + ++ SE+I
Sbjct: 322 QGDVYACGPPPMIDALQPVLFMLDFDSERIF 352
>gi|337284322|ref|YP_004623796.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus yayanosii CH1]
gi|334900256|gb|AEH24524.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus yayanosii CH1]
Length = 292
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P +A + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPKLAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRRGFFELCIRR-AGRVTTVI 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS ++ R
Sbjct: 95 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGAAPLRSAFLYAMDNRWRYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPDWPGLHGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKAVFESLINYGYRPENI 243
>gi|333978869|ref|YP_004516814.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333822350|gb|AEG15013.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 283
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 78 ISDAPDIASS-HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE 136
+ D P++ + + GQ QL V VG+ T +SP + G EF VK V G
Sbjct: 33 VFDDPEVMENFRQKPGQVAQLSVFGVGEATISITSSP----TRKGILEFSVKKV-GMLTS 87
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
L L+ G+ V I G F + ++ D +L G G++P+R+LI+ + + R
Sbjct: 88 ALHRLEPGNKVGIRGPYGNHFPYEVMKGKD----LLFIGGGIGLAPLRALIDFVLAEENR 143
Query: 197 SD---VRLYYGARNLKRMAYQ-DKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSR 251
D V + YGAR++ + ++ D W + G + + + + W G G+V A
Sbjct: 144 RDYGKVDIIYGARSMDDLCFKYDILDRWPQMPGTTVYTTIDRTEPGWEGHVGFVPAYLEE 203
Query: 252 AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+P+ + CG M + V + G S ++++
Sbjct: 204 INP--SPENKYAITCGPPIMIKFVLQALEKMGFSDDQVI 240
>gi|416943112|ref|ZP_11934685.1| oxidoreductase FAD/NAD(P)-binding protein [Burkholderia sp. TJI49]
gi|325524199|gb|EGD02335.1| oxidoreductase FAD/NAD(P)-binding protein [Burkholderia sp. TJI49]
Length = 354
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 111/271 (40%), Gaps = 28/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVW----TPTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A Q TV P AEI P + V+ P I
Sbjct: 61 PFALMDFEREEGKALACCATLQADTVIEADVDEDPDAEIIPVRDFAADVTRIEQLTPTIK 120
Query: 86 SS--------HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STA 135
S H +AGQY+QL + +G+ +IA+ P+ +A+G E V+ V G T
Sbjct: 121 SIRLKLSQPIHFQAGQYVQLEIPGLGQSRAFSIANAPADVAATGEIELNVRQVPGGLGTG 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L GD V +S GR F P ++ A GSG+S RS+I +S
Sbjct: 181 YLHERLATGDRVRLSGPYGRFFVRRSAALP-----MIFMAGGSGLSSPRSMIADLLASGV 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
+ + L YG RN K + Y +F+ VP LS+ D G+V
Sbjct: 236 TAPITLVYGQRNAKELYYHGEFRALAERYPNFTYVPALSEGAADAGDGIAQGFVHDV--- 292
Query: 252 AKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
AK F+ +G LCG M + + ++
Sbjct: 293 AKAHFDGDFSGHQAYLCGPPAMIDACITALM 323
>gi|119952282|ref|YP_950119.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Arthrobacter aurescens TC1]
gi|119951412|gb|ABM10322.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Arthrobacter aurescens TC1]
Length = 326
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 34/249 (13%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDA----PDIASSHTRAGQYLQLRVVDVGKPTF 107
D T + PT ++ + + +S DI++ P + AGQYL + + D G+
Sbjct: 85 DWTKYDPTSRKKLDAKIKKINWLSTDIAELVLRFPIGVRAIFNAGQYLNI-IFD-GQTRS 142
Query: 108 LAIASPPSFASAS---------GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFA 158
++A+PP + + G F + A ++L + GDV
Sbjct: 143 YSMANPPHKNAEAVLHVRKYEGGLFSDAFLANASPNEKILVEVPFGDV---------QLT 193
Query: 159 VDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK 218
+D +P +++ ATG+G +P++S++E+ + V ++G R+ + D K
Sbjct: 194 LDSHEP------LIMLATGTGFAPVKSIMENLIHLNIKRPVHFFWGGRHEPDLYMSDLVK 247
Query: 219 EWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVT 276
W PVLSQP W+GETG+VQ+A K + V CG +M +
Sbjct: 248 SWNEKLDWFTYTPVLSQPPEGWAGETGWVQSA--ALKHLKGHTQCSVYACGSNKMVSDAR 305
Query: 277 SIVLAEGVS 285
+ + G+
Sbjct: 306 DLFIDAGLD 314
>gi|416917387|ref|ZP_11932298.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. TJI49]
gi|325527358|gb|EGD04715.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. TJI49]
Length = 343
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGARRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHAGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDAADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|121592646|ref|YP_984542.1| FAD/NAD(P)-binding oxidoreductase subunit [Acidovorax sp. JS42]
gi|120604726|gb|ABM40466.1| phenol 2-monooxygenase P5 subunit [Acidovorax sp. JS42]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 117/271 (43%), Gaps = 29/271 (10%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWTPT---PLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P A + P + VS P I
Sbjct: 61 PFALMDFERDDGKTLACCATLQADTTIEADIDEEPDARVIPVRDFAATVSRIEDLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H + AGQY+Q+ + VG F +IA+ P+ A+ E V+ + G T
Sbjct: 121 AIHLQLDKAIDFQAGQYVQVEIPGVGSRAF-SIANHPADVVATKGIELNVRKLPGGAGTT 179
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ LK GD + ++ GR F + P +L A GSG+S RS+I S
Sbjct: 180 WLHEQLKAGDRLRVAGPYGRFFVRESACQP-----MLFMAGGSGLSSPRSMIVDLLSRGC 234
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
+ L YG R+ + + Y +F+ + + VP LS +P+G +W G G+V A
Sbjct: 235 TLPITLVYGQRSHEELYYDAEFRALAEQHANFTYVPALSHEPEGSDWDGFRGFVHEA--- 291
Query: 252 AKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
AK F G LCG M E S ++
Sbjct: 292 AKAHFGGSFAGQKAYLCGPPPMIEACISTLM 322
>gi|223478861|ref|YP_002582965.1| sulfhydrogenase I subunit gamma [Thermococcus sp. AM4]
gi|214034087|gb|EEB74913.1| Sulfhydrogenase I subunit gamma [Thermococcus sp. AM4]
Length = 294
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P+IA + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 42 EDPEIAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRRGFFELCIRK-AGRVTTVV 96
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
L+ GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 97 HRLQPGDTVLVRGPYGNGFPVDDWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 152
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 153 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPDWPGRHGRPQKFIVEAN 211
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 212 T--NPKKTAVAICGPPRMYKSVFESLINYGYRPENI 245
>gi|116753830|ref|YP_842948.1| oxidoreductase FAD/NAD(P)-binding subunit [Methanosaeta thermophila
PT]
gi|116665281|gb|ABK14308.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methanosaeta
thermophila PT]
Length = 265
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 17/231 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +I + +S+ I D D++ ++ R GQ++ + + +G+ ++IAS P+
Sbjct: 11 IVDIDRVTHDSYLISLQILDR-DVSFTY-RPGQFVMVSLFGMGECP-ISIASSPT----R 63
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
+ ++ AG + GDV+ I +G GF +D++ + +++I GSG
Sbjct: 64 NVLQLCIRR-AGRITNGIMDSMIGDVLGIRGPLGNGFPIDKM-----HKSIVIAGGGSGF 117
Query: 181 SPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWS 239
+ +RSLI + E +V + YGAR + + + ++K W+ G++I + D +W
Sbjct: 118 ATLRSLINYIVDRRDEFEEVFVAYGARTRQDLYFMQEYKSWKMEGIEIELTVDVGDESWR 177
Query: 240 GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G G V R +P + + CG M V + +L G IL
Sbjct: 178 GNVGMVPELLDRMD--ISPPASAAI-CGPLPMIRAVANRLLENGFRGSDIL 225
>gi|407786992|ref|ZP_11134135.1| oxidoreductase FAD/NAD(P)-binding subunit [Celeribacter
baekdonensis B30]
gi|407200400|gb|EKE70408.1| oxidoreductase FAD/NAD(P)-binding subunit [Celeribacter
baekdonensis B30]
Length = 352
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 91 AGQYLQLRV-VDVGKPTF--LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V + G+ ++A+PPS A G F++K G + L G+K G
Sbjct: 137 AGQYVDITVKTEKGEKITRSFSMANPPSEAQKLG---FIIKKYPDGRFSNELDDGGIKAG 193
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
VEI G F + P V++ GSG+SP+ S++ S E + +YG
Sbjct: 194 AEVEIEGPYGMCFRREGRDGP-----VILVGAGSGMSPVWSILNDQVVSGEERSIYFFYG 248
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQG 260
AR+ + D+ K + V+ +PVLS D W+GE G+V K + G
Sbjct: 249 ARSQSDLFKLDEIKALTDAHPNVEFIPVLSHEADDSGWAGERGFVHECVDARLKEIDCDG 308
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G V CG M + +T ++ +++I +
Sbjct: 309 EGDVYACGPPPMIDALTPVLFMRNFETDRIFYD 341
>gi|32967109|gb|AAP92394.1| LapP [Pseudomonas alkylphenolia]
Length = 352
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 83 DIASSHTRAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLC 139
D A H +AGQY+ L++ D +G F ++AS P+ S E ++ V G TA V
Sbjct: 127 DGAGMHFQAGQYINLQLPDGIGSRAF-SVASAPADGSE---IELNIRIVPGGRGTAYVHE 182
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDV 199
L+ G+ V I+ GR F + P V+ GSG+S RS+I + +
Sbjct: 183 QLRVGERVSITGPYGRFFVRKSARTP-----VIFMGGGSGLSSPRSMILDLLAEGCELPI 237
Query: 200 RLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKI 255
L YG RN + Y D+F + + VP LS D +W G G+V A AK
Sbjct: 238 TLIYGQRNRDELYYHDEFLAMARQHANFSYVPALSHEPEDSDWQGFRGFVHDA---AKAH 294
Query: 256 FNP--QGTGVVLCGQKQMAEEVTSIVL 280
F+ +G LCG M + S ++
Sbjct: 295 FDNDFRGHKAYLCGPPLMIDSCISTLM 321
>gi|421497535|ref|ZP_15944699.1| NADH-flavin reductase [Aeromonas media WS]
gi|407183479|gb|EKE57372.1| NADH-flavin reductase [Aeromonas media WS]
Length = 232
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 63 EISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA 122
E+ ++++HV++ P A S + GQYL + + D K F +IA+ P+ SG
Sbjct: 10 ELREYVDTIWHVAL----TPQQAVSF-KPGQYLLVVMSDSDKRPF-SIANSPT---RSGV 60
Query: 123 FEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
E + + +VL +++ +EI G+ F D P +++ A G+G
Sbjct: 61 LELQIGATPENAYAGQVLARMREQGEIEIELAAGKAFLRDESPRP-----LILMAGGTGF 115
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDGNW 238
S R+++E + + V LY+G R + Q + ++WE + +PV+ +P+ +W
Sbjct: 116 SYARAILEYLIDTGSKRPVFLYWGVRQAHWLYEQGQMQQWERDYAPLTFIPVVQEPEADW 175
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+G+TG V A + + + G+ +MA G E+I +
Sbjct: 176 TGKTGLVHKAI--MDDFVSLHDYDIYVAGRFEMAGAAREEFKVLGAEPERIFGD 227
>gi|375095264|ref|ZP_09741529.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Saccharomonospora marina XMU15]
gi|374655997|gb|EHR50830.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Saccharomonospora marina XMU15]
Length = 354
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKK--GDVVEI 149
GQY+ + D + ++A+ S S G EF++K K GD + +
Sbjct: 141 GQYVDFEIPDTDRTRSFSMANTSSLES--GRLEFVIKIYTDGLFSNFLDTKVSIGDRLRV 198
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+ G F + D ++ G+G++PI SL+ S YYGAR +
Sbjct: 199 TGPFG-AFTLRDAAGKD----LVFVGGGAGMAPILSLLRSMAERGSDRTATFYYGARRRR 253
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D+ +E E + G + +P LS+PD + W GE G + +R + + G +
Sbjct: 254 DLCFTDELRELERTLPGFRYIPALSEPDDSDEWDGEVGLITDVVARNET--DLSGADAYV 311
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M E ++ + GV+++++ +
Sbjct: 312 CGPPPMVEAAVELLPSLGVAADRVFYD 338
>gi|333978919|ref|YP_004516864.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain-containing protein
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333822400|gb|AEG15063.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 279
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 19/243 (7%)
Query: 56 WTPTPLAEISPAAES---LFHV-SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
+ P P+ + E+ L H +++ + D S GQ+ ++ V VG+ F IA
Sbjct: 5 YLPLPMRLVKNFVETEDKLIHTFTLEFLNEEDEKSFQYLPGQFAEVSVFGVGEAPF-GIA 63
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P+ G +F V V G L L +G ++ + +G + ++ + + +
Sbjct: 64 SSPT---EPGHLKFSVAKV-GVVTTTLHQLPEGTILGVRGPLGNNYPIEEFKGKN----L 115
Query: 172 LIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWES-SGVKI 227
++ G + +RSLI R D + + YGARN + Y+D+ EWE S + +
Sbjct: 116 VVIGGGFAFTTLRSLITYILHPDHRGDYGELTVIYGARNPGLLLYKDELAEWEKRSDINL 175
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+ + +P W+G G+V A + + V+CG M + ++ G S E
Sbjct: 176 ICTIDRPVEGWNGRVGFVPAVTKEVAP--SAENAYAVICGPPVMIKFTMPVLEELGFSPE 233
Query: 288 KIL 290
+I+
Sbjct: 234 RII 236
>gi|407974949|ref|ZP_11155856.1| Na(+)-translocating NADH-quinone reductase subunit F
[Nitratireductor indicus C115]
gi|407429516|gb|EKF42193.1| Na(+)-translocating NADH-quinone reductase subunit F
[Nitratireductor indicus C115]
Length = 406
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + L GL++GD +E++ G A D + ++ G G++P+R++I
Sbjct: 241 GIVSSWLFGLREGDPIEVAGPYGHFGAQDTGR------EMVFIGGGVGMAPLRAIITDML 294
Query: 192 SSK-ERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQ 246
+ R + +YGAR+ + Y D+F E + VP LS+P N W GE G+V
Sbjct: 295 ERQGSRRKISFWYGARSRGELFYADEFDELARRHENFRWVPALSEPARNDPWDGELGFVH 354
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
RA K P+ LCG M E + +++ GV SE I +
Sbjct: 355 DVVFRAYLKDHPAPEDCEYYLCGPPLMIEAIYAMLDECGVESESIFND 402
>gi|149375516|ref|ZP_01893286.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Marinobacter algicola DG893]
gi|149360221|gb|EDM48675.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Marinobacter algicola DG893]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 30 PLLHLKPQRRRLATLAAAA-VRQDTTVWTP---TPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R LA A V D T+ P E P + VS + +P I
Sbjct: 61 PFALMDVERDEGKVLACCATVESDVTIEADIDVDPDFEGYPVEDYTATVSDIVELSPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV 137
H + AGQY+ + V V P ++A+ PS + E V+ V G A
Sbjct: 121 GIHLKLDRPMTFQAGQYINIDVPGVDGPRAFSLANQPS---KTDEVELHVRMVEGGAATT 177
Query: 138 LCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
LK GD + +S G+ F V QP D ++ A GSG+S +S+I +
Sbjct: 178 YIHEQLKAGDELHLSGPYGQ-FFVRSSQPGD----LIFIAGGSGLSSPQSMILDLLEQND 232
Query: 196 RSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSR 251
V L+ GARN+ + ++ F+ + + VP LSQ D W G GYV A
Sbjct: 233 ERRVVLFQGARNVAELYNRELFEGLDRDHDNFTYVPALSQAEDDDGWQGFRGYVHEA--- 289
Query: 252 AKKIFNPQ--GTGVVLCGQKQMAE-EVTSIVLAEGVSSEKILKNF 293
AK F+ + G LCG M + +TS++ + ++ F
Sbjct: 290 AKAHFDGRFAGNKAYLCGPPPMIDAAITSLMQGRLFERDIFMEKF 334
>gi|170697677|ref|ZP_02888765.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria IOP40-10]
gi|170137425|gb|EDT05665.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria IOP40-10]
Length = 343
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDLYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|300312623|ref|YP_003776715.1| chaperone activity ATPase [Herbaspirillum seropedicae SmR1]
gi|124483448|emb|CAM32597.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Herbaspirillum
seropedicae]
gi|300075408|gb|ADJ64807.1| ATPase with chaperone activity, ATP-binding subunit protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P +A++ A+ + +S+ + P +AGQY++ + D GK ++A+ P
Sbjct: 104 PVRVAKLDKVADDVIVLSLQL---PANDRLQYKAGQYVEFLLRD-GKRRSYSMATAPH-- 157
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
++ + G T +V LK+ D++ I +G F + P +++ A
Sbjct: 158 -KDEHMSLHIRHLPGGLFTDQVFTTLKERDILRIEGPLGTFFLREDSDKP-----IILLA 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS- 232
+G+G +PI++++E + + V LY+G R + + ++WE + K VPV+S
Sbjct: 212 SGTGFAPIKAIVEQLEHAGSKRPVTLYWGGRRPQDLYMDALCQQWEQTLPNFKYVPVVSN 271
Query: 233 -QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
Q + NWSG TG+V A + + G V CG
Sbjct: 272 AQAEDNWSGRTGFVHRAV--MEDFPDLSGHQVYACG 305
>gi|399154372|ref|ZP_10754439.1| oxidoreductase FAD/NAD(P)-binding subunit [gamma proteobacterium
SCGC AAA007-O20]
Length = 338
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 28/258 (10%)
Query: 40 RLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRV 99
L LA VR P + EI+ + + + I P S AGQYL L
Sbjct: 90 ELDALANIEVRS-----IPCRVEEINHLNHDVIQIILKI---PGAQSLQYLAGQYLDLEH 141
Query: 100 VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGF 157
D +P +IA+ P S E V+ V T + L + ++ I G F
Sbjct: 142 SDF-EPRAFSIANAPV---NSNLIELHVRLVEDGKFTNYIFNSLAEKTILRIEGPKGGFF 197
Query: 158 AVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKF 217
+ + P +++ A G+G PI+++IE + V LY+G R+ K + Y
Sbjct: 198 LREESEGP-----IIMIAGGTGFGPIKAIIEHLIAINSERVVYLYWGVRDEKDI-YSKLP 251
Query: 218 KEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEV 275
EW +S ++ VPVLS+ G W GE GYV + R + + V CG M +
Sbjct: 252 SEWAEKSPKIQFVPVLSEASGVWQGERGYVHESVMRDFE--DLSDYEVYACGPPVMVKAA 309
Query: 276 TSIVLAEGVSSEKILKNF 293
L +G+S KNF
Sbjct: 310 VKGCLEQGLSK----KNF 323
>gi|372269467|ref|ZP_09505515.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Marinobacterium stanieri
S30]
Length = 252
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 80 DAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEV 137
+A D + H AGQYL L + + GK +IAS P E ++ V GS A +
Sbjct: 29 EASDRQNVHFHAGQYLDLCLPE-GKKASFSIASAPD---QGRDLELHIREVPGSEFNAMI 84
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS-GISPIRSLIESGFSSKER 196
L L+ V++ G+ V+ P+ T +FA S G + I+S++E +++
Sbjct: 85 LNHLRSQSQVDVELPKGKVHLVEAELKPE---TRFVFAAASTGFAQIKSIVEHLLANQVS 141
Query: 197 SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRA 252
+ + +Y+GAR M + ++W E + V+ VPV+S+P+ + W G TG + +
Sbjct: 142 NPIDIYWGARVEADMYLEKLPQQWVSEHANVRFVPVVSEPENSPGWEGLTGLMPNVLADQ 201
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + + V CG M + + +GVS +I
Sbjct: 202 LESVD-EHLAVYACGSPGMVHALVDRLEEKGVSEAQI 237
>gi|163782516|ref|ZP_02177513.1| hypothetical protein HG1285_16570 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882089|gb|EDP75596.1| hypothetical protein HG1285_16570 [Hydrogenivirga sp. 128-5-R1-1]
Length = 269
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
+ G E L LK+GD + I G F V+R + D +++ A G G++ I+ ++E
Sbjct: 69 LVGEVTEDLFLLKEGDCIGIRGPYGTHFPVERYEGWD----IVLVAGGLGLADIKPVVEY 124
Query: 190 GFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAA 248
+ V L GA+N + Y++++K+WE + ++ + +P +WSG G V
Sbjct: 125 LIERRGAYGRVFLLVGAKNPSGLLYKEEYKKWEEGDIGLLLTVDKPTDDWSGHVGVVTEL 184
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
F + NP T ++CG + M T +L G+S I
Sbjct: 185 FKFVE--LNPDRTVGMMCGPEVMMYFTTKKLLELGLSEGNI 223
>gi|115352588|ref|YP_774427.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia ambifaria
AMMD]
gi|115282576|gb|ABI88093.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria AMMD]
Length = 343
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDLYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|14521075|ref|NP_126550.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus abyssi GE5]
gi|5458292|emb|CAB49781.1| hydG-1 cytochrome-c3 hydrogenase, gamma chain [Pyrococcus abyssi
GE5]
gi|380741638|tpe|CCE70272.1| TPA: cytochrome-c3 hydrogenase subunit gamma [Pyrococcus abyssi
GE5]
Length = 292
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P +A + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPKLAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRKGFFELCIRR-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPDWPGLHGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKAVFESLINYGYRPENI 243
>gi|78067291|ref|YP_370060.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. 383]
gi|77968036|gb|ABB09416.1| Ferredoxin/Oxidoreductase [Burkholderia sp. 383]
Length = 343
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDAGDQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|161523985|ref|YP_001578997.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
ATCC 17616]
gi|189351254|ref|YP_001946882.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
ATCC 17616]
gi|160341414|gb|ABX14500.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
multivorans ATCC 17616]
gi|189335276|dbj|BAG44346.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
ATCC 17616]
Length = 343
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|429206419|ref|ZP_19197685.1| Methane monooxygenase component C [Rhodobacter sp. AKP1]
gi|428190460|gb|EKX59006.1| Methane monooxygenase component C [Rhodobacter sp. AKP1]
Length = 365
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 91 AGQYLQLRVVDVGKPTF---LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V T ++A+PPS + G F++K G + L G++ G
Sbjct: 150 AGQYVDITVTTEEGETITRSFSMANPPSETQSLG---FIIKKYPDGKFSNQLDSGGIRLG 206
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V ++ G F + P V++ GSG+SP+ S+++ +S E +V +YG
Sbjct: 207 AEVTVTGPYGMCFRREGRDGP-----VILVGAGSGMSPVWSILQDHLASGEAREVLFFYG 261
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQG 260
AR + + + D+ + V+ +PVLS D W+GE G+V A SR + +G
Sbjct: 262 ARTPEDLFHLDEIGVLTEAHPSVRFIPVLSHASIDCGWTGERGFVHEAVSRILREEGLEG 321
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G V CG M + + ++ SE+I
Sbjct: 322 QGDVYACGPPPMIDALQPVLFMLDFDSERIF 352
>gi|408833311|gb|AFU93051.1| PyrP [Diaphorobacter sp. J5-51]
Length = 321
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 110/256 (42%), Gaps = 24/256 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q DTT+ P AEI P + V P I
Sbjct: 61 PFALMDFERDEGKTLACCATLQCDTTIEADIDEEPDAEIIPVRDFAATVERIERLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H R GQY+QL + +G+ +IA+ P E V+ V G T
Sbjct: 121 ALHLRLDKPIRFQPGQYVQLEIPGLGQSRAFSIANAPGADGECAQVELNVRHVPGGAGTT 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L++G + ++ GR F + P ++ A GSG+S RS+I + +
Sbjct: 181 WLHEQLQEGARLRLAGPYGRFFVRRSARLP-----MVFLAGGSGLSSPRSMIHALLAGGC 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
V L YG R+ + Y D+F+ + VP LS +P+G +WSG G+V A ++
Sbjct: 236 TEPVTLVYGQRSRDELYYDDEFRALAQQHPQFTYVPSLSAEPEGSDWSGARGFVHQA-AQ 294
Query: 252 AKKIFNPQGTGVVLCG 267
A N G LCG
Sbjct: 295 AHFQGNFAGHKAYLCG 310
>gi|389852319|ref|YP_006354553.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus sp. ST04]
gi|388249625|gb|AFK22478.1| cytochrome-c3 hydrogenase subunit gamma [Pyrococcus sp. ST04]
Length = 292
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P +A + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPKLAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRRGFFELCIRR-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HKLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPDWPGLHGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKKTAVAICGPPRMYKAVFEALINYGYRPENI 243
>gi|171316753|ref|ZP_02905965.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria MEX-5]
gi|171098103|gb|EDT42918.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
ambifaria MEX-5]
Length = 343
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGHQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|221211502|ref|ZP_03584481.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD1]
gi|221168863|gb|EEE01331.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD1]
Length = 343
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|255292473|dbj|BAH89589.1| FAD/NAD(P)-binding oxidoreductase [uncultured bacterium]
Length = 353
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
T + ++SP + + H+ +D +AGQY+ L + V +IA+ PS
Sbjct: 108 TVAEIIDLSPTIKGI-HLELD-------GDMDFQAGQYINLNIPGVEGVRAFSIANQPSI 159
Query: 117 ASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
+ LV AG T+ + LK GDV+++S G+ F V + P D ++ A
Sbjct: 160 KNRIELHVRLVPDGAG-TSFLHRQLKVGDVLDLSGPYGQ-FFVRKSAPED----LIFIAG 213
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP 234
GSG+S +S+I + +R + L+ GARN+ + ++ F+ E VP L++P
Sbjct: 214 GSGLSSPQSMILDLLEAGDRRHITLFQGARNVAELYNRELFERLAAEHDNFDYVPALNEP 273
Query: 235 --DGNWSGETGYV-QAAFSRAKKIFNPQGTGVVLCG 267
D +W G TG+V +AA + F G LCG
Sbjct: 274 EADDHWEGFTGFVHEAAVAHFDGKFG--GHKAYLCG 307
>gi|395007575|ref|ZP_10391297.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Acidovorax sp.
CF316]
gi|394314415|gb|EJE51335.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Acidovorax sp.
CF316]
Length = 351
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV-LCG-LKKGDVV 147
+AGQY+ L+V V +IAS P A E V+ V G A L G +K GD +
Sbjct: 133 QAGQYVMLQVPGVLGARAFSIASAPGDA----LIELHVRKVEGGPATTWLHGQVKVGDRL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+S GR F + A GSG+S +S++ + + L++GARN
Sbjct: 189 ELSGPFGRFFVRKSAMR-----QAIFLAGGSGLSSPKSMVLDLLAEGTGYPITLFHGARN 243
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS-QPDGNWSGETGYVQAAFSRAKKIFNP-QGTGV 263
+ + + D FK E + VPVLS D W+G TGYV A + + N +G+
Sbjct: 244 RQELYFADLFKALATEHPNFRYVPVLSANDDAAWTGATGYVHQALQ--QHLGNDFRGSKA 301
Query: 264 VLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 302 YLCGPPPMIEGCIATLM 318
>gi|389878097|ref|YP_006371662.1| oxidoreductase FAD-binding subunit [Tistrella mobilis KA081020-065]
gi|388528881|gb|AFK54078.1| oxidoreductase FAD-binding subunit [Tistrella mobilis KA081020-065]
Length = 344
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA- 122
I A + V + + D +A + AGQY RV G PT S A+ G
Sbjct: 111 IEDATHDIKRVRLAVEDGAPLAFT---AGQYA--RVTFPGAPT-----RDYSMANWPGEP 160
Query: 123 -FEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
EF ++ V G +TA + LK GD V + G + ++ P +L A GSG
Sbjct: 161 ELEFHIRRVPGGAATARIHALLKLGDPVTVEGPFGSSYLREKHAGP-----ILCVAGGSG 215
Query: 180 ISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PD 235
++PI+S++E+ + R + +Y+GAR + + D F+ E+ + PVLS+ P
Sbjct: 216 LAPIKSIVETALAHGMRQPIHVYFGARAERDLYLADHFEGLEARHPNLTFTPVLSESPPQ 275
Query: 236 GNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W TG+V A + + + G + G M + +I A G+ E +
Sbjct: 276 PKW--RTGFVTDAV--GQDLHDLDGWKAYVAGPPAMVDAAMAIATARGLRREDL 325
>gi|221199283|ref|ZP_03572327.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD2M]
gi|221205815|ref|ZP_03578830.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD2]
gi|421470938|ref|ZP_15919273.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
ATCC BAA-247]
gi|221174653|gb|EEE07085.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD2]
gi|221180568|gb|EEE12971.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Burkholderia multivorans CGD2M]
gi|400226572|gb|EJO56638.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
ATCC BAA-247]
Length = 343
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHTGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|343925976|ref|ZP_08765491.1| putative phenol hydroxylase reductase component [Gordonia
alkanivorans NBRC 16433]
gi|343764327|dbj|GAA12417.1| putative phenol hydroxylase reductase component [Gordonia
alkanivorans NBRC 16433]
Length = 341
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++L V + G+ ++A+PPS G EF ++ G A + L GD V
Sbjct: 135 AGQYVELAVPETGETRPYSMANPPS---EPGKLEFHIRRQPGGLATEGWIFESLDVGDPV 191
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
++ G D P+E L+ A G+G++P++++ + ++ +Y+G R
Sbjct: 192 TMTGPWG-----DFCHEPEERDVGLVLLAGGTGLAPLKAIARAALEDDPEREIHVYHGVR 246
Query: 207 NLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ Y F E S+ GV+ +P LS+ WSG TGYV A + + + +
Sbjct: 247 TRAEL-YDVDFWEGLSATHPGVRYIPCLSRE--QWSGRTGYVGDAM--MEDLPSCRNHAA 301
Query: 264 VLCGQKQMAE 273
LCG M E
Sbjct: 302 YLCGPPAMVE 311
>gi|296446380|ref|ZP_06888325.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylosinus
trichosporium OB3b]
gi|296256153|gb|EFH03235.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylosinus
trichosporium OB3b]
Length = 273
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 24/240 (10%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYL-------QLRVVDVGKPTFLAIASP 113
+A+ P + HV + D+A+ AG++ L V VG+ ++++
Sbjct: 1 MADHDPMIPRVAHVRRKQRELVDVATLEIDAGEFFFAPGQFNMLTVFGVGEAA-ISVSGD 59
Query: 114 PSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
P+ S LV ++ G+ + L L G+ + + GRG+ +D + D V
Sbjct: 60 PADPSR------LVHTIRAVGAVSRALTELSVGEPIGLRGPFGRGWPMDEARGRD----V 109
Query: 172 LIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESS-GVKIVP 229
++ A G G++P+R + F+ +E V L YGAR+ + + ++D+ ++W ++
Sbjct: 110 IVVAGGLGLAPLRPALYRLFAERENYGRVILLYGARSPQDILFRDELEQWRGRLDAEVEA 169
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ G+W G G V +RA +F+ +LCG + M V + GV+ E+I
Sbjct: 170 TVDHARGDWRGNVGVVTKLIARA--VFDAPNALAMLCGPEIMMRFVADALGDRGVAPERI 227
>gi|390960317|ref|YP_006424151.1| cytosolic NiFe-hydrogenase subunit gamma [Thermococcus sp. CL1]
gi|390518625|gb|AFL94357.1| cytosolic NiFe-hydrogenase subunit gamma [Thermococcus sp. CL1]
Length = 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
PL E E LF + P+IA T + GQ++QL + VG+ +S A
Sbjct: 29 PLTE----TEKLFLFRFE---DPEIAERWTFKPGQFVQLTIPGVGEVPISICSS----AM 77
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G FE ++ AG V+ L+ GD V + G GF VD + D +L+ A G
Sbjct: 78 RKGFFELCIRK-AGRVTTVVHRLQPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGL 132
Query: 179 GISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQ 233
G +P+RS+ ++ + ++ AR K + + + + E+ VKI+ +++
Sbjct: 133 GTAPLRSVFLYAMDNRWKYGNITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR 192
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
D +W G G Q A NP+ T V +CG +M + V ++ G E I
Sbjct: 193 -DPDWPGRHGRPQKFIVEANT--NPKKTAVAICGPPRMYKSVFEALINYGYRPENI 245
>gi|373456628|ref|ZP_09548395.1| oxidoreductase FAD/NAD(P)-binding domain protein [Caldithrix abyssi
DSM 13497]
gi|371718292|gb|EHO40063.1| oxidoreductase FAD/NAD(P)-binding domain protein [Caldithrix abyssi
DSM 13497]
Length = 279
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 62 AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASG 121
E A E FH+ + P+ + + GQ++Q+ + G+ ++I+S P+
Sbjct: 22 VETLTATEKRFHILL-----PNGEELNHKPGQFVQVSIFGFGEAP-ISISSSPT---RKP 72
Query: 122 AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
FE V+ G E + L+ G + I G GF +++ + D VL A G G++
Sbjct: 73 GFELTVRR-TGRLTEKMHALQPGSQIGIRGPFGNGFDIEKFKDKD----VLFVAGGIGLA 127
Query: 182 PIRSLIESGFSSKERSD-VRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWS 239
P++SLIE +++ + V + YG RN + Y ++ EW++ V+ + + D W
Sbjct: 128 PLKSLIEYTLDERDQFNRVIILYGTRNPSEILYPEEIAEWQAREDVEFYMTVDRADETWK 187
Query: 240 GETGYV 245
G G +
Sbjct: 188 GNVGVI 193
>gi|409407131|ref|ZP_11255582.1| chaperone activity ATPase [Herbaspirillum sp. GW103]
gi|386432882|gb|EIJ45708.1| chaperone activity ATPase [Herbaspirillum sp. GW103]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P +A++ A+ + +S+ + P +AGQY++ + D GK ++A+ P
Sbjct: 104 PVRVAKLEKVADDVIILSLQL---PANDRLQYKAGQYVEFLLRD-GKRRSYSMANAPH-- 157
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
++ + G T +V LK+ D++ I +G F + P +++ A
Sbjct: 158 -KDEHMSLHIRHLPGGLFTDQVFTTLKERDILRIEGPLGTFFLREDSDKP-----IILLA 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS- 232
+G+G +PI++++E + + V LY+G R + + ++WE K VPV+S
Sbjct: 212 SGTGFAPIKAIVEQLEHAGSKRPVTLYWGGRRPQDLYMNALCQQWEQELPNFKYVPVVSN 271
Query: 233 -QPDGNWSGETGYVQAA 248
Q + NWSG TG+V A
Sbjct: 272 AQAEDNWSGRTGFVHRA 288
>gi|119899785|ref|YP_934998.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Azoarcus sp. BH72]
gi|119672198|emb|CAL96112.1| probable CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehy drase
reductase [Azoarcus sp. BH72]
Length = 339
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + + D + +F +IA+ P A E V+ + G T +V +K D++
Sbjct: 133 RAGQYIDILLADGQRRSF-SIANAPEGADH---VELHVRRIDGGRFTGQVFETMKVRDIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+G + ++ D P V++ G+G +P++ +IE ++ + + LY+GARN
Sbjct: 189 RFEGPLGTFW----LREDDARPIVMV-GGGTGFAPLKGIIEHCIAAGIQRPITLYWGARN 243
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + + W G + +PVLS+ + WSG +G V AA + + G V
Sbjct: 244 RAGLYMDELARGWTQQLPGFRYIPVLSEATAEDAWSGRSGLVHAAV--LEDFADLSGHAV 301
Query: 264 VLCGQKQMAEEVTSIVLAE 282
CG M E + AE
Sbjct: 302 YACGAPAMIEAARTSFTAE 320
>gi|344170245|emb|CCA82644.1| putative Ferredoxin--NAD(+) reductase [blood disease bacterium
R229]
Length = 349
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPLELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IVLLASGTGFAPIKAIIEHAAFIGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + +EW + G + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPRDLYMHALAEEWARTLPGFRYVPVISDAQPEDGWTGRTGFVHQA 294
>gi|421475247|ref|ZP_15923218.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
CF2]
gi|400230583|gb|EJO60351.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia multivorans
CF2]
Length = 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPVELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHAGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
K + + ++W E K VPVLS+PD W+G TG+V A + + + G V
Sbjct: 245 KDIYLGELAEQWAREIPNFKYVPVLSEPDEADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|400755228|ref|YP_006563596.1| NADH oxidoreductase [Phaeobacter gallaeciensis 2.10]
gi|398654381|gb|AFO88351.1| putative NADH oxidoreductase [Phaeobacter gallaeciensis 2.10]
Length = 387
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 90 RAGQYLQLRVVDVGKPTF--LAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGD 145
+AGQY+ L V G T AI+SP + ++ V+ V G + ++ GL +G
Sbjct: 80 QAGQYVNLFVTVNGTHTARPFAISSPSQIRTH---YDITVREVPGGFVSPYLVRGLTEGQ 136
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+++ S MG + D ++ A GSG++P S+I + SS L YG+
Sbjct: 137 LLQSSGPMGTFYHNPLFHGDD----LVFLAGGSGVAPAMSMIHNFLSSARPPRFHLIYGS 192
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
RN + ++++ + + + V+S+PD ++SG +G++ A AK + +G
Sbjct: 193 RNTGDVIFREQLHQLADRHETLTVDEVISEPDADYSGHSGFLNADLI-AKLVGPLEGKSF 251
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M + + GVS K+
Sbjct: 252 YLCGPNAMYDFCQPELTKLGVSERKV 277
>gi|315230302|ref|YP_004070738.1| sulfhydrogenase II subunit g [Thermococcus barophilus MP]
gi|315183330|gb|ADT83515.1| sulfhydrogenase II subunit g [Thermococcus barophilus MP]
Length = 291
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P+IA + T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 39 EDPEIAETWTFKPGQFVQLTIPGVGEVPISICSSP----MRKGFFELCIRK-AGRVTTVV 93
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
L+ GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 94 HRLQPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 149
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + ES VKI+ +++ D W G G Q A
Sbjct: 150 NITFINTARYGKDLLFYKELEAMKDLAESENVKIIQSVTR-DPEWPGLKGRPQNFIVEAN 208
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
NP+ T V +CG +M + V ++ G E I
Sbjct: 209 T--NPKKTAVAICGPPRMYKAVFESLINYGYRPENIF 243
>gi|339327078|ref|YP_004686771.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD
[Cupriavidus necator N-1]
gi|338167235|gb|AEI78290.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD
[Cupriavidus necator N-1]
Length = 354
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EDGPIELHIRHMPGGAFTDYVFGAKEGQPVMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + + P +++ A+G+G +PI++++E + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESEAP-----IILLASGTGFAPIKAIVEHAAYTGIERPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R K + ++W E + VPV+S PD NW G TG+V A
Sbjct: 245 WGGRRPKDLYMHALCEQWARELPNFQYVPVVSDALPDDNWQGRTGFVHQA 294
>gi|254168305|ref|ZP_04875151.1| Oxidoreductase NAD-binding domain protein [Aciduliprofundum boonei
T469]
gi|197622814|gb|EDY35383.1| Oxidoreductase NAD-binding domain protein [Aciduliprofundum boonei
T469]
Length = 270
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASG-AFEFLVKSVAGSTAEVLCGLKKGDVVE 148
+ GQ+++L V G+ +P S + A E +++V T ++ +K+GD V
Sbjct: 33 KPGQFVELSVFGYGE-------APISISGGDDEAIELSIRAVGNVTKKIH-RMKEGDYVG 84
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
I G G+ +++ E +LI A G G++P++ ++E +ER D L YGAR
Sbjct: 85 IRGPFGNGWPIEKA----EGKNILIIAGGIGLAPLKPVVEYVCKHRERFKDATLLYGARR 140
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
M ++ KF+EW + I+ + + + W G G V + + + + T +CG
Sbjct: 141 PSLMLFKYKFEEWRKY-MDILLTVDEAEPGWEGHVGVVTTLCDKIRHVAD---TITYMCG 196
Query: 268 QKQMAEEVTSIVLAE 282
M + TS+VL E
Sbjct: 197 PPIMM-KYTSMVLIE 210
>gi|295677421|ref|YP_003605945.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Burkholderia sp. CCGE1002]
gi|295437264|gb|ADG16434.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
CCGE1002]
Length = 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---VEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFF----LREDSDKPIVLL-ASGTGFAPLKAIVEHAVFKNLTRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDAGDAWTGRIGFVHRA 288
>gi|300690701|ref|YP_003751696.1| ferredoxin--NAD(+) reductase [Ralstonia solanacearum PSI07]
gi|299077761|emb|CBJ50399.1| putative Ferredoxin--NAD(+) reductase [Ralstonia solanacearum
PSI07]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPLELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IVLLASGTGFAPIKAIIEHASFIGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + +EW + G + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPRDLYMHALAEEWARTLPGFRYVPVISDAQPEDGWTGRTGFVHQA 294
>gi|414171888|ref|ZP_11426799.1| hypothetical protein HMPREF9695_00445 [Afipia broomeae ATCC 49717]
gi|410893563|gb|EKS41353.1| hypothetical protein HMPREF9695_00445 [Afipia broomeae ATCC 49717]
Length = 340
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 81 APDIASSHTR----------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV 130
AP++A H R AGQYL++ + D G ++A+ P S E ++ V
Sbjct: 109 APNVAVIHLRLPIGRRAIFRAGQYLRVLMAD-GDSRNYSMANAPQ---KSDELELHIRYV 164
Query: 131 AGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G + ++L L K ++I G F+++ + P +LI ATG+G +PI+S+IE
Sbjct: 165 PGGKFSEDILTRLDKTSTLDIELPYGE-FSLNE---ESDCPAILI-ATGTGFAPIKSIIE 219
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGV--KIVPVLSQPDGNWSGETGYVQ 246
S + LY+GA + D + W + PV+S P W G TG V
Sbjct: 220 SNIRQGSTRPLHLYWGANTEADLYLLDLARSWAETHAWFSFTPVVSNPSTQWGGRTGPVH 279
Query: 247 AAFSRAKKIFNPQGTG--VVLCGQKQMAE 273
RA + +P +G V CG M E
Sbjct: 280 ----RAVQTDHPDMSGLEVYACGAPIMIE 304
>gi|406898548|gb|EKD42101.1| hypothetical protein ACD_73C00330G0002 [uncultured bacterium]
Length = 262
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 109 AIASPPSFASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+IASPP EF++ V+ G+ L LK GD + + + GF ++ + PD+
Sbjct: 71 SIASPPF---EKDFMEFIITLVSEGTLTPRLWNLKAGDPLFLGPKITGGFIMNEV--PDD 125
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWE--SSGV 225
V I ATG+GI+P S+I++ S+K + + +++G R + + Y+ + +
Sbjct: 126 KNIVFI-ATGTGIAPYTSMIKTFLSAKMKRHLSVFHGVRTSQDLVYRSELTALAHINEFF 184
Query: 226 KIVPVLSQPDGN---WSGETGYVQAAFSRA------KKIFNPQGTGVVLCGQKQMAEEVT 276
P++S+P + W E+G+VQ + K P+ T V LCG M + +
Sbjct: 185 HYFPIISRPKEDPIPWKKESGHVQKLWETKVLETAWKTKPTPENTHVFLCGSPGMIDSMI 244
Query: 277 SIVLAEGVSSE 287
++ +G +
Sbjct: 245 ELLGKDGFKEQ 255
>gi|307730742|ref|YP_003907966.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Burkholderia sp. CCGE1003]
gi|307585277|gb|ADN58675.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
CCGE1003]
Length = 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFFLREESDKP-----IVLLASGTGFAPLKAIVEHAVFKNLDRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAA 248
K + + ++W E K VPVLS+PD W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDPSDAWTGRVGFVHRA 288
>gi|406884748|gb|EKD32096.1| hypothetical protein ACD_77C00177G0001 [uncultured bacterium]
Length = 416
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IA+PP + A G F + G + + K GD V IS G F I+ D
Sbjct: 231 IRIATPP-WDRAKGTF---MPVNPGVCSSYIFSRKPGDKVTISGPYGEFF----IKETDN 282
Query: 168 YPTVLIFATGSGISPIRSLIESGF-SSKERSDVRLYYGARNLKRMAYQDKF----KEWES 222
++ G+G++P+RS I F + K + V +YGAR+L+ + Y ++F KE+ +
Sbjct: 283 --EIVFVGGGAGMAPMRSHIFHLFHTEKTKRKVSFWYGARSLREVFYAEQFRAIEKEFPN 340
Query: 223 SGVKIVPVLSQPDGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
I ++P+ NW+G TG++ A + K P+ LCG M VT+++
Sbjct: 341 FTFNIALSEAKPEDNWTGMTGFIHQALLDNYLSKHDTPEDIEYYLCGPPMMNSAVTNMLD 400
Query: 281 AEGVSSEKI 289
GV E +
Sbjct: 401 NLGVPEENV 409
>gi|33240573|ref|NP_875515.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238101|gb|AAQ00168.1| Ferredoxin-NADP oxidoreductase, PetH [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 364
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 25/183 (13%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E +++ G + LC +K GD V+I+ +G+ + + P DE +++ ATG+GI+P
Sbjct: 168 YEKEGQTIDGVCSTYLCDIKPGDKVKITGPVGK----EMLLPDDEDANIIMLATGTGIAP 223
Query: 183 IRSLIESGFSSKERSDVRLYY--------GARNLKRMAYQDKFKEWES---SGVKIVPVL 231
+R+ + F ER Y+ GA + Y D F+ +++ ++ +
Sbjct: 224 MRAYLRKMFEKTEREKNNWYFKGKAWLFMGAPKTANLLYDDDFENYKAQYPENLRYTKAI 283
Query: 232 SQPDGNWSGETGYVQA-AFSRAKKIF----NPQGTGVVLCGQKQMA----EEVTSIVLAE 282
S+ N G Y+Q A +IF NP+ T + LCG K M E +T+ A+
Sbjct: 284 SREQKNTKGGRMYIQDRVLEYADEIFSLIENPK-THIYLCGLKGMEPGIDEAMTTAASAK 342
Query: 283 GVS 285
G++
Sbjct: 343 GLN 345
>gi|443468763|ref|ZP_21058970.1| Phenol hydroxylase, FAD- and 2Fe-2S-containing reductase component
DmpP [Pseudomonas pseudoalcaligenes KF707]
gi|442897982|gb|ELS24799.1| Phenol hydroxylase, FAD- and 2Fe-2S-containing reductase component
DmpP [Pseudomonas pseudoalcaligenes KF707]
Length = 353
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 33/235 (14%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
T T L ++SP + L H+ +D A +AGQY+ L++ + ++A+PPS
Sbjct: 108 TVTRLVDLSPTIKGL-HLKLDRPMA-------FQAGQYINLQLPGIEGTRAFSLANPPSR 159
Query: 117 ASASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
A E V+ V G +T + LK GD +E+S G+ F V QP D ++
Sbjct: 160 AD---EVELHVRRVEGGLATGHIHDQLKVGDALELSGPYGQ-FFVRTSQPGD----LVFV 211
Query: 175 ATGSGISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEW-ESSG-VKIVP 229
A GSG+S +S+I ER D R L+ GAR + ++ F+ E+ G VP
Sbjct: 212 AGGSGLSSPQSMI---LDLLERGDTRHMTLFQGARTRAELYNRELFEGLAETHGNFTYVP 268
Query: 230 VLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
LSQ D W+G GYV A AK+ F+ + G LCG M + + ++
Sbjct: 269 SLSQAAEDSEWTGFRGYVHDA---AKQHFDNRFAGHKAYLCGPPPMIDAAVTALM 320
>gi|323527105|ref|YP_004229258.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Burkholderia sp. CCGE1001]
gi|407714511|ref|YP_006835076.1| CDP-4-dehydro-6-deoxyglucose reductase [Burkholderia phenoliruptrix
BR3459a]
gi|323384107|gb|ADX56198.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp.
CCGE1001]
gi|407236695|gb|AFT86894.1| CDP-4-dehydro-6-deoxyglucose reductase [Burkholderia phenoliruptrix
BR3459a]
Length = 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ +G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFFLREESDKP-----IVLLGSGTGFAPLKAIVEHAVFKNLNRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K VPVLS+PD + W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFVPVLSEPDASDAWTGRVGFVHRA 288
>gi|167945513|ref|ZP_02532587.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 284
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL + D K F +IA+ P E ++ +AG T + +++ ++
Sbjct: 110 AGQYLNFILEDGSKRAF-SIANAPH---DDKFIELHIRHIAGGKFTDFLFNDMQEKTILR 165
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATG-SGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G F + + P +IFA G +G +P++ +IE F + + LY+G RN
Sbjct: 166 LEAPLGSYFLREESERP------IIFAGGGTGFAPLKGIIEHAFEIGVKRKMVLYWGVRN 219
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFS 250
+ + K+W + VPVLS+PD W G+TG+V A +
Sbjct: 220 KADLYLPELPKQWATDHDNFSYVPVLSEPDEGWQGQTGWVHEAVT 264
>gi|442610623|ref|ZP_21025334.1| NAD(P)H-flavin reductase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747840|emb|CCQ11396.1| NAD(P)H-flavin reductase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 237
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ EI P E ++HV++ P+ + AGQYLQL + + K F +IAS PS ++
Sbjct: 8 VTEIKPLTEFVYHVTLK----PE-QPAQFLAGQYLQLVLGEKDKRAF-SIASKPSLQNS- 60
Query: 121 GAFEFLVKSVAGST--AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E + + A + + L +K+ S ++ G +Q P VL+ A G+
Sbjct: 61 --LELHIGAGAADSYAMQALEHIKQAHANNQSVLLEVGLGSAHLQQSSPMPIVLL-AGGT 117
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKI--VPVLSQPDG 236
G S ++S+ E S V LY+G + + + + + W K +PV+ P+G
Sbjct: 118 GFSYVKSIAEQLEESGFDQPVLLYWGVKVESALYAKAEMEAWAKRNAKFQFIPVIETPEG 177
Query: 237 NWSGETGYVQAA 248
+WSG TG+V A
Sbjct: 178 DWSGHTGFVHKA 189
>gi|94310268|ref|YP_583478.1| phenol 2-monooxygenase P5 protein [Cupriavidus metallidurans CH34]
gi|93354120|gb|ABF08209.1| Phenol hydroxylase P5 protein (Phenol 2-monooxygenase P5 component)
(protein belongs to CMGI-2) [Cupriavidus metallidurans
CH34]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 37 QRRRLATLAAAAVRQDTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIASS------ 87
+ R A A + DTT+ P AE+ P + V+ P I +
Sbjct: 69 REERKALACCATLLDDTTIEADIEEDPDAEVIPVEDFNAEVTRIEQLTPTIKAVFLRLDQ 128
Query: 88 --HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKK 143
H +AGQY+QL + ++ + +IA+ P+ +A+G E ++ V G T + L
Sbjct: 129 PIHFQAGQYVQLEIPELRQTRAFSIANSPADVAATGEIELNIRRVPGGQGTGYIHEQLAV 188
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
G+++ ++ GR F P ++ A GSG+S RS+I S + L Y
Sbjct: 189 GNILHVTGPYGRFFVRRSADQP-----MVFMAGGSGLSSPRSMILDLLQSGWSKPITLVY 243
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSR--AKKIF--N 257
G RN + Y D+F+E S VP LS+ G T + F AK F N
Sbjct: 244 GQRNEAELYYDDEFRELSQRYSNFSYVPALSE---KAEGATHPLAQGFVHEVAKAHFQNN 300
Query: 258 PQGTGVVLCGQKQMAEEVTSIVL 280
G LCG M + + ++
Sbjct: 301 FSGHQAYLCGPPAMIDACVTTLI 323
>gi|430806277|ref|ZP_19433392.1| phenol 2-monooxygenase P5 protein [Cupriavidus sp. HMR-1]
gi|429501488|gb|EKZ99822.1| phenol 2-monooxygenase P5 protein [Cupriavidus sp. HMR-1]
Length = 356
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEI 149
GQY+ + + P +IAS PS +G E ++ V G +A L G+ +++
Sbjct: 140 GQYVNVWIGKEATPRAFSIASAPS----AGEIELNIRLVPGGSATTYVHEQLAVGERLQL 195
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S +GR F ++ D P V + A GSG+S RS+I S ++ + L +GAR
Sbjct: 196 SGPLGRFF----VRKSDPRPLVFM-AGGSGLSSPRSMILDLLESGDQRQIVLVHGARTAD 250
Query: 210 RMAYQDKFKEWES--SGVKIVPVLS-QPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ Y+D F+ + VPVLS + G+ W+GE GYV A + + ++ +G L
Sbjct: 251 ELYYRDAFEALATRHDNFTYVPVLSAEAQGSAWAGERGYVHEA-AGSHFGYDFRGWRAYL 309
Query: 266 CGQKQMAEEVTSIVL 280
CG M E + ++
Sbjct: 310 CGPPPMIESCIAALM 324
>gi|187925112|ref|YP_001896754.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
phytofirmans PsJN]
gi|187716306|gb|ACD17530.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
phytofirmans PsJN]
Length = 343
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL+ + D GK ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYLEFILKD-GKRRSYSMANAPH---TEGPIELHIRHMPGGAFTDHVFNTMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F ++ + P VL+ A+G+G +P+++++E + LY+GAR
Sbjct: 190 FEAPLGTFF----LREDSDKPIVLL-ASGTGFAPLKAIVEHAVFKNLNRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAA 248
K + + ++W E K +PVLS+PD W+G G+V A
Sbjct: 245 KDLYLLELAEQWAREIPNFKFLPVLSEPDAGDAWTGRVGFVHRA 288
>gi|73541393|ref|YP_295913.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding subunit [Ralstonia
eutropha JMP134]
gi|72118806|gb|AAZ61069.1| phenol 2-monooxygenase P5 subunit [Ralstonia eutropha JMP134]
Length = 352
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEI 149
GQY+ + + P +IAS P+ +G E ++ V G +A L G+ +++
Sbjct: 136 GQYVNVWIGKEAAPRAFSIASAPT----AGEIELNIRLVPGGSATTYVHEQLSVGERLQL 191
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S +GR F ++ D P V + A GSG+S RS+I S ++ ++ L GARN
Sbjct: 192 SGPLGRFF----VRKSDPRPLVFM-AGGSGLSSPRSMILDLLESGDQREIVLVQGARNAG 246
Query: 210 RMAYQDKFKEW--ESSGVKIVPVLS-QPD-GNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ Y+D F+ + +PVLS +P+ +W GE GYV SR + +G L
Sbjct: 247 ELYYRDAFEALARQHDNFTYLPVLSGEPEQSDWGGERGYVHDLASRHFSQ-DFRGWRAYL 305
Query: 266 CGQKQMAEEVTSIVL 280
CG M E + ++
Sbjct: 306 CGPPPMIEACIATLM 320
>gi|260893189|ref|YP_003239286.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Ammonifex degensii KC4]
gi|260865330|gb|ACX52436.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ammonifex
degensii KC4]
Length = 277
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 80 DAPDIASS-HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
D P+++S+ GQ L + VG+ F +++S P G EF ++ + G L
Sbjct: 31 DDPEVSSAWQYLPGQIALLSLFGVGEAAF-SLSSAPL---GQGWLEFSIRRM-GKVTTAL 85
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE-RS 197
L+ G V I GRGF + + D +L+ G G++P+RSL+ + +E
Sbjct: 86 HQLEPGAKVGIRGPFGRGFPCELFRGHD----LLVIGGGIGMAPLRSLVNYVLARREDYG 141
Query: 198 DVRLYYGARNLKRMAYQDK-FKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKI 255
+ + YGAR+ ++ ++++ F W ++ ++ + P+ W G G+V + K
Sbjct: 142 RLEIVYGARSSRQFCFREEIFFLWPQAPDTQVYLTIDCPEEGWEGHVGFVPDYVAELKP- 200
Query: 256 FNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+P+G V+CG M E+ + + +G E+I
Sbjct: 201 -SPEGKYAVVCGPPIMIEKTIAWLEKQGFPPERI 233
>gi|254168351|ref|ZP_04875196.1| Oxidoreductase NAD-binding domain protein [Aciduliprofundum boonei
T469]
gi|289595760|ref|YP_003482456.1| oxidoreductase FAD/NAD(P)-binding domain protein [Aciduliprofundum
boonei T469]
gi|197622632|gb|EDY35202.1| Oxidoreductase NAD-binding domain protein [Aciduliprofundum boonei
T469]
gi|289533547|gb|ADD07894.1| oxidoreductase FAD/NAD(P)-binding domain protein [Aciduliprofundum
boonei T469]
Length = 270
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 19/195 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASG-AFEFLVKSVAGSTAEVLCGLKKGDVVE 148
+ GQ+++L V G+ +P S + A E +++V T ++ +K+GD V
Sbjct: 33 KPGQFVELSVFGYGE-------APISISGGDDEAIELTIRAVGNVTKKIH-RMKEGDYVG 84
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
I G G+ +++ + +LI A G G++P++ ++E +ER D L YGAR
Sbjct: 85 IRGPFGNGWPIEKAVDKN----ILIIAGGIGLAPLKPVVEYVCKHRERFKDATLLYGARR 140
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
M ++ KF+EW + I+ + + + W G G V + + + + T +CG
Sbjct: 141 PSLMLFKYKFEEWRKY-MDILLTVDEAEPGWEGHVGVVTTLCDKIRHVAD---TITYMCG 196
Query: 268 QKQMAEEVTSIVLAE 282
M + TS+VL E
Sbjct: 197 PPIMM-KYTSMVLIE 210
>gi|124266144|ref|YP_001020148.1| propane monoxygenase reductase [Methylibium petroleiphilum PM1]
gi|124258919|gb|ABM93913.1| propane monoxygenase reductase [Methylibium petroleiphilum PM1]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCG-LKKGDVVE 148
AGQ+++L V G ++AS S+ F+++ G+ + +L G LK G V
Sbjct: 139 AGQFVELSVPHAGVTRSYSMAST---QSSPDTVRFIIRKYPEGAFSSLLDGDLKPGTPVT 195
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G F R + P P VL+ GSG+SP+ S+++ S E+ +R YYGAR
Sbjct: 196 LKGPYGSCFR--REERPG--PMVLV-GGGSGMSPLWSILQDHIESGEQRPIRFYYGARTR 250
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIF-NPQGTGV 263
K + + ++F + + +PVLSQ + W GETG+V A R ++ P
Sbjct: 251 KDLFFVEEFAAIAAKLPDFEFIPVLSQATEEDAWQGETGFVHEAVERIQRARPQPGEVDA 310
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEK 288
CG M + + ++ GV+ ++
Sbjct: 311 YTCGPPPMVDALLPVLQRLGVALDR 335
>gi|406906903|gb|EKD47911.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[uncultured bacterium]
Length = 128
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 166 DEYP--TVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS 223
DE P ++ ATG+GI+PI ++IE E L++G R+ K + + +K+K+
Sbjct: 11 DENPKKNIVFIATGTGIAPINAMIE------ENKGGTLFWGLRHAKDIFWAEKYKD---- 60
Query: 224 GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
+ + LS+P+G+W+G G V + F + V +CG K M +E+ +LA G
Sbjct: 61 -LDLKLTLSKPEGDWTGLVGRVTEIVPKTAMDF--ENIRVYMCGNKSMTDEMKQYLLANG 117
Query: 284 VSSEKI 289
V E I
Sbjct: 118 VPPEDI 123
>gi|385333770|ref|YP_005887721.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Marinobacter adhaerens HP15]
gi|311696920|gb|ADP99793.1| oxidoreductase FAD/NAD(P)-binding domain protein [Marinobacter
adhaerens HP15]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
T T + E+SP + H+ +D +AGQY+ + + V ++A+PP
Sbjct: 108 TVTGIVELSPTIRGV-HLKLD-------RPMTFQAGQYINIELPGVDGARAFSLANPPGK 159
Query: 117 ASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
A E V+ V G A LK GD + +S G+ F V QP D ++
Sbjct: 160 ADE---VELHVRLVEGGAATTYIHEQLKTGDALNLSGPYGQ-FFVRSSQPGD----LIFI 211
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS 232
A GSG+S +S+I + + L+ GARNL + ++ F+ + + VP LS
Sbjct: 212 AGGSGLSSPQSMILDLLEQNDERKIVLFQGARNLAELYNRELFEALDRDHDNFTYVPALS 271
Query: 233 Q--PDGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCG 267
Q D W G GYV A AK F+ + G LCG
Sbjct: 272 QAEEDAEWQGFRGYVHDA---AKAHFDGRFAGNKAYLCG 307
>gi|189347573|ref|YP_001944102.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Chlorobium limicola DSM 245]
gi|189341720|gb|ACD91123.1| oxidoreductase FAD/NAD(P)-binding domain protein [Chlorobium
limicola DSM 245]
Length = 274
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF + I+D + + GQ+L L + G P S +SAS EF+
Sbjct: 21 EKLF--QLRIADPHERGIFRFKPGQFLMLELPGYGD-------VPISISSASSNHEFIEL 71
Query: 129 SV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
+ AG L + G V I G F +D + VL+ A G GI+P+R+
Sbjct: 72 CIRKAGHVTSALFRTEPGMHVAIRGPFGSSFPMDEMTGHH----VLLIAGGLGIAPLRAP 127
Query: 187 IESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGY 244
+ ++R DV L YGA+ ++ + +F+EW++ S +++ ++ D W G TG
Sbjct: 128 LFWINEHRDRFRDVHLLYGAKEPSQLLFSYQFEEWKTVSHIRLHTIVEHADAEWKGATGM 187
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ F Q T ++CG M + V S + G+ ++
Sbjct: 188 ITELFRDIS--IEAQNTYAIVCGPPVMFKFVCSYLDRLGIPMNRMF 231
>gi|29647422|dbj|BAC75406.1| butylphenol hydroxylase component A6 [Pseudomonas putida]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 29/211 (13%)
Query: 83 DIASSHTRAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLC 139
D A +AGQY+ L++ D +G F +IAS P +ASG E ++ V G T V
Sbjct: 128 DAAGMRFQAGQYINLQLPDGIGSRAF-SIASAP---AASGEIELNIRIVPGGRGTGYVHE 183
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ESGFSSKE 195
L+ G+ + ++ GR F Q P V+ GSG+S RS+I E GF
Sbjct: 184 QLQVGERIVVTGPYGRFFVKKSAQVP-----VIFMGGGSGLSSPRSMILDLLEDGFDLP- 237
Query: 196 RSDVRLYYGARNLKRMAYQDKF--KEWESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSR 251
+ L YG RN + Y ++F + VP LS +P+G +W G G+V A
Sbjct: 238 ---ITLIYGQRNRDELYYHEEFLAMAQQHPNFTYVPALSHEPEGSDWQGFRGFVHDA--- 291
Query: 252 AKKIFNP--QGTGVVLCGQKQMAEEVTSIVL 280
AK FN +G LCG M + S ++
Sbjct: 292 AKAHFNNDFRGHKAYLCGPPLMIDSCISTLM 322
>gi|28848927|gb|AAO47360.1| phenol hydroxylase component phP [Pseudomonas sp. OX1]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
T + E+SP + + H+ +D +AGQY+ + + V ++A+PPS A
Sbjct: 110 TDIVELSPTIKGI-HLKLD-------RPMTFQAGQYINIELPGVEGARAFSLANPPSKAD 161
Query: 119 ASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
E V+ V G A LK GD + +S G+ F V QP D ++ A
Sbjct: 162 E---VELHVRLVEGGAATTYIHEQLKTGDALNLSGPYGQ-FFVRSSQPGD----LIFIAG 213
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQP 234
GSG+S +S+I + + L+ GARNL + ++ F+ + + VP LSQ
Sbjct: 214 GSGLSSPQSMILDLLEQNDERKIVLFQGARNLAELYNRELFEALDRDHDNFTYVPALSQA 273
Query: 235 DG--NWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCG 267
D +W G GYV A A F+ + G LCG
Sbjct: 274 DEDPDWKGFRGYVHEA---ANAHFDGRFAGNKAYLCG 307
>gi|219851644|ref|YP_002466076.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Methanosphaerula palustris E1-9c]
gi|219545903|gb|ACL16353.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methanosphaerula
palustris E1-9c]
Length = 232
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 92 GQYLQ--LRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
GQ+L +R+ K + +I+S P+ S EF + + ++ L L+ G+ V +
Sbjct: 33 GQFLMVTIRINGEKKTKYFSISSSPT---ESEYIEFTKRITSHEFSKALDNLQVGETVYL 89
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER--SDVRLYYGARN 207
+ G+ EY V++ A G GI+P S+I G+ + R + + L YG R+
Sbjct: 90 NGPHGK------FTFTGEYQKVVMIAGGIGITPFMSMI--GYCTDNRIPAAITLLYGNRS 141
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ A++++ + ++ ++IV LS+P+ W G G++ R +++ + Q L
Sbjct: 142 EESAAFKEELANFMQKNRNLRIVHSLSRPEETWKGRRGHLDLTTIR-EEVPDYQDASFYL 200
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + E++ ++ AEG+ +++
Sbjct: 201 CGPPALVEDLERVLQAEGIPEDRV 224
>gi|77463419|ref|YP_352923.1| reductase component of monooxygenase [Rhodobacter sphaeroides
2.4.1]
gi|77387837|gb|ABA79022.1| Putative reductase component of monooxygenase [Rhodobacter
sphaeroides 2.4.1]
Length = 365
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 91 AGQYLQLRVVDVGKPTF---LAIASPPSFASASGAFEFLVKSV-AGSTAEVL--CGLKKG 144
AGQY+ + V T ++A+PPS + G F++K G + L G++ G
Sbjct: 150 AGQYVDITVTTEEGETITRSFSMANPPSETQSLG---FIIKKYPDGKFSNQLDSGGIRLG 206
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V ++ G F + P V++ GSG+SP+ S+++ +S E +V +YG
Sbjct: 207 AEVTVTGPYGMCFRREGRDGP-----VILVGAGSGMSPVWSILQDHLASGEAREVLFFYG 261
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQG 260
AR + + + ++ + V+ +PVLS D W+GE G+V A SR + +G
Sbjct: 262 ARTPEDLFHLEEIGSLTEAHPSVRFIPVLSHASIDCGWTGERGFVHEAVSRILREEGLEG 321
Query: 261 TG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G V CG M + + ++ SE+I
Sbjct: 322 QGDVYACGPPPMIDALQPVLFMLDFDSERIF 352
>gi|375105055|ref|ZP_09751316.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderiales
bacterium JOSHI_001]
gi|374665786|gb|EHR70571.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderiales
bacterium JOSHI_001]
Length = 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D + + ++A+ PS + A E ++ + G T +V +K D++
Sbjct: 133 RAGQYVEFILPDGVRRAY-SMANAPSRLGSPPAIELHLRHLPGGRFTDQVFSSMKPKDIL 191
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F ++ P VL+ A+G+G +PI++++E S R V LY+G R+
Sbjct: 192 RLEGPFGSFF----LREDSPRPAVLL-ASGTGFAPIKAILERLMESGPRGPVTLYWGCRS 246
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQP---DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ D +E +++ G+ VPVLS+P DG W+G G V A + + G
Sbjct: 247 RADLYLDDWVREAQAALPGLGYVPVLSEPLPQDG-WTGRVGLVHQAV--MADLPDLSGHQ 303
Query: 263 VVLCGQKQMAE 273
V CG M +
Sbjct: 304 VYACGVPVMVD 314
>gi|409198108|ref|ZP_11226771.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinilabilia
salmonicolor JCM 21150]
Length = 419
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 45/251 (17%)
Query: 73 HVSIDI----SDAPDIASSHTRAGQYLQLRVVDVG----KPTFLA--------------- 109
++ ID+ D DI G + + + D+ +PTF A
Sbjct: 173 YIQIDVPKIEVDFKDIEVEEDFRGDWEKFNMFDLKMKNPEPTFRAYSMANHPAENNIIML 232
Query: 110 ---IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPD 166
IA+PP F +G F+ K G + + KKGD V IS G F D +
Sbjct: 233 NIRIATPP-FDRVNGGFQ---KINPGVCSSFIFSRKKGDKVTISGPYGEFFIKDTNR--- 285
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSSKERSDVR--LYYGARNLKRMAYQDKFKEWES-- 222
++ G+G++P+RS I F + E++D + +YGAR+ + + Y++ F+E E
Sbjct: 286 ---EMMFIGGGAGMAPMRSHIFHLFHT-EKTDRKATFWYGARSKREIFYEEDFREIEKGF 341
Query: 223 SGVKIVPVLSQ--PDGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSI 278
LS+ P+ NW G TG++ + K P+ LCG M V +
Sbjct: 342 DNFDFTIALSEPLPEDNWEGSTGFIHSVIFEEYLSKHDEPEEIEYYLCGPPMMNAAVQKM 401
Query: 279 VLAEGVSSEKI 289
+ GV E I
Sbjct: 402 LYDLGVPDEMI 412
>gi|436834004|ref|YP_007319220.1| oxidoreductase FAD/NAD(P)-binding domain protein [Fibrella
aestuarina BUZ 2]
gi|384065417|emb|CCG98627.1| oxidoreductase FAD/NAD(P)-binding domain protein [Fibrella
aestuarina BUZ 2]
Length = 357
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA-EVLCG-LKKGDVVEI 149
GQ+L ++ +G S S A VK + G A LC LK GDV+E
Sbjct: 37 GQFLTF-LLTIGNEKIRRSYSMSSSPHVDAALSVTVKRLPGGLASNYLCDRLKPGDVIET 95
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+ MG ++ P +LI A GSGI+P+ S+++S + S+V L YG RN
Sbjct: 96 LEPMGT--FTPKLNPGARRLHILIGA-GSGITPLFSMVKSILHVEPNSEVWLIYGNRNES 152
Query: 210 RMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQG---TG 262
+ Y+ D +S + + VLSQP NWSG TG + ++ + + P+
Sbjct: 153 SIIYKAHLDAMASVHASRLTVTHVLSQPAANWSGFTGRINKSNLLKLLETHRPEALRQAE 212
Query: 263 VVLCG-QKQMAEEVTSIVL 280
LCG MAE V+++ L
Sbjct: 213 YYLCGPDGLMAETVSALNL 231
>gi|344345224|ref|ZP_08776079.1| Ferredoxin--NAD(+) reductase [Marichromatium purpuratum 984]
gi|343803175|gb|EGV21086.1| Ferredoxin--NAD(+) reductase [Marichromatium purpuratum 984]
Length = 336
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASA---SGAFEFLVKSVAGS--TAE 136
PD RAGQYL + + D + F SFASA S E ++ V G T E
Sbjct: 124 PDHDPLRFRAGQYLDVLLRDGSRRAF-------SFASAPALSPYLELHIRRVPGGRFTTE 176
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
V L + ++ + +G F +D P P +LI G+G +P++S+IE + ++
Sbjct: 177 VFERLGERALLRVQAPLG-DFGLD---PTSTAPAILI-GGGTGFAPLKSMIEDAIARGQQ 231
Query: 197 SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKK 254
+ LY GAR + D W E VLS+P+ +W G G V A +
Sbjct: 232 RPLLLYRGARTRADLYLPDLAPRWAAEHPWFGHQAVLSEPEPDWDGRRGLVHQAV--IED 289
Query: 255 IFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ G V + G M E +LA G+ + +
Sbjct: 290 FPDLAGHQVYISGPPAMIEHARPALLARGLDPAALFTD 327
>gi|83589667|ref|YP_429676.1| oxidoreductase FAD/NAD(P)-binding protein [Moorella thermoacetica
ATCC 39073]
gi|83572581|gb|ABC19133.1| Oxidoreductase FAD/NAD(P)-binding protein [Moorella thermoacetica
ATCC 39073]
Length = 276
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 30/244 (12%)
Query: 62 AEISPAAESLFHVSIDISDAPDIASSHTRA----------GQYLQLRVVDVGKPTFLAIA 111
A ++P + ++ I + PD+ + H GQ L ++DVG+ F +
Sbjct: 5 ARVNPLVPQMGRITKIIDETPDVKTFHVTTDAGKPFTPLPGQLAMLSLLDVGEAMFSITS 64
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
P E +K V G + L + G V I G GF ++ ++ D +
Sbjct: 65 QGPDH------LELAIKRV-GMLTDALHEAEPGQSVGIRGPYGNGFPLEMMRGKD----L 113
Query: 172 LIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDK-FKEW-ESSGVK 226
L G G++P+RSLI + + R D + + YGAR+ + ++D F W + +
Sbjct: 114 LFIGGGIGLAPVRSLIN--YCIEHRQDYGHLWIIYGARSPADLCFKDDLFNNWPKVENCR 171
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSS 286
+ + + D W G G+V A K P+G + CG M + V + G
Sbjct: 172 VDVTVDRGDDTWQGHEGFVPAFVEELKP--KPEGKVAITCGPPIMIKFVLQSMEKLGFKD 229
Query: 287 EKIL 290
E+I+
Sbjct: 230 EQIV 233
>gi|359446936|ref|ZP_09236565.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20439]
gi|358039227|dbj|GAA72814.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20439]
Length = 247
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + I ESLF +++ P +AGQ+ +L ++D K IA S
Sbjct: 4 WIDATVKSIKWWNESLFSITVHADVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A S EF L+ V G + L LK GD V I + F +D + P E +
Sbjct: 54 YVNAPQSPDLEFYLINVVDGLLSSHLATLKPGDTVLIERRATGFFTLDEV-PASE--QLW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVKIVP 229
+ +TG+ I P S+++ ++ + L +G R ++YQ +K + S + +P
Sbjct: 111 MLSTGTAIGPFLSMLQQSEVWQKYKHINLVHGVRQNSDLSYQELINKLIKSHPSQLNYIP 170
Query: 230 VLSQ--PDGNWSGETGYV---QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
V+S+ P +G V A + P +LCG QM ++ T ++LA+
Sbjct: 171 VVSREMPLQGLAGRITTVIENNALYEHVGLCATPNNAQFMLCGNPQMVKDTTELLLAQNY 230
Query: 285 SSEK 288
+
Sbjct: 231 KRNR 234
>gi|372487295|ref|YP_005026860.1| 2-polyprenylphenol 6-hydroxylase [Dechlorosoma suillum PS]
gi|359353848|gb|AEV25019.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Dechlorosoma
suillum PS]
Length = 337
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAF-EFLVKSVAGS--TAEVLCGLKKGDVVE 148
GQY+ + + D GK ++A+ P AF + ++ V G T V G+K+ D++
Sbjct: 135 GQYVDILLKD-GKRRSFSLANAPH----DDAFLQLHIRLVPGGLFTEHVFNGMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
++ G F ++ + P +L+ A G+G +PI++++E ++ + + +Y+G RN
Sbjct: 190 LNGPHGSFF----LREDSDKPMILL-AGGTGFAPIKAIVEHALYTQSKRPMVIYWGNRN- 243
Query: 209 KRMAYQDKF-KEW--ESSGVKIVPVLSQP---DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
K Y D+ W E S + VPVLS+P DG W+G TG V A + + G
Sbjct: 244 KAGLYMDELPARWAAEHSHITYVPVLSEPAATDG-WNGRTGLVHEAV--MQDFPDLSGHQ 300
Query: 263 VVLCGQKQMAE 273
V +CG M E
Sbjct: 301 VYVCGAPVMVE 311
>gi|291300951|ref|YP_003512229.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Stackebrandtia nassauensis DSM 44728]
gi|290570171|gb|ADD43136.1| oxidoreductase FAD/NAD(P)-binding domain protein [Stackebrandtia
nassauensis DSM 44728]
Length = 274
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 13/200 (6%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
AGQ+ L +G+ I S G +++V G ++ L G +V +
Sbjct: 41 AGQFAMLYAFGIGE-----IPISVSDGCDGGDLTHTIRAV-GKVSQALHDAAVGSIVAVR 94
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLK 209
GRG+ + P + VLI A G G++P+R I + ++ V + GA
Sbjct: 95 GPFGRGWTL----PAEPGRDVLIVAGGVGLAPLRPTIVAAARQRDNFGHVSVCAGAGGPS 150
Query: 210 RMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ + ++ +W +G+ + + +P WSG TG V + F F P T +LCG +
Sbjct: 151 GLLFTAEYDDWRRAGLDVRVTVDRPGPGWSGRTGLVTSMFDEVD--FAPGRTTALLCGPE 208
Query: 270 QMAEEVTSIVLAEGVSSEKI 289
M ++A GV E I
Sbjct: 209 PMMRAAARDLIARGVRDEDI 228
>gi|157363728|ref|YP_001470495.1| oxidoreductase FAD-binding subunit [Thermotoga lettingae TMO]
gi|157314332|gb|ABV33431.1| Oxidoreductase FAD-binding domain protein [Thermotoga lettingae
TMO]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 36/284 (12%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL---AEISPAAESLFHVSIDISDAP---- 82
P + + R + V++D + P L + E + +V+ DI +
Sbjct: 93 PYMTKEQIRENIRLSCQIKVKKDIEIEIPEELLFAKKFKAIVEKIRNVTYDIKELTLKLI 152
Query: 83 DIASSHTRAGQYLQLRVVDVGKPT-----FLAIASPPSFASASGAFEFLVKSVAG--STA 135
D S +AGQY+QL + K T +I+S PS E L++ V G +T
Sbjct: 153 DPPSIDFKAGQYIQLSIPPYEKITQTTQRAYSISSVPS---QKDRIELLIRLVPGGIATT 209
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ESGF 191
V +K+G+ VEI+ G + D T++ A GSG++PI+S+I E
Sbjct: 210 YVHKYMKEGEQVEITGPFGEFYV------RDTDATMICVAGGSGMAPIKSIIFDLYEKNI 263
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVK--IVPVLSQ--PDGNWSGETGYVQA 247
+++E + ++GA++LK + Y + F++ E K VP LS PD W+ + G +
Sbjct: 264 NNRE---IWYFFGAKSLKDLFYVEIFEDLEGKWDKFHFVPALSNPAPDDQWNKDVGLITE 320
Query: 248 AFSR--AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ KI + LCG M ++ + KI
Sbjct: 321 VLDKYMKDKIDKSRPLEGYLCGSPGMINACVDVMKKNNIPEGKI 364
>gi|17547153|ref|NP_520555.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia solanacearum
GMI1000]
gi|17429455|emb|CAD16141.1| putative reductase oxidoreductase protein [Ralstonia solanacearum
GMI1000]
Length = 349
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPVELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREASDKP-----IILLASGTGFAPIKAIIEHAAFVGIQRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + +EW + G + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPRDLYMHAMAEEWTRTLPGFRYVPVISDAQPEDGWTGRTGFVHQA 294
>gi|399021918|ref|ZP_10724007.1| 2-polyprenylphenol hydroxylase-like oxidoreductase, partial
[Herbaspirillum sp. CF444]
gi|398090441|gb|EJL80916.1| 2-polyprenylphenol hydroxylase-like oxidoreductase, partial
[Herbaspirillum sp. CF444]
Length = 336
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 81 APDIASSHTR---------AGQYLQLRVVDVGKPTFLAIASPPSFASAS-GAFEFLVKSV 130
APD+A R AGQY+ + + D + ++ S + A+ S E V+ +
Sbjct: 110 APDVAVLQLRCDGAAPAYQAGQYIDVLLADGQRRSY----SMATHAAGSPDMLELHVRHL 165
Query: 131 AGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G T V GL+ G+++E+ G + D P V++ A+G+G +PI++L+E
Sbjct: 166 PGGLFTDRVFGGLQAGEMLELEGPGGNFYLRDGASP------VILLASGTGFAPIKALVE 219
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPD--GNWSGETGY 244
+ +RLY+G R + ++W + VPVLS D W+G TG+
Sbjct: 220 EAIAKNNNRPMRLYWGGRRQADLYMDALCRDWAARLPWFDYVPVLSDADSASGWTGRTGF 279
Query: 245 VQAA 248
V A
Sbjct: 280 VHQA 283
>gi|456353030|dbj|BAM87475.1| phenol hydroxylase [Agromonas oligotrophica S58]
Length = 354
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L + D ++A+ P + F++K ++++ GL G +V
Sbjct: 147 AGQYVDLTIDDGRITRAFSMANAPGEGTR---LSFIIKKYPNGAFSSQLDGGLGVGSLVM 203
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F R Q P P +LI GSG+SP+ S++ +S E+ +R +YGAR+
Sbjct: 204 AKGPYGTCFR--REQRPG--PMLLI-GGGSGMSPLWSILADHIASGEQRPIRFFYGARSR 258
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ Y D+ + + K VP LS PD +W GETG+V +R + Q G +
Sbjct: 259 ADLFYLDQVAAIGEQLADFKFVPALSHATPDDHWDGETGFVHEVVARHLR--EEQLAGAI 316
Query: 265 ---LCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ GV + I
Sbjct: 317 DAYACGPTPMIDAVLPVLQVNGVEPDHI 344
>gi|258404330|ref|YP_003197072.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfohalobium retbaense DSM 5692]
gi|258406431|ref|YP_003199173.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfohalobium retbaense DSM 5692]
gi|257796557|gb|ACV67494.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfohalobium
retbaense DSM 5692]
gi|257798658|gb|ACV69595.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfohalobium
retbaense DSM 5692]
Length = 281
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 19/223 (8%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV- 130
F V++D D + S GQ QL V G+ TF+ I SPPS E+L SV
Sbjct: 31 FRVTLD--DEEKMRSFSFEPGQVGQLSVFGTGESTFV-INSPPS------RMEYLQFSVM 81
Query: 131 -AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
AG L L+ GD V + +G F ++Q + +L G G++P+R+L+
Sbjct: 82 RAGEVTTKLHDLRAGDKVGVRAPLGNWFPYQQMQGKN----ILFIGGGIGMAPLRTLLLY 137
Query: 190 GFSSKER-SDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQA 247
+++ ++L YGAR + Y+ + EWE+ + +V + + +W G +
Sbjct: 138 MLDNRDDYGQIKLIYGARGPYDLTYRGEIPEWEARDDLDLVLTVDREHPDWDKRVGLIPH 197
Query: 248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ +P+ T V CG M + + G E+I+
Sbjct: 198 VLLEEEP--SPENTVAVTCGPPIMIKFTIEALKKLGFEDEQII 238
>gi|226943024|ref|YP_002798097.1| Phenol hydroxylase, ferredoxin subunit [Azotobacter vinelandii DJ]
gi|226717951|gb|ACO77122.1| Phenol hydroxylase, Ferredoxin subunit [Azotobacter vinelandii DJ]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L++ + +IA+PPS A A E V+ V G +T + L+ GD
Sbjct: 133 QAGQYVNLQLPGIEGSRAFSIANPPSRAD---AVELHVRLVEGGLATTHIHRQLEVGDTA 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSDVR---LYY 203
EIS G+ F + +P LIF A GSG+S +S+I ER D R L+
Sbjct: 190 EISGPYGQFFV------RESHPGGLIFIAGGSGLSSPQSMI---LDLLERGDTRPMALFQ 240
Query: 204 GARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP- 258
GARN + + F+ E + VP L+Q D W+G G+V A AK F
Sbjct: 241 GARNRAELYNRALFERLAAEHANFTYVPALNQAGDDPEWTGFRGFVHDA---AKAHFENR 297
Query: 259 -QGTGVVLCGQKQMAEEVTSIVL 280
QG LCG M + + ++
Sbjct: 298 FQGNKAYLCGPPPMIDAAITTLM 320
>gi|242398274|ref|YP_002993698.1| NiFe hydrogenase I, subunit gamma [Thermococcus sibiricus MM 739]
gi|242264667|gb|ACS89349.1| NiFe hydrogenase I, subunit gamma [Thermococcus sibiricus MM 739]
Length = 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P++A T + GQ++QL + VG+ +S A G FE ++ AG V+
Sbjct: 45 EDPELAKKWTFKPGQFVQLTIPGVGEVPISICSS----AMRKGFFELCIRK-AGRVTTVI 99
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 100 HKLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 155
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D +W G G Q A
Sbjct: 156 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPDWPGLKGRPQQFVVEAN 214
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T + +CG +M + V ++ G E I
Sbjct: 215 T--NPKNTAIAVCGPPRMYKAVFESLINYGYRPENI 248
>gi|78189527|ref|YP_379865.1| hydrogenase/sulfur reductase subunit gamma [Chlorobium
chlorochromatii CaD3]
gi|78171726|gb|ABB28822.1| hydrogenase/sulfur reductase, gamma subunit [Chlorobium
chlorochromatii CaD3]
Length = 274
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF I I+D + +AGQ+L L + G P S +S+S E+L
Sbjct: 21 EKLF--QIRITDPAERTLFRFKAGQFLMLELPGYGD-------VPISISSSSSNHEYLEL 71
Query: 129 SV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS- 185
+ AG L +KGD V I G F +D + D + +L+ A G GI+P+R+
Sbjct: 72 CIRKAGHVTSALFDAQKGDHVAIRGPFGSSFPMDEM--ADHH--ILLIAGGLGIAPLRAP 127
Query: 186 LIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGY 244
L +V L YGA+ +M + +F+EWE + + + ++ D +W G+ G
Sbjct: 128 LFWVNEHRDHYKNVHLLYGAKEPAQMLFTWQFEEWEKINHINLHTIVEHSDQHWQGKVGM 187
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ F+ + + T ++CG M + V S + G+ ++
Sbjct: 188 ITELFNDIS--IDVKNTYAIVCGPPIMFKFVCSYLDKLGIPMNRMF 231
>gi|256828660|ref|YP_003157388.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfomicrobium baculatum DSM 4028]
gi|256577836|gb|ACU88972.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfomicrobium
baculatum DSM 4028]
Length = 276
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 13/232 (5%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ E+ ++ I I++ + + R GQ QL V VG+ TF+ +SP +
Sbjct: 13 IVEVIQETHNIKTFRIVINNEERMKAFTFRPGQVGQLSVFGVGESTFVINSSP----TRK 68
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
+F V V G L L+ GD + + +G F ++ ++ + ++ G G+
Sbjct: 69 DYLQFSVMRV-GEVTTRLHQLQPGDQIGVRAPLGNSFPLEDLKGKN----IVFVGGGIGM 123
Query: 181 SPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNW 238
+P+R+L + K+ D+ L YGAR+ + Y+ + EW E V V + P W
Sbjct: 124 APLRTLFTYMLDNRKDYGDITLLYGARSPADLTYKAELPEWTERKDVNTVLTIDNPSDGW 183
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ G + +P+ T V CG M + + G E IL
Sbjct: 184 EHKVGLIPNVLLEINP--SPKNTVAVTCGPPIMIKFTLQALKKLGFEDENIL 233
>gi|452951880|gb|EME57322.1| oxidoreductase [Rhodococcus ruber BKS 20-38]
Length = 290
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASS-------HTRAGQYLQLRVVDVGKPTFLAIAS 112
P A + P+A + +++ +DA ++ + R GQ++ L VG+ ++I+
Sbjct: 17 PDAPMLPSAHRVRARTVETADAVTLSLAPLGAPRPQFRPGQFMMLYAPGVGE-IAISISG 75
Query: 113 PPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
P+ +G V+ V G+ + L G +V + G G+ ++ D ++
Sbjct: 76 DPT--DTTGELVHTVRKV-GAVSRALHDAAPGAIVGVRGPFGAGWDLESCTGRD----LV 128
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEWESSGVKIVP 229
I A G G++ +R+ + ++ R D R L GAR + Y+ + ++W GV++
Sbjct: 129 IVAGGVGLAAVRAAVLGAVAA--RGDFRRVVLVVGARRPAEILYRRELQDWADGGVEVRL 186
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ QP WSG G+V +R +P T +LCG + M ++L +G+ I
Sbjct: 187 TIDQPVQGWSGSVGFVTEPLARLD--LDPGRTTALLCGPEAMMRFSARVLLGKGIRPPDI 244
>gi|339629435|ref|YP_004721078.1| aromatic/alkene monooxygenase subunit gamma [Sulfobacillus
acidophilus TPY]
gi|379007449|ref|YP_005256900.1| phenol 2-monooxygenase [Sulfobacillus acidophilus DSM 10332]
gi|339287224|gb|AEJ41335.1| aromatic/alkene monooxygenase subunit gamma [Sulfobacillus
acidophilus TPY]
gi|361053711|gb|AEW05228.1| Phenol 2-monooxygenase [Sulfobacillus acidophilus DSM 10332]
Length = 351
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+++I P + + + +++ P + AGQY+ L + G ++AS PS +
Sbjct: 110 VSQIEPLTHDIRRLCVHLAEEPGLKFF---AGQYVDLSLTQYGITRSYSMASTPS---SP 163
Query: 121 GAFEFLVKSV-AGSTAEVL-CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
EF++K G+ + +L LK GD V ++ G R ++ P VL+ GS
Sbjct: 164 RELEFIIKVYPDGAFSSLLDTALKPGDPVRVTGPYG--ICCRRT---NDGPLVLV-GGGS 217
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QP 234
G++P+ S++ +E VR +YG R + Y D+ +E + + +P LS
Sbjct: 218 GMAPLLSILRDLVEHQEDRPVRFFYGGRTANDLFYVDEIQELGRRLTDFEWIPGLSHLHE 277
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NW+GE G++ R +CG + + V ++ +GV E+I
Sbjct: 278 PHNWTGEPGFIHEVVQRRLDPVWATNADAHVCGPPPLIDAVIPVLRMKGVDVERI 332
>gi|451945945|ref|YP_007466540.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Desulfocapsa
sulfexigens DSM 10523]
gi|451905293|gb|AGF76887.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Desulfocapsa
sulfexigens DSM 10523]
Length = 278
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 17/204 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+L L V G+ +SP L AG + G+KKGD V I
Sbjct: 41 GQFLMLSVPHCGEAAISISSSPDRLPLVD-----LSIRRAGELTTAIHGMKKGDQVGIRG 95
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE-----SGFSSKERSDVRLYYGAR 206
G+ F ++ D +L A G G++P++S+I+ SG + L YG+R
Sbjct: 96 PFGKAFPIEDFANRD----LLFVAGGIGLAPLKSVIDHCLFQSGLEEDAVQSITLLYGSR 151
Query: 207 NLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+A++ + W+ GV + + D W+G G V + N T ++C
Sbjct: 152 TPSDIAFKQAIESWQKQGVDCRLTVDEKDSTWNGHVGLVTELLTDVTITGN---TKALVC 208
Query: 267 GQKQMAEEVTSIVLAEGVSSEKIL 290
G M V + + G E I
Sbjct: 209 GPPIMIRFVIASLADLGCGDESIF 232
>gi|344339672|ref|ZP_08770600.1| Ferredoxin--NAD(+) reductase [Thiocapsa marina 5811]
gi|343800408|gb|EGV18354.1| Ferredoxin--NAD(+) reductase [Thiocapsa marina 5811]
Length = 345
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL + D G+ +IA+ P E V+ V G TA V + + ++
Sbjct: 132 AGQYLDFILRD-GRRRAFSIANAPH---DDAEIELHVRHVPGGEFTAYVFDSMPEKSILR 187
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I MG + P +++ G+G +P++ +IE + LY+G R
Sbjct: 188 IQGPMGTFVLREDSDRP-----IIMMGGGTGFAPLKGMIEHAIHIGLDRPIALYWGVRTQ 242
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + D W + G + VPVLS+PD +W G TG+V A +P G + +
Sbjct: 243 RDLYLTDLPATWARQLPGFRFVPVLSEPDPHWQGRTGFVHMAVLEDHP--DPSGFDLYMS 300
Query: 267 GQKQMAEEVTSIVLAEGVSSEKILKN 292
G M E G+ +++ +
Sbjct: 301 GPPVMVEAGRVAFEDAGLDRDRMFSD 326
>gi|407275476|ref|ZP_11103946.1| phenol hydroxylase [Rhodococcus sp. P14]
Length = 342
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 108/250 (43%), Gaps = 34/250 (13%)
Query: 41 LATLAAAAVRQDTTVWTPTPLAEISPAA--ESLFHVSIDISDAPDIASSHTR-------- 90
LA A+ R D TV PL+E +P L + + + DIA R
Sbjct: 73 LALACQASPRTDLTV---APLSETAPVGPRHPLRDHAGTVLELTDIARCTRRLVVELDEP 129
Query: 91 ----AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKK 143
AGQY +L V ++A+PPS S EF +K V G A + L+
Sbjct: 130 MEFSAGQYAELVVPGSVVARQYSMANPPS---ESRRLEFHIKKVDGGLATEGWIFGSLRP 186
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
GD +E+ +G+ FA + P E P +LI G+G++P++S++ SS + LY+
Sbjct: 187 GDRIELRGPLGQ-FA---LVHPQEEPAILI-GGGTGLAPLKSIVRHALSSDLVPSIDLYH 241
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
G R + D F+ E+ S + PVLS+ W G TG V + +G
Sbjct: 242 GGRGQADLYDVDFFRALEAADSRFRYHPVLSEE--QWDGATGMVTDVV--LDDFASCRGR 297
Query: 262 GVVLCGQKQM 271
LCG M
Sbjct: 298 SAYLCGPPAM 307
>gi|410668986|ref|YP_006921357.1| FAD and NAD-binding oxidoreductase [Thermacetogenium phaeum DSM
12270]
gi|409106733|gb|AFV12858.1| putative FAD and NAD-binding oxidoreductase [Thermacetogenium
phaeum DSM 12270]
Length = 634
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
S A G+F+ +++V G+ L LK+GD+V I G G+ V+ ++ D VL+
Sbjct: 418 SCADVKGSFDHTIRAV-GNVTNALAQLKEGDIVGIRGPFGFGWPVEEMKGKD----VLLV 472
Query: 175 ATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWE---SSGVKIVPV 230
A G G++P+R +I+ + + E + YG R + M + D++ EW + + +
Sbjct: 473 AGGIGLAPLRPVIKYIQARRSEYGTFEILYGCRTPEGMLFTDEYDEWRRIPDTRLHLTVD 532
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
P W G V F + + T VV CG M + V +L G S E+I
Sbjct: 533 FCPPGVEWGHSIGVVTTLFDKIS--VGKENTIVVTCGPDIMMKFVVLDLLKRGWSPEQI 589
>gi|371775771|ref|ZP_09482093.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
sp. HS1]
Length = 419
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 43/251 (17%)
Query: 73 HVSIDI----SDAPDIASSHTRAGQYLQLRVVDVG----KPTFLA--------------- 109
++ ID+ D DI G + + ++ D+ +PTF A
Sbjct: 173 YIQIDVPKIDVDFKDIEVEEEFRGDWEKYKMFDLKMHNPEPTFRAYSMANHPAENNIIML 232
Query: 110 ---IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPD 166
IA+PP F +G F+ K G + + K GD V IS G F D +
Sbjct: 233 NVRIATPP-FDRVNGGFQ---KVNPGVCSSYIFSRKPGDKVTISGPYGEFFLKDTNR--- 285
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESS-- 223
++ G+G++P+RS I F + K V +YGAR+ + + Y D F E +
Sbjct: 286 ---EMMFIGGGAGMAPMRSHIFHLFHTLKTDRKVSFWYGARSKREIFYYDDFHNIEKNFD 342
Query: 224 GVKIVPVLSQP--DGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
K LS+P + NW G TG++ + K P+ LCG M V ++
Sbjct: 343 NFKFTIALSEPLPEDNWDGPTGFIHSVIFEEYLSKHEEPEEIEYYLCGPPMMIAAVQKML 402
Query: 280 LAEGVSSEKIL 290
GV E I+
Sbjct: 403 YDLGVPDEMIM 413
>gi|296269833|ref|YP_003652465.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thermobispora bispora DSM 43833]
gi|296092620|gb|ADG88572.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thermobispora
bispora DSM 43833]
Length = 287
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 120 SGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
SG +++V G+ + LC ++ GD+V + G GF + D V++ A G G
Sbjct: 77 SGGLVQTIRAV-GAVSTALCRMRPGDLVGVRGPYGTGFDLTAAAGRD----VVVAAGGLG 131
Query: 180 ISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGN 237
++P+R +I + + R V + GA+ K + Y + W + G+ + + PD
Sbjct: 132 LAPLRPVIRELAAHRSRYGRVSVIVGAQVPKTLLYPRELDRWRDRHGIDVRVTVDHPDEG 191
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W+G G V R ++ P+ T +CG + M ++ GV+ E++
Sbjct: 192 WTGHVGLVTRLLDRI--VYEPRDTHAFVCGPEPMMYATAEELVRRGVAPERV 241
>gi|385204401|ref|ZP_10031271.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
gi|385184292|gb|EIF33566.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. Ch1-1]
Length = 338
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 26/259 (10%)
Query: 45 AAAAVRQDTTVWTPTPLAEISPAAESLFH-------VSIDISDAPDIASSHTRAGQYLQL 97
+A V D + +P P A S + +L H +++ I IA R GQY+ +
Sbjct: 82 SALVVSTDRPLASPVPAARHSASVVALEHAADRVVKLTLAIDGQERIA---FRPGQYMHV 138
Query: 98 RVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGR 155
+ + G +F ++AS P+ A+ + F ++ + G T L L GD +++ +G
Sbjct: 139 HLGEAGVRSF-SMASSPNEATVA----FHIRRIEGGYFTDGRLATLAVGDTLDVELPLG- 192
Query: 156 GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQD 215
GF ++Y +++ ATG+GI+P+ +++ + +R + L++G R + + D
Sbjct: 193 GFGYHE----EDYRPIVMIATGTGIAPLYAMLGELLADADRPPIALFWGGRTPQDLYLHD 248
Query: 216 KFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
+ PVLS+ +W+G GYVQ A S + + V CG M
Sbjct: 249 TLAALAAQHDDFDYTPVLSRAGASWTGARGYVQQAVS--AQFPDLSEHAVYACGSPDMIA 306
Query: 274 EVTSIVLAEGVSSEKILKN 292
GVS+ +
Sbjct: 307 SAKRAFAELGVSARYFYAD 325
>gi|212223684|ref|YP_002306920.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus onnurineus
NA1]
gi|212008641|gb|ACJ16023.1| hydrogenase (gamma subunit) [Thermococcus onnurineus NA1]
Length = 291
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 83 DIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGL 141
+IA + T + GQ++QL + VG+ +SP G FE ++ AG V+ L
Sbjct: 42 EIAENWTFKPGQFVQLTIPGVGEVPISICSSP----MKRGFFELCIRK-AGRVTTVVHKL 96
Query: 142 KKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVR 200
K GD V + G GF VD + D +L+ A G G +P+RS+ ++ + ++
Sbjct: 97 KPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYGNIT 152
Query: 201 LYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIF 256
AR K + + + + E+ V+I+ +++ D +W G G Q A
Sbjct: 153 FINTARYGKDLLFYKELEAMKDLAEAENVQIIQSVTR-DPDWPGRHGRPQKFIVEANT-- 209
Query: 257 NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
NP+ T + +CG +M + V ++ G E I
Sbjct: 210 NPKNTAIAICGPPRMYKAVFEALINYGYRPENI 242
>gi|312795319|ref|YP_004028241.1| Flavodoxin reductase [Burkholderia rhizoxinica HKI 454]
gi|312167094|emb|CBW74097.1| Flavodoxin reductase family protein [Burkholderia rhizoxinica HKI
454]
Length = 343
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++AS P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGTRRSY-SMASAPHH---EGPLELHIRHMPGGVFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + LY+G R
Sbjct: 190 FEGPLGTFFLREDADKP-----IVLLASGTGFAPIKAIIEHAIFKGMTRPMTLYWGGRRR 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ ++W + K VPVLS+PD W G TG+V A + + + G V
Sbjct: 245 GDLYLASLAEQWARDVPNFKFVPVLSEPDPADGWQGRTGFVHRAV--VEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|257092936|ref|YP_003166577.1| Oxidoreductase FAD-binding domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045460|gb|ACV34648.1| Oxidoreductase FAD-binding domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 637
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY+ + ++D G+ + A+PP E ++ + G T V +K+GD V
Sbjct: 426 KAGQYVNI-ILDDGQRRAFSFANPPH---EDEFVELQIRLMPGGRFTTHVFEQMKEGDEV 481
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+G D + P V + A +G +P++S++E F + ++ LY+G +
Sbjct: 482 RFEGPIG-----DFSLRESDRPIVFV-AGATGFAPVKSMVEDAFKRGLKREIHLYWGVKG 535
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA----FSRAKKIFNPQ 259
LK + + W E + +PVLS+ P+ WSG TG V A F K+
Sbjct: 536 LKDLYLPELPTRWAREHANFHFIPVLSEAAPEDQWSGRTGLVHEAILEDFPELKQ----- 590
Query: 260 GTGVVLCGQKQMAEEVTSIVLAEG 283
+ CG +M E + + G
Sbjct: 591 -HEIYACGSVRMIEAIFPFLKQHG 613
>gi|182677501|ref|YP_001831647.1| oxidoreductase FAD/NAD(P)-binding subunit [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633384|gb|ACB94158.1| oxidoreductase FAD/NAD(P)-binding domain protein [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 289
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEI 149
GQ+ L V VG+ P S + S V ++ G+ + + L+ G + +
Sbjct: 55 GQFNMLSVFGVGE-------VPISISGGSADDVVFVHTIRDLGAVSGAIAKLQPGTTIGL 107
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNL 208
G G+ V ++ D ++I A G G++P+R I +++ R V + YGAR
Sbjct: 108 RGPFGMGWPVTDVEGAD----IVIVAGGLGLAPLRPAIYQILANRNRYGRVAILYGARTP 163
Query: 209 KRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ Y+ + ++W + S + I + +W G G V A SR F+P T +LCG
Sbjct: 164 NDILYRRELEQWRQRSDMDIEVTVDHASPDWHGNVGVVPALVSRMA--FDPHETIALLCG 221
Query: 268 QKQMAEEVTSIVLAEGVSSEKI 289
+ M S++ A G+ S+ I
Sbjct: 222 PEVMMRFTVSVLRAVGLPSDHI 243
>gi|113868978|ref|YP_727467.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia eutropha H16]
gi|113527754|emb|CAJ94099.1| 2-Polyprenylphenol hydroxylase [Ralstonia eutropha H16]
Length = 352
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G ++G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EDGPIELHIRHMPGGAFTDYVFGAREGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + + P +++ A+G+G +PI++++E + + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESEAP-----IILLASGTGFAPIKAIVEHAAYTGIQRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R K + ++W E + VPV+S P+ NW G TG+V A
Sbjct: 245 WGGRRPKDLYMHALCEQWARELPNFRYVPVISDALPEDNWQGRTGFVHQA 294
>gi|365895087|ref|ZP_09433212.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365424173|emb|CCE05754.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 346
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAI------ASPPSFASASGAFEFLVKSV-AGSTAEVLCG-LK 142
AGQY VD+ P AI A+PPS S A F++K G + L G L+
Sbjct: 138 AGQY-----VDITLPGSEAITRSFSMANPPS---ESQALSFIIKKYPNGRFSSRLDGELE 189
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G + + G F +R P +++ GSG+SP+ S+++ +S E V +
Sbjct: 190 VGAQIRLKGPYGTCFRRERRTGP-----MILVGGGSGMSPLWSILQDHLASGEDRQVCFF 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYV-QAAFSRAKKIFN 257
YGAR + Y D+F ++ +PVLS D W G+ G+V + + + +
Sbjct: 245 YGARTRNDLFYLDRFAAIAAACPSFSFIPVLSHAADDQAWEGQRGFVHEVVHAHLRSVGG 304
Query: 258 PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
V CG M + +T ++ GV +E+I
Sbjct: 305 GDDADVYACGPSPMIDALTPVLQISGVDAERIF 337
>gi|344172136|emb|CCA84764.1| putative Ferredoxin--NAD(+) reductase [Ralstonia syzygii R24]
Length = 349
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPLELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IVLLASGTGFAPIKAIIEHAAFIGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + +EW + G VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPRDLYMHALAEEWARTLPGFGYVPVISDAQPEDGWTGRTGFVHQA 294
>gi|167585730|ref|ZP_02378118.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia ubonensis
Bu]
Length = 343
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 21/167 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYIEFILKDGSRRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYGA 205
+G F ++ + P VL+ A+G+G +PI+++IE K R R LY+GA
Sbjct: 190 FEGPLGTFF----LREDSDKPIVLL-ASGTGFAPIKAIIE---HVKHRGITRPMTLYWGA 241
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAA 248
R K + + ++W E + VPVLS+PD W+G TG+V A
Sbjct: 242 RRKKDIYLAELAEQWAGEIPNFRFVPVLSEPDDADQWTGRTGFVHRA 288
>gi|268318130|ref|YP_003291849.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Rhodothermus marinus DSM 4252]
gi|262335664|gb|ACY49461.1| oxidoreductase FAD/NAD(P)-binding domain protein [Rhodothermus
marinus DSM 4252]
Length = 287
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
R GQ+ L V +G+ P S + + LV ++ G + LC K GDV+
Sbjct: 51 RPGQFNMLYVFGIGE-------VPISISGDPAQPDRLVHTIRAVGPVSTALCARKAGDVI 103
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGAR 206
+ G + V+ + D V++ A G G++P+R I + ++ L YGAR
Sbjct: 104 GVRGPFGSAWPVEAAEGYD----VVVMAGGIGLAPLRPAIYHLLQHRGHYGNLVLLYGAR 159
Query: 207 NLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Y + + W V++ + W G G V RA F+P+ T +
Sbjct: 160 TPRDLLYVRELERWRGRFDVQVEVTVDHAGAGWFGHVGVVTTLLPRAH--FDPEETVAFV 217
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M ++ GV+ E+I
Sbjct: 218 CGPEIMMRFAAKALMERGVAPERI 241
>gi|30248608|ref|NP_840678.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Nitrosomonas europaea
ATCC 19718]
gi|30180203|emb|CAD84505.1| putative reductase oxidoreductase protein [Nitrosomonas europaea
ATCC 19718]
Length = 348
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGDV 146
GQY+ + + D + +F S A+A EFL ++ AG + V +K+ D+
Sbjct: 136 GQYIDILMKDGQRRSF-------SLANAPANDEFLQLHTRNYAGGVFSEYVFSHMKEKDI 188
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE----RSDVRLY 202
+ +G F D P + P +L+ A G+G +P++S++E F ++ + +RLY
Sbjct: 189 LRFEGPLGSFFLHD--APKKDTPIILL-AGGTGFAPVKSMLEHIFQTENTRFTHNTIRLY 245
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYV-QAAFSRAKKIFN 257
+GAR + + ++W E+ +PVLS+P +W G TG V QA + + +
Sbjct: 246 WGARTRDGLYLSNLAEKWAAENENFSYIPVLSEPLITDDWQGRTGLVHQAVINDMNTLSD 305
Query: 258 PQGTGVVLCGQKQMAE 273
Q V CG M +
Sbjct: 306 CQ---VYACGAPAMVK 318
>gi|389685964|ref|ZP_10177287.1| oxidoreductase, FAD/NAD-binding domains/2Fe-2S iron-sulfur cluster
binding domain protein [Pseudomonas chlororaphis O6]
gi|388550306|gb|EIM13576.1| oxidoreductase, FAD/NAD-binding domains/2Fe-2S iron-sulfur cluster
binding domain protein [Pseudomonas chlororaphis O6]
Length = 343
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 91 AGQYLQLRV-VDVGKPT-FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
AGQYL L V VD K +I+S P VK VAG + ++ L GD
Sbjct: 36 AGQYLTLEVDVDGAKGCRAYSISSTPGLDKT---LSITVKRVAGGKVSNRLVQELSAGDA 92
Query: 147 VEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
V+ GR FA P +++ A GSGI+PI S+++S + S V L YG
Sbjct: 93 VQTLGTHGRFTFAPQ----PGRGRHLVLLAAGSGITPIFSILKSALHFEPDSQVSLIYGN 148
Query: 206 RNLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIF----NP 258
RN + + ++DK + + +++V VLS+PD + E + R I P
Sbjct: 149 RNRESVIFRDKLDQLRQTFGERLQLVHVLSRPDTPGAHEGRLTR---ERVMDILGALPGP 205
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
Q CG M +EVT+ + A G++ E +
Sbjct: 206 QAREYYSCGPSGMMDEVTAALEALGIAPESV 236
>gi|406949990|gb|EKD80347.1| hypothetical protein ACD_40C00128G0005 [uncultured bacterium]
Length = 242
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
AGQY +++ D G+ +IAS P + F+ L + + G+ +E L ++ G +E+
Sbjct: 42 AGQYASIQINDKGERRSYSIASTPD---DNHGFQLLAEMMEKGAGSEFLKNIEIGATIEV 98
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD-VRLYYGARNL 208
+G+ F + + D +L ATGSGI PI S+I +K VRL++G R+
Sbjct: 99 VAPLGK-FVIQQ----DTNSKLLFVATGSGIVPIWSMINDLLINKHYQQPVRLHWGMRSE 153
Query: 209 KRMAYQDKFKEWESSGVKIV--PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ + + D + + V VLS P W +G+VQ R +C
Sbjct: 154 EDVFWIDNLERLAEANPNFVFDLVLSSPSAEWELCSGHVQNCLIRDFGSLGLVEWDGYIC 213
Query: 267 GQKQMAEEVTSIVLAEGVSSEKI 289
G ++M +E +++ ++ +KI
Sbjct: 214 GNQEMVKETVAVLKELKMNPDKI 236
>gi|483483|emb|CAA55665.1| phenol hydroxylase [Pseudomonas putida]
gi|1093591|prf||2104263F catechol dioxygenase
Length = 353
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVV 147
+AGQY+ L + V ++A+PPS A E ++ V G A LK GD V
Sbjct: 133 QAGQYINLTLPGVEGSRAFSLANPPSQADE---VELHIRLVEGGAATSFIHRQLKVGDAV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+S G+ F D Q D ++ A GSG+S +S+I F + + L+ GARN
Sbjct: 190 ELSGPYGQFFVRDS-QAGD----LIFIAGGSGLSSPQSMIFDLFERGDTRQITLFQGARN 244
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ ++ F+E + S VP L+Q D W G G+V A AK F+ + +G
Sbjct: 245 RAELYNRELFEELAARHSNFSYVPALNQAHDDPEWQGFKGFVHDA---AKAHFDGRFSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + + ++
Sbjct: 302 KAYLCGPPPMIDAAITTLM 320
>gi|57642006|ref|YP_184484.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus kodakarensis
KOD1]
gi|21327886|dbj|BAC00529.1| sulfhydrogenase gamma subunit [Thermococcus kodakaraensis]
gi|57160330|dbj|BAD86260.1| cytosolic NiFe-hydrogenase, gamma subunit [Thermococcus
kodakarensis KOD1]
Length = 294
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
PL E E LF + DA ++A T R GQ++QL + VG+ +S A
Sbjct: 29 PLTE----KEKLFLFRFE--DA-ELAEKWTFRPGQFVQLTIPGVGEVPISICSS----AM 77
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G FE ++ AG V+ LK GD V + G GF VD + D +L+ A G
Sbjct: 78 RRGFFELCIRK-AGRVTTVVHRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGL 132
Query: 179 GISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQ 233
G +P+RS+ ++ + ++ AR K + + + + E+ VKI+ +++
Sbjct: 133 GTAPLRSVFLYAMDNRWKYGNITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR 192
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
D +W G G Q A NP+ T V +CG +M + V ++ G E I
Sbjct: 193 -DPDWPGLHGRPQNFIPEANT--NPKKTAVAICGPPRMYKAVFEALINYGYRPENI 245
>gi|394990330|ref|ZP_10383162.1| hypothetical protein SCD_02756 [Sulfuricella denitrificans skB26]
gi|393790595|dbj|GAB72801.1| hypothetical protein SCD_02756 [Sulfuricella denitrificans skB26]
Length = 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE--VLCGLKKGDVVE 148
AGQY+ + + D + + ++A+ P S + ++ V G + V + + ++
Sbjct: 134 AGQYIDILLKDGARRAY-SLANAPHDDSF---LQLHIRRVPGGSFSDLVFTQMHEKALLR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +L+ A+G+G +P+++++E F + + Y+GA NL
Sbjct: 190 FEGPLGTFFLREDSDKP-----ILLLASGTGFAPVKAILEHAFHHGIKRPITFYWGAHNL 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYV-QAAFSRAKKIFNPQGTGV 263
+ D K+W E + K VPVLS+ P+ +W G TG++ + + N Q V
Sbjct: 245 SHLYMLDLPKKWEQEHANFKFVPVLSEPSPEDHWKGRTGFLHETVLEDYADLENYQ---V 301
Query: 264 VLCGQKQMAE 273
CG M E
Sbjct: 302 YACGAPVMVE 311
>gi|71905921|ref|YP_283508.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Dechloromonas aromatica
RCB]
gi|71845542|gb|AAZ45038.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Dechloromonas aromatica RCB]
Length = 336
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ + + D GK ++A+ P + ++ V G T +V +K D++
Sbjct: 134 AGQYIDILLKD-GKKRSYSLANAPH---DDALLQLHIRHVPGGLFTDQVFSTMKVRDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G + + + P +++ A G+G +PI++++E + + + +Y+GA+
Sbjct: 190 FNGPHGTFYLREDSKKP-----MILLAGGTGFAPIKAIVEHAIAEQCERPMFIYWGAKAR 244
Query: 209 KRMAYQDKFKE-W--ESSGVKIVPVLSQP-DGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ YQ+ E W E +K VPVLS+P G W+G +G+V A + G V
Sbjct: 245 VDL-YQNALPEQWTAEHGSIKYVPVLSEPASGEWAGRSGFVHQAV--LADFADLSGYQVY 301
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M E +A G+ E+ +
Sbjct: 302 ACGAPVMIEAAKRDFMARGLPEEEFFAD 329
>gi|293392671|ref|ZP_06636990.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
odorifera DSM 4582]
gi|291424788|gb|EFE97998.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
odorifera DSM 4582]
Length = 407
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + + +YGAR+L+ M Y+D F + ++ QP+ NW+G TG++
Sbjct: 296 KRLKSKRKITFWYGARSLREMFYEDDFNHLQDENENFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|147677740|ref|YP_001211955.1| 2-polyprenylphenol hydroxylase and related flavodoxin
oxidoreductases [Pelotomaculum thermopropionicum SI]
gi|146273837|dbj|BAF59586.1| 2-polyprenylphenol hydroxylase and related flavodoxin
oxidoreductases [Pelotomaculum thermopropionicum SI]
Length = 280
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + +I + +++ D + + GQ +L V G+ T ++I S P+
Sbjct: 11 PATITKIVDETGDVKTFTVEFDDPEVMERFGNKPGQVAELSVFGEGEAT-ISITSSPT-- 67
Query: 118 SASGAF-EFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
G F EF V+ V G VL ++ G + + G F + ++ D +F
Sbjct: 68 --RGKFLEFSVRRV-GRLTSVLHQMEVGQKIGVRGPYGNWFPYEMMKGKD------LFFI 118
Query: 177 GSGIS--PIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQ-DKFKEW-ESSGVKIVP 229
G GI+ P+RSLI+ S + R D V + YGAR+ + ++ D F+ W + K+
Sbjct: 119 GGGIALAPLRSLIDFVLSEQYRKDYGKVEILYGARSYNDLCFKSDLFERWPKCPNTKVYT 178
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ +P+ W+G G+V +P+ ++CG M + +++ G S E+I
Sbjct: 179 TIDRPEEGWTGHVGFVPNYVEEVNP--SPENKIAIICGPPIMIKFTLAVMEKLGFSDEQI 236
Query: 290 L 290
+
Sbjct: 237 I 237
>gi|148258646|ref|YP_001243231.1| ferredoxin [Bradyrhizobium sp. BTAi1]
gi|146410819|gb|ABQ39325.1| Ferredoxin [Bradyrhizobium sp. BTAi1]
Length = 292
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 21/256 (8%)
Query: 41 LATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVV 100
+A L+ R+ TV P + + E++ V++ P A GQ++ +R
Sbjct: 49 IAELSEPPARERPTV--PARVIALKRETENVMRVTLRF---PPFAKPDYTPGQFIGIRHS 103
Query: 101 DVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFA 158
D +F +IA+ P S+ E + VAG T V LK ++++++ G F
Sbjct: 104 DGFDRSF-SIANAPREDSS---IELHIGRVAGGAFTGHVFEQLKINEILQVNGPFG-SFV 158
Query: 159 VDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK 218
Q P + A G+GI+PIR+++E+ S + LY+G+ N + K
Sbjct: 159 YSSQQRPS-----IFVAGGTGIAPIRAILEALTQEISSSPLHLYWGSSNRNGFYIDGEIK 213
Query: 219 EWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVT 276
++ G+ PVLS PD +W+G G V A + + G V CG M
Sbjct: 214 SLCAAIHGLTYAPVLSVPDASWTGRAGLVHEAV--LQDFADLSGIDVYACGNPHMVNATY 271
Query: 277 SIVLAEGVSSEKILKN 292
V + G ++ +
Sbjct: 272 KAVCSRGARPDRFFAD 287
>gi|395777099|ref|ZP_10457614.1| anaerobic sulfite reductase subunit B [Streptomyces acidiscabies
84-104]
Length = 260
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
S ++G V++V G+ + LC + GDV+ + G G+ ++R + D VL+
Sbjct: 48 SSVQSTGGLAHTVRAV-GAVSAGLCEARVGDVLGVHGPYGTGWELERARGRD----VLVV 102
Query: 175 ATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQ 233
A G G++P+R L+ + R + + GAR + +D ++W ++ + + +
Sbjct: 103 AGGIGLAPLRPLVLEVLAEPGRYGRISVLAGARTPADLIVRDDLEKWRTAYTGVT--VDR 160
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
PD +W G+ G V RA F+P T +CG + M ++ GV +++
Sbjct: 161 PDPDWDGDVGVVTRLLDRAP--FDPARTWAFVCGPEPMIRATARDLVHLGVPPQRV 214
>gi|50120360|ref|YP_049527.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Pectobacterium
atrosepticum SCRI1043]
gi|49610886|emb|CAG74331.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Pectobacterium atrosepticum SCRI1043]
Length = 319
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQYL L+ + + +IAS P S E +K V +++V L ++++
Sbjct: 121 GQYLDLKYQGITRS--YSIASIPQNNSK---IELHLKRVENGAMSSKVFGNLSANQLMQL 175
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G F + + ++ ATG+G +PI+S++ + + D+ +Y+G R
Sbjct: 176 EGPKGTFFYRNN----ESSGPIIFLATGTGFAPIKSIVTDLLNKGTQRDIYIYWGNRK-S 230
Query: 210 RMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ Y + WES + VK VLSQP+ W G GYVQ I + V CG
Sbjct: 231 SLFYDPSVELWESQHANVKCSLVLSQPEEGWDGRYGYVQEFV--VADIGDLNTASVYACG 288
Query: 268 QKQMAEEVTSIVLAEGV 284
+ M E ++++ +G+
Sbjct: 289 SQSMIESAKALLIEKGL 305
>gi|345298001|ref|YP_004827359.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
asburiae LF7a]
gi|345091938|gb|AEN63574.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
asburiae LF7a]
Length = 407
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GMMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 ---SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
SSK + + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG+
Sbjct: 296 KRLSSKRK--ISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGYTGF 353
Query: 245 VQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E I+
Sbjct: 354 IHNVLYEHYLKQHAAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|452959908|gb|EME65238.1| phenol hydroxylase [Rhodococcus ruber BKS 20-38]
Length = 344
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 113/260 (43%), Gaps = 37/260 (14%)
Query: 41 LATLAAAAVRQDTTVWTPTPLAEISPAA--ESLFHVSIDISDAPDIASSHTR-------- 90
LA A+ R D TV PL E +PA L + + + DIA R
Sbjct: 75 LALACQASPRTDLTV---APLNEAAPAGPRHPLRDHTGTVLELADIARCTRRLVVELDEP 131
Query: 91 ----AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKK 143
AGQY +L V G ++A+PP F S EF V+ V G A + L+
Sbjct: 132 MEFSAGQYAELIVPGSGVARQYSMANPP-FESRR--LEFHVRKVDGGLATEGWIFGSLRP 188
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
GD +E+ +G+ FA+ R P P +LI G+G++P++S++ S + LY+
Sbjct: 189 GDRIELRGPLGQ-FALVR---PQGEPAILI-GGGTGLAPLKSIVRHALSEDLVPGIDLYH 243
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
G R + D F+ E+ S + PVLS+ W G TG V + +G
Sbjct: 244 GGRGQADLYDVDFFRALEAADSRFRYHPVLSEE--QWDGATGMVTDVV--LDDFASCRGR 299
Query: 262 GVVLCGQKQMAEEVTSIVLA 281
LCG M VT+ V A
Sbjct: 300 SAYLCGPPAM---VTAAVKA 316
>gi|390952077|ref|YP_006415836.1| 2-polyprenylphenol 6-hydroxylase [Thiocystis violascens DSM 198]
gi|390428646|gb|AFL75711.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Thiocystis
violascens DSM 198]
Length = 337
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAF-EFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQYL+ + D G+ +IA+ P AF E V+ V G T V GL++ ++
Sbjct: 132 AGQYLEFVLSD-GRLRAFSIANAPH----DDAFIELHVRQVPGGEFTDFVFDGLREKAIL 186
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I +G + P +L+ G+G +P++ +IE + +RLY+G R+
Sbjct: 187 RIQGPLGSFVLREESARP-----MLLIGGGTGFAPLKGMIEHALHVGIQRSIRLYWGVRS 241
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAA 248
+ + + W + PVLS+PD +WSG TG+V A
Sbjct: 242 RRDLYLAELPATWSQRHPDFRFTPVLSEPDPDWSGRTGFVHEA 284
>gi|194290584|ref|YP_002006491.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus taiwanensis
LMG 19424]
gi|193224419|emb|CAQ70430.1| putative Ferredoxin--NAD(+) reductase [Cupriavidus taiwanensis LMG
19424]
Length = 352
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EDGPIELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + + P +++ A+G+G +PI++++E + + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESEAP-----IILLASGTGFAPIKAIVEHAAYTGIQRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R K + ++W VPV+S QP+ NW G TG+V A
Sbjct: 245 WGGRRPKDLYMHALAEQWARDLPNFSYVPVVSDAQPEDNWQGRTGFVHQA 294
>gi|149174242|ref|ZP_01852869.1| hypothetical protein PM8797T_02809 [Planctomyces maris DSM 8797]
gi|148846787|gb|EDL61123.1| hypothetical protein PM8797T_02809 [Planctomyces maris DSM 8797]
Length = 288
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 15/232 (6%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ EI+ + + ++DA S +GQ+ L + G+ S S +
Sbjct: 23 IREITAEVSGVATYQLALTDAAAAQSYRFESGQFNMLYLPGAGE-------SAISMSGDP 75
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
A E LV ++ AG+ + L+ GD + + G + + + + V++ A G
Sbjct: 76 AACETLVHTIRLAGNVTRGIAALEVGDTLGLRGPFGTSWPREACRGKN----VILVAGGI 131
Query: 179 GISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN 237
G+ P+R LI + KE + L YGAR + Y ++ W + G++I + +
Sbjct: 132 GLPPLRPLIYQLLAQRKEYGSLHLLYGARTPEMRVYTREYDRWRAGGLEIRETVDRSSTG 191
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W G G V R F+P T +++CG M L G++ E+I
Sbjct: 192 WRGNVGVVPQLLERLTG-FDPAQTILLICGPDLMMRFTARAALQRGMTGEQI 242
>gi|406822153|gb|AFS60544.1| phenol hydroxylase oxidoreductase subunit [Limnobacter sp. 2C4]
gi|406822173|gb|AFS60562.1| phenol hydroxylase oxidoreductase subunit [Limnobacter sp. 2A6]
Length = 352
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGD 145
H +AGQY+ L+V V +I + P + E ++ V G A L GD
Sbjct: 131 HFQAGQYVMLKVPGVQGERAFSIGNAP----GTNLVELHIRKVPGGAATTWLHDVLNLGD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E + +GR F P ++ A GSG+S +++IE F+ + L GA
Sbjct: 187 TLEFTAPLGRFFTRKSANLP-----MIFLAGGSGLSSPKAMIEDLFNEGCTLPITLVQGA 241
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNP--Q 259
RN + Y + F E + +P LS D W+G G+V A K FN +
Sbjct: 242 RNEAELYYHNYFVELAAKHPNFTYIPALSDADIGEGWTGAKGFVHEAL---KAHFNNDFR 298
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G +CG M E S ++
Sbjct: 299 GHKAYMCGPPPMIEACISTLM 319
>gi|386815683|ref|ZP_10102901.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thiothrix nivea
DSM 5205]
gi|386420259|gb|EIJ34094.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thiothrix nivea
DSM 5205]
Length = 257
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 23/244 (9%)
Query: 54 TVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVV---DVGKPTFLAI 110
T W + + P E L + ++ P +AGQ++ LR++ D G+ +A
Sbjct: 7 TSWHNAEVLQNHPWTERLLSLRLNAEPMP------FQAGQFVTLRLLVTLDNGETELVAK 60
Query: 111 ASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
+ A E V G + L L+ GD +EISQ F +D I PD P
Sbjct: 61 SYSLINAPHELTTEIFYNIVPNGKLSNALARLRPGDQLEISQPAKGFFVLDEI--PD-VP 117
Query: 170 TVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQD---KFKEWESSGVK 226
+ +FATG+G+ P S++++ + + + L +G ++ +AY D F + +
Sbjct: 118 NLWLFATGTGLGPYLSILKTEAAWERFRHITLVHGVPLMEELAYADLIQSFADQHPGQFR 177
Query: 227 IVPVLSQPDGNWSGETGYVQAAFS------RAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
+ +++ + N G G + F+ A +P+ T V+LCG M E+ ++
Sbjct: 178 FISCVTR-EPNPQGLAGRITTNFAFGTLEEAAGVTISPENTHVMLCGNHNMLNEMKELLG 236
Query: 281 AEGV 284
G+
Sbjct: 237 QRGL 240
>gi|372278654|ref|ZP_09514690.1| Na(+)-translocating NADH-quinone reductase subunit F [Oceanicola
sp. S124]
Length = 407
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 241 GQMSSYIFNLKPGDKVTISGPFGEFFARDTKK------EMVFVGGGAGMAPMRSHIFDQL 294
Query: 192 SSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
E D + +YGAR+ + M + + F +E+++ + + PD NW G TG++
Sbjct: 295 KRLENRDRKISFWYGARSKREMFFVEDFDQLAEEFDNFEWHVALSDALPDDNWGGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M + V +++L GV E I+
Sbjct: 355 HNVLFEEYLKNHPNPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIM 401
>gi|134287838|ref|YP_001110003.1| oxidoreductase FAD-binding subunit [Burkholderia vietnamiensis G4]
gi|12746252|gb|AAK07413.1|AF319657_6 TomA5 [Burkholderia cepacia]
gi|17979889|gb|AAL50375.1|AF349675_6 TomA5 [Burkholderia cepacia]
gi|134132488|gb|ABO60471.1| Oxidoreductase FAD-binding domain protein [Burkholderia
vietnamiensis G4]
Length = 354
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 37 QRRRLATLAAAAVRQDTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIASS------ 87
+ R A A + DTT+ P AE+ P + V+ P I +
Sbjct: 69 REERKALACCATLLDDTTIEADIEEDPDAEVIPVEDFNAEVTRIEQLTPTIKAVFLRLDQ 128
Query: 88 --HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKK 143
H +AGQY+QL + ++ + +IA+ P+ +A+G E ++ V G T + L
Sbjct: 129 PIHFQAGQYVQLEIPELRQTRAFSIANSPADVAATGEIELNIRRVPGGQGTGYIHEQLAV 188
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
G+++ ++ GR F P ++ A GSG+S RS+I S + L Y
Sbjct: 189 GNILHVTGPYGRFFVRRSADQP-----MVFMAGGSGLSSPRSMILDLLQSGWSKPITLIY 243
Query: 204 GARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSR--AKKIF--N 257
G RN + Y ++F+E S VP LS+ G T + F AK F N
Sbjct: 244 GQRNEAELYYDEEFRELGQRYSNFSYVPALSE---KAEGATHPLAQGFVHEVAKAHFENN 300
Query: 258 PQGTGVVLCGQKQMAEEVTSIVL 280
G LCG M + + ++
Sbjct: 301 FSGHKAYLCGPPAMIDACVTTLI 323
>gi|121608731|ref|YP_996538.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Verminephrobacter
eiseniae EF01-2]
gi|121553371|gb|ABM57520.1| oxidoreductase FAD/NAD(P)-binding domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 350
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLC 139
P S AGQYL+ + D + + ++A+ P + + E ++ +AG T V
Sbjct: 130 PAADSLRYHAGQYLEFILRDGARRAY-SMANAPHTQTDAPGVELHIRHMAGGKFTDHVFG 188
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERSD 198
LK+ D++ + G F + P +++ A+G+G +PI+++IE F+ R
Sbjct: 189 ALKEKDILRVEGPFGSFFLREDCDKP-----IVLLASGTGFAPIKAIIEHLQFTGSTRRA 243
Query: 199 VRLYYGARNLKRMAYQD--KFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKK 254
V LY+G R + D + + E + VPVLS P+ WSG TG+V A
Sbjct: 244 V-LYWGGRRPSDLYLYDWVQARVAEMPHLSCVPVLSDALPEDGWSGRTGFVHQAV--LDD 300
Query: 255 IFNPQGTGVVLCGQKQMAE 273
+ G V CG M +
Sbjct: 301 FADLSGHQVYACGAPVMVD 319
>gi|149927314|ref|ZP_01915570.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Limnobacter sp. MED105]
gi|149824028|gb|EDM83251.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Limnobacter sp. MED105]
Length = 352
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGD 145
H +AGQY+ L+V V +I + P + E ++ V G A L GD
Sbjct: 131 HFQAGQYVMLKVPGVQGERAFSIGNAP----GTNLVELHIRKVPGGAATTWLHDVLNLGD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E + +GR F P ++ A GSG+S +++IE F+ + L GA
Sbjct: 187 TLEFTAPLGRFFTRKSANLP-----MIFLAGGSGLSSPKAMIEELFNEGCTLPITLVQGA 241
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNP--Q 259
RN + Y + F E + +P LS D W+G G+V A K FN +
Sbjct: 242 RNEAELYYHNYFVELAAKHPNFTYIPALSDADIGEGWTGAKGFVHEAL---KAHFNNDFR 298
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G +CG M E S ++
Sbjct: 299 GHKAYMCGPPPMIEACISTLM 319
>gi|206890961|ref|YP_002249642.1| NiFe hydrogenase gamma subunit [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206742899|gb|ACI21956.1| NiFe hydrogenase gamma subunit [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 278
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 13/204 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ++ + ++ +G+ +SP + FE V++V G L L GD++ +
Sbjct: 46 GQFIMVSLMGIGEIPVSICSSPLN----RHYFEICVRAV-GKVTNSLHKLNVGDIIGVRG 100
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKR 210
G GF + I+ D +LI A G G++P+RSLI + ++ ++ + +G +
Sbjct: 101 PYGNGFPIKIIEGHD----LLIIAGGLGLAPLRSLILYAIDNRRDFGEIHILFGCKTPGE 156
Query: 211 MAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ ++D+ +EW + + + + D +W G G + + +P T + G
Sbjct: 157 LLFEDEIEEWGKRLDIHFACTVDRADPDWKGNVGLITSLIPGVD--IDPLRTYAAVVGPP 214
Query: 270 QMAEEVTSIVLAEGVSSEKILKNF 293
M + V +LA+G+ ++IL +F
Sbjct: 215 VMYKFVIKELLAKGLPVDQILLSF 238
>gi|374614140|ref|ZP_09686875.1| oxidoreductase FAD/NAD(P)-binding domain protein [Mycobacterium
tusciae JS617]
gi|373544797|gb|EHP71687.1| oxidoreductase FAD/NAD(P)-binding domain protein [Mycobacterium
tusciae JS617]
Length = 343
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 92 GQYLQLRV--VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
GQY++++V D +F ++A+PPS +S +V+ + T++V + +G +
Sbjct: 142 GQYIEVQVPGSDDEWRSF-SMANPPSISSR---VHLMVRVIPNGRFTSQVGKEIAEGTKM 197
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G+ FA+ R+ Y ++ A GSGI+P+ S++ S +YGAR
Sbjct: 198 NLRGPLGQ-FAI-RLS----YRPIIFVAGGSGIAPVLSMLADLIESNNERPATFFYGART 251
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + DK +E E +P LS PDG W GETG + SR + +G
Sbjct: 252 VADLPMVDKLRELEREHDWFTFIPALSDPDGTPWDGETGLITEVVSR--HFPSTKGHESY 309
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
LCG M + ++ + G I
Sbjct: 310 LCGPPAMIDAALDVLTSSGCKDRHIF 335
>gi|406822163|gb|AFS60553.1| phenol hydroxylase oxidoreductase subunit [Limnobacter sp. CR2A4]
Length = 352
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGD 145
H +AGQY+ L+V V +I + P + E ++ V G A L GD
Sbjct: 131 HFQAGQYVMLKVPGVQGERAFSIGNAP----GTNLVELHIRKVPGGAATTWLHDELNLGD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E + +GR F P ++ A GSG+S +++IE F+ + L GA
Sbjct: 187 TLEFTAPLGRFFTRKSANLP-----MIFLAGGSGLSSPKAMIEELFNDGCTLPITLVQGA 241
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNP--Q 259
RN + Y + F E + +P LS D W+G G+V A K FN +
Sbjct: 242 RNEAELYYHNYFVELAAKHPNFTYIPALSDADIGEGWTGAKGFVHEAL---KAHFNNDFR 298
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G +CG M E S ++
Sbjct: 299 GHKAYMCGPPPMIEACISTLM 319
>gi|189423936|ref|YP_001951113.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Geobacter lovleyi SZ]
gi|189420195|gb|ACD94593.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter lovleyi
SZ]
Length = 281
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF +SP + G E ++V G E L L+ GD + +
Sbjct: 45 RAGQFAEYSAFGAGESTFCIASSP----TRKGYIECCFRAV-GRVTESLRRLEVGDTMGV 99
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGS-GISPIRSLIESGFSSKER-SDVRLYYGARN 207
G F +++ + L+F TG + P+R+LI + +++ D+ + YGAR
Sbjct: 100 RGPYGNSFPIEQF-----FGKSLLFVTGGIALPPLRTLIWNCLDWRDKFGDITIVYGART 154
Query: 208 LKRMAYQDKFKEWES-SGVKIVPVLSQPDGN---WSGETGYV 245
+ Y+ + KEWE S V++V + P GN W G+ G+V
Sbjct: 155 EADLVYKRELKEWEERSDVRLVKTV-DPGGNGPEWDGKVGFV 195
>gi|73542407|ref|YP_296927.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia eutropha
JMP134]
gi|72119820|gb|AAZ62083.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase
FAD-binding region [Ralstonia eutropha JMP134]
Length = 354
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EDGPIELHIRHMPGGAFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI++++E + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESTAP-----MILLASGTGFAPIKAIVEHAAYTGITRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R K + ++W K VPV+S P+ NWSG TG+V A
Sbjct: 245 WGGRRPKDLYMHALCEQWARDLPNFKYVPVISDALPEDNWSGRTGFVHQA 294
>gi|383937038|ref|ZP_09990452.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Rheinheimera nanhaiensis E407-8]
gi|383701884|dbj|GAB60543.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Rheinheimera nanhaiensis E407-8]
Length = 615
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-- 189
G + L L+ GD VE +A P T+++ GSG++P+++LIE
Sbjct: 447 GIGSNYLGNLRIGDRVEALGPFEEFYA-----SPGSDKTMVLVGAGSGMAPLKALIEEQL 501
Query: 190 GFSSKERSD-----VRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGET 242
+ D + +YGARN + Y D F E + PVLS+PD W G T
Sbjct: 502 ALHRNNKGDKPPRPLHFFYGARNENDVIYVDYFYELAKQYPHFHYYPVLSRPDKGWLGAT 561
Query: 243 GYVQAAFSRAKKIFNPQGT-GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
GY Q + + QG LCG K + ++ ++ +GV I
Sbjct: 562 GYAQHVLALNWQNVVEQGEPEFYLCGPKGLMDDTIRLLRDKGVPESNI 609
>gi|300312956|ref|YP_003777048.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Herbaspirillum seropedicae SmR1]
gi|300075741|gb|ADJ65140.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
protein [Herbaspirillum seropedicae SmR1]
Length = 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 54 TVWTPTPLAE-ISPAAESLFHVSIDISDAPDIASSHTR--------AGQYLQLRVVDVGK 104
TV +P P A+ + ESL APD+A R AGQY+ L + D +
Sbjct: 113 TVASPAPAAQQVQATLESLTRA------APDVAILRLRCAAPLSYRAGQYIDLLLEDGQR 166
Query: 105 PTFLAIASPPSFA-SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDR 161
++ S ++A S E V+ + G T + G++ G + G F +
Sbjct: 167 RSY----SMATYAKDGSDLLELHVRHLPGGLFTDRLFNGMQPGQQFSLEGPAGSFFMREG 222
Query: 162 IQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWE 221
QP +++ A+G+G +P+++L+E +S +RLY+G R + ++W
Sbjct: 223 TQP------LILLASGTGFAPVKALVEEAIASGSTRAMRLYWGGRRAADLYLDALCRDWA 276
Query: 222 SS--GVKIVPVLSQPDG--NWSGETGYVQAA 248
+S VPVLS+ D WSG TG V A
Sbjct: 277 ASLPWFDYVPVLSEADATSGWSGRTGLVHRA 307
>gi|299065970|emb|CBJ37151.1| putative Ferredoxin--NAD(+) reductase [Ralstonia solanacearum
CMR15]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPAELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAAFVGIQRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + +EW + G + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPHDLYMHALAEEWARTLPGFRYVPVISDAQPEDGWTGRTGFVHQA 294
>gi|110597812|ref|ZP_01386095.1| Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
[Chlorobium ferrooxidans DSM 13031]
gi|110340537|gb|EAT59020.1| Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
[Chlorobium ferrooxidans DSM 13031]
Length = 325
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF I I D + A R GQ+L L + G+ P S +S+S EFL
Sbjct: 72 EKLFQ--IRIIDPVERALFRFRPGQFLMLELPGYGE-------VPISISSSSTNHEFLEL 122
Query: 129 SV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
+ AGS L +G V I G F +D + + VL+ A G GI+P+R+
Sbjct: 123 CIRKAGSVTTALFNAGEGARVAIRGPFGSSFPMDEMAGHN----VLLIAGGLGIAPLRAP 178
Query: 187 IESGFSSKERS-DVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGY 244
+ + R DV L YGA++ ++ + +F EW+ S + + ++ W+G+TG
Sbjct: 179 LFWINEHRNRFLDVSLLYGAKDPSQLLFTWQFNEWDMISHIGLHTIVEHGSEEWTGKTGM 238
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ F+ +P T ++CG M + V + G+ ++
Sbjct: 239 ITDLFNDIS--IDPATTYAIVCGPPVMFKFVCGWLDGLGIPMNRMF 282
>gi|149914367|ref|ZP_01902898.1| oxidoreductase FAD/NAD(P)-binding domain protein [Roseobacter sp.
AzwK-3b]
gi|149811886|gb|EDM71719.1| oxidoreductase FAD/NAD(P)-binding domain protein [Roseobacter sp.
AzwK-3b]
Length = 440
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + ++PAA + + + A + RAGQ+ L +G+P F +P S A
Sbjct: 207 PWRVLSVTPAARRTWRLRLTPEGAHRL---RYRAGQFAWL---TIGRPPFSLNDNPFSIA 260
Query: 118 SASGA---FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
SA EF++K + G + + + G V + G + ++ P + +
Sbjct: 261 SAPSRGPDLEFIIKQL-GDMTDRIGQIPPGTRVYVDGPHGH----LTLTGQEDAPGIALI 315
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQ 233
A G GI+P+ L+ + + L YG R ++ +D+ + G K++ VLS+
Sbjct: 316 AGGVGIAPLLGLLREMAARGDPRPSLLIYGNRIPGQIVCEDELQALARDHGTKVIHVLSE 375
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGV-VLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
P WSGETG+V A R + + V+CG M V + +L GV + +IL
Sbjct: 376 PPKGWSGETGFVDARMLRRHVAEAGRRDWLFVVCGPPPMLRTVEAALLELGVPARRILSE 435
>gi|406822183|gb|AFS60571.1| phenol hydroxylase oxidoreductase subunit [Limnobacter sp. 2D3]
Length = 352
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 20/201 (9%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGD 145
H +AGQY+ L+V V +I + P + E ++ V G A L GD
Sbjct: 131 HFQAGQYVMLKVPGVQGERAFSIGNAP----GTNLVELHIRKVPGGAATTWLHDELNLGD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E + +GR F P ++ A GSG+S +++IE F+ + L GA
Sbjct: 187 TLEFTAPLGRFFTRKSANLP-----MIFLAGGSGLSSPKAMIEELFNEGCTLPITLVQGA 241
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNP--Q 259
RN + Y + F + + +P LS D +W+G G+V A K FN +
Sbjct: 242 RNEAELYYHNYFTGLAAKHANFTYIPALSDTDVSASWTGAKGFVHEAL---KTHFNNDFR 298
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G +CG M E S ++
Sbjct: 299 GHKAYMCGPPPMIEACISTLM 319
>gi|334702536|ref|ZP_08518402.1| FMN reductase [Aeromonas caviae Ae398]
Length = 232
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 63 EISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA 122
E+ ++++HV++ AP S + GQYL + + D K F +IA+ P+ SG
Sbjct: 10 ELREYVDTIWHVAL----APQQEVSF-KPGQYLLVVMSDSDKRPF-SIANSPT---RSGV 60
Query: 123 FEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
E + + +VL +++ +E+ G+ F D P +++ A G+G
Sbjct: 61 LELQIGATPENAYAGQVLARMREQGEIEVELAAGKAFLRDESPRP-----LILMAGGTGF 115
Query: 181 SPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDGNW 238
S R+++E S + V LY+G R + ++ ++WE + +PV+ +P+ +W
Sbjct: 116 SYARAILEYLIGSGSKRPVFLYWGVRQAHWLYELEQMQQWERDYAPLTFIPVVQEPESDW 175
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+G TG V A + + + G+ +MA G E+I +
Sbjct: 176 TGRTGLVHKAI--MDDFVSLHDYDIYVAGRFEMAGAAREEFKVLGAEPERIFGD 227
>gi|388545926|ref|ZP_10149205.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Pseudomonas sp. M47T1]
gi|388276043|gb|EIK95626.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Pseudomonas sp. M47T1]
Length = 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + I+ AE++ V + + P + H GQYL + +G+ S +
Sbjct: 101 PCRIDTITRLAENVVEVVLRV---PPTSKLHYLPGQYLDV----IGEGGLRRSYSIANAQ 153
Query: 118 SASGAFEFLVKSVA-GSTAEVLCGLKK-GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
A G E ++ V GS ++ G K D++ + +G D+ T++ A
Sbjct: 154 RADGKLELQIREVEQGSMSQYWFGSAKPNDLLRLEGPLGTFCLRDK-----SASTLVFLA 208
Query: 176 TGSGISPIRSLIESGFSS---KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
TG+GI+P+++++E S+ E ++R+Y+G R + + + +S +PVLS
Sbjct: 209 TGTGIAPVKAILEQLLSTPKLAEGKNIRIYWGGRTAADIYWTPQLDGLSAS---FIPVLS 265
Query: 233 QPDGNWSGETGYVQAAF 249
+ +W G TGYVQAA
Sbjct: 266 RASADWQGRTGYVQAAL 282
>gi|336288372|gb|AEI30510.1| oxidoreductase FAD/NAD(P)-binding subunit [uncultured
microorganism]
Length = 340
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAF-EFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY+++ + D GK ++A+ P AF + ++ V G T V +++ ++
Sbjct: 134 AGQYVEILLKD-GKRRAFSLANAPH----DDAFLQLHIRHVPGGEFTGYVFGEMQEKTIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F ++ + P VL+ A+G+G +PI+S++E F ++ + + LY+GAR
Sbjct: 189 RFQGSFGTFF----LREDSDKPIVLV-ASGTGFAPIKSILEHAFHNRHQRTMTLYWGART 243
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ + D ++W + + VPV+S+ P +W G TG+V A
Sbjct: 244 PRDLYLADLPRQWAHQHANFTYVPVVSEPPPGDSWQGRTGFVHQA 288
>gi|110672108|gb|ABG82171.1| BtxF [Ralstonia sp. PHS1]
Length = 354
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 37 QRRRLATLAAAAVRQDTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIASS------ 87
+ R A A + DTT+ P AE+ P + V+ P I +
Sbjct: 69 REERKALACCATLLDDTTIEADIEEDPDAEVIPVEDFNAEVTRIEQLTPTIKAVFLRLDQ 128
Query: 88 --HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKK 143
H +AGQY+QL + ++ + +IA+ P+ +A+G E ++ V G T + L
Sbjct: 129 PIHFQAGQYVQLEIPELRQTRAFSIANSPADVAATGEIELNIRRVPGGQGTGYIHEQLAV 188
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
G+++ ++ GR F P ++ A GSG+S RS+I S + L Y
Sbjct: 189 GNILHVTGPYGRFFVRRSADQP-----MVFMAGGSGLSSPRSMIIDLLQSGWSRPITLVY 243
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSR--AKKIF--N 257
G RN + Y ++F+E S VP LS+ G T + F AK F N
Sbjct: 244 GQRNEAELYYDEEFRELSQRYSNFSYVPALSE---KAEGATHPLAQGFVHEVAKAHFGNN 300
Query: 258 PQGTGVVLCGQKQMAEEVTSIVL 280
G LCG M + + ++
Sbjct: 301 FSGHKAYLCGPPAMIDACVTTLI 323
>gi|75993180|gb|ABA33701.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase
FAD-binding region [Burkholderia cepacia]
Length = 354
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 27/263 (10%)
Query: 37 QRRRLATLAAAAVRQDTTVWT---PTPLAEISPAAESLFHVSIDISDAPDIASS------ 87
+ R A A + DTT+ P AE+ P + V+ P I +
Sbjct: 69 REERKALACCATLLDDTTIEADIEEDPDAEVIPVEDFNAEVTRIEQLTPTIKAVFLRLDQ 128
Query: 88 --HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKK 143
H +AGQY+QL + ++ + +IA+ P+ +A+G E ++ V G T + L
Sbjct: 129 PIHFQAGQYVQLEIPELRQTRAFSIANSPADVAATGEIELNIRRVPGGQGTGYIHEQLAV 188
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
G+++ ++ GR F P ++ A GSG+S RS++ S + L Y
Sbjct: 189 GNILHVTGPYGRFFVRRSADQP-----MVFMAGGSGLSSPRSMVLDLLQSGWSKPITLVY 243
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSR--AKKIF--N 257
G RN + Y ++F+E S VP LS+ G T + F AK F N
Sbjct: 244 GQRNEAELYYDEEFRELSQRYSNFSYVPALSE---KAEGATHPLAQGFVHEVAKAHFQNN 300
Query: 258 PQGTGVVLCGQKQMAEEVTSIVL 280
G LCG M + + ++
Sbjct: 301 FSGHKAYLCGPPAMIDACVTTLI 323
>gi|354722195|ref|ZP_09036410.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
mori LMG 25706]
Length = 407
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 ---SSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
SSK + + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG+
Sbjct: 296 KRLSSKRK--ISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K+ P+ +CG M V ++ GV E I+
Sbjct: 354 IHNVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|144900806|emb|CAM77670.1| Oxidoreductase FAD/NAD(P)-binding [Magnetospirillum gryphiswaldense
MSR-1]
Length = 278
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 60 PLAEISPAAESLFHVSIDISDA------PDIASSHT-RAGQYLQLRVVDVGKPTFLAIAS 112
P + P + V D+SD P+ T R GQ+ L V VG+ ++I+
Sbjct: 5 PHDPMVPVPFRIEKVRRDLSDTFTMEMVPEAGGDFTFRPGQFNMLYVFGVGEVP-ISISG 63
Query: 113 PPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
P+ S LV + G+ E L LK GDV+ + G + V+ D
Sbjct: 64 DPADRSV------LVHTTRAVGTVTEALDALKPGDVLGVRGPFGTAWPVEATFGHD---- 113
Query: 171 VLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESS-GVKIV 228
++ A G G++P+R I + +ER V + YGAR + + Y+ + + W + ++
Sbjct: 114 LVFVAGGVGLAPLRPAIYQAMAHRERFGRVIVLYGARTPEDILYKKELERWRGRFDLDVL 173
Query: 229 PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+ + G W G G V +R F+P T +CG + M + + +GVS +
Sbjct: 174 VTVDRATGKWGGNVGVVTNLVTRGG--FDPLNTASFVCGPEVMMRYAAAALEKKGVSRDN 231
Query: 289 I 289
I
Sbjct: 232 I 232
>gi|146341272|ref|YP_001206320.1| ferredoxin--NAD(+) reductase phenol hydroxylase [Bradyrhizobium sp.
ORS 278]
gi|146194078|emb|CAL78096.1| putative Ferredoxin--NAD(+) reductase; putative phenol hydroxylase
(Phenol 2-monooxygenase P5 component) [Bradyrhizobium
sp. ORS 278]
Length = 356
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVE 148
AGQY+ L + D ++A+ P + F++K ++++ GL G VV
Sbjct: 149 AGQYVDLTIDDGRITRAFSMANAPGEGTR---LSFIIKKYPNGAFSSQLDGGLDVGSVVL 205
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + P +L+ GSG+SP+ S++ +S E+ +R +YGAR+
Sbjct: 206 AKGPYGTCFRREERPGP-----MLLIGGGSGMSPLWSILADHIASGEQRPIRFFYGARSR 260
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + D+ E + + VP LS + +W GETG+V +R K + GV+
Sbjct: 261 ADLFHLDELAAIGRELADFRFVPALSHATDEDHWDGETGFVHEVVARHLK--QERLAGVI 318
Query: 265 ---LCGQKQMAEEVTSIVLAEGVSSEKI 289
CG QM + V ++ GV + I
Sbjct: 319 DAYACGPTQMIDAVLPVLQINGVEPDHI 346
>gi|300786209|ref|YP_003766500.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei U32]
gi|384149525|ref|YP_005532341.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei S699]
gi|399538092|ref|YP_006550754.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei S699]
gi|299795723|gb|ADJ46098.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei U32]
gi|340527679|gb|AEK42884.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei S699]
gi|398318862|gb|AFO77809.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis
mediterranei S699]
Length = 342
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 172 LIF-ATGSGISPI----RSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--G 224
L+F G+G++PI RS+ E G K YYGAR + + ++ + +E E+ G
Sbjct: 212 LVFVGGGAGMAPILALLRSMAERGLDRK----ATFYYGARRRRDLCFEAELRELEAKLPG 267
Query: 225 VKIVPVLSQP-DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
+ VP LS+P D +W+GETG+V +A + G +CG M E ++ A G
Sbjct: 268 FRYVPALSEPGDDDWTGETGFVTDVLRQAG--LDLTGADAYVCGPPPMVEAALELLPALG 325
Query: 284 VSSEKILKN 292
V +++ +
Sbjct: 326 VDGKRVFYD 334
>gi|395497559|ref|ZP_10429138.1| Oxidoreductase FAD-binding subunit [Pseudomonas sp. PAMC 25886]
Length = 556
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
R GQYL+ R+ D G ++A+ P A G F ++ V+G + +L L+ GD +
Sbjct: 131 RPGQYLRFRLDD-GDSRCFSVANLP--AQEHGRLVFHIRQVSGGVFSERILSTLQAGDAL 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G Q DE P VL FATG+G + ++ L+ + + + ++V LY+G +
Sbjct: 188 KLEGPVG----ACTWQHEDERPVVL-FATGTGYAGVKPLLLTALARQ--AEVTLYWG-NS 239
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKI-----FNPQGTG 262
Y +F EW S + P NW VQAA +R +++ N +
Sbjct: 240 APADFYDAEFLEWASE--------AHPRFNWH----RVQAADARVQQVALAQPHNWADSQ 287
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ CG M +V LA G + + +
Sbjct: 288 IYACGNSTMINQVRETCLAAGAQAHRFV 315
>gi|256823803|ref|YP_003147766.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Kangiella koreensis DSM 16069]
gi|256797342|gb|ACV27998.1| oxidoreductase FAD/NAD(P)-binding domain protein [Kangiella
koreensis DSM 16069]
Length = 249
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA--EVLCGLKKGDVVE 148
AGQYL L + D G +IAS P E ++ + G A +++ LK ++V
Sbjct: 45 AGQYLMLELDD-GSMCPFSIASSP----LQDVLELHIRRLPGHDAADKIVSQLKHRNLVR 99
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G D E P V I A G+G +P S+I++ + ++ + LY+GA+
Sbjct: 100 LQMPYGECVLTDS-----ERPAVFI-AGGTGFAPFHSIIKTALKNGDQRALTLYWGAQTS 153
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ ++ + W E +PVLS D W G G+V AF + + +
Sbjct: 154 ADLYLLEEPQAWAEEFDHFTFIPVLSGLDEKWQGRKGFVHHAFMLDHD--DLTNMDIYVG 211
Query: 267 GQKQMAEEVTSIVLAEGVSSEKI 289
G + MA V +L GV I
Sbjct: 212 GSEPMAMSVYQDLLDRGVKKSSI 234
>gi|218885431|ref|YP_002434752.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756385|gb|ACL07284.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 295
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+PA ++L + I D + + GQ QL + VG+ TF+ I SPP+ +
Sbjct: 39 TPAIKTL---RVRIDDPARMEAFRFNPGQVGQLSLFGVGESTFV-INSPPT------RMD 88
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+L S+ AG L GLK GD V + +G F ++ ++ D ++ G G++P
Sbjct: 89 YLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPIEDMRGKD----IVFVGGGIGMAP 144
Query: 183 IRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSG 240
+R+L+ ++ + ++ L YGAR MA++D +EW S ++ + Q +W
Sbjct: 145 LRTLLLYMLDNRADYGNITLLYGARTPNDMAFRDDVQEWLGRSDMQTTLTVDQAPEDWPH 204
Query: 241 ETGYV 245
G +
Sbjct: 205 RAGLI 209
>gi|448240654|ref|YP_007404707.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
marcescens WW4]
gi|445211018|gb|AGE16688.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
marcescens WW4]
gi|453066049|gb|EMF07005.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
marcescens VGH107]
Length = 407
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y+D F + ++ ++ QP+ NW+G TG++
Sbjct: 296 KRLNSKRKITFWYGARSLREMFYEDDFNQLQAENDNFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|255318495|ref|ZP_05359728.1| phenol hydroxylase P5 protein [Acinetobacter radioresistens SK82]
gi|262378724|ref|ZP_06071881.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Acinetobacter radioresistens SH164]
gi|255304487|gb|EET83671.1| phenol hydroxylase P5 protein [Acinetobacter radioresistens SK82]
gi|262300009|gb|EEY87921.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Acinetobacter radioresistens SH164]
Length = 353
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVV 147
+AGQY+ L++ ++ +IA+PP S G E ++ V G TA L+ GD +
Sbjct: 133 QAGQYINLQLPNIEGTRAFSIANPP---SEEGIIELHIRQVLGGTATTYVHETLQAGDEL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++S G+ F ++ DE + I A GSG+S +S+I + + L+ GAR+
Sbjct: 190 QVSGPYGQFF----VRKSDEKDAIFI-AGGSGLSSPQSMILDLLEQGDTRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + ++ F+ + + +P L+ P + W+G TG+V A + F + +G
Sbjct: 245 VSELYNREVFETLVKDYPNFRYIPALNAPKTEDQWTGFTGFVHEAVA---DYFENKCSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPPMIDAAISTLM 320
>gi|357040512|ref|ZP_09102299.1| sulfite reductase, subunit B [Desulfotomaculum gibsoniae DSM 7213]
gi|355356603|gb|EHG04389.1| sulfite reductase, subunit B [Desulfotomaculum gibsoniae DSM 7213]
Length = 260
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
+GQ++++ + VG+ P S + G FE ++ V G VL LK GDV+ +
Sbjct: 36 SGQFVEVSLPKVGE-------CPISVSDFGEGWFEMTIRRV-GKVTNVLHQLKVGDVIFV 87
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G GF +D+ + + V++ A G+G++P++S++ S+E + L G ++
Sbjct: 88 RGPYGNGFLMDKYRGKE----VVVAAGGTGLAPVKSMLN---RSREYGGLTLLAGFKSPA 140
Query: 210 RMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ + D+ K WE ++ + + D NW G G + + ++ ++ P V++ G
Sbjct: 141 DVLFPDQLKMWEQD-FNVILTVDRGDDNWHGNVGLI-TQYVKSLQLAKPDEVEVIVVGPP 198
Query: 270 QMAEEVTSIVLAEGVSSEKILKNF 293
M + L GV + I +F
Sbjct: 199 LMMKFTVQEFLGLGVPEKNITVSF 222
>gi|392554524|ref|ZP_10301661.1| ferredoxin--NADP reductase [Pseudoalteromonas undina NCIMB 2128]
Length = 247
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + + ESLF +++ P +AGQ+ +L ++D K IA S
Sbjct: 4 WIDATIKSVKWWNESLFSITVHADVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A S EF L+ V G + L LK GD V I + F +D + P E +
Sbjct: 54 YVNAPQSPDLEFYLINVVDGLLSSHLATLKPGDTVLIERRATGFFTLDEV-PASE--QLW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVKIVP 229
+ +TG+ I P S+++ ++ + L +G R ++YQ +K + S + +P
Sbjct: 111 MLSTGTAIGPFLSMLQQSEVWEKYKHINLVHGVRQNSDLSYQELINKLIKSHPSQLNYIP 170
Query: 230 VLSQ--PDGNWSGETGYV---QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
V+S+ P +G V A + P+ +LCG QM ++ T ++L +
Sbjct: 171 VVSREVPLQGLAGRITTVIENNALYEHVGLCATPKNAQFMLCGNPQMVKDTTELLLTQNY 230
Query: 285 SSEK 288
+
Sbjct: 231 KRNR 234
>gi|425901376|ref|ZP_18877967.1| oxidoreductase, FAD/NAD-binding domains/2Fe-2S iron-sulfur cluster
binding domain protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883133|gb|EJK99619.1| oxidoreductase, FAD/NAD-binding domains/2Fe-2S iron-sulfur cluster
binding domain protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 343
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 91 AGQYLQLRV-VDVGKPT-FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
AGQYL L V VD K +I+S P VK VAG + ++ L GD
Sbjct: 36 AGQYLTLEVDVDGAKGCRAYSISSTPGLDKT---LSITVKRVAGGKVSNRLVQELSAGDA 92
Query: 147 VEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
V+ GR FA P +++ A GSGI+PI S+++S + + V L YG
Sbjct: 93 VQTLGTHGRFTFAPQ----PGRGRHLVLLAAGSGITPIFSILKSALHFEPDAQVSLIYGN 148
Query: 206 RNLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQGT 261
RN + + ++DK + + +++V VLS+PD + E Q + PQ
Sbjct: 149 RNQESVIFRDKLDQLRQTFGERLQLVHVLSRPDTPGAHEGRLTRQRVIDILGALPGPQAR 208
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M +EVT+ + A G++ E +
Sbjct: 209 EYYSCGPSGMMDEVTAALEALGIAPESV 236
>gi|284040029|ref|YP_003389959.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Spirosoma linguale DSM 74]
gi|283819322|gb|ADB41160.1| oxidoreductase FAD/NAD(P)-binding domain protein [Spirosoma
linguale DSM 74]
Length = 356
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 127 VKSVAGSTA-EVLCG-LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
VK V G A LC +K GD++E + MG V +++P VLI A GSGI+P+
Sbjct: 71 VKRVPGGLASNYLCDRIKPGDIIESLEPMGT--FVPKLEPQGRRTLVLIGA-GSGITPLF 127
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES----SGVKIVPVLSQPDGNWSG 240
S+ +S + S + L YG RN + Y+ E S ++ VLSQP W+G
Sbjct: 128 SMAKSTLHVEPNSRIWLIYGNRNQSSIIYKAHLDAMEQAYGKSRFQVTHVLSQPSYGWTG 187
Query: 241 ETGYVQAAFSRAKKIFNP------QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
G + K+F+ Q +CG M E S + GVS+E++ K
Sbjct: 188 AEGRLNQ--HSLTKLFDQLSQAELQNASFYMCGPDGMMAEARSALSLVGVSAERVHK 242
>gi|357416557|ref|YP_004929577.1| FadD27 protein [Pseudoxanthomonas spadix BD-a59]
gi|355334135|gb|AER55536.1| FAD/NAD(P)-binding oxidoreductase subunit [Pseudoxanthomonas spadix
BD-a59]
Length = 354
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGD 145
H +AGQY+Q+ + V +IA+ P+ A+G E V+ V T + LK GD
Sbjct: 131 HFQAGQYVQVVIPGVQGARAFSIANSPAQVKATGEIELNVRIVNDGAGTTWLHQQLKAGD 190
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+ IS GR F P V+ A GSG+S RS+I + + L YG
Sbjct: 191 HLLISGPYGRFFVRKSATSP-----VIFMAGGSGLSSPRSMILDLLDAGSTPPITLIYGQ 245
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIF--NPQ 259
R + + Y +F+ E VP LS W+G G+V AK F N
Sbjct: 246 RAAEELYYDAEFRALAAEHPDFTYVPALSNEGEGSTWAGARGFVHEV---AKTHFAGNFS 302
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G LCG M E + ++
Sbjct: 303 GNKAYLCGPPAMIEACIATLM 323
>gi|401762422|ref|YP_006577429.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400173956|gb|AFP68805.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 407
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I F
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHI---F 292
Query: 192 SSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETG 243
+R + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG
Sbjct: 293 DQLKRLGSTRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGYTG 352
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + K+ P+ +CG M V ++ GV E IL
Sbjct: 353 FIHNVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIL 401
>gi|347541221|ref|YP_004848647.1| oxidoreductase FAD/NAD(P)-binding domain containing protein
[Pseudogulbenkiania sp. NH8B]
gi|345644400|dbj|BAK78233.1| oxidoreductase FAD/NAD(P)-binding domain protein
[Pseudogulbenkiania sp. NH8B]
Length = 342
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAE-VLCGLKKGDVV 147
AGQY+ + + D GK +IA+ P E ++ GS +E V +K+ +++
Sbjct: 132 HAGQYIDILMKD-GKKRSFSIANAPH---DDAFLELHIRHQPGGSFSEYVFTQMKEREIM 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+G F ++ + P V + A+G+G +PI+ ++E S + Y+GAR
Sbjct: 188 RFKGPLGTFF----LREDSDKPIVFV-ASGTGFAPIKGIVEHALHSGITRPMVFYWGART 242
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ D ++W++S +PVLS+ P+ NW+G TG+V A + G V
Sbjct: 243 KADLYMADLAEQWQASNANFTYIPVLSEALPEDNWTGRTGFVHQAV--LDDFDDLSGHQV 300
Query: 264 VLCGQKQMAE 273
CG M E
Sbjct: 301 YACGAPVMVE 310
>gi|222457917|gb|ACM61847.1| putative alkene monooxygenase reductase [Mycobacterium sp. JS623]
Length = 376
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 92 GQYLQLRV--VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
GQY++++V D +F ++A+PPS +S +V+ + G T++V + +G +
Sbjct: 175 GQYIEVQVPGSDDEWRSF-SMANPPSISSR---VHLVVRVIPGGRFTSQVGKEIAEGTTM 230
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ FA+ R+ Y ++ A GSGI+P+ S++ S YGAR
Sbjct: 231 KLRGPLGQ-FAI-RLS----YRPIIFIAGGSGIAPVLSMLADLIESNNERPATFLYGART 284
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ DK +E E+ +P LS PD W GETG + R + +G
Sbjct: 285 AADLPMVDKLRELENEHDWFTFIPALSDPDDTPWDGETGLITEVLKR--HFPSTKGHESY 342
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
LCG M + ++ + G I
Sbjct: 343 LCGPPAMIDAALDVLTSSGCKDRHIF 368
>gi|406901058|gb|EKD43822.1| hypothetical protein ACD_72C00102G0001 [uncultured bacterium]
Length = 159
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS 197
+ ++ G+ + SQ+ G D I P ++ ++ A G G++P RS+I+ KE+
Sbjct: 1 MLNIQPGEKIVASQLSG-----DFILPKEKNKKLVFIAGGIGVTPFRSMIKYLIDKKEKR 55
Query: 198 DVRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPD---GNWSGETGYVQAAFSRAK 253
D+ ++Y + AY + E E G+K + L++ + NW+GETG++ + K
Sbjct: 56 DITIFYSQKTFNDFAYVNDLDEAEKELGIKTIYTLTEKNLVPTNWNGETGFIDMTMIK-K 114
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
I + L G M + G+ + +I+K+F
Sbjct: 115 YISDYNDRCYFLSGPHTMVVNFEKTLKNIGIKNSRIIKDF 154
>gi|341581579|ref|YP_004762071.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus sp. 4557]
gi|340809237|gb|AEK72394.1| cytochrome-c3 hydrogenase subunit gamma [Thermococcus sp. 4557]
Length = 294
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 25/237 (10%)
Query: 60 PLAEISPAAESLFHVSIDISDAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
PL E E LF + P++A T + GQ++QL + VG+ +S A
Sbjct: 29 PLTE----TEKLFLFRFE---DPELAEKWTFKPGQFVQLTIPGVGEVPISICSS----AM 77
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G FE ++ AG V+ L+ GD V + G GF VD + D +L+ A G
Sbjct: 78 RKGFFELCIRK-AGRVTTVIHKLQPGDTVLVRGPYGNGFPVDDWEGMD----LLLIAAGL 132
Query: 179 GISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQ 233
G +P+RS+ ++ + ++ AR K + + + + E+ VKI+ +++
Sbjct: 133 GTAPLRSVFLYAMDNRWKYGNITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR 192
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
D W G G Q A NP+ T + +CG +M + V ++ G E I
Sbjct: 193 -DPEWPGLHGRPQNFIVEANT--NPKKTAIAICGPPRMYKSVFESLINYGYRPENIF 246
>gi|345864138|ref|ZP_08816342.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124669|gb|EGW54545.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 336
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL + D K F +IA+ P E ++ +AG T + +++ ++
Sbjct: 132 AGQYLNFILEDGSKRAF-SIANAPH---DDKFIELHIRHIAGGKFTDFLFNDMQEKTILR 187
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATG-SGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G F + + P +IFA G +G +P++ +IE F + + LY+G R+
Sbjct: 188 LEAPLGSYFLREESERP------IIFAGGGTGFAPLKGIIEHAFEIGVKRKMVLYWGVRS 241
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAA 248
+ + K+W + VPVLS+PD W G+TG+V A
Sbjct: 242 KADLYLPELPKQWATDHDNFSYVPVLSEPDEGWQGQTGWVHEA 284
>gi|94311793|ref|YP_585003.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus
metallidurans CH34]
gi|93355645|gb|ABF09734.1| Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-
binding region [Cupriavidus metallidurans CH34]
Length = 351
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EEGPIELHIRHMPGGAFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI++++E + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIVEHAAYTGITRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + ++W K VPV+S Q D NW+G TG+V A
Sbjct: 245 WGGRRPRDLYMHALCEQWARDLPNFKYVPVVSDAQADDNWTGRTGFVHQA 294
>gi|407788396|ref|ZP_11135527.1| 2-polyprenylphenol hydroxylase/CDP-6-deoxy-delta-3,4-glucoseen
reductase-like protein [Celeribacter baekdonensis B30]
gi|407197493|gb|EKE67551.1| 2-polyprenylphenol hydroxylase/CDP-6-deoxy-delta-3,4-glucoseen
reductase-like protein [Celeribacter baekdonensis B30]
Length = 338
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 15/197 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQYL + + D G ++A+PP GA E ++ V+G + VL L+KG ++
Sbjct: 128 QAGQYLSVLMPD-GDSRNYSMANPPH--QNDGA-ELHIRHVSGGKFSQTVLANLEKGSIL 183
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F ++ E P +LI ATG+G +PI+S++E + LY+GA
Sbjct: 184 SVELPFGN-FTLNENT---EVPAILI-ATGTGFAPIKSIVEHQIREGGSRPLHLYWGANT 238
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + W + PVLS+P W G TG+V A + V
Sbjct: 239 EADIYLRSLPEMWAAKHDWFTFTPVLSEPPSAWKGRTGFVHKAVQ--SDFPDMSDLEVYA 296
Query: 266 CGQKQMAEEVTSIVLAE 282
CG M + + AE
Sbjct: 297 CGAPMMIDAASKDFCAE 313
>gi|270263448|ref|ZP_06191717.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
odorifera 4Rx13]
gi|270042332|gb|EFA15427.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
odorifera 4Rx13]
Length = 407
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ + + +YGAR+L+ M Y+D F ++ ++ QP+ NW+G TG++
Sbjct: 296 NRLNSKRKITFWYGARSLREMFYEDDFNRLQAENENFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKHHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|294669669|ref|ZP_06734736.1| hypothetical protein NEIELOOT_01570 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308582|gb|EFE49825.1| hypothetical protein NEIELOOT_01570 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 336
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG----LKKGDV 146
AGQY+ + + D ++ SP A A + K G + +L G +K+ +
Sbjct: 133 AGQYIDILLKDGHTRSYSLAGSP---AQAEQLELHIRKREGGLFSGMLFGNDPLIKEKTI 189
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ + MG F ++ +E +++ ATG+G +PI+S++ + + V LY+G R
Sbjct: 190 MRVRGPMGT-FTLNE----EETQPIILLATGTGFAPIQSILLRLIEQQSQRQVHLYWGGR 244
Query: 207 NLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
N + Y ++ E PVLS+ D NW+G GYVQ R + V
Sbjct: 245 NEAELYYAEQAAELTGRLKNGSFTPVLSRADKNWNGARGYVQQQVLRDHPDLSAH--QVY 302
Query: 265 LCGQKQMAEEVTSIVLAEG 283
CG M + I+ +G
Sbjct: 303 ACGSPAMITDAQEILTGQG 321
>gi|295696168|ref|YP_003589406.1| oxidoreductase FAD-binding domain-containing protein [Kyrpidia
tusciae DSM 2912]
gi|295411770|gb|ADG06262.1| Oxidoreductase FAD-binding domain protein [Kyrpidia tusciae DSM
2912]
Length = 343
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVV 147
+AGQY+ +R+ V +++S PS EF++K + G + L+ GD +
Sbjct: 136 KAGQYVDIRLPGVDPARSFSMSSLPS---QPEELEFMIKIIPGGYFSGILDQRLQVGDEL 192
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ESGFSSKERSDVRLYY 203
E++ G + + + + + G+G++P+ SL+ E G K +R +Y
Sbjct: 193 EVTGPFGNFYYREGAE------EMYVIGGGAGMAPLWSLMCDMAEKGIDRK----IRFFY 242
Query: 204 GARNLKRMAYQDKFKEWES--SGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNP- 258
GAR + + Y D+ +E + S VP LS+P NWSG TG + + P
Sbjct: 243 GARTARDLFYLDEIRELQDRFSDFAFVPALSEPSEGDNWSGATGMITEVLENYLQAHPPA 302
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G LCG M + ++ G I +
Sbjct: 303 AGIQGYLCGPPPMIDAAIRVLTNHGAEERNIFYD 336
>gi|148260383|ref|YP_001234510.1| oxidoreductase FAD/NAD(P)-binding subunit [Acidiphilium cryptum
JF-5]
gi|326403574|ref|YP_004283656.1| putative propane monooxygenase reductase [Acidiphilium multivorum
AIU301]
gi|146402064|gb|ABQ30591.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidiphilium
cryptum JF-5]
gi|325050436|dbj|BAJ80774.1| putative propane monooxygenase reductase [Acidiphilium multivorum
AIU301]
Length = 363
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 18/238 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
++EIS + ++ID+ D+P AGQY+ + V T S + +
Sbjct: 120 ISEISRLTHDIRGITIDL-DSP----IKFWAGQYVDITVTTEKGETITRSFSMANTPDQT 174
Query: 121 GAFEFLVKSV-AGSTAEVL--CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATG 177
+ F++K G + L G++ G V ++ G F + P +++ G
Sbjct: 175 KSLSFIIKKYPEGKFSGELDSGGIRIGADVSLTGPYGTCFRREGRTGP-----LILVGAG 229
Query: 178 SGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPD 235
SG+SPI S++ F+S E V +YGAR + + + D+ + ++ +PVLS
Sbjct: 230 SGMSPIWSILNDHFASGESRPVYFFYGARTREDLFHLDRIAQLADRHPELEFIPVLSHAS 289
Query: 236 GN--WSGETGYVQAAFSRAKKIFNPQGTG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G+ W GE G+V K G G V CG M + + ++ G +E++
Sbjct: 290 GDAGWEGERGFVHECVDARLKALGIDGEGDVYACGPPPMIDALQPVLFMNGFENERVF 347
>gi|386002744|ref|YP_005921043.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Methanosaeta
harundinacea 6Ac]
gi|357210800|gb|AET65420.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Methanosaeta
harundinacea 6Ac]
Length = 283
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 78 ISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEV 137
I D + GQ+L + V +G+ ++IAS P+ + V+ AG +
Sbjct: 44 IDDEDETVEIDYSPGQFLMVSVFGLGECP-ISIASSPTREP----LQICVRE-AGRITQG 97
Query: 138 LCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS 197
+ + GDV+ I G GF V +++ + V I GSG + +RSLI + + R
Sbjct: 98 MMAARVGDVLGIRGPFGNGFPVAQMKDRN----VAIAGGGSGFATLRSLIN--YIADHRD 151
Query: 198 DVR---LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKK 254
D R + YGAR + + + ++ W+++ +++ + D +W G G V + S
Sbjct: 152 DYREVTVVYGARTPQDLYFTSEYGSWQAADIEVGITVDMMDASWKGNVGLVTSLLSE--- 208
Query: 255 IFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+P LCG M V +L G ++I
Sbjct: 209 -IDPAPGAAALCGPPMMIRAVAKDLLDRGFIEQEI 242
>gi|241759706|ref|ZP_04757806.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria flavescens SK114]
gi|241319714|gb|EER56110.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria flavescens SK114]
Length = 334
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-KSVAGSTAEVLCG 140
P + S AGQY+ L + ++ +IA+ P G E + K G +E++ G
Sbjct: 122 PKVPSFTFYAGQYIDLLLPGNISRSY-SIANSPD---QEGVLELHIRKRENGVCSEMIFG 177
Query: 141 ----LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
+K+ +V + +G +Q + P VL+ ATG+G SPIRS++
Sbjct: 178 AEPKVKEKGIVRVKGPLG----TFTLQKDSDKPIVLL-ATGTGYSPIRSILLDLIHQNSE 232
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWES-----SGVKIVPVLSQPDGNWSGETGYVQAAFSR 251
V Y+GAR + + +E E+ K PVLS+PD +W GE GYVQ
Sbjct: 233 RPVHFYWGARQQEDLY---ALEEAEALIGRLKNAKFSPVLSKPDSDWKGENGYVQNV--A 287
Query: 252 AKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
A+ + V CG M E S++
Sbjct: 288 AQNYSDLSQYEVYACGSPAMTESAQSLL 315
>gi|403051371|ref|ZP_10905855.1| phenol 2-monooxygenase [Acinetobacter bereziniae LMG 1003]
Length = 353
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY+ L + +V +IA+ PS + E ++ V G T + LK GD +
Sbjct: 133 QAGQYINLHIPNVEGTRAFSIANSPS---ETNIIELHIRKVEGGQGTQYIHEQLKLGDKL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F V + P + V+ A GSG+S +S+I ++ + L+ GAR+
Sbjct: 190 VLSGPYGQ-FFVRKSDPQN----VIFIAGGSGLSSPQSMIMDLLEQGDQRIIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGV 263
L + ++KF++ E S + +P L+ P +W+G TG+V A + + G
Sbjct: 245 LAELYNREKFEQLVKEYSNFRYIPALNAPKSADDWTGFTGFVHEAVANYFE-HKCGGHKA 303
Query: 264 VLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 304 YLCGPPPMIDAAISTLM 320
>gi|94310720|ref|YP_583930.1| phenol 2-monooxygenase P5 protein [Cupriavidus metallidurans CH34]
gi|93354572|gb|ABF08661.1| Phenol hydroxylase P5 protein (Phenol 2-monooxygenase P5 component)
[Cupriavidus metallidurans CH34]
Length = 356
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEI 149
GQY+ + + P +IAS PS + E ++ V G +A L G+ +++
Sbjct: 140 GQYVNVWIGKEATPRAFSIASAPS----ADEIELNIRLVPGGSATTYVHEQLAVGERLQL 195
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S +GR F ++ D P V + A GSG+S RS+I S ++ + L +GAR
Sbjct: 196 SGPLGRFF----VRKSDPRPLVFM-AGGSGLSSPRSMILDLLESGDQRQIVLVHGARTAD 250
Query: 210 RMAYQDKFKEWES--SGVKIVPVLS-QPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ Y+D F+ + VPVLS + G+ W+GE GYV A + + ++ +G L
Sbjct: 251 ELYYRDAFEALTTRHDNFTYVPVLSAEAQGSAWAGERGYVHEA-AGSHFGYDFRGWRAYL 309
Query: 266 CGQKQMAEEVTSIVL 280
CG M E + ++
Sbjct: 310 CGPPPMIESCIAALM 324
>gi|224823876|ref|ZP_03696985.1| oxidoreductase FAD/NAD(P)-binding domain protein
[Pseudogulbenkiania ferrooxidans 2002]
gi|224604331|gb|EEG10505.1| oxidoreductase FAD/NAD(P)-binding domain protein
[Pseudogulbenkiania ferrooxidans 2002]
Length = 342
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAE-VLCGLKKGDVV 147
AGQY+ + + D GK +IA+ P E ++ GS +E V +K+ +++
Sbjct: 132 HAGQYIDILMKD-GKKRSFSIANAPH---DDAFLELHIRHQPGGSFSEYVFTQMKEREIM 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+G F ++ + P V + A+G+G +PI+ ++E S + Y+GAR
Sbjct: 188 RFKGPLGTFF----LREDSDKPIVFV-ASGTGFAPIKGIVEHALHSGITRPMVFYWGART 242
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ D ++W++S +PVLS+ P+ NW+G TG+V A + G V
Sbjct: 243 KADLYMADLAEQWQASNANFTYIPVLSEALPEDNWTGRTGFVHQAV--LDDFDDLSGHQV 300
Query: 264 VLCGQKQMAE 273
CG M E
Sbjct: 301 YACGAPVMVE 310
>gi|407000621|gb|EKE17860.1| hypothetical protein ACD_10C00238G0001 [uncultured bacterium]
Length = 290
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 81 APDIASSHTR----------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV 130
APD+ + H R AGQY+ + + D GK ++A+ P + ++ +
Sbjct: 66 APDVIALHLRLPANERLQFRAGQYIDILLKD-GKKRSFSLANAPE---DDALLQLHIRHI 121
Query: 131 AGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G T +V LK D++ + G + + P +++ A G+G +PI++++E
Sbjct: 122 PGGLFTDQVFSTLKVRDILRFNGPHGSFYLHEESAKP-----IILLAGGTGFAPIKAIVE 176
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKE-WESSG--VKIVPVLSQPD--GNWSGETG 243
+ K + + +Y+GA+ + YQ+ E W ++ +K +PVLS+P W+G +G
Sbjct: 177 HAIAQKIQRPIYIYWGAKAQVDL-YQNALPESWAAAHAQIKYIPVLSEPAPVDAWTGRSG 235
Query: 244 YVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
+V A + G V CG M E + +A+
Sbjct: 236 FVHQAV--IADFPDLSGHQVYACGSPGMIESAKADFVAQ 272
>gi|333925765|ref|YP_004499344.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia sp.
AS12]
gi|333930718|ref|YP_004504296.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
plymuthica AS9]
gi|386327589|ref|YP_006023759.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia sp.
AS13]
gi|386825411|ref|ZP_10112535.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
plymuthica PRI-2C]
gi|421781855|ref|ZP_16218316.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Serratia
plymuthica A30]
gi|333472325|gb|AEF44035.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
plymuthica AS9]
gi|333489825|gb|AEF48987.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia sp.
AS12]
gi|333959922|gb|AEG26695.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia sp.
AS13]
gi|386377754|gb|EIJ18567.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
plymuthica PRI-2C]
gi|407755975|gb|EKF66097.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Serratia
plymuthica A30]
Length = 407
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ + + +YGAR+L+ M Y+D F ++ ++ QP+ NW+G TG++
Sbjct: 296 NRLNSKRKITFWYGARSLREMFYEDDFNRLQAENENFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKHHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|336450950|ref|ZP_08621396.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina sp. A28L]
gi|336282206|gb|EGN75444.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina sp. A28L]
Length = 593
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + LC LK G+ Q++ G D + + + G+G++P+R+LI+
Sbjct: 431 GVGSTYLCNLKLGE-----QILVEGPYGDFTRMAGDTRKLFFIGGGAGMAPLRALIQEEL 485
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
SSK ++ YYGAR++ + Y+ + + ES + VPVLS D +W GE G+V
Sbjct: 486 SSKVPREMVFYYGARDVNELVYRKELESIAESKKLSFVPVLSDALTDSDWLGERGFVHEQ 545
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ +CG +M S++ G+ +I
Sbjct: 546 ALTYLSSVDVHEYDFYICGPPKMLSATLSMLANLGIDQSRI 586
>gi|221134447|ref|ZP_03560752.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Glaciecola sp. HTCC2999]
Length = 610
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 177 GSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ 233
GSG++P+RS+I E K++S + L YGAR + Y ++ K + +P LS
Sbjct: 487 GSGLAPLRSIIFEQLKKHKDKSGLTLIYGARTEDDLLYHNELKSLSEKHKNFSYIPTLSN 546
Query: 234 PDGNWSGETGYVQAA----FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
P W G +GYVQ S+ +F + LCG + M EV I+ G+ S +I
Sbjct: 547 PSEQWQGHSGYVQQVLLPYLSQKMALFPIE---FYLCGPEAMMSEVEKIITDAGIPSNQI 603
Query: 290 LKN 292
K+
Sbjct: 604 FKD 606
>gi|381400604|ref|ZP_09925528.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella kingae PYKK081]
gi|380834367|gb|EIC14211.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella kingae PYKK081]
Length = 335
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 98/197 (49%), Gaps = 16/197 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG-LKKGDVV 147
AGQY+++ + D G ++ +IA+ PS SG+ EF V+ G ++++ G LK G ++
Sbjct: 133 AGQYMEILLKD-GSRSY-SIANAPS---QSGSLEFHVRLHEGGLFSSQLFSGNLKSGSII 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G + + + +++ ATG+G +PI+S++ ++ V +Y+G R
Sbjct: 188 RLRGPLGSFY----LNEENGDKPLILLATGTGFAPIKSILTHLAQTQNTRHVHVYHGTRF 243
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + ++ + + PVLS+P+ +W+G TGY+ R N V
Sbjct: 244 ANGLYDEAALRDVLAQLPNARYTPVLSRPNDDWTGATGYITEHVLRDYP--NLSAHEVYA 301
Query: 266 CGQKQMAEEVTSIVLAE 282
CG M + + ++A+
Sbjct: 302 CGSPGMVRDSKAALVAQ 318
>gi|410631484|ref|ZP_11342159.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola arctica BSs20135]
gi|410148930|dbj|GAC19026.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola arctica BSs20135]
Length = 410
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA D ++ G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHIFDQ 297
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G+TG++
Sbjct: 298 LRRLKTSRKITFWYGARSLREMFYVEDFDMLQKENDNFKWHVALSDPQPEDNWKGDTGFI 357
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E I+
Sbjct: 358 HNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|338980428|ref|ZP_08631704.1| Oxidoreductase FAD/NAD(P)-binding subunit [Acidiphilium sp. PM]
gi|338208691|gb|EGO96534.1| Oxidoreductase FAD/NAD(P)-binding subunit [Acidiphilium sp. PM]
Length = 363
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 18/238 (7%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
++EIS + ++ID+ D+P AGQY+ + V T S + +
Sbjct: 120 ISEISRLTHDIRGITIDL-DSP----IKFWAGQYVDITVTTEKGETITRSFSMANTPDQA 174
Query: 121 GAFEFLVKSV-AGSTAEVL--CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATG 177
+ F++K G + L G++ G V ++ G F + P +++ G
Sbjct: 175 KSLSFIIKKYPEGKFSGELDSGGIRIGADVSLTGPYGTCFRREGRTGP-----LILVGAG 229
Query: 178 SGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPD 235
SG+SPI S++ F+S E V +YGAR + + + D+ + ++ +PVLS
Sbjct: 230 SGMSPIWSILNDHFASGESRPVYFFYGARTREDLFHLDRIAQLADRHPELEFIPVLSHAS 289
Query: 236 GN--WSGETGYVQAAFSRAKKIFNPQGTG-VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G+ W GE G+V K G G V CG M + + ++ G +E++
Sbjct: 290 GDAGWEGERGFVHECVDARLKALGIDGEGDVYACGPPPMIDALQPVLFMNGFENERVF 347
>gi|451946958|ref|YP_007467553.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Desulfocapsa
sulfexigens DSM 10523]
gi|451906306|gb|AGF77900.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Desulfocapsa
sulfexigens DSM 10523]
Length = 300
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 15/227 (6%)
Query: 68 AESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV 127
E L+ + I SD + + GQ++ L + +G+ F +I+S P+ G E +
Sbjct: 42 TEKLYQIRIVDSDQRHQFT--FKPGQFVMLELPGIGEGPF-SISSSPT---RHGDLELCI 95
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
++V G+ L + +G +V IS G F V+ ++ D +++ A G GI P+R+ +
Sbjct: 96 RAV-GNLTNFLSRVPRGTLVGISGPFGTSFPVEDMENSD----LILIAGGLGIVPLRAPL 150
Query: 188 ESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
S ++ R + + YGARN + + +++ W + + ++ Q D W G G +
Sbjct: 151 FSILENRSRYKQIDIIYGARNPSELLFTYQYQMWRQFDINLEIIVDQADEKWQGPVGLIT 210
Query: 247 AAFS-RAKKIFN--PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
R + N T ++CG M V +++ + +KI
Sbjct: 211 EILKHRLEAAGNNLSSNTYAIVCGPPVMFHFVCDMLINAQLPMQKIF 257
>gi|56460153|ref|YP_155434.1| Na(+)-translocating NADH-quinone reductase subunit F [Idiomarina
loihiensis L2TR]
gi|81363109|sp|Q5QYQ8.1|NQRF_IDILO RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|56179163|gb|AAV81885.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina loihiensis L2TR]
Length = 408
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIES 189
AG + + LK GD V IS G FA D ++ G+G++P+RS L +
Sbjct: 242 AGKMSSYIFSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHLFDQ 295
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
K V +YGAR+ K M Y + F +E E+ + QP+ NW G+TG++
Sbjct: 296 MRRIKTDRKVSFWYGARSKKEMFYVEDFDMLAEENENFDWHVALSDPQPEDNWEGDTGFI 355
Query: 246 QAA-FSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ R K + P+ +CG M V +++ GV E I+
Sbjct: 356 HNVLYERYLKDHDAPEDCEFYMCGPPVMNAAVINLLKDLGVEDENIM 402
>gi|220933217|ref|YP_002512116.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219994527|gb|ACL71129.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 340
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 23/171 (13%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGD 145
AGQY+ + + D + +F S A+A EFL V+ V G T +V +K+
Sbjct: 134 AGQYIDVLLKDGRRRSF-------SLANAPHRDEFLELHVRHVPGGVFTDQVFGEMKEKA 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ I +G F + + P VL+ G+G P+++++E F + + L++G
Sbjct: 187 LMRIEGPLGSFFLREDSERP-----VLLMGGGTGFGPLKAILEHAFEIGVKRPLHLFWGV 241
Query: 206 RNLKRMAYQDKF-KEWESS--GVKIVPVLSQPDGN--WSGETGYVQAAFSR 251
R KR Y D+ ++W + + PVLS+P W+GETGYV A R
Sbjct: 242 RA-KRDLYLDELPRQWAEAHEHFRYTPVLSEPQAEDAWTGETGYVHEALLR 291
>gi|415922694|ref|ZP_11554701.1| ATPase with chaperone activit, partial [Herbaspirillum frisingense
GSF30]
gi|407760606|gb|EKF69850.1| ATPase with chaperone activit, partial [Herbaspirillum frisingense
GSF30]
Length = 311
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P +A++ A+ + +S+ + P +AGQY++ + D GK ++A+ P
Sbjct: 66 PVRVAKLDKVADDVIVLSLQL---PANDRLQYKAGQYVEFLLRD-GKRRSYSMATAPH-- 119
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
++ + G T +V LK+ D++ I +G F + P +++ A
Sbjct: 120 -KDEHMSLHIRHLPGGLFTDQVFTTLKERDILRIEGPLGTFFLREDSDKP-----IILLA 173
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS- 232
+G+G +PI++++E + V LY+G R + + ++W+ K VPV+S
Sbjct: 174 SGTGFAPIKAIVEQLEHAGSTRPVTLYWGGRRPQDLYMDALCQQWQRDLPNFKYVPVVSN 233
Query: 233 -QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
QP+ WSG +G+V A + + G V CG
Sbjct: 234 AQPEDQWSGRSGFVHRAV--MEDFPDLSGHQVYACG 267
>gi|345304427|ref|YP_004826329.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Rhodothermus marinus SG0.5JP17-172]
gi|345113660|gb|AEN74492.1| oxidoreductase FAD/NAD(P)-binding domain protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 287
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
R GQ+ L V +G+ P S + + LV ++ G+ + LC K GDV+
Sbjct: 51 RPGQFNMLYVFGIGE-------VPISISGDPARPDRLVHTIRAVGAVSSALCARKAGDVI 103
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGAR 206
+ G + V+ + D V++ A G G++P+R I + ++ L YGAR
Sbjct: 104 GVRGPFGSAWPVEAAEGYD----VVVMAGGIGLAPLRPAIYHLLQHRGHYGNLVLLYGAR 159
Query: 207 NLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Y + + W +++ + W G G V RA F+P+ T +
Sbjct: 160 TPRDLLYVRELERWRGRFDMQVEVTVDHAGAGWFGHVGVVTTLLPRAH--FDPEETIAFV 217
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M ++ GV E+I
Sbjct: 218 CGPEIMMRFAAKALMERGVVPERI 241
>gi|375337259|ref|ZP_09778603.1| Na(+)-translocating NADH-quinone reductase subunit F
[Succinivibrionaceae bacterium WG-1]
Length = 413
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LKKGD V IS G FA D ++ G+G++P+RS I
Sbjct: 247 CGQMSSYIWSLKKGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHILDQ 300
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
+ + +YGAR+LK + Y+++F +E+ + + P+ NW+G TG++
Sbjct: 301 LKRIGTKRKISFWYGARSLKELFYKEEFDKLAEEYPNFTWHVAMSDPLPEDNWTGYTGFI 360
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
+ K P+ +CG M + V +++ GV E I L NF
Sbjct: 361 HNVLYENYLKGHKAPEDCEFYMCGPPMMTKSVINMLHDLGVEDENILLDNF 411
>gi|84685633|ref|ZP_01013530.1| Na(+)-translocating NADH-quinone reductase subunit F
[Maritimibacter alkaliphilus HTCC2654]
gi|84666299|gb|EAQ12772.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodobacterales bacterium HTCC2654]
Length = 407
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D P ++F G+G++P+RS I
Sbjct: 241 GKMSSYIFNLKPGDKVTISGPFGEFFARDT-------PKEMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
E D + +YGAR+ + M + + F +E+++ + + PD NW G TG+
Sbjct: 294 LKRLENRDRKITFWYGARSKREMFFVEDFDQLAQEFDNFEWHVALSDALPDDNWGGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++L GV E I+
Sbjct: 354 IHNVLFEEYLKNHPAPEDCEYYMCGPPIMNQSVINMLLELGVDREDIM 401
>gi|312138946|ref|YP_004006282.1| oxidoreductase [Rhodococcus equi 103S]
gi|311888285|emb|CBH47597.1| putative oxidoreductase [Rhodococcus equi 103S]
Length = 277
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
++I A G G++ +R+ + + + ++R +V L GAR+ + Y+ + W S+G+ +V
Sbjct: 114 LVIVAGGVGLAAVRAPVLAAVAHRQRHRNVTLVVGARSPGEILYRRELDGWRSAGIDVVV 173
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ QP +W+G G+V A +R P T ++CG + M ++ GV +I
Sbjct: 174 TIDQPARDWNGPVGFVTEALARLT--LEPARTRALVCGPEAMMRFAVRVLEGRGVDRRRI 231
>gi|427386700|ref|ZP_18882897.1| hypothetical protein HMPREF9447_03930 [Bacteroides oleiciplenus YIT
12058]
gi|425726190|gb|EKU89056.1| hypothetical protein HMPREF9447_03930 [Bacteroides oleiciplenus YIT
12058]
Length = 281
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 50 RQDTTVWTPTPL--AEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTF 107
RQ+ +++ P + +I+ A + + D + H +AGQ+ + G+ TF
Sbjct: 3 RQEYSLYLPYRMIIEKITNEAPGVKTFRLKFKDEQEGEEFHFKAGQFGEYSSFGDGESTF 62
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+SP + G E + AG L L++G + G F +D + +
Sbjct: 63 CIASSP----TRKGYIECTFRE-AGRVTMGLSRLEEGSTIGFRGPFGNTFPIDEWKGKN- 116
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESS-GV 225
+L A G + P+R +I + +E +D+ + YGA+++ + Y+++ KEW++ V
Sbjct: 117 ---LLFVAGGIALPPMRCVIWNALDLRENFNDITIVYGAKSVGDLVYKEELKEWDNRPDV 173
Query: 226 KIVPVLSQPDG---NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
+++ + P G +W G+ G+V + + T VV+CG M + ++
Sbjct: 174 RLITTVD-PGGETPDWKGQVGFVPSVLEEVAP--DSTNTIVVVCGPPVMIKFTFPVLEKL 230
Query: 283 GVSSEKI 289
G E I
Sbjct: 231 GFRDENI 237
>gi|399577051|ref|ZP_10770805.1| hypothetical protein HSB1_28440 [Halogranum salarium B-1]
gi|399237833|gb|EJN58763.1| hypothetical protein HSB1_28440 [Halogranum salarium B-1]
Length = 348
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 49/227 (21%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+++ + +P ++AS P+ E + V G T +L G ++GD
Sbjct: 116 GQYVRI-SFEEEEPRVYSLASSPN----EDELELCITRVPGGELTPSLLDGAERGD---- 166
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLI----ESGFSSK--ERSDVRLY 202
+ RG D + DE ++F ATG+G++P+RS+I E G S E DV L+
Sbjct: 167 -DLFVRGPFGDELSLLDESDRYMVFVATGTGVAPLRSMIRYTFEEGLDSHDGENRDVWLF 225
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSR--AKKI- 255
GA + Y +F+E E VP LSQ +W GET YVQ + A+ +
Sbjct: 226 LGASWRDDLPYHAEFEELSREHENFHYVPTLSQERLLTDWVGETAYVQQTLVKYLAEGVD 285
Query: 256 -----------------------FNPQGTGVVLCGQKQMAEEVTSIV 279
+P+ + +CG +M E VT +
Sbjct: 286 RERVPEELHGHLDSEARYDIDARLDPENAELYICGVGRMCESVTDVT 332
>gi|333891580|ref|YP_004465455.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
sp. SN2]
gi|332991598|gb|AEF01653.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
sp. SN2]
Length = 410
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETENEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
K + +YGAR+L+ M Y + F E E+ K LS QP+ NW G TG+
Sbjct: 297 QLRRLKSDRKMSFWYGARSLREMFYTEDFDELAAENDNFKWHVALSDPQPEDNWEGYTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|157369203|ref|YP_001477192.1| Na(+)-translocating NADH-quinone reductase subunit F [Serratia
proteamaculans 568]
gi|189030477|sp|A8GAC4.1|NQRF_SERP5 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|157320967|gb|ABV40064.1| NADH:ubiquinone oxidoreductase, subunit F [Serratia proteamaculans
568]
Length = 407
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ K + + +YGAR+L+ M Y++ F + ++ ++ QP+ NW+G TG++
Sbjct: 296 NRLKSKRKITFWYGARSLREMFYEEDFNQLQAENENFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLRNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|162447824|ref|YP_001620956.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Acholeplasma laidlawii PG-8A]
gi|161985931|gb|ABX81580.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Acholeplasma laidlawii PG-8A]
Length = 358
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
+ GQYLQ+ V + +IAS P+ E +++ V G A L GD +
Sbjct: 158 KPGQYLQIEVPGIETTRAYSIASNPNDLRHP---EVIIRLVPGGVATKFIHKALVIGDTL 214
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+I+ G F +Q P ++I A GSG +PIRS+I + ++GAR
Sbjct: 215 KITGPFGDFF----LQEESTRPIIMI-AGGSGKAPIRSIIYKLIEQNMPRKAQYFFGART 269
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
K + Y +FK+ E+ K +P LS P+ W + G + +R + G
Sbjct: 270 KKDLYYTKEFKDVEAMYPNFKYIPALSTPLPEDEWDLDIGLITEVVARHTG--DLSGHEA 327
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M + ++ +G+ E I
Sbjct: 328 YLCGSPGMIDACIKVLREKGMPEEHI 353
>gi|57207888|dbj|BAD86552.1| penol hydroxylase component [Wautersia numazuensis]
Length = 352
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEI 149
GQY+ + + P ++AS PS + E ++ V G +A L G+ +++
Sbjct: 136 GQYVNVWIGKEAAPRAFSVASAPS----ANEIELNIRLVPGGSATTYVHEQLGVGERLQL 191
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S +GR F ++ D P V + A GSG+S RS+I S ++ ++ L GARN
Sbjct: 192 SGPLGRFF----VRKSDPRPLVFM-AGGSGLSSPRSMILDLLESGDQREIVLVQGARNAG 246
Query: 210 RMAYQDKFKEW--ESSGVKIVPVLS-QPD-GNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ Y+D F+ + +PVLS +P+ +W+GE GYV R + +G L
Sbjct: 247 ELYYRDAFETIARQHDNFTYLPVLSGEPEQSDWAGERGYVHDLAGRHFS-HDFRGWRAYL 305
Query: 266 CGQKQMAEEVTSIVL 280
CG M E + ++
Sbjct: 306 CGPPPMIEACIATLM 320
>gi|359436542|ref|ZP_09226638.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20311]
gi|359446895|ref|ZP_09236529.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20439]
gi|358028748|dbj|GAA62887.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20311]
gi|358039255|dbj|GAA72778.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20439]
Length = 610
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 172 LIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIV 228
+ GSG++P+RS+I E K++S + L YGAR + Y ++ K + +
Sbjct: 482 VFIGAGSGLAPLRSIIFEQLKKHKDKSGLTLIYGARTEDDLLYHNELKSLSEKHKNFSYI 541
Query: 229 PVLSQPDGNWSGETGYVQAAF----SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
P LS P W G +GYVQ ++ ++ + LCG + M EV I+ G+
Sbjct: 542 PTLSNPSEEWQGHSGYVQKVLLPYMNQKSELLLAE---FYLCGPEAMMSEVEKIITDAGI 598
Query: 285 SSEKILKN 292
S KI K+
Sbjct: 599 PSNKIFKD 606
>gi|325673778|ref|ZP_08153469.1| sulfite reductase (NADPH) beta subunit [Rhodococcus equi ATCC
33707]
gi|325555799|gb|EGD25470.1| sulfite reductase (NADPH) beta subunit [Rhodococcus equi ATCC
33707]
Length = 277
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
++I A G G++ +R+ + + + ++R +V L GAR+ + Y+ + W S+G+ +V
Sbjct: 114 LVIVAGGVGLAAVRAPVLAAVAHRQRHRNVTLVVGARSPGEILYRRELDGWRSAGIDVVV 173
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ QP +W+G G+V A +R P T ++CG + M ++ GV +I
Sbjct: 174 TIDQPARDWNGPVGFVTEALARLT--LEPARTRALVCGPEAMMRFAVRVLEGRGVDRRRI 231
>gi|315127711|ref|YP_004069714.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Pseudoalteromonas sp. SM9913]
gi|315016225|gb|ADT69563.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Pseudoalteromonas sp. SM9913]
Length = 610
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 172 LIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIV 228
+ GSG++P+RS+I E K++S + L YGAR + Y ++ K + +
Sbjct: 482 VFIGAGSGLAPLRSIIFEQLKKHKDKSGLTLIYGARTEDDLLYHNELKSLSEKHKNFSYI 541
Query: 229 PVLSQPDGNWSGETGYVQAAF----SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
P LS P W G +GYVQ ++ ++ + LCG + M EV I+ G+
Sbjct: 542 PTLSNPSEEWQGHSGYVQKVLLPYMNQKSELLLAE---FYLCGPEAMMSEVEKIITDAGI 598
Query: 285 SSEKILKN 292
S KI K+
Sbjct: 599 PSNKIFKD 606
>gi|171464041|ref|YP_001798154.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193579|gb|ACB44540.1| oxidoreductase FAD/NAD(P)-binding domain protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 348
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCG-----LKKG 144
AGQYL+ + D G+ +IA+ P G E ++ + G + + G LK+
Sbjct: 136 AGQYLEFLLKD-GQRRAYSIANAPE---QEGPLELHIRHLPGGLFTDFVFGVTTPALKEK 191
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
D++ +G F + + P ++ A G+G +PI+S+IE K + LY+G
Sbjct: 192 DILRFEGPLGSFFLREESKKP-----IIFVAAGTGFAPIKSIIEQMQVKKIHRPIHLYWG 246
Query: 205 ARNLKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + D K WE S K +PV+S + +W G TG+V A N Q
Sbjct: 247 GRRPSDLYLSDLCKSWEKEISDFKYIPVISDALAEDDWQGRTGFVHQAVMTDHP--NMQD 304
Query: 261 TGVVLCG 267
V CG
Sbjct: 305 FQVYACG 311
>gi|121999060|ref|YP_001003847.1| oxidoreductase FAD/NAD(P)-binding subunit [Halorhodospira halophila
SL1]
gi|121590465|gb|ABM63045.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halorhodospira
halophila SL1]
Length = 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
R GQY+++ + D + F +SP E ++ + G T V +++G+++
Sbjct: 131 RPGQYIEILLGDGARRAFSLASSPLD----DEHLELHIRHIPGGRFTDYVFNEMREGELL 186
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G+ + + P L+ G+G P++ ++E + ++ + LY+G R
Sbjct: 187 RVEGPLGQLYLREDSDRP-----ALLVGGGTGFGPLKGIVEHALARGDQRPLHLYWGTRE 241
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ D + W + V PVLS+P + +W+G G+V A + G V
Sbjct: 242 RAGLYLHDLARGWAEAQPQVDYTPVLSEPRAEDHWAGRVGWVHEAV--VCDYPDLSGFDV 299
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ G M E + L G++ E++ +
Sbjct: 300 YMSGPPPMTEAARAAFLEHGLNPERLFYD 328
>gi|134296663|ref|YP_001120398.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia
vietnamiensis G4]
gi|387903006|ref|YP_006333345.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. KJ006]
gi|134139820|gb|ABO55563.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
vietnamiensis G4]
gi|387577898|gb|AFJ86614.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia sp. KJ006]
Length = 343
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G E ++ + G T V +K+ D++
Sbjct: 134 AGQYVEFILKDGSRRSY-SMANAPH---EEGPIELHIRHMPGGKFTDHVFGAMKERDILR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+G F + P +++ A+G+G +PI+++IE + + LY+GAR
Sbjct: 190 FEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIIEHVKHAGITRPMTLYWGARRK 244
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + + ++W E K VPVLS+P+ W+G TG+V A + + + G V
Sbjct: 245 QDIYLGELAEQWAREIPNFKYVPVLSEPEDADQWTGRTGFVHRAV--IEDLPDLSGYQVY 302
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 303 ACGAPVMVE 311
>gi|388457398|ref|ZP_10139693.1| ferredoxin-NADP reductase [Fluoribacter dumoffii Tex-KL]
Length = 244
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFAS----ASGAFEFLVKSVAGSTAEVLCGLKKGD 145
GQ++ + GKP +IA+ P + A+G F G E L LK GD
Sbjct: 38 GQFITIHFEHQGKPLKRSYSIANTPKMDNQIELAAGYF------ANGPGTEFLYNLKPGD 91
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS---DVRLY 202
V+IS GR D I P + ++ AT +GI+P RS+I E+ +V +
Sbjct: 92 AVQISGPFGRLTIKDEI--PGRF---ILVATSTGITPYRSMIPKLAQLMEQHPELEVVIL 146
Query: 203 YGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGE---TGYVQAAFSRAKKI 255
G + + + Y D+F +++ + K P LS+ N E +GYVQ AF
Sbjct: 147 QGVQRREEILYGDEFLAFSQKYPRASFK--PYLSRQPANELNEKEFSGYVQHAFPSLN-- 202
Query: 256 FNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
NPQ V LCG M +E + + +G + ++I++
Sbjct: 203 LNPQRDVVYLCGNPGMIDEAFNSLKQQGFAMQQIIR 238
>gi|239616974|ref|YP_002940296.1| oxidoreductase FAD/NAD(P)-binding domain protein [Kosmotoga olearia
TBF 19.5.1]
gi|239505805|gb|ACR79292.1| oxidoreductase FAD/NAD(P)-binding domain protein [Kosmotoga olearia
TBF 19.5.1]
Length = 273
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
+ GQ++++ + +G+ F +P S A E + V G E + +K G V +
Sbjct: 36 KTGQFVEVGLPGIGEGPF----TPSSSQYAKNPIEVTIMKV-GYMTEKMHEIKPGATVAL 90
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNL 208
G G+ +DR + D VLI G G++P+RSL+ + + + +GAR
Sbjct: 91 RGPYGNGYPLDRFKGKD----VLIVGGGVGLAPLRSLLLTLMHDIDDYRSITACFGARTP 146
Query: 209 KRMAYQDKFKEWESSG-VKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Y+D+ KEWE +G V+I + + N W G G V + F+ + T +
Sbjct: 147 EDLIYKDQLKEWEETGKVRITLSVDRVPENQKWEGNIGVVTTLLKPLE--FDAKNTVAAV 204
Query: 266 CGQKQMAEEVTSIVLAE 282
CG M + TS++L E
Sbjct: 205 CGPPIMM-KFTSLMLLE 220
>gi|347730988|ref|ZP_08864095.1| oxidoreductase FAD-binding domain protein [Desulfovibrio sp. A2]
gi|347520189|gb|EGY27327.1| oxidoreductase FAD-binding domain protein [Desulfovibrio sp. A2]
Length = 295
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+PA ++L + I D + S GQ QL + VG+ TF+ I SPP+ +
Sbjct: 39 TPAIKTL---RVRIDDPARMESFRFNPGQVGQLSLFGVGESTFV-INSPPT------RMD 88
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+L S+ AG L GLK GD V + +G F + ++ D ++ G G++P
Sbjct: 89 YLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPYEDMRGKD----IVFVGGGIGMAP 144
Query: 183 IRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSG 240
+R+L+ ++ + ++ L YGAR MA++D +EW S ++ + Q +W
Sbjct: 145 LRTLLLYMLDNRADYGNITLLYGARTPTDMAFRDDVQEWLGRSDMQTTLTVDQAPEDWPH 204
Query: 241 ETGYV 245
G +
Sbjct: 205 RAGLI 209
>gi|148262228|ref|YP_001228934.1| oxidoreductase FAD/NAD(P)-binding subunit [Geobacter uraniireducens
Rf4]
gi|148265608|ref|YP_001232314.1| oxidoreductase FAD/NAD(P)-binding subunit [Geobacter uraniireducens
Rf4]
gi|146395728|gb|ABQ24361.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter
uraniireducens Rf4]
gi|146399108|gb|ABQ27741.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter
uraniireducens Rf4]
Length = 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF +SP + G E ++ G E L L+ GD + +
Sbjct: 44 RAGQFAEYSAFGAGESTFCIASSP----TRKGYIECCFRA-TGRVTESLRQLEVGDTMGV 98
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNL 208
G F ++ E +++ A G + P+R++I + ++R D+ + YGAR
Sbjct: 99 RGPYGNSFPIEEF----EGKSLVFVAGGIALPPLRTVIWNCLDLRDRFKDITIVYGARTE 154
Query: 209 KRMAYQDKFKEWESSG-VKIVPVLSQPDGN---WSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ Y+ + +EW+ G V +V + P GN W G+ G+V A + Q T +
Sbjct: 155 ADLVYKRELEEWQERGDVNLVKTVD-PGGNGPDWDGKVGFVPTILEEATP--SAQNTIAL 211
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKI 289
+CG M + ++ G + + I
Sbjct: 212 VCGPPVMIKFTLPVLERLGFTDDAI 236
>gi|407701421|ref|YP_006826208.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'Black Sea 11']
gi|407250568|gb|AFT79753.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'Black Sea 11']
Length = 410
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETDNEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
K + + +YGAR+L+ M Y + F E E+ + LS QP+ NW G TG+
Sbjct: 297 QLRRLKSKRKMSFWYGARSLREMFYTEDFDELAAENDNFEWHVALSDPQPEDNWEGYTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIM 404
>gi|401675716|ref|ZP_10807704.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
sp. SST3]
gi|400217018|gb|EJO47916.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
sp. SST3]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 296 KRLGSKRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E I+
Sbjct: 356 NVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|410863070|ref|YP_006978304.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii AltDE1]
gi|410820332|gb|AFV86949.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii AltDE1]
Length = 410
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETENEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
K + + +YGAR+L+ M Y + F E E+ + LS QP+ NW G TG+
Sbjct: 297 QLRRLKSKRKMSFWYGARSLREMFYTEDFDELAAENDNFEWHVALSDPQPEDNWEGYTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|319792081|ref|YP_004153721.1| oxidoreductase fad/NAD(P)-binding domain-containing protein
[Variovorax paradoxus EPS]
gi|315594544|gb|ADU35610.1| oxidoreductase FAD/NAD(P)-binding domain protein [Variovorax
paradoxus EPS]
Length = 354
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + ++ +P + + E ++ + G T V +K+ +++
Sbjct: 141 HAGQYVEFILRDGARRSYSMANAPHTLSQPGTGIELHLRHLPGGKFTDHVFGVMKEKEIL 200
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERSDVRLYYGAR 206
I G F + P +++ A+G+G +PI++L+E F ER LY+G R
Sbjct: 201 RIEGPFGSFFLREDSDKP-----MILLASGTGFAPIKALLEHMKFKGIERP-ATLYWGGR 254
Query: 207 NLKRMAYQDKFKEW------ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP 258
+ + Y D EW E ++ VPV+S PD NW+G TG+V A + +
Sbjct: 255 RPEDL-YMD---EWVRGQLAEMPNLRYVPVISNATPDDNWTGRTGFVHQAV--LEDFADL 308
Query: 259 QGTGVVLCG 267
G V CG
Sbjct: 309 SGHQVYACG 317
>gi|406598161|ref|YP_006749291.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii ATCC 27126]
gi|407685187|ref|YP_006800361.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'English Channel 673']
gi|407689114|ref|YP_006804287.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|406375482|gb|AFS38737.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii ATCC 27126]
gi|407246798|gb|AFT75984.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'English Channel 673']
gi|407292494|gb|AFT96806.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 410
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETENEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
K + + +YGAR+L+ M Y + F E E+ + LS QP+ NW G TG+
Sbjct: 297 QLRRLKSKRKMSFWYGARSLREMFYTEDFDELAAENDNFEWHVALSDPQPEDNWEGYTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIM 404
>gi|387890408|ref|YP_006320706.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
blattae DSM 4481]
gi|414595482|ref|ZP_11445102.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
blattae NBRC 105725]
gi|386925241|gb|AFJ48195.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
blattae DSM 4481]
gi|403193566|dbj|GAB82754.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
blattae NBRC 105725]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I F
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHI---F 292
Query: 192 SSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETG 243
+R + +YGAR+L+ M YQD+F++ ++ LS+P + NW+G TG
Sbjct: 293 DQLKRLSSTRKISFWYGARSLREMFYQDEFEQLARDNPNFTFHIALSEPLAEDNWTGYTG 352
Query: 244 YVQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + P+ +CG M V +++ + GV E IL
Sbjct: 353 FIHNVLYEHYLRDHQAPEDCEFYMCGPPMMNASVITMLHSLGVEDENIL 401
>gi|345876400|ref|ZP_08828169.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344226523|gb|EGV52857.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 336
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQYL + D K F +IA+ P E ++ +AG T + ++ ++
Sbjct: 132 AGQYLNFILEDGSKRAF-SIANAPH---DDKFIELHIRHIAGGKFTDFLFNDMQAKTILR 187
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATG-SGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G F + + P +IFA G +G +P++ +IE F + + LY+G R+
Sbjct: 188 LEAPLGSYFLREESERP------IIFAGGGTGFAPLKGIIEHAFEIGVKRKMVLYWGVRS 241
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAA 248
+ + K+W + VPVLS+PD W G+TG+V A
Sbjct: 242 KADLYLPELPKQWATDHDNFSYVPVLSEPDEGWQGQTGWVHEA 284
>gi|359438093|ref|ZP_09228136.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20311]
gi|358027219|dbj|GAA64385.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20311]
Length = 247
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + + +SLF +++ P +AGQ+ +L ++D K IA S
Sbjct: 4 WIDATVKSVKWWNDSLFSITVHADVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A S EF L+ V G + L LK GD V I + F +D + P E +
Sbjct: 54 YVNAPQSPDLEFYLINVVDGLLSSHLATLKPGDTVLIERRATGFFTLDEV-PASE--QLW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVKIVP 229
+ +TG+ I P S+++ ++ + L +G R ++YQ +K + S + +P
Sbjct: 111 MLSTGTAIGPFLSMLQQSEVWQKYKHINLVHGVRQNSDLSYQELINKLIKSNPSQLNYIP 170
Query: 230 VLSQ--PDGNWSGETGYV---QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGV 284
V+S+ P +G V A + P +LCG QM ++ T ++LA+
Sbjct: 171 VVSREVPLQGLAGRITTVIENNALYEHVGLWATPNNAQFMLCGNPQMVKDTTELLLAQNY 230
Query: 285 SSEK 288
+
Sbjct: 231 KRNR 234
>gi|374333348|ref|YP_005083532.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudovibrio
sp. FO-BEG1]
gi|359346136|gb|AEV39510.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudovibrio
sp. FO-BEG1]
Length = 407
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA + + ++ G+G++P+RS I
Sbjct: 240 AGKMSSFIFNLKPGDKVTISGPFGEFFARETDK------EMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
E D + +YGAR+ K M + + F KE+ + + QPD +W G TG+
Sbjct: 294 LKRLENRDRKITFWYGARSKKEMFFVEDFDQLAKEFPNFTWHVALSDPQPDDDWDGYTGF 353
Query: 245 VQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++L GV E I+
Sbjct: 354 IHNVLYNEYLKDHAAPEDCEYYMCGPPIMNQSVINMLLDLGVEREDIM 401
>gi|302844442|ref|XP_002953761.1| hypothetical protein VOLCADRAFT_94569 [Volvox carteri f.
nagariensis]
gi|300260869|gb|EFJ45085.1| hypothetical protein VOLCADRAFT_94569 [Volvox carteri f.
nagariensis]
Length = 349
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 23/145 (15%)
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQP---PDEYPTVLIFATGSGISPIRSLIES-----GF 191
G+ DVVE+ +G G + R P PTV++F G GI+ SL+ES
Sbjct: 148 GMGPDDVVEVGPFVGTGLDL-RSSPLMAMYSCPTVVMFVAGKGIATCMSLLESTSDVPNL 206
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAAFS 250
S + R DVR+YY A N +A++D+F +WE G +KI+ T Q AF
Sbjct: 207 SLEFRRDVRVYYKAPNASSIAFKDRFDDWEQGGPLKILTT-----------TTSFQDAFD 255
Query: 251 RAKKI-FNPQGTG-VVLCGQKQMAE 273
+ ++P+ TG V+L G + AE
Sbjct: 256 DDDSLTYDPESTGAVILTGGDEEAE 280
>gi|326388544|ref|ZP_08210138.1| ferredoxin oxidoreductase [Novosphingobium nitrogenifigens DSM
19370]
gi|326207009|gb|EGD57832.1| ferredoxin oxidoreductase [Novosphingobium nitrogenifigens DSM
19370]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L V + P +IASPPS A G E ++ V G +T + ++G +
Sbjct: 134 QAGQYVMLEVPGIAGPRAFSIASPPSQA---GEIELHIRLVPGGKATGWLHENAREGLKL 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ + GR F V R + L A GSG+S +S+I E + L +GAR+
Sbjct: 191 KFAGPYGR-FHVRR----SANLSKLFLAGGSGLSSPQSMILDLLEKGETGPILLVHGARD 245
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D F+ E + +PV+S D +W G G+V A R + G L
Sbjct: 246 AAGLYHADIFRALEEAHANFAYLPVVSGEDASWQGARGFVHEAIER-RFGGRFDGQQAYL 304
Query: 266 CGQKQMAEEVTSIVL 280
CG M + + ++
Sbjct: 305 CGPPPMIDACITTLM 319
>gi|404498279|ref|YP_006722385.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter metallireducens GS-15]
gi|418068062|ref|ZP_12705382.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter
metallireducens RCH3]
gi|78195876|gb|ABB33643.1| heterodisulfide oxidoreductase, NAD(P)H oxidoreductase subunit F
[Geobacter metallireducens GS-15]
gi|373557674|gb|EHP84068.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter
metallireducens RCH3]
Length = 281
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF IAS P+ G E ++V G E L L+ GD + +
Sbjct: 45 RAGQFAEYSAFGAGEATF-CIASAPT---RKGYIECCFRAV-GRVTEALRQLEVGDAIGV 99
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
G F ++ + L+F A G + P+R+LI +E+ D+ + YGAR
Sbjct: 100 RGPYGNSFPIEEF-----FGRNLVFVAGGIALPPLRTLIGQCLDWREKFGDITIVYGART 154
Query: 208 LKRMAYQDKFKEWES-SGVKIVPVLSQPDGN---WSGETGYVQAAFSRA 252
+ Y+ + EWE S V++V + P GN W G+ G+V A
Sbjct: 155 EGDLVYKRELTEWEERSDVRLVKTVD-PGGNSPDWDGKVGFVPTILEEA 202
>gi|307111915|gb|EFN60149.1| expressed protein [Chlorella variabilis]
Length = 355
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 168 YPTVLIFATGSGISPIRSLIE-----SGFSSKERSDVRLYYGARNLKRMAYQDKFKEW-E 221
+PTV+IFA +GI+ R+LIE SG + R+DVR+YY A N + Y+DK++EW E
Sbjct: 217 FPTVVIFAESAGIATARALIEAGSDPSGLNFTRRADVRMYYRAPNEAALCYKDKYEEWGE 276
Query: 222 SSGVKIV 228
GVK++
Sbjct: 277 RYGVKVI 283
>gi|322369261|ref|ZP_08043826.1| oxidoreductase FAD/NAD(P)-binding domain protein [Haladaptatus
paucihalophilus DX253]
gi|320550993|gb|EFW92642.1| oxidoreductase FAD/NAD(P)-binding domain protein [Haladaptatus
paucihalophilus DX253]
Length = 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 70 SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKS 129
SL V+ID + D GQY +R +P +IAS P+ + E V+
Sbjct: 82 SLMSVAIDFEEEFDFV-----PGQYATMRYEHTPRP--YSIASSPN----ADGIELCVRR 130
Query: 130 VAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
V T+++ L +GD V + G F ++ D + ATG+G++P+RS+I
Sbjct: 131 VPHGRLTSKLFEDLSEGDRVTVRGPNG-DFVLEEPSGRD----MAFLATGTGVAPLRSMI 185
Query: 188 ESGFS------SKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GN 237
+ F ER DV L+ GA +AY+++F+E E VP S+ + +
Sbjct: 186 KYTFEEGRDEYEGERRDVWLFLGASWKDDLAYREEFEELDDEHENFHFVPTCSREEYLTD 245
Query: 238 WSGETGYVQ 246
W GET YVQ
Sbjct: 246 WEGETDYVQ 254
>gi|333984300|ref|YP_004513510.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylomonas
methanica MC09]
gi|333808341|gb|AEG01011.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylomonas
methanica MC09]
Length = 406
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V +S G FA D ++ G+G++P+RS I
Sbjct: 241 GVMSSFIFNLKPGDKVFVSGPYGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 294
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F KE ++ + + P+ NW G TG++
Sbjct: 295 RRLKSKRKMTFWYGARSKREMFYVEDFDMLAKENDNFEWHVALSDALPEDNWKGYTGFIH 354
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M V +++LA GV E I+
Sbjct: 355 NVLFEEFLKNHPNPEDCEYYMCGPPIMNSSVINMLLANGVDPENIM 400
>gi|410639186|ref|ZP_11349739.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola lipolytica E3]
gi|410141714|dbj|GAC16944.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola lipolytica E3]
Length = 410
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETQAEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGY 244
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G+TG+
Sbjct: 297 QLRRIKTDRKITFWYGARSLREMFYVEDFDMLQSENENFKWHVALSDPQPEDNWEGDTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|220908065|ref|YP_002483376.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Cyanothece sp. PCC 7425]
gi|219864676|gb|ACL45015.1| oxidoreductase FAD/NAD(P)-binding domain protein [Cyanothece sp.
PCC 7425]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 25/250 (10%)
Query: 51 QDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRA-------GQYLQLRVVDVG 103
++ ++ PLA + P ++ VS + PDI + GQ+ L VG
Sbjct: 8 EENSLGAALPLA-VEPMLPKIYRVSKVRKETPDIFTLELAGEPLVFAPGQFNMLYAFGVG 66
Query: 104 KPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDR 161
+ + ++I+ P LV S+ G+ L L+ GD + I GR + +
Sbjct: 67 E-SAISISGNPQEPDK------LVHSIRSVGTVTHALSRLRPGDALGIRGPFGRAWPLAT 119
Query: 162 IQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW 220
Q D V+ A G G++P+R I + + + V L YG R + +A+Q ++W
Sbjct: 120 AQGSD----VIFIAGGIGLAPLRPAIYQVLADRAKYGQVVLLYGTRTPEDIAFQRNLRQW 175
Query: 221 ESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
S ++ +S W G G V + RA F+P T ++CG + M + +
Sbjct: 176 RSRLDTEVWVTVSSAATGWQGNVGVVTSLIQRAS--FDPLHTIALICGPEIMMKFAIQEL 233
Query: 280 LAEGVSSEKI 289
L +GV+ I
Sbjct: 234 LKQGVNPANI 243
>gi|116073070|ref|ZP_01470332.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. RS9916]
gi|116068375|gb|EAU74127.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. RS9916]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E +++ G + LC ++ G V+I+ +G+ + + P DE V++FATG+GI+P
Sbjct: 196 YEKDGETINGVCSTFLCDIEPGAKVKITGPVGK----EMLLPDDEEANVIMFATGTGIAP 251
Query: 183 IRSLIESGFSSKERS--------DVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVL 231
+R+ + F S ER L+ GA + Y D F +ES + +
Sbjct: 252 MRTYLRRMFESSEREKNGWNFRGKAWLFMGAPKTPNLLYDDDFNRYESEYPENFRYTKAI 311
Query: 232 SQPDGNWSGETGYVQA-AFSRAKKIF----NPQGTGVVLCGQKQM 271
S+ N G Y+Q A +IF +P+ T V +CG + M
Sbjct: 312 SREQQNTKGGRMYIQDRVLEHADEIFAMIEDPK-THVYMCGLRGM 355
>gi|346224059|ref|ZP_08845201.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
thermohalophila DSM 12881]
Length = 419
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 101/250 (40%), Gaps = 43/250 (17%)
Query: 73 HVSIDI----SDAPDIASSHTRAGQYLQLRVVDVG----KPTFLA--------------- 109
++ ID+ D DI G + + + D+ +PTF A
Sbjct: 173 YIQIDVPKIDVDFKDIEVEEEFRGDWEKFNMFDLKMHNPEPTFRAYSMANHPAENNIIML 232
Query: 110 ---IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPD 166
IA+PP F +G F+ L + S + K GD V IS G F D +
Sbjct: 233 NVRIATPP-FDRVNGGFQKLNPGICSS---YIFSRKPGDKVTISGPYGEFFLKDTDR--- 285
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWES--S 223
++ G+G++P+RS I F + K V +YGAR+ + + Y++ F++ E
Sbjct: 286 ---EMMFIGGGAGMAPMRSHIFHLFHTLKTDRKVSFWYGARSKREIFYEEDFRDIEKRFD 342
Query: 224 GVKIVPVLSQ--PDGNWSGETGYVQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIV 279
LS+ P+ NW G TG++ + K P+ LCG M V ++
Sbjct: 343 NFDFTIALSEPLPEDNWDGPTGFIHSVIYEKYLSKHEEPEEIEYYLCGPPMMNAAVQKML 402
Query: 280 LAEGVSSEKI 289
GV E I
Sbjct: 403 YDLGVPDEMI 412
>gi|332981478|ref|YP_004462919.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Mahella australiensis 50-1 BON]
gi|332699156|gb|AEE96097.1| oxidoreductase FAD/NAD(P)-binding domain protein [Mahella
australiensis 50-1 BON]
Length = 285
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVV 147
+ + GQ+ ++ V VG+ F +SP + G EF +K AGS + + LK+GD +
Sbjct: 47 NYKPGQFAEVSVFGVGEAPFCLASSP----TQRGYVEFSIKR-AGSVTQAIHSLKEGDTI 101
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS---DVRLYYG 204
+ G F V+ + E +L A G G++P+RSLI RS + ++
Sbjct: 102 GVRGPFGNYFPVEAM----EDKKLLFVAGGIGLAPLRSLINYVTDESHRSRFGHIMIFSA 157
Query: 205 ARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
AR+ M + ++ W+ + + + +P+ W G G+ + T
Sbjct: 158 ARSTADMTFTWEYDRWKQIRDLDVKFTIDRPETGWDGMVGFPHVLLPDMG--ISSDNTVA 215
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKIL 290
V CG M + V+ ++ G + + I+
Sbjct: 216 VTCGPPIMIKSVSKALMDMGFAPDSII 242
>gi|377579821|ref|ZP_09808782.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
hermannii NBRC 105704]
gi|377538891|dbj|GAB53947.1| Na(+)-translocating NADH-quinone reductase subunit F [Escherichia
hermannii NBRC 105704]
Length = 408
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 243 GIMSSYIWSLKAGDSVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 296
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQ 246
K + + +YGAR+L+ M YQ++F++ ++ LS P+ NW+G TG++
Sbjct: 297 GRLKTKRKISFWYGARSLREMFYQEEFEQLARDNPNFTFHVALSDPLPEDNWTGYTGFIH 356
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V +++ GV E IL
Sbjct: 357 NVLYENYLRDHPAPEDCEFYMCGPPMMNAAVIAMLKNLGVEDENIL 402
>gi|159903654|ref|YP_001550998.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str.
MIT 9211]
gi|159888830|gb|ABX09044.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str.
MIT 9211]
Length = 361
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E K++ G + LC +K GD V+I+ +G+ + + P DE +++ ATG+GI+P
Sbjct: 165 YEKDGKTIDGVCSTYLCDIKPGDKVKITGPVGK----EMLLPEDENANIIMLATGTGIAP 220
Query: 183 IRSLIESGFSSKE--------RSDVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVL 231
+R+ + F E + + L+ GA + Y F+ ++S + ++ +
Sbjct: 221 MRAYLRRMFDPTEQEKNSWNYKGNAWLFMGAPKTANLLYDSDFEGYKSKFPNNLRYTKAI 280
Query: 232 SQPDGNWSGETGYVQA-AFSRAKKIF----NPQGTGVVLCGQKQM 271
S+ N G Y+Q A +IF NP+ T + LCG K M
Sbjct: 281 SREQKNARGGRMYIQDRVLEHADEIFALIENPK-THIYLCGLKGM 324
>gi|399009147|ref|ZP_10711589.1| flavodoxin reductase family protein [Pseudomonas sp. GM17]
gi|398113424|gb|EJM03271.1| flavodoxin reductase family protein [Pseudomonas sp. GM17]
Length = 343
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 91 AGQYLQLRV-VDVGKPT-FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
AGQYL L V VD K +I+S P VK VAG + ++ L GD
Sbjct: 36 AGQYLTLEVDVDGAKGCRAYSISSTPGLDKT---LSITVKRVAGGKVSNRLVQELSAGDA 92
Query: 147 VEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
V+ GR FA P +++ A GSGI+PI S+++S + + V L YG
Sbjct: 93 VQTLGTHGRFTFAPQ----PGRGRHLVLLAAGSGITPIFSILKSALHFEPDAQVSLIYGN 148
Query: 206 RNLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQGT 261
RN + + ++DK + + +++V VLS+PD + E Q + PQ
Sbjct: 149 RNQESVIFRDKLDQLRQTFGERLQLVHVLSRPDTPGAHEGRLTRQRVIDILGALPGPQAR 208
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M +EVT+ + G++ E +
Sbjct: 209 EYYSCGPSGMMDEVTAALETLGIAPESV 236
>gi|134094001|ref|YP_001099076.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Herminiimonas
arsenicoxydans]
gi|133737904|emb|CAL60949.1| putative Ferredoxin--NAD(+) reductase [Herminiimonas
arsenicoxydans]
Length = 342
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P+ +A + + + +++ + P RAGQY++ + D GK ++A+ P
Sbjct: 104 PSRIARLERVGDDVMSIALQL---PASEKLQYRAGQYIEFMLKD-GKRRSYSLANAPHVG 159
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
++ + G T +V +K+ D++ +G F ++ + P VL+ A
Sbjct: 160 EH---VTLHIRHMPGGLFTDQVFSTMKERDILRFEGPLGSFF----LREDSDKPMVLL-A 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
+G+G +PI++++E K + LY+G R K + +EW + + VPV+S
Sbjct: 212 SGTGFAPIKAIVEQAVHIKSERPMTLYWGGRRPKDLYMHALCEEWARTIPNFRYVPVISN 271
Query: 234 P--DGNWSGETGYV-QAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
+ W+G+TG+V Q + + N Q V CG M +
Sbjct: 272 ATQEDQWNGQTGFVHQVVMNDLPDLSNYQ---VYACGAPAMVD 311
>gi|115511396|dbj|BAF34305.1| propane monooxygenase reductase [Pseudonocardia sp. TY-7]
Length = 343
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLC-GLKKGDVVEI 149
GQY+ V + ++A+ P+ G FEF++K G +E L ++ GD +E+
Sbjct: 141 GQYMDFIVPGTEESRSFSMANTPN---REGEFEFVIKIYPDGLFSEFLAEKVQVGDQLEV 197
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G F + + D ++ G+G++PI L+ S R YYGAR +
Sbjct: 198 EAPFGT-FTLRENRTSD----IVFVGGGAGMAPILGLLRSMAERGVERRARFYYGARATR 252
Query: 210 RMAYQDK---FKEWESSGVKIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + ++ E SG+ P LS PD WSG+TG + + +G +
Sbjct: 253 DLCFAEEIAALGEQLPSGLTYTPALSHPDDEPWSGQTGLITEVLQANESTL--EGADAYV 310
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M + + + A GV E I +
Sbjct: 311 CGPPPMVDAAIATLTALGVREENIFYD 337
>gi|385674685|ref|ZP_10048613.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Amycolatopsis sp. ATCC
39116]
Length = 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQYL V + ++A P+ G EF+++ G + + G+ GD +E+
Sbjct: 141 GQYLDFAVPGTDQTRSFSMAGLPT----DGHLEFVIRIYPGGLFSQFLDTGVAVGDRLEV 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYGAR 206
+ F V ++ P V + G+G++PI SL+ S + R YYGAR
Sbjct: 197 TGP----FGVFTLRDAPGAPLVFV-GGGAGMAPILSLLRSMAARGGEVAARRTTFYYGAR 251
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQP-DGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + ++ + E E + VP LS+P D +W GETG + R + + G
Sbjct: 252 RKQDLCFEAELHELEQTLPAFTYVPALSEPGDDDWDGETGLITDVVRRREA--DLAGADA 309
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+CG M E ++ A GV+ +I +
Sbjct: 310 YVCGPPPMVEAALDLLPALGVADRRIFYD 338
>gi|333374917|ref|ZP_08466747.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella kingae ATCC
23330]
gi|332974202|gb|EGK11135.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella kingae ATCC
23330]
Length = 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG-LKKGDVV 147
AGQY+++ + D G ++ +IA+ PS SG+ EF V+ G + ++ G LK G ++
Sbjct: 133 AGQYMEILLKD-GSRSY-SIANAPS---QSGSLEFHVRLHEGGLFSPQLFSGNLKSGSII 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G + + + P +L+ ATG+G +PI+S++ ++ V +Y+G R
Sbjct: 188 RLRGPLGSFYLNEE---SGDKPLILL-ATGTGFAPIKSILTHLAQTQNTRHVHVYHGTRF 243
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + E + K PVLS+P+ +W+G TGY+ R + V
Sbjct: 244 ANGLYDEAALCEVLAQLPNAKYTPVLSRPNDDWTGATGYITEHVLRDYPDLSAH--EVYA 301
Query: 266 CGQKQMAEEVTSIVLAE 282
CG M + + ++A+
Sbjct: 302 CGSPDMVRDSKAALVAQ 318
>gi|46450224|gb|AAS96872.1| hydrogenase, putative [Desulfovibrio vulgaris str. Hildenborough]
Length = 283
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+PA ++L + I DA + + GQ QL + VG+ TF+ I SPP+ +
Sbjct: 27 TPAIKTL---RVRIDDAARMDAFRFNPGQVGQLSLFGVGESTFV-INSPPT------RMD 76
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+L S+ AG L GLK GD V + +G F + ++ D ++ G G++P
Sbjct: 77 YLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPFEDMRGKD----IVFVGGGIGMAP 132
Query: 183 IRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSG 240
+R+L+ ++ + ++ L YGAR MA++D ++W S + + Q +W
Sbjct: 133 LRTLLLYMLDNRADYGNITLLYGARTPGDMAFRDDVQDWLGRSDMNTTLTVDQAPDDWPH 192
Query: 241 ETGYV 245
G +
Sbjct: 193 RAGLI 197
>gi|304569721|ref|YP_011612.2| hydrogenase [Desulfovibrio vulgaris str. Hildenborough]
gi|387154066|ref|YP_005703002.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfovibrio vulgaris RCH1]
gi|311234510|gb|ADP87364.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfovibrio
vulgaris RCH1]
Length = 295
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+PA ++L + I DA + + GQ QL + VG+ TF+ I SPP+ +
Sbjct: 39 TPAIKTL---RVRIDDAARMDAFRFNPGQVGQLSLFGVGESTFV-INSPPT------RMD 88
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+L S+ AG L GLK GD V + +G F + ++ D ++ G G++P
Sbjct: 89 YLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPFEDMRGKD----IVFVGGGIGMAP 144
Query: 183 IRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSG 240
+R+L+ ++ + ++ L YGAR MA++D ++W S + + Q +W
Sbjct: 145 LRTLLLYMLDNRADYGNITLLYGARTPGDMAFRDDVQDWLGRSDMNTTLTVDQAPDDWPH 204
Query: 241 ETGYV 245
G +
Sbjct: 205 RAGLI 209
>gi|118602747|ref|YP_903962.1| oxidoreductase FAD/NAD(P)-binding subunit [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|118567686|gb|ABL02491.1| oxidoreductase FAD/NAD(P)-binding domain protein [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 355
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ L D +P +IA+ PS S E V+ + T + L++ +++
Sbjct: 151 AGQYIDLIHPDF-EPRAFSIANAPSNTSL---IELHVRLIEDGKFTNFIFNELQEKSLLK 206
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G + ++ + ++++ G+G P++++IE +K R + +Y+G R+
Sbjct: 207 IEGPKGDFYFREKSKK-----SIILVTGGTGFGPVKAMIEHAIETKSRRMIHIYWGVRDE 261
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQGTGVVL 265
K + Y D ++W S + +PVLSQ + W G TGYV ++ + + + + + V
Sbjct: 262 KGL-YTDLPEQWAKSHENISFIPVLSQANSAWKGRTGYVHESVLADFEHLVDYE---VYA 317
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M + ++ + G+ E +
Sbjct: 318 CGPPAMVKAASNTFVKRGMFKENFFSD 344
>gi|399002605|ref|ZP_10705288.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Pseudomonas sp.
GM18]
gi|398124520|gb|EJM14028.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Pseudomonas sp.
GM18]
Length = 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSSKERS---DVRLYYGARNLKRMAYQDKFKEWESS 223
E ++ ATG+GI+P+++++E S+ + ++ +Y+G R + ++ F +
Sbjct: 200 ELKNIVFLATGTGIAPVKAMLEQMLSTPAAAAGKNIYIYWGGRTQSDIYWKPDFHALDPV 259
Query: 224 GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
+PVLS+PD +W+G TGY+Q A + + + V CG + M +++A G
Sbjct: 260 ---FIPVLSRPDSSWTGRTGYIQTAL--LEDSVDLAQSVVYACGSEDMIFSAHEVLVAAG 314
Query: 284 VSSEKILKNF 293
+S+ KNF
Sbjct: 315 LSA----KNF 320
>gi|381163706|ref|ZP_09872936.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora azurea NA-128]
gi|379255611|gb|EHY89537.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora azurea NA-128]
Length = 395
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQYL + V +P SP + A G+ EF V++V G + ++ + GDV
Sbjct: 194 RAGQYLSVEVPQ--RPRLWRCLSPANAPRADGSLEFHVRAVDGGWVSRAIVGHTRIGDVW 251
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ MGR VDR + VL+ A G+G++P+++ ++ + +V L+YGAR+
Sbjct: 252 KFGAPMGR-LHVDR----ESARPVLLIAGGTGVAPLQANLDDLGRWVDNPEVTLFYGARH 306
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-GVV 264
+ D+ + ++ + + PV+ P E G + A +R + P ++
Sbjct: 307 WDDLYALDQLYSFSATNPWLTVWPVVEDPASAPQIEHGTLAEAVTR----WGPWTEHDIL 362
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ G M E +L GV +I+ +
Sbjct: 363 VSGPPGMIESTVVALLRTGVHPSQIVYD 390
>gi|163749500|ref|ZP_02156748.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
benthica KT99]
gi|161330909|gb|EDQ01836.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
benthica KT99]
Length = 405
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD+V IS G F ++ D ++ G+G++P+RS I +
Sbjct: 240 GKMSSYIFNLKAGDMVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFNQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + + +YGAR+ + + YQD+F + + V ++ QP+ NW+G TG++
Sbjct: 294 KGVKTKRKMSFWYGARSTREVFYQDEFDKLAAENENFVWHVALSDPQPEDNWNGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ + GV E I+
Sbjct: 354 NVILENYLKNHKAPEDCEFYMCGPPIMNTSVINMLESLGVEEENIM 399
>gi|94500836|ref|ZP_01307362.1| putative Oxidoreductase [Bermanella marisrubri]
gi|94426955|gb|EAT11937.1| putative Oxidoreductase [Oceanobacter sp. RED65]
Length = 373
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 87 SHTRAGQYLQLRVVDVGK--PTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLK 142
SH AGQY++L + G + I+S P F +G E + A T ++ L
Sbjct: 73 SHEFAGQYVELIIQKDGAWVSRYFTISSSPEFFRETGTIELSIAIQANGRITPWLMKNLN 132
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERS--DV 199
KGD+V + Q MG ++ P D+ + +F A GSGI+P RS ++S S ER ++
Sbjct: 133 KGDMVNLGQPMGDFLPLNI--PRDKSVSRKVFIAGGSGITPFRSSLQSLMQSDERDTQEI 190
Query: 200 RLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNW--SGETGYVQAAFSRAKKIFN 257
L+Y AR+ + ++++ + + +L + ++ S + G+ + + +
Sbjct: 191 ELFYYARSEEHFLFREELQ-------RCAYLLPKAHVHFMDSEKIGFFDYTHLQVENK-H 242
Query: 258 PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
T +CG M + V S + GV E I F
Sbjct: 243 QTDTAFFVCGPPAMIQHVRSTLNTHGVKKENIYYEF 278
>gi|395761166|ref|ZP_10441835.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium
lividum PAMC 25724]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 15/167 (8%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGD 145
H RAGQY+++ + D + ++ ++AS P G ++ + G T +V +K+ D
Sbjct: 131 HYRAGQYIEIMLRDNKRRSY-SMASAPV---DGGPVSLHIRHMPGGLFTDQVFGSMKERD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ MG F + P V++ A+G+G +P+++++E + K + + LY+GA
Sbjct: 187 ILRFEGPMGTFFLREDSDKP-----VVLLASGTGFAPLKAIVEHMINEKSQRPITLYWGA 241
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
R + ++W + VPV+S + W G TG+V A
Sbjct: 242 RRPHDLYMDALCRQWAADLPQFTYVPVVSAALEEDAWDGRTGFVHQA 288
>gi|404378709|ref|ZP_10983794.1| hypothetical protein HMPREF9021_00786 [Simonsiella muelleri ATCC
29453]
gi|404294955|gb|EFG31516.2| hypothetical protein HMPREF9021_00786 [Simonsiella muelleri ATCC
29453]
Length = 386
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 16/197 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG-LKKGDVV 147
AGQY+++ + D G ++ +IA+ PS EF V+ G + ++ G LK G ++
Sbjct: 184 AGQYMEILLKD-GSRSY-SIANAPS---QKATLEFHVRLREGGLFSPQLFSGSLKSGAIM 238
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G + D + D+ P +L+ ATG+G +PI+S++ ++ V +Y+G R
Sbjct: 239 RLRGPLGSFYLND--ESADK-PLILL-ATGTGFAPIKSILMQLADTQPERVVHVYHGTRV 294
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + ++ ++ K PVLS+PD +WSG TGY+ R + G V
Sbjct: 295 AAGLYDETALRQLLAALPNAKYTPVLSRPDADWSGATGYITEYVLRDYA--DLSGHEVYA 352
Query: 266 CGQKQMAEEVTSIVLAE 282
CG M +++A+
Sbjct: 353 CGSPDMIHSSRQMLVAQ 369
>gi|365969144|ref|YP_004950705.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae EcWSU1]
gi|365748057|gb|AEW72284.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae EcWSU1]
Length = 407
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA + E V I G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFAKET-----EAEMVFI-GGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 296 KRLGSKRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E IL
Sbjct: 356 NVLYENYLKQHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIL 401
>gi|433646674|ref|YP_007291676.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
smegmatis JS623]
gi|433296451|gb|AGB22271.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Mycobacterium
smegmatis JS623]
Length = 350
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 92 GQYLQLRV--VDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
GQY++++V D +F ++A+PPS +S +V+ + G T++V + +G +
Sbjct: 149 GQYIEVQVPGSDDEWRSF-SMANPPSISSR---VHLVVRVIPGGRFTSQVGKEIAEGTTM 204
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ FA+ R+ Y ++ A GSGI+P+ S++ S YGAR
Sbjct: 205 KLRGPLGQ-FAI-RLS----YRPIIFIAGGSGIAPVLSMLADLIESNNERPATFLYGART 258
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ DK +E E+ +P LS PD W GETG + R + +G
Sbjct: 259 AADLPMVDKLRELENEHDWFTFIPALSDPDDTPWDGETGLITEVLKR--HFPSTKGHESY 316
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
LCG M + ++ + G I
Sbjct: 317 LCGPPAMIDAALDVLTSSGCKDRHIF 342
>gi|448411687|ref|ZP_21576043.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halosimplex
carlsbadense 2-9-1]
gi|445669621|gb|ELZ22229.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halosimplex
carlsbadense 2-9-1]
Length = 344
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 23/171 (13%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLC-GLKKGDVVE 148
AGQY+ LR G+ +++S P+ E V+ V G + LC L+ GD E
Sbjct: 113 AGQYVGLRYC--GESRAYSLSSSPT----RDTVEICVRRVPGGDLSPRLCRDLRVGD--E 164
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS------KERSDVRLY 202
++ RG V + P + VL+ ATG+G++P++ +++ F + ER DV ++
Sbjct: 165 VTMRGPRGDLV--LDEPSDRDLVLM-ATGTGVAPLKGMVDYVFDTGADEVDGERRDVWVF 221
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAF 249
GA + Y++ F+E+ E VP LS+ W+GET YVQ AF
Sbjct: 222 LGAPWEDDLPYREAFREYDREHDHFHFVPCLSRESYLSEWTGETDYVQHAF 272
>gi|418461910|ref|ZP_13032970.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora azurea SZMC 14600]
gi|359738037|gb|EHK86949.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora azurea SZMC 14600]
Length = 395
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQYL + V +P SP + A G+ EF V++V G + ++ + GDV
Sbjct: 194 RAGQYLSVEVPQ--RPRLWRCLSPANAPRADGSLEFHVRAVDGGWVSRAIVGHTRIGDVW 251
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ MGR VDR + VL+ A G+G++P+++ ++ + +V L+YGAR+
Sbjct: 252 KFGAPMGR-LHVDR----ESARPVLLIAGGTGVAPLQANLDDLGRWVDNPEVTLFYGARH 306
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-GVV 264
+ D+ + ++ + + PV+ P E G + A +R + P ++
Sbjct: 307 WDDLYALDQLYSFSATNPWLTVWPVVEDPASAPQIEHGTLAEAVTR----WGPWTEHDIL 362
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ G M E +L GV +I+ +
Sbjct: 363 VSGPPGMIESTVVALLRTGVHPSQIVYD 390
>gi|386810734|ref|ZP_10097961.1| oxidoreductase FAD/NAD(P)-binding domain protein [planctomycete
KSU-1]
gi|386406289|dbj|GAB60842.1| oxidoreductase FAD/NAD(P)-binding domain protein [planctomycete
KSU-1]
Length = 279
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 13/236 (5%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
+P+P E+ +ID+ AGQ+ L V VG+ P +
Sbjct: 10 SPSPFRIQRVQKETHDTFTIDLKPVSGTGDVSFAAGQFNMLYVFGVGEAPISLSGDPIN- 68
Query: 117 ASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
++ V+ V G + + LK+G+V+ + G + V++ D V++ A
Sbjct: 69 ---PHLYKHTVREV-GVVTKAMRKLKQGEVLGVRGPFGSHWPVEKAIGKD----VVMVAG 120
Query: 177 GSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQP 234
G G++P+R + S + + + L YGAR + + Y+ ++W E V++ +
Sbjct: 121 GIGLAPLRPAMYHLISQRNQYGKIVLLYGARTPEDILYKHDLEQWREHFDVEVQVTVDNS 180
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
DGNW G+ G V RA+ FNP ++CG + M + + G + I
Sbjct: 181 DGNWRGDVGVVTTLIRRAQ--FNPSRAIAMICGPEVMMRFTIAELQNCGAGDDNIF 234
>gi|182419728|ref|ZP_02950969.1| sulfite reductase, subunit B [Clostridium butyricum 5521]
gi|237666083|ref|ZP_04526071.1| sulfite reductase, subunit B [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376465|gb|EDT74046.1| sulfite reductase, subunit B [Clostridium butyricum 5521]
gi|237659030|gb|EEP56582.1| sulfite reductase, subunit B [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 263
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 53 TTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIAS 112
+ + + P IS ESL + + DI H GQ+++L + G+ +
Sbjct: 2 SNILSSKPCKIISINKESLHEYTFRVE--TDIVPEH---GQFMELSIPKFGE-------A 49
Query: 113 PPSFAS-ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
P S + SG +F ++SV T E+ LKKGD + + G+G+ VD+ + +
Sbjct: 50 PISVSGFGSGYMDFTIRSVGKVTDEIF-KLKKGDKIYLRGPYGKGWPVDKFKDKH----I 104
Query: 172 LIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPV 230
++ A G+G++P+RS+I E + L +G ++ + + ++++ +W+ K V
Sbjct: 105 VVVAGGTGVAPVRSMINQFLYDNEYVKSLNLLFGFKDSQGVLFKNELIKWKD---KFNTV 161
Query: 231 LSQPDGNWSG-ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + G E+G V A + K +V+ G M L GV EKI
Sbjct: 162 YTLDNEKVDGFESGLVTAHLEKVFKEEFGDNYEIVIVGPPMMMHFTALEFLKLGVPEEKI 221
Query: 290 LKNF 293
+F
Sbjct: 222 WTSF 225
>gi|239814300|ref|YP_002943210.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Variovorax paradoxus
S110]
gi|239800877|gb|ACS17944.1| oxidoreductase FAD/NAD(P)-binding domain protein [Variovorax
paradoxus S110]
Length = 354
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + ++ +P + A E ++ + G T V +K+ +++
Sbjct: 141 HAGQYVEFILRDGARRSYSMANAPHTLAEPGTGIELHLRHLPGGKFTDHVFGAMKEKEIL 200
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G F + D +++ A+G+G +PI++L+E + LY+G R
Sbjct: 201 RIEGPYGSFFLRE-----DSAKPMILLASGTGFAPIKALLEHMKFKRIDRPATLYWGGRR 255
Query: 208 LKRMAYQDKF---KEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + Y D + ++ E ++ VPV+S P+ NW+G TG+V A + + G
Sbjct: 256 PEDL-YMDAWVREQQKEMPNLRYVPVVSNATPEDNWNGRTGFVHRAV--LEDFADLSGHQ 312
Query: 263 VVLCG 267
V CG
Sbjct: 313 VYACG 317
>gi|194334924|ref|YP_002016784.1| Na(+)-translocating NADH-quinone reductase subunit F
[Prosthecochloris aestuarii DSM 271]
gi|194312742|gb|ACF47137.1| NADH:ubiquinone oxidoreductase, subunit F [Prosthecochloris
aestuarii DSM 271]
Length = 409
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 30/211 (14%)
Query: 86 SSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
+SH G ++L V P L ++PP S+ + LK GD
Sbjct: 216 ASHPAEGNVVKLNVRIATPPPKLFDSAPPGVGSS-----------------YIFNLKPGD 258
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYG 204
V IS G F D + ++ G+G++P+RS + F + K V +YG
Sbjct: 259 KVRISGPYGEFFIKDTDR------EMVYIGGGAGMAPMRSHLFHLFRTLKTTRKVSFWYG 312
Query: 205 ARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQAAF--SRAKKIFNP 258
AR+ K M Y D+F E+ + + QP+ NW G TG++ + K P
Sbjct: 313 ARSRKEMFYDDEFLAIASEFPNFSYNVALSDPQPEDNWEGPTGFIHNVLYENYLKNHEEP 372
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ +CG M V ++ GV E I
Sbjct: 373 EEIEYYMCGPPVMISSVEKMLYNLGVEKEMI 403
>gi|77362005|ref|YP_341579.1| ferredoxin-NADP reductase [Pseudoalteromonas haloplanktis TAC125]
gi|76876916|emb|CAI89133.1| Ferredoxin--NADP reductase (FNR) (Flavodoxin reductase) (FLXR)
(FLDR) (Methyl viologen resistance protein A) (DA1)
[Pseudoalteromonas haloplanktis TAC125]
Length = 247
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 28/246 (11%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + I+ +SLF ++++ P +AGQ+ +L ++D K IA S
Sbjct: 4 WVDATVKTITWWTDSLFSITVNADVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASASG--AFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A EF L+ V G + L L+ GD V I + F +D I P E +
Sbjct: 54 YVNAPDDPNLEFYLINVVDGLLSSHLAKLQPGDNVLIERRATGFFTLDEI-PASE--QLW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK---EWESSGVKIVP 229
+ +TG+ + P S+++ ++ + L +G R ++YQ+ E + +P
Sbjct: 111 MLSTGTALGPFLSMLQQSEVWQKYQHINLVHGVRLNDDLSYQELINTLLEAHPKQLNYIP 170
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFN-------PQGTGVVLCGQKQMAEEVTSIVLAE 282
V+S+ N G G + A + K++F+ P+ ++CG QM ++ T +++++
Sbjct: 171 VVSREQAN-VGLHGRITDAIAN-KQLFSHVGLDATPENAQFMICGNPQMVKDTTELLISQ 228
Query: 283 GVSSEK 288
+
Sbjct: 229 NYQRNR 234
>gi|226945138|ref|YP_002800211.1| multi-component phenol hydoxylase, reductase subunit LapP
[Azotobacter vinelandii DJ]
gi|226720065|gb|ACO79236.1| Multi-component phenol hydoxylase, reductase subunit; LapP
[Azotobacter vinelandii DJ]
Length = 353
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 80 DAPDIASSHTRAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAE 136
DAP+ +AGQY+ L + + +G F +IAS P A G E ++ V G T
Sbjct: 127 DAPE--GMCFQAGQYVNLALPEGIGSRAF-SIASAPQ---AGGEIELNIRIVPGGRGTGY 180
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
V L GD + +S GR F P V+ A GSG+S R++I +
Sbjct: 181 VHERLAVGDRLSVSGPYGRFFVKKSADLP-----VIFMAGGSGLSSPRAMILDLLAEGFA 235
Query: 197 SDVRLYYGARNLKRMAYQDKF--KEWESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSRA 252
+ L YG RN + + Y D+F E + + VP LS +P+G +W G G+V A A
Sbjct: 236 KPITLVYGQRNREELYYHDEFLALEQRHANFRYVPALSHEPEGSDWRGFRGFVHEA---A 292
Query: 253 KKIFNP--QGTGVVLCGQKQMAEEVTSIVL 280
++ F +G LCG M + ++
Sbjct: 293 RECFGNDFRGHKAYLCGPPLMIDSCIDTLM 322
>gi|404257271|ref|ZP_10960598.1| putative phenol hydroxylase reductase component [Gordonia
namibiensis NBRC 108229]
gi|403404265|dbj|GAB99007.1| putative phenol hydroxylase reductase component [Gordonia
namibiensis NBRC 108229]
Length = 340
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 23/191 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++L V + ++A+PPS EF ++ G A + L GD V
Sbjct: 135 AGQYVELAVPGTAETRPYSMANPPS---EPDKLEFHIRRQPGGLATEGWIFQTLDVGDPV 191
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G D PDE +++ A G+G++P++++ + ++ ++ +Y+G R
Sbjct: 192 TMSGPWG-----DFCFEPDESAGLILLAGGTGLAPLKAIARAALAADPDREIHVYHGVRT 246
Query: 208 LKRMAYQDKFKEWES-----SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ Y F WE GV+ +P LS+ WSG TGYV A + I + +
Sbjct: 247 RAEL-YDVDF--WEGLAAAHPGVRYIPCLSRE--QWSGRTGYVGDAM--MEDIASCRNHA 299
Query: 263 VVLCGQKQMAE 273
LCG M E
Sbjct: 300 AYLCGPPAMVE 310
>gi|430806773|ref|ZP_19433888.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus sp. HMR-1]
gi|429500911|gb|EKZ99263.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus sp. HMR-1]
Length = 351
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIATPPH---EEGPIELHIRHMPGGAFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI++++E + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIVEHAAYTGITRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + ++W K VPV+S Q + NW+G TG+V A
Sbjct: 245 WGGRRPRDLYMHALCEQWARDLPNFKYVPVVSDAQAEDNWTGRTGFVHQA 294
>gi|91794246|ref|YP_563897.1| oxidoreductase FAD/NAD(P)-binding [Shewanella denitrificans OS217]
gi|91716248|gb|ABE56174.1| oxidoreductase FAD/NAD(P)-binding [Shewanella denitrificans OS217]
Length = 253
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 38/253 (15%)
Query: 55 VWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPP 114
+WT + + LF +SI AP IA GQ+++L V K +A
Sbjct: 1 MWTQGLVVARRDWNDKLFTLSIKAEIAPFIA------GQFIKLSQVLADK----RVARAY 50
Query: 115 SFASASGA--FEFL-VKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S SA A E L +K AG + L L GD + +S +D + +Y +
Sbjct: 51 SIVSAPDAELLEVLAIKVEAGQLSPALHQLAIGDAITVSTKAAGFLTLDELPQSADYSNL 110
Query: 172 LIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVK---IV 228
ATG+G+ P S++ + + + L YG +AY D ++ K +
Sbjct: 111 WFLATGTGVGPFISMLRTQAPWLKYEKIILVYGVSYQTDIAYHDVIQQLLLQYPKQFVFI 170
Query: 229 PVLSQ----------------PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMA 272
P++++ P G SGE +RA+ NPQ + V++CG +M
Sbjct: 171 PMVTRDPEASVSMANALHCRIPQGLVSGELE------TRAQVDINPQSSQVMICGNPEMI 224
Query: 273 EEVTSIVLAEGVS 285
EV +++L G+S
Sbjct: 225 SEVQTLLLERGLS 237
>gi|34499239|ref|NP_903454.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Chromobacterium
violaceum ATCC 12472]
gi|34105090|gb|AAQ61446.1| NAD(P)H-flavin reductase [Chromobacterium violaceum ATCC 12472]
Length = 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF-EFLVKSV-AGSTAE-VLCGLKKGDV 146
RAGQY+ + + D GK +IA+ P AF E ++ GS +E V +K+ ++
Sbjct: 132 RAGQYIDILMKD-GKKRSFSIANAPH----DDAFLELHIRHQPGGSFSEYVFHQMKEREI 186
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ MG F ++ + P VLI A+G+G +P++ +IE ++ Y+GAR
Sbjct: 187 MRFKGPMGSFF----LREESDKPIVLI-ASGTGFAPVKGIIEHAIHHGITRPMQFYWGAR 241
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + + W ++ ++ +PVLS+ P+ W+G TG+V A + + G
Sbjct: 242 TKADLYMSELAEGWAAAHPNIRYIPVLSEALPEDGWTGRTGFVHQAV--LEDFADLSGHQ 299
Query: 263 VVLCGQKQMAEEVTSIVLAE 282
V CG M E + E
Sbjct: 300 VYACGAPVMVEAAHGTFIRE 319
>gi|388565268|ref|ZP_10151762.1| Ferredoxin--NAD(+) reductase [Hydrogenophaga sp. PBC]
gi|388267541|gb|EIK93037.1| Ferredoxin--NAD(+) reductase [Hydrogenophaga sp. PBC]
Length = 329
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLC-GLKKGDVVE 148
RAGQYLQ+++ D G+ ++A+PP S + V+ VAG L GL+ GD ++
Sbjct: 128 RAGQYLQVQLPD-GEQRSYSMANPPH---ESDGVQLHVRHVAGGRFSALAPGLQPGDTLD 183
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G+ I P + P +L G+G +P++SL++ K V L +GAR+
Sbjct: 184 VELPFGQ----VEIDPASDRP-LLCVCGGTGFAPVKSLLDHLLRQKSTRPVTLVWGARDR 238
Query: 209 KRMAYQDKFKEWESS--GVKIVPVL-SQPDGN-WSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + ++W + VP L ++ D G G V A QG V
Sbjct: 239 SGLYLLEHVQKWARGLPDWRFVPALENEADAQALQGHHGRVDTAVRAVADDL--QGAEVY 296
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M V + A G+ E+
Sbjct: 297 CCGAPAMVSAVRAQCAALGLPPERF 321
>gi|73539507|ref|YP_299874.1| ferredoxin:oxidoreductase FAD/NAD(P)-binding subunit [Ralstonia
eutropha JMP134]
gi|72122844|gb|AAZ65030.1| phenol 2-monooxygenase P5 subunit [Ralstonia eutropha JMP134]
Length = 354
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ + + +G+ +IA+ P+ + +G V+ V G T + ++ GD +
Sbjct: 133 QAGQYVMVEIPGLGQQRAFSIANAPAEVAETGEIALQVRRVPGGAGTGVLHEQVQVGDAL 192
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ GR F P +L A GSG+S RS+I + + L G R+
Sbjct: 193 RVTGPYGRFFVRQSAGMP-----MLFVAGGSGLSSPRSMILDLLAGGCPLPITLINGQRS 247
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLS-QP-DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L+ + D+F + + + VPVLS +P D +W G GY A A+ +F+ Q G
Sbjct: 248 LEELYGHDEFVDLAARHPNFQYVPVLSGEPEDSDWRGARGYAHDA---ARTLFDGQFAGH 304
Query: 262 GVVLCGQKQMAEEVTSIVL-----AEGVSSEKIL 290
LCG M E ++ E + +EK L
Sbjct: 305 KAYLCGPPPMVEATIGTLMQGRLFEEDIYTEKFL 338
>gi|451980331|ref|ZP_21928727.1| putative Nickel-dependent hydrogenase, gamma subunit [Nitrospina
gracilis 3/211]
gi|451762501|emb|CCQ89958.1| putative Nickel-dependent hydrogenase, gamma subunit [Nitrospina
gracilis 3/211]
Length = 282
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
+ GQ+ L V VG+ P S + + L+ ++ G+ L L+KGDV+
Sbjct: 46 KPGQFNMLYVFGVGE-------VPISISGDPQKPDTLLHTIRAVGTVTRHLKNLRKGDVI 98
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGAR 206
I G + V+ ++ D V+ A G G++P+R I + +E+ DV + YGAR
Sbjct: 99 GIRGPFGSHWPVEAVEGND----VVFIAGGIGLAPLRPAIYQVLARREKYGDVFILYGAR 154
Query: 207 NLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
M ++ + ++W +++ + W G G V +AK F+ T ++
Sbjct: 155 TPADMIFRKELEQWRGRFDLEVDATVDTAQRGWLGNVGVVTQIVRKAK--FDAHQTVAMI 212
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M + ++ EG+S + I
Sbjct: 213 CGPEVMMRFTVNELMDEGLSPDDI 236
>gi|90408661|ref|ZP_01216813.1| NAD(P)H-flavin reductase [Psychromonas sp. CNPT3]
gi|90310237|gb|EAS38370.1| NAD(P)H-flavin reductase [Psychromonas sp. CNPT3]
Length = 231
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST--AEVLCGLKKGDVV 147
+AGQYL + + + K F +IA+ P S E + + +T +V+ ++ VV
Sbjct: 32 KAGQYLSVLMGEKDKRHF-SIANAP----LSECIELHIGATPENTYAMQVIEKMQNEGVV 86
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G F ++ P +++ A G+G S ++SL+E K + V LY+G +
Sbjct: 87 DVEIGLGEAFLREKSTRP-----IILMAGGTGFSYVKSLLEQIVILKLTNPVYLYWGVKE 141
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ ++ +W + + V PV+ QP+ +W G GYV A N + +
Sbjct: 142 YAHFYFDEQASQWAKQHNNVHFHPVVEQPEVDWQGHQGYVHQAVLNDFSELN--AFDIYI 199
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G+ +MA+ + +G + I
Sbjct: 200 VGRFEMAKIAREDFIKQGAQKDHI 223
>gi|392977761|ref|YP_006476349.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392323694|gb|AFM58647.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHI--- 291
Query: 191 FSSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGET 242
F +R + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G T
Sbjct: 292 FDQLKRLGSQRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHT 351
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + K+ P+ +CG M V ++ GV E IL
Sbjct: 352 GFIHNVLYENYLKQHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIL 401
>gi|390573981|ref|ZP_10254132.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia terrae
BS001]
gi|389934003|gb|EIM95980.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Burkholderia terrae
BS001]
Length = 222
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + + D + ++ +IA PP S + E ++ G T +V L ++
Sbjct: 12 RAGQYIDILLPDGVRRSY-SIAVPPDPVSLT-HIELHIRHHPGGRFTEQVFSELATRQML 69
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F + P V++ A G+G +P+++++E + +Y+G R
Sbjct: 70 RFEGPYGAFFLREATGKP-----VILLAGGTGFAPVKAIVEYALQRGSAREFHIYWGGRR 124
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + D +W + V VPVLS+P D +W+G TG+V A + G V
Sbjct: 125 RRDLYLADLPYKWAEDHPNVHFVPVLSEPGMDCDWTGRTGWVHQAV--VDDFPDLSGYEV 182
Query: 264 VLCGQKQM 271
CG M
Sbjct: 183 YACGAPAM 190
>gi|449467281|ref|XP_004151352.1| PREDICTED: Na(+)-translocating NADH-quinone reductase subunit
F-like [Cucumis sativus]
gi|295096895|emb|CBK85985.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y D+F++ ++ LS QP+ NW+G TG++
Sbjct: 296 KRLGSKRKISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E I+
Sbjct: 356 NVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|409124174|ref|ZP_11223569.1| PaaE-like NADH oxidoreductase [Gillisia sp. CBA3202]
Length = 348
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 24/242 (9%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLA--IASPPSFAS 118
+ EI E +S D+ D+ S +AGQY+ L+ GK A + S P+
Sbjct: 9 IKEIIRETEQAVSISFDVPDSLKELFSF-KAGQYITLKTTIEGKEVRRAYSLCSAPN--- 64
Query: 119 ASGAFEFLVKSVAGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
+ ++ VK V G T VL LK GDV+E+ G+ +P + F
Sbjct: 65 -TNEYKVTVKEVEGGTFSVLANNKLKSGDVLEVHPPEGKFI----FEPSNTKHNYAAFVA 119
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--------ESSGVKIV 228
GSGI+P+ S+I++ + + S L YG + + FKE E ++ V
Sbjct: 120 GSGITPVLSIIKTALTKETDSKFVLVYGNKTPDDTIF---FKELLKLQLEYPERLFIEFV 176
Query: 229 PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+Q D G + K LCG + M + V+ ++L G+ +K
Sbjct: 177 YSRTQEDNAHFGRIENSTVNYVLKNKFDALDFEKFYLCGPEVMIDSVSEVMLKNGIEKDK 236
Query: 289 IL 290
IL
Sbjct: 237 IL 238
>gi|119357952|ref|YP_912596.1| oxidoreductase FAD/NAD(P)-binding subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119355301|gb|ABL66172.1| oxidoreductase FAD/NAD(P)-binding domain protein [Chlorobium
phaeobacteroides DSM 266]
Length = 274
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 19/226 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF + I D + + GQ++ L + G P S +S+ EF+
Sbjct: 21 EKLF--QLHIVDPQERRIFRFKPGQFIMLELPGYGD-------VPISISSSYSNHEFIEL 71
Query: 129 SV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
+ AG L + G V I G F +D I VL+ A G GI+P+R+
Sbjct: 72 CIRKAGHVTSALFRTEPGMHVAIRGPFGSSFPMDEIAGHH----VLLVAGGLGIAPLRAP 127
Query: 187 IESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGY 244
+ ++R DV L YGAR ++ + +F EW + S V++ ++ D W G TG
Sbjct: 128 LFWINEHRDRFRDVHLLYGAREPSQLLFSYQFDEWNTISHVRLHTIVEHSDETWKGRTGM 187
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ F + + + T ++CG M + V S + G+ ++
Sbjct: 188 ITELFRDIE--IDTKNTYAIVCGPPIMFKFVCSYLDRLGIPMNRMF 231
>gi|407786538|ref|ZP_11133683.1| multidomain oxidoreductase [Celeribacter baekdonensis B30]
gi|407201259|gb|EKE71260.1| multidomain oxidoreductase [Celeribacter baekdonensis B30]
Length = 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 16/202 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ + V G +IAS P E ++++ G TA ++ LK G+VV +
Sbjct: 149 GQYVDV-VTQSGATRSFSIASAPD----ETMIELHIRTIPGGMFTAGIVPALKCGEVVAL 203
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G + R++ D P VL+ ATG+GI+P+R+++ + + V LY+G R
Sbjct: 204 HGPHG----LFRLRLDDFRPLVLV-ATGTGIAPLRAMLAALKGDPDCPPVALYWGMREES 258
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ D+ ++ VPVLS+ +WSG GYVQ A + + + + LCG
Sbjct: 259 ELYLADEIATLGAALEDFTFVPVLSRAAESWSGRRGYVQDAV--LEDLPDLSEHALYLCG 316
Query: 268 QKQMAEEVTSIVLAEGVSSEKI 289
M L G S I
Sbjct: 317 SPAMIGAARGRFLEAGASVNHI 338
>gi|254489037|ref|ZP_05102242.1| oxidoreductase FAD/NAD(P)-binding domain protein [Roseobacter sp.
GAI101]
gi|214045906|gb|EEB86544.1| oxidoreductase FAD/NAD(P)-binding domain protein [Roseobacter sp.
GAI101]
Length = 434
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGA---FEFLVKSVAGSTAEVLCGLKKGDVV 147
AGQ++ L +VG F +P S +S A F++K G L +K G
Sbjct: 238 AGQFVWL---NVGHSPFSLKENPFSLSSTPAARPTISFMIKEF-GDFTRTLGQIKPGTAA 293
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G +R +P + + A G G++P+ ++ + + ++RL YG R
Sbjct: 294 YLDGPFGHLSVENRTEP-----GIALIAGGVGLAPLLGILRHLRLTGDPREIRLVYGNRT 348
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG---VV 264
++AY D E + VLS P +W G TG + AA +F+ Q V
Sbjct: 349 EDQIAYSD-----ELGAQDVTYVLSAPPPDWQGATGIIDAAL--MDHVFSTQQYKEWVFV 401
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKIL 290
LCG M + V + +L GV S +IL
Sbjct: 402 LCGPPVMMDIVENHLLKCGVPSHRIL 427
>gi|169599046|ref|XP_001792946.1| hypothetical protein SNOG_02336 [Phaeosphaeria nodorum SN15]
gi|111069428|gb|EAT90548.1| hypothetical protein SNOG_02336 [Phaeosphaeria nodorum SN15]
Length = 1062
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 32/253 (12%)
Query: 53 TTVWTPTPLAEISPAAESLFHVSIDISDA-PDIA---SSHTRAGQYLQ----LRVVDVGK 104
T W P L + P ++ + ++ D PD+ H + G +LQ +R K
Sbjct: 791 THRWVPVKLIDRKPLSDDTRAYTFELPDGKPDLGLGTCQHVQLGFHLQDRMLIRSYTPTK 850
Query: 105 PTFLAIASPPSFAS------ASGAFEFLVKSV-------AGSTAEVLCGLKKGDVVEI-- 149
P ++ + A SG FE VK+ G+ + +L + G+ +EI
Sbjct: 851 PLLPDSSNQTTNADDHGTHDGSGTFELTVKTYFPTDAQPGGAMSNILDCMPIGEEIEIRG 910
Query: 150 --SQVMGRGFAVDRIQPPD-EYPTVLIFATGSGISPIRSLIESGF-SSKERSDVRLYYGA 205
+++ G +I + ++ + + GSGI+P SLI SS + +++R+
Sbjct: 911 PTGEIVYNGNGSFKISGKEYKFNKINLILGGSGITPGYSLIARALLSSDDETEIRVVDAN 970
Query: 206 RNLKRMAYQDKFKEWESSG---VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP-QGT 261
++ K + +D+ ++E +KI VLS P W G G+V + + +F P + T
Sbjct: 971 KSEKDILLKDELDKFEKDSDGRLKITHVLSHPSNEWKGTKGHVNEDIIK-ESLFEPGEKT 1029
Query: 262 GVVLCGQKQMAEE 274
GV LCG M ++
Sbjct: 1030 GVFLCGPPAMIQK 1042
>gi|421891063|ref|ZP_16321892.1| putative Ferredoxin--NAD(+) reductase [Ralstonia solanacearum
K60-1]
gi|378963587|emb|CCF98640.1| putative Ferredoxin--NAD(+) reductase [Ralstonia solanacearum
K60-1]
Length = 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDAQPEDAWTGRTGFVHQA 294
>gi|302036094|ref|YP_003796416.1| putative FMN reductase [Candidatus Nitrospira defluvii]
gi|300604158|emb|CBK40490.1| putative FMN reductase [Candidatus Nitrospira defluvii]
Length = 235
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 85 ASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE--FLVKSV--AGSTAEVLCG 140
AS +AGQ++ V G+ + P S AS+ G + LV ++ G + L G
Sbjct: 29 ASITFKAGQFVSFEVPKAGQSR--PLTRPYSIASSPGQRDRILLVLNLVQGGPGSSYLFG 86
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L++G+ G + D D +L ATG+GI+P+RS+I + + V
Sbjct: 87 LREGERTSFKGPAGAFYLRD-----DGARDLLFVATGTGIAPLRSMILAQLVRGDSRSVT 141
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
L +G R+ + + +Q++ + V +LS+P+ W GE G V A +I +
Sbjct: 142 LVWGVRSQRDLYWQEELTALAADHPNFFSVTMLSRPEPGWQGERGRVTAWVD--ARISSV 199
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGV 284
V LCG M ++VT+ + A+G+
Sbjct: 200 SKLAVYLCGGSGMIKDVTAGLNAKGL 225
>gi|73670683|ref|YP_306698.1| xylene monooxygenase electron transfer component [Methanosarcina
barkeri str. Fusaro]
gi|72397845|gb|AAZ72118.1| xylene monooxygenase electron transfer component-like protein
[Methanosarcina barkeri str. Fusaro]
Length = 232
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASA-SGAFEFLVKSVAGS-TAEVLCGLKKGDVVEI 149
GQY+ L + D + + P + +S+ + F + K + G + L LK GD V I
Sbjct: 33 GQYVVLDLSDKS----IQMKKPFTLSSSPTEDFLEITKKLTGHPFSNALTELKSGDRVVI 88
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+ G+ F + +EY + + + G GI+P+RS+I+ K ++ L Y R
Sbjct: 89 NGPYGK-FTIQ-----EEYNNIGMLSGGIGITPLRSIIKYSIDKKISCNIILIYSNRYET 142
Query: 210 RMAYQDKFK--EWESSGVKIVPVLSQPDGNWSGETGYVQAAF------SRAKKIFNPQGT 261
+A++D+ + + E+ +K++ +++P+ W G TG + A K+IF
Sbjct: 143 DIAFKDELELIQKENPNIKVIDTITKPELTWKGTTGRINAEMIQRYIPDYRKRIF----- 197
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG +M + S++ V E+I
Sbjct: 198 --FTCGPMEMVNSMVSLLKKLEVPEEQI 223
>gi|398832469|ref|ZP_10590628.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Herbaspirillum
sp. YR522]
gi|398223245|gb|EJN09595.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Herbaspirillum
sp. YR522]
Length = 347
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY++ + D GK ++AS P G ++ + G T +V +K+ D++
Sbjct: 133 KAGQYVEFMLRD-GKRRSYSMASAPH---VDGPMTLHIRHLPGGLFTDQVFGTMKQRDIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I +G F + P +++ A+G+G +PI++++E + V LY+G R
Sbjct: 189 RIEGPLGTFFLREDSDKP-----IVLLASGTGFAPIKAIVEQLEHAGSTRPVTLYWGGRR 243
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ + ++W +S VPV+S + NWSG TG+V A
Sbjct: 244 PQDLYMSQLCEQWAASLPAFTYVPVVSNAAAEDNWSGRTGFVHQA 288
>gi|389769785|ref|ZP_10191939.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Rhodanobacter sp. 115]
gi|388429951|gb|EIL87169.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Rhodanobacter sp. 115]
Length = 368
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQYL + +++ G+ +IA+ P A GA E V+ VAG T+ V L+ GD + I
Sbjct: 152 GQYLDV-LLEEGRRRPFSIANGPQ---ADGAIELHVRHVAGGGFTSWVADRLQVGDTLRI 207
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G A + + P ++ A G+G +P+++++E R ++ +Y+GARN
Sbjct: 208 EGPLGTLVAREDSERP-----MVFMAGGTGFAPVKAIVEHFIELGTRREMDVYWGARNAA 262
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPD 235
+ +++ + W + ++ PVLS+PD
Sbjct: 263 DLYLREEVEGWAARLPNLRFHPVLSEPD 290
>gi|334123323|ref|ZP_08497349.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
hormaechei ATCC 49162]
gi|333390807|gb|EGK61936.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
hormaechei ATCC 49162]
Length = 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y D+F++ ++ LS QP+ NW+G TG++
Sbjct: 296 KRLGSKRKISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E I+
Sbjct: 356 NVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|157375414|ref|YP_001474014.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Shewanella sediminis HAW-EB3]
gi|157317788|gb|ABV36886.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Shewanella sediminis HAW-EB3]
Length = 639
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 108 LAIASPPSFASASGAFEFLVKSVA-----------GSTAEVLCGLKKGDVVEISQVMGRG 156
LA + S A+ G + LV +V G + +C L G+ +E
Sbjct: 416 LACSRNYSLANGDGQSDELVFTVKIQTSPNERVKPGIGSSYICNLAPGETIEAVGPFEEF 475
Query: 157 FAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS-DVRLYYGARNLKRMAYQD 215
+A+ P P VLI A GSG++P+++LIE S ++ Y+GAR + Y +
Sbjct: 476 YAL----PSSSKPMVLIGA-GSGMAPLKALIEEQLIKNSSSRELYFYFGARRQIDLIYSE 530
Query: 216 KFKEWESS--GVKIVPVLSQPDGNWSGETGYVQ 246
F++ +PVLS+P+ +W G TGYVQ
Sbjct: 531 HFQQLSDQYPNFHYLPVLSRPEQDWCGATGYVQ 563
>gi|419960258|ref|ZP_14476301.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. cloacae GS1]
gi|388604847|gb|EIM34074.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
cloacae subsp. cloacae GS1]
Length = 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GVMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y D+F++ ++ LS QP+ NW+G TG++
Sbjct: 296 KRLGSKRKISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V ++ GV E I+
Sbjct: 356 NVLYENYLKQHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|374854677|dbj|BAL57553.1| oxidoreductase FAD/NAD(P)-binding domain protein [uncultured
candidate division OP1 bacterium]
gi|374856122|dbj|BAL58976.1| oxidoreductase FAD/NAD(P)-binding domain protein [uncultured
candidate division OP1 bacterium]
Length = 288
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEI 149
GQ+ L + VG+ P S + E LV ++ G+ + LC LK GD+V +
Sbjct: 53 GQFNMLYLFGVGE-------VPISISGDPAHPEILVHTIRAVGTVTKPLCKLKPGDIVGV 105
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNL 208
G + V D ++I A G G++P+R I + + E + L YGAR
Sbjct: 106 RGPFGSSWPVVEAAGND----IVIVAGGVGLAPLRPAIYHILNHRGEYGRIALLYGARTP 161
Query: 209 KRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
M Y+ + EW V++ ++P+ W G G V RA F+P ++
Sbjct: 162 SDMLYKKELAEWRGRFDVQVEVTVDAARPE-EWQGNVGVVTTLIPRAH--FDPHHVTALV 218
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M + G+ E+I
Sbjct: 219 CGPEIMMRFTILELQKRGLRDEQI 242
>gi|374852600|dbj|BAL55529.1| oxidoreductase FAD/NAD(P)-binding domain protein [uncultured
candidate division OP1 bacterium]
Length = 288
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEI 149
GQ+ L + VG+ P S + E LV ++ G+ + LC LK GD+V +
Sbjct: 53 GQFNMLYLFGVGE-------VPISISGDPAHPEILVHTIRAVGTVTKPLCKLKPGDIVGV 105
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNL 208
G + V D ++I A G G++P+R I + + E + L YGAR
Sbjct: 106 RGPFGSSWPVVEAAGND----IVIVAGGVGLAPLRPAIYHILNHRGEYGRIALLYGARTP 161
Query: 209 KRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
M Y+ + EW V++ ++P+ W G G V RA F+P ++
Sbjct: 162 SDMLYKKELAEWRGRFDVQVEVTVDAARPE-EWQGNVGVVTTLIPRAH--FDPHHVTALV 218
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M + G+ E+I
Sbjct: 219 CGPEIMMRFTILELQKRGLRDEQI 242
>gi|297618222|ref|YP_003703381.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Syntrophothermus lipocalidus DSM 12680]
gi|297146059|gb|ADI02816.1| oxidoreductase FAD/NAD(P)-binding domain protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 277
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 119 ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
A EF ++ V G + L ++ G + + G GF V E +L G
Sbjct: 67 ADDHLEFAIRRV-GVLTDALHEIEIGQKIGVRGPYGNGFPVKEC----EGKNMLFIGGGI 121
Query: 179 GISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQ-DKFKEWESS-GVKIVPVLSQPD 235
G++P+RS I+ F ++E+ +++ YGAR++ + ++ + F+EW + ++ + +P+
Sbjct: 122 GLAPLRSFIKYCFQNREKYGKIQILYGARSVADLCFKRELFEEWPAQPDTQVFTTIDRPE 181
Query: 236 GNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
W G+ +V +PQ T V+CG M + V + G S E+++
Sbjct: 182 PGWDGKVAFVPTYLEELNP--SPQDTIAVICGPPIMIKLVLKSMEKMGFSDEQVI 234
>gi|332535211|ref|ZP_08411017.1| ferredoxin--NADP(+) reductase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332035376|gb|EGI71877.1| ferredoxin--NADP(+) reductase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 247
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 26/245 (10%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + ++ +E+LF ++++ + P +AGQ+ +L ++D K IA S
Sbjct: 4 WVEATVKNVTWWSETLFSLTVNANVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A + EF L+ + G + L L+ GD V I Q F +D I D+ +
Sbjct: 54 YVNAPENPDLEFYLINVIDGLLSPRLATLQPGDTVLIEQHATGFFTLDEIPQSDQ---LW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW---ESSGVKIVP 229
+ TG+ I P S+++ K+ + L +G R ++YQ E + + +P
Sbjct: 111 MLGTGTAIGPFLSILQQPDVWKKYKTINLVHGVRFNNDLSYQALINELLRVYPAQLNYIP 170
Query: 230 VLSQPDGNWSGETGYVQAA------FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
V+S+ + G +G + A F K P ++CG QM ++ T+++L +
Sbjct: 171 VVSREEP-LQGLSGRITNAIESNRLFEYVKLNPEPSNAQFMICGNPQMVKDTTALLLDKN 229
Query: 284 VSSEK 288
+ +
Sbjct: 230 FTRNR 234
>gi|445425047|ref|ZP_21437126.1| oxidoreductase, FAD-binding domain protein [Acinetobacter sp.
WC-743]
gi|444753700|gb|ELW78338.1| oxidoreductase, FAD-binding domain protein [Acinetobacter sp.
WC-743]
Length = 353
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY+ L + +V +IA+ PS + E ++ V G T + LK GD +
Sbjct: 133 QAGQYINLHIPNVEGTRAFSIANSPS---ETNIIELHIRKVEGGQGTQYIHEQLKLGDKL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F ++ D+ V+ A GSG+S +S+I ++ + L+ GAR+
Sbjct: 190 ALSGPYGQFF----VRKSDQ-QNVIFIAGGSGLSSPQSMIMDLLEQGDQRIIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAAFSRAKKIFNPQGTGV 263
L + ++KF++ E + +P L+ P +W+G TG+V A + + G
Sbjct: 245 LAELYNREKFEQLVKEYPNFRYIPALNAPKSADDWTGFTGFVHEAVANYFE-HKCGGHKA 303
Query: 264 VLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 304 YLCGPPPMIDAAISTLM 320
>gi|404318291|ref|ZP_10966224.1| oxidoreductase FAD/NAD(P)-binding subunit [Ochrobactrum anthropi
CTS-325]
Length = 342
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASAS----GAFEFLVKSVAGS-TAEVLCG-LKKG 144
AGQY Q+R G P S++ A+ G+ EF V+ VAG T+E + G LK G
Sbjct: 135 AGQYAQIRFT--GTPM-------RSYSMANRVGEGSLEFHVRRVAGGITSEHIHGALKSG 185
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
D VE+ +G + P +L A GSG++PI+S++E+ + + + +Y+G
Sbjct: 186 DKVELEFPLGSSYLRQNHSGP-----MLCIAGGSGLAPIKSIVETALAHGMKQPIHVYFG 240
Query: 205 ARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
AR+ + + F+ + + + V VLS+ + G+V A A + + G
Sbjct: 241 ARSECDLYLVEHFQSLAEQYANLTFVVVLSEAEATQY-RCGFVTKAV--ADDLMDLDGWK 297
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ G M + + LA G+ E +
Sbjct: 298 AYVAGSPGMVDAAIQLALARGLRVEDM 324
>gi|332526032|ref|ZP_08402170.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Rubrivivax
benzoatilyticus JA2]
gi|332109875|gb|EGJ10503.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Rubrivivax
benzoatilyticus JA2]
Length = 347
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D G +IA+ P A E ++ + G T V +K+ +++
Sbjct: 133 RAGQYVEFILRD-GVRRAYSIANAPQQLGEPPAIELHIRHMPGGRFTDHVFGAMKEREIL 191
Query: 148 EISQVMGRGF-AVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ +G F D +P +++ A+G+G +P+++++E K V LY+G R
Sbjct: 192 RLEGPLGSFFLRTDSTKP------IVLLASGTGFAPVKAILEQMRLEKIERPVVLYWGCR 245
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ D E ++ ++ VPVLS+P D W G TG+V A + G
Sbjct: 246 RRADLYRHDWCVEAAAAMPNLRYVPVLSEPTADDAWDGRTGFVHQAV--MADWPDLSGHQ 303
Query: 263 VVLCGQKQMAE 273
V CG M E
Sbjct: 304 VYACGTPAMVE 314
>gi|261380506|ref|ZP_05985079.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria subflava NJ9703]
gi|284796759|gb|EFC52106.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria subflava NJ9703]
Length = 334
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-KSVAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G + + K G +E++ G +K+
Sbjct: 131 AGQYIDLLLPGNISRSY-SIANSPD---QEGVLDLHIRKRENGVCSEMIFGAEPKIKEKG 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V + +G F + + D +++ ATG+G +PIRS++ V Y+GA
Sbjct: 187 IVRVKGPLGT-FTLQQ----DSNKPIVLLATGTGYAPIRSILLDLIHQNSERQVHFYWGA 241
Query: 206 RNLKRM-------AYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
R + + A D+ K K PVLS+PD +W GE GYVQ A+ +
Sbjct: 242 RQQEDLYALEEAEALIDRLK-----NAKFSPVLSKPDSDWKGENGYVQNV--AAQNYPDL 294
Query: 259 QGTGVVLCGQKQMAEEVTSIV 279
V CG M E S++
Sbjct: 295 SQYEVYACGSPAMTESAQSLL 315
>gi|383759257|ref|YP_005438242.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Rubrivivax gelatinosus IL144]
gi|381379926|dbj|BAL96743.1| oxidoreductase FAD/NAD(P)-binding domain protein [Rubrivivax
gelatinosus IL144]
Length = 347
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D + + ++A+ P A E ++ + G T V +K+ +++
Sbjct: 133 RAGQYVEFILRDGARRAY-SVANAPQQLGEPPAIELHIRHMPGGKFTDHVFGAMKEREIL 191
Query: 148 EISQVMGRGF-AVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ +G F D +P V++ A+G+G +P+++++E K V LY+G R
Sbjct: 192 RLEGPLGSFFLRTDSAKP------VVLLASGTGFAPVKAILEQMRLEKIDRPVVLYWGCR 245
Query: 207 NLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ D E ++ ++ VPVLS+P D W G TG+V A + G
Sbjct: 246 RRADLYRHDWCVEAAAAMPNLRYVPVLSEPTADDAWDGRTGFVHQAVM--ADWPDLSGHQ 303
Query: 263 VVLCGQKQMAE 273
V CG M E
Sbjct: 304 VYACGTPAMVE 314
>gi|393777565|ref|ZP_10365856.1| cdp-6-deoxy-delta- -glucoseen reductase [Ralstonia sp. PBA]
gi|392715362|gb|EIZ02945.1| cdp-6-deoxy-delta- -glucoseen reductase [Ralstonia sp. PBA]
Length = 353
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCGLKKG----- 144
AGQY++ + D GK +IAS P G E ++ + G T + + G ++G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIASAPH---EEGPIELHIRHMPGGTFTDFVFGAREGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI++++E K + LY
Sbjct: 190 ERDILRFEGPLGSFFLREDSDKP-----IILLASGTGFAPIKAIVEHAAYQKIERPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R + ++ ++W ++ K VPV+S P+ W+G TG+V A
Sbjct: 245 WGGRRPADLYMRELCEQWAATLPNFKFVPVISDGLPEDAWTGRTGFVHLA 294
>gi|319793593|ref|YP_004155233.1| oxidoreductase faD-binding domain-containing protein [Variovorax
paradoxus EPS]
gi|315596056|gb|ADU37122.1| Oxidoreductase FAD-binding domain protein [Variovorax paradoxus
EPS]
Length = 338
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 92 GQYLQLRVV-DVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
GQY QL++ D+ +P +A S EF V+ V G TA + L+ GD V
Sbjct: 138 GQYAQLQLAPDLARPYSMA------GLSRDAELEFHVRKVPGGRVTAHIFEQLRVGDSVR 191
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+S +G + + + P +L A G+G++PI S++ +S + LY G R+
Sbjct: 192 VSGPLGTAYLRTKHRGP-----MLCAAGGTGLAPILSIVRGAIASGLMQPIHLYLGVRSD 246
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLC 266
+ D+ +E ++ G+K+ V+ G + A RA + G LC
Sbjct: 247 ADVYGLDELRELQAQHPGLKVHVVVVTGLAREGQRLGLITDAI-RADWPGSLDGWRAYLC 305
Query: 267 GQKQMAEEVTSIVLAEGVSSEK 288
G M E VT +V A G++ E+
Sbjct: 306 GSPPMVEAVTQLVRARGLAPEQ 327
>gi|334338815|ref|YP_004543795.1| dihydroorotate dehydrogenase electron transfer subunit
[Desulfotomaculum ruminis DSM 2154]
gi|334338822|ref|YP_004543802.1| dihydroorotate dehydrogenase electron transfer subunit
[Desulfotomaculum ruminis DSM 2154]
gi|334090169|gb|AEG58509.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein
[Desulfotomaculum ruminis DSM 2154]
gi|334090176|gb|AEG58516.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein
[Desulfotomaculum ruminis DSM 2154]
Length = 277
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 110/243 (45%), Gaps = 21/243 (8%)
Query: 56 WTPTPLA---EISPAAESLFHV-SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
+ P P+ + + L H +++ ++ D + + GQ+ ++ V G+ F IA
Sbjct: 5 YLPLPMKLAKNFTETTDKLIHTFTLEFANEQDAENFQYQPGQFAEVMVYGKGEAPF-GIA 63
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P+ G +F V V G + L L++G VV + +G + +++++ ++
Sbjct: 64 SSPT---EKGILKFSVAKV-GVVSTALHMLEEGAVVGVRGPLGNSYPLEQLKGK----SL 115
Query: 172 LIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWES-SGVKI 227
I G + +RS I+ + R D + + YGARN + Y+D+ EW++ S + +
Sbjct: 116 TIIGGGFAFTTLRSTIQYILNPANRGDYGDLTVIYGARNPGLLLYKDELAEWDARSDINL 175
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+ + + W G G++ K P+ ++CG M + ++ G + E
Sbjct: 176 ITTIDREAEGWGGRVGFIPT----VTKEVAPKTDYAIICGPPVMIKFTMPVLEECGFTPE 231
Query: 288 KIL 290
+I+
Sbjct: 232 RII 234
>gi|282600403|ref|ZP_05974168.2| NAD(P)H-flavin reductase [Providencia rustigianii DSM 4541]
gi|282565228|gb|EFB70763.1| NAD(P)H-flavin reductase [Providencia rustigianii DSM 4541]
Length = 240
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS---GAFEFLVKSVAGSTAEVLCGLKKG 144
H +AGQYL + + + K F ++P + S GA EF + ++A VL + +
Sbjct: 37 HFKAGQYLMVVMDERDKRPFSMASTPENKQSIELHIGASEFNLYAMA-----VLDRILEQ 91
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
++I G+ + + Q P +++ A G+G S S++ + + D+ Y+G
Sbjct: 92 QRIDIDIPHGKAWFRENSQNP-----IILIAGGTGFSYTHSILLAALAENPHRDITFYWG 146
Query: 205 ARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYV 245
R L+ + + + S +K++PV+ QPD NW G TG V
Sbjct: 147 GRQLEHLYDLGELQALSERYSNLKVIPVVEQPDENWRGRTGTV 189
>gi|296101426|ref|YP_003611572.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, F subunit
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055885|gb|ADF60623.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, F subunit
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHI--- 291
Query: 191 FSSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGET 242
F +R + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G T
Sbjct: 292 FDQLKRLGSQRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHT 351
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + K+ P+ +CG M V ++ GV E IL
Sbjct: 352 GFIHNVLYENYLKQHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIL 401
>gi|237668072|ref|ZP_04528056.1| sulfite reductase, subunit B [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237656420|gb|EEP53976.1| sulfite reductase, subunit B [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 264
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
D + + P IS E+ + +S DI H GQ+LQL + G+
Sbjct: 2 DNNILSTKPCEIISIKKENAHEYTFKVS--TDIIPEH---GQFLQLSIPKFGE------- 49
Query: 112 SPPSFAS-ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S + +G +F ++SV G + L+ GD + + G+G+ ++ + +
Sbjct: 50 APISVSGFGNGYMDFTIRSV-GKVTNAIFRLQPGDNIYLRGPYGKGWPFEKFKDKN---- 104
Query: 171 VLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
++I A G+G++P+RS+I ++K + + L +G R+ + ++D+FK+W++ +
Sbjct: 105 LVIVAGGTGVAPVRSMINEVCNNKGYLTSLNLLFGFRDANAILFRDEFKKWKN---EFNT 161
Query: 230 VLSQPDGNWSG-ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+ + + N G E G V ++ K +++ G M L GV +K
Sbjct: 162 IYTLDNENIDGFEQGLVTKHINKVLKKEFENNYEIIVVGPPMMMHFTCLEFLKLGVPDKK 221
Query: 289 ILKNF 293
I +F
Sbjct: 222 IWTSF 226
>gi|375098189|ref|ZP_09744454.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora marina XMU15]
gi|374658922|gb|EHR53755.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora marina XMU15]
Length = 391
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCG-LKKGDVV 147
RAGQY+ + V +P SP + G+ EF V++V G + L G + GDV
Sbjct: 190 RAGQYVSVEVPQ--RPRLWRYLSPANAPRPDGSLEFHVRAVDGGWVSRSLVGHTQSGDVW 247
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I +GR +VDR D VL+ A G+G++P+R++++ + V L+YG R
Sbjct: 248 RIGAPLGR-LSVDRESGRD----VLMVAGGTGLAPLRAILDDLAQWGQNPTVTLFYGGRT 302
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
L+ + ++ ++ +++ PV+ + G E G + A +R + V++
Sbjct: 303 LEDLYDLEQLWTLAATNPWLRVCPVVEEVTGEPGVEHGTLADAVTRWGAWHD---HDVLV 359
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G M S + A G I
Sbjct: 360 AGSPDMIRATVSRMFAAGTPLHAI 383
>gi|300703319|ref|YP_003744921.1| ferredoxin--nad(+) reductase [Ralstonia solanacearum CFBP2957]
gi|299070982|emb|CBJ42291.1| putative Ferredoxin--NAD(+) reductase [Ralstonia solanacearum
CFBP2957]
Length = 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S QP+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDAQPEDAWTGRTGFVHQA 294
>gi|111020861|ref|YP_703833.1| phenol hydrolase [Rhodococcus jostii RHA1]
gi|110820391|gb|ABG95675.1| probable phenol hydrolase [Rhodococcus jostii RHA1]
Length = 342
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS EF V++ AG A + L GD +
Sbjct: 134 AGQYAELIVPGSGVARQYSMANPPS---EQRLLEFHVRNTAGGLATEGWIFDSLAVGDRI 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ V+ P E P +LI G+G++P++S++ + LY+G R
Sbjct: 191 DMRGPLGQFGVVE----PREEPAILI-GGGTGLAPLKSIVRHALDHDLLPAIHLYHGGRR 245
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ E++ + PVLS+ NW G TG V A + +G L
Sbjct: 246 EADLYDVECFRAMEATDSRFHYHPVLSEE--NWDGATGMVTDAV--LGDFASCRGHSAYL 301
Query: 266 CGQKQM 271
CG M
Sbjct: 302 CGPPAM 307
>gi|393757545|ref|ZP_10346369.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393165237|gb|EJC65286.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVL----CGLKKGD 145
GQYL+ + D + ++ ++A+PP E ++ + G T V +K+ +
Sbjct: 135 GQYLEFILKDGSRRSY-SMATPPR---EDNQVELHIRHMPGGVFTDHVFGAGATAMKERE 190
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ + +G F + D ++ A+G+G +PI++LIE + + +V LY+G
Sbjct: 191 ILRVEAPLGSFFLRE-----DSAAPMVFLASGTGFAPIKALIERLIQTGSQREVALYWGG 245
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
R K + + ++W S ++ +PV+S QP+ W+G TG+V A
Sbjct: 246 RRPKDLYQSELAEKWASELPNLRFIPVISDAQPEDGWTGRTGFVHQA 292
>gi|449331921|gb|AGE97285.1| phenol/benzene hydroxylase subunit [Pseudomonas putida]
Length = 353
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 27/230 (11%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
T L E+SP + H+ +D A +AGQY+ L++ + ++A+PP A
Sbjct: 110 TRLVELSPTIRGV-HLKLDRPMA-------FQAGQYVNLQLPGIEGTRAFSLANPPQQAD 161
Query: 119 ASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
E V+ V G +T + LK GD +E+S G+ F V QP D ++ A
Sbjct: 162 E---VELHVRLVEGGVATGHIHRQLKVGDALELSGPYGQ-FFVRSSQPGD----LIFIAG 213
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQ- 233
GSG+S +S+I + + + L+ GAR + ++ F+ + + VP LSQ
Sbjct: 214 GSGLSSPQSMILDLLARGDTRCITLFQGARTRVELYNRELFEALAALHANFNYVPALSQA 273
Query: 234 -PDGNWSGETGYVQAAFSRAKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
D W G GYV A A++ F + G LCG M + + ++
Sbjct: 274 ADDAQWQGVRGYVHDA---ARQYFEGRFNGHKAYLCGPPPMIDAAITCLM 320
>gi|30250317|ref|NP_842387.1| Na(+)-translocating NADH-quinone reductase subunit F [Nitrosomonas
europaea ATCC 19718]
gi|30181112|emb|CAD86304.1| nqrF; Na(+)-translocating NADH-ubiquinone reductase subunit F
[Nitrosomonas europaea ATCC 19718]
Length = 406
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK D V ++ G FA D ++ G+G++P+RS I
Sbjct: 241 GQASSYIFSLKPDDSVTVTGPFGDFFARDTEN------EMIFIGGGAGMAPLRSHILDQL 294
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV- 245
K R + +YGAR+ M Y + F KE+++ + + P+ NW G TG++
Sbjct: 295 CRLKSRRKISFWYGARSRNEMFYVEDFDRLSKEYDNFKWYVALSDALPEDNWQGYTGFIH 354
Query: 246 QAAFSRAKKIF-NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
Q F K P+ LCG M++ V +++ GV E IL
Sbjct: 355 QILFDNYLKDHPAPEDCEYYLCGPPMMSKAVIDMLIGLGVEQENIL 400
>gi|440229631|ref|YP_007343424.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Serratia marcescens FGI94]
gi|440051336|gb|AGB81239.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Serratia marcescens FGI94]
Length = 407
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E +IF G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMIFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
+ + +YGAR+L+ M Y+D F + ++ QP+ NW+G TG++
Sbjct: 295 LKRLHSKRKITFWYGARSLREMFYEDDFNHLQEENENFTWHVALSDPQPEDNWTGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 355 HNVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|349610951|ref|ZP_08890270.1| hypothetical protein HMPREF1028_02245 [Neisseria sp. GT4A_CT1]
gi|348615302|gb|EGY64826.1| hypothetical protein HMPREF1028_02245 [Neisseria sp. GT4A_CT1]
Length = 177
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIV 228
+++ ATG+G +PIRS++ V Y+GAR+ + ++ +E +
Sbjct: 49 IILLATGTGYAPIRSILLDLIRQDSSRAVHFYWGARHQDDLYALEEAQELTGRLKNARFT 108
Query: 229 PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
PVLS+ D W GE GYVQ S AK + G V CG M E S++ A+
Sbjct: 109 PVLSKADEGWQGEKGYVQT--SAAKDYPDLSGYEVYACGSVAMTESAKSVLTAQ 160
>gi|153011369|ref|YP_001372583.1| oxidoreductase FAD/NAD(P)-binding subunit [Ochrobactrum anthropi
ATCC 49188]
gi|151563257|gb|ABS16754.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ochrobactrum
anthropi ATCC 49188]
Length = 342
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASAS----GAFEFLVKSVAGS-TAEVLCG-LKKG 144
AGQY Q+R G P S++ A+ G+ EF V+ VAG T+E + G LK G
Sbjct: 135 AGQYAQIRFT--GTPV-------RSYSMANRVGEGSLEFHVRRVAGGITSEHIHGALKSG 185
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
D VE+ +G + P +L A GSG++PI+S++E+ + + + +Y+G
Sbjct: 186 DKVELEFPLGSSYLRQNHSGP-----MLCIAGGSGLAPIKSIVETALAHGMKQPIHVYFG 240
Query: 205 ARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
AR+ + + F+ + + + V VLS+ + G+V A A + + G
Sbjct: 241 ARSECDLYLVEHFQSLAEQYANLTFVVVLSEAEATQY-RCGFVTKAV--ADDLMDLDGWK 297
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ G M + + LA G+ E +
Sbjct: 298 AYVAGPPGMVDAAIQLALARGLRGEDM 324
>gi|377807444|ref|YP_004978636.1| phenol 2-monooxygenase [Burkholderia sp. YI23]
gi|357938641|gb|AET92198.1| phenol 2-monooxygenase [Burkholderia sp. YI23]
Length = 354
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY+ + + P ++A P+ + E V+ V G T + ++ GD +
Sbjct: 134 QAGQYVNVHIPGEDMPRAFSLADQPA---SRNVIELNVRRVPGGKGTGYLHDEIRSGDEI 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
S GR F ++ D P +LI A GSG+S ++++ + + L YGARN
Sbjct: 191 RFSGPYGRFF----VRKSDPQPVILI-AGGSGLSSPKAMLIDMLEENDARQITLVYGARN 245
Query: 208 LKRMAYQDKFK--EWESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNP--QGT 261
+ Y F+ + E + VP LS D +W G G+V A AK F+ +G
Sbjct: 246 HSELYYDGLFQRLQREHANFTYVPALSDEPADSSWEGFRGFVHDA---AKAHFDGVFRGH 302
Query: 262 GVVLCGQKQMAE 273
LCG M E
Sbjct: 303 KAYLCGPPVMIE 314
>gi|410617375|ref|ZP_11328345.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola polaris LMG 21857]
gi|410163070|dbj|GAC32483.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola polaris LMG 21857]
Length = 408
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA E V I G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKEGDKATISGPFGEFFA-----KKTEAEMVFI-GGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G TG++
Sbjct: 296 LRRLKTDRKISFWYGARSLREMFYVEDFDMLQSENENFKWHVALSDPQPEDNWEGMTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V S++ GV E I+
Sbjct: 356 HQVLLQNYLKEHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 402
>gi|162459168|ref|NP_001105568.1| ferredoxin [Zea mays]
gi|6561889|dbj|BAA88236.1| ferredoxin [Zea mays]
gi|195619544|gb|ACG31602.1| ferredoxin--NADP reductase, leaf isozyme [Zea mays]
gi|219886469|gb|ACL53609.1| unknown [Zea mays]
gi|413953548|gb|AFW86197.1| ferredoxinFerredoxin--NADP reductase, leaf isozyme [Zea mays]
Length = 355
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC L+ GD V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 169 VKGVCSNFLCDLQPGDNVQITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 224
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
F K D + L+ G + Y+++F KE ++ +S+ N +G
Sbjct: 225 MFFEK-HDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKERAPENFRVDYAVSREQTNAAG 283
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
E Y+Q + K ++ T V +CG K M + + I+++
Sbjct: 284 ERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIMVS 328
>gi|254473891|ref|ZP_05087285.1| NADH:ubiquinone oxidoreductase, F subunit [Pseudovibrio sp. JE062]
gi|211957001|gb|EEA92207.1| NADH:ubiquinone oxidoreductase, F subunit [Pseudovibrio sp. JE062]
Length = 407
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA + + ++ G+G++P+RS I
Sbjct: 240 AGKMSSFIFNLKPGDKVTISGPFGEFFARETDK------EMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
E D + +YGAR+ K M + + F +E+ + + QPD +W G TG+
Sbjct: 294 LKRLENRDRKITFWYGARSKKEMFFVEDFDQLAQEFPNFTWHVALSDPQPDDDWDGYTGF 353
Query: 245 VQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++L GV E I+
Sbjct: 354 IHNVLYNEYLKDHAAPEDCEYYMCGPPIMNQSVINMLLDLGVEREDIM 401
>gi|407790823|ref|ZP_11137914.1| Na(+)-translocating NADH-quinone reductase subunit F [Gallaecimonas
xiamenensis 3-C-1]
gi|407202370|gb|EKE72362.1| Na(+)-translocating NADH-quinone reductase subunit F [Gallaecimonas
xiamenensis 3-C-1]
Length = 407
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 241 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + E+ K LS QP+ NW G TG++
Sbjct: 295 LRRLKSKRKITFWYGARSKREMFYVEDFDMLQAENENFKWHVALSDPQPEDNWDGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 355 HNVVYENHLKNHDAPEDCEYYMCGPPIMNASVIKMLKDLGVEDENIL 401
>gi|254281537|ref|ZP_04956505.1| oxidoreductase FAD/NAD(P)-binding [gamma proteobacterium NOR51-B]
gi|219677740|gb|EED34089.1| oxidoreductase FAD/NAD(P)-binding [gamma proteobacterium NOR51-B]
Length = 271
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
LV +V GS + LK GD++ + G + V + D VLI A G G++P
Sbjct: 63 LLVHTVRATGSVTQAFASLKAGDMIGVRGPFGSSWPVAAAEGGD----VLIVAGGLGLAP 118
Query: 183 IRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSG 240
+RS I + + R + + YGAR+ + + ++ K W + G+ + D NW G
Sbjct: 119 LRSAIYRLLAREGRYRRIVILYGARSPDTILFAEELKRWRDQPGISCDITVDYADANWQG 178
Query: 241 ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
G + ++A+ F+PQ ++CG + M + + + GVS I
Sbjct: 179 RVGVITQLIAQAE--FDPQQVVALICGPEIMMRFSVAALKSLGVSDASI 225
>gi|149177065|ref|ZP_01855673.1| Na(+)-translocating NADH-quinone reductase subunit F [Planctomyces
maris DSM 8797]
gi|148844130|gb|EDL58485.1| Na(+)-translocating NADH-quinone reductase subunit F [Planctomyces
maris DSM 8797]
Length = 397
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F D ++ G+G++P+RS I F
Sbjct: 233 GKMSSYIFNLKPGDEVTISGPYGEFFIADTDA------EMIYIGGGAGMAPLRSHIYELF 286
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQ--PDGNWSGETGYVQ 246
K V +YGAR+++ M Y+D+F+ E E K+ LS P+ NW+G G++
Sbjct: 287 KERKTNRKVSYWYGARSMREMFYEDEFRAIEKEFPNFKMHIALSDPMPEDNWTGLEGFIH 346
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
K P+ +CG M V +++ GV E I
Sbjct: 347 QVLLNEYLSKHPAPEDCEYYICGPPMMLSAVRNMLDDLGVEPENI 391
>gi|78062073|ref|YP_371981.1| oxidoreductase [Burkholderia sp. 383]
gi|77969958|gb|ABB11337.1| xylene monooxygenase electron transfer component [Burkholderia sp.
383]
Length = 343
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 43/219 (19%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPP------SFASA---SGAFEFLVKSVAGSTAEVLCG 140
+AGQY QL +IAS P SFA++ + FLV+ V G G
Sbjct: 134 KAGQYAQL-----------SIASLPGEARHYSFATSVRPNAQVNFLVRKVPG-------G 175
Query: 141 LKKGDVVEISQVMGRGFAV-----DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ G V ++GR +V D P + P +LI A GSG++PI +++E G +++
Sbjct: 176 VFSGHV-HAHDLVGRTVSVEGPLGDFWMRPADAPLILI-AGGSGLAPILAMLEDGVAART 233
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQ--PDGNWSGETGYVQAAFS 250
V L +GAR + D + + P+LS D +W G G V A +
Sbjct: 234 TRAVTLLFGARAQHDLYALDTIHDLAARWPGRFDFQPILSDEPADSSWRGSRGMVTDAIA 293
Query: 251 RAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
P T LCG +M + T +++A G+S +I
Sbjct: 294 ADL----PAQTHAYLCGPPRMIDAATDVLVARGLSRSRI 328
>gi|225174995|ref|ZP_03728992.1| oxidoreductase FAD/NAD(P)-binding domain protein [Dethiobacter
alkaliphilus AHT 1]
gi|225169635|gb|EEG78432.1| oxidoreductase FAD/NAD(P)-binding domain protein [Dethiobacter
alkaliphilus AHT 1]
Length = 282
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+ L + VG+ A S S + F ++ V GS ++ LKKGD++ I
Sbjct: 43 GQFNMLSMFGVGE----APISISSDGCSPDTFTHTIRHV-GSLTKMFSRLKKGDLIGIRG 97
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNLKR 210
G G+ +D + D VLI A G G++P+R I ++ + V L YGA+N
Sbjct: 98 PYGTGWPMDEARGKD----VLIVAGGIGLAPLRPAIYEILRNRGDYGKVELLYGAKNPGE 153
Query: 211 MAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
M + F +W V + S +W+ TG V F P+ T V+ CG +
Sbjct: 154 MLFTRYFDDWSKDFTVHLTVDDSSEHADWAHGTGVVTKLFEMMDS--TPKDTVVMTCGPE 211
Query: 270 QMAEEVTS 277
M + V S
Sbjct: 212 IMMKYVAS 219
>gi|108800384|ref|YP_640581.1| oxidoreductase FAD/NAD(P)-binding protein [Mycobacterium sp. MCS]
gi|119869513|ref|YP_939465.1| oxidoreductase FAD/NAD(P)-binding subunit [Mycobacterium sp. KMS]
gi|126436007|ref|YP_001071698.1| oxidoreductase FAD/NAD(P)-binding subunit [Mycobacterium sp. JLS]
gi|108770803|gb|ABG09525.1| oxidoreductase FAD/NAD(P)-binding protein [Mycobacterium sp. MCS]
gi|119695602|gb|ABL92675.1| oxidoreductase FAD/NAD(P)-binding domain protein [Mycobacterium sp.
KMS]
gi|126235807|gb|ABN99207.1| oxidoreductase FAD/NAD(P)-binding domain protein [Mycobacterium sp.
JLS]
Length = 284
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
+ G++L L VG+ +AI+ + + A +++V G+ + L + G V+ +
Sbjct: 47 KPGEFLMLYAFGVGE---IAISVSGAPTATDDAITHTIRAV-GAVSRALHDAQPGTVIGM 102
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNL 208
G + +D + D ++I A G G++P+R ++ + ++R V L GAR+
Sbjct: 103 RGPFGTNWGLDDAEGRD----LVIVAGGVGLAPLRPVVLGALADRDRYGRVALIAGARSR 158
Query: 209 KRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + D+ + W SG + + + P W GE G+V R P T LCG
Sbjct: 159 EEFLFSDELRRWADSGAIDVHLTVDVPVQGWPGEVGFVTEPLRRLP--VRPGRTTAFLCG 216
Query: 268 QKQMAEEVTSIVLAEGVSSEKI 289
+ M +L +G++ +I
Sbjct: 217 PEPMMRNGAQELLRKGLAHSEI 238
>gi|56460334|ref|YP_155615.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Idiomarina loihiensis L2TR]
gi|56179344|gb|AAV82066.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina loihiensis L2TR]
Length = 548
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 91 AGQYLQLRVVDVGK--PTFLAIASPPSFASASGAFEFLVKSVA--------GSTAEVLCG 140
AGQ++Q R+ + + ++A+ P F F V+ + G + LC
Sbjct: 342 AGQFMQFRIPHLNEILSRHYSVATRPH----PTRFVFNVRQLPSPSEGVPPGIGSNYLCN 397
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L+ G V+ +G F ++ + + V I G+GI+P+R+LI+S ++
Sbjct: 398 LEPGAHVD---AIGP-FGDFQLTKQNNHTQVFI-GGGAGIAPLRALIQSELAADSPRRCI 452
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP 258
+YGAR K + Y+D+F+ E + +PVLS+ W+G TG+V + N
Sbjct: 453 FFYGARYEKELCYRDEFERDER--LNYIPVLSEVAKSDEWAGHTGFVHETAMKWLAGKNK 510
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + +CG M E + G+ E+I
Sbjct: 511 ETLDIYVCGPPPMLEATLKSLADFGIPRERI 541
>gi|117928225|ref|YP_872776.1| oxidoreductase FAD/NAD(P)-binding subunit [Acidothermus
cellulolyticus 11B]
gi|117648688|gb|ABK52790.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidothermus
cellulolyticus 11B]
Length = 249
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+L + ++ +G+ + S G V++V G+ + +C G V+ +
Sbjct: 18 GQFLMVYLLGIGE-----VPISVSGIDDDGTLSITVRAV-GAVSRAICASTPGSVLGLRG 71
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF-SSKERSDVRLYYGARNLKR 210
G + + ++ + VL+ A G G++P+R LI + + + + + YGAR
Sbjct: 72 PCGTAWPI--VEARGRH--VLVVAGGIGLAPLRPLIRAVLDAGGAHTGLTVLYGARTPAD 127
Query: 211 MAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQ 270
+ Y+D+ W + ++ + + D +W G+ G V + A +P T V +CG +
Sbjct: 128 LLYRDELTRWAEA-ARVAVTVDRADSSWRGQVGVVPKLIATAD--VDPAATRVYMCGPEI 184
Query: 271 MAEEVTSIVLAEGVSSEKI 289
M ++A G+SS+ I
Sbjct: 185 MMRLSAEALIARGLSSDAI 203
>gi|424776126|ref|ZP_18203111.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Alcaligenes sp. HPC1271]
gi|422888586|gb|EKU30972.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Alcaligenes sp. HPC1271]
Length = 344
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVL----CGLKKGD 145
GQYL+ + D + ++ ++A+PP E ++ + G T V +K+ +
Sbjct: 135 GQYLEFILKDGSRRSY-SMATPPR---EDNQVELHIRHMPGGVFTDHVFGAGATAMKERE 190
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ + +G F + D ++ A+G+G +PI++LIE + + +V LY+G
Sbjct: 191 ILRVEAPLGSFFLRE-----DSAAPMVFLASGTGFAPIKALIERLIQTGSQREVALYWGG 245
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
R K + + ++W S ++ +PV+S QP+ W+G TG+V A
Sbjct: 246 RRPKDLYQSELAEKWASELPNLRFIPVISDAQPEDGWTGRTGFVHQA 292
>gi|410621870|ref|ZP_11332712.1| ferredoxin--NADP+ reductase [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410158580|dbj|GAC28086.1| ferredoxin--NADP+ reductase [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 249
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
GS + L L+KGD ++I GF V P E +L+ ATG+G+ P S++E+
Sbjct: 75 GSLSPKLHALQKGDKLKIMSP-ATGFLVLNEVPASE--NLLMLATGTGVGPFLSILETRE 131
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVK---IVPVLSQPD--GNWSG------ 240
+ ++ L YG R +AY K ++W++ + VPV+S+ G G
Sbjct: 132 PWRTYKNITLVYGVRKFHDLAYLAKIEKWQNDHAEQFSFVPVVSREKHAGTIQGRIPALI 191
Query: 241 ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
++G +Q ++ K NP+ T V+LCG M + ++
Sbjct: 192 KSGVIQ---NQTKIDINPENTQVMLCGNPAMIADAMQVL 227
>gi|410611040|ref|ZP_11322141.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola psychrophila 170]
gi|410169392|dbj|GAC36030.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola psychrophila 170]
Length = 410
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G +A D ++ G+G++P+RS I
Sbjct: 244 AGKMSSYIWSLKEGDKATISGPFGEFYA------KDSSAEMVFVGGGAGMAPMRSHIFDQ 297
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
+ + +YGAR+L+ M Y + F KE E+ + QP+ NW G+TG++
Sbjct: 298 LRRIRSTRPITFWYGARSLREMFYVEDFDMLQKENENFKWHVALSDPQPEDNWKGDTGFI 357
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E I+
Sbjct: 358 HNVLLENYLKNHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|86750747|ref|YP_487243.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit
[Rhodopseudomonas palustris HaA2]
gi|86573775|gb|ABD08332.1| Phenylacetate-CoA oxygenase/reductase, PaaK subunit
[Rhodopseudomonas palustris HaA2]
Length = 365
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 74 VSIDISDAPDIASSHT-RAGQYLQLRVVDVGKPTF--LAIASPPSFASASGAFEFLVKSV 130
+S+ + PD+A ++ AGQYL LR G+ +I S P G VK +
Sbjct: 29 ISLSFTVPPDLADAYQFAAGQYLTLRTTMDGEEVRRSYSICSGPD----DGELRIAVKKI 84
Query: 131 AGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G V LK GD +++ GR F V PDE T + FA GSGI+PI SLI+
Sbjct: 85 DGGAFSVWATEELKAGDTLDVMTPTGR-FGV--APAPDEVRTYVGFAAGSGITPILSLIK 141
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVK---IVPVLSQPDGNWSGETGYV 245
+ + + S L+YG R+ ++ ++D + + ++ + VLSQ + + +
Sbjct: 142 AVLAREPASRFFLFYGNRSTDQILFRDTLETLKDRYLQRFAVFHVLSQEEQD----VPVM 197
Query: 246 QAAFSRAK-----KIFNPQGT--GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
Q R K P + V +CG M+++V + G++ +I
Sbjct: 198 QGRLDRDKVRLLLTAMLPAASVDHVFVCGPIGMSDDVEAACRELGIAEARI 248
>gi|289207418|ref|YP_003459484.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288943049|gb|ADC70748.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thioalkalivibrio
sp. K90mix]
Length = 246
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 26/245 (10%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + E + LF + ++ P +AGQ+ +LR+ G+P +A P S
Sbjct: 3 WVTGTVQERKQWTDRLFSLRVEADVEP------FKAGQFNRLRLEIDGEP----VARPYS 52
Query: 116 FASASGA--FEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A +F + +V G + L L+ GD VE+ F +D + PD +
Sbjct: 53 YVNAPDETPLDFYLITVPEGPLSNRLVQLEPGDTVELMPRATGFFTLDEL--PDSR-DLW 109
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDK---FKEWESSGVKIVP 229
+ +TG+ + P S++++ + ++RL + R + YQD F+E + + +P
Sbjct: 110 LLSTGTALGPFLSMLKTDTPWQRFENIRLIHAVRKADELTYQDTIRQFQERDPKQFQYIP 169
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFN------PQGTGVVLCGQKQMAEEVTSIVLAEG 283
+S+ G G V AA + + + P+ + V+LCG M ++ ++I+ G
Sbjct: 170 FVSREPCP-GGLEGRVPAAIAEGRLEHHAGLKIAPEHSQVMLCGNPAMVKDTSAILRERG 228
Query: 284 VSSEK 288
+ +
Sbjct: 229 LEKNR 233
>gi|160887229|ref|ZP_02068232.1| hypothetical protein BACOVA_05246 [Bacteroides ovatus ATCC 8483]
gi|383114631|ref|ZP_09935393.1| hypothetical protein BSGG_1195 [Bacteroides sp. D2]
gi|156107640|gb|EDO09385.1| oxidoreductase NAD-binding domain protein [Bacteroides ovatus ATCC
8483]
gi|313693660|gb|EFS30495.1| hypothetical protein BSGG_1195 [Bacteroides sp. D2]
Length = 280
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +I+ A + + D + + H +AGQ+ + G+ TF +SP +
Sbjct: 15 IEKITHEAPGVKTFRLRFKDEKEGEAFHFKAGQFGEYSAFGEGESTFCIASSP----TRK 70
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
G E + AG L L++G V G F +D + + +L A G +
Sbjct: 71 GYIECTFRQ-AGRVTTGLAKLEEGATVGFRGPFGNTFPLDEWKGKN----LLFVAGGIAL 125
Query: 181 SPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDG--- 236
P+R +I + +E D+ + YGA+++ + Y+++ KEWE+ + P G
Sbjct: 126 PPMRCVIWNALDRREDFKDITIVYGAKSVNDLVYKEELKEWENRPDVNLITTVDPGGETP 185
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+W+G+ G+V + A T ++CG M + ++ G + E I
Sbjct: 186 DWTGKVGFVPSVLEAAAPA--SADTVAIVCGPPVMIKFTFPVLEKLGFADENI 236
>gi|152981474|ref|YP_001352374.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp.
Marseille]
gi|151281551|gb|ABR89961.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Janthinobacterium sp.
Marseille]
Length = 342
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D GK ++ + P + ++ + G T V LK+ D++
Sbjct: 133 RAGQYIEFLLKD-GKRRSYSLGNAPH---SDEHLTLHIRHMPGGLFTDHVFTTLKERDIL 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F + + P +++ A+G+G +PI++++E K + + LY+G R
Sbjct: 189 RFEGPQGSFFLREDSKKP-----MVLLASGTGFAPIKAIVEQALHDKSQRPMTLYWGGRR 243
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
K + ++W E VPV+S D W G +G+V A + + N V
Sbjct: 244 PKDLYMHALCEQWAREIPHFNYVPVISHATADDQWQGRSGFVHKAV--MEDLPNMSAYQV 301
Query: 264 VLCGQKQMAE 273
CG M E
Sbjct: 302 YACGTPVMVE 311
>gi|419797897|ref|ZP_14323348.1| putative CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase
reductase [Neisseria sicca VK64]
gi|385696823|gb|EIG27288.1| putative CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase
reductase [Neisseria sicca VK64]
Length = 335
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKS-VAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G E ++ G +E++ G +K+
Sbjct: 131 AGQYIDLLLPGNVSRSY-SIANSPD---QEGILELHIRRRENGVCSEMIFGSEPKVKEKG 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V I +G F + D +++ ATG+G +PIRS++ V Y+GA
Sbjct: 187 IVRIKGPLG-SFTLQE----DSGKPIILLATGTGYAPIRSILLDLIRQDSSRAVHFYWGA 241
Query: 206 RNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R+ + ++ +E + PVLS+ +W GE GYVQ A AK + G V
Sbjct: 242 RHQDDLYSLEEAQELTGRLKNARFTPVLSKAAEDWQGEKGYVQTA--AAKDYPDLSGYEV 299
Query: 264 VLCGQKQMAEEVTSIVLAE 282
CG M E S++ A+
Sbjct: 300 YACGSVAMTESAKSVLTAQ 318
>gi|309781512|ref|ZP_07676248.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Ralstonia sp. 5_7_47FAA]
gi|404396827|ref|ZP_10988621.1| hypothetical protein HMPREF0989_01087 [Ralstonia sp. 5_2_56FAA]
gi|308919925|gb|EFP65586.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Ralstonia sp. 5_7_47FAA]
gi|348616908|gb|EGY66400.1| hypothetical protein HMPREF0989_01087 [Ralstonia sp. 5_2_56FAA]
Length = 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIANPPH---DDGPIELHIRHMPGGAFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFIGSTRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R + + K +EW + VPV+S P+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAKAEEWARTLPNFTYVPVVSNALPEDAWTGRTGFVHQA 294
>gi|315426445|dbj|BAJ48083.1| oxidoreductase FAD/NAD(P)-binding subunit [Candidatus Caldiarchaeum
subterraneum]
gi|315426457|dbj|BAJ48090.1| oxidoreductase FAD/NAD(P)-binding subunit [Candidatus Caldiarchaeum
subterraneum]
gi|343485219|dbj|BAJ50873.1| oxidoreductase FAD/NAD(P)-binding subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 284
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASG---AFEFLVKSVAGSTAEVL 138
P S + GQ+ L VG+ +P SF+ S E +++V G T L
Sbjct: 40 PLNGSVNYSPGQFSMLYRYGVGE-------APISFSGDSDNGEQVEHTLRAVGGVT-RAL 91
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
+ GD V + G G+ + + D V++ A G G++P+R LI S+E+
Sbjct: 92 ASAQPGDTVGMRGPFGNGWPLKEAEGHD----VVVVAGGIGLAPLRPLIRHFLRSREKIG 147
Query: 198 DVRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIF 256
+ + YGAR+ + Y+ + + W+ G +++ + + D W G G V F
Sbjct: 148 KLYILYGARSPGELVYKRELQAWKKRLGARLLITVDKGDEKWRGHIGVVTTLFKYV--TL 205
Query: 257 NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+P+ T +CG + M + + +G+ ++I
Sbjct: 206 DPENTYAYICGPEIMMRFTIAELKKQGLGDDRIF 239
>gi|241663898|ref|YP_002982258.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia pickettii 12D]
gi|240865925|gb|ACS63586.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ralstonia
pickettii 12D]
Length = 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIANPPH---DDGPIELHIRHMPGGAFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFIGSTRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R + + K +EW + VPV+S P+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAKAEEWARTLPNFTYVPVVSNALPEDAWTGRTGFVHQA 294
>gi|354605287|ref|ZP_09023276.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Alistipes indistinctus YIT 12060]
gi|353347866|gb|EHB92142.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Alistipes indistinctus YIT 12060]
Length = 414
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 17/192 (8%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IA+PP + +G+F +K G + + LK GD V IS G F D P+E
Sbjct: 229 IRIATPP-WDRTAGSF---MKVNPGICSSYIFSLKPGDKVTISGPYGEFFVKDT---PNE 281
Query: 168 YPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESS--G 224
+ G+G++P+RS I F + K + V +YGAR+ + + Y+ F+E E
Sbjct: 282 K---MFIGGGAGMAPMRSHIFHLFKTQKVTAPVTYWYGARSKREIFYESDFEEIEKQFPN 338
Query: 225 VKIVPVLSQP--DGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
LS P + NWSG G++ + K P+ LCG M V ++
Sbjct: 339 FHFHIALSDPKEEDNWSGYVGFIHKVVFENYLKNHEAPEDIEYYLCGPPMMNAAVNQMLD 398
Query: 281 AEGVSSEKILKN 292
GV E I+ +
Sbjct: 399 ELGVPGENIMYD 410
>gi|207742590|ref|YP_002258982.1| reductase protein [Ralstonia solanacearum IPO1609]
gi|206593984|emb|CAQ60911.1| reductase protein [Ralstonia solanacearum IPO1609]
Length = 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G+K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGVKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S +P+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDARPEDAWTGRTGFVHQA 294
>gi|421787769|ref|ZP_16224102.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
Naval-82]
gi|410406110|gb|EKP58134.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
Naval-82]
Length = 353
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ D+ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPDIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPEPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|421895424|ref|ZP_16325826.1| reductase protein [Ralstonia solanacearum MolK2]
gi|206586589|emb|CAQ17176.1| reductase protein [Ralstonia solanacearum MolK2]
Length = 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G+K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGVKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S +P+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDARPEDAWTGRTGFVHQA 294
>gi|410626989|ref|ZP_11337735.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola mesophila KMM 241]
gi|410153368|dbj|GAC24504.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola mesophila KMM 241]
Length = 408
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA + D ++ G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKEGDKATISGPFGEFFA----KKTD--AEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G TG++
Sbjct: 296 LRRLKTDRKISFWYGARSLREMFYVEDFDMLQEENDNFKWHVALSDPQPEDNWEGMTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ GV E I+
Sbjct: 356 HQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 402
>gi|109896786|ref|YP_660041.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas atlantica T6c]
gi|123171768|sp|Q15YQ1.1|NQRF_PSEA6 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|109699067|gb|ABG38987.1| NADH:ubiquinone oxidoreductase, subunit F [Pseudoalteromonas
atlantica T6c]
Length = 408
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA + D ++ G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKEGDKATISGPFGEFFA----KKTD--AEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G TG++
Sbjct: 296 LRRLKTDRKISFWYGARSLREMFYVEDFDMLQKENDNFKWHVALSDPQPEDNWEGMTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ GV E I+
Sbjct: 356 HQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 402
>gi|119898119|ref|YP_933332.1| hypothetical protein azo1828 [Azoarcus sp. BH72]
gi|119670532|emb|CAL94445.1| hypothetical secreted protein [Azoarcus sp. BH72]
Length = 395
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L G VV++S G D + DE VLI A G GI+P+R+++ + + +
Sbjct: 155 LLPGAVVDVSPPRG-----DFVVADDELDLVLI-AGGIGITPMRAMLHASLARPRARRIV 208
Query: 201 LYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
L + AR+ + Y+ +F+ S +P++S+PDG W GE G + A A + P
Sbjct: 209 LLHAARHAGTLLYRGEFESLASLNPHFSYLPIVSRPDGFWRGERGRLDAHRVLA-AVPTP 267
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
Q LC + + E++ ++A G+ +I
Sbjct: 268 QQARFYLCAGQALMEDLGGGLIAAGIDPARI 298
>gi|398861689|ref|ZP_10617305.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Pseudomonas sp.
GM79]
gi|398231894|gb|EJN17874.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Pseudomonas sp.
GM79]
Length = 345
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 92 GQYLQLRVVDVGKPTF-LAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
GQY+ + + D + ++ LA A+ A + E ++ G + V +K +++
Sbjct: 130 GQYVDILLPDGARRSYSLATAAR---AEGNWELELHIRHSPGGLFSDHVFSNMKARELLT 186
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I +G F + P +++ A+G+G +PIRS+++ F + D+ LY+G R
Sbjct: 187 ICGPLGTFFLREDSSKP-----IILVASGTGYAPIRSMLQYAFEAMPNRDIHLYWGGRTR 241
Query: 209 KRMAYQDKFKEWESSGVK--IVPVLSQ--PDGNWSGETGYVQAA 248
+ D+ +W++ + +PVLS P W G TG+V A
Sbjct: 242 ADLYLADEPAQWDAQHERFHFIPVLSDPAPRDAWQGRTGFVHQA 285
>gi|83746671|ref|ZP_00943720.1| Oxidoreductase [Ralstonia solanacearum UW551]
gi|83726624|gb|EAP73753.1| Oxidoreductase [Ralstonia solanacearum UW551]
Length = 377
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G+K+G
Sbjct: 162 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGVKEGQPAMK 217
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 218 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 272
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S +P+ W+G TG+V A
Sbjct: 273 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDARPEDAWTGRTGFVHQA 322
>gi|225075629|ref|ZP_03718828.1| hypothetical protein NEIFLAOT_00645 [Neisseria flavescens
NRL30031/H210]
gi|224953051|gb|EEG34260.1| hypothetical protein NEIFLAOT_00645 [Neisseria flavescens
NRL30031/H210]
Length = 362
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-KSVAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G E + K G +E++ G +K+
Sbjct: 159 AGQYIDLLLPGNISRSY-SIANSPD---QEGVLELHIRKRENGVCSEMIFGADPKVKEKG 214
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V + +G F + + D +++ ATG+G +PIRS++ V Y+GA
Sbjct: 215 IVRVKGPLGT-FTLQK----DSDKPIILLATGTGYAPIRSILLDLIHQNSERPVHFYWGA 269
Query: 206 RNLKRMAYQDKFKEWES-----SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + + +E E+ K PVLS+PD +W GE GYVQ A+ +
Sbjct: 270 RQQEDLY---ALEEAETLIGRLKNAKFSPVLSKPDSDWKGENGYVQNV--AAQNYPDLSQ 324
Query: 261 TGVVLCGQKQMAEEVTSIV 279
V CG M E S++
Sbjct: 325 YEVYACGSLAMTESAQSLL 343
>gi|426404363|ref|YP_007023334.1| phenol 2-monooxygenase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861031|gb|AFY02067.1| phenol 2-monooxygenase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 240
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 25/240 (10%)
Query: 67 AAESLFHVSID--ISDAPDI----ASSHT------RAGQYLQLRV-VDVGKPTFLAIASP 113
AA +++H+ ++ I P + + T +AGQ++ L V KP A +
Sbjct: 3 AARTIYHMRVEEIIDHTPTVRELVLKTETPNEFGFKAGQFVMLHVPQGEAKPALRAYSIA 62
Query: 114 PSFASASGAFEFLVKSVAGSTAEVLCG-LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +G F L K V A LK G+++ + G+ F +PP E ++
Sbjct: 63 SDDRTKNG-FRLLFKFVENGLASTFVWQLKGGELLNFTGPFGKVFFQ---EPPTE--QIV 116
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPV 230
TG+G+S + S R+ +G R K M YQ + +E +++ K V
Sbjct: 117 FLNTGTGLSQHLCYLLSKKEQYPNLRYRMLFGVRTEKDMYYQKEIEELQNALPDFKFEFV 176
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL-AEGVSSEKI 289
LS+P +W G+ GYVQ S P T LCG M ++V +L +G KI
Sbjct: 177 LSRPQDDWKGKKGYVQNFISEFDYKNIP--TTFYLCGNGGMIKDVKHQLLEVDGFDKTKI 234
>gi|317486045|ref|ZP_07944899.1| oxidoreductase NAD-binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316922723|gb|EFV43955.1| oxidoreductase NAD-binding domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 278
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV- 130
F V D D + + + GQ QL V VG+ TF+ +SP ++L SV
Sbjct: 28 FRVRFD--DEEKMKNFTFQPGQVGQLSVFGVGESTFVINSSPTRM-------DYLQFSVM 78
Query: 131 -AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
AG L L GD + + +G F ++ + + V G G++PIR+++
Sbjct: 79 KAGENTAALHKLNAGDKIGVRAPLGNWFPYEQWKGKN----VFFIGGGIGMAPIRTIMVY 134
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQA 247
+ K+ D+ L YGA+ +++Q EW E + + + P W + G +
Sbjct: 135 LLDNRKDYGDISLLYGAKTPADLSFQSDMPEWLERKDLNVTLTIDNPADGWEHKVGLIPN 194
Query: 248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
P+ T VLCG M + + ++ G ++I
Sbjct: 195 VLKEIGP--KPKNTIAVLCGPPIMIKFTLAALVELGFPDDQI 234
>gi|212702903|ref|ZP_03311031.1| hypothetical protein DESPIG_00936 [Desulfovibrio piger ATCC 29098]
gi|212673765|gb|EEB34248.1| oxidoreductase, FAD-binding protein [Desulfovibrio piger ATCC
29098]
Length = 639
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 16/251 (6%)
Query: 47 AAVRQDTTVWTPTP--LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGK 104
A+ R D ++TP P + I + + D +A + GQ+ + V VG+
Sbjct: 361 ASTRIDPQLFTPYPARIVAIHDETPDIRRYVVRYMDE-RLAETFRLTGQFFMVTVFGVGE 419
Query: 105 PTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQP 164
S P G FEF VK V G L L GDV+ + G+GF
Sbjct: 420 VAL----SIPFGDQHDGQFEFCVKKV-GKVTSALAKLGVGDVIGLRGPYGKGFPYRSFAG 474
Query: 165 PDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWES- 222
D VL+ +G G++P+R++I +ER + + A + + Y+ K+W
Sbjct: 475 RD----VLVVGSGVGLAPVRTIIVRLLQERERYGRIAIIASATRYEGLVYKQDLKDWSKI 530
Query: 223 SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
GV + L++P GY+ F+ +LC + + V +L
Sbjct: 531 PGVTVQYALAKPTDAVQAHVGYINDLLPELD--FDWANARAILCASPRRIKLVARDLLGL 588
Query: 283 GVSSEKILKNF 293
G++ + I +
Sbjct: 589 GMNGKDIFTSL 599
>gi|120601879|ref|YP_966279.1| oxidoreductase FAD/NAD(P)-binding subunit [Desulfovibrio vulgaris
DP4]
gi|120562108|gb|ABM27852.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfovibrio
vulgaris DP4]
Length = 295
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 30/238 (12%)
Query: 65 SPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
+PA ++L + I D + + GQ QL + VG+ TF+ I SPP+ +
Sbjct: 39 TPAIKTL---RVRIDDTARMDAFRFNPGQVGQLSLFGVGESTFV-INSPPT------RMD 88
Query: 125 FLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+L S+ AG L GLK GD V + +G F + ++ D ++ G G++P
Sbjct: 89 YLQFSIMRAGEVTAALHGLKPGDKVGVRAPLGNWFPFEDMRGKD----IVFVGGGIGMAP 144
Query: 183 IRSLIESGFSSK-ERSDVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSG 240
+R+L+ ++ + ++ L YGAR MA++D ++W S + + Q +W
Sbjct: 145 LRTLLLYMLDNRADYGNITLLYGARTPGDMAFRDDVQDWLGRSDMNTTLTVDQAPDDWPH 204
Query: 241 ETGYV-----QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G + A S A + VLCG M + + + E+I+
Sbjct: 205 RAGLIPHVLLDLAPSNANSV-------AVLCGPPIMIKFTVEALKKLHFADEQIITTL 255
>gi|398809440|ref|ZP_10568290.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Variovorax sp.
CF313]
gi|398085915|gb|EJL76557.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Variovorax sp.
CF313]
Length = 329
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 92 GQYLQLRVV-DVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
GQY QL+ D+ +P +A S EF V+ V G TA + L+ GD V
Sbjct: 129 GQYAQLQFAPDLARPYSMA------GLSRDAELEFHVRRVPGGRVTAHIFEQLRVGDSVR 182
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+S +G + + + P +L A G+G++PI S++ ++ V LY G R+
Sbjct: 183 VSGPLGTAYLRTKHRGP-----MLCAAGGTGLAPILSIVRGAIATGLTQPVHLYLGVRSD 237
Query: 209 KRMAYQDKFKEWESS--GVKI-VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + +E ++ G+ + V V++ P N + G + A RA N G L
Sbjct: 238 ADVYGLGELRELQAQHPGLNVHVVVVTGPARN-NQRVGLITDAI-RADWPGNLDGWRAYL 295
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG M E VT +V G+++E+I
Sbjct: 296 CGSPPMVEAVTQLVRGRGLATEQI 319
>gi|254513110|ref|ZP_05125176.1| NADH:ubiquinone oxidoreductase, F subunit [Rhodobacteraceae
bacterium KLH11]
gi|221533109|gb|EEE36104.1| NADH:ubiquinone oxidoreductase, F subunit [Rhodobacteraceae
bacterium KLH11]
Length = 407
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA + E V I G+G++P+RS I
Sbjct: 240 AGQMSSYIFNLKPGDKVTISGPFGEFFARET-----EKEMVFI-GGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
E + + +YGAR+ K M + + F KE+++ + +QP+ +W G TG+
Sbjct: 294 LKRLENRNRKISFWYGARSKKEMFFVEDFDTLAKEFDNFEWHVALSDAQPEDDWKGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++L GV E I+
Sbjct: 354 IHNVLFEEYLKNHPAPEDCEYYMCGPPIMNQSVINMLLDLGVDREDIM 401
>gi|340788734|ref|YP_004754199.1| putative ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
[Collimonas fungivorans Ter331]
gi|340554001|gb|AEK63376.1| putative Ferredoxin:Oxidoreductase
FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
[Collimonas fungivorans Ter331]
Length = 341
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 29/219 (13%)
Query: 39 RRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLR 98
R +A + VR+ PT + ++ A+ + +S+ + P AGQY++
Sbjct: 90 REVAGIGEFPVRK-----MPTRVVKLDKVADDVIVLSLQL---PANERLQYLAGQYVEFM 141
Query: 99 VVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGDVVEISQVM 153
+ D + ++ S A+A E+L ++ + G T +V +K+ D++ + +
Sbjct: 142 LRDGKRRSY-------SMANAPYKDEYLTLHIRHMPGGLFTDQVFTTMKERDILRLEGPL 194
Query: 154 GRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAY 213
G F ++ + P VL+ A+G+G +PI++L+E + + + LY+G R + +
Sbjct: 195 GTFF----LREDSDKPMVLL-ASGTGFAPIKALVEQCAHTGSQRPITLYWGGRRPQDLYM 249
Query: 214 QDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+EW ++ VPV+S QP+ W G G+V A
Sbjct: 250 MALCEEWAATLPDFTFVPVISNAQPEDQWQGRNGFVHQA 288
>gi|167753594|ref|ZP_02425721.1| hypothetical protein ALIPUT_01871 [Alistipes putredinis DSM 17216]
gi|167658219|gb|EDS02349.1| NADH:ubiquinone oxidoreductase, F subunit [Alistipes putredinis DSM
17216]
Length = 420
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IA+PP F A+G F K G + + K GD V IS G F D + E
Sbjct: 229 IRIATPP-FDRATGTF---AKVNPGICSSYIFSRKPGDKVTISGPYGEFFLPDNLPATQE 284
Query: 168 YPTVLIFATGSGISPIRSLIESGFSSKERSD-VRLYYGARNLKRMAYQDKFKEW--ESSG 224
++ G+G++P+RS I F +++ S V +YGAR LK + Y D+F E E
Sbjct: 285 ---LVFIGGGAGMAPMRSHIMHLFKTEKTSRPVSFWYGARALKEVPYMDEFLEIQREFPN 341
Query: 225 VKIVPVLSQPD--GNWSG---ETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTS 277
K L +PD + +G G+V + K P+ ++CG M V
Sbjct: 342 FKFHLALDRPDPQADAAGVKYTPGFVHNVLYENYLKNHQAPEDNIYLMCGPPMMISSVVK 401
Query: 278 IVLAEGVSSEKIL-KNF 293
++ + GV SE IL NF
Sbjct: 402 MLDSLGVPSENILYDNF 418
>gi|411011382|ref|ZP_11387711.1| FMN reductase [Aeromonas aquariorum AAK1]
gi|423198989|ref|ZP_17185572.1| hypothetical protein HMPREF1171_03604 [Aeromonas hydrophila SSU]
gi|404629648|gb|EKB26391.1| hypothetical protein HMPREF1171_03604 [Aeromonas hydrophila SSU]
Length = 232
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ E+ ++++HV++ + + GQYL + + D K F +IA+ P+
Sbjct: 8 VEELREYVDTIWHVALT-----PLQEVSFKPGQYLLVVMSDSDKRPF-SIANSPT---RP 58
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G E + + +VL +++ +EI G+ F + P +++ A G+
Sbjct: 59 GVLELQIGATPENAYAGQVLARMREQGEIEIELAAGKAFLREESPRP-----LILMAGGT 113
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDG 236
G S R+++E S + V Y+G R + Q++ ++WE + +PV+ +P+
Sbjct: 114 GFSYARAILEYLIDSGSKRPVFFYWGVRQAHWLYEQEQMQQWERDYAPLTYIPVVQEPES 173
Query: 237 NWSGETGYVQAA 248
+W+G+TG V A
Sbjct: 174 DWAGKTGLVHKA 185
>gi|372266577|ref|ZP_09502625.1| Na(+)-translocating NADH-quinone reductase subunit F [Alteromonas
sp. S89]
Length = 407
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD + + G FA D ++ G+G++P+RS I F
Sbjct: 242 GQMSSYVFNLKPGDTMRVYGPFGEFFARDTDN------EMVFIGGGAGMAPMRSHI---F 292
Query: 192 SSKER----SDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETG 243
+R + +YGAR+L+ M Y+D + +E+++ I QP+ NW G TG
Sbjct: 293 DQLKRLHSTRKISFWYGARSLREMFYEDDYNGLQEEFDNFQWHIALSDPQPEDNWEGYTG 352
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + K P+ +CG M V +++ GV E IL
Sbjct: 353 FIHNVVYENYLKDHPAPEDCEYYMCGPPMMNAAVINMLKDLGVEDENIL 401
>gi|384100594|ref|ZP_10001652.1| phenol hydrolase [Rhodococcus imtechensis RKJ300]
gi|383841828|gb|EID81104.1| phenol hydrolase [Rhodococcus imtechensis RKJ300]
Length = 342
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS EF V++ AG A + L GD +
Sbjct: 134 AGQYAELIVPGSGVARQYSMANPPS---EQRLLEFHVRNTAGGLATEGWIFDSLAVGDRI 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ FAV + E P +LI G+G++P++S++ + LY+G R
Sbjct: 191 DLRGPLGQ-FAVVEAR---EEPAILI-GGGTGLAPLKSIVRHALDHDLLPAIHLYHGGRR 245
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ E++ + PVLS+ NW G TG V A + +G L
Sbjct: 246 EADLYDVECFRAMEATDSRFHYHPVLSEE--NWDGATGMVTDAV--LGDFASCRGHSAYL 301
Query: 266 CGQKQM 271
CG M
Sbjct: 302 CGPPAM 307
>gi|242277811|ref|YP_002989940.1| Na(+)-translocating NADH-quinone reductase subunit F [Desulfovibrio
salexigens DSM 2638]
gi|242120705|gb|ACS78401.1| NADH:ubiquinone oxidoreductase, subunit F [Desulfovibrio salexigens
DSM 2638]
Length = 408
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 19/171 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + L GD V IS G FA D ++ G+G++P+RS I F
Sbjct: 243 GQMSSFIYSLNPGDKVTISGPYGEFFARDTDA------EMIFIGGGAGMAPMRSHI---F 293
Query: 192 SSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETG 243
+R V +YGAR+L+ M Y ++F + E LS P + NW+G TG
Sbjct: 294 DQLKRLSTTRKVSYWYGARSLREMFYVEEFDKLAEECPNFNWYVALSDPLPEDNWTGYTG 353
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
++ + K P+ +CG MA V +++ +GV E I+ +
Sbjct: 354 FIHQVLYDNYIKDHPAPEDCEFYMCGPPMMASAVEKMLMDQGVEKENIMYD 404
>gi|407793870|ref|ZP_11140901.1| Na(+)-translocating NADH-quinone reductase subunit F [Idiomarina
xiamenensis 10-D-4]
gi|407214024|gb|EKE83875.1| Na(+)-translocating NADH-quinone reductase subunit F [Idiomarina
xiamenensis 10-D-4]
Length = 408
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK GD V IS G FA E +IF G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKPGDHVTISGPFGEFFA-------KETEAEMIFIGGGAGMAPMRSHI-- 292
Query: 190 GFSSKERSDVR----LYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGE 241
F R + + +YGAR+ K M Y + F +E ++ + QP+ NW G+
Sbjct: 293 -FDQLRRINTKRKMTFWYGARSKKEMFYVEDFDMLARENDNFDWHVALSDPQPEDNWEGD 351
Query: 242 TGYVQAA-FSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
TG++ + R K + P+ +CG M V +++ GV E I+
Sbjct: 352 TGFIHNVLYERYLKDHDAPEDCEFYMCGPPVMNAAVINMLKDLGVEDENIM 402
>gi|397171634|ref|ZP_10495034.1| FMN reductase [Alishewanella aestuarii B11]
gi|396086747|gb|EJI84357.1| FMN reductase [Alishewanella aestuarii B11]
Length = 235
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG---STAEVLC---GLKKG 144
AGQYLQL + K F +IAS P E + + AG S+A +L +G
Sbjct: 33 AGQYLQLCLTADDKRPF-SIASIPG----QDYLELHIGAPAGDNWSSAALLHLQQAFNQG 87
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V++ +G + + P V++ A G+G S + S+ + ++K+ V LY+G
Sbjct: 88 AAVQVEVGLGHAGWREHSERP-----VILLAGGTGFSYVHSIAMALAAAKQDKPVFLYWG 142
Query: 205 ARNLKRMAYQDKFKEWESSGVK--IVPVLSQPDGNWSGETGYVQAA 248
R + + YQ + ++W +S K +PV+ +P+ W G +G V A
Sbjct: 143 VRQEEALYYQTELQQWAASNAKYSFIPVVQEPNAAWQGRSGLVHEA 188
>gi|392937770|gb|AFM93933.1| OphA6 [Acinetobacter sp. OP5]
Length = 353
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 80 DAPDIASSHTRAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAE 136
DAP+ H +AGQY+ L++ D +G F ++A+ P+ S E ++ V G TA
Sbjct: 127 DAPE--GMHFQAGQYINLQLPDGIGSRAF-SVANAPAPGSE---IELNIRIVPGGRGTAY 180
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
V L+ G+ V I+ GR F + P V+ GSG+S RS+I +
Sbjct: 181 VHEQLQVGERVGITGPYGRFFVKKSARLP-----VIFMGGGSGLSSPRSMILDLLAQGFE 235
Query: 197 SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSRA 252
+ L YG RN + Y D+F + VP LS +P+G +W G G+V A A
Sbjct: 236 LPITLVYGQRNRDELYYHDEFLAMAEQYPNFTYVPALSHEPEGSSWPGFRGFVHEA---A 292
Query: 253 KKIFNP--QGTGVVLCGQKQMAEEVTSIVL 280
K F+ +G LCG M + S ++
Sbjct: 293 KAHFDNDFRGHKAYLCGPPLMIDACISTLM 322
>gi|21674073|ref|NP_662138.1| hydrogenase/sulfur reductase subunit gamma [Chlorobium tepidum TLS]
gi|21647226|gb|AAM72480.1| hydrogenase/sulfur reductase, gamma subunit [Chlorobium tepidum
TLS]
Length = 278
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 55 VWTPTPLAEISPAAE----SLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAI 110
+++P P+ +S AE + + + + ++ R G + V G+ TF +
Sbjct: 2 IYSPFPMRVVSKRAEAPGVNTLKLEFVKQEDHEFFKANYRTGMFGLYGVFGEGESTF-CV 60
Query: 111 ASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
ASP + E + +G L GD+V G F ++ E
Sbjct: 61 ASP---ETRKEYIECTFRQ-SGRVTSTLANTDAGDIVTFRGPYGNRFPIEEF----EGKN 112
Query: 171 VLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
+L A G + P RS+I S +E+ DV + YGAR + + Y+++ EW+ +
Sbjct: 113 LLFIAGGIALPPTRSVIWSCLDQREKYRDVTIVYGARTVADLVYKNELDEWKQRDDVRLV 172
Query: 230 VLSQPDG---NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSS 286
+ P G +W G+V +A +P+ T VLCG M + + + G ++
Sbjct: 173 LTVDPGGETPDWQDHVGFVPTVLEQAAP--SPENTIAVLCGPPIMIKFTLTALEKLGFTA 230
Query: 287 EKI 289
E +
Sbjct: 231 ENV 233
>gi|329120311|ref|ZP_08248979.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Neisseria bacilliformis
ATCC BAA-1200]
gi|327462652|gb|EGF08975.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Neisseria bacilliformis
ATCC BAA-1200]
Length = 337
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 16/199 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGD---VV 147
AGQY+ + + D G ++A P+ E ++ G + GL GD V
Sbjct: 133 AGQYIDILLKD-GHTRSYSLAGSPAHTEQ---LELHIRRREGG---LFSGLLFGDAPAVR 185
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E + + RG + D+ +++ ATG+G +P++S++ VRLY+G R
Sbjct: 186 EKTVMRVRGPMGTFVLREDDQSPLILLATGTGFAPVQSILHRLAEHDATRPVRLYWGGRT 245
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYV-QAAFSRAKKIFNPQGTGVV 264
L+ + Y D+ E PVLS+ NW G GYV Q A + Q V
Sbjct: 246 LEELYYHDRAAELAGRLKNAVFTPVLSRAPENWRGARGYVWQQALRDCPDLSAHQ---VY 302
Query: 265 LCGQKQMAEEVTSIVLAEG 283
CG M + + EG
Sbjct: 303 ACGSPAMIADAQRAFVEEG 321
>gi|365890468|ref|ZP_09428988.1| putative Ferredoxin--NAD(+) reductase; phenol hydroxylase (Phenol
2-monooxygenase P5 component) [Bradyrhizobium sp. STM
3809]
gi|365333625|emb|CCE01519.1| putative Ferredoxin--NAD(+) reductase; phenol hydroxylase (Phenol
2-monooxygenase P5 component) [Bradyrhizobium sp. STM
3809]
Length = 329
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVE 148
AGQY+ L + D ++A+ P + F++K ++++ GL G VV
Sbjct: 122 AGQYVDLTIDDGRITRAFSMANAPGEGTR---LSFIIKKYPNGAFSSQLDGGLGVGSVVM 178
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
G F + P +L+ GSG+SP+ S++ +S E+ +R +YGAR+
Sbjct: 179 AKGPYGTCFRREERSGP-----MLLIGGGSGMSPLWSILADHIASGEQRRIRFFYGARSR 233
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQG-TGV 263
+ Y ++ E + + VP LS + +W GETG+V +R K G
Sbjct: 234 ADLFYLEELAAIGRELNDFRFVPALSHATQEDHWDGETGFVHEVVARHLKQEKLVGEIDA 293
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
CG M + V ++ G+ + I
Sbjct: 294 YACGPTPMIDAVLPVLQVNGIEPDHI 319
>gi|269468115|gb|EEZ79825.1| 2-polyprenylphenol hydroxylase [uncultured SUP05 cluster bacterium]
Length = 335
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 93 QYLQLRVVDVGKPTF----LAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDV 146
QYL + +D+ P F +IA+ P S E ++ V G T + LK+ +
Sbjct: 130 QYLAGQYIDLIHPDFDPRAFSIANAPV---NSSLIELHIRLVEGGKFTNFLFNELKEKAL 186
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ + G + + + P V++ A G+G PI++++E + + +Y+G R
Sbjct: 187 LRLEGPKGTFYFKEDSKKP-----VILVAGGTGFGPIKAIVEHAIEINLKRQIYIYWGVR 241
Query: 207 NLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + Y + ++W E + + VPVLS+P+ W G TG+V S + G V
Sbjct: 242 DEVDL-YMNLPQQWVNEYNNIHFVPVLSEPNEQWKGRTGFVHE--SVLVDFDDLTGYEVY 298
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
CG M + L +G+ + +
Sbjct: 299 ACGPPTMVKAAADTFLDQGMIKDNFFSD 326
>gi|117619055|ref|YP_854627.1| FMN reductase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117560462|gb|ABK37410.1| NAD(P)H-flavin reductase (FMN reductase) [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 232
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ E+ ++++HV++ + + GQYL + + D K F +IA+ P+
Sbjct: 8 VEELREYVDTIWHVALT-----PLQEVSFKPGQYLLVVMSDSDKRPF-SIANSPT---RP 58
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G E + + +VL +++ +EI G+ F + P +++ A G+
Sbjct: 59 GMLELQIGATPENAYAGQVLARMREQGEIEIELAAGKAFLREESPRP-----LILMAGGT 113
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDG 236
G S RS++E + + V Y+G R + Q++ ++WE + +PV+ +P+
Sbjct: 114 GFSYARSILEYLIDTGSKRPVFFYWGVRQAHWLYEQEQMQQWERDYAPLTFIPVVQEPEV 173
Query: 237 NWSGETGYVQAA 248
+W+G+TG V A
Sbjct: 174 DWTGKTGLVHKA 185
>gi|255065658|ref|ZP_05317513.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria sicca ATCC 29256]
gi|255049976|gb|EET45440.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria sicca ATCC 29256]
Length = 335
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKS-VAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G E ++ G +E++ G +K+
Sbjct: 131 AGQYIDLLLPGNVSRSY-SIANSPD---QEGILELHIRRRENGVCSEMIFGSEPKVKEKG 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V I +G F + D +++ ATG+G +PIRS++ + V Y+GA
Sbjct: 187 IVRIKGPLG-SFTLQE----DSGKPIILLATGTGYAPIRSILLNLIRQDSSRAVHFYWGA 241
Query: 206 RNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R+ + ++ +E + PVLS+ W GE GYVQ A AK + G V
Sbjct: 242 RHQDDLYALEEAQELTGRLKNARFTPVLSKTAEGWQGEKGYVQTA--AAKDYPDLSGYEV 299
Query: 264 VLCGQKQMAEEVTSIVLAE 282
CG M E S++ A+
Sbjct: 300 YACGSVAMTESAKSVLTAQ 318
>gi|187929772|ref|YP_001900259.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Ralstonia pickettii 12J]
gi|187726662|gb|ACD27827.1| oxidoreductase FAD/NAD(P)-binding domain protein [Ralstonia
pickettii 12J]
Length = 349
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G + + G K+G
Sbjct: 134 AGQYVEFLLRD-GKRRSYSIANPPH---DDGPIELHIRHMPGGVFTDYVFGAKEGAPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFIGSTRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+G R + + K +EW + VPV+S P+ W+G TG+V A
Sbjct: 245 WGGRRPQDLYMHAKAEEWARTLPNFTYVPVVSNALPEDAWTGRTGFVHQA 294
>gi|327200832|gb|AEA36117.1| phenol hydroxylase subunit P6 [uncultured bacterium]
Length = 355
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+AGQY+ L + G +IAS P+ A E ++ V G T V L++G+ V
Sbjct: 133 QAGQYINLHIPGEGASRAFSIASSPARADE---IELNIRHVPGGRGTGWVHEQLRQGERV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+++ GR F V E L A GSG+S RS++ +S + L GAR+
Sbjct: 190 QLAGPYGR-FFVRESAHRKEGHGYLFLAGGSGLSSPRSMVLDLLASGCNRPITLINGARS 248
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS-QPDG-NWSGETGYVQAAFSRAKKIFNP--QGT 261
+ + + D+F E V LS +P+G +W+G G+V A AK F+ +G
Sbjct: 249 REELYHHDEFTRLAAEHPNFTYVAALSGEPEGSDWAGARGFVHDA---AKAHFDNDFRGH 305
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M E + ++
Sbjct: 306 KAYLCGPPLMIEACITTLM 324
>gi|440288955|ref|YP_007341720.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440048477|gb|AGB79535.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 407
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSG----VKIVPVLSQPDGNWSGETGYVQ 246
+ + +YGAR+L+ M YQD+F++ I + P+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSLREMFYQDEFEQLARDNPNFTFHIALSDALPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E I+
Sbjct: 356 NVLYENYLRDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|443288272|ref|ZP_21027366.1| Phenylacetic acid degradation NADH oxidoreductase paaE
[Micromonospora lupini str. Lupac 08]
gi|385888602|emb|CCH15440.1| Phenylacetic acid degradation NADH oxidoreductase paaE
[Micromonospora lupini str. Lupac 08]
Length = 369
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 90 RAGQYLQLR-VVDVGKPTF--LAIASPPSFASASGAFEFLVKSV-AGSTAEVLCG-LKKG 144
RAGQ+L +R V D G +I S P + G V+ + G+ + CG L++G
Sbjct: 48 RAGQHLTVRRVTDDGDDVRRSYSICSTPDDLARRGRLRIGVREIPGGAFSAFACGALRRG 107
Query: 145 DVVEISQVMGR---GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRL 201
D VE+ +G FA DR++ Y V+ GSGI+P+ +L+ + + + S L
Sbjct: 108 DTVEVMTPLGTFTTAFAADRVR---HYGAVV---AGSGITPVLALVGTALAVEPASTFTL 161
Query: 202 YYGARNLKRMAYQDK---FKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
YG R R+ + ++ K+ + + +V VLS+ G +G + A R +++
Sbjct: 162 VYGNRTANRVMFAEELADLKDRYPTRLHLVHVLSREQGESPLLSGRIDA--ERLERLLGT 219
Query: 259 QGTGVV-----LCGQKQMAEEVTSIVLAEGV 284
G V LCG M E ++ A G+
Sbjct: 220 IVPGDVIEEWFLCGPYGMVVEARDVLTARGL 250
>gi|269119183|ref|YP_003307360.1| sulfite reductase subunit B [Sebaldella termitidis ATCC 33386]
gi|268613061|gb|ACZ07429.1| sulfite reductase, subunit B [Sebaldella termitidis ATCC 33386]
Length = 266
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF V D ++GQ++Q+ + VG+ A S +F G +FL++
Sbjct: 22 EWLFRVKFD---------KKVKSGQFIQISIPKVGE----APISIANFNEREGWIDFLIR 68
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
V T E+ + G+ + + G GF+++ E ++I A GSG++P+R +IE
Sbjct: 69 KVGKVTDEIF-NKQAGEKLFLRGPYGNGFSIENF----ENKHLVIVAGGSGVAPVRPIIE 123
Query: 189 SGFSSKER-SDVRLYYGARNLKRMAYQDKFKEW 220
+ ++E+ R+ G ++L+ + ++D F W
Sbjct: 124 HFYENREKLKSFRMIAGFKDLESVIFKDDFTRW 156
>gi|86138117|ref|ZP_01056692.1| Na(+)-translocating NADH-quinone reductase subunit F [Roseobacter
sp. MED193]
gi|85825144|gb|EAQ45344.1| Na(+)-translocating NADH-quinone reductase subunit F [Roseobacter
sp. MED193]
Length = 407
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 AGLMSSYIFNLKPGDKVTISGPFGEFFARDTQK------EMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
E D + +YGAR+ K M + + F KE+++ + + P+ +W G TG+
Sbjct: 294 LKRLENRDRKISFWYGARSKKEMFFVEDFDTLAKEFDNFDWHVALSDAMPEDDWEGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++++ GV E I+
Sbjct: 354 IHNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLVDLGVDREDIM 401
>gi|350638450|gb|EHA26806.1| hypothetical protein ASPNIDRAFT_35769 [Aspergillus niger ATCC 1015]
Length = 475
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 16/239 (6%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
D W P + + + A +++H+ + + DI T GQ++ LR G +
Sbjct: 229 DPRQWRPFTMTQKTEIAPNVYHIVFSLPNPDDILGLPT--GQHIALRATINGTSVARSY- 285
Query: 112 SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S + G E LVK+ G+ + L ++ GD +EI RG P
Sbjct: 286 TPISNNNDRGRIELLVKAYPLGAMTQHLAQMRLGDTIEI-----RGPKGAMQYSPRYAKH 340
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVR--LYYGARNLKR----MAYQDKFKEWESSG 224
+ + A G+GI+P+ LI + +D R L Y A N K A + F
Sbjct: 341 IGMIAGGTGITPMYQLIRAICEDPTDTDTRISLLY-ANNTKEDILLRAELEAFARNHPDR 399
Query: 225 VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
++ VLS+PD +W+G G+V A + ++LCG M + ++L G
Sbjct: 400 FQVHYVLSRPDDSWTGYRGFVSAELIQKHLPVAGPDNKMLLCGPPPMVGAMKKVLLDLG 458
>gi|373856260|ref|ZP_09599005.1| oxidoreductase FAD/NAD(P)-binding domain protein [Bacillus sp.
1NLA3E]
gi|372454097|gb|EHP27563.1| oxidoreductase FAD/NAD(P)-binding domain protein [Bacillus sp.
1NLA3E]
Length = 340
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 123 FEFLVKSVA-GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
+F VK + G+ + +C L+ G V S G+ +DR + ++ A GSG++
Sbjct: 172 LDFHVKRIENGAGSNYMCDLQPGATVTGSGPYGKMQLIDREKD------LIFIAGGSGMA 225
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLS-QP-DGN 237
PI++L+E F+ + +YGAR + +++ + E VP LS QP D
Sbjct: 226 PIKALVEELFNGLYQHQAWFFYGARTKDDLFLTEQWNQLERDYPNFHFVPALSDQPNDEE 285
Query: 238 WSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W GETGY+ K + + LCG + E VT+ + G+ I +
Sbjct: 286 WLGETGYIANVVE--KYLSDVSQMDAYLCGPPILIETVTNTLYKGGLRRSNIFSD 338
>gi|408420330|ref|YP_006761744.1| anaerobic sulfite reductase, subunit B [Desulfobacula toluolica
Tol2]
gi|405107543|emb|CCK81040.1| AsrB2: predicted anaerobic sulfite reductase, subunit B
[Desulfobacula toluolica Tol2]
Length = 281
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 23/208 (11%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+ L + VG+ + IAS P GA +F V G L +KKGD + I
Sbjct: 45 GQFAMLSIPCVGEIP-IGIASAPC---EQGAVKFTVFK-TGKVTSFLHNMKKGDEMGIRG 99
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNL 208
G GF + ++ + +LI G + +RSLI++ R D + + YGARN
Sbjct: 100 PFGNGFPLKEMKDKN----LLIIGGGFAFTTLRSLIKTLLQPGVRKDFNQIDVVYGARNP 155
Query: 209 KRMAYQDKFKEWES-SGVKI-VPVLSQPDGNWSGETGY----VQAAFSRAKKIFNPQGTG 262
+ Y+++ +W + + + V + D NW TG+ VQ R N T
Sbjct: 156 GMLLYREELADWNKRDDIHMHITVDTTDDENWPYHTGFVPTVVQECVPR-----NDNNTM 210
Query: 263 VVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++CG M + ++ S E+IL
Sbjct: 211 AIVCGPPVMIKFTRPVLTDLDYSDEEIL 238
>gi|119775666|ref|YP_928406.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
amazonensis SB2B]
gi|119768166|gb|ABM00737.1| NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
[Shewanella amazonensis SB2B]
Length = 418
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTNAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW+G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWNGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 366 HNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVIAMLKDLGVEDENIL 412
>gi|334143154|ref|YP_004536310.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thioalkalimicrobium cyclicum ALM1]
gi|333964065|gb|AEG30831.1| oxidoreductase FAD/NAD(P)-binding domain protein
[Thioalkalimicrobium cyclicum ALM1]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 92 GQYLQLRVV-DVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
G YL + V D KP +IA+ P G E ++ S + L + GD + I
Sbjct: 32 GDYLMMGVHPDSLKP--FSIANAPR---EDGFLEMHIRLNQDSWLQELAQQQVGDHLWID 86
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
++++ E P L A G+G++PI++LIE+ + LY+GA ++
Sbjct: 87 G------PHNQMKLMSEQPLNLFIAGGTGLAPIKALIEAQLAQGLTQPTWLYWGASYVED 140
Query: 211 MAYQDKFKEWESSG----VKIVPVLSQPDG----NWSGETGYV-QAAFSRAKKIFNPQGT 261
+D +W G V VPVLS D NW G+ G V Q A + + Q
Sbjct: 141 FYLRD--PQWWPKGLHERVHFVPVLSNEDQAKTVNWQGKLGLVHQVALAEHPDLSQAQ-- 196
Query: 262 GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
V +CG +M + V + LA G+ +E+I
Sbjct: 197 -VYVCGAWEMIKTVKADCLAAGLPAERI 223
>gi|90408357|ref|ZP_01216520.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychromonas
sp. CNPT3]
gi|90310520|gb|EAS38642.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychromonas
sp. CNPT3]
Length = 406
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA Q +E ++ G+G++P+RS I
Sbjct: 241 CGKMSSYIFSLKEGDKVTISGPFGEFFAQ---QTENE---MVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSSKE-RSDVRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETGYV 245
F E + V +YGAR+ + M Y + F E E+ + QP+ NW G TG++
Sbjct: 295 FRRLETKRKVSFWYGARSKREMFYVEDFDQIAAENENFSWNVALSDPQPEDNWEGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E I+
Sbjct: 355 HNVLLENYLKDHEAPEDCEFYMCGPPIMNAAVIAMLKDLGVEDENIM 401
>gi|397661616|ref|YP_006502316.1| CDP-6-deoxy-l-threo-d-glycero-4-hexulose-3-dehy drase reductase
[Taylorella equigenitalis ATCC 35865]
gi|394349795|gb|AFN35709.1| CDP-6-deoxy-l-threo-d-glycero-4-hexulose-3-dehy drase reductase
[Taylorella equigenitalis ATCC 35865]
Length = 345
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIV 228
++ ATG+G +PI++++E S + LY+G RN K + D K +E+ + K V
Sbjct: 211 IIFLATGTGFAPIKAILEDMVESGIKRSSTLYWGGRNKKDIYMMDFCKNFEAQHNWFKFV 270
Query: 229 PVLSQPDGN--WSGETGYVQ 246
PVLS PD + W G GYVQ
Sbjct: 271 PVLSNPDASEAWDGRVGYVQ 290
>gi|374372112|ref|ZP_09629976.1| CDP-6-deoxy-delta-3,4-glucoseen reductase, partial [Cupriavidus
basilensis OR16]
gi|373096341|gb|EHP37598.1| CDP-6-deoxy-delta-3,4-glucoseen reductase, partial [Cupriavidus
basilensis OR16]
Length = 322
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG-LKKGDVV 147
AGQYL +++ G +IA+PP+ A+ A E ++ G T V G ++ G ++
Sbjct: 133 AGQYLDF-LLENGVRRSYSIATPPA-AAGLIALELHLRHTPGGVFTDPVFEGEIQPGQIL 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G ++ + P V + A+G+G +PI+++I K + LY+G R
Sbjct: 191 QFEAPLG----TFHLREESDKPIVFV-ASGTGFAPIKAIIGYIIRRKIMRPMTLYWGGRQ 245
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + + + WES G K VPVLS+ P W G TG+V A + + G V
Sbjct: 246 RRDLYMDELARGWESEWPGFKYVPVLSEATPQDAWQGRTGFVHRAVMQDYPDLS--GHQV 303
Query: 264 VLCGQKQMAE 273
CG M E
Sbjct: 304 YACGAPVMVE 313
>gi|527552|emb|CAA56745.1| subunit of phenolhydroxylase [Pseudomonas putida]
Length = 353
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L + + ++A+PPS A E ++ V G +T + LK GD V
Sbjct: 133 QAGQYINLTLPGIEGSRAFSLANPPSQADE---VELHIRLVEGGAATGFIHRQLKVGDAV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+S G+ F V Q D ++ A GSG+S +S++ + + + L+ GARN
Sbjct: 190 ELSGPYGQ-FFVRGSQAGD----LIFIAGGSGLSSPQSMVFDLLAQGDTRQITLFQGARN 244
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ ++ F+E + S VP L+Q D W G G+V A AK F+ + +G
Sbjct: 245 RAELYNRELFEELAARHSNFSYVPALNQAHDDPEWQGFKGFVHDA---AKAHFDGRFSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + + ++
Sbjct: 302 KAYLCGPPPMIDAAITTLM 320
>gi|345887767|ref|ZP_08838927.1| hypothetical protein HMPREF0178_01701 [Bilophila sp. 4_1_30]
gi|345041471|gb|EGW45622.1| hypothetical protein HMPREF0178_01701 [Bilophila sp. 4_1_30]
Length = 278
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 72 FHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV- 130
F V D D + + + GQ QL V VG+ TF+ +SP ++L SV
Sbjct: 28 FRVRFD--DEEKMKNFTFQPGQVGQLSVFGVGESTFVINSSPTRM-------DYLQFSVM 78
Query: 131 -AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
AG L L GD + + +G F ++ + + V G G++PIR+++
Sbjct: 79 KAGENTAALHKLNAGDKIGVRAPLGNWFPYEQWKGKN----VFFIGGGIGMAPIRTIMVY 134
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQA 247
+ K+ D+ L YGA+ +++Q EW E + + + P W + G +
Sbjct: 135 LLDNRKDYGDISLLYGAKTPADLSFQSDMPEWLERKDLNVTLTIDNPADGWEHKVGLIPN 194
Query: 248 AFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
P+ T VLCG M + + ++ G ++I
Sbjct: 195 VLKEIGP--KPKDTIAVLCGPPIMIKFTLAALVELGFPDDQI 234
>gi|395652035|ref|ZP_10439885.1| phenol 2-monooxygenase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 353
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 80 DAPDIASSHTRAGQYLQLRVVD-VGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAE 136
DAP+ H +AGQY+ L++ D +G F ++A+ P+ S E ++ V G TA
Sbjct: 127 DAPE--GMHFQAGQYINLQLPDGIGSRAF-SVANAPAPGSD---IELNIRVVPGGRGTAY 180
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
V L+ G+ V I+ GR F P V+ A GSG+S RS+I +
Sbjct: 181 VHEQLQVGERVGITGPYGRFFVKKSAHLP-----VIFMAGGSGLSSPRSMILDLLADGFA 235
Query: 197 SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRA 252
+ L YG R+ + Y D+F + VP LS D +W G G+V A A
Sbjct: 236 LPITLVYGQRHRAELYYHDEFLALAAQHPNFTYVPALSHELEDSSWQGFRGFVHDA---A 292
Query: 253 KKIFNP--QGTGVVLCGQKQMAEEVTSIVL 280
K F+ +G LCG M + S ++
Sbjct: 293 KAHFDNDFRGHKAYLCGPPLMIDACISTLM 322
>gi|393762837|ref|ZP_10351462.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
agri BL06]
gi|397169594|ref|ZP_10493026.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
aestuarii B11]
gi|392606241|gb|EIW89127.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
agri BL06]
gi|396088898|gb|EJI86476.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
aestuarii B11]
Length = 408
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 CGKMSSFIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V LS QP+ NW+G TG++
Sbjct: 296 LRRLKSKRKISFWYGARSKREMFYVEDFDMLAAENENFVWHTALSDPQPEDNWTGYTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++ GV + IL
Sbjct: 356 HNVIYENYLKNHKAPEDCEFYMCGPPMMNKAVINMLKDLGVEDDNIL 402
>gi|424775466|ref|ZP_18202459.1| phenol 2-monooxygenase [Alcaligenes sp. HPC1271]
gi|422889176|gb|EKU31556.1| phenol 2-monooxygenase [Alcaligenes sp. HPC1271]
Length = 353
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L V + +IA+PPS SG + V+ V G T + L+ G +
Sbjct: 133 QAGQYINLHVPSIDSTRAFSIANPPSM---SGIIDLHVRKVEGGAGTTWLHEELEVGQSL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++S G+ F ++ D + I A GSG+S S+I + + L+ GARN
Sbjct: 190 DVSGPYGQFF----VRKSDPQGAIFI-AGGSGLSSPESMIMDLLEEGDTRPIYLFQGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + D F + + +P L+ PD W G G+V A + F + +G
Sbjct: 245 KAELYHADHFYQLAEKHDNFHYIPALNAPLPDDAWEGFVGFVHEAVG---QFFEQRCSGN 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M E S ++
Sbjct: 302 KAYLCGPPPMIEAAISTLM 320
>gi|374367169|ref|ZP_09625237.1| phenol hydroxylase P5 protein [Cupriavidus basilensis OR16]
gi|373101363|gb|EHP42416.1| phenol hydroxylase P5 protein [Cupriavidus basilensis OR16]
Length = 355
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 23/215 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQYL L V +P ++A+ P E V+ V G +TA + L GD +
Sbjct: 134 QAGQYLNLHVPGCDQPRAFSLANRP----GDELVELHVRRVEGGQATAYLHEQLSVGDEL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
S GR F + P +L A GSG+S R++I + E + L GARN
Sbjct: 190 GFSAPYGRFFVRKSARKP-----MLFLAGGSGLSSPRAMILDMLGAGETLPITLVQGARN 244
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQ---AAFSRAKKIFNPQG 260
+ Y + F+ + + VP LS D W G GYV + +G
Sbjct: 245 RTELYYDEAFRALAGAHPNFRYVPALSDEPADSGWDGARGYVHDVLHGLYAHGATADFRG 304
Query: 261 TGVVLCGQKQMAEEVTSIVL-----AEGVSSEKIL 290
LCG M E ++ E + +EK +
Sbjct: 305 HKAYLCGPPPMIEACIRTLMQGRLFEEDIHTEKFI 339
>gi|319779378|ref|YP_004130291.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Taylorella equigenitalis
MCE9]
gi|317109402|gb|ADU92148.1| CDP-6-deoxy-delta-3,4-glucoseen reductase-like protein [Taylorella
equigenitalis MCE9]
Length = 345
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIV 228
++ ATG+G +PI++++E S + LY+G RN K + D K +E+ + K V
Sbjct: 211 IIFLATGTGFAPIKAILEDMVESGIKRSSTLYWGGRNKKDIYMMDFCKNFEAQHNWFKFV 270
Query: 229 PVLSQPDGN--WSGETGYVQ 246
PVLS PD + W G GYVQ
Sbjct: 271 PVLSNPDASEAWDGRVGYVQ 290
>gi|348030264|ref|YP_004872950.1| oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region
[Glaciecola nitratireducens FR1064]
gi|347947607|gb|AEP30957.1| Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
[Glaciecola nitratireducens FR1064]
Length = 283
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+ L V G F + P + G F L++ V G + L LKKGD++ +
Sbjct: 40 GQFFMLTVPGAGLAPFTYTSLPDN----QGRFTALIRKV-GKLTDKLFTLKKGDLLGYNG 94
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRM 211
G G+ V +I + VLI A G G++P+ + I+ + + V L Y AR+ +
Sbjct: 95 PHGNGWPVAQIHQKE----VLIVAGGCGLAPVSTAIDYLIEAGRAASVTLLYAARDKESQ 150
Query: 212 AYQDKFKEWESSGVKIVPVL-SQPDGNWSG-ETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ + W S +K+ L +Q D SG T Y+ S+ + Q ++ CG +
Sbjct: 151 VLKQERARWNSK-IKVFETLDTQGDRGHSGLPTQYLSTVLSQCHR----QPNMLLTCGPE 205
Query: 270 QMAEEVTSIVLAEGVSSEKI 289
M +++ + L G S I
Sbjct: 206 AMMKDIAKMCLGLGFESSDI 225
>gi|85711087|ref|ZP_01042147.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina baltica OS145]
gi|85695000|gb|EAQ32938.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Idiomarina baltica OS145]
Length = 544
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 23/211 (10%)
Query: 91 AGQYLQLRVVDVGK--PTFLAIASPPSFASASGAFEFLVKSVA--------GSTAEVLCG 140
AGQ++Q R+ + + ++A+ P F F ++ + G + LC
Sbjct: 338 AGQFMQFRIPHINEILSRHYSVATRPH----PTQFVFNIRQLPSPSEGIPPGIGSNYLCN 393
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
L+ G V+ G D T + G+G++P+R+LI+S ++
Sbjct: 394 LEAGARVDAVGPFG-----DFQLTKQNSHTQVFIGGGAGVAPLRALIQSELAADSPRRCI 448
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP 258
+YGAR K + Y+++F+ E + +PVLS+ +W+G TG+V + N
Sbjct: 449 FFYGARYEKELCYRNEFEREER--LTYIPVLSESAKSDDWTGPTGFVHETAMKWLAGKNK 506
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + +CG M E + GV E+I
Sbjct: 507 ETLDIYVCGPPPMLEATLKSLADFGVPRERI 537
>gi|375110925|ref|ZP_09757139.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
jeotgali KCTC 22429]
gi|374568957|gb|EHR40126.1| Na(+)-translocating NADH-quinone reductase subunit F [Alishewanella
jeotgali KCTC 22429]
Length = 408
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 CGKMSSFIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V LS QP+ NW+G TG++
Sbjct: 296 LRRLKSKRKISFWYGARSKREMFYVEDFDMLAAENENFVWHTALSDPQPEDNWTGYTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++ GV + IL
Sbjct: 356 HNVIYENYLKNHKAPEDCEFYMCGPPMMNKAVINMLKDLGVEDDNIL 402
>gi|338214454|ref|YP_004658515.1| fatty acid hydroxylase [Runella slithyformis DSM 19594]
gi|336308281|gb|AEI51383.1| fatty acid hydroxylase [Runella slithyformis DSM 19594]
Length = 603
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTF--LAIASPPSFAS 118
+A+I A+ F +I ++ P I + AGQ+L ++V G+ + +I+S P+
Sbjct: 269 VADIRQEADDAF--TIQFNNVPSIFRDFS-AGQHLTIKVNIKGETQYRTFSISSIPN--- 322
Query: 119 ASGAFEFLVKSV-AGSTAEVLCG-LKKGDVVEISQVMGRGFAVDRIQP-PDEYPTVLIFA 175
+K V G L G LK GD +E++ G+ + + P P ++ A
Sbjct: 323 VDNYLTMTIKRVKGGKVTNYLAGNLKVGDTLEVTAPSGQFY----LNPEPSHQKHYVMIA 378
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWE---SSGVKIVPVLS 232
GSGI+PI S+I + + +S + L Y +RN + ++ F W S+ ++I LS
Sbjct: 379 GGSGITPIYSMIGTILRFEPKSKITLLYASRNSNSIIFKKNFNNWLKEFSTQLEIKHFLS 438
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTG---VVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + GY+ +++ N G LCG + + ++ ++ GV +E+I
Sbjct: 439 EEENPGGAVKGYITRI--SVEELVNRYGKNKLEFYLCGPEVLTNKLIDDLVYIGVPNEQI 496
>gi|399115010|emb|CCG17806.1| CDP-6-deoxy-l-threo-d-glycero-4-hexulose-3-dehy drase reductase
[Taylorella equigenitalis 14/56]
Length = 345
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIV 228
++ ATG+G +PI++++E S + LY+G RN K + D K +E+ + K V
Sbjct: 211 IIFLATGTGFAPIKAILEDMVESGIKRSSTLYWGGRNKKDIYMMDFCKNFEAQHNWFKFV 270
Query: 229 PVLSQPDGN--WSGETGYVQ 246
PVLS PD + W G GYVQ
Sbjct: 271 PVLSNPDASEAWDGRVGYVQ 290
>gi|270489556|ref|ZP_06206630.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis KIM D27]
gi|384415796|ref|YP_005625158.1| Na+-translocating NADH-quinone reductase subunit F, partial
[Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420790787|ref|ZP_15261623.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-90]
gi|270338060|gb|EFA48837.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis KIM D27]
gi|320016300|gb|ADV99871.1| Na+-translocating NADH-quinone reductase subunit F [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|391660409|gb|EIS96573.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-90]
Length = 208
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 82 PDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE--VLC 139
P A AGQY+ L + G+ +IA+ P +G E V+ V +
Sbjct: 2 PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG---GNGNIELHVRKVVNGVFSNIIFN 56
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDV 199
LK ++ I G F + D P V + A G+G +P++S++E+ + ++ V
Sbjct: 57 ELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-AGGTGFAPVKSMVEALINKNDQRQV 110
Query: 200 RLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSR--- 251
+Y+G N Y D EW + + VPV+S D W+G TG+V A
Sbjct: 111 HIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPVVSGDDSTWTGATGFVHQAVLEDIP 166
Query: 252 AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+FN V CG M + + G++ K +
Sbjct: 167 DLSLFN-----VYACGSLAMITAARNDFINHGLAENKFFSD 202
>gi|260430726|ref|ZP_05784698.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418167|gb|EEX11425.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 406
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 241 GQMSSYIFSLKPGDKVTISGPFGEFFARDTDK------EMVFIGGGAGMAPMRSHIFDQL 294
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ + LS QP NW G TG++
Sbjct: 295 KRLKTKRKITFWYGARSRREMFYVEDFDQLAAENENFEWHVALSDPQPGDNWEGFTGFIH 354
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 355 NVLYEQYLKDHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIM 400
>gi|72382514|ref|YP_291869.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str.
NATL2A]
gi|72002364|gb|AAZ58166.1| ferredoxin-NADP oxidoreductase, PetH [Prochlorococcus marinus str.
NATL2A]
Length = 381
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+++ G + LC L GD V+IS +G+ + + P +E +++ ATG+GI+P+R+ +
Sbjct: 190 ETINGVCSTYLCNLSPGDKVKISGPVGK----EMLLPEEEDSNIIMLATGTGIAPMRAYL 245
Query: 188 ESGFSSKE--------RSDVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDG 236
F E + L+ GA + Y F+ ++S ++ +S+
Sbjct: 246 RRMFEPTEIEKHQWNFKGKAWLFMGAPKTANLLYDADFEHYKSKFPENLRYTKAISREQN 305
Query: 237 NWSGETGYVQ-AAFSRAKKIF----NPQGTGVVLCGQKQMA----EEVTSIVLAEGVS 285
N G Y+Q A++IF NP+ T + LCG K M E +T+ A+G+
Sbjct: 306 NTKGGRMYIQDRVLEHAEEIFDMIENPK-THIYLCGLKGMEPGIDEAMTTAASAKGLD 362
>gi|114564367|ref|YP_751881.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
frigidimarina NCIMB 400]
gi|114335660|gb|ABI73042.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella frigidimarina
NCIMB 400]
Length = 405
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F ++ D ++ G+G++P+RS I +
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--AEMVFVGGGAGMAPMRSHIFNQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
S K + + +YGAR+ + + YQ F + + V LS P+ NW+G TG++
Sbjct: 294 KSVKTKRKMSFWYGARSTREVFYQQDFDQLAAENDNFVWHVALSDPLPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ +CG M V +++ + GV SE IL
Sbjct: 354 TVLYENYLKQHKAPEDCEFYMCGPPIMNASVIAMLESLGVESENIL 399
>gi|3445537|gb|AAC32457.1| phenol hydroxylase component [Ralstonia sp. E2]
Length = 356
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 19/201 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQYL L+V +P ++A+ P E V+ V G +T + L GD +
Sbjct: 134 QAGQYLNLQVPGCDQPRAFSLANAPD----EELVELHVRKVEGGQATGYLHERLAVGDAL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
S GR F Q P +L A GSG+S R++I ++ E + L GARN
Sbjct: 190 RFSAPYGRFFVRRSAQAP-----MLFLAGGSGLSSPRAMIRELLAAGETLPITLVQGARN 244
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAA----FSRAKKIFNPQ 259
+ +D+F+ + VP LS D W G G+ A ++ + +
Sbjct: 245 RAELYGEDEFRALAERHPNFRYVPALSDEPADSAWQGARGFAHEALAALYADGDGRADFR 304
Query: 260 GTGVVLCGQKQMAEEVTSIVL 280
G LCG M E ++
Sbjct: 305 GHKAYLCGPPPMIEACIRTLM 325
>gi|336415004|ref|ZP_08595347.1| hypothetical protein HMPREF1017_02455 [Bacteroides ovatus
3_8_47FAA]
gi|423295149|ref|ZP_17273276.1| hypothetical protein HMPREF1070_01941 [Bacteroides ovatus
CL03T12C18]
gi|335941865|gb|EGN03716.1| hypothetical protein HMPREF1017_02455 [Bacteroides ovatus
3_8_47FAA]
gi|392673665|gb|EIY67121.1| hypothetical protein HMPREF1070_01941 [Bacteroides ovatus
CL03T12C18]
Length = 280
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +I+ A + + D + + H +AGQ+ + G+ TF +SP +
Sbjct: 15 IEKITHEAPGVKTFRLRFKDEKEGEAFHFKAGQFGEYSAFGEGESTFCIASSP----TRK 70
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
G E + AG L L++G V G F +D + + +L A G +
Sbjct: 71 GYIECTFRQ-AGRVTTGLAKLEEGATVGFRGPFGNTFPLDEWKGKN----LLFVAGGIAL 125
Query: 181 SPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDG--- 236
P+R +I + +E D+ + YGA+++ + Y+++ KEWE+ + P G
Sbjct: 126 PPMRCVIWNALDRREDFKDITIVYGAKSVNDLVYKEELKEWENRPDVNLITTVDPGGETP 185
Query: 237 NWSGETGYVQAAFSRA 252
+W+G+ G+V + A
Sbjct: 186 DWTGKVGFVPSVLEAA 201
>gi|421725214|ref|ZP_16164412.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca M5al]
gi|410374001|gb|EKP28684.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca M5al]
Length = 407
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA + ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA------KETQAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SSKERS-DVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
S + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 296 KRLHSSRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHTGFIH 355
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ P+ +CG M V ++ GV E I+
Sbjct: 356 NVLCENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIM 401
>gi|257802576|gb|ACS74440.1| phenol hydroxylase protein reductase [Acinetobacter sp. G16(2009)]
Length = 353
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVV 147
+AGQY+ ++ + +IA+ PS G E ++ V G +A L GD +
Sbjct: 133 QAGQYINVQFPGIEGTRAFSIANAPS---ELGIIELHIRHVVGGSATTYVHEQLAAGDAL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
EIS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 EISGPYGQFF----VRKSDDQDAIFI-AGGSGLSSPQSMILDLLESGDTRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
+ + ++ F++ + + +P L+ P + +W+G TGYV A + F + G
Sbjct: 245 VAELYNRELFEQLVKDYPNFRYIPALNAPKAEDHWTGFTGYVHEAVA---DYFEQRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPVMIDAAISTLM 320
>gi|257802574|gb|ACL31147.1| phenol hydroxylase protein [Acinetobacter sp. MO]
Length = 353
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGDVV 147
+AGQY+ ++ + +IA+ PS G E ++ V G +A L GD +
Sbjct: 133 QAGQYINVQFPGIEGTRAFSIANAPS---ELGIIELHIRHVVGGSATTYVHEQLAAGDAL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
EIS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 EISGPYGQFF----VRKSDDQDAIFI-AGGSGLSSPQSMILDLLESGDTRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
+ + ++ F++ + + +P L+ P + +W+G TGYV A + F + G
Sbjct: 245 VAELYNRELFEQLVKDYPNFRYIPALNAPKAEDHWTGFTGYVHEAVA---DYFEQRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPVMIDAAISTLM 320
>gi|254786011|ref|YP_003073440.1| Na(+)-translocating NADH-quinone reductase subunit F
[Teredinibacter turnerae T7901]
gi|237683890|gb|ACR11154.1| NADH:ubiquinone oxidoreductase, F subunit [Teredinibacter turnerae
T7901]
Length = 407
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + GLK GD + + G FA D ++ G+G++P+RS I
Sbjct: 242 GKMSSYVFGLKPGDKITVYGPFGEFFAKDTNN------EMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + +YGAR+L+ M Y +++ + S V ++ QP+ NW G TG++
Sbjct: 296 RRLKTDRKMSFWYGARSLREMFYAEEYDQLASENENFVWHVALSDPQPEDNWEGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 356 NVLYENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIL 401
>gi|217977813|ref|YP_002361960.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Methylocella silvestris BL2]
gi|217503189|gb|ACK50598.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylocella
silvestris BL2]
Length = 351
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCGLKKGDVVEI 149
AGQY + + D ++ +PP + EF++K G + L L G V +
Sbjct: 144 AGQYADITLPDGATTRSYSMGNPPRDPTR---LEFIIKKYEGGRFSSQLDTLAPGAKVTV 200
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
S G F R + D+ P +LI GSG++P+ +++E + + +RL+YGAR
Sbjct: 201 SGPYGTCF---RREHRDDSPLLLI-GGGSGLAPLLAILEDQIAEAPQRSIRLFYGARTQA 256
Query: 210 RMAYQDKFK--EWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFN-PQGTGVV 264
+ +Q +F+ E E + VP LS DG WSGE G++ R K G
Sbjct: 257 DLFWQKRFEALEAELPDFRFVPALSAAPDDGQWSGERGFIHEVVQRGLKAEGIGDGADAY 316
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKI 289
CG + + V ++ GV ++I
Sbjct: 317 ACGPPPLIDAVMPVLQMAGVEPDRI 341
>gi|406987191|gb|EKE07605.1| hypothetical protein ACD_18C00030G0002 [uncultured bacterium]
Length = 231
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA-EVLCGLKKGDVVEIS 150
GQ+LQ+ +D+ + +I S PS + +K + G A E++ + + + IS
Sbjct: 39 GQFLQIFFIDIKRS--YSIFSKPS----DETIDLCIKCLEGGKASEIIKNITVEEKITIS 92
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLK 209
MG F ++ Y ATGSGI+PI S++ + + +S + L +G R +
Sbjct: 93 DPMGH-FIINEDDIERTY-----VATGSGIAPIVSMLRTSLEDYRHKSKIYLLFGIRYEE 146
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ Y + ++ ++ LS+P NW G +G V A KI + + LCG
Sbjct: 147 DIFYIKELEKLSNTYKNFSFDFTLSRPSENWKGNSGRVSAHL--PSKITDKKNNQFYLCG 204
Query: 268 QKQMAEEVTSIVLAEGVSSEKI 289
M +++ +++ + + I
Sbjct: 205 SPDMVKDIRKLLIDSDIDMKNI 226
>gi|260550004|ref|ZP_05824219.1| phenol hydroxylase component [Acinetobacter sp. RUH2624]
gi|424056219|ref|ZP_17793740.1| phenol hydroxylase P5 protein [Acinetobacter nosocomialis Ab22222]
gi|425740059|ref|ZP_18858237.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
WC-487]
gi|260406996|gb|EEX00474.1| phenol hydroxylase component [Acinetobacter sp. RUH2624]
gi|407441259|gb|EKF47765.1| phenol hydroxylase P5 protein [Acinetobacter nosocomialis Ab22222]
gi|425495371|gb|EKU61552.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
WC-487]
Length = 353
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ D+ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPDIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHGQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ P + W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKAEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|114766548|ref|ZP_01445505.1| Na(+)-translocating NADH-quinone reductase subunit F [Pelagibaca
bermudensis HTCC2601]
gi|114541238|gb|EAU44289.1| Na(+)-translocating NADH-quinone reductase subunit F [Roseovarius
sp. HTCC2601]
Length = 407
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 241 GQMSSYIFNLKPGDKVTISGPFGEFFARDTQK------EMVFIGGGAGMAPMRSHIFDQL 294
Query: 192 SSKERSD--VRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYV 245
E D + +YGAR+ + M + + F E S + LS P+ W G TG++
Sbjct: 295 KRLENRDRKITFWYGARSKREMFFVEDFDALAAEFSNFEWHVALSDALPEDEWKGYTGFI 354
Query: 246 QAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M + V +++L GV E I+
Sbjct: 355 HNVLYEEYLKNHPNPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIM 401
>gi|189501289|ref|YP_001960759.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlorobium
phaeobacteroides BS1]
gi|189496730|gb|ACE05278.1| NADH:ubiquinone oxidoreductase, subunit F [Chlorobium
phaeobacteroides BS1]
Length = 409
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F I+ D ++ G+G++P+RS I F
Sbjct: 245 GIGSSYIFNLKPGDKVRISGPYGEFF----IKESDR--EMVYIGGGAGMAPMRSHIFHLF 298
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETGYVQ 246
+ K R V +YGAR+ K M Y ++F+ E+ + + QP +W G TG++
Sbjct: 299 KTMKTRRKVSFWYGARSKKEMFYDEEFRAIAGEFPNFSYHVALSDPQPGDDWDGPTGFIH 358
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ K P+ +CG M V ++ + GV E I
Sbjct: 359 NVLNEHYLKDHEEPEEIEYYMCGPPIMISSVDRMLYSLGVEKEMI 403
>gi|423106785|ref|ZP_17094480.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5243]
gi|423112666|ref|ZP_17100357.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5245]
gi|376388911|gb|EHT01603.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5243]
gi|376390160|gb|EHT02846.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5245]
Length = 407
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
+ + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 295 LKRLHSKRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E I+
Sbjct: 355 HNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIM 401
>gi|332304908|ref|YP_004432759.1| NADH:ubiquinone oxidoreductase subunit F [Glaciecola sp.
4H-3-7+YE-5]
gi|410642830|ref|ZP_11353339.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola chathamensis S18K6]
gi|410646103|ref|ZP_11356557.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola agarilytica NO2]
gi|332172237|gb|AEE21491.1| NADH:ubiquinone oxidoreductase, subunit F [Glaciecola sp.
4H-3-7+YE-5]
gi|410134442|dbj|GAC04956.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola agarilytica NO2]
gi|410137713|dbj|GAC11526.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola chathamensis S18K6]
Length = 408
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA + D ++ G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKEGDKATISGPFGEFFA----KKTD--AEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F KE ++ + QP+ NW G TG++
Sbjct: 296 LRRLKTDRKISFWYGARSLREMFYVEDFDMLQKENDNFNWHVALSDPQPEDNWEGLTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ GV E I+
Sbjct: 356 HQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 402
>gi|424863189|ref|ZP_18287102.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
gi|400757810|gb|EJP72021.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
Length = 408
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRS-LIESGFSSKERSD 198
LK GD V++ G FA E ++F G+G++P+RS + +
Sbjct: 252 LKPGDKVKVFGPFGEFFA-------KETSAEMVFVGGGAGMAPMRSHIFDQLLRINTDRK 304
Query: 199 VRLYYGARNLKRMAYQDKFKE----WESSGVKIVPVLSQPDGNWSGETGYVQAAF--SRA 252
+ +YGAR+LK M Y D+F E +++ + P+ +WSG+TG++ +
Sbjct: 305 ITFWYGARSLKEMFYVDEFNELADKYDNFEWHVALSDPLPEDDWSGDTGFIHNVLYENYL 364
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
KK P+ +CG M + V ++L GV E I L +F
Sbjct: 365 KKHDAPEDCEYYMCGPPMMNKAVIDMLLNLGVEPENIALDDF 406
>gi|418296008|ref|ZP_12907852.1| naphthalene 1,2-dioxygenase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539440|gb|EHH08678.1| naphthalene 1,2-dioxygenase [Agrobacterium tumefaciens CCNWGS0286]
Length = 336
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+AE+ A + + I +++ A + GQY++L D SP ++ AS
Sbjct: 110 VAEVVDATHDIKLIRIRLNERGQFA---FKPGQYVRLLYAD---------CSPRDYSIAS 157
Query: 121 GA----FEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
EF ++ V G ++ + + GD V I G F ++ P +L
Sbjct: 158 RVDEELIEFHIRHVPGGMTSGRIFSLARAGDPVTIVGPFGSSFLREKHCGP-----ILGI 212
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLS 232
A GSG++P+++++E+ ++ V +Y+GAR + + D+F + S + VPVLS
Sbjct: 213 AGGSGLAPVKAVVEAALATGRERPVHVYFGARAQRDLYMLDRFGDLASRHGNLSFVPVLS 272
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
D + GYV AA A + G + G M E +LA G+ + I
Sbjct: 273 HED-HADIRCGYVGAAV--ADDFDDLDGWKAYIAGPPAMIEATVPQLLARGMRTADI 326
>gi|374371018|ref|ZP_09629005.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus basilensis
OR16]
gi|373097437|gb|EHP38571.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Cupriavidus basilensis
OR16]
Length = 350
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCGLKKG----- 144
AGQY++ + D GK +IA+PP G E ++ + G T + + G ++G
Sbjct: 127 AGQYVEFLLRD-GKRRSYSIATPPH---QEGPIELHIRHMPGGTFTDYVFGAREGQPAMK 182
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI++++E + + LY
Sbjct: 183 ERDILRFEGPLGSFFLREDSDKP-----IILLASGTGFAPIKAIVEHAVYTGITRPMTLY 237
Query: 203 YGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + ++W E + VPV+S Q +W G TG+V A
Sbjct: 238 WGGRRPRDLYMHALCEQWARELPNFRYVPVISNAQDSDDWDGRTGFVHEA 287
>gi|183222161|ref|YP_001840157.1| putative oxidoreductase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189912219|ref|YP_001963774.1| flavodoxin reductase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776895|gb|ABZ95196.1| Flavodoxin reductase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780583|gb|ABZ98881.1| Putative oxidoreductase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 750
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST------AEVLCGLKK 143
+AGQY+ L + + +IA+ P+ G F++++V G E L G K
Sbjct: 144 KAGQYVSLSIEGMDAERNYSIANAPN---EKGIVSFIIRNVPGGKLSNYIFNENLVGKK- 199
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
++ G + D P +L+ A GSG+SPI +++E G + + + L +
Sbjct: 200 ---TKVKGAFGNFYLRDSKNP------ILMIAGGSGLSPILAILEQGILNGTKRPLTLLF 250
Query: 204 GAR---NLKRMAYQDKFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNP 258
GAR +L ++ K K+ +PVLS+ + +W GE G V + K +
Sbjct: 251 GARKKEDLYKLNELQKIKKLWKGKFNFIPVLSEEPKESSWKGERGLVTSKI----KEYIT 306
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
T LCG M + T + G+ I
Sbjct: 307 NKTEAYLCGPPPMVDSATKELTLMGIPKHSI 337
>gi|425751079|ref|ZP_18869033.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
WC-348]
gi|425484864|gb|EKU51264.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
WC-348]
Length = 353
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ P + W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKAEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + SI++
Sbjct: 302 KAYLCGPPIMIDSAISILM 320
>gi|375259139|ref|YP_005018309.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca KCTC 1686]
gi|397656111|ref|YP_006496813.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca E718]
gi|402843884|ref|ZP_10892265.1| NADH:ubiquinone oxidoreductase, F subunit [Klebsiella sp. OBRC7]
gi|423101416|ref|ZP_17089118.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5242]
gi|365908617|gb|AEX04070.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca KCTC 1686]
gi|376391204|gb|EHT03883.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5242]
gi|394344739|gb|AFN30860.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca E718]
gi|402275926|gb|EJU25059.1| NADH:ubiquinone oxidoreductase, F subunit [Klebsiella sp. OBRC7]
Length = 407
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
+ + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 295 LKRLHSKRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E I+
Sbjct: 355 HNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIM 401
>gi|160935572|ref|ZP_02082947.1| hypothetical protein CLOBOL_00462 [Clostridium bolteae ATCC
BAA-613]
gi|158441316|gb|EDP19026.1| hypothetical protein CLOBOL_00462 [Clostridium bolteae ATCC
BAA-613]
Length = 263
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLCGL 141
DI SH GQ+LQL + VG+ +P S +S G +F ++SV T E+
Sbjct: 30 DIRPSH---GQFLQLSIPKVGE-------APISVSSFGDGWMDFTIRSVGKVTDEIF-EK 78
Query: 142 KKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVR 200
+ GD++ + G+G+ V++ Q +++ G+G++P++S++ + ++ V
Sbjct: 79 QPGDILFLRGAYGKGWPVEQFQGKH----MVVITGGTGLAPVKSMLNMFWEQEDFVKSVH 134
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
L G +N + ++ W+ I + + W ETG+V SR +
Sbjct: 135 LISGFKNEDGIIFKHDLDRWKEKFTTIYALDTDRKDGW--ETGFVTEFVSRIPFKDFGED 192
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VV+ G M + VL +GV EKI +F
Sbjct: 193 YSVVVVGPPPMMKFTGLEVLKQGVPEEKIWMSF 225
>gi|124026214|ref|YP_001015330.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str.
NATL1A]
gi|123961282|gb|ABM76065.1| ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str.
NATL1A]
Length = 387
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+++ G + LC L GD V+IS +G+ + + P +E +++ ATG+GI+P+R+ +
Sbjct: 196 ETINGVCSTYLCNLSPGDKVKISGPVGK----EMLLPEEEDSNIIMLATGTGIAPMRAYL 251
Query: 188 ESGFSSKE--------RSDVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDG 236
F E + L+ GA + Y F+ ++S ++ +S+
Sbjct: 252 RRMFEPTEIEKHQWNFKGKAWLFMGAPKTANLLYDADFEHYKSKFPENLRYTKAISREQN 311
Query: 237 NWSGETGYVQ-AAFSRAKKIF----NPQGTGVVLCGQKQMA----EEVTSIVLAEGVS 285
N G Y+Q A++IF NP+ T + LCG K M E +T+ A+G+
Sbjct: 312 NTKGGRMYIQDRVLEHAEEIFDMIENPK-THIYLCGLKGMEPGIDEAMTTAASAKGLD 368
>gi|13096165|pdb|1GAQ|A Chain A, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
gi|13096167|pdb|1GAQ|C Chain C, Crystal Structure Of The Complex Between Ferredoxin And
Ferredoxin-Nadp+ Reductase
gi|13096168|pdb|1GAW|A Chain A, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
gi|13096169|pdb|1GAW|B Chain B, Crystal Structure Analysis Of The Ferredoxin-Nadp+
Reductase From Maize Leaf
Length = 314
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC L+ GD V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 128 VKGVCSNFLCDLQPGDNVQITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 183
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
F K D + L+ G + Y+++F KE ++ +S+ N +G
Sbjct: 184 MFFEK-HDDYKFNGLGWLFLGVPTSSSLLYKEEFGKMKERAPENFRVDYAVSREQTNAAG 242
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
E Y+Q + K ++ T V +CG K M + + I+++
Sbjct: 243 ERMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIMVS 287
>gi|350552275|ref|ZP_08921479.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Thiorhodospira
sibirica ATCC 700588]
gi|349794652|gb|EGZ48463.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Thiorhodospira
sibirica ATCC 700588]
Length = 277
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 19/225 (8%)
Query: 70 SLFHVSIDISDAPDIASSH-TRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
S+F + ++ +D PDI + + GQY L + VG+ ++ P G E ++
Sbjct: 21 SIFTLHLEFTD-PDIDLEYRCQPGQYNMLYLYGVGEVPISIVSDP----EHRGPLEHTIR 75
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
SV G L L+ G+ + + GRG+ + + D V+I G G +P+ S+I
Sbjct: 76 SV-GRVTRGLDRLRVGERIGLRGPYGRGWPIREAEGRD----VVIVTGGLGCAPVVSMIR 130
Query: 189 SGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWE---SSGVKIVPVLSQPDGNWSGETGY 244
+ER + + G ++ + ++ ++++W+ ++ V + +S P NW G
Sbjct: 131 YVLRRRERFGRLVIMQGVKHTDELIWRKQYEQWQRLPNTQVLLSSDISGP--NWPFSVGK 188
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
V F++A+ N + + V+LCG + M + +LA + E I
Sbjct: 189 VTVLFNQAR--LNTRKSIVMLCGPEMMMKASIERLLALDMPPEAI 231
>gi|119944538|ref|YP_942218.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Psychromonas ingrahamii
37]
gi|119863142|gb|ABM02619.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Psychromonas ingrahamii 37]
Length = 321
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVA-GSTAE-VLCGLKKGDVVEI 149
GQY+ L + + +A A S E ++ VA G +E V GLK+G ++ +
Sbjct: 126 GQYVDLNFKGIKRSYSIANAK-----QVSDGIELHIRKVAEGKMSEAVFSGLKEGLLMRL 180
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
G F + +P ++ A G+GI+P++++IE +++ + ++ +Y+G N
Sbjct: 181 EGPKGTFFVRESNKP------IIFLAGGTGIAPVKAMIEDLVANESKREIHIYWGMNNPS 234
Query: 210 RMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
Y DK +++ E+S + PVLS + W G G+V A + N V CG
Sbjct: 235 AF-YLDKLQQFAEENSNIYYTPVLSGEE-QWDGRMGFVHQAVCDDFESLNE--YQVYACG 290
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M + + +S E+ +
Sbjct: 291 SPLMINAAKISFIEKQLSKEQFFSD 315
>gi|392968940|ref|ZP_10334356.1| oxidoreductase FAD/NAD(P)-binding domain protein [Fibrisoma limi
BUZ 3]
gi|387843302|emb|CCH56410.1| oxidoreductase FAD/NAD(P)-binding domain protein [Fibrisoma limi
BUZ 3]
Length = 371
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 127 VKSVAGSTA-EVLCG-LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
VK V G A LC +K GD++E + MG R++ ++ +LI A GSGI+P+
Sbjct: 82 VKRVPGGLASNYLCDRIKPGDIIETLEPMGT--FTPRLEAQNQRLIILIGA-GSGITPLF 138
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVK----IVPVLSQPDGNWSG 240
S+ +S + S V L YG RN + + Y+ E + K + VLSQP W+G
Sbjct: 139 SMAKSILHVEPASRVWLIYGNRNKESIIYRAHLDAMEQAHGKNRFRVTHVLSQPGFGWNG 198
Query: 241 ETGYV-QAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
G + Q + ++ + Q LCG M E S + GV +E++ K
Sbjct: 199 LEGRLNQHSLTKLLSELDTYQLQNATFYLCGPDGMMAEARSALSLLGVPNERVFK 253
>gi|299770898|ref|YP_003732924.1| phenol hydroxylase, Ferredoxin subunit [Acinetobacter oleivorans
DR1]
gi|298700986|gb|ADI91551.1| Phenol hydroxylase, Ferredoxin subunit [Acinetobacter oleivorans
DR1]
Length = 353
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ D+ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPDIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ P + W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKAEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|217076790|ref|YP_002334506.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Thermosipho africanus TCF52B]
gi|217036643|gb|ACJ75165.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Thermosipho africanus TCF52B]
Length = 367
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 38/283 (13%)
Query: 28 RIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL---AEISPAAESLFHVSIDISDA--- 81
+P + + + + V++D + P L +++ S+ +V+ DI +
Sbjct: 92 ELPYMSEEETKENIRLSCQIKVKKDIKIQLPEELFNVKKLTGKVVSIKNVTHDIKEVRIK 151
Query: 82 -PDIASSHTRAGQYLQLRV---VDVGKPTFLA--IASPPSFASASGAFEFLVKSVAG--S 133
P+ + +AGQY+Q+ V + +PT A IAS PS + L++ V G +
Sbjct: 152 LPE--EINFKAGQYVQIVVPPYDKIKQPTQRAYSIASTPS---KKDEIDLLIRLVPGGIA 206
Query: 134 TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ES 189
T V LK+GD +E+ G + D ++ A GSG++PI+S++ E
Sbjct: 207 TTYVHNYLKEGDNLEVIGPFGEFYM------RDTDADMICVAGGSGMAPIKSIVLDMYER 260
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQP--DGNWSGETGYV 245
G +++ +V ++GAR K + Y + FK+ E S +P LS+P W+GE G +
Sbjct: 261 GITNR---NVWYFFGARTEKDLFYVELFKDLEKKWSNFHFIPALSEPIEPEKWNGEVGLI 317
Query: 246 QAAFSRAKKIFNPQGTGV--VLCGQKQMAEEVTSIVLAEGVSS 286
+ + + T LCG M ++ G+
Sbjct: 318 TDVMVKYLENVVDKNTKKEGYLCGSPGMINACEKLLNEHGIKD 360
>gi|398802470|ref|ZP_10561679.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Polaromonas sp.
CF318]
gi|398099636|gb|EJL89889.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Polaromonas sp.
CF318]
Length = 350
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVL 138
A D+ H AGQY++ + D G ++ + P + + E ++ + G T V
Sbjct: 126 ASDVFKYH--AGQYVEFLLRD-GDRRAYSMGNAPHTQAENPGVELHIRHMPGGKFTEHVF 182
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERS 197
+K+ +++ I G + ++ + P VL+ A+G+G +PI++LIE F R
Sbjct: 183 GPMKEKEILRIEGPFGSFY----LREDSDKPMVLL-ASGTGFAPIKALIEHLQFKGITRP 237
Query: 198 DVRLYYGARNLKRMAYQD---KFKEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRA 252
V LY+G R + Y D K K E ++ VPV+S P+ NW+G TG+V A
Sbjct: 238 AV-LYWGGRRPADL-YMDEWVKTKTAEMPNLRYVPVISNALPEDNWTGRTGFVHQAV--L 293
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ + G V CG + + + A G+ ++ +
Sbjct: 294 EDFADLSGHQVYACGAPIVVDSAQAAYTAAGLPEDEFYAD 333
>gi|420250486|ref|ZP_14753699.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
gi|398060791|gb|EJL52605.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Burkholderia
sp. BT03]
Length = 399
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + + D + ++ +IA PP S + E ++ G T +V L ++
Sbjct: 189 RAGQYIDILLPDGVRRSY-SIAVPPDPVSLT-HIELHIRHHPGGRFTEQVFSELATRQML 246
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F + P V++ A G+G +PI++++E + +Y+G R
Sbjct: 247 RFEGPYGAFFLREATGKP-----VILLAGGTGFAPIKAIVEYALQRGSAREFHIYWGGRR 301
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + D +W + V VPVLS+P D +W G TG+V A + G V
Sbjct: 302 RRDLYLADLPYKWAEDHPNVHFVPVLSEPGMDCDWIGRTGWVHQAV--VDDFPDLSGYEV 359
Query: 264 VLCGQKQM 271
CG M
Sbjct: 360 YACGAPAM 367
>gi|392396240|ref|YP_006432841.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Flexibacter litoralis DSM 6794]
gi|390527318|gb|AFM03048.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Flexibacter litoralis DSM 6794]
Length = 425
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + KKGD V IS G F D + ++ G+G++P+RS I F
Sbjct: 260 GKCSSYVFNCKKGDKVNISGPYGEFFIKDTDK------EMIYIGGGAGMAPLRSHIFHLF 313
Query: 192 -SSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
++K V +YG R+ + + Y D+F KE+ + IV P+ NW G G+V
Sbjct: 314 HTAKSDRKVSFWYGGRSKRELFYVDEFRAIEKEFPNFTFNIVLSEPLPEDNWDGYVGFVH 373
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K +P+ CG M V ++ GV E I+
Sbjct: 374 QSLIDNYLSKHDDPEEIEFYFCGPPMMNAAVIKMLDDYGVPEEHIM 419
>gi|117618547|ref|YP_855682.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117559954|gb|ABK36902.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 407
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ + LS QP+ NW G TG++
Sbjct: 296 RRLKTKRKMSFWYGARSKREMFYVEDFDMLQAENDNFQWHVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLFENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKNLGVEDENIL 401
>gi|383933778|ref|ZP_09987222.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Rheinheimera nanhaiensis E407-8]
gi|383705384|dbj|GAB57313.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Rheinheimera nanhaiensis E407-8]
Length = 410
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 244 CGKMSSFIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 297
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F E+ + LS QP+ NW+G TG++
Sbjct: 298 LRRLKSKRKITFWYGARSKREMFYVEDFDMLAAENDNFEWHVALSDPQPEDNWTGYTGFI 357
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++ GV + IL
Sbjct: 358 HNVIYENYLKNHKAPEDCEFYMCGPPMMNKAVINMLKDLGVEDDNIL 404
>gi|261364028|ref|ZP_05976911.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria mucosa ATCC 25996]
gi|288568058|gb|EFC89618.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Neisseria mucosa ATCC 25996]
Length = 335
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKS-VAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G E ++ G +E++ G +K+
Sbjct: 131 AGQYIDLLLPGNISRSY-SIANSPD---QEGILELHIRRRENGVCSEMIFGSEPKVKEKG 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V I +G F + D +++ ATG+G +PIRS++ V Y+GA
Sbjct: 187 IVRIKGPLG-SFTLQE----DSSKPIILLATGTGYAPIRSILLDLIRQDSSRAVHFYWGA 241
Query: 206 RNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R+ + ++ +E + PVLS+ +W GE GYVQ A AK + G V
Sbjct: 242 RHQDDLYALEEAQELTGRLKNARFTPVLSKATESWQGEKGYVQTA--TAKDYPDLSGYEV 299
Query: 264 VLCGQKQMAEEVTSIVLAE 282
CG M E S + A+
Sbjct: 300 YACGSVAMTESAKSALTAQ 318
>gi|51244613|ref|YP_064497.1| xylene monooxygenase electron transfer component [Desulfotalea
psychrophila LSv54]
gi|50875650|emb|CAG35490.1| related to xylene monooxygenase electron transfer component
[Desulfotalea psychrophila LSv54]
Length = 225
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASA---SGAFEFLVKSVAGSTAEVLCGLKKGDVV 147
AGQY+ +VD+G +A P S +S G EF + + L L++G+ +
Sbjct: 32 AGQYM---LVDLGD----ELARPLSLSSCPQEGGFIEFTKRMIGSPYCMRLESLQRGEAI 84
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ G F PD +++ A G GI+PIRS++ S +ER + L YG +N
Sbjct: 85 RVAGPFGE-FCC-----PDSGEPLVLIAGGIGITPIRSILTS--LKEERGETTLIYGNQN 136
Query: 208 LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT--GVVL 265
+ +A++D+ + + +V VLS G + G++ A A+++ P+G+ ++
Sbjct: 137 REDIAFRDELEHLSLAHYHLVHVLSDATGMENAYQGFINADI-LAREV--PKGSIGQYMV 193
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G M E + + GV+ E+I
Sbjct: 194 SGPPLMVEAIKKGLAGIGVAEERI 217
>gi|348175062|ref|ZP_08881956.1| flavohemoprotein [Saccharopolyspora spinosa NRRL 18395]
Length = 370
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 28/200 (14%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS-TAEVLCGLKK-GDVVEI 149
GQY+ + V +P SP + S G EF ++SV G + + G + GD I
Sbjct: 171 GQYVSVEVPQ--RPRLWRYLSPANAPSDDGILEFHIRSVEGGWVSRAMVGHARPGDQWRI 228
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR--- 206
MGR VDR PD VL+ A G+G++P+R++I+ E V+L+YG R
Sbjct: 229 GSPMGR-LTVDRETSPD----VLMIAGGTGLTPMRAIIDDLAQYGENPRVQLFYGGRTRE 283
Query: 207 ------NLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
NL+R+A + + + I PV+ G E + A +R Q
Sbjct: 284 DLYDLENLQRVAMHNPW-------LTITPVVEDDPGVSGAEHSTLAEAVTRYGAW---QD 333
Query: 261 TGVVLCGQKQMAEEVTSIVL 280
V++ G M S +L
Sbjct: 334 WDVLVSGSPGMIRATVSQML 353
>gi|91774387|ref|YP_544143.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Methylobacillus
flagellatus KT]
gi|91708374|gb|ABE48302.1| oxidoreductase FAD/NAD(P)-binding protein [Methylobacillus
flagellatus KT]
Length = 342
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 21/234 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTR----AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFE 124
E L +S D+ SH R AGQY++ + D G+ ++AS P E
Sbjct: 107 EKLEKLSHDVMGMTLKLPSHERMQFMAGQYIEFLLND-GRRRAFSLASAPH---QDRFLE 162
Query: 125 FLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
++ V G T V +++ ++ I G F + D V++ A G+G +P
Sbjct: 163 LHMRLVPGGQFTQYVFNEMQEKTILRIEGPFGTFFLRE-----DSLRPVILVAGGTGFAP 217
Query: 183 IRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNW 238
++ ++E + + LY+GAR + + W E + +PVLS P+ W
Sbjct: 218 VKGIVEHALQQGMKRPMTLYWGARTRADLYLDALPRRWQEEHPWFRYIPVLSDPVPEDAW 277
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G TG V A + Q V CG QM E A G+ ++ +
Sbjct: 278 QGRTGLVHQAVLEDHP--DMQAYQVYCCGAPQMVEVAHRDFQAHGLPEQEFFSD 329
>gi|407803068|ref|ZP_11149906.1| Oxidoreductase FAD-binding domain-containing protein [Alcanivorax
sp. W11-5]
gi|407022923|gb|EKE34672.1| Oxidoreductase FAD-binding domain-containing protein [Alcanivorax
sp. W11-5]
Length = 367
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 20/230 (8%)
Query: 67 AAESLFHVSIDISDAP-DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEF 125
A E ++ I+ AP D AGQYL L + DV S + AF
Sbjct: 39 AVERQTEDAVSITLAPMDDKPCDAAAGQYLTL-IADVNGARIKRAYSLSQLPDQN-AFTV 96
Query: 126 LVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISP 182
K++AG + + LK GD+++ + G PD P F A GSGI+P
Sbjct: 97 TCKAIAGGRMSGHLNSALKAGDLLQFAGPSGEFLL------PDSVPAHYAFVAAGSGITP 150
Query: 183 IRSLIESGFS-SKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWS 239
I +++E + R+ + L +G R K + ++D+ ++ S + + + L++P W
Sbjct: 151 IMAMLEQLLEIDRCRTPITLLFGNRREKDILFRDRLEQLVSAHANLSVSYYLTRPGKRWK 210
Query: 240 GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
G+ G + A+ + GT LCG + +L G+SS I
Sbjct: 211 GQQGRIS-----AEALPQQPGTHYFLCGPDTFNSSLREALLNLGISSTAI 255
>gi|253995535|ref|YP_003047599.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Methylotenera mobilis
JLW8]
gi|253982214|gb|ACT47072.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylotenera
mobilis JLW8]
Length = 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D GK ++A+ P A E ++ + G T V + ++
Sbjct: 133 AGQYVEFLLKD-GKRRAFSLANAPH---ADNLLELHLRLIPGGQFTEYVFNEMPDKAILR 188
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G + + E P V++ A G+G +PI+++IE + + V LY+GAR L
Sbjct: 189 IEAPFGSFY----YRSDSEKPMVMV-AGGTGFAPIKAIIEHMIHNDIKRKVTLYWGARAL 243
Query: 209 KRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + + W + ++ +PVLS P NW G +G V A + G V
Sbjct: 244 EDLYMPALAQAWAETHPNIEFIPVLSDALPQDNWQGRSGLVHQAV--LDDFSDLSGVEVY 301
Query: 265 LCGQKQMAE 273
CG M E
Sbjct: 302 CCGAPAMVE 310
>gi|411010372|ref|ZP_11386701.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
aquariorum AAK1]
gi|423197763|ref|ZP_17184346.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
hydrophila SSU]
gi|404631451|gb|EKB28087.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
hydrophila SSU]
Length = 407
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ + LS QP+ NW G TG++
Sbjct: 296 RRLKTKRKMSFWYGARSKREMFYVEDFDMLQAENDNFQWHVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLFENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKNLGVEDENIL 401
>gi|88857612|ref|ZP_01132255.1| Ferredoxin--NADP reductase [Pseudoalteromonas tunicata D2]
gi|88820809|gb|EAR30621.1| Ferredoxin--NADP reductase [Pseudoalteromonas tunicata D2]
Length = 250
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLA--IASP 113
W + EI + LF + + P +AGQ+ +L +V+ G A +P
Sbjct: 8 WKTATVKEIVWWNKRLFSLIVQAQIEP------FKAGQFTKLALVNEGNRIARAYSFVNP 61
Query: 114 PSFASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
PS A EF + +V G + L LK GD ++I+ F +D + ++ +
Sbjct: 62 PSHAD----LEFYLINVEDGLLSPPLGQLKAGDQLQIASQASGFFTLDEVPAAEQ---LW 114
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPV 230
+ ATG+ I P S++++ + + L +G R + ++Y+D + S +K V +
Sbjct: 115 LLATGTAIGPFLSILQNEEVWDKFKTIHLVHGVRKKEDLSYRDLINQLMERHSQLKYVSL 174
Query: 231 LSQPDGNWSGETGYVQAAFSRA--KKIF----NPQGTGVVLCGQKQMAEEVTSIVLAEG 283
LSQ + N G G + A + ++ F P + ++CG M +E I+L +G
Sbjct: 175 LSQ-EKNLDGLNGRITTALEQKSLEQYFAVQATPNNSQFMICGNPAMVKESCQILLNQG 232
>gi|365897241|ref|ZP_09435258.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Bradyrhizobium
sp. STM 3843]
gi|365422067|emb|CCE07800.1| Oxidoreductase FAD/NAD(P)-binding domain protein [Bradyrhizobium
sp. STM 3843]
Length = 282
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 59 TPLAEISPAAESLF---HVSIDISDA------PDIASSHTRA-GQYLQLRVVDVGKPTFL 108
T A+I P L+ HV ++SD P S + A GQ+ L +G+ +
Sbjct: 5 TAAAQIDPFVPQLYKVAHVRRELSDVVTLEIKPSQGSRPSYAPGQFNMLYAFGIGE---I 61
Query: 109 AIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEY 168
AI+ ++G F V+ V G+ + + L G + + G + V + D
Sbjct: 62 AISISGDGTDSTG-FVHTVRDV-GAVSRAIAALDIGATLGVRGPFGTEWPVTAAEGSD-- 117
Query: 169 PTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESS-GVK 226
+LI A G G++P+R I +++ R V + +G R+ + + + D+ W +
Sbjct: 118 --ILIIAGGLGLAPLRPAITHVLANRARYGRVAILFGCRHPEDILFHDQLAAWRGRLDIA 175
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSS 286
+ + D NW G G V A R F+P T ++CG + M + + GV+S
Sbjct: 176 VEVTVDHADSNWHGHVGVVPALIPRVS--FSPHDTVALVCGPEIMMRFTANALRDAGVAS 233
Query: 287 EKI 289
+I
Sbjct: 234 NQI 236
>gi|339481650|ref|YP_004693436.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Nitrosomonas sp. Is79A3]
gi|338803795|gb|AEJ00037.1| oxidoreductase FAD/NAD(P)-binding domain protein [Nitrosomonas sp.
Is79A3]
Length = 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGD 145
AGQY+ + + D + +F S A+A EFL ++ G T V ++ D
Sbjct: 134 AGQYIDILLKDGKRRSF-------SLANAPHDDEFLQLHARNYPGGAFTEHVFTHMRVKD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK----ERSDVRL 201
++ + +G F D P D +++ A+G+G +PI+S++E F + ++ + L
Sbjct: 187 ILRFTGPLGSFFLRD--APEDT--SIIFLASGTGFAPIKSILEHIFHQENGRYKKMRMTL 242
Query: 202 YYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAA 248
Y+GAR + D +W+ VPVLS+ P NW G G V A
Sbjct: 243 YWGARKRADLYLADLADKWQQQHKNFTFVPVLSEPLPTDNWEGRIGLVHEA 293
>gi|237653771|ref|YP_002890085.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thauera sp. MZ1T]
gi|237625018|gb|ACR01708.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thauera sp. MZ1T]
Length = 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 15/199 (7%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGD 145
H +AGQY+ + ++A+PPS E ++ V G T V L+ G+
Sbjct: 131 HFQAGQYINFFLEGGEYSRAFSLANPPS---TGREVELNIRIVPGGRGTTWVHEQLQVGE 187
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
V +S GR F R P+ +L A GSG+S RS+I + + + L YG
Sbjct: 188 RVRLSGPYGRFFV--RKSAPE---ALLFMAGGSGLSSPRSMILDLLEAGDTRQMTLVYGQ 242
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGT 261
RN + Y D+F + S VP LS D W G GYV A + A + +G
Sbjct: 243 RNRAELYYHDEFLALAAKHSNFTYVPALSDEPADSGWEGFRGYVHEA-ATAHFDNDFRGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + + ++
Sbjct: 302 KAYLCGPPLMIDACITALM 320
>gi|310779996|ref|YP_003968328.1| sulfite reductase subunit B [Ilyobacter polytropus DSM 2926]
gi|309749319|gb|ADO83980.1| sulfite reductase, subunit B [Ilyobacter polytropus DSM 2926]
Length = 280
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 29/231 (12%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF V D GQ++++ + VG+ A S F G EFL++
Sbjct: 35 EWLFRVEYD---------QEVTFGQFIEISIPRVGE----APLSVTQFNKEEGWIEFLIR 81
Query: 129 SVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEY--PTVLIFATGSGISPIRSL 186
V G + L LK GD++ + G GF + +EY ++I A GSG++P+RS+
Sbjct: 82 KV-GKVTDCLFDLKAGDLMFLRGPYGNGFPAE-----EEYRGKHLIIVAGGSGLAPVRSM 135
Query: 187 IESGFSSKERSD--VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQP--DGNWSGET 242
I + F + E +D V L G ++ + ++D+ K+W+ ++ V + DG G
Sbjct: 136 I-NHFYNDEANDTKVDLLLGFKDYDSIIFKDEIKQWKEKFNTLITVDNSCSIDGVCEGLV 194
Query: 243 GYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
A I + + VV+ G M + L+ GV EKI +F
Sbjct: 195 TKYIPDLELADDIADME---VVIVGPPVMMKYSALEFLSRGVPKEKIWVSF 242
>gi|414878633|tpg|DAA55764.1| TPA: hypothetical protein ZEAMMB73_743777 [Zea mays]
Length = 367
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 182 VKGVCSNFLCDLKPGAEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 237
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 238 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 296
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I+L
Sbjct: 297 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIML 340
>gi|423127540|ref|ZP_17115219.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5250]
gi|376394579|gb|EHT07229.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5250]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA + ++ G+G++P+RS I F
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA------KETQAEMVFIGGGAGMAPMRSHI---F 292
Query: 192 SSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETG 243
+R + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG
Sbjct: 293 DQLKRLHSTRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGHTG 352
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + + P+ +CG M V ++ GV E I+
Sbjct: 353 FIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIM 401
>gi|423203034|ref|ZP_17189612.1| hypothetical protein HMPREF1167_03195 [Aeromonas veronii AER39]
gi|423204722|ref|ZP_17191278.1| hypothetical protein HMPREF1168_00913 [Aeromonas veronii AMC34]
gi|404613677|gb|EKB10696.1| hypothetical protein HMPREF1167_03195 [Aeromonas veronii AER39]
gi|404625819|gb|EKB22632.1| hypothetical protein HMPREF1168_00913 [Aeromonas veronii AMC34]
Length = 232
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 20/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ E+ ++++HV++ P A S + GQYL + + D K F +IA+ P+
Sbjct: 8 VEELREYVDTIWHVAL----TPQQAISF-KPGQYLLVVMSDSDKRPF-SIANSPT---RP 58
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G E + + +VL +++ +E+ G+ F D P +++ A G+
Sbjct: 59 GVLELQIGATPENAYAGQVLARMREQGEIEVELPAGKAFLRDESPRP-----LILMAGGT 113
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDG 236
G S RS++E + + V Y+G R + ++ ++WE + + +PV+ +P+
Sbjct: 114 GFSYARSILEYLIDTGSKRPVFFYWGVRQAHWLYELEQMQQWERDYAPLTFIPVVQEPEA 173
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+W+G++G V A + + + G+ +MA G E+I +
Sbjct: 174 DWTGKSGLVHKAI--MDDFVSLHDYDIYVAGRFEMAGAAREEFKILGAEPERIFGD 227
>gi|169830760|ref|YP_001716742.1| oxidoreductase FAD/NAD(P)-binding subunit [Candidatus Desulforudis
audaxviator MP104C]
gi|169637604|gb|ACA59110.1| oxidoreductase FAD/NAD(P)-binding domain protein [Candidatus
Desulforudis audaxviator MP104C]
Length = 281
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +I P + I + + A GQ L V VG+ F +I+S P+
Sbjct: 15 IQDIIPETSDVKTFRITLDNPRAAAGWRHEPGQLAMLSVFGVGEAMF-SISSTPT---RR 70
Query: 121 GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGI 180
EF +K + G L ++ G + + G F ++ Q D +L G G+
Sbjct: 71 DFLEFSIKRM-GRLTRALHEMEAGGRIGVRGPYGNHFPYEKFQGKD----LLFVGGGIGM 125
Query: 181 SPIRSLIESGFSSKER---SDVRLYYGARNLKRMAYQDKFKE-WESSGVKIV-PVLSQPD 235
+P+RSLI+ ++ R V + YGAR+ + ++ + + W +V + + +
Sbjct: 126 APLRSLIDFVLEAENRHRYGRVEILYGARSYDDLCFKSRLLDGWHKEPNTVVYSTIDRAE 185
Query: 236 GNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
W+G G+V A + +P+ VLCG M V ++ G + ++I
Sbjct: 186 ARWTGHVGFVPAYLEKVAP--SPENKCAVLCGPPVMIRFVLEVLKKLGFADDQI 237
>gi|126740219|ref|ZP_01755908.1| Na(+)-translocating NADH-quinone reductase subunit F [Roseobacter
sp. SK209-2-6]
gi|126718674|gb|EBA15387.1| Na(+)-translocating NADH-quinone reductase subunit F [Roseobacter
sp. SK209-2-6]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 AGQMSSYIFNLKPGDKVTISGPFGEFFARDTQK------EMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
+ D + +YGAR+ K M + + F +E+++ + + P+ +W G TG+
Sbjct: 294 LKRLQNRDRKISFWYGARSKKEMFFVEDFDQLAEEFDNFEWHVALSDAMPEDDWKGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V +++L GV E I+
Sbjct: 354 IHNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIM 401
>gi|42523877|ref|NP_969257.1| phenol 2-monooxygenase [Bdellovibrio bacteriovorus HD100]
gi|39576084|emb|CAE80250.1| phenol 2-monooxygenase [Bdellovibrio bacteriovorus HD100]
Length = 240
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 25/240 (10%)
Query: 67 AAESLFHVSID--ISDAPDIAS----SHT------RAGQYLQLRV-VDVGKPTFLAIASP 113
AA +++H+ ++ I P + + T +AGQ++ L V KP A +
Sbjct: 3 AARTIYHMRVEEIIDHTPTVRELVLKTETPNEFGFKAGQFVMLHVPQGEAKPALRAYSIA 62
Query: 114 PSFASASGAFEFLVKSVAGSTAEVLCG-LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +G F L K V A LK G+++ + G+ F +PP E ++
Sbjct: 63 SDDRTKNG-FRLLFKFVENGLASTFVWQLKGGELLNFTGPFGKVFFQ---EPPTE--QIV 116
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPV 230
TG+G+S + S R+ +G R K M YQ + +E + + K V
Sbjct: 117 FLNTGTGLSQHLCYLLSKKDQYPNLRYRMLFGVRTEKDMYYQKEIEELQKALPDFKFEFV 176
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL-AEGVSSEKI 289
LS+P +W G+ GYVQ S P T LCG M ++V +L +G +I
Sbjct: 177 LSRPQDDWKGKKGYVQNFISEFDYKNIP--TTFYLCGNGGMIKDVKHQLLEVDGFDKTRI 234
>gi|359441805|ref|ZP_09231691.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20429]
gi|358036307|dbj|GAA67940.1| ferredoxin--NADP+ reductase [Pseudoalteromonas sp. BSi20429]
Length = 247
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 26/245 (10%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + ++ +E+LF ++++ + P +AGQ+ +L ++D K IA S
Sbjct: 4 WVEATVKSVTWWSETLFSLTVNANVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A + EF L+ + G + L L+ G+ V I Q F +D I D+ +
Sbjct: 54 YVNAPENPDLEFYLINVIDGLLSPRLATLQPGETVLIEQHATGFFTLDEIPQSDQ---LW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW---ESSGVKIVP 229
+ TG+ I P S+++ K+ + L +G R ++YQ E + +P
Sbjct: 111 MLGTGTAIGPFLSILQQPDVWKKYKTINLVHGVRFNNDLSYQALINELLRVYPEQLNYIP 170
Query: 230 VLSQPDGNWSGETGYVQAA------FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
V+S+ + G +G + A F K P ++CG QM ++ T+++L +
Sbjct: 171 VVSREEP-LQGLSGRITNAIESNRLFEHVKLNPEPSNAQFMICGNPQMVKDTTALLLDKN 229
Query: 284 VSSEK 288
+ +
Sbjct: 230 FTRNR 234
>gi|346993346|ref|ZP_08861418.1| Na(+)-translocating NADH-quinone reductase subunit F [Ruegeria sp.
TW15]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA + E V I G+G++P+RS I
Sbjct: 241 GQMSSYIFNLKPGDKVTISGPFGEFFARET-----EKEMVFI-GGGAGMAPMRSHIFDQL 294
Query: 192 SSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
E + + +YGAR+ K M + + F KE+++ + +QP+ +W G TG++
Sbjct: 295 KRLENRNRKISFWYGARSKKEMFFVEDFDTLAKEFDNFEWHVALSDAQPEDDWKGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 355 HNVLFEEYLKNHPAPEDCEYYMCGPPIMNQSVINMLLDLGVDREDIM 401
>gi|220934310|ref|YP_002513209.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995620|gb|ACL72222.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 284
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVV 147
R GQ+ L + VG+ +A S G+ +++V GS + GL+ GDVV
Sbjct: 47 EVRPGQFNMLYLFGVGE-----VAISVSATGDDGSLVHTIRAV-GSVTRTMQGLRAGDVV 100
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGAR 206
+ G + V+ + D +++ A G G++P+R +I + + +E V + YGAR
Sbjct: 101 GVRGPFGSAWPVEAAEGRD----LVLAAGGIGLAPLRPVIHAVLARREAFGRVLICYGAR 156
Query: 207 NLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + ++D+ +W++ + + + + + +W G+ G V R F+ + ++
Sbjct: 157 SPRDLIFRDELAQWQARADLDVRVTVDRGTADWKGDVGVVTQLIDRGG--FDGRNALAMV 214
Query: 266 CGQKQMAEEVTSIVLAEGVSSEK 288
CG + M + GV+ E+
Sbjct: 215 CGPEVMMRFSALSLHRRGVAPER 237
>gi|193212601|ref|YP_001998554.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193086078|gb|ACF11354.1| oxidoreductase FAD/NAD(P)-binding domain protein [Chlorobaculum
parvum NCIB 8327]
Length = 278
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 21/244 (8%)
Query: 55 VWTPTPLAEIS-----PAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLA 109
++TP P+ +S P +L ++ D + ++ G + + G+ TF
Sbjct: 2 IYTPFPMRVVSKRVEAPGVNTLKLEFVNQEDH-EFFKANYHTGMFGLYGIYGEGESTF-C 59
Query: 110 IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
+ASP + E + +G L +GD+V G F +++ E
Sbjct: 60 VASP---ETRKDYIECTFRQ-SGRVTTTLANTDEGDIVTFRGPYGNRFPIEQF----EGK 111
Query: 170 TVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIV 228
+L A G + P RS+I S +E+ DV + YGAR + + Y+ + +EW+ +
Sbjct: 112 NLLFIAGGIALPPTRSVIWSCLDQREKYKDVTIVYGARTVADLVYKHELEEWKQRDDVNL 171
Query: 229 PVLSQPDG---NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVS 285
+ P G +W G+V +A +P+ T VLCG M + + + G +
Sbjct: 172 VLTVDPGGETPDWHDHVGFVPTVLEQAAP--SPENTIAVLCGPPIMIKFTLAALEKLGFT 229
Query: 286 SEKI 289
+E +
Sbjct: 230 AENV 233
>gi|56708823|ref|YP_164864.1| Na(+)-translocating NADH-quinone reductase subunit F [Ruegeria
pomeroyi DSS-3]
gi|56680508|gb|AAV97173.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Ruegeria pomeroyi DSS-3]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 AGKMSSYIFNLKPGDEVTISGPFGEFFARDTDK------EMVFIGGGAGMAPMRSHIFDQ 293
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK---------EWESSGVKIVPVLSQPDGNWSG 240
K + + +YGAR+ K M + + F EW + +QP+ +W G
Sbjct: 294 LKRLKSKRKISFWYGARSKKEMFFVEDFDMLAAENPNFEWH-----VALSDAQPEDDWKG 348
Query: 241 ETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
TG++ K P+ +CG M + V +++L GV E I+
Sbjct: 349 YTGFIHNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIM 400
>gi|221134692|ref|ZP_03560995.1| Na(+)-translocating NADH-quinone reductase subunit F [Glaciecola
sp. HTCC2999]
Length = 410
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 244 AGKMSSFIWSLKAGDKVTISGPFGEFFAKDTDA------EMVFVGGGAGMAPMRSHIFDQ 297
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+ + M Y + F E+ LS QP+ NW G+TG++
Sbjct: 298 LRRIKTDRKMSFWYGARSKREMFYVEDFDMLAAENDNFDWHVALSDPQPEDNWEGDTGFI 357
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E I+
Sbjct: 358 HNVLLENYLKDHPAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIM 404
>gi|408672806|ref|YP_006872554.1| oxidoreductase FAD/NAD(P)-binding domain protein [Emticicia
oligotrophica DSM 17448]
gi|387854430|gb|AFK02527.1| oxidoreductase FAD/NAD(P)-binding domain protein [Emticicia
oligotrophica DSM 17448]
Length = 355
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 127 VKSVAGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
VK VAG +K GD +EI + MG F V+ D +++F GSGI+P+
Sbjct: 74 VKRVAGGLVSNYLNDKVKVGDFLEIIEPMGN-FVVET--DADNARHLVMFGAGSGITPLL 130
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS-GVKIV--PVLSQPDGNWSGE 241
S+ +S + S V L YG R+ + + ++ K E E+ G ++V VLS+P W G+
Sbjct: 131 SMAKSVLKMEPNSRVSLVYGNRSEESIIFKQKLHELEAQYGNRLVVSHVLSRPSEVWVGQ 190
Query: 242 TGYVQAAFS-RAKKIFNPQGT--GVVLCGQKQMAEEV 275
G + + R K FN + +CG +M E++
Sbjct: 191 KGRISQGLAIRLMKEFNTDFSTDNFYMCGPNEMMEDI 227
>gi|392546269|ref|ZP_10293406.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas rubra ATCC 29570]
Length = 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 CGKMSSYIWSLKEGDKVTISGPFGEFFAKDTDA------EMVFVGGGAGMAPMRSHI--- 292
Query: 191 FSSKER--SDVRL--YYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGET 242
F +R SD ++ +YGAR+ + M Y + F + E+ + LS QP+ NW G T
Sbjct: 293 FDQLKRLNSDRKMSFWYGARSKREMFYVEDFDGLQAENDNFQWHVALSDPQPEDNWEGYT 352
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + K P+ +CG M V +++ GV E IL
Sbjct: 353 GFIHNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIL 402
>gi|238786290|ref|ZP_04630231.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia bercovieri ATCC 43970]
gi|238712796|gb|EEQ04867.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia bercovieri ATCC 43970]
Length = 329
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 20/194 (10%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + I+ A+++ V + + P + H GQYL + + D G +IA+ P
Sbjct: 101 PCRIDTITRLADNVVEVLLRV---PPASKLHYLPGQYLDV-IGDGGLRRSYSIANAPR-- 154
Query: 118 SASGAFEFLVKSVA-GSTAEVLCGLKK-GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
G E ++ V G+ + G K D++ + +G D+ + T++ A
Sbjct: 155 -TDGKLELQIREVEQGAMSRYWFGSAKPNDLLRLEGPLGTFCLRDK-----DASTIVFLA 208
Query: 176 TGSGISPIRSLIESGFSS---KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS 232
TG+GI+P+++++E ++ E + +Y+G R + + + F ES +PVLS
Sbjct: 209 TGTGIAPVKAMLEQLLNNPALAEGKKILIYWGGRTVDDIYWAPHF---ESLNAVFIPVLS 265
Query: 233 QPDGNWSGETGYVQ 246
+ +W G TGYVQ
Sbjct: 266 RAGADWQGRTGYVQ 279
>gi|339500338|ref|YP_004698373.1| ferredoxin--NAD(+) reductase [Spirochaeta caldaria DSM 7334]
gi|338834687|gb|AEJ19865.1| Ferredoxin--NAD(+) reductase [Spirochaeta caldaria DSM 7334]
Length = 377
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 92 GQYLQLRVVDVG--KPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
GQY QL V G K + S S EFL++ V G +T V LK+GD V
Sbjct: 168 GQYAQLVVPPYGELKESIQRAYSMSSTPQDKEHIEFLIRLVPGGIATTWVHQHLKEGDPV 227
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE--RSDVRLYYGA 205
E+ G FAV D ++ A GSG++P +S++ + + D+ ++GA
Sbjct: 228 EVVGPFGE-FAVR-----DTDAVMVFVAGGSGMAPFKSMLNHMAQTGQWTNRDIWYFFGA 281
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSR--AKKIFNPQ 259
R+ + M Y D+ + VP LS+P + W+G G + ++I +
Sbjct: 282 RSKRDMFYLDEMADLAKRFPNFHFVPALSEPKPEDEWTGPVGLITNVLDSYFKEQISKDK 341
Query: 260 GTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M + ++ A G+ +KI
Sbjct: 342 PMEGYLCGSPGMIDACIKVMTANGIGQDKI 371
>gi|237809733|ref|YP_002894173.1| Na(+)-translocating NADH-quinone reductase subunit F [Tolumonas
auensis DSM 9187]
gi|237501994|gb|ACQ94587.1| NADH:ubiquinone oxidoreductase, subunit F [Tolumonas auensis DSM
9187]
Length = 408
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA ++ G+G++P+RS I F
Sbjct: 243 GQMSSYIWSLKPGDKVTISGPFGEFFA------KKTKAEMVFIGGGAGMAPMRSHI---F 293
Query: 192 SSKERSD----VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETG 243
+R D + +YGAR+++ M Y D F + ++ ++ QP+ NW+G TG
Sbjct: 294 DQLKRLDSDRKISFWYGARSVREMFYVDDFNQLAATHPNFTWNVALSDPQPEDNWTGHTG 353
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ S + P+ +CG M V ++ GV + IL
Sbjct: 354 FIHNVLYESYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDDNIL 402
>gi|334703569|ref|ZP_08519435.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
caviae Ae398]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ + LS QP+ NW G TG++
Sbjct: 296 RRLKTKRKMSFWYGARSKREMFYVEDFDMLQAENDNFQWHVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLFENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKNLGVEDENIL 401
>gi|375333571|gb|AFA53037.1| hydroxylase subunit 6 [Pseudomonas sp. A3(2012)]
Length = 353
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L V ++A+PPS A E ++ V G +T + LK GD V
Sbjct: 133 QAGQYINLTQPGVEGSRAFSLANPPSQADE---VELHIRLVEGGAATGFIHRQLKVGDAV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
E+S G+ F V Q D ++ A GSG+S +S+I + + + L+ GARN
Sbjct: 190 ELSGPYGQ-FFVRGSQAGD----LIFIAGGSGLSSPQSMILDLLAQGDTRRITLFQGARN 244
Query: 208 LKRMAYQDKFKEWES--SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ ++ F+E + S VP L+Q D W G G+V A AK F+ + +G
Sbjct: 245 RAELYNRELFEELAARHSNFSYVPALNQAHDDPEWQGFKGFVHDA---AKAHFDGRFSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + + ++
Sbjct: 302 KAYLCGPPPMIDAAITTLM 320
>gi|222056796|ref|YP_002539158.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Geobacter daltonii FRC-32]
gi|221566085|gb|ACM22057.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter
daltonii FRC-32]
Length = 281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF +SP + G E ++ G E L L+ G+ + +
Sbjct: 45 RAGQFAEYSAFGAGESTFCIASSP----TRKGFVECCFRA-TGRVTEALRRLEVGETIGV 99
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
G F +++ + L+F A G + P+R++I + +++ D+ + YGAR
Sbjct: 100 RGPYGNSFPIEQF-----FGKNLVFVAGGIALPPLRTVIWNCLDWRDKFGDITIVYGART 154
Query: 208 LKRMAYQDKFKEWESSG-VKIVPVLSQPDGN---WSGETGYVQAAFSRA 252
+ Y+ + K+W+ G VK+V + P GN W G+ G+V A
Sbjct: 155 EADLVYKQELKDWQERGDVKLVKTVD-PGGNGPEWDGKVGFVPTILEEA 202
>gi|153010561|ref|YP_001371775.1| oxidoreductase FAD-binding subunit [Ochrobactrum anthropi ATCC
49188]
gi|151562449|gb|ABS15946.1| Oxidoreductase FAD-binding domain protein [Ochrobactrum anthropi
ATCC 49188]
Length = 338
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 27/239 (11%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAI-ASPPSFA 117
T + I A + + +++ +A +AGQY Q+ TF + A S A
Sbjct: 106 TRVVAIDDATHDIRQIRLEVETGEAVA---FKAGQYAQV--------TFDGVPARDYSMA 154
Query: 118 SASG--AFEFLVKSV-AGSTAE-VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLI 173
+ G EF ++ V G+T+E V LK GD V + +G F ++ P +L
Sbjct: 155 NQPGRDHLEFHIRHVPGGATSEHVARSLKVGDEVSVRGPLGSSFLREQHTGP-----ILA 209
Query: 174 FATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVL 231
A GSG++PI+S++E+ +S R + LY+GAR + + D F S+ + +PVL
Sbjct: 210 VAGGSGLAPIKSIVETALASGLRQPIHLYFGARTERDLYLVDHFSLLASTYDNLTFMPVL 269
Query: 232 SQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE-GVSSEKI 289
S+ + TG V A + N G + G M + + I+L E G+ E I
Sbjct: 270 SEVSRSDHFRTGLVTDAIVSDVQDLN--GWKAYMAGPPAMI-DASGIMLRELGLRGEDI 325
>gi|384083352|ref|ZP_09994527.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium HIMB30]
Length = 406
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + LK GD + + G FA D ++ G+G++P+RS I F
Sbjct: 241 GQMSSYTFNLKPGDKINVFGPFGEFFARDTDN------EMVFIGGGAGMAPMRSHI---F 291
Query: 192 SSKERSD----VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETG 243
+R + + +YGAR+L+ + Y+D++ KE E+ + QP+ NW+GETG
Sbjct: 292 DQLKRLNSTRKISFWYGARSLREVFYEDEYDQLAKENENFEWHLALSDPQPEDNWTGETG 351
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + K P+ +CG M V ++ GV E I+
Sbjct: 352 FIHNVVLENYLKDHPAPEDVEYYMCGPPMMNAAVIKMLKDLGVEDENIM 400
>gi|423111334|ref|ZP_17099029.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5243]
gi|423117343|ref|ZP_17105034.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5245]
gi|376376267|gb|EHS89048.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5245]
gi|376376774|gb|EHS89550.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5243]
Length = 233
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 28/214 (13%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS----FASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
RAGQYL + + + K F ++AS PS GA E + ++A V+ + K
Sbjct: 32 RAGQYLMVVMDERDKRPF-SMASTPSEQEFIELHIGASELNLYAMA-----VMDRILKER 85
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E+ G + ++ +E P +LI A G+G S +RS++ + + D+ +Y+G
Sbjct: 86 EIEVDLPHGEAW----LRDDEERPLILI-AGGTGFSYVRSILLTALARNPNRDIAIYWGG 140
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-- 261
R K + + + + G++I PV+ QPD W G TG V A + GT
Sbjct: 141 REAKHLYDLAELEALSVQHPGLRIEPVVEQPDAEWRGRTGTVLTA------VLQDYGTLG 194
Query: 262 --GVVLCGQKQMAEEVTSIVLAE-GVSSEKILKN 292
+ + G+ +MA+ + E G E++ +
Sbjct: 195 DHDIYIAGRFEMAKIARDLFCNERGAREERLFGD 228
>gi|334132843|ref|ZP_08506598.1| Phenol hydroxylase P5 protein [Methyloversatilis universalis FAM5]
gi|333441753|gb|EGK69725.1| Phenol hydroxylase P5 protein [Methyloversatilis universalis FAM5]
Length = 352
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRV-VDVGKPTFLAIASPPS 115
T T + +++P + LF +++ D +AGQY+ L + + G ++A+ PS
Sbjct: 108 TVTRIEQLTPTIKGLF---VELDRPLDF-----QAGQYINLDIGAEPGMSRAFSLANAPS 159
Query: 116 FASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLI 173
+ E ++ V G T + LK GD V++S GR F + P ++
Sbjct: 160 NGNE---VELNIRIVPGGRGTTWIHESLKAGDRVKLSGPYGRFFVRESAARP-----LIF 211
Query: 174 FATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVL 231
A GSG+S RS+I + + L YGARN + Y D F ++ VP L
Sbjct: 212 MAGGSGLSSPRSMILDLLARGYAQPITLVYGARNRAELYYHDDFVALAAAHPAFSYVPAL 271
Query: 232 S-QPDG-NWSGETGYV-QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
S +P G +W G G+ +AA + ++ F +G LCG M + + ++
Sbjct: 272 SDEPAGSDWDGFRGFAHEAALAHFREDF--RGHQAYLCGPPVMIDACINALM 321
>gi|408534343|emb|CCK32517.1| anaerobic sulfite reductase subunit B [Streptomyces davawensis JCM
4913]
Length = 268
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 10/176 (5%)
Query: 115 SFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
S A+G V++V G+ + LC + DV+ + G G+ + R + D V++
Sbjct: 56 SSVQATGGLAHTVRAV-GAVSAGLCAARSADVLGVRGPYGTGWELQRARGRD----VVVV 110
Query: 175 ATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQ 233
A G G++P+R LI + V + GAR + +++ + W ++ + + +
Sbjct: 111 AGGIGLAPLRPLILRALAEPAAYGRVNVLIGARTPADLIAREEIEGWRTAYTGVT--VDR 168
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
PD W G+ G V RA F P +CG + M + A G+ +++
Sbjct: 169 PDDGWRGDVGLVTDLLDRAD--FTPADAVAFVCGPEPMIRATARELAARGLPGDRV 222
>gi|375109220|ref|ZP_09755470.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Alishewanella jeotgali KCTC 22429]
gi|374570779|gb|EHR41912.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF
[Alishewanella jeotgali KCTC 22429]
Length = 597
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G A LC ++ G +E G + +++ P E + + G+G++P+R++++
Sbjct: 435 GIGATYLCSMQVGQSIEAEGPYGE--FLRQVESPRE---LFLIGGGAGMAPLRAILQEEL 489
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESSG-VKIVPVLS--QPDGNWSGETGYVQAA 248
V +YGARN + + Y ++ + G V VPVLS Q W G G+V A
Sbjct: 490 QDAGPRHVVYFYGARNRQELVYHEELLSLQRYGQVYYVPVLSEAQTQCQWDGAQGFVHEA 549
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ Q LCG +M + ++ GV+ E+I
Sbjct: 550 ALAYLAEHDWQRFDFYLCGPPRMLKATREMLAQLGVAKERI 590
>gi|294142694|ref|YP_003558672.1| NAD(P)H-flavin reductase [Shewanella violacea DSS12]
gi|293329163|dbj|BAJ03894.1| NAD(P)H-flavin reductase [Shewanella violacea DSS12]
Length = 236
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 33/241 (13%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
++P ++++ + + A D +AGQYL + + + K F +IAS P+
Sbjct: 11 VTPFNDAVYQIILKPETAFDF-----KAGQYLCVVMGEKDKRPF-SIASAPNA------- 57
Query: 124 EFLVKSVAGSTAEVL----------CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLI 173
E++ + + +E C L ++EI G + Q P L+
Sbjct: 58 EYIELHIGAAVSESYPMQVVERMKEC-LANDGLIEIEAPGGEAYLRHESQRPR-----LL 111
Query: 174 FATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVL 231
A G+G S I+S++E + ++ + LY+G RN M Y+ +EW + + VPVL
Sbjct: 112 IAGGTGFSYIKSIVEGQIALGQKIETTLYWGCRNADAMYYETIAREWHDAHPWLHFVPVL 171
Query: 232 SQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
+ G+W G+ + A + G + + G+ M + A GV E +
Sbjct: 172 EEAGGDWKGKKANLLAQIK--TDFVSLHGYDIYIAGRFDMVGAAREVFRAIGVEEEHLYG 229
Query: 292 N 292
+
Sbjct: 230 D 230
>gi|123443418|ref|YP_001007391.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|189030479|sp|A1JNZ2.1|NQRF_YERE8 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|122090379|emb|CAL13247.1| NADH-uniquinone oxidoreductase subunit F [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 407
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 S---SKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
SK R + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG+
Sbjct: 296 KRLHSKRR--ISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V ++ GV E I+
Sbjct: 354 IHNVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|194337503|ref|YP_002019297.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Pelodictyon phaeoclathratiforme BU-1]
gi|194309980|gb|ACF44680.1| oxidoreductase FAD/NAD(P)-binding domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 305
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 69 ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK 128
E LF + I D + + R GQ+L L V G P S +S++ EFL
Sbjct: 52 EKLFQLRI--IDPVERSLFRFRPGQFLMLEVPGYGD-------VPISISSSNSNHEFLEL 102
Query: 129 SV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
+ AG L L +G V I G F +D + + VL+ A G GI+P+R+
Sbjct: 103 CIRKAGHVTSALFTLTEGAHVAIRGPFGSAFPMDEMSGHN----VLLVAGGLGIAPLRAP 158
Query: 187 IESGFSSKERS-DVRLYYGARNLKRMAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGY 244
+ ++R DV L YGA+ ++ + +F EW+ + + + ++ D W G+ G
Sbjct: 159 LYWINEHRDRFLDVNLLYGAKEPSQLLFTWQFDEWKMINHINLHTIVEHGDSGWKGKKGM 218
Query: 245 VQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ F+ +P T ++CG M + V + G+ ++
Sbjct: 219 ITDLFNDIS--IDPAKTWAIVCGPPVMFKFVCGYLDRLGIPMNRMF 262
>gi|221272667|emb|CAX18351.1| ddhD [Yersinia pseudotuberculosis]
Length = 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFVGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIQHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>gi|330830800|ref|YP_004393752.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating subunit F
[Aeromonas veronii B565]
gi|406675953|ref|ZP_11083139.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AMC35]
gi|423202658|ref|ZP_17189237.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AER39]
gi|423208526|ref|ZP_17195080.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AER397]
gi|328805936|gb|AEB51135.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Aeromonas veronii B565]
gi|404614854|gb|EKB11833.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AER39]
gi|404618371|gb|EKB15291.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AER397]
gi|404626176|gb|EKB22986.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AMC35]
Length = 407
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F E E+ + QP+ NW G TG++
Sbjct: 296 RRLKSKRKMSFWYGARSKREMFYVEDFDMLAAENENFTWNVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLYENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKDLGVEDENIL 401
>gi|386817057|ref|ZP_10104275.1| Na(+)-translocating NADH-quinone reductase subunit F [Thiothrix
nivea DSM 5205]
gi|386421633|gb|EIJ35468.1| Na(+)-translocating NADH-quinone reductase subunit F [Thiothrix
nivea DSM 5205]
Length = 405
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V +S G FA E V I G+G++P+RS I
Sbjct: 240 GQMSSFIFNLKAGDKVTVSGPFGEFFA-----RKTENEMVFI-GGGAGMAPMRSHIYDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + + +YGAR+L+ Y D+F + + QP+ NW+G G++
Sbjct: 294 RRLKSKRKMSFWYGARSLREAFYVDEFDTLAAENPNFTWHMGLSEPQPEDNWTGYVGFIH 353
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K+ P+ LCG M V ++L GV E I+
Sbjct: 354 DVLYKNYLKEHSAPEECEYYLCGPPMMNAAVIRMLLDMGVERENIM 399
>gi|332531298|ref|ZP_08407210.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Hylemonella gracilis
ATCC 19624]
gi|332039245|gb|EGI75659.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Hylemonella gracilis
ATCC 19624]
Length = 352
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGA-------FEFLVKSVAGS--TAEVLCG 140
RAGQY+ + D + ++ +P + A A E ++ + G T V
Sbjct: 133 RAGQYVDFLLRDGSRRSYSMATAPHTRAGQPDATPPVGAMMELHIRHMPGGKFTDHVFGA 192
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR 200
+K+ +++ G F ++ + P VL+ A+G+G +PI++LIE
Sbjct: 193 MKEKEILRAEGPFGSFF----LREDSDKPLVLL-ASGTGFAPIKALIEQMQHKGITRPAT 247
Query: 201 LYYGARNLKRMAYQDKF--KEWESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIF 256
LY+G R + D K E +K VPV S P+ +W+G TG+V AA + I
Sbjct: 248 LYWGGRRPQDFYLNDWVVQKTAEMPHLKYVPVASDALPEDHWTGRTGFVHAAV--LQDIP 305
Query: 257 NPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
N G V CG + E + G+ E+ +
Sbjct: 306 NLSGHQVYACGAPIVVESAQRDYVKAGLPEEEFFAD 341
>gi|393763572|ref|ZP_10352190.1| FMN reductase [Alishewanella agri BL06]
gi|392605494|gb|EIW88387.1| FMN reductase [Alishewanella agri BL06]
Length = 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST------AEVLCGLKKGD 145
GQYLQL + + K F +IAS P A E + + AG + +G
Sbjct: 34 GQYLQLCLTENDKRPF-SIASIP----AQDLLELHIGAPAGDNWSSAALQHLQQAFAQGL 88
Query: 146 VVEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V++ +G G+ D +P V++ A G+G S + S+ + ++ + V LY+G
Sbjct: 89 SVQVEVGLGHAGWRQDSARP------VILLAGGTGFSYVHSIAMALAAASQDKPVFLYWG 142
Query: 205 ARNLKRMAYQDKFKEWESSGVK--IVPVLSQPDGNWSGETGYVQAA 248
R + YQ + ++W ++ K +PV+ +P NW G +G V A
Sbjct: 143 VRQEDALYYQAELQQWAAANAKYRFIPVVQEPGANWQGRSGLVHEA 188
>gi|365921545|ref|ZP_09445813.1| NADH:ubiquinone oxidoreductase, F subunit [Cardiobacterium valvarum
F0432]
gi|364575874|gb|EHM53236.1| NADH:ubiquinone oxidoreductase, F subunit [Cardiobacterium valvarum
F0432]
Length = 405
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GIMSSYIFNLKPGDKVTISGPFGEFFAKDTDA------EMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
+ + +YGAR+ + + YQ+ F KE+ + + + P+ NW+G TG++
Sbjct: 294 KRLHSKRKITFWYGARSKREIFYQEDFDALAKEFPNFTWHVALSDALPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
+ K P+ +CG M + V ++ GV E I L NF
Sbjct: 354 NVVYENHLKNHPAPEDCEYYMCGPPMMTKSVIGMLHNLGVEDENILLDNF 403
>gi|297537259|ref|YP_003673028.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Methylotenera versatilis 301]
gi|297256606|gb|ADI28451.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylotenera
versatilis 301]
Length = 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D GK ++A+ P E ++ + G T V + ++
Sbjct: 133 AGQYIEFLLKD-GKRRAFSLANAPH---VDNLLELHLRLIPGGQFTEYVFNEMPDKAILR 188
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F + P +++ A G+G +PI+ +IE + V LY+GA +L
Sbjct: 189 IEAPFGSFFLREESDKP-----IIMVAGGTGFAPIKGIIEHMLHNNINRPVTLYWGAHSL 243
Query: 209 KRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAA 248
K + + W E +K +PVLS + NW G TGYV A
Sbjct: 244 KDLYMPALPEAWAKEYPHIKFIPVLSDATSEDNWQGRTGYVHQA 287
>gi|163750787|ref|ZP_02158022.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
benthica KT99]
gi|161329482|gb|EDQ00476.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
benthica KT99]
Length = 415
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
G + + LK+GD V IS G FA E +IF G+G++P+RS I
Sbjct: 249 CGKMSSYIFSLKEGDKVTISGPFGEFFA-------KETDNEMIFVGGGAGMAPMRSHIFD 301
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETGY 244
K + +YGAR+ + M Y + F E E+ + QP+ NW G+TG+
Sbjct: 302 QLKRLKTDRKISFWYGARSKREMFYVEDFDGLASENENFDWHVALSDPQPEDNWEGKTGF 361
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ S + P+ +CG M V ++ GV E IL
Sbjct: 362 IHNVLFESYLRDHEAPEDCEFYMCGPPMMNAAVIGMLKDLGVEDENIL 409
>gi|115511385|dbj|BAF34297.1| propane monooxygenase reductase [Mycobacterium sp. TY-6]
Length = 316
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGA---FEFLVKSV-AGSTAEVLCGLKKGDV 146
AGQ++++ V P L S ASA G+ EF++K + G+ + L L+ G
Sbjct: 134 AGQFMEIAV-----PGALDQWRSYSLASAPGSAQELEFVIKVIDGGAFSGQLDMLEVGAR 188
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ + G G+ + +P VL+ ATGSGISPI S++E E +YGAR
Sbjct: 189 LRVRGPFGDGYLREGDRP------VLLVATGSGISPILSILEHAAQCGEERTFIFFYGAR 242
Query: 207 NLKRMAYQDKFKEWES-SGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ +D+ E + PVLS+ P+ +W GE V R +I +
Sbjct: 243 IAAELPCEDRMGELRGLLDLTYRPVLSKPAPECDWLGEPSRVTTEVRR--RIGDGAPYDA 300
Query: 264 VLCGQKQMAEEVTSIV 279
+CG+ +M + V +++
Sbjct: 301 YVCGKPEMCDAVIALL 316
>gi|182419540|ref|ZP_02950789.1| sulfite reductase, subunit B [Clostridium butyricum 5521]
gi|182376575|gb|EDT74150.1| sulfite reductase, subunit B [Clostridium butyricum 5521]
Length = 264
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 52 DTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
D + + P IS E+ + +S DI H GQ+LQL + G+
Sbjct: 2 DNNILSTKPCEIISIKKENAHEYTFKVS--TDIIPEH---GQFLQLSIPKFGE------- 49
Query: 112 SPPSFAS-ASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S + +G +F ++SV G + L+ GD + + G+G+ ++ + +
Sbjct: 50 APISVSGFGNGYMDFTIRSV-GKVTNAIFRLQPGDNIYLRGPYGKGWPFEKFKDKN---- 104
Query: 171 VLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
++I A G+G++P+RS+I ++K + + L +G R+ + ++D+ K+W++ +
Sbjct: 105 LVIVAGGTGVAPVRSMINEVCNNKGYLTSLNLLFGFRDANAILFRDELKKWKN---EFNT 161
Query: 230 VLSQPDGNWSG-ETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+ + + N G E G V ++ K +++ G M L GV +K
Sbjct: 162 IYTLDNENIDGFEQGLVTKHINKVLKKEFENNYEIIVVGPPMMMHFTCLEFLKLGVPDKK 221
Query: 289 ILKNF 293
I +F
Sbjct: 222 IWTSF 226
>gi|340362929|ref|ZP_08685289.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Neisseria macacae ATCC
33926]
gi|339886866|gb|EGQ76482.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Neisseria macacae ATCC
33926]
Length = 335
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIV 228
+++ ATG+G +PIRS++ V Y+GAR+ + ++ +E +
Sbjct: 207 IILLATGTGYAPIRSILLDLIRQDSSRAVHFYWGARHQDDLYALEEAQELTGRLKNARFT 266
Query: 229 PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
PVLS+ W GE GYVQ A AK + G V CG M E S++ A+
Sbjct: 267 PVLSKAAEGWQGEKGYVQTA--AAKDYPDLSGYEVYACGSVAMTESAKSVLTAQ 318
>gi|423118813|ref|ZP_17106497.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5246]
gi|376400557|gb|EHT13169.1| Na(+)-translocating NADH-quinone reductase subunit F [Klebsiella
oxytoca 10-5246]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
+ + +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 295 LKRLHSKRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWNGHTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV + I+
Sbjct: 355 HNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDDNIM 401
>gi|417551335|ref|ZP_12202413.1| oxidoreductase, FAD-dependent [Acinetobacter baumannii Naval-18]
gi|417564837|ref|ZP_12215711.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC143]
gi|395556593|gb|EJG22594.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC143]
gi|400385790|gb|EJP48865.1| oxidoreductase, FAD-dependent [Acinetobacter baumannii Naval-18]
Length = 353
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLTTGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|330831664|ref|YP_004394616.1| NAD(P)H-flavin reductase [Aeromonas veronii B565]
gi|406675115|ref|ZP_11082305.1| hypothetical protein HMPREF1170_00513 [Aeromonas veronii AMC35]
gi|423211693|ref|ZP_17198226.1| hypothetical protein HMPREF1169_03744 [Aeromonas veronii AER397]
gi|328806800|gb|AEB51999.1| NAD(P)H-flavin reductase [Aeromonas veronii B565]
gi|404613192|gb|EKB10227.1| hypothetical protein HMPREF1169_03744 [Aeromonas veronii AER397]
gi|404627885|gb|EKB24674.1| hypothetical protein HMPREF1170_00513 [Aeromonas veronii AMC35]
Length = 232
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ E+ ++++HV++ P A S + GQYL + + D K F +IA+ P+
Sbjct: 8 VEELREYVDTIWHVAL----TPQQAISF-KPGQYLLVVMSDSDKRPF-SIANSPT---RP 58
Query: 121 GAFEFLVKSV--AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
G E + + +VL +++ +E+ G+ F D P +++ A G+
Sbjct: 59 GVLELQIGATPENAYAGQVLARMREQGEIEVELPAGKAFLRDESPRP-----LILMAGGT 113
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDG 236
G S RS++E + + V Y+G R + ++ ++WE + + +PV+ +P+
Sbjct: 114 GFSYARSILEYLIDTGSKRPVFFYWGVRQAHWLYELEQMQQWERDYAPLTFIPVVQEPEA 173
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+W+G+ G V A + + + G+ +MA G E+I +
Sbjct: 174 DWTGKCGLVHKAI--MDDFVSLHDYDIYVAGRFEMAGAAREEFKILGAEPERIFGD 227
>gi|432343588|ref|ZP_19592744.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Rhodococcus
wratislaviensis IFP 2016]
gi|417073308|gb|AFX59915.1| putative methane/propane monooxygenase reductase [Rhodococcus
wratislaviensis]
gi|430771377|gb|ELB87249.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Rhodococcus
wratislaviensis IFP 2016]
Length = 356
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVE 148
RAGQY + +D G ++ +PPS + F VK V G + VL + G +
Sbjct: 137 RAGQYAEF-TLDTGDRRSYSLVNPPS---SGRELTFCVKRVQNGVFSGVLDRIGPGSHLH 192
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
+ G F + +P V+ GSGI+P+ S++ + +R YYGAR
Sbjct: 193 LEAPFGTMFLRETGRP------VIAVGIGSGIAPLLSILTDAADQQVDVPIRFYYGARTT 246
Query: 209 KRMAYQDKFKEWES--SGVKIVPVLSQ--PDG-NWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ Y D+ E + +P LSQ PD +G G V A A+ I +
Sbjct: 247 GDLVYLDELAELTRRLRDFQFIPCLSQGSPDTLPRNGRAGRVTRAV--AEDIPDASLYDA 304
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG +M + V ++ A+G+ +I
Sbjct: 305 YLCGAPEMCDAVGRLLEAKGLPEARI 330
>gi|24372692|ref|NP_716734.1| Na-translocating NADH-quinone reductase subunit F NqrF [Shewanella
oneidensis MR-1]
gi|24346747|gb|AAN54179.1| Na-translocating NADH-quinone reductase subunit F NqrF [Shewanella
oneidensis MR-1]
Length = 418
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|419965536|ref|ZP_14481479.1| phenol hydrolase [Rhodococcus opacus M213]
gi|414569020|gb|EKT79770.1| phenol hydrolase [Rhodococcus opacus M213]
Length = 339
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS EF V++ AG A + L GD +
Sbjct: 131 AGQYAELIVPGSGVARQYSMANPPS---EQRLLEFHVRNTAGGLATEGWIFDSLAVGDRI 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ F V + E P +LI G+G++P++S++ + LY+G R
Sbjct: 188 DLRGPLGQ-FGVVEAR---EEPAILI-GGGTGLAPLKSIVRHALDHDLLPAIHLYHGGRR 242
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ E++ + PVLS+ NW G TG V A + +G L
Sbjct: 243 EADLYDVECFRAMEATDSRFHYHPVLSEE--NWDGATGMVTDAV--LGDFASCRGHSAYL 298
Query: 266 CGQKQM 271
CG M
Sbjct: 299 CGPPAM 304
>gi|407715764|ref|YP_006837044.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Cycloclasticus sp. P1]
gi|407256100|gb|AFT66541.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Cycloclasticus sp. P1]
Length = 251
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVK-SVAGSTAEVLCGLKKGDVVE 148
+AGQYL + + ++ K ++ +IAS P + G E LVK G+ A L LK GDVV+
Sbjct: 47 KAGQYLAVLLPNLDKASYYSIASSP---NKKGEVELLVKEDKLGTGAAYLYSLKAGDVVQ 103
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY--GAR 206
+ MG + + D ++ A SG S +RS+I + + ++ ++Y G R
Sbjct: 104 LHMPMGEAYLRE-----DSKRNLIFVAGASGASYVRSMIHYLDETDQLANREVHYFLGCR 158
Query: 207 NLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSR 251
+ D + + SG P LS + +W G TG + R
Sbjct: 159 EESELLESDFMQALAEKYSGFHYHPALSHQE-DWEGHTGLITEVVDR 204
>gi|433550660|ref|ZP_20506704.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica IP 10393]
gi|431789795|emb|CCO69744.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica IP 10393]
Length = 399
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 234 GIMSSYIWSLKPGDKVIISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 287
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 288 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 347
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 348 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 393
>gi|237809711|ref|YP_002894151.1| FMN reductase [Tolumonas auensis DSM 9187]
gi|237501972|gb|ACQ94565.1| oxidoreductase FAD/NAD(P)-binding domain protein [Tolumonas auensis
DSM 9187]
Length = 232
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 20/240 (8%)
Query: 57 TPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSF 116
T L + AE ++HV + P+ ++ + GQYLQ+ + + K +F +IAS P+
Sbjct: 4 TVCHLETLHECAEHIWHVRL----IPEQQIAY-KPGQYLQVIMGEKDKRSF-SIASSPT- 56
Query: 117 ASASGAFEFLVKSVAGST--AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
E + + G+ +VL L+ ++I +G + + P +L+
Sbjct: 57 --RGNVLELQIGATPGNPYPGQVLEALRTNGKIDIEMPLGNAYLREHSDRP-----ILLI 109
Query: 175 ATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS 232
A G+G S RS+++ + LY+G R ++ ++ W E + VPV+
Sbjct: 110 AGGTGYSYARSILQYLVDHQMPRRTYLYWGVRKADQLYEGEEVLNWASEFKNLTFVPVVQ 169
Query: 233 QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
PD +W G G V A F+ + + G+ +MA V + V E++ +
Sbjct: 170 FPDDDWLGRAGLVHEAVLSDFHSFSQ--FDIYVAGRFEMAAVVRDALRHRDVQEEQLFGD 227
>gi|417544496|ref|ZP_12195582.1| oxidoreductase, FAD-dependent [Acinetobacter baumannii OIFC032]
gi|421665439|ref|ZP_16105552.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC087]
gi|421672789|ref|ZP_16112743.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC099]
gi|400382384|gb|EJP41062.1| oxidoreductase, FAD-dependent [Acinetobacter baumannii OIFC032]
gi|410378483|gb|EKP31101.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC099]
gi|410390197|gb|EKP42594.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC087]
Length = 353
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLTTGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|134103628|ref|YP_001109289.1| flavohemoprotein [Saccharopolyspora erythraea NRRL 2338]
gi|291004836|ref|ZP_06562809.1| flavohemoprotein [Saccharopolyspora erythraea NRRL 2338]
gi|133916251|emb|CAM06364.1| flavohemoprotein [Saccharopolyspora erythraea NRRL 2338]
Length = 367
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS-TAEVLCGLKK-GDVVEI 149
GQY+ + V +P +P + G EF +KSV G + L G + GD I
Sbjct: 168 GQYVSVEVPQ--RPRLWRYLTPANAPREDGTMEFHIKSVEGGWVSRALVGHARPGDTWRI 225
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN-- 207
MGR +VDR + D VL+ A G+G++P+R++I+ + V+L+YG RN
Sbjct: 226 GSPMGR-LSVDRERDRD----VLMIAGGTGLTPMRAIIDDLAQYGDNPRVQLFYGGRNRD 280
Query: 208 -------LKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
L+R+A + + + + PVL G E G + +R
Sbjct: 281 DLYDLEGLQRVAMSNPW-------LTVTPVLENDPGATGAEHGTLADVVTRYGAWSE--- 330
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
V++ G M S +L G + I
Sbjct: 331 RDVLVSGSPAMIRATVSRMLVAGTPLDHI 359
>gi|456064045|ref|YP_007503015.1| Oxidoreductase FAD/NAD(P)-binding domain protein [beta
proteobacterium CB]
gi|455441342|gb|AGG34280.1| Oxidoreductase FAD/NAD(P)-binding domain protein [beta
proteobacterium CB]
Length = 346
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST-AEVLCG-----LKKG 144
AGQYL+ + D G+ +IA+PP G E ++ + G + + G LK+
Sbjct: 134 AGQYLEFLLKD-GQRRAYSIANPPD---QEGPLELHIRHLPGGLFTDFVFGAKDPALKEK 189
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
D++ +G F + + P ++ A G+G +PI+S+IE K + LY+G
Sbjct: 190 DILRFEGPLGSFFLREDSKKP-----IIFVAAGTGFAPIKSIIEQMQLKKIHRPIYLYWG 244
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAA 248
R + + W K +PV+S P+ W+G TG+V A
Sbjct: 245 GRRPSDLYLDALCQSWARDIPDFKYIPVISDALPEDQWTGRTGFVHQA 292
>gi|400287083|ref|ZP_10789115.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychrobacter
sp. PAMC 21119]
Length = 411
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSD- 198
LK GD V +S G FA D T +IF G+G++P+RS I F +R +
Sbjct: 255 LKPGDKVTVSGPYGEFFAKDT-------ETEMIFVGGGAGMAPMRSHI---FDQLKRLNS 304
Query: 199 ---VRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQP--DGNWSGETGYVQAAF-- 249
+ +YGAR+++ M Y + + + E+ + + LS P + NW G TG++
Sbjct: 305 DRKISFWYGARSIREMFYVEDYDQLEAEFANFEWHVALSDPLPEDNWDGYTGFIHNVLLE 364
Query: 250 SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M V ++ + GV E I+
Sbjct: 365 EYLKDHPNPEDCEYYMCGPPMMNAAVIDMLHSLGVEDENIM 405
>gi|421808481|ref|ZP_16244328.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC035]
gi|410415629|gb|EKP67414.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC035]
Length = 353
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLTTGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|420257429|ref|ZP_14760187.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. enterocolitica WA-314]
gi|404515078|gb|EKA28855.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. enterocolitica WA-314]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|331006606|ref|ZP_08329893.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC1989]
gi|330419590|gb|EGG93969.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC1989]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESG 190
G + + +K GD + + G FA D ++ G+G++P+RS L +
Sbjct: 242 GQMSSYVFNMKPGDKIAVYGPFGEFFAKDTDA------EMVFIGGGAGMAPMRSHLFDQL 295
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
+ + +YGAR+L+ M Y+D++ KE E+ + QP+ NW G TG++
Sbjct: 296 KRLNSKRKMSFWYGARSLREMFYEDEYDMLAKENENFEWHVALSDPQPEDNWDGLTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V ++ GV E I+
Sbjct: 356 NVLFEEYLKNHPAPEDCEYYMCGPPMMNQAVIKMLKDLGVEDENIM 401
>gi|374584589|ref|ZP_09657681.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptonema illini
DSM 21528]
gi|373873450|gb|EHQ05444.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptonema illini
DSM 21528]
Length = 340
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 53/311 (17%)
Query: 11 LPHAHVSQTFPPM--SILRRIPLLH---LKPQRRRLATLAAAAVRQDTTVWTP-TPLA-- 62
LP + +P + I R ++H + L T A+ ++ P TPLA
Sbjct: 6 LPSRQTDRDYPHLRKKIDRNAKMMHSSGMSAHATLLPTEKIQAIESPPMLYKPATPLACT 65
Query: 63 -----EISPA--AESLFHVSIDISDAPDI----------ASSHTRAGQYLQLRVVDVGKP 105
++P +E + H+ ID+ D + A T G+ ++R+ + P
Sbjct: 66 VLRNERLTPEDYSEDVRHIVIDLRDRDYVYAEGQSMGVMAPGTTPDGKAHRVRLYSIASP 125
Query: 106 TFLAIASPPSFASASG------AFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAV 159
A P + A +E + + G + LC L++GD V I+ G+ FA+
Sbjct: 126 G----AGEPGYERAVALCVKRVVYETEEQRMEGICSNFLCDLREGDTVPITGPNGKNFAL 181
Query: 160 DRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE--RSDVRLYYGARNLKRMAY---- 213
P D+ +L+F TG+GI+P RS + + S + ++V L++G+R Y
Sbjct: 182 ----PADDETDLLLFGTGTGIAPFRSFLMNLHSRPKPYGANVHLFFGSRLKIDHIYANDL 237
Query: 214 -QDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP----QGTGVVLCGQ 268
D K ++ +I LS+ + + YV +++ P + + +CG
Sbjct: 238 NDDLLKHSQNERFQIHSALSREN---PAQKVYVADLLKMKQELIEPILDRKNFAIYICGL 294
Query: 269 KQMAEEVTSIV 279
K M + + + V
Sbjct: 295 KGMEKGIEAFV 305
>gi|334132704|ref|ZP_08506460.1| Putative ferredoxin-NAD+ reductase [Methyloversatilis universalis
FAM5]
gi|333442188|gb|EGK70159.1| Putative ferredoxin-NAD+ reductase [Methyloversatilis universalis
FAM5]
Length = 337
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL---VKSVAGS--TAEVLCGLKKGD 145
AGQY+ + + + +F S A+A EF+ ++ V G T V +K+ D
Sbjct: 134 AGQYIDFLLKEGKRRSF-------SIANAPHDDEFITLHIREVPGGHFTGHVFNSMKERD 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ G F + ++ P V++ A G+G +P++++IE + LY+GA
Sbjct: 187 ILRFEGPHGSFFLREDVERP-----VVMVAGGTGFAPMKAVIEHAIKVGYTQPITLYWGA 241
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGN--WSGETGYVQ 246
R + + + + W ++ G + VPVLS+P W+G TG V
Sbjct: 242 RTKQDLYMHELAESWTAALPGFRYVPVLSEPAAGDAWTGRTGLVH 286
>gi|354612913|ref|ZP_09030851.1| Nitric oxide dioxygenase [Saccharomonospora paurometabolica YIM
90007]
gi|353222714|gb|EHB87013.1| Nitric oxide dioxygenase [Saccharomonospora paurometabolica YIM
90007]
Length = 439
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY + V +P SP + G+ EF V++V G + ++ ++GD
Sbjct: 238 RAGQYFSVEVPQ--RPRLWRHLSPANAPRPDGSLEFHVRAVDGGWVSRAIVGHTRQGDEW 295
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I +G G VDR YP VL+ A G+G++P+++L++ V +YG R
Sbjct: 296 RIGPPLG-GLHVDREA---GYP-VLMIAGGTGVAPLQALVDELGRFVTNPPVTFFYGGRT 350
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ D+ + ++ + + PV+ PDG E G + A +R + V++
Sbjct: 351 RADLYALDQVRGLAATNPWLTVRPVVEHPDGMPGFEHGTLAEAVTRRGPWAD---HDVLV 407
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G M + S +L G + +I
Sbjct: 408 SGSPGMIKGTVSRMLVAGTALHQI 431
>gi|365848136|ref|ZP_09388615.1| NADH:ubiquinone oxidoreductase, F subunit [Yokenella regensburgei
ATCC 43003]
gi|364571337|gb|EHM48928.1| NADH:ubiquinone oxidoreductase, F subunit [Yokenella regensburgei
ATCC 43003]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSS-KERSD 198
LK GD V IS G FA E ++F G+G++P+RS I +
Sbjct: 251 LKAGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQLKRLGSKRK 303
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSG----VKIVPVLSQPDGNWSGETGYVQAAF--SRA 252
+ +YGAR+L+ M Y D+F++ + +QP+ NW+G TG++ +
Sbjct: 304 ISFWYGARSLREMFYDDEFEQLARDNPNFTFHVALSDAQPEDNWTGYTGFIHNVLYENYL 363
Query: 253 KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ P+ +CG M V S++ GV E I+
Sbjct: 364 RDHPAPEDCEFYMCGPPVMNAAVISMLKNLGVEDENIM 401
>gi|332534408|ref|ZP_08410248.1| NAD(P)H-flavin reductase [Pseudoalteromonas haloplanktis ANT/505]
gi|332036142|gb|EGI72617.1| NAD(P)H-flavin reductase [Pseudoalteromonas haloplanktis ANT/505]
Length = 237
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLGEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLRNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G + +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIEA----GLGISQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
+G + + + + W S K +PV+ P NW G TGYV A + I + +
Sbjct: 142 WGVKEESALYAHTEMQTWADSHENFKFIPVVENPSANWQGHTGYVHKAV--MQDIVSLEP 199
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ + G+ M V + G E + +
Sbjct: 200 YDIYMAGRFDMIGIVRDDFITHGAIRENMYAD 231
>gi|311280782|ref|YP_003943013.1| NADH:ubiquinone oxidoreductase subunit F [Enterobacter cloacae
SCF1]
gi|308749977|gb|ADO49729.1| NADH:ubiquinone oxidoreductase, subunit F [Enterobacter cloacae
SCF1]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKER--- 196
LK GD V IS G FA E ++F G+G++P+RS I F +R
Sbjct: 251 LKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHI---FDQLKRLHS 300
Query: 197 -SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAF-- 249
+ +YGAR+L+ M Y D+F++ E+ LS QP+ NW+G TG++
Sbjct: 301 HRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPQPEDNWTGYTGFIHNVLYN 360
Query: 250 SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV + IL
Sbjct: 361 NYLKDHPAPEDCEFYMCGPPVMNTAVIKMLKDLGVEDDNIL 401
>gi|423205567|ref|ZP_17192123.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AMC34]
gi|404623842|gb|EKB20691.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
veronii AMC34]
Length = 407
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F E E+ + QP+ NW G TG++
Sbjct: 296 RRLKSKRKMSFWYGARSKREMFYVEDFDMLAAENENFTWNVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLYENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKDLGVEDENIL 401
>gi|51595348|ref|YP_069539.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis IP 32953]
gi|153950337|ref|YP_001402012.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis IP 31758]
gi|186894367|ref|YP_001871479.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis PB1/+]
gi|56405003|sp|Q66DP5.3|ASCD_YERPS RecName: Full=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase
reductase; AltName: Full=CDP-6-deoxy-delta-3,4-glucoseen
reductase; Short=E3
gi|23321112|gb|AAN23052.1|AF461769_1 CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
gi|6580713|emb|CAB63289.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis str. PA3606]
gi|51588630|emb|CAH20238.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis IP 32953]
gi|152961832|gb|ABS49293.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis IP 31758]
gi|186697393|gb|ACC88022.1| oxidoreductase FAD/NAD(P)-binding domain protein [Yersinia
pseudotuberculosis PB1/+]
gi|257228943|gb|ACV52991.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
gi|347810932|gb|AEP25486.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
Length = 329
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFVGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>gi|392553761|ref|ZP_10300898.1| FMN reductase [Pseudoalteromonas spongiae UST010723-006]
Length = 237
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 22/236 (9%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
I+P E ++ V + S+ AG YLQL + + K F +IAS PS
Sbjct: 11 ITPLTEFVYKVELKPSEPVSF-----EAGHYLQLVLGEKDKRAF-SIASRPS------QT 58
Query: 124 EFLVKSVAGS-----TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E L + S + L LK+ + G + +++ E P VL+ A G+
Sbjct: 59 ELLELHIGASEENSYAMQALDHLKEHFANNTQAELEVGLGISQLRTESELPLVLL-AGGT 117
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDG 236
G S ++S+ + K V Y+G R+ + +D+ ++W +S +PV+
Sbjct: 118 GFSYVKSMADHLAEIKSTRPVFFYWGVRDESALYAKDEMEKWAASQANFNFIPVVEHATD 177
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
W G TGYV A K I + + + + G+ M V + G E + +
Sbjct: 178 TWQGHTGYVHKAV--MKDIVSLEPYEIYMAGRFDMIGPVRDDFINHGAIRENMYAD 231
>gi|78358569|ref|YP_390018.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Desulfovibrio alaskensis G20]
gi|78220974|gb|ABB40323.1| oxidoreductase FAD/NAD(P)-binding domain protein [Desulfovibrio
alaskensis G20]
Length = 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 13/217 (5%)
Query: 76 IDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTA 135
+ ++D + + GQ QL V G+ TF+ I SPP+ +F V V T
Sbjct: 31 VRLNDPAAMDNFQFEPGQVGQLSVFGAGESTFV-INSPPTRKEY---LQFSVMKVGELTG 86
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK- 194
+ L L+ GD + + +G F ++Q D ++ G G++P+R+L+ ++
Sbjct: 87 K-LHSLRAGDQIGVRAPLGNAFPYRQMQGKD----IVFIGGGIGMAPLRTLLLYMLDNRG 141
Query: 195 ERSDVRLYYGARNLKRMAYQDKFKEW-ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
+ + L YGAR+ MA+ + +W E + V + P W G +
Sbjct: 142 DYGKITLLYGARSPADMAFSYELPQWLERDDMHTVLTVDNPADEWPHRVGLIPNILKEMN 201
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+PQ V CG M + + G + E+I+
Sbjct: 202 P--SPQNAVAVTCGPPIMIKFTIQALHELGFADEQII 236
>gi|336310364|ref|ZP_08565336.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. HN-41]
gi|335866094|gb|EGM71085.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. HN-41]
Length = 418
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENENFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|1813616|gb|AAB41725.1| flavin reductase [Aeromonas hydrophila]
Length = 233
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 63 EISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFL--AIASPPSFASAS 120
E+ ++++HV++ AP A S + GQYL + + D K L +A P F
Sbjct: 10 ELREYVDTIWHVAL----APQQAIS-FKPGQYLLVVMSDSDKGPLLHRQLADPLRFIELH 64
Query: 121 -GAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
GA E + + A V+ + K + + G + D +PP L+ A G+G
Sbjct: 65 VGASEHNLYAGA-----VMDRVLKAHEINVDVPHGLAWLRDSEEPPK-----LLIAGGTG 114
Query: 180 ISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES-----SGVKIVPVLSQP 234
S RS++ + S + D+ +Y+G R + + E E+ G+K+VPV+ QP
Sbjct: 115 FSYTRSILLTALSRQPNKDITMYWGGREEQHLY---DLLELEAIALRHPGLKVVPVVEQP 171
Query: 235 DGNWSGETGYVQAA 248
D W G TG V A
Sbjct: 172 DAGWRGRTGTVLTA 185
>gi|223590084|sp|A5DQE4.2|MCR1_PICGU RecName: Full=NADH-cytochrome b5 reductase 2; AltName:
Full=Mitochondrial cytochrome b reductase
gi|190348851|gb|EDK41397.2| hypothetical protein PGUG_05495 [Meyerozyma guilliermondii ATCC
6260]
Length = 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 112 SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S G +F++K G + GLK+GD V +G V P+++ +
Sbjct: 101 TPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSF-----KGPIVKWKWEPNQFQS 155
Query: 171 VLIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVK 226
+ + G+GI+P+ L+ E + ++++ V+L+YG + + + D E V
Sbjct: 156 IALIGGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDILIKKELDDIAEKHKDQVS 215
Query: 227 IVPVLSQPDGNWSGETGYVQAAF--------SRAKKIF--NPQGTGVVLCGQK---QMAE 273
I + + NW GETG++ F S+ K+F P G L G K
Sbjct: 216 ITYFVDKASANWKGETGHIDKEFLQSNLPGPSKDSKVFVCGPPGLYKALSGVKVSPTDQG 275
Query: 274 EVTSIVLAEGVSSEKILK 291
EVT ++ G + E + K
Sbjct: 276 EVTGVLAELGYTKENVYK 293
>gi|420639093|ref|ZP_15127572.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-25]
gi|420764363|ref|ZP_15238099.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-71]
gi|420769582|ref|ZP_15242780.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-72]
gi|420855199|ref|ZP_15319361.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-103]
gi|391508306|gb|EIR62059.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-25]
gi|391635200|gb|EIS74389.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-71]
gi|391637200|gb|EIS76147.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-72]
gi|391724805|gb|EIT54342.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-103]
Length = 399
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 234 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 287
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 288 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 347
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 348 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 393
>gi|421498325|ref|ZP_15945443.1| nqrF [Aeromonas media WS]
gi|407182626|gb|EKE56565.1| nqrF [Aeromonas media WS]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F E+ + LS QP+ NW G TG++
Sbjct: 296 RRLKTKRKMSFWYGARSKREMFYVEDFDMLAAENDNFQWHVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLFENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKNLGVEDENIL 401
>gi|27378789|ref|NP_770318.1| oxidoreductase [Bradyrhizobium japonicum USDA 110]
gi|27351938|dbj|BAC48943.1| blr3678 [Bradyrhizobium japonicum USDA 110]
Length = 346
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 171 VLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIV 228
+++ GSG+SP+ S++ SS E VR +YGAR + Y D F E + V
Sbjct: 213 MILVGGGSGMSPLWSILHDHISSGEVRPVRFFYGARTQNDLFYLDHFAELAAKHPEFTFV 272
Query: 229 PVLSQ--PDGNWSGETGYVQAAFSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVS 285
PVLS D W G G+V A + + + V CG M E +T ++ V
Sbjct: 273 PVLSHAADDTAWGGAKGFVHEAVGEHLRGADYGEDVDVYACGPSPMIEALTPVLQMSDVE 332
Query: 286 SEKIL 290
S++I
Sbjct: 333 SDRIF 337
>gi|386309584|ref|YP_006005640.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418241384|ref|ZP_12867913.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
gi|318604542|emb|CBY26040.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica Y11]
gi|351779185|gb|EHB21303.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVIISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|257228925|gb|ACV52974.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFIGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIQHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>gi|194698944|gb|ACF83556.1| unknown [Zea mays]
Length = 368
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 182 VKGVCSNFLCDLKPGAEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 237
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 238 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 296
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I+L
Sbjct: 297 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIML 340
>gi|392536439|ref|ZP_10283576.1| ferredoxin--NADP reductase [Pseudoalteromonas arctica A 37-1-2]
Length = 247
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 26/245 (10%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W + + +E+LF ++++ + P +AGQ+ +L ++D K IA S
Sbjct: 4 WVEATVKSVIWWSETLFSLTVNANVEP------FKAGQFTKLSIMDGDK----RIARAYS 53
Query: 116 FASA--SGAFEF-LVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVL 172
+ +A + EF L+ + G + L L+ G+ V I Q F +D I D+ +
Sbjct: 54 YVNAPENPDLEFYLINVIDGLLSPRLATLQPGETVLIEQHATGFFTLDEIPQSDQ---LW 110
Query: 173 IFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW---ESSGVKIVP 229
+ TG+ I P S+++ K+ + L +G R ++YQ E + +P
Sbjct: 111 MLGTGTAIGPFLSILQQPDVWKKYKSINLVHGVRFNNDLSYQALINELLRVYPEQLNYIP 170
Query: 230 VLSQPDGNWSGETGYVQAA------FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEG 283
V+S+ + G +G + A F K P ++CG QM ++ T+++L +
Sbjct: 171 VVSREEP-LQGLSGRITNAIESNGLFEHVKLTPEPSNAQFMICGNPQMVKDTTALLLDKN 229
Query: 284 VSSEK 288
+ +
Sbjct: 230 FTRNR 234
>gi|120600026|ref|YP_964600.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. W3-18-1]
gi|146292049|ref|YP_001182473.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
putrefaciens CN-32]
gi|386312718|ref|YP_006008883.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella putrefaciens
200]
gi|120560119|gb|ABM26046.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. W3-18-1]
gi|145563739|gb|ABP74674.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella putrefaciens
CN-32]
gi|319425343|gb|ADV53417.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella putrefaciens
200]
Length = 418
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|375134088|ref|YP_004994738.1| phenol 2-monooxygenase [Acinetobacter calcoaceticus PHEA-2]
gi|39931048|sp|Q7WTJ2.3|DMPP_ACICP RecName: Full=Phenol hydroxylase P5 protein; AltName: Full=Phenol
2-monooxygenase P5 component
gi|31407694|emb|CAD92316.1| phenol hydroxylase component [Acinetobacter calcoaceticus]
gi|154366343|gb|ABS81297.1| phenol hydroxylase component [Acinetobacter calcoaceticus PHEA-2]
gi|325121533|gb|ADY81056.1| phenol 2-monooxygenase [Acinetobacter calcoaceticus PHEA-2]
Length = 353
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|254467451|ref|ZP_05080861.1| NADH:ubiquinone oxidoreductase, F subunit [Rhodobacterales
bacterium Y4I]
gi|206684452|gb|EDZ44935.1| NADH:ubiquinone oxidoreductase, F subunit [Rhodobacterales
bacterium Y4I]
Length = 406
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D E V I G+G++P+RS I
Sbjct: 240 AGKMSSYIFNLKPGDEVTISGPFGEFFARDT-----EKEMVFI-GGGAGMAPMRSHIFDQ 293
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+ K M + + F + E+ + LS QP +W G TG++
Sbjct: 294 LKRLKTNRKISFWYGARSKKEMFFVEDFDQLAAENPNFEWHVALSDPQPGDDWEGYTGFI 353
Query: 246 QAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 354 HNVLYEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIM 400
>gi|162458489|ref|NP_001104851.1| ferredoxin [Zea mays]
gi|6561891|dbj|BAA88237.1| ferredoxin [Zea mays]
gi|414878634|tpg|DAA55765.1| TPA: ferredoxin--NADP reductase, leaf isozyme [Zea mays]
gi|414878635|tpg|DAA55766.1| TPA: ferredoxin--NADP reductase, leaf isozyme [Zea mays]
Length = 368
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 182 VKGVCSNFLCDLKPGAEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 237
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 238 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 296
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I+L
Sbjct: 297 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIML 340
>gi|117919392|ref|YP_868584.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. ANA-3]
gi|117611724|gb|ABK47178.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. ANA-3]
Length = 418
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|51595242|ref|YP_069433.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pseudotuberculosis IP 32953]
gi|186894260|ref|YP_001871372.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pseudotuberculosis PB1/+]
gi|81640251|sp|Q66E01.1|NQRF_YERPS RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|51588524|emb|CAH20132.1| NADH-uniquinone oxidoreductase subunit F [Yersinia
pseudotuberculosis IP 32953]
gi|186697286|gb|ACC87915.1| NADH:ubiquinone oxidoreductase, subunit F [Yersinia
pseudotuberculosis PB1/+]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|322417567|ref|YP_004196790.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Geobacter sp. M18]
gi|322420733|ref|YP_004199956.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Geobacter sp. M18]
gi|320123954|gb|ADW11514.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter sp.
M18]
gi|320127120|gb|ADW14680.1| oxidoreductase FAD/NAD(P)-binding domain protein [Geobacter sp.
M18]
Length = 280
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
RAGQ+ + G+ TF IAS P+ G E +SV G E L L+ GD V +
Sbjct: 44 RAGQFAEYSSFGFGESTF-CIASAPT---RKGYIECCFRSV-GRVTESLRRLEVGDTVGV 98
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKER-SDVRLYYGARN 207
G F ++ Y L+F A G + P+R++I + +++ D+ + YGAR+
Sbjct: 99 RGPYGNSFPIEEF-----YGKSLVFIAGGIALPPLRTVIWNCLDLRDKFKDITIVYGARS 153
Query: 208 LKRMAYQDKFKEW-ESSGVKIVPVLSQPDGN---WSGETGYVQAAFSRAKKIFNPQGTGV 263
+ Y+ + EW E V++V + P GN + G+ G+V A + + T
Sbjct: 154 EADLVYKHELAEWQERDDVRLVKCV-DPGGNGPDFDGKVGFVPNVLEEAAP--SSENTIA 210
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEKI 289
++CG M + ++ G S + I
Sbjct: 211 LVCGPPIMIKFTLPVLERLGFSDDAI 236
>gi|260432895|ref|ZP_05786866.1| oxidoreductase FAD/NAD [Silicibacter lacuscaerulensis ITI-1157]
gi|260416723|gb|EEX09982.1| oxidoreductase FAD/NAD [Silicibacter lacuscaerulensis ITI-1157]
Length = 393
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG-V 225
+ P + + A G GI+P+ ++ + + V L YG R ++ D+ E +G +
Sbjct: 261 DAPGIAMIAGGVGIAPMLGILNELRARNDPRPVTLVYGNRAASQIVDGDRLAAMEQAGHL 320
Query: 226 KIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV-VLCGQKQMAEEVTSIVLAEGV 284
++V VLS+P +W+GE G + + R + + T V VLCG +M V +LA V
Sbjct: 321 RLVHVLSEPPQDWTGEVGLIDSDLLRRTFDDDQRSTWVFVLCGPPKMLSAVRKDLLAMKV 380
Query: 285 SSEKILKN 292
S+ +IL
Sbjct: 381 SARQILSE 388
>gi|222546862|gb|ACM66936.1| phenolhydroxylase component [Arthrobacter sp. W1]
Length = 353
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L+V + +IA+PPS A G + V+ V G T + L+ G +
Sbjct: 133 QAGQYINLQVPSIDSTRAFSIANPPSMA---GIIDLHVRKVEGGAGTTWLHDELEVGQSL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++S G+ F ++ D + I A GSG+S S+I + + L+ GARN
Sbjct: 190 DVSGPYGQFF----VRKSDPQGAIFI-AGGSGLSSPESMIMDLLEEGDTRPIYLFQGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + D F + + +P L+ P+ W G G+V A + F + +G
Sbjct: 245 KAELYHADHFYQLAEKHDNFHYIPALNAPLPEDAWEGFVGFVHEAVG---QFFEQRCSGN 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M E S ++
Sbjct: 302 KAYLCGPPPMIEAAISTLM 320
>gi|295131934|ref|YP_003582610.1| PaaE-like NADH oxidoreductase [Zunongwangia profunda SM-A87]
gi|294979949|gb|ADF50414.1| PaaE-like NADH oxidoreductase [Zunongwangia profunda SM-A87]
Length = 348
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLA--IASPPSFASASGAFEFLVKSVAGSTAEVLCG--LKKGD 145
+AGQY+ ++ GK A + S P+ S F+ VK V G VL L+ GD
Sbjct: 37 KAGQYITIKADVDGKELRRAYSLCSAPN----SEEFKVTVKEVEGGKFSVLANNSLQAGD 92
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++E+ G+ ++P T FA GSGI+P+ S+I++ S + +S L YG
Sbjct: 93 ILEVHPPEGKFV----LEPSTSAKTYAAFAAGSGITPVLSIIKTVLSEESKSRFILTYGN 148
Query: 206 RNLKRMAYQDKFKEWESSG-----VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
++ + + + E +++ V+ V ++ D G F K +
Sbjct: 149 KSPEDTIFFKELLELQAAYPDRLFVEFVFSRAREDNAHFGRIETSTVNFVMKNKFKDQPF 208
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
V LCG ++M V+ ++ G++ E I
Sbjct: 209 DAVYLCGPEEMINHVSEVLTNNGIAEENI 237
>gi|18310519|ref|NP_562453.1| anaerobic sulfite reductase subunit B [Clostridium perfringens str.
13]
gi|422346203|ref|ZP_16427117.1| sulfite reductase, subunit B [Clostridium perfringens WAL-14572]
gi|18145199|dbj|BAB81243.1| anaerobic sulfite reductase subunit B [Clostridium perfringens str.
13]
gi|373226825|gb|EHP49147.1| sulfite reductase, subunit B [Clostridium perfringens WAL-14572]
Length = 263
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKPGDKISLRGAYGKGWPVEQFKDKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGLVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV EKI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVPEEKIWVSF 225
>gi|238787927|ref|ZP_04631723.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
frederiksenii ATCC 33641]
gi|238723875|gb|EEQ15519.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
frederiksenii ATCC 33641]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENENFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|406833671|ref|ZP_11093265.1| putative NiFe hydrogenase gamma subunit [Schlesneria paludicola DSM
18645]
Length = 285
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
VAG+ +L L GD + + G G+ +D++ D +++ A G G++P+R LI
Sbjct: 84 VAGNVTRMLAKLAVGDTLGVRGPFGTGWPLDQLVGND----IIVVAGGLGLAPLRPLIYY 139
Query: 190 GFSSKER-SDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAA 248
S + + L GAR+ + Y+ + W + + + + +WSG+ G V
Sbjct: 140 LISHRNLFQKIWLICGARDSAGLLYRQELPLWRQKRIDVQLTVDRATPDWSGQIGVVTQL 199
Query: 249 FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
R PQ T +V CG + M + + L G+ + +I
Sbjct: 200 IDRLHLDL-PQKTHLVACGPEVMMKYAAASGLRLGLDASRI 239
>gi|357052598|ref|ZP_09113704.1| sulfite reductase [Clostridium clostridioforme 2_1_49FAA]
gi|355386604|gb|EHG33642.1| sulfite reductase [Clostridium clostridioforme 2_1_49FAA]
Length = 263
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLCGL 141
DI SH GQ+LQL + VG+ +P S +S G +F ++SV T E+
Sbjct: 30 DIRPSH---GQFLQLSIPKVGE-------APISVSSFGDGWMDFTIRSVGKVTDEIF-EK 78
Query: 142 KKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVR 200
+ GD++ + G+G+ V+R Q +++ G+G++P++S++ ++ ++ V
Sbjct: 79 QPGDILFLRGAYGKGWPVERFQGKH----MVVITGGTGLAPVKSMLNMFWNQEDFVKSVH 134
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
L G +N + +++ + W+ I + + W ETG+V +
Sbjct: 135 LISGFKNEDGIIFRNDLERWKEKFTTIYALDTDHKDGW--ETGFVTEFVPGIPFKDFGED 192
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VV+ G M + VL +GV EKI +F
Sbjct: 193 YSVVVVGPPPMMKFTGLEVLNQGVPEEKIWMSF 225
>gi|238764555|ref|ZP_04625502.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
kristensenii ATCC 33638]
gi|238697257|gb|EEP90027.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
kristensenii ATCC 33638]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|113969285|ref|YP_733078.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. MR-4]
gi|114046485|ref|YP_737035.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. MR-7]
gi|113883969|gb|ABI38021.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. MR-4]
gi|113887927|gb|ABI41978.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. MR-7]
Length = 418
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKDHEAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|406872483|gb|EKD22980.1| hypothetical protein ACD_83C00129G0001 [uncultured bacterium]
Length = 236
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Query: 116 FASASGAFE----FLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
FA AS E F+ K + L LK +E++ G + +IQ + P V
Sbjct: 57 FAIASSPLEKNLLFITKMTHSLFKQKLDNLKINGTLEVAGPYG----IFKIQENAQVPAV 112
Query: 172 LIFATGSGISPIRSLIESGFSSKERS---DVRLYYGARNLKRMAYQDKFKEWESSGVKIV 228
I A G GI+P RS++ + K+R + L++ ++ +++ + F + + V
Sbjct: 113 FI-AGGVGIAPFRSMV---INDKDRDFPHRITLFFSNKDSQKVPFHYTFSNISHAHFQYV 168
Query: 229 PVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
P +S +W GE G + + K I N L G KQM E + ++L GVS++
Sbjct: 169 PTISGQTTDWQGEVGRINRQMIQ-KYILNFTEPIYYLAGPKQMVESMKKMILGLGVSADH 227
Query: 289 I 289
I
Sbjct: 228 I 228
>gi|167855548|ref|ZP_02478310.1| thiamin transporter membrane protein [Haemophilus parasuis 29755]
gi|219871275|ref|YP_002475650.1| Na(+)-translocating NADH-quinone reductase subunit F [Haemophilus
parasuis SH0165]
gi|167853349|gb|EDS24601.1| thiamin transporter membrane protein [Haemophilus parasuis 29755]
gi|219691479|gb|ACL32702.1| Na(+)-translocating NADH-quinone reductase subunit F [Haemophilus
parasuis SH0165]
Length = 410
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 245 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 298
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ K LS QP NW G TG++
Sbjct: 299 KRLKSKRKMTFWYGARSKREMFYVEDFDSLQAENDNFKWYVALSDPQPGDNWDGYTGFIH 358
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 359 NVLYENYLKDHEAPEDCEYYMCGPPIMNASVIKMLKDLGVEDENIL 404
>gi|50422207|ref|XP_459666.1| DEHA2E08228p [Debaryomyces hansenii CBS767]
gi|74602095|sp|Q6BQ54.1|MCR1_DEBHA RecName: Full=NADH-cytochrome b5 reductase 2; AltName:
Full=Mitochondrial cytochrome b reductase
gi|49655334|emb|CAG87900.1| DEHA2E08228p [Debaryomyces hansenii CBS767]
Length = 299
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 112 SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S G+ EF++K G + + LK D + +G V P++Y +
Sbjct: 106 TPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAF-----KGPVVKWKWEPNQYKS 160
Query: 171 VLIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVK 226
+ + G+GI+P+ L+ E + ++++ V L+YG K + + D E V
Sbjct: 161 IALIGGGTGITPLYQLMHEITKNPEDKTKVNLFYGNLTEKDILIKKELDTIAEKHKDQVN 220
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+V L + NW+GETGY+ F ++K + V +CG
Sbjct: 221 VVYFLDKAPENWNGETGYISKEFLQSKLPGPGKDNKVFVCG 261
>gi|251780778|ref|ZP_04823698.1| putative oxidoreductase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243085093|gb|EES50983.1| putative oxidoreductase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 384
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 170 TVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKI 227
++ A GSGI+P S+I+ S ++ L YG +N K + ++ KE+ S + +
Sbjct: 154 NLIFLAGGSGITPFISMIKEVLDSGLDRNINLIYGIKNEKSAIFLEELKEFNSRHNNFNL 213
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
V S+P +++GE+G++ + +K+ N +G +CG + M + + + GV +
Sbjct: 214 TLVASEPQDDYTGESGFITGDLIK-RKVTNINSSGFYICGPQVMYDFCRKELKSLGVKNS 272
Query: 288 KI 289
KI
Sbjct: 273 KI 274
>gi|124266319|ref|YP_001020323.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Methylibium
petroleiphilum PM1]
gi|124259094|gb|ABM94088.1| putative oxidoreductase [Methylibium petroleiphilum PM1]
Length = 341
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 24/194 (12%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + ++ ++A+ P A+ E ++ + G T V +K+ D++
Sbjct: 133 HAGQYIEFILRDGARRSY-SMANAPH--RAAEGLELHLRHMPGGKFTDHVFGAMKEKDIL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F + P +++ A+G+G +PI+++IE S D LY+G R+
Sbjct: 190 RMEGPFGSFFLREESSRP-----IVLLASGTGFAPIKAIIEHMQSKGIARDTVLYWGCRS 244
Query: 208 LKRMAYQDKFKEW------ESSGVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQ 259
+ D W + ++ VPVLS+ P+ W G TG+V A + +
Sbjct: 245 QADLYLHD----WALQAATDMPNLRYVPVLSEPRPEDAWMGRTGFVHQAL--MADLPDLS 298
Query: 260 GTGVVLCGQKQMAE 273
G V CG M +
Sbjct: 299 GHEVYACGAPVMVD 312
>gi|22124863|ref|NP_668286.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis KIM10+]
gi|45440548|ref|NP_992087.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Microtus str. 91001]
gi|108808716|ref|YP_652632.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Antiqua]
gi|108811025|ref|YP_646792.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Nepal516]
gi|145600121|ref|YP_001164197.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Pestoides F]
gi|149364922|ref|ZP_01886957.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis CA88-4125]
gi|153949744|ref|YP_001402121.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pseudotuberculosis IP 31758]
gi|162418955|ref|YP_001607657.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Angola]
gi|165926559|ref|ZP_02222391.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165935847|ref|ZP_02224417.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. IP275]
gi|166011074|ref|ZP_02231972.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166213020|ref|ZP_02239055.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167398639|ref|ZP_02304163.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421646|ref|ZP_02313399.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423431|ref|ZP_02315184.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167467182|ref|ZP_02331886.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis FV-1]
gi|170025517|ref|YP_001722022.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pseudotuberculosis YPIII]
gi|218930262|ref|YP_002348137.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis CO92]
gi|229838841|ref|ZP_04459000.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229896007|ref|ZP_04511177.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Pestoides A]
gi|229899410|ref|ZP_04514553.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901247|ref|ZP_04516369.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Nepal516]
gi|270489437|ref|ZP_06206511.1| NADH:ubiquinone oxidoreductase, F subunit [Yersinia pestis KIM D27]
gi|294504951|ref|YP_003569013.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Z176003]
gi|384123419|ref|YP_005506039.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis D106004]
gi|384127275|ref|YP_005509889.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis D182038]
gi|384138927|ref|YP_005521629.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis A1122]
gi|384415919|ref|YP_005625281.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420548309|ref|ZP_15046129.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-01]
gi|420553656|ref|ZP_15050902.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-02]
gi|420559260|ref|ZP_15055776.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-03]
gi|420564650|ref|ZP_15060611.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-04]
gi|420569697|ref|ZP_15065195.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-05]
gi|420575355|ref|ZP_15070316.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-06]
gi|420580662|ref|ZP_15075141.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-07]
gi|420586019|ref|ZP_15079995.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-08]
gi|420591134|ref|ZP_15084592.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-09]
gi|420596516|ref|ZP_15089433.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-10]
gi|420602194|ref|ZP_15094485.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-11]
gi|420607613|ref|ZP_15099384.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-12]
gi|420612988|ref|ZP_15104202.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-13]
gi|420618387|ref|ZP_15108908.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-14]
gi|420623677|ref|ZP_15113678.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-15]
gi|420628765|ref|ZP_15118295.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-16]
gi|420633886|ref|ZP_15122883.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-19]
gi|420644568|ref|ZP_15132566.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-29]
gi|420649850|ref|ZP_15137339.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-32]
gi|420655487|ref|ZP_15142404.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-34]
gi|420660993|ref|ZP_15147333.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-36]
gi|420666269|ref|ZP_15152081.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-42]
gi|420671128|ref|ZP_15156510.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-45]
gi|420676489|ref|ZP_15161384.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-46]
gi|420682115|ref|ZP_15166465.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-47]
gi|420687449|ref|ZP_15171205.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-48]
gi|420692673|ref|ZP_15175791.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-52]
gi|420698440|ref|ZP_15180862.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-53]
gi|420704271|ref|ZP_15185494.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-54]
gi|420709620|ref|ZP_15190251.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-55]
gi|420715088|ref|ZP_15195108.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-56]
gi|420720600|ref|ZP_15199833.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-58]
gi|420726067|ref|ZP_15204647.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-59]
gi|420731649|ref|ZP_15209664.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-60]
gi|420736668|ref|ZP_15214198.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-61]
gi|420742144|ref|ZP_15219119.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-63]
gi|420747874|ref|ZP_15223962.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-64]
gi|420753300|ref|ZP_15228810.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-65]
gi|420759095|ref|ZP_15233468.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-66]
gi|420774563|ref|ZP_15247290.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-76]
gi|420780183|ref|ZP_15252237.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-88]
gi|420785781|ref|ZP_15257127.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-89]
gi|420790917|ref|ZP_15261745.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-90]
gi|420796441|ref|ZP_15266710.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-91]
gi|420801507|ref|ZP_15271261.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-92]
gi|420806856|ref|ZP_15276107.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-93]
gi|420812212|ref|ZP_15280916.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-94]
gi|420817726|ref|ZP_15285900.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-95]
gi|420823042|ref|ZP_15290668.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-96]
gi|420828121|ref|ZP_15295234.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-98]
gi|420833812|ref|ZP_15300374.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-99]
gi|420838672|ref|ZP_15304765.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-100]
gi|420843867|ref|ZP_15309481.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-101]
gi|420849529|ref|ZP_15314563.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-102]
gi|420860387|ref|ZP_15323934.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-113]
gi|421764733|ref|ZP_16201521.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis INS]
gi|23821897|sp|Q8ZBZ5.1|NQRF_YERPE RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|122979450|sp|Q1C4D5.1|NQRF_YERPA RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|122980289|sp|Q1CLD8.1|NQRF_YERPN RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|189030480|sp|A7FLJ3.1|NQRF_YERP3 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|189030481|sp|A4TPL2.1|NQRF_YERPP RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|21957694|gb|AAM84537.1|AE013698_11 Na-translocating NADH ubiquinone oxidoreductase, beta chain
[Yersinia pestis KIM10+]
gi|45435405|gb|AAS60964.1| NADH-uniquinone oxidoreductase subunit F [Yersinia pestis biovar
Microtus str. 91001]
gi|108774673|gb|ABG17192.1| NADH-uniquinone oxidoreductase subunit F [Yersinia pestis Nepal516]
gi|108780629|gb|ABG14687.1| NADH-uniquinone oxidoreductase subunit F [Yersinia pestis Antiqua]
gi|115348873|emb|CAL21829.1| NADH-uniquinone oxidoreductase subunit F [Yersinia pestis CO92]
gi|145211817|gb|ABP41224.1| NADH-uniquinone oxidoreductase subunit F [Yersinia pestis Pestoides
F]
gi|149291335|gb|EDM41409.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis CA88-4125]
gi|152961239|gb|ABS48700.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pseudotuberculosis IP 31758]
gi|162351770|gb|ABX85718.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis Angola]
gi|165915992|gb|EDR34599.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. IP275]
gi|165921487|gb|EDR38684.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165990074|gb|EDR42375.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166205807|gb|EDR50287.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166960565|gb|EDR56586.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051143|gb|EDR62551.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057601|gb|EDR67347.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169752051|gb|ACA69569.1| NADH:ubiquinone oxidoreductase, subunit F [Yersinia
pseudotuberculosis YPIII]
gi|229681176|gb|EEO77270.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Nepal516]
gi|229687812|gb|EEO79885.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Orientalis str. India 195]
gi|229695207|gb|EEO85254.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229700930|gb|EEO88959.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Pestoides A]
gi|262363015|gb|ACY59736.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis D106004]
gi|262366939|gb|ACY63496.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis D182038]
gi|270337941|gb|EFA48718.1| NADH:ubiquinone oxidoreductase, F subunit [Yersinia pestis KIM D27]
gi|294355410|gb|ADE65751.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis Z176003]
gi|320016423|gb|ADV99994.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|342854056|gb|AEL72609.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis A1122]
gi|391423301|gb|EIQ85800.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-01]
gi|391423505|gb|EIQ85980.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-02]
gi|391423735|gb|EIQ86191.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-03]
gi|391438206|gb|EIQ98986.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-04]
gi|391439341|gb|EIR00007.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-05]
gi|391443098|gb|EIR03446.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-06]
gi|391455210|gb|EIR14349.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-07]
gi|391456079|gb|EIR15139.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-08]
gi|391457893|gb|EIR16798.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-09]
gi|391470970|gb|EIR28574.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-10]
gi|391472307|gb|EIR29778.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-11]
gi|391473330|gb|EIR30718.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-12]
gi|391487056|gb|EIR43032.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-13]
gi|391488603|gb|EIR44430.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-15]
gi|391488650|gb|EIR44472.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-14]
gi|391503036|gb|EIR57273.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-16]
gi|391503204|gb|EIR57418.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-19]
gi|391519012|gb|EIR71684.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-29]
gi|391520504|gb|EIR73052.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-34]
gi|391521426|gb|EIR73892.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-32]
gi|391533416|gb|EIR84690.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-36]
gi|391536523|gb|EIR87499.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-42]
gi|391538955|gb|EIR89712.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-45]
gi|391551946|gb|EIS01411.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-46]
gi|391552083|gb|EIS01536.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-47]
gi|391552559|gb|EIS01974.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-48]
gi|391566761|gb|EIS14710.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-52]
gi|391567920|gb|EIS15722.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-53]
gi|391572442|gb|EIS19674.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-54]
gi|391581276|gb|EIS27178.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-55]
gi|391583353|gb|EIS29019.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-56]
gi|391593904|gb|EIS38145.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-58]
gi|391596891|gb|EIS40767.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-60]
gi|391598063|gb|EIS41829.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-59]
gi|391611340|gb|EIS53529.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-61]
gi|391611825|gb|EIS53961.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-63]
gi|391614571|gb|EIS56421.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-64]
gi|391624540|gb|EIS65163.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-65]
gi|391628970|gb|EIS68962.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-66]
gi|391647233|gb|EIS84885.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-76]
gi|391650783|gb|EIS88032.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-88]
gi|391655176|gb|EIS91943.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-89]
gi|391660131|gb|EIS96320.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-90]
gi|391667694|gb|EIT02994.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-91]
gi|391677181|gb|EIT11510.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-93]
gi|391677932|gb|EIT12198.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-92]
gi|391678424|gb|EIT12637.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-94]
gi|391691155|gb|EIT24106.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-95]
gi|391694094|gb|EIT26789.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-96]
gi|391695772|gb|EIT28318.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-98]
gi|391708028|gb|EIT39321.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-99]
gi|391711359|gb|EIT42331.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-100]
gi|391712254|gb|EIT43151.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-101]
gi|391724094|gb|EIT53706.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-102]
gi|391727484|gb|EIT56695.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit [Yersinia
pestis PY-113]
gi|411174284|gb|EKS44317.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
pestis INS]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|420855053|ref|ZP_15319239.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
partial [Yersinia pestis PY-103]
gi|391725165|gb|EIT54656.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
partial [Yersinia pestis PY-103]
Length = 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 76 PCKLDSIEFIGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 128
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 129 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 181
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 182 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 237
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 238 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 292
Query: 288 KILKN 292
K +
Sbjct: 293 KFFSD 297
>gi|332284679|ref|YP_004416590.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Pusillimonas sp. T7-7]
gi|330428632|gb|AEC19966.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Pusillimonas sp. T7-7]
Length = 344
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG----LKKG 144
AGQYL+ + D GK ++A+PP+ S E ++ G T V +K
Sbjct: 134 AGQYLEFILKD-GKRRSYSMATPPA---ESNLVELHIRHTPGGLFTDHVFAAGETQMKVR 189
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
+++ + G F D P ++ A+G+G +PI++++E LY+G
Sbjct: 190 EILRVEGPFGSFFLRDDSNKP-----LVFLASGTGFAPIKAIVERMVQEGITRPAVLYWG 244
Query: 205 ARNLKRMAYQDKFKEWES--SGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + Q++ ++WE + + +PV+S Q + W+G TG+V A + I +
Sbjct: 245 GRRPADLYMQEQARQWEQDLADFRFIPVISDAQAEDAWTGRTGFVHQAV--MQDIPDLSA 302
Query: 261 TGVVLCGQKQMAEEVTSIVLAEG 283
V CG M + + +G
Sbjct: 303 YQVYACGAPVMVDRARKDFIHQG 325
>gi|254490169|ref|ZP_05103360.1| NADH:ubiquinone oxidoreductase, F subunit [Methylophaga thiooxidans
DMS010]
gi|224464655|gb|EEF80913.1| NADH:ubiquinone oxidoreductase, F subunit [Methylophaga thiooxydans
DMS010]
Length = 405
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I F
Sbjct: 240 GQMSSYIFNLKPGDKVTISGPFGEFFAKDTDKE------MIFIGGGAGMAPMRSHI---F 290
Query: 192 SSKERSD----VRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETG 243
R + + +YGAR+L+ M Y + F E E+ LS P + NW G TG
Sbjct: 291 DQLRRLNSSRKMTFWYGARSLREMFYTEDFDELAAENDNFTWNVALSDPLPEDNWEGYTG 350
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ + + P+ +CG M V +++ GV E IL
Sbjct: 351 FIHNVLYDNYLQNHAAPEDCEFYICGPPMMNAAVINMLEDLGVERENIL 399
>gi|468471|dbj|BAA06019.1| one component of phenol hydroxylase [Pseudomonas putida]
Length = 353
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
L ++SP + L H+ +D +AGQY+ L + + ++A+PPS +
Sbjct: 112 LVDLSPTIKGL-HIKLD-------RPMPFQAGQYVNLALPGIDGTRAFSLANPPS---RN 160
Query: 121 GAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E V+ V G +T + LK GD VE+S G+ F D Q D ++ A GS
Sbjct: 161 DEVELHVRLVEGGAATGFIHKQLKVGDAVELSGPYGQFFVRDS-QAGD----LIFIAGGS 215
Query: 179 GISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
G+S +S+I + ER D R L+ GARN + + F+E + VP L+Q
Sbjct: 216 GLSSPQSMI---LNLLERGDTRRITLFQGARNRAELYNCELFEELAARHPNFSYVPALNQ 272
Query: 234 --PDGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
D W G G+V A AK F+ + G LCG M + + ++
Sbjct: 273 ANDDPEWQGFKGFVHDA---AKAHFDGRFGGQKAYLCGPPPMIDAAITTLM 320
>gi|332160669|ref|YP_004297246.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325664899|gb|ADZ41543.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330862513|emb|CBX72670.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
enterocolitica W22703]
Length = 407
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVIISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>gi|397733921|ref|ZP_10500633.1| phenol hydroxylase P5 protein [Rhodococcus sp. JVH1]
gi|396930215|gb|EJI97412.1| phenol hydroxylase P5 protein [Rhodococcus sp. JVH1]
Length = 342
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS EF V++ AG A + L GD +
Sbjct: 134 AGQYAELIVPGSGVARQYSMANPPS---EQRLLEFHVRNTAGGLATEGWIFDSLAVGDRI 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ V+ E P +LI G+G++P++S++ + LY+G R
Sbjct: 191 DLRGPLGQFGVVES----REEPAILI-GGGTGLAPLKSIVRHALDHDLLPAIHLYHGGRR 245
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ E++ + PVLS+ NW G TG V A + +G L
Sbjct: 246 EADLYDVECFRAMEATDSRFHYHPVLSEE--NWDGATGMVTDAV--LGDFASCRGHSAYL 301
Query: 266 CGQKQM 271
CG M
Sbjct: 302 CGPPAM 307
>gi|375258361|ref|YP_005017531.1| FMN reductase [Klebsiella oxytoca KCTC 1686]
gi|397655302|ref|YP_006496004.1| NAD(P)H-flavin reductase [Klebsiella oxytoca E718]
gi|365907839|gb|AEX03292.1| FMN reductase [Klebsiella oxytoca KCTC 1686]
gi|394344027|gb|AFN30148.1| NAD(P)H-flavin reductase [Klebsiella oxytoca E718]
Length = 233
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS----FASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
RAGQYL + + + K F ++AS PS GA E + ++A V+ + K
Sbjct: 32 RAGQYLMVVMDERDKRPF-SMASTPSEQEFIELHIGASELNLYAMA-----VMDRILKER 85
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E+ G + ++ +E P +LI A G+G S +RS++ + + D+ +Y+G
Sbjct: 86 QIEVDMPHGEAW----LRDDEERPLILI-AGGTGFSYVRSILLTALARNPNRDIAIYWGG 140
Query: 206 RNLKRMAYQDKFK--EWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT-- 261
R K + + + + G+++ PV+ QPD W G TG V A + GT
Sbjct: 141 REAKHLYDLAELEALSLQHPGLRVEPVVEQPDAEWRGRTGTVLTA------VLQDYGTLG 194
Query: 262 --GVVLCGQKQMAE 273
+ + G+ +MA+
Sbjct: 195 EHDIYIAGRFEMAK 208
>gi|256681309|gb|ACV05022.1| phenol hydroxylase component [Pseudomonas aeruginosa]
Length = 262
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L + + ++A+PPS A E ++ V G +T + LK GD V
Sbjct: 70 QAGQYINLTLPGIEGSRAFSLANPPSQADE---VELHIRLVEGGAATGFIHRQLKVGDAV 126
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYG 204
E+S G+ F D + ++ A GSG+S +S+I ER D R L+ G
Sbjct: 127 ELSGPYGQFFVRDS-----QAGDLIFIAGGSGLSSPQSMI---LDLLERGDTRRITLFQG 178
Query: 205 ARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGN--WSGETGYVQAAFSRAKKIFNPQ- 259
ARN+ + ++ F+ + VP L+Q + + W G G+V A AK F+ +
Sbjct: 179 ARNVAELYNRELFEALAAQHPHFSYVPALNQANDDPAWQGFKGFVHDA---AKAHFDGRF 235
Query: 260 -GTGVVLCGQKQMAEEVTSIVL 280
G LCG M + + ++
Sbjct: 236 GGQKAYLCGPPPMIDAAITTLM 257
>gi|148241859|ref|YP_001227016.1| ferredoxin-NADP oxidoreductase [Synechococcus sp. RCC307]
gi|147850169|emb|CAK27663.1| Ferredoxin-NADP oxidoreductase [Synechococcus sp. RCC307]
Length = 388
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+ + G+ + LC ++ G V+I+ +G+ + + P DE V++ ATG+GI+P+R+ +
Sbjct: 197 EQIYGTCSTFLCDIEPGAKVKITGPVGK----EMLLPEDEEANVIMLATGTGIAPMRTYL 252
Query: 188 ESGFSSKERS--------DVRLYYGARNLKRMAYQDKFKEWE---SSGVKIVPVLSQPDG 236
F KER L+ GA + Y + F+ +E S + +S+
Sbjct: 253 RRMFEDKEREANGWKFRGKAWLFMGAPKTANLLYDEDFQRYESEYSDNFRYTKAISREQQ 312
Query: 237 NWSGETGYVQAAFSR-AKKIF----NPQGTGVVLCGQKQM 271
N G Y+Q + A +IF +P+ T V +CG + M
Sbjct: 313 NPKGGRMYIQDRVTEYADEIFAMIEDPK-THVYMCGLRGM 351
>gi|91782275|ref|YP_557481.1| p-cymene monooxygenase, reductase subunit(CymAb) [Burkholderia
xenovorans LB400]
gi|91686229|gb|ABE29429.1| xylene monooxygenase electron transfer component [Burkholderia
xenovorans LB400]
Length = 349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 21/234 (8%)
Query: 67 AAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL 126
A E L H + ++ D A S+ AGQY LR G+ + A+ P + EF
Sbjct: 121 ATEPLTHDILRVTVQTDRAVSYA-AGQYANLRKAGGGRARSYSFANAPQRKGRT-LLEFY 178
Query: 127 VKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIR 184
++ V G T + G KG +E+ +G ++ D + ++ A GSG++P+
Sbjct: 179 IRKVPGGEFTESLFGGELKGVSLEMEAPLG----TFHLRAGDSH--MVCIAGGSGLAPLV 232
Query: 185 SLIESGFSSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQP--DGNW 238
S++E ++ + D L +GAR + D W+ + +PVLS D +W
Sbjct: 233 SILEHARGNRIKRDCTLLFGARTQADLYQLDAIGSIASNWQGD-FRFIPVLSDEPLDSDW 291
Query: 239 SGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G G V + F G G LCG M + + + G+ EK+ +
Sbjct: 292 KGARGLVTDHIAPG---FCEGGEG-YLCGPPLMIDAAIASLAKHGIPLEKVFYD 341
>gi|384568036|ref|ZP_10015140.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora glauca K62]
gi|384523890|gb|EIF01086.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Saccharomonospora glauca K62]
Length = 393
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + + +P SP + A G+ EF V++V G + ++ + GDV
Sbjct: 192 RAGQYVSVEIPQ--RPRLWRALSPANAPRADGSLEFHVRAVEGGWVSRAIVGHTQPGDVW 249
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
MGR +VDR + VL+ A G+GI+P++++++ E L YGAR+
Sbjct: 250 TFGAPMGR-MSVDR----ESGRPVLMVAGGTGIAPLQAILDDLGRWVENPRTTLLYGARH 304
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP-QGTGVV 264
+ D+ + +S + + PV+ E G + A SR + P + ++
Sbjct: 305 WDDLYALDQLYSFSTSNPWLTVWPVVEDASSAPDVEQGTLAEAVSR----WGPWEDHDIL 360
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ G M E + +L G +I +
Sbjct: 361 VSGPPAMIEATVTALLRAGTHPSQICYD 388
>gi|237654380|ref|YP_002890694.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Thauera sp. MZ1T]
gi|237625627|gb|ACR02317.1| oxidoreductase FAD/NAD(P)-binding domain protein [Thauera sp. MZ1T]
Length = 337
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P + ++ AE + + + + + + A RAGQY+ + + D + +F +IA+ P A
Sbjct: 104 PCRVQKLERLAEDVMRIELKLPASENFA---FRAGQYIDILLADGQRRSF-SIANAPHDA 159
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
E V+ + G T V + + +++ +G F ++ P VL+ A
Sbjct: 160 RH---LELHVRRIDGGRFTGHVFETMMEKEILRFEGPLGSFF----LREDSARPIVLV-A 211
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQ 233
G+G +PI+ ++E + + LY+GAR + + WE G++ VPVLS
Sbjct: 212 GGTGFAPIKGIVEHAIRLGLQRPITLYWGARRRDGLYLDALARAWEEVLPGLRYVPVLS- 270
Query: 234 PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
D W+G G V A + + V +CG M +
Sbjct: 271 -DEAWAGRGGLVHQAV--LEDFADLSAHEVYVCGAPAMVD 307
>gi|409407413|ref|ZP_11255864.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Herbaspirillum sp. GW103]
gi|386433164|gb|EIJ45990.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Herbaspirillum sp. GW103]
Length = 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ L + D G+ ++A+ S E V+ + G T + G++ G
Sbjct: 149 RAGQYIDLLLED-GQRRSYSMATHAR--DGSDLLELHVRHLPGGLFTDRLFNGMQPGQPF 205
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F + +P V++ A+G+G +P+++L+E ++ +RLY+G R
Sbjct: 206 SLEGPAGSFFMREGREP------VILLASGTGFAPVKALVEEAIATGSTRAMRLYWGGRR 259
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDG--NWSGETGYVQAA 248
+ ++W +S VPVLS+ D W+G TG V A
Sbjct: 260 AADLYLDALCRDWAASLPWFDYVPVLSEADAASGWNGRTGLVHQA 304
>gi|325266488|ref|ZP_08133165.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella denitrificans
ATCC 33394]
gi|324981931|gb|EGC17566.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Kingella denitrificans
ATCC 33394]
Length = 335
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCG-LKKGDV 146
+GQY+++ + D G ++ +IA+ P SG EF V+ G + ++ G LKKG +
Sbjct: 132 HSGQYMEILLKD-GSRSY-SIANAPH---ESGTLEFHVRLREGGLFSPQLFDGRLKKGSI 186
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ + +G + + + +L+ ATG+G +PI+S+++ ++ V +Y+GAR
Sbjct: 187 IRVRGPLGSFY----LNEDGAHKPLLLLATGTGFAPIKSILQHLAHTQPNRRVHIYHGAR 242
Query: 207 NLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKK------IFN 257
+ Y + + + + PVLS PD W+G TG + K ++
Sbjct: 243 TAAGL-YDEAALQQLLAQLPNARYTPVLSNPDEGWTGATGRITEHILNDYKDLSDYEVYA 301
Query: 258 PQGTGVVL 265
TG+VL
Sbjct: 302 CGSTGMVL 309
>gi|168206763|ref|ZP_02632768.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens E
str. JGS1987]
gi|169342884|ref|ZP_02863915.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens C
str. JGS1495]
gi|169299141|gb|EDS81213.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens C
str. JGS1495]
gi|170661809|gb|EDT14492.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens E
str. JGS1987]
Length = 263
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKPGDKISLRGAYGKGWPVEQFKNKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGLVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV EKI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVPEEKIWVSF 225
>gi|153212393|ref|ZP_01948175.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124116601|gb|EAY35421.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 662
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G ++
Sbjct: 369 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTIL 425
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 426 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 480
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 481 EQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQGRL--SLSHIKRIPNLVSRQVFV 538
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 539 CGPDGFMQKAKNLLLKQGVA 558
>gi|152997101|ref|YP_001341936.1| phenylacetate-CoA oxygenase/reductase subunit PaaK [Marinomonas sp.
MWYL1]
gi|150838025|gb|ABR72001.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit [Marinomonas
sp. MWYL1]
Length = 357
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 80 DAP-DIASS-HTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA----FEFLVKSVAGS 133
D P D+A S H + GQYL LR G+ S++ SG +K V
Sbjct: 25 DIPGDLAQSYHFKQGQYLTLRTQIDGQEV------RRSYSICSGVQDNEMRVAIKRVPDG 78
Query: 134 TAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
+K GDV+E+ +G ++ P + L+ A GSGI+PI S+ ++
Sbjct: 79 LFSTFANDSIKVGDVLEVMPPLGHFYSE---LDPSRHGDYLLVAAGSGITPILSIAKTTL 135
Query: 192 SSKERSDVRLYYGARNLKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAA 248
+++ S V L YG R+ ++D+ + +++ + ++ VLS+ + G++
Sbjct: 136 ATEPYSKVTLLYGNRSTSSTMFRDQLADLKNTYMDRLNLIFVLSREQQDIDLYNGHIDEE 195
Query: 249 FSRA--KKIFNPQG-TGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
RA ++ N + TG +CG + M E V I+ G E I
Sbjct: 196 KCRALFERWVNVKALTGAFICGPQAMTETVKDILKEAGAPEENI 239
>gi|398867294|ref|ZP_10622759.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Pseudomonas sp. GM78]
gi|398237576|gb|EJN23327.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Pseudomonas sp. GM78]
Length = 353
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
T L ++SP + + H+ +D A +AGQY+ L++ V ++A+ P A
Sbjct: 110 TRLVDLSPTIKGV-HLKLDRPMA-------FQAGQYINLQLPGVEGTRAFSLANTPRQAD 161
Query: 119 ASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
E V+ V G +T+ + L GD VE+S G+ F V Q D ++ A
Sbjct: 162 E---VELHVRRVDGGLATSMIHDELHVGDAVELSGPYGQ-FFVRTSQSGD----LIFIAG 213
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQ- 233
GSG+S +S+I + + + L+ GARN + + F+E E + VP LSQ
Sbjct: 214 GSGLSSPQSMILDLLETGDTRQIVLFQGARNRAELYNRGLFEELEREFTNFTYVPALSQA 273
Query: 234 -PDGNWSGETGYVQAAFSRAKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
D W+G GYV A AK+ F + + LCG M + + ++
Sbjct: 274 ADDEEWTGFKGYVHDA---AKQHFEGRFSNRKAYLCGPPVMIDSAINCLM 320
>gi|374995371|ref|YP_004970870.1| 2-polyprenylphenol 6-hydroxylase [Desulfosporosinus orientis DSM
765]
gi|357213737|gb|AET68355.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Desulfosporosinus orientis DSM 765]
Length = 280
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
+++ + D + GQ+ +L G+ F IA+ P+ G +F V V G
Sbjct: 29 TLEFMNKQDEENFKYMPGQFAELSAYGHGEAPF-GIATSPT---EPGILKFSVAKV-GCV 83
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
+ L +++G +V + MG + +++ + + V+I G + +RSL + K
Sbjct: 84 SNALHLMEEGTMVGVRGPMGNYYPIEKFKGKN----VVIIGGGFAFTTLRSLAKYMLDDK 139
Query: 195 ERSD---VRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYV 245
R D + + YGARN + Y+++ EWE++ + +V + +P W+ G++
Sbjct: 140 HRGDYGDITVIYGARNPGLLLYKEELAEWENNPNINLVTTIDRPAEGWTKHVGFI 194
>gi|410631102|ref|ZP_11341783.1| phenol hydroxylase P5 protein [Glaciecola arctica BSs20135]
gi|410149304|dbj|GAC18650.1| phenol hydroxylase P5 protein [Glaciecola arctica BSs20135]
Length = 352
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVV 147
+AGQY+ L V +IA+PPS E V+ V +T + LK GD +
Sbjct: 133 QAGQYINLNVPGCDGARAFSIANPPSNGQE---IELHVRQVPSGSATGYIHEKLKVGDSL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F V R QP + ++ A GSG+S +S+I ++ + L+ GARN
Sbjct: 190 PLSGPYGQ-FFVRRSQPGN----LIFIAGGSGLSSPQSMILDLLEKGDKRHITLFQGARN 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAA 248
+ D F + + + +P L+ + D NW G G+V A
Sbjct: 245 QDELYNADLFAALAKKHTNLTYIPALNDAEDDENWKGFKGFVHEA 289
>gi|227818979|ref|YP_002822950.1| oxidoreductase [Sinorhizobium fredii NGR234]
gi|227337978|gb|ACP22197.1| putative oxidoreductase [Sinorhizobium fredii NGR234]
Length = 347
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 91 AGQYLQLRVVDVGKPTF-LAIASPPSFASASGAFEFLVKSVAGSTA--EVLCGLKKGDVV 147
AGQY QL G PT ++A+ P EF ++ + A V L GD V
Sbjct: 135 AGQYAQLSFP--GAPTRDYSMANRP----GERELEFHIRRIPNGAASERVASTLAVGDEV 188
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F R P +L A GSG++P+++++++ + R + LY+G R
Sbjct: 189 TVRGPFGSAFLRQRHTGP-----ILAIAGGSGMAPMKAIVDTALNQGFRQPIHLYFGVRE 243
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D F+ + +PVLSQ TG V A A+ + + G +
Sbjct: 244 ERDLYLVDHFRTLCQHHPNLSFIPVLSQIQQCAGYRTGMVTRAI--AEDLQDLDGWQAYM 301
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
G M + T I+L G+ E +
Sbjct: 302 AGPPAMTDSATPILLECGLRPENL 325
>gi|22124974|ref|NP_668397.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis KIM10+]
gi|45440663|ref|NP_992202.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Microtus str. 91001]
gi|108808600|ref|YP_652516.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Antiqua]
gi|108811138|ref|YP_646905.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Nepal516]
gi|145600011|ref|YP_001164087.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Pestoides F]
gi|149365035|ref|ZP_01887070.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
CA88-4125]
gi|162420435|ref|YP_001607277.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Angola]
gi|165927623|ref|ZP_02223455.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165935906|ref|ZP_02224476.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011115|ref|ZP_02232013.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167399620|ref|ZP_02305144.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167422748|ref|ZP_02314501.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423182|ref|ZP_02314935.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468909|ref|ZP_02333613.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis FV-1]
gi|170025409|ref|YP_001721914.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis YPIII]
gi|218930149|ref|YP_002348024.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis CO92]
gi|229838714|ref|ZP_04458873.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896129|ref|ZP_04511299.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Pestoides A]
gi|229899282|ref|ZP_04514425.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901370|ref|ZP_04516492.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Nepal516]
gi|294504855|ref|YP_003568917.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Z176003]
gi|384123323|ref|YP_005505943.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis D106004]
gi|384127176|ref|YP_005509790.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis D182038]
gi|384139041|ref|YP_005521743.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis A1122]
gi|420548152|ref|ZP_15045982.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-01]
gi|420553516|ref|ZP_15050775.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-02]
gi|420564513|ref|ZP_15060486.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-04]
gi|420569557|ref|ZP_15065067.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-05]
gi|420575214|ref|ZP_15070186.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-06]
gi|420580537|ref|ZP_15075024.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-07]
gi|420585885|ref|ZP_15079869.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-08]
gi|420590998|ref|ZP_15084467.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-09]
gi|420596386|ref|ZP_15089314.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-10]
gi|420602040|ref|ZP_15094346.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-11]
gi|420607482|ref|ZP_15099260.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-12]
gi|420612869|ref|ZP_15104095.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-13]
gi|420623545|ref|ZP_15113556.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-15]
gi|420628632|ref|ZP_15118171.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-16]
gi|420633761|ref|ZP_15122764.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-19]
gi|420638950|ref|ZP_15127443.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-25]
gi|420644421|ref|ZP_15132426.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-29]
gi|420649702|ref|ZP_15137207.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-32]
gi|420655356|ref|ZP_15142284.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-34]
gi|420660854|ref|ZP_15147211.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-36]
gi|420666147|ref|ZP_15151972.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-42]
gi|420671015|ref|ZP_15156403.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-45]
gi|420676360|ref|ZP_15161264.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-46]
gi|420681975|ref|ZP_15166339.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-47]
gi|420687307|ref|ZP_15171076.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-48]
gi|420692529|ref|ZP_15175663.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-52]
gi|420698294|ref|ZP_15180734.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-53]
gi|420709483|ref|ZP_15190123.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-55]
gi|420714941|ref|ZP_15194979.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-56]
gi|420725931|ref|ZP_15204524.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-59]
gi|420731488|ref|ZP_15209513.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-60]
gi|420736536|ref|ZP_15214077.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-61]
gi|420742017|ref|ZP_15219000.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-63]
gi|420747725|ref|ZP_15223833.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-64]
gi|420753172|ref|ZP_15228689.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-65]
gi|420764208|ref|ZP_15237955.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-71]
gi|420769445|ref|ZP_15242654.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-72]
gi|420774425|ref|ZP_15247165.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-76]
gi|420780047|ref|ZP_15252113.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-88]
gi|420785637|ref|ZP_15257002.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-89]
gi|420796311|ref|ZP_15266588.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-91]
gi|420801363|ref|ZP_15271132.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-92]
gi|420806722|ref|ZP_15275983.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-93]
gi|420812079|ref|ZP_15280795.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-94]
gi|420817597|ref|ZP_15285777.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-95]
gi|420822906|ref|ZP_15290543.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-96]
gi|420827990|ref|ZP_15295111.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-98]
gi|420833681|ref|ZP_15300255.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-99]
gi|420838547|ref|ZP_15304647.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-100]
gi|420843734|ref|ZP_15309357.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-101]
gi|420849392|ref|ZP_15314439.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-102]
gi|420860252|ref|ZP_15323811.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-113]
gi|421764620|ref|ZP_16201408.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis INS]
gi|56404992|sp|P68641.2|ASCD_YERPE RecName: Full=CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase
reductase; AltName: Full=CDP-6-deoxy-delta-3,4-glucoseen
reductase; Short=E3
gi|21957817|gb|AAM84648.1|AE013710_3 putative CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
KIM10+]
gi|155495|gb|AAB49398.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
gi|456128|gb|AAA16760.1| CDP-6-deoxy-3,4-glucoseen reductase [Yersinia pseudotuberculosis]
gi|609640|gb|AAA88698.1| AscD [Yersinia pseudotuberculosis]
gi|6580732|emb|CAB63270.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis]
gi|45435521|gb|AAS61079.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Microtus str. 91001]
gi|108774786|gb|ABG17305.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Nepal516]
gi|108780513|gb|ABG14571.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Antiqua]
gi|115348760|emb|CAL21712.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis CO92]
gi|145211707|gb|ABP41114.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Pestoides F]
gi|149291448|gb|EDM41522.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
CA88-4125]
gi|162353250|gb|ABX87198.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Angola]
gi|165916051|gb|EDR34658.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920377|gb|EDR37654.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990115|gb|EDR42416.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166958339|gb|EDR55360.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167052124|gb|EDR63532.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057352|gb|EDR67098.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169751943|gb|ACA69461.1| oxidoreductase FAD/NAD(P)-binding domain protein [Yersinia
pseudotuberculosis YPIII]
gi|229681299|gb|EEO77393.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Nepal516]
gi|229687684|gb|EEO79757.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695080|gb|EEO85127.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701052|gb|EEO89081.1| cdp-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis
Pestoides A]
gi|262362919|gb|ACY59640.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis D106004]
gi|262366840|gb|ACY63397.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis D182038]
gi|294355314|gb|ADE65655.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis Z176003]
gi|298161988|gb|ADI59438.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
gi|342854170|gb|AEL72723.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis A1122]
gi|391423602|gb|EIQ86069.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-01]
gi|391424158|gb|EIQ86571.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-02]
gi|391438505|gb|EIQ99245.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-04]
gi|391439679|gb|EIR00309.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-05]
gi|391443512|gb|EIR03824.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-06]
gi|391455433|gb|EIR14551.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-07]
gi|391456310|gb|EIR15350.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-08]
gi|391458316|gb|EIR17189.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-09]
gi|391471248|gb|EIR28828.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-10]
gi|391472702|gb|EIR30136.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-11]
gi|391473552|gb|EIR30921.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-12]
gi|391487365|gb|EIR43308.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-13]
gi|391488852|gb|EIR44652.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-15]
gi|391503268|gb|EIR57477.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-16]
gi|391503507|gb|EIR57701.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-19]
gi|391508819|gb|EIR62520.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-25]
gi|391519247|gb|EIR71897.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-29]
gi|391520965|gb|EIR73477.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-34]
gi|391522073|gb|EIR74491.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-32]
gi|391534063|gb|EIR85291.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-36]
gi|391536932|gb|EIR87870.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-42]
gi|391539262|gb|EIR90000.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-45]
gi|391552278|gb|EIS01719.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-46]
gi|391552609|gb|EIS02019.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-47]
gi|391553071|gb|EIS02442.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-48]
gi|391567114|gb|EIS15019.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-52]
gi|391568281|gb|EIS16029.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-53]
gi|391581524|gb|EIS27398.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-55]
gi|391583864|gb|EIS29475.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-56]
gi|391597235|gb|EIS41079.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-60]
gi|391598393|gb|EIS42117.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-59]
gi|391611672|gb|EIS53825.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-61]
gi|391612147|gb|EIS54254.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-63]
gi|391615243|gb|EIS57030.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-64]
gi|391624726|gb|EIS65326.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-65]
gi|391635513|gb|EIS74667.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-71]
gi|391637537|gb|EIS76446.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-72]
gi|391647513|gb|EIS85135.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-76]
gi|391651176|gb|EIS88387.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-88]
gi|391655682|gb|EIS92394.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-89]
gi|391668008|gb|EIT03283.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-91]
gi|391677535|gb|EIT11833.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-93]
gi|391678375|gb|EIT12594.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-92]
gi|391678908|gb|EIT13086.1| oxidoreductase FAD-binding domain protein [Yersinia pestis PY-94]
gi|391691418|gb|EIT24350.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-95]
gi|391694423|gb|EIT27083.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-96]
gi|391696125|gb|EIT28646.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-98]
gi|391708154|gb|EIT39435.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-99]
gi|391711635|gb|EIT42584.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-100]
gi|391712547|gb|EIT43415.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-101]
gi|391724342|gb|EIT53928.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-102]
gi|391727694|gb|EIT56879.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Yersinia pestis PY-113]
gi|411174171|gb|EKS44204.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia pestis INS]
Length = 329
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFIGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>gi|355676717|ref|ZP_09060213.1| sulfite reductase, subunit B [Clostridium citroniae WAL-17108]
gi|354813306|gb|EHE97917.1| sulfite reductase, subunit B [Clostridium citroniae WAL-17108]
Length = 263
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLCGL 141
DI H GQ+LQL + +G+ +P S +S G +F ++SV G +V+
Sbjct: 30 DIKPEH---GQFLQLSIPKIGE-------APISVSSFGEGYMDFTIRSV-GKVTDVIFEK 78
Query: 142 KKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVR 200
K GD++ + G+G+ +D+ + +++ G+G++P++S++ + + + V
Sbjct: 79 KAGDILFLRGAYGKGWPIDQFKGKH----MVVITGGTGLAPVKSMLNMFYDNPDLVKSVH 134
Query: 201 LYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
L G +N + + ++ + W I + W ETG+V SR +
Sbjct: 135 LISGFKNEEGIIFKGDLERWSRRFDTIYALDKDRKDGW--ETGFVTEFVSRIPFKDLGED 192
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
VV+ G M + VL +GV EKI +F
Sbjct: 193 YAVVVVGPPPMMKFTGFEVLKQGVPEEKIWMSF 225
>gi|226939358|ref|YP_002794431.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Laribacter hongkongensis
HLHK9]
gi|226714284|gb|ACO73422.1| UbiB [Laribacter hongkongensis HLHK9]
Length = 341
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAE-VLCGLKKGDVV 147
RAGQY+ + + D GK ++A+ P E ++ + GS +E V +K+ +++
Sbjct: 131 RAGQYIDILMKD-GKARSFSLANAPH---DDALLELHIRHMPGGSFSEYVFTQMKEKEIL 186
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+G F +D D V++ A+G+G +P++ ++E + LY+GAR
Sbjct: 187 RFKGPLG-SFHLDE----DSSRPVILLASGTGFAPVKGIVEHAVHVGNSRPMVLYWGARQ 241
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDG--NWSGETGYVQAA 248
+ + ++W E VPVLS+P NW+G +G V A
Sbjct: 242 RNDLYMYELAEQWARELPWFSFVPVLSEPAAADNWTGRSGLVHQA 286
>gi|153828047|ref|ZP_01980714.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148876456|gb|EDL74591.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 662
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G ++
Sbjct: 369 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTIL 425
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 426 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 480
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 481 EQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQGRL--SLSHIKRIPNLVSRQVFV 538
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 539 CGPDGFMQKAKNLLLKQGVA 558
>gi|170727737|ref|YP_001761763.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
woodyi ATCC 51908]
gi|169813084|gb|ACA87668.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella woodyi ATCC
51908]
Length = 405
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F D ++ G+G++P+RS I +
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFFV------KDTDAEMVFIGGGAGMAPMRSHIFNQL 293
Query: 192 S-SKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
K + + +YGAR+ + + YQ+ F + + V LS P+ NW G TG++
Sbjct: 294 KGEKTQRKMSFWYGARSTREVFYQEDFDKLAAENDNFVWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ + GV E IL
Sbjct: 354 NVLYENYLKNHKAPEDCEFYMCGPPIMNSSVISMLESLGVEEENIL 399
>gi|305665758|ref|YP_003862045.1| Phenylacetate-CoA oxygenase/reductase, PaaK subunit [Maribacter sp.
HTCC2170]
gi|88710522|gb|EAR02754.1| Phenylacetate-CoA oxygenase/reductase, PaaK subunit [Maribacter sp.
HTCC2170]
Length = 351
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV--AGSTAEVLCGLKKGDVVEI 149
GQY+ ++ GK L A S +S VK V G +A LK+GDV+E+
Sbjct: 39 GQYITIKKEVNGKE--LRRAYSISSSSKRDYLTIGVKKVDKGGFSAYANTNLKEGDVLEV 96
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR-NL 208
GR F R DE + FA GSGI+PI S+++S +S + L YG + N
Sbjct: 97 MPPEGR-FIFKR---ADEPKNIAAFAAGSGITPIMSILKSVLTSNTSNKFVLVYGNKSNA 152
Query: 209 KRMAYQDKFK-EWESSG---VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ M Y++ K + E + V +Q +G+ G ++ K + Q
Sbjct: 153 ETMFYKELVKLQLEYANRFFVYFTNSKTQEEGSLFGRIDTSTVNYALKNKHKDTQFDAFY 212
Query: 265 LCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG + M V++ + G++ EKI
Sbjct: 213 LCGPEDMIHLVSNTLQENGINKEKI 237
>gi|37521864|ref|NP_925241.1| ferredoxin-NADP reductase [Gloeobacter violaceus PCC 7421]
gi|35212863|dbj|BAC90236.1| ferredoxin--NADP+ reductase [Gloeobacter violaceus PCC 7421]
Length = 296
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + +C L GD V I+ G+ F + P D +++ ATG+GI+P R+ +
Sbjct: 114 VRGVASNFICDLAPGDDVSITGPTGKTFLL----PEDPSTNLVLIATGTGIAPFRAFLRR 169
Query: 190 GFSSKE---RSDVRLYYGARNLKRMAYQDKFKEWESSG-VKIVPVLSQPDGNWSGETGYV 245
+ + + V L++G +N YQD+ + + G +IV +S+ N G YV
Sbjct: 170 IYDEMDTPWQGKVWLFFGMQNSNSYLYQDELAGYTAKGDFEIVEAISREQKNAQGGRMYV 229
Query: 246 QAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
Q + ++ + T +CG K M + + A + + + K++
Sbjct: 230 QHRIAEHAAALWELISGGNTYTYICGLKGMEDGIDDAFTAAAAAKDTVWKDY 281
>gi|383936928|ref|ZP_09990345.1| NAD(P)H-flavin reductase [Rheinheimera nanhaiensis E407-8]
gi|383701983|dbj|GAB60436.1| NAD(P)H-flavin reductase [Rheinheimera nanhaiensis E407-8]
Length = 235
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
+GQYLQL + D K F +IAS P V S A + +
Sbjct: 33 SGQYLQLCLTDSDKRPF-SIASIPGAKQLELHIGGSVNDQYASQALAHLLQQYQLQQPVL 91
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
+G G A + + E P +L+ A G+G S + S+ +S ++K V +Y+G R
Sbjct: 92 AEIGLGQA--QFRADSERPVILV-AGGTGFSYVYSIAQSIAAAKLDQPVFVYWGVREQSA 148
Query: 211 MAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQ 268
+ + ++W + S + +PV+ QPD NW G TG V A + + + + + G
Sbjct: 149 LYHASVMQQWAAQHSKYRFIPVVQQPDTNWQGRTGMVHQAV--LEDFISLEAYDIYVAGP 206
Query: 269 KQMAEEVTSIVLAEGVSSEKILKN 292
MA V + +G E + +
Sbjct: 207 FAMAGVVRDAFIEQGAHREHMYAD 230
>gi|427930672|pdb|3VO1|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
gi|427930673|pdb|3VO1|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Ii
Length = 314
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 128 VKGVCSNFLCDLKPGAEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 183
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 184 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 242
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I+L
Sbjct: 243 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIML 286
>gi|384219844|ref|YP_005611010.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
gi|354958743|dbj|BAL11422.1| oxidoreductase [Bradyrhizobium japonicum USDA 6]
Length = 346
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
AGQY VD+ P AI S A++ G + L + GD+ +
Sbjct: 138 AGQY-----VDITLPGPEAITRSFSMANSPGESQKLAFIIKKYPNGRFSSRLDGDLAVGT 192
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
+V +G + ++ +++ GSG+SP+ S++ SS E VR +YGAR
Sbjct: 193 EVAIKGPYGTCFRRENKTGAMILVGGGSGMSPLWSILHDHISSGEVRPVRFFYGARTQND 252
Query: 211 MAYQDKFKEWESSG--VKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFN-PQGTGVVL 265
+ Y + F E + VPVLS D W G G+V A + + + V
Sbjct: 253 LFYLEHFAELAAKHPEFTFVPVLSHAADDTAWGGAKGFVHEAVGEHLRGADYGEDVDVYA 312
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKIL 290
CG M E +T ++ V S++I
Sbjct: 313 CGPSPMIEALTPVLQMSDVESDRIF 337
>gi|24372495|ref|NP_716537.1| Na-translocating NADH-quinone reductase subunit F NqrF [Shewanella
oneidensis MR-1]
gi|24346492|gb|AAN53982.1| Na-translocating NADH-quinone reductase subunit F NqrF [Shewanella
oneidensis MR-1]
Length = 405
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F D ++ G+G++P+RS I
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFFV------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
SK+ + + +YGAR+ + + YQ F + V LS+ P+ NW+G TG++
Sbjct: 294 KSKKTKRKMSFWYGARSTREVFYQQDFDTLAAENDNFVWHVALSEPLPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 354 NVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|384917201|ref|ZP_10017332.1| 2-polyprenylphenol hydroxylase or related flavodoxin oxidoreductase
[Methylacidiphilum fumariolicum SolV]
gi|384525460|emb|CCG93205.1| 2-polyprenylphenol hydroxylase or related flavodoxin oxidoreductase
[Methylacidiphilum fumariolicum SolV]
Length = 287
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 20/204 (9%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ+L + V VG+ L+IA + V+SV GS V+ K+GD++ +
Sbjct: 52 GQFLMVYVFGVGEVA-LSIADN---GGDQEKYLLTVRSV-GSVTRVIEHAKEGDILGVRG 106
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS---DVRLYYGARNL 208
G G+ + D +L+ A G G+ P+ S I F + RS + L YG R
Sbjct: 107 PFGNGWPIQEASTKD----ILLIAGGIGLPPLWSTIP--FFVQNRSCYGRISLLYGVRTP 160
Query: 209 KRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Y+DK + + VKI L+ W+G G V S A+ F+P T V +
Sbjct: 161 QDILYKDKLETLSNGKDISVKIAVELATAR-TWNGHIGNVLNLISHAQ--FSPPSTIVFV 217
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG + M +L G++ E I
Sbjct: 218 CGPEPMMRFCAYTLLKYGIAKENI 241
>gi|429743736|ref|ZP_19277277.1| NADH:ubiquinone oxidoreductase, F subunit [Neisseria sp. oral taxon
020 str. F0370]
gi|429164696|gb|EKY06809.1| NADH:ubiquinone oxidoreductase, F subunit [Neisseria sp. oral taxon
020 str. F0370]
Length = 405
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQP--DGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + E+ + LS P + NW G TG++
Sbjct: 294 KRLKSKRKISFWYGARSKREMFYVEDFDGLQAENDNFQWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVLYENYLKNHEAPEDCEFYMCGPPVMNQAVIKMLKDLGVEDENIL 399
>gi|420720454|ref|ZP_15199708.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
partial [Yersinia pestis PY-58]
gi|391594171|gb|EIS38363.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase,
partial [Yersinia pestis PY-58]
Length = 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 90 PCKLDSIEFIGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 142
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 143 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 195
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 196 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 251
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 252 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 306
Query: 288 KILKN 292
K +
Sbjct: 307 KFFSD 311
>gi|375110149|ref|ZP_09756383.1| FMN reductase [Alishewanella jeotgali KCTC 22429]
gi|374569776|gb|EHR40925.1| FMN reductase [Alishewanella jeotgali KCTC 22429]
Length = 235
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST------AEVLCGLKKGD 145
GQYLQL + + K F +IAS P A E + + AG + +G
Sbjct: 34 GQYLQLCLTENDKRPF-SIASIP----AQDLLELHIGAPAGDNWSSAALQHLQQAFAQGL 88
Query: 146 VVEISQVMGR-GFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
V++ +G G+ D +P V++ A G+G S + S+ + ++ + V LY+G
Sbjct: 89 SVQVEVGLGHAGWRQDSARP------VILLAGGTGFSYVHSIAMALAAASQDKPVFLYWG 142
Query: 205 ARNLKRMAYQDKFKEWESSGV--KIVPVLSQPDGNWSGETGYVQAA 248
R + YQ + ++W ++ + +PV+ +P NW G +G V A
Sbjct: 143 VRQEDALYYQAELQQWAAANANYRFIPVVQEPGANWQGRSGLVHEA 188
>gi|88861257|ref|ZP_01135889.1| NAD(P)H-flavin reductase [Pseudoalteromonas tunicata D2]
gi|88816738|gb|EAR26561.1| NAD(P)H-flavin reductase [Pseudoalteromonas tunicata D2]
Length = 237
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
ISP E +F V + + A + +AGQYLQ+ + + K F +IAS PS +
Sbjct: 11 ISPLTEFIFKVELKPAQAAEF-----KAGQYLQVVLGEKDKRAF-SIASKPS---QTDLL 61
Query: 124 EFLVKS--VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGIS 181
E + + G + L L+ + G V ++ P +L+ A G+G S
Sbjct: 62 ELHIGAGVADGYARQALDHLRSHHAAGTQANLEVGLGVSELREQSSRPIILL-AGGTGFS 120
Query: 182 PIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWS 239
++S+ + + V Y+G ++ + D+ K W +S +PV+ P +W
Sbjct: 121 YVKSMADHLQEAGCDRPVFFYWGVKDSSALYADDEMKAWAASNPHFNYIPVIENPAADWQ 180
Query: 240 GETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
G +GYV A K + + + G+ M V + +G E++ +
Sbjct: 181 GHSGYVHLAV--LKDFVSLVDYDIYMAGRFDMIGIVRDDFINQGAIREQMYAD 231
>gi|381159003|ref|ZP_09868236.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Thiorhodovibrio sp. 970]
gi|380880361|gb|EIC22452.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Thiorhodovibrio sp. 970]
Length = 406
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + GLK GD V +S G FA D ++ G+G++P+RS I F
Sbjct: 241 GIMSSYIFGLKPGDRVTVSGPFGEFFA------KDTQAEMIFVGGGAGMAPMRSHI---F 291
Query: 192 SSKERSD----VRLYYGARNLKRMAYQDKFK----EWESSGVKIVPVLSQPDGNWSGETG 243
+R D + +YGAR+ + + YQ F E+ I QP+ NW G TG
Sbjct: 292 DQLKRLDSQRKISFWYGARSKREIFYQQDFDGLAAAHENFSWHIALSDPQPEDNWQGSTG 351
Query: 244 YVQAAFSRAKKIFN--------PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
++ K +F+ P+ +CG M V ++ GV + I L NF
Sbjct: 352 FIH------KVLFDEYLSEHPAPEDCEYYMCGPPMMTAAVIGMLKNLGVEDDNILLDNF 404
>gi|315125947|ref|YP_004067950.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas sp. SM9913]
gi|315014461|gb|ADT67799.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas sp. SM9913]
Length = 407
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA D ++ G+G++P+RS I
Sbjct: 241 CGKMSSYIWSLKEGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYV 245
+ + +YGAR+ + M Y + F V LS QP+ NW G TG++
Sbjct: 295 LKRLNSKRKISFWYGARSKREMFYVEDFDGLAEQNDNFVWHTALSDPQPEDNWEGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ GV E IL
Sbjct: 355 HNVLFENYLKDHEAPEDCEFYMCGPPMMNAAVISMLKDLGVEEENIL 401
>gi|194703462|gb|ACF85815.1| unknown [Zea mays]
gi|413951269|gb|AFW83918.1| ferredoxin--NADP reductase, leaf isozyme [Zea mays]
Length = 369
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D TV++ ATG+GI+P RS +
Sbjct: 183 VKGVCSNFLCDLKPGADVKITGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFLWK 238
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 239 MF-LEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 297
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + + ++ T V +CG K M + + I+L
Sbjct: 298 EKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGIDDIML 341
>gi|153824752|ref|ZP_01977419.1| flavodoxin reductase [Vibrio cholerae MZO-2]
gi|149741708|gb|EDM55737.1| flavodoxin reductase [Vibrio cholerae MZO-2]
Length = 605
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G ++
Sbjct: 312 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTIL 368
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 369 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 423
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 424 EQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQGRL--SLSHIKRIPNLVSRQVFV 481
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 482 CGPDGFMQKAKNLLLKQGVA 501
>gi|406877357|gb|EKD26607.1| hypothetical protein ACD_79C01098G0002 [uncultured bacterium]
Length = 274
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 110 IASPPSFASASGAFEFLVKSVA----GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPP 165
I P S AS+S + E++ +A G + LK GD + +S F + + P
Sbjct: 68 IKKPYSVASSSKSKEYVEFHIALVRSGVMTPRIFNLKVGDKIWLSNQFRGIFTLQDV--P 125
Query: 166 DEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW----- 220
E +LI ATG+G+SP S+I + ++ + + GAR+ + Y +
Sbjct: 126 KESHLILI-ATGTGLSPYMSMIRTIITADMNRKMTVIQGARHSWDLGYSSELFTLTKICK 184
Query: 221 ESSGVKIVPVLSQPDGNWSGETGYVQAAF--SRAKKIF----NPQGTGVVLCGQKQMAEE 274
E + + I+ + W GETG++ + ++ +K++ NP T + LCG M +
Sbjct: 185 EFNYIPIISLTENEPYKWKGETGFIHDYWNANKIEKLWGFKPNPSNTHIFLCGHPMMLQA 244
Query: 275 VTSIVLAEG 283
+ I+ EG
Sbjct: 245 MLEILGLEG 253
>gi|352093644|ref|ZP_08954815.1| Ferredoxin--NADP(+) reductase [Synechococcus sp. WH 8016]
gi|351679984|gb|EHA63116.1| Ferredoxin--NADP(+) reductase [Synechococcus sp. WH 8016]
Length = 383
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E +++ G + LC ++ G V+I+ +G+ + + P DE V++ ATG+GI+P
Sbjct: 187 YEKDGETINGVCSTYLCDVEPGTKVKITGPVGK----EMLLPEDEEANVIMLATGTGIAP 242
Query: 183 IRSLIESGFSSKERSD--------VRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVL 231
+R+ + F KER++ L+ GA + Y + F +E + +
Sbjct: 243 MRTYLRRMFEPKERAENGWNFRGKAWLFMGAPKTANLLYDEDFLHYEKEYPDNFRYTKAI 302
Query: 232 SQPDGNWSGETGYVQAAFS-RAKKIF----NPQGTGVVLCGQKQM 271
S+ N G Y+Q S A++IF +P+ T V +CG + M
Sbjct: 303 SREQQNPKGGRMYIQDRVSEHAEEIFAMIEDPK-THVYMCGLRGM 346
>gi|304414107|ref|ZP_07395475.1| flavin reductase [Candidatus Regiella insecticola LSR1]
gi|304283321|gb|EFL91717.1| flavin reductase [Candidatus Regiella insecticola LSR1]
Length = 233
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS----FASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
RAGQYL + + + K F +IAS P+ GA E + ++ V+ + K
Sbjct: 32 RAGQYLMVVMSERDKRPF-SIASTPTQRQYIELHIGASELNLYAMT-----VMDAIVKNR 85
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++I G + + Q P +L+ A +G S RS++ + + + +V LY+G
Sbjct: 86 RLDIDIPHGEAWFRENSQRP-----LLLIAGSTGFSYTRSILLAALAEQPHREVSLYWGG 140
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R K + D+ K + ++IVPV+ QP NW G+TG V +A + + Q +
Sbjct: 141 REAKHLYDLDELKALMVKYPQLRIVPVVEQPADNWDGKTGTVLSAVLQDYQSLAKQ--DI 198
Query: 264 VLCGQKQMAEEVTSIVLAE 282
+ G+ +MA+ + +E
Sbjct: 199 YIAGRFEMAKIARELFCSE 217
>gi|5851794|dbj|BAA84123.1| phenol hydroxylase component [Ralstonia sp. KN1]
Length = 355
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 86/213 (40%), Gaps = 27/213 (12%)
Query: 94 YLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQ 151
YL LRV +P ++A+ P E V+ V G +T + L GD + S
Sbjct: 138 YLNLRVPGCDQPRAFSLANRP----GDDLVELHVRRVEGGQATGYLHDQLSVGDELGFSA 193
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRM 211
GR F Q P +L A GSG+S R++I ++ E + L GARN +
Sbjct: 194 PYGRFFVRKSAQKP-----MLFLAGGSGLSSPRAMILDMLAAGETLPITLVQGARNRTEL 248
Query: 212 AYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAF-----SRAKKIFNPQGTG 262
Y + F+ + + VP LS D W G GYV + A F +G
Sbjct: 249 YYDEAFRALAGAHPNFRYVPALSDEPADSGWDGARGYVHDVLHGLYANGATADF--RGHK 306
Query: 263 VVLCGQKQMAEEVTSIVL-----AEGVSSEKIL 290
LCG M E ++ E + +EK +
Sbjct: 307 AYLCGPPPMIEACIRTLMQGRLFEEDIHTEKFI 339
>gi|388567198|ref|ZP_10153635.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Hydrogenophaga sp. PBC]
gi|388265581|gb|EIK91134.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Hydrogenophaga sp. PBC]
Length = 343
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY++ + D + ++ +P + A A G E ++ + G T +V +K+ D++
Sbjct: 133 RAGQYVEFILRDGDRRSYSMANAPHTQAEAPG-LELHLRHMPGGKFTDQVFSTMKEKDIL 191
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I G F ++ + P VL+ A+G+G +PI++++E LY+G R
Sbjct: 192 RIEGPFGSFF----LREDSDKPMVLL-ASGTGFAPIKAIVEHMRFKGITRPATLYWGGRR 246
Query: 208 LKRMAYQDKFKEWESS---GVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ YQ + E + + +K VPV+S P+ W+G TG+V A
Sbjct: 247 PADL-YQSDWIEAQLAAMPNLKYVPVVSDALPEDAWTGRTGFVHHA 291
>gi|168217719|ref|ZP_02643344.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens
NCTC 8239]
gi|182380272|gb|EDT77751.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens
NCTC 8239]
Length = 263
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKPGDKISLRGAYGKGWPVEQFKNKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGIVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV EKI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVPEEKIWVSF 225
>gi|145300094|ref|YP_001142935.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
salmonicida subsp. salmonicida A449]
gi|418357862|ref|ZP_12960552.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
salmonicida subsp. salmonicida 01-B526]
gi|142852866|gb|ABO91187.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
salmonicida subsp. salmonicida A449]
gi|356689101|gb|EHI53649.1| Na(+)-translocating NADH-quinone reductase subunit F [Aeromonas
salmonicida subsp. salmonicida 01-B526]
Length = 407
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIFSLKAGDKVTISGPFGEFFA------KDTNAEMVFVGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + +YGAR+ + M Y + F E+ + LS QP+ NW G TG++
Sbjct: 296 RRLKTHRKMSFWYGARSKREMFYVEDFDMLAAENDNFQWHVALSDPQPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 NVLFENYLKNHEAPEDCEFYMCGPPVMNAAVINMLKNLGVEDENIL 401
>gi|414154440|ref|ZP_11410759.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454231|emb|CCO08663.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 277
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 56 WTPTPLA---EISPAAESLFHV-SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
+ P P+ + ++ L H + + D A R GQ+ ++ V G+ F IA
Sbjct: 5 YLPLPMKLVKNFTETSDKLIHTFTFEFLSEQDAAGFRYRPGQFAEVMVYGKGEAPF-GIA 63
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P+ G +F V V G + L L++G +V + +G + +++++ ++
Sbjct: 64 SSPT---EPGILKFSVAKV-GVVSTALHMLEEGTIVGVRGPLGNSYPLEQLKGK----SL 115
Query: 172 LIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWES-SGVKI 227
I G + +RS I+ R D + + YGARN + Y+D+ W++ S + +
Sbjct: 116 TIIGGGFAFTTLRSTIQYILDPANRGDYGDLTVIYGARNPGLLLYKDELAAWDARSDINL 175
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+ + + W+G G++ K P+ ++CG M + ++ G + +
Sbjct: 176 ITTIDRAVEGWNGRVGFIPT----VTKEVAPKSDYAIICGPPVMIKFTLPVLEECGFTPD 231
Query: 288 KIL 290
+I+
Sbjct: 232 RII 234
>gi|374263558|ref|ZP_09622106.1| phenol hydroxylase [Legionella drancourtii LLAP12]
gi|363536148|gb|EHL29594.1| phenol hydroxylase [Legionella drancourtii LLAP12]
Length = 244
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 92 GQYLQLRVVDVGK--PTFLAIASPPSFASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVE 148
GQ++ + GK +IAS P EF A G E+L LK GD++
Sbjct: 38 GQFITIHFEHEGKALKRSYSIASEPK---QDNQIEFAAGYFANGPGTELLFNLKPGDIIN 94
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI-ESGFSSKERSDVR--LYYGA 205
IS GR D + P Y ++ AT +GI+P R+++ E G ++ +++ + G
Sbjct: 95 ISGPFGRLTMKD--EQPGRY---ILIATSTGITPYRAMLTELGRRMEQNPNLQVVILQGV 149
Query: 206 RNLKRMAYQDKFKEW--ESSGVKIVPVLS-QP-DGNWSGET-GYVQAAFSRAKKIFNPQG 260
+ + + Y + F + + + +P LS QP D E GYVQ AF NPQ
Sbjct: 150 QRREEILYPNDFHAFAQKYTQATFLPYLSRQPADDLLENERPGYVQHAFPTLN--LNPQH 207
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILK 291
+ LCG M +E + + +G + ++I++
Sbjct: 208 DVIYLCGNPGMIDEAFNYLKEQGFAMQQIIR 238
>gi|319638535|ref|ZP_07993297.1| hypothetical protein HMPREF0604_00921 [Neisseria mucosa C102]
gi|317400284|gb|EFV80943.1| hypothetical protein HMPREF0604_00921 [Neisseria mucosa C102]
Length = 334
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-KSVAGSTAEVLCG----LKKGD 145
AGQY+ L + ++ +IA+ P G E + K G +E++ G +K+
Sbjct: 131 AGQYIDLLLPGNISRSY-SIANSPD---QEGILELHIRKRENGVCSEMIFGAEPKIKEKG 186
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+V + +G F + + D +++ ATG+G +PIRS++ V Y+GA
Sbjct: 187 IVRVKGPLG-AFTLQQ----DSNKPMILLATGTGYAPIRSILLDLIRQNSERQVHFYWGA 241
Query: 206 RNLKRMAYQDKFKEWES-----SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + A +E E+ K PVLS+PD W GE GYVQ A+ +
Sbjct: 242 R---QQADLYALEEVEALIGRLKNAKFSPVLSKPDSEWKGENGYVQDV--AAQNYPDLGQ 296
Query: 261 TGVVLCGQKQMAEEVTSIV 279
V CG +M E ++
Sbjct: 297 YEVYACGSPEMTESAHGLL 315
>gi|212710334|ref|ZP_03318462.1| hypothetical protein PROVALCAL_01393 [Providencia alcalifaciens DSM
30120]
gi|212687141|gb|EEB46669.1| hypothetical protein PROVALCAL_01393 [Providencia alcalifaciens DSM
30120]
Length = 240
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 111/245 (45%), Gaps = 35/245 (14%)
Query: 34 LKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQ 93
+K +R+ +ATL+ + + ++++ V I + D P H +AGQ
Sbjct: 1 MKSKRKTMATLSC-------------KVTSVESITDTVYRV-ILLPDGP----FHFKAGQ 42
Query: 94 YLQLRVVDVGKPTFLAIASPPSFASAS---GAFEFLVKSVAGSTAEVLCGLKKGDVVEIS 150
YL + + + K F ++P + S GA EF + ++A V+ + + ++I
Sbjct: 43 YLMVVMDERDKRPFSMASTPENNQSIELHIGASEFNLYAMA-----VMDRILEQQRIDID 97
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
G+ + + P +++ A G+G S S++ + + + D+ Y+G R L+
Sbjct: 98 IPHGKAWFRENSSNP-----MILIAGGTGFSYTHSILLAALAENPQRDITFYWGGRQLEH 152
Query: 211 MAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQ 268
+ + + +K++PV+ QPD NW G TG V + + + G + + G+
Sbjct: 153 LYDLGELQAISERYPNLKVIPVVEQPDENWRGRTGTVLSTV--LEDFGDLSGHDIYIAGR 210
Query: 269 KQMAE 273
+MA+
Sbjct: 211 FEMAK 215
>gi|192359425|ref|YP_001982247.1| Na(+)-translocating NADH-quinone reductase subunit F [Cellvibrio
japonicus Ueda107]
gi|190685590|gb|ACE83268.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Cellvibrio japonicus Ueda107]
Length = 407
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD + + G FA E ++F G+G++P+RS I
Sbjct: 242 GKMSSYVFSLKPGDQITVYGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + + +YGAR+L+ + Y++ + + E+ K LS QP+ NWSG TG++
Sbjct: 295 LRRLKSKRKISFWYGARSLRELFYKEDYDMLQAENENFKWHIALSDPQPEDNWSGLTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 355 HNVLYENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKSLGVEDENIL 401
>gi|402841273|ref|ZP_10889729.1| NAD(P)H-flavin reductase [Klebsiella sp. OBRC7]
gi|423105849|ref|ZP_17093550.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5242]
gi|376379710|gb|EHS92461.1| NAD(P)H-flavin reductase [Klebsiella oxytoca 10-5242]
gi|402283531|gb|EJU32043.1| NAD(P)H-flavin reductase [Klebsiella sp. OBRC7]
Length = 233
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS----FASASGAFEFLVKSVAGSTAEVLCGLKKGD 145
RAGQYL + + + K F ++AS PS GA E + ++A V+ + K
Sbjct: 32 RAGQYLMVVMDERDKRPF-SMASTPSEQEFIELHIGASELNLYAMA-----VMDRILKER 85
Query: 146 VVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
+E+ G + ++ +E P +LI A G+G S +RS++ + + D+ +Y+G
Sbjct: 86 QIEVDMPHGEAW----LRDDEERPLILI-AGGTGFSYVRSILLTALARNPNRDIAIYWGG 140
Query: 206 RNLKRMAYQDKFK--EWESSGVKIVPVLSQPDGNWSGETGYVQAA 248
R K + + + + G+++ PV+ QPD W G TG V A
Sbjct: 141 REAKHLYDLAELEALSLQHPGLRVEPVVEQPDAEWRGRTGTVLTA 185
>gi|118696|sp|P19734.3|DMPP_PSEUF RecName: Full=Phenol hydroxylase P5 protein; AltName: Full=Phenol
2-monooxygenase P5 component
gi|94993|pir||F37831 phenol 2-monooxygenase (EC 1.14.13.7) chain P5 - Pseudomonas sp.
(strain CF600)
gi|151455|gb|AAA25944.1| phenol hydroxylase [Pseudomonas putida]
Length = 353
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
L ++SP + L H+ +D +AGQY+ L + + ++A+PPS +
Sbjct: 112 LVDLSPTIKGL-HIKLD-------RPMPFQAGQYVNLALPGIDGTRAFSLANPPS---RN 160
Query: 121 GAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E V+ V G +T + LK GD VE+S G+ F D Q D ++ A GS
Sbjct: 161 DEVELHVRLVEGGAATGFIHKQLKVGDAVELSGPYGQFFVRDS-QAGD----LIFIAGGS 215
Query: 179 GISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
G+S +S+I ER D R L+ GARN + + F+E + VP L+Q
Sbjct: 216 GLSSPQSMI---LDLLERGDTRRITLFQGARNRAELYNCELFEELAARHPNFSYVPALNQ 272
Query: 234 --PDGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
D W G G+V A AK F+ + G LCG M + + ++
Sbjct: 273 ANDDPEWQGFKGFVHDA---AKAHFDGRFGGQKAYLCGPPPMIDAAITTLM 320
>gi|419761262|ref|ZP_14287518.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Thermosipho africanus H17ap60334]
gi|407513568|gb|EKF48465.1| NADH:ubiquinone oxidoreductase, na translocating, f subunit
[Thermosipho africanus H17ap60334]
Length = 367
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 28 RIPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPL---AEISPAAESLFHVSIDISDA--- 81
+P + + + + V++D + P L +++ S+ V+ DI +
Sbjct: 92 ELPYMSEEEIKENIRLSCQIKVKKDIKIQLPEELFNVKKLTGKVASIKDVTHDIKEVRIK 151
Query: 82 -PDIASSHTRAGQYLQLRV---VDVGKPTFLA--IASPPSFASASGAFEFLVKSVAG--S 133
P+ + +AGQY+Q+ V + +PT A IAS PS + L++ V G +
Sbjct: 152 LPE--EINFKAGQYVQIVVPPYDKIKQPTQRAYSIASTPS---KKDEIDLLIRLVPGGIA 206
Query: 134 TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI----ES 189
T V LK+GD E+ G + D ++ A GSG++PI+S++ E
Sbjct: 207 TTYVHNYLKEGDNFEVIGPFGEFYM------RDTDADMICVAGGSGMAPIKSIVLDMYER 260
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQP--DGNWSGETGYV 245
G +++ +V ++GAR K + Y + FK+ E S +P LS+P W+GE G +
Sbjct: 261 GITNR---NVWYFFGARTEKDLFYVELFKDLEKKWSNFHFIPALSEPMEPEKWNGEVGLI 317
Query: 246 QAAFSRAKKIFNPQGTGV--VLCGQKQMAEEVTSIVLAEGVSS 286
+ + + T LCG M ++ G+
Sbjct: 318 TDVMVKYLENVVDKNTKKEGYLCGSPGMINACEKLLNEHGIKD 360
>gi|257388771|ref|YP_003178544.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Halomicrobium mukohataei DSM 12286]
gi|257171078|gb|ACV48837.1| oxidoreductase FAD/NAD(P)-binding domain protein [Halomicrobium
mukohataei DSM 12286]
Length = 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 23/172 (13%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEI 149
GQY+ LR D P ++A+ P A EF ++ V G T+E+ +++GD V +
Sbjct: 118 GQYVTLRSGDT--PRAYSLANTP----AEHELEFCIRRVPGGRLTSELFVHVEEGDEVVV 171
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS------DVRLYY 203
G A+ D V+ ATG+G++P RS+IE F++ + + DV L+
Sbjct: 172 RGPYGE-MALSNPSSRD----VVFLATGTGVAPFRSMIEHLFATGQDTYRGTERDVWLFL 226
Query: 204 GARNLKRMAYQDKFKEWESSGVK--IVPVLSQPD--GNWSGETGYVQAAFSR 251
G + Y++ F+ + + VP L++ +W+GE YVQ F++
Sbjct: 227 GCAWRDDLPYREWFESLAENHERFHFVPTLTREPLLSDWTGEVDYVQRVFAK 278
>gi|408420317|ref|YP_006761731.1| Na(+)-translocating NADH-quinone reductase subunit F NqrF
[Desulfobacula toluolica Tol2]
gi|405107530|emb|CCK81027.1| NqrF: Na(+)-translocating NADH-quinone reductase, subunit F
[Desulfobacula toluolica Tol2]
Length = 402
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE--- 188
G + + GLK GD + +S G A + + G+G++P+RS I
Sbjct: 239 GFGSSYVFGLKPGDKLTVSGPYGDFMAKETDN------EMCFVGGGAGMAPLRSHILHQL 292
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDKFKEWE--SSGVKIVPVLSQPD--GNWSGETGY 244
G +K + + +YGAR+LK M Y D FK+ E LS PD W+G TG+
Sbjct: 293 DGIHTKRK--ISFWYGARSLKEMFYDDVFKDLERQHDNFTYHVALSNPDEEDRWTGMTGF 350
Query: 245 VQAAFSRAK--KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ A K +P LCG M + +++ GV + I
Sbjct: 351 IHTHLCEAYLCKHEDPTQIEYYLCGPPPMINAIINMLYDLGVEDDMIF 398
>gi|386058588|ref|YP_005975110.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa M18]
gi|347304894|gb|AEO75008.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa M18]
Length = 340
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAD 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|335035175|ref|ZP_08528518.1| naphthalene 1,2-dioxygenase [Agrobacterium sp. ATCC 31749]
gi|333793606|gb|EGL64960.1| naphthalene 1,2-dioxygenase [Agrobacterium sp. ATCC 31749]
Length = 335
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA----FEFLVKSVAG--STAE 136
D A + GQY++L D SP ++ AS EF ++ V G ++
Sbjct: 128 DRAQFTFKPGQYVRLLYPD---------CSPRDYSIASRVDEELIEFHIRHVPGGMTSGR 178
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
+ + GD V I G F ++ P +L A GSG++P+++++E+ ++
Sbjct: 179 IFSLARAGDPVAIVGPFGSSFLREKHCGP-----ILGIAGGSGLAPVKAVVEAALATGRE 233
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKK 254
V +Y+GAR + + D+F++ + + VPVLS D + + GYV AA A
Sbjct: 234 RPVHVYFGARAERDLYMLDRFQDLTTRHGNLSFVPVLSNED-HANIRRGYVGAAV--ADD 290
Query: 255 IFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ G + G M E +LA G+ + I
Sbjct: 291 FDDLDGWKAYIAGPPAMIEATVPQLLARGMRTADI 325
>gi|148651912|ref|YP_001279005.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychrobacter
sp. PRwf-1]
gi|148570996|gb|ABQ93055.1| NADH:ubiquinone oxidoreductase, subunit F [Psychrobacter sp.
PRwf-1]
Length = 412
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V +S G FA D ++ G+G++P+RS I F
Sbjct: 247 GKMSSYVFSLKPGDKVTVSGPYGEFFA------KDTKAEMVFIGGGAGMAPMRSHI---F 297
Query: 192 SSKER--SD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETG 243
+R SD + +YGAR+++ M Y + + +++++ + QP+ NW G TG
Sbjct: 298 DQLKRLHSDRKISFWYGARSVREMFYVEDYDMLAEQFDNFEWHVALSDPQPEDNWEGYTG 357
Query: 244 YVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ K NP+ +CG M V ++ + GV E IL
Sbjct: 358 FIHNVLFEEYLKDHPNPEDCEFYMCGPPVMNAAVIDMLHSLGVEDENIL 406
>gi|410623019|ref|ZP_11333839.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410157481|dbj|GAC29213.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 410
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK GD V IS G +A E ++F G+G++P+RS I
Sbjct: 244 AGKMSSFIWSLKAGDKVTISGPFGEFYA-------KETDAEMVFVGGGAGMAPMRSHIFD 296
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGY 244
K + +YGAR+ + M Y + F KE ++ + QP+ NW+G+TG+
Sbjct: 297 QLRRLKTPRKITFWYGARSSREMFYVEDFDMLAKENDNFEWHVALSDPQPEDNWTGDTGF 356
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E I+
Sbjct: 357 IHNVLLENYLKTHPAPEDCEFYMCGPPMMNAAVINMLKELGVEDENIM 404
>gi|317970416|ref|ZP_07971806.1| ferredoxin-NADP oxidoreductase [Synechococcus sp. CB0205]
Length = 391
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E +++ G + LC ++ G V+I+ +G+ + + P DE +++ ATG+GI+P
Sbjct: 195 YEKDGETINGVCSTFLCDIEPGAKVKITGPVGK----EMLLPEDEEANIIMLATGTGIAP 250
Query: 183 IRSLIESGFSSKERS----DVR----LYYGARNLKRMAYQDKFKEWES---SGVKIVPVL 231
+R+ + F ER + R L+ GA + Y D F +E + +
Sbjct: 251 MRTYLRRMFEPAEREKNGWNFRGKAWLFMGAPTTANLLYDDDFNRYEREFPENFRYTKAI 310
Query: 232 SQPDGNWSGETGYVQAAFS-RAKKIF----NPQGTGVVLCGQKQMA----EEVTSIVLAE 282
S+ N +G Y+Q S A +IF +P+ T V +CG + M E +T+ A+
Sbjct: 311 SREQKNANGGRMYIQDRVSENADEIFAMIEDPK-THVYMCGLRGMEPGIDEAMTTAAAAK 369
Query: 283 GVS 285
G+
Sbjct: 370 GLD 372
>gi|226497434|ref|NP_001149023.1| ferredoxin--NADP reductase, leaf isozyme [Zea mays]
gi|195624056|gb|ACG33858.1| ferredoxin--NADP reductase, leaf isozyme [Zea mays]
Length = 369
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D TV++ ATG+GI+P RS +
Sbjct: 183 VKGVCSNFLCDLKPGADVKITGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFLWK 238
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 239 MF-LEEHEDYKFTGLAWLFLGVPTSDSLLYKEELEKMKEMAPGNFRLDFAVSREQTNAAG 297
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + + ++ T V +CG K M + + I+L
Sbjct: 298 EKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGIDDIML 341
>gi|39936825|ref|NP_949101.1| phenylacetate-CoA oxygenase/reductase subunit PaaK
[Rhodopseudomonas palustris CGA009]
gi|39650682|emb|CAE29205.1| putative 2Fe:2S ferredoxin [Rhodopseudomonas palustris CGA009]
Length = 362
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 74 VSIDISDAPDIASSHTRA-GQYLQLRVVDVGKPTF--LAIASPPSFASASGAFEFLVKSV 130
+S+ + P++AS++ GQYL LR G+ +I S P G VK V
Sbjct: 26 ISLSFTVPPELASAYQFVPGQYLTLRTTMDGEEVRRSYSICSGPD----DGELRIAVKKV 81
Query: 131 AGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G V LK GD +E+ GR A+ ++ E T + FA GSGI+PI SLI+
Sbjct: 82 DGGAFSVWATEELKAGDTIEVMTPTGRFGALHAVE---ETRTYVGFAAGSGITPILSLIK 138
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDK---FKEWESSGVKIVPVLSQPDGNWSGETGYV 245
+ S L+YG R ++ +++ K+ + + VLSQ + + +
Sbjct: 139 GVLVREAGSRFFLFYGNRTTDQILFRESLETLKDRYLDRLAVFHVLSQEEQD----VPVM 194
Query: 246 QAAFSRAK-----KIFNPQGT--GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
Q R K P + V +CG M+++V + G+++E+I
Sbjct: 195 QGRLDRDKVRLLLTAMVPAASVDHVFICGPTGMSDDVETTCRDLGIAAERI 245
>gi|421180355|ref|ZP_15637920.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa E2]
gi|404545617|gb|EKA54693.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa E2]
Length = 340
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ + +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPNLQNH---LQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCEWPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|377569672|ref|ZP_09798831.1| putative phenol hydroxylase reductase component [Gordonia terrae
NBRC 100016]
gi|377533129|dbj|GAB43996.1| putative phenol hydroxylase reductase component [Gordonia terrae
NBRC 100016]
Length = 347
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++L + G+ ++A+PPS S EF V+ A + L G V
Sbjct: 141 AGQYVELSIPGTGQTRPYSMANPPS---ESATLEFHVRRQPDGLATDRWIFDSLTVGAAV 197
Query: 148 EISQVMGRGFAVDRIQPPDEYPTV--LIFATGSGISPIRSLIESGFSSKERSDVRLYYGA 205
++ G D P E P V ++ A G+G++P++S+ + + ++ +Y+G
Sbjct: 198 SMTGPWG-----DFCHQPGE-PDVGLILLAGGTGLAPLKSIARAALDADPDREIHVYHGV 251
Query: 206 RNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGV 263
R + D ++ E+ V+ P LS+ + WSG TGYV A + +
Sbjct: 252 RTEAELYDVDFWRALETGHPNVRYTPCLSREE--WSGRTGYVGDAM--MADFDSCRNHSA 307
Query: 264 VLCGQKQMAE 273
LCG M E
Sbjct: 308 YLCGPPAMVE 317
>gi|395009653|ref|ZP_10393154.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Acidovorax sp.
CF316]
gi|394312297|gb|EJE49479.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Acidovorax sp.
CF316]
Length = 353
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + + +P + A G E ++ +AG T V +K+ +++
Sbjct: 142 HAGQYIEFILRDGARRAYSMANAPHTQGEAPGV-ELHIRHMAGGRFTDHVFGAMKEKEIL 200
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERSDVRLYYGAR 206
+ G F + P +++ A+G+G +P ++LIE F R V LY+G R
Sbjct: 201 RVEGPFGSFFLREDSDKP-----IVLLASGTGFAPTKALIEHLQFKGSTRPTV-LYWGGR 254
Query: 207 NLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + D ++ E + VPV+S QP+ W+G TG+V A + G
Sbjct: 255 RPQDLYMADWVQQRLAEMPNLTYVPVVSDAQPEDGWTGRTGFVHQAV--MDDFADLSGHQ 312
Query: 263 VVLCG 267
V CG
Sbjct: 313 VYACG 317
>gi|422874457|ref|ZP_16920942.1| anaerobic sulfite reductase subunit B [Clostridium perfringens
F262]
gi|380304530|gb|EIA16818.1| anaerobic sulfite reductase subunit B [Clostridium perfringens
F262]
Length = 263
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKLGDKISLRGAYGKGWPVEQFKNKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGLVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV EKI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVPEEKIWVSF 225
>gi|445429357|ref|ZP_21438219.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC021]
gi|444761327|gb|ELW85735.1| oxidoreductase, FAD-binding domain protein [Acinetobacter baumannii
OIFC021]
Length = 353
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANAPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ P + W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLMKDYPNFRYIPALNAPKAEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>gi|336314881|ref|ZP_08569796.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Rheinheimera
sp. A13L]
gi|335880940|gb|EGM78824.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Rheinheimera
sp. A13L]
Length = 231
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
+ GQYLQL + + K F ++AS P E + + + L L+ D V
Sbjct: 32 KPGQYLQLCLTEQDKRPF-SVASIP----VQDQLELHIGGAVADQYSGQALAHLQSNDEV 86
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G+ F + D + +L+ A G+G S I S+ ++ ++ + V LY+G R+
Sbjct: 87 TVEVGLGQAFWRE-----DSHNPILLLAGGTGFSYIYSIAQAIAAAGVKRPVFLYWGVRH 141
Query: 208 LKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + + + ++W ++ +++PV+ P NW G +G V A + + +
Sbjct: 142 EEALYHMPELQQWAATHHDYRLMPVVQSPTDNWQGRSGLVHQAV--LDDFVSLDAYDIYI 199
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
G M V L +G E++ +
Sbjct: 200 AGPFPMVGVVRDAFLDQGAKREQMFAD 226
>gi|159184661|ref|NP_354213.2| naphthalene 1,2-dioxygenase [Agrobacterium fabrum str. C58]
gi|159139956|gb|AAK86998.2| naphthalene 1,2-dioxygenase [Agrobacterium fabrum str. C58]
Length = 335
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 83 DIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA----FEFLVKSVAG--STAE 136
D A + GQY++L D +SP ++ AS EF ++ V G ++
Sbjct: 128 DRAQFTFKPGQYVRLLYPD---------SSPRDYSIASRVDEELIEFHIRHVPGGMTSGR 178
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER 196
+ + GD V I G F ++ P +L A GSG++P+++++E+ ++
Sbjct: 179 IFSLARAGDPVTIVGPFGSSFLREKHCGP-----ILGIAGGSGLAPVKAVVEAALATGRE 233
Query: 197 SDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKK 254
V +Y+GAR + + D+F++ + + VPVLS D + + GYV AA A
Sbjct: 234 RPVHVYFGARAERDLYMLDRFQDLTTRHGNLSFVPVLSNED-HANIRRGYVGAAV--ADD 290
Query: 255 IFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ G + G M E +LA G+ + I
Sbjct: 291 FDDLDGWKAYIAGPPAMIEATVPQLLARGMRTADI 325
>gi|358380939|gb|EHK18616.1| hypothetical protein TRIVIDRAFT_50977 [Trichoderma virens Gv29-8]
Length = 1081
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRG-FAVDRIQPPDEYPT-VLIFATGSGISPIRSLIES 189
G T+ L L GD +++S G+G F + P D T ++ A G+GI+P R+ IE
Sbjct: 890 GVTSSYLSSLSPGDRLQVSVRAGQGGFRM----PADSSRTPIICIAAGTGIAPFRAFIEE 945
Query: 190 GF----SSKERSDVRLYYGARN-LKRMAYQDKFKEWESSGVKIV--PVLSQPDGNWSGET 242
F S + + L+YG RN L Y D+F WE++GV + QP+ + +
Sbjct: 946 RFIILRSGRPLAPAVLFYGCRNPLDDDLYYDEFSGWEAAGVVTIFRAYSRQPEASLGCK- 1004
Query: 243 GYVQAAFSRAKKI---FNPQGTGVVLCGQKQMAEEVTSIVL 280
YVQ R ++ + +CG +MAE V I++
Sbjct: 1005 -YVQHRIWRQREYVADLWESDAKIFVCGSNKMAEGVREILI 1044
>gi|146413008|ref|XP_001482475.1| hypothetical protein PGUG_05495 [Meyerozyma guilliermondii ATCC
6260]
Length = 294
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPS 115
W L ++ + + H ++ D++ T + L + V + +P S
Sbjct: 47 WIDLKLKKLWDVSSNTRHFVFELKSPEDVSGLVTAS--CLMTKFVTAKGNNVIRPYTPVS 104
Query: 116 FASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF 174
G +F++K G + GLK+GD V +G V P+++ ++ +
Sbjct: 105 DVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSF-----KGPIVKWKWEPNQFQSIALI 159
Query: 175 ATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVKIVPV 230
G+GI+P+ L+ E + ++++ V+L+YG + + + D E V I
Sbjct: 160 GGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDILIKKELDDIAEKHKDQVSITYF 219
Query: 231 LSQPDGNWSGETGYVQAAF--------SRAKKIF--NPQGTGVVLCGQK---QMAEEVTS 277
+ + NW GETG++ F S+ K+F P G L G K EVT
Sbjct: 220 VDKALANWKGETGHIDKEFLQSNLPGPSKDSKVFVCGPPGLYKALSGVKVSPTDQGEVTG 279
Query: 278 IVLAEGVSSEKILK 291
++ G + E + K
Sbjct: 280 VLAELGYTKENVYK 293
>gi|99078388|ref|YP_611646.1| Na(+)-translocating NADH-quinone reductase subunit F [Ruegeria sp.
TM1040]
gi|99035526|gb|ABF62384.1| NADH:ubiquinone oxidoreductase Na(+)-translocating F subunit
[Ruegeria sp. TM1040]
Length = 407
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 241 GQMSSYIFNLKPGDKVTISGPFGEFFARDTQK------EMVFIGGGAGMAPMRSHIFDQL 294
Query: 192 SSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
E D + +YGAR+ + M + + F +E+++ + + P+ +W G TG++
Sbjct: 295 KRLENRDRKITFWYGARSKREMFFVEDFDQLAEEFDNFEWHVALSDALPEDDWKGYTGFI 354
Query: 246 QAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 355 HNVLYEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIM 401
>gi|387128371|ref|YP_006296976.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylophaga
sp. JAM1]
gi|386275433|gb|AFI85331.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylophaga
sp. JAM1]
Length = 405
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 GIMSSYIFDLKPGDKVTISGPFGEFFAKDTDK------EMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQ 246
K + + +YGAR+L+ M Y + F E E+ LS P+ NW+G TG++
Sbjct: 294 RRLKSKRKMTFWYGARSLREMFYTEDFDELAAENENFTWHVALSDALPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 354 NVIYENYLKDHPAPEDCEYYMCGPPMMNAAVIKMLEDLGVEPENIM 399
>gi|258543918|ref|ZP_05704152.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Cardiobacterium hominis ATCC 15826]
gi|258520857|gb|EEV89716.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Cardiobacterium hominis ATCC 15826]
Length = 405
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GIMSSYIFNLKPGDKVTISGPFGEFFAKDTDA------EMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
+ + +YGAR+ + + YQ+ F +E+ + + + P+ NW+G TG++
Sbjct: 294 KRLHSKRKITFWYGARSKREIFYQEDFDKLAEEFPNFSWHVALSDALPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
+ K P+ +CG M + V ++ GV E I L NF
Sbjct: 354 NVVYENHLKNHPAPEDCEYYMCGPPMMTKSVIDMLHNLGVEDENILLDNF 403
>gi|433610056|ref|YP_007042425.1| Oxidoreductase FAD-binding domain protein [Saccharothrix
espanaensis DSM 44229]
gi|407887909|emb|CCH35552.1| Oxidoreductase FAD-binding domain protein [Saccharothrix
espanaensis DSM 44229]
Length = 367
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 14/204 (6%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
RAGQY+ + + SP + G EF ++SV G + V+ + GDV
Sbjct: 166 RAGQYVSVETPQ--RARLWRYFSPANAPRDDGIIEFHIRSVEGGWVSRSVVGHTQPGDVW 223
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
I MGR VDR D VL+ A G+G++P+ ++I+ E V L+ G R
Sbjct: 224 RIGPPMGR-LHVDRKSGND----VLMVAGGTGVAPMHAIIDEMAQWGENPRVHLFVGGRT 278
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + D + +S + +VPVL G E G + +R + V++
Sbjct: 279 REDLYDLDNLQRVAASNPWLTVVPVLESDPGARGVEQGTLADVVTRYGAW---EERDVLV 335
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKI 289
CG M S +L G ++I
Sbjct: 336 CGSPSMIRATVSRMLVAGTPLDRI 359
>gi|448417292|ref|ZP_21579310.1| oxidoreductase FAD-binding domain-containing protein [Halosarcina
pallida JCM 14848]
gi|445678515|gb|ELZ31008.1| oxidoreductase FAD-binding domain-containing protein [Halosarcina
pallida JCM 14848]
Length = 360
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 50/250 (20%)
Query: 79 SDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAE 136
+D PD S GQY ++ D +P +IAS P+ E ++ V G T
Sbjct: 112 ADDPDDTSFDYVPGQYARISYDD-EEPRVYSIASSPN----RDYVELCIRRVPGGELTPH 166
Query: 137 VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFS---- 192
+ K GD + + G +Q P E V I ATG+G++P +S+I F
Sbjct: 167 LCTETKVGDSLFVRGPYGDELM---LQEPSERDLVFI-ATGTGVAPFKSMINYVFEEGMD 222
Query: 193 --SKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQ 246
E DV L+ G+ + Y ++F++ E VP LS+ + +W+GET YVQ
Sbjct: 223 QYDGEDRDVWLFLGSSWEDHLPYHEEFRQLDEERGNFHYVPTLSRENYLTDWAGETDYVQ 282
Query: 247 AAFSR-----------------------------AKKIFNPQGTGVVLCGQKQMAEEVTS 277
R +P V +CG M + +
Sbjct: 283 YCLLRYLDREATDLDALPEEFADYADKEPTVDVDGDARVDPSKMEVYVCGIGAMCDPIED 342
Query: 278 IVLAEGVSSE 287
+V + GV E
Sbjct: 343 VVASLGVGEE 352
>gi|398808440|ref|ZP_10567303.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Variovorax sp.
CF313]
gi|398087472|gb|EJL78058.1| 2-polyprenylphenol hydroxylase-like oxidoreductase [Variovorax sp.
CF313]
Length = 332
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 17/185 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ +P + E ++ + G T V +K+ +++
Sbjct: 120 AGQYVEFILRDGARRSYSMANAPHTLGQPGTGIELHLRHLPGGKFTDHVFGTMKEKEILR 179
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES-GFSSKERSDVRLYYGARN 207
I G F + P +++ A+G+G +PI++L+E F ER LY+G R
Sbjct: 180 IEGPFGSFFLREDSGKP-----MILLASGTGFAPIKALLEHMKFKGIERP-ATLYWGGRR 233
Query: 208 LKRMAYQDKFKEWESS---GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + Y D + +++ ++ VPV+S P+ NW+G TG+V A + + G
Sbjct: 234 PEDL-YMDAWVREQTAQMPSLRYVPVISNATPEDNWTGRTGFVHQAV--LEDFADLSGYQ 290
Query: 263 VVLCG 267
V CG
Sbjct: 291 VYACG 295
>gi|182624750|ref|ZP_02952531.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens D
str. JGS1721]
gi|177910147|gb|EDT72541.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens D
str. JGS1721]
Length = 263
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKPGDKISLRGAYGKGWPVEQFKNKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGLVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV EKI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVLEEKIWVSF 225
>gi|254447596|ref|ZP_05061062.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[gamma proteobacterium HTCC5015]
gi|198262939|gb|EDY87218.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[gamma proteobacterium HTCC5015]
Length = 336
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY+ + + + +F ++A+ P E ++ V T V LK+ D++
Sbjct: 134 AGQYIDFLLKNGQRRSF-SLANAPH---DDALLELHIRRVDEGFFTGFVFERLKEKDLLR 189
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G + P +++ A G+G +PI+SLIE + + V L++G RN
Sbjct: 190 IEGPHGSFHLNEESDKP-----LILMAGGTGFAPIKSLIEHMIHTDDHRPVHLFWGVRNQ 244
Query: 209 KRMAYQDKFKEWESSG--VKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ + W+ ++ PVLS+ D W+GE G+V + R + V
Sbjct: 245 PDLYLNHLAELWQKKHHQIQYTPVLSEAAADREWTGERGWVHDSVIRHYADLSDH--EVY 302
Query: 265 LCGQKQMAEEVTSIVLAEGVSSE 287
CG M E + +G++ E
Sbjct: 303 CCGPPPMIEAAKHALKQQGLNEE 325
>gi|171057359|ref|YP_001789708.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Leptothrix cholodnii
SP-6]
gi|170774804|gb|ACB32943.1| oxidoreductase FAD/NAD(P)-binding domain protein [Leptothrix
cholodnii SP-6]
Length = 343
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVE 148
AGQY++ + D + ++ ++A+ P G+ E ++ + G T V +K+ +++
Sbjct: 134 AGQYVEFILRDGVRRSY-SMANAPELVQ--GSIELHIRHMPGGRFTDHVFGAMKEKEILR 190
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNL 208
I G F ++ + P VL+ A+G+G +PI++LIE + RLY+G R+
Sbjct: 191 IEGPYGSFF----LREDSDKPIVLL-ASGTGFAPIKALIEHMRARGIVRPTRLYWGCRSR 245
Query: 209 KRMAYQDKFKEWESSG----VKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ Y + E +++G + PVLSQP D W G TG V A + + +G
Sbjct: 246 ADL-YLHNWAE-QAAGELPWLSYEPVLSQPRADDGWCGRTGLVHHAV--LADLPDLRGHQ 301
Query: 263 VVLCGQKQMAEEVTSIVLAE-GVSSEKILKN 292
V CG M E +A+ G+ E+ +
Sbjct: 302 VYACGAPIMVESARCDFVAQAGLPDEEFYAD 332
>gi|259415324|ref|ZP_05739245.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter sp.
TrichCH4B]
gi|259348554|gb|EEW60316.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter sp.
TrichCH4B]
Length = 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 241 GQMSSYIFNLKPGDKVTISGPFGEFFARDTQK------EMVFIGGGAGMAPMRSHIFDQL 294
Query: 192 SSKERSD--VRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
E D + +YGAR+ + M + + F +E+++ + + P+ +W G TG++
Sbjct: 295 KRLENRDRKITFWYGARSKREMFFVEDFDQLAEEFDNFEWHVALSDALPEDDWKGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 355 HNVLFEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLELGVDREDIM 401
>gi|226363154|ref|YP_002780936.1| phenol hydroxylase reductase component [Rhodococcus opacus B4]
gi|226241643|dbj|BAH51991.1| putative phenol hydroxylase reductase component [Rhodococcus opacus
B4]
Length = 342
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS + EF V++ G A + L GD +
Sbjct: 134 AGQYAELIVTGSGVARQYSMANPPSEPTL---LEFHVRNTEGGLATDGWIFDTLAVGDRI 190
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ F V I+P +E P +LI G+G++P++S++ ++ LY+G R
Sbjct: 191 DLRGPLGQ-FGV--IEPQEE-PAILI-GGGTGLAPLKSIVRHALDGDLLPEIHLYHGGRR 245
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ ++ + PVLS+ W G TG V A + +G L
Sbjct: 246 EADLYDIEYFRAVAAADSRFHYHPVLSEE--TWDGATGMVTDAV--LNDFASCRGHSAYL 301
Query: 266 CGQKQM 271
CG M
Sbjct: 302 CGPPAM 307
>gi|535285|emb|CAA85385.1| phenolhydroxylase component [Acinetobacter calcoaceticus]
Length = 350
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ +++ ++ +IA+ PS E ++ V G +T V L G+ +
Sbjct: 133 QAGQYINIQLPNIEGTRAFSIANTPS---DKNLIELHIRKVQGGAATRYVHDELSVGEEM 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F ++ D+ V+ A GSG+S ++S+I + + L+ GAR+
Sbjct: 190 ALSGPYGQFF----VRKSDQ-QNVIFIAGGSGLSSLQSMILDLLEHGDTRIIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + ++KF++ E + +P L+ +P+ W+G TGYV A + F + +G
Sbjct: 245 VAELYNREKFEQLVKEYPNFRYIPALNAPKPEDQWTGFTGYVHEAVA---NYFENKCSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPPMIDAAISTLM 320
>gi|392536333|ref|ZP_10283470.1| FMN reductase [Pseudoalteromonas arctica A 37-1-2]
Length = 237
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLSEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLRNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G + +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIEA----GLGISQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
+G + + + + W S + +PV+ P NW G TGYV A + I + +
Sbjct: 142 WGVKEESALYAHTEMQTWADSHKNFEFIPVVENPSANWQGHTGYVHKAV--MQDIVSLEP 199
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ + G+ M V + G E + +
Sbjct: 200 YDIYMAGRFDMIGIVRDDFITHGAIRENMYAD 231
>gi|120610657|ref|YP_970335.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Acidovorax citrulli
AAC00-1]
gi|120589121|gb|ABM32561.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidovorax
citrulli AAC00-1]
Length = 357
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 21/233 (9%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P +A ++ A+ + V + + A D H AGQY++ + D + + ++A+ P
Sbjct: 112 PVRVAALARASHDVMVVRLQLP-AADTFRYH--AGQYVEFILKDGARRAY-SMANAPHTQ 167
Query: 118 SASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
S E ++ + G T V +K+ +++ + G F + P +++ A
Sbjct: 168 EGSPGIELHIRHMPGGRFTDHVFGAMKEKEILRVEGPFGSFFLREDSPKP-----IILLA 222
Query: 176 TGSGISPIRSLIES-GFSSKERSDVRLYYGARNLKRMAYQDKF---KEWESSGVKIVPVL 231
+G+G +P+++LIE F +R V LY+G R + Y D + + + G++ VPV+
Sbjct: 223 SGTGFAPVKALIEHLRFKGIDRP-VTLYWGGRRPADL-YMDAWVRERLADMPGLRYVPVV 280
Query: 232 SQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
S P+ W+G TG+V A + G V CG + E AE
Sbjct: 281 SHALPEDGWTGRTGFVHQAVMDDHADLS--GHQVYACGAPVVVESARKAYSAE 331
>gi|333368704|ref|ZP_08460873.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychrobacter
sp. 1501(2011)]
gi|332976493|gb|EGK13338.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychrobacter
sp. 1501(2011)]
Length = 412
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD + +S G FA D ++ G+G++P+RS I F
Sbjct: 247 GKMSSYVFSLKPGDKITVSGPYGEFFA------KDTKAEMVFIGGGAGMAPMRSHI---F 297
Query: 192 SSKER--SD--VRLYYGARNLKRMAY-------QDKFKEWESSGVKIVPVLSQPDGNWSG 240
+R SD + +YGAR+++ M Y Q++F +E P QP+ NW G
Sbjct: 298 DQLKRLHSDRKITFWYGARSVREMFYVEDYDMLQEQFDNFEWHVALSDP---QPEDNWEG 354
Query: 241 ETGYVQAAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
TG++ K NP+ +CG M V ++ GV E IL
Sbjct: 355 YTGFIHNVLYEEYLKDHPNPEDCEYYMCGPPVMNAAVIDMLHNLGVEDENIL 406
>gi|359492254|ref|XP_002274366.2| PREDICTED: ferredoxin--NADP reductase, leaf isozyme,
chloroplastic-like [Vitis vinifera]
gi|302142677|emb|CBI19880.3| unnamed protein product [Vitis vinifera]
Length = 363
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D TV++ ATG+GI+P RS +
Sbjct: 177 VKGVCSNFLCDLKPGADVKITGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFLWK 232
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
F K D + L+ G + Y+D+F KE ++ +S+ N G
Sbjct: 233 MFFEK-YEDYKFKGLGWLFLGVPTTSSLLYKDEFEKMKEKAPENFRVDYAVSREQTNEKG 291
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
E Y+Q ++ ++ T V +CG K M + + I+++
Sbjct: 292 EKMYIQTRMAQYAEELWELLKKDNTYVYMCGLKGMEKGIDDIMVS 336
>gi|71281144|ref|YP_267829.1| Na(+)-translocating NADH-quinone reductase subunit F [Colwellia
psychrerythraea 34H]
gi|71146884|gb|AAZ27357.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Colwellia psychrerythraea 34H]
Length = 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 241 AGKMSSFIFSLKAGDKVTISGPFGEFFA-------KETDNEMVFIGGGAGMAPMRSHIFD 293
Query: 190 GFSSKE-RSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
E + + +YGAR+ + M Y+D + ++ + LS QP+ NW G TG+
Sbjct: 294 QLKRLESKRKMSFWYGARSKREMFYEDDYNGLAADNDNFQWHVALSDPQPEDNWDGLTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 354 IHNVLFEEYLKDHEAPEDCEYYMCGPPMMNAAVIGMLKDLGVEDENIM 401
>gi|87121315|ref|ZP_01077205.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
sp. MED121]
gi|86163472|gb|EAQ64747.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
sp. MED121]
Length = 408
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD +++ G FA D ++ G+G++P+RS I
Sbjct: 243 GQMSSYVFSLKPGDTIKVYGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 296
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + +YGAR+L+ Y +++ + E+ K LS QP+ NW G G++
Sbjct: 297 KRLKSTRKMSFWYGARSLREAFYNEEYDMLQDENENFKWHLALSDPQPEDNWEGYQGFIH 356
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++L GV +E IL
Sbjct: 357 NVLYENYLKDHPAPEDCEFYMCGPPMMNQAVVQMLLDLGVENENIL 402
>gi|432343361|ref|ZP_19592539.1| phenol hydrolase [Rhodococcus wratislaviensis IFP 2016]
gi|430771613|gb|ELB87463.1| phenol hydrolase [Rhodococcus wratislaviensis IFP 2016]
Length = 339
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY +L V G ++A+PPS EF V++ AG A + L GD +
Sbjct: 131 AGQYAELIVPGSGVARQYSMANPPS---EQRLLEFHVRNTAGGLATEGWIFDSLAVGDRI 187
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
++ +G+ F V + E P +LI G+G++P++S++ + LY+G R
Sbjct: 188 DLRGPLGQ-FGVVEAR---EEPAILI-GGGTGLAPLKSIVRHALDHDLLPAIHLYHGGRR 242
Query: 208 LKRMAYQDKFKEWESSGVKI--VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + F+ E++ + PVLS+ NW G TG V A + +G L
Sbjct: 243 EADLYDVECFRAMEATDSRFHYHPVLSEE--NWDGATGMVTDAV--LGDFASCRGHSGYL 298
Query: 266 CGQKQM 271
CG M
Sbjct: 299 CGPPAM 304
>gi|419833378|ref|ZP_14356839.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-61A2]
gi|422917335|ref|ZP_16951662.1| hypothetical protein VCHC02A1_1647 [Vibrio cholerae HC-02A1]
gi|423820362|ref|ZP_17716265.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-55C2]
gi|423853733|ref|ZP_17720059.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-59A1]
gi|423997750|ref|ZP_17741008.1| hypothetical protein VCHC02C1_1654 [Vibrio cholerae HC-02C1]
gi|424016457|ref|ZP_17756297.1| hypothetical protein VCHC55B2_1650 [Vibrio cholerae HC-55B2]
gi|424019395|ref|ZP_17759190.1| hypothetical protein VCHC59B1_1485 [Vibrio cholerae HC-59B1]
gi|424624941|ref|ZP_18063412.1| hypothetical protein VCHC50A1_1656 [Vibrio cholerae HC-50A1]
gi|424629443|ref|ZP_18067739.1| hypothetical protein VCHC51A1_1570 [Vibrio cholerae HC-51A1]
gi|424633473|ref|ZP_18071582.1| hypothetical protein VCHC52A1_1657 [Vibrio cholerae HC-52A1]
gi|424640501|ref|ZP_18078390.1| hypothetical protein VCHC56A1_1771 [Vibrio cholerae HC-56A1]
gi|424648538|ref|ZP_18086207.1| hypothetical protein VCHC57A1_1554 [Vibrio cholerae HC-57A1]
gi|443527360|ref|ZP_21093423.1| hypothetical protein VCHC78A1_01496 [Vibrio cholerae HC-78A1]
gi|341638312|gb|EGS62966.1| hypothetical protein VCHC02A1_1647 [Vibrio cholerae HC-02A1]
gi|408013695|gb|EKG51391.1| hypothetical protein VCHC50A1_1656 [Vibrio cholerae HC-50A1]
gi|408019498|gb|EKG56897.1| hypothetical protein VCHC52A1_1657 [Vibrio cholerae HC-52A1]
gi|408024539|gb|EKG61640.1| hypothetical protein VCHC56A1_1771 [Vibrio cholerae HC-56A1]
gi|408034302|gb|EKG70807.1| hypothetical protein VCHC57A1_1554 [Vibrio cholerae HC-57A1]
gi|408056630|gb|EKG91507.1| hypothetical protein VCHC51A1_1570 [Vibrio cholerae HC-51A1]
gi|408635388|gb|EKL07589.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-55C2]
gi|408642427|gb|EKL14172.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-59A1]
gi|408650702|gb|EKL21977.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-61A2]
gi|408853176|gb|EKL92976.1| hypothetical protein VCHC02C1_1654 [Vibrio cholerae HC-02C1]
gi|408860825|gb|EKM00434.1| hypothetical protein VCHC55B2_1650 [Vibrio cholerae HC-55B2]
gi|408868534|gb|EKM07860.1| hypothetical protein VCHC59B1_1485 [Vibrio cholerae HC-59B1]
gi|443454454|gb|ELT18258.1| hypothetical protein VCHC78A1_01496 [Vibrio cholerae HC-78A1]
Length = 605
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 312 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 368
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 369 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 423
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 424 EQDIPCQAELDALAKQHAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 481
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 482 CGPDGFMQKAKNLLLKQGVA 501
>gi|386332682|ref|YP_006028851.1| ferredoxin oxidoreductase protein [Ralstonia solanacearum Po82]
gi|334195130|gb|AEG68315.1| ferredoxin oxidoreductase protein [Ralstonia solanacearum Po82]
Length = 349
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 21/170 (12%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKG----- 144
AGQY++ + D GK ++A+PP A G E ++ + G+ + + G K+G
Sbjct: 134 AGQYVEFILRD-GKRRSYSLANPPH---ADGPIELHIRHMPGGAFTDYVFGAKEGQPAMK 189
Query: 145 --DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
D++ +G F + P +++ A+G+G +PI+++IE + + LY
Sbjct: 190 ERDILRFEGPLGSFFLREESDKP-----IILLASGTGFAPIKAIIEHAQFVGLKRPMTLY 244
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLS--QPDGNWSGETGYVQAA 248
+G R + + + + W + + VPV+S +P+ W+G G+V A
Sbjct: 245 WGGRRPQDLYMHAQAEAWTRALPNFQYVPVISDARPEDAWTGRIGFVHQA 294
>gi|85713077|ref|ZP_01044113.1| Na(+)-translocating NADH-quinone reductase subunit F [Idiomarina
baltica OS145]
gi|85693116|gb|EAQ31078.1| Na(+)-translocating NADH-quinone reductase subunit F [Idiomarina
baltica OS145]
Length = 410
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 244 AGKMSSYIFSLKPGDKVTISGPFGEFFA-------KETEAEMVFVGGGAGMAPMRSHI-- 294
Query: 190 GFSSKERSD----VRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGE 241
F R + + +YGAR+ + M Y + F + E+ + LS QP+ +W G+
Sbjct: 295 -FDQLRRLNTDRKISFWYGARSKREMFYTEDFDMLQEENDNFEWHVALSDPQPEDDWDGD 353
Query: 242 TGYVQAA-FSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
TG++ + R K + P+ +CG M V +++ GV E I+
Sbjct: 354 TGFIHNVLYERYLKDHDAPEDCEFYMCGPPVMNAAVINMLKELGVEDENIM 404
>gi|423881063|ref|ZP_17723661.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-60A1]
gi|408642244|gb|EKL14001.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-60A1]
Length = 586
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 293 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 349
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 350 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 404
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 405 EQDIPCQAELDALAKQHAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 462
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 463 CGPDGFMQKAKNLLLKQGVA 482
>gi|23321094|gb|AAN23035.1|AF461768_1 CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia
pseudotuberculosis]
Length = 329
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 27/242 (11%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFVGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+S D W+G TG+V A + I + V CG M + + G++ K
Sbjct: 264 VSGDDSTWTGATGFVHQAV--LEDIPDLSLFTVYACGSLAMITAARNDFINHGLAENKFF 321
Query: 291 KN 292
+
Sbjct: 322 SD 323
>gi|384103892|ref|ZP_10004855.1| hydrogenase/ sulfur reductase [Rhodococcus imtechensis RKJ300]
gi|383838503|gb|EID77874.1| hydrogenase/ sulfur reductase [Rhodococcus imtechensis RKJ300]
Length = 282
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ++ L VG+ ++++ PS G ++ V G+ ++ L G ++ +
Sbjct: 47 GQFMMLYAHGVGE-VAISVSGDPS--RTDGTLVHTIRDV-GAVSQALHDAPLGTIIGVRG 102
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKR 210
G+G+ + P ++I A G G++P+R ++ + +++E+ + L GAR+
Sbjct: 103 PFGQGWNL----PAGSDRDLVIVAGGVGLAPLRPVVLAALAAREKFRRLTLVVGARSPAD 158
Query: 211 MAYQDKFKEWES-SGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ Y+ + W++ + + + + QP W+G G+V + R +P+ T +LCG +
Sbjct: 159 ILYRSELAAWQARTDLTVELTIDQPIAGWTGGVGFVTESLHRVD--VDPEHTTALLCGPE 216
Query: 270 QM 271
M
Sbjct: 217 PM 218
>gi|359432168|ref|ZP_09222561.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20652]
gi|357921260|dbj|GAA58810.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20652]
Length = 237
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLGEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLRNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G + +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIEA----GLGISQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAA 248
+G + + + + W +S + +PV+ P NW G TGYV A
Sbjct: 142 WGVKEESALYAHTEMQTWANSHKNFEFIPVVENPSANWQGHTGYVHKA 189
>gi|402572692|ref|YP_006622035.1| 2-polyprenylphenol 6-hydroxylase [Desulfosporosinus meridiei DSM
13257]
gi|402253889|gb|AFQ44164.1| 2-polyprenylphenol hydroxylase-like oxidoreductase
[Desulfosporosinus meridiei DSM 13257]
Length = 280
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 75 SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGST 134
+++ + D + GQ+ +L G+ F IA+ P+ G +F V V G
Sbjct: 29 TLEFMNKQDEENFKYMPGQFAELSAYGHGEAPF-GIATSPT---EPGILKFSVAKV-GCV 83
Query: 135 AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK 194
+ L +++G +V + MG + +++ + + V+I G + +RSL + K
Sbjct: 84 SNALHLMEEGTMVGVRGPMGNYYPIEQFKGKN----VVIIGGGFAFTTLRSLAKYMLDDK 139
Query: 195 ERSD---VRLYYGARNLKRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYV 245
R D + + YGARN + Y+++ EWE++ + +V + +P W+ G++
Sbjct: 140 HRGDYGDITVIYGARNPGLLLYKEELAEWENNPNINLVTTIDRPAEGWTKHVGFI 194
>gi|404404266|ref|ZP_10995850.1| Na(+)-translocating NADH-quinone reductase subunit F [Alistipes sp.
JC136]
Length = 420
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IA+PP F A+G F +K G + + K GD + IS G F D + PD
Sbjct: 229 IRIATPP-FDKATGGF---MKVNPGICSSYVFSRKPGDKITISGPYGEFFLPDNL--PDT 282
Query: 168 YPTVLIFATGSGISPIRSLIESGF-SSKERSDVRLYYGARNLKRMAYQDKFKEWESS--G 224
+ I G+G++P+RS + F + K V +YGAR LK + Y D+F + E
Sbjct: 283 QELIFI-GGGAGMAPMRSHLMHLFKTEKTNRPVSFWYGARALKEVPYLDEFHQIEKDFPN 341
Query: 225 VKIVPVLSQPD--GNWSG---ETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTS 277
K L +PD + +G G+V + K P+ ++CG M V
Sbjct: 342 FKFNLALDRPDPEADAAGVAYTPGFVHNVLYENYLKNHQAPEDCIYLMCGPPMMIASVVK 401
Query: 278 IVLAEGVSSEKIL-KNF 293
++ GV E IL NF
Sbjct: 402 MLDDLGVPPENILYDNF 418
>gi|217974644|ref|YP_002359395.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS223]
gi|217499779|gb|ACK47972.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS223]
Length = 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 239 AGKMSSYIFNLKAGDTVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 292
Query: 191 FSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 293 LKSKKTTRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 352
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 353 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|157961404|ref|YP_001501438.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
pealeana ATCC 700345]
gi|157846404|gb|ABV86903.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella pealeana ATCC
700345]
Length = 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 24/188 (12%)
Query: 110 IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
IA+PPS A G + + LK GD V IS G F ++ D
Sbjct: 229 IATPPSDNIA-----------PGKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--A 271
Query: 170 TVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV 228
++ G+G++P+RS I + K + + +YGAR+ + + YQD F + V
Sbjct: 272 EMVFIGGGAGMAPMRSHIFNQLKGVKTKRKMSFWYGARSTREVFYQDDFDTLAAENDNFV 331
Query: 229 --PVLSQ--PDGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAE 282
LS P+ NW+G TG++ + K P+ +CG M V +++ +
Sbjct: 332 WHVALSDPLPEDNWTGYTGFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIAMLESL 391
Query: 283 GVSSEKIL 290
GV E IL
Sbjct: 392 GVEPENIL 399
>gi|94499519|ref|ZP_01306056.1| Na(+)-translocating NADH-quinone reductase subunit F [Bermanella
marisrubri]
gi|94428273|gb|EAT13246.1| Na(+)-translocating NADH-quinone reductase subunit F [Oceanobacter
sp. RED65]
Length = 411
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + +K GD V + G FA D ++ G+G++P+RS I
Sbjct: 246 GIMSSYVFNMKPGDKVTVYGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 299
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYVQ 246
K + +YGAR+L+ + YQD++ +E+E+ + QP+ NW G TG++
Sbjct: 300 KRLKSDRKISFWYGARSLRELFYQDEYDALAEEFENFTWHVAMSDPQPEDNWDGLTGFIH 359
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V ++ GV E I+
Sbjct: 360 NVLYEQYLKDHPAPEDCEFYMCGPPIMNQSVIKMLEDLGVEPENIM 405
>gi|127513804|ref|YP_001095001.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
loihica PV-4]
gi|126639099|gb|ABO24742.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella loihica PV-4]
Length = 415
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 249 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 302
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 303 LKRLKSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 362
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E IL
Sbjct: 363 HNVLYENYLRDHDAPEDCEFYMCGPPMMNAAVIGMLKDLGVEDENIL 409
>gi|192292651|ref|YP_001993256.1| phenylacetate-CoA oxygenase/reductase subunit PaaK
[Rhodopseudomonas palustris TIE-1]
gi|192286400|gb|ACF02781.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit
[Rhodopseudomonas palustris TIE-1]
Length = 362
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 74 VSIDISDAPDIASSHTRA-GQYLQLRVVDVGKPTF--LAIASPPSFASASGAFEFLVKSV 130
+S+ + P++AS++ GQYL LR G+ +I S P G VK V
Sbjct: 26 ISLSFTVPPELASAYQFVPGQYLTLRTTMDGEEVRRSYSICSGPD----DGELRIAVKKV 81
Query: 131 AGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIE 188
G V LK GD +E+ GR A+ ++ E T + FA GSGI+PI SLI+
Sbjct: 82 DGGAFSVWATEELKAGDTIEVMTPTGRFGALHAVE---ETRTYVGFAAGSGITPILSLIK 138
Query: 189 SGFSSKERSDVRLYYGARNLKRMAYQDK---FKEWESSGVKIVPVLSQPDGNWSGETGYV 245
+ S L+YG R ++ +++ K+ + + VLSQ + + +
Sbjct: 139 GVLVREPGSRFFLFYGNRTTDQILFRESLETLKDRYLDRLAVFHVLSQEEQD----VPVM 194
Query: 246 QAAFSRAK-----KIFNPQGT--GVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
Q R K P + V +CG M+++V + G+++E+I
Sbjct: 195 QGRLDRDKVRLLLTAMVPAASVDHVFICGPTGMSDDVETTCRDLGIAAERI 245
>gi|116071027|ref|ZP_01468296.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. BL107]
gi|116066432|gb|EAU72189.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. BL107]
Length = 398
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+ + G + LC ++ G V+I+ +G+ + + P DE +++ ATG+GI+P+R+ +
Sbjct: 207 EQIYGVCSTYLCDIEPGTKVKITGPVGK----EMLLPEDEDANIIMLATGTGIAPMRTYL 262
Query: 188 ESGFSSKERS--------DVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDG 236
F SKER+ L+ GA + Y D F + + +S+ +
Sbjct: 263 RRMFESKERNANGWSFKGKAWLFMGAPKTANLLYDDDFNHYLKEYPDNFRYTKAISREEQ 322
Query: 237 NWSGETGYVQAAFS-RAKKIF----NPQGTGVVLCGQKQM 271
N G Y+Q S A +IF +P+ T V +CG + M
Sbjct: 323 NSKGGRMYIQDRVSEHADEIFAMIEDPK-THVYMCGLRGM 361
>gi|90417528|ref|ZP_01225450.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium HTCC2207]
gi|90330681|gb|EAS45965.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2207]
Length = 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + GLK GD + + G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYTFGLKAGDKITVYGPFGEFFAKDTDN------EMVFVGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+L+ Y D++ E+ LS QP+ NW G TG++
Sbjct: 296 KRLKSKRKISFWYGARSLRECFYDDEYDALAAENDNFDWHLALSDPQPEDNWDGLTGFIH 355
Query: 247 AA-FSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
F + K P+ +CG M V ++ GV E I
Sbjct: 356 NVLFEQYLKDHEAPEDCEFYMCGPPMMNAAVVKLLQDLGVEDENIF 401
>gi|392553222|ref|ZP_10300359.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas spongiae UST010723-006]
Length = 408
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 CGKMSSYIWSLKEGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHI--- 292
Query: 191 FSSKER--SDVRL--YYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGET 242
F +R SD ++ +YGAR+ + M Y + F ++ V + QP+ NW G T
Sbjct: 293 FDQLKRLNSDRKMSFWYGARSKREMFYVEDFDGLQAENDNFVWHCALSDPQPEDNWEGYT 352
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + + P+ +CG M V +++ GV E IL
Sbjct: 353 GFIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVINMLKDLGVEDENIL 402
>gi|359440194|ref|ZP_09230118.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20429]
gi|358038029|dbj|GAA66367.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20429]
Length = 237
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLGEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLRNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G V +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIEA----GLGVSQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQG 260
+G + + + + W S + +PV+ P NW G TGYV A + I + +
Sbjct: 142 WGVKEESALYAHTEMQTWADSHKNFEFIPVVENPSANWQGHTGYVHKAV--MQDIVSLEP 199
Query: 261 TGVVLCGQKQMAEEVTSIVLAEGVSSEKILKN 292
+ + G+ M V + G E + +
Sbjct: 200 YDIYMAGRFDMIGIVRDDFITHGAIRENMYAD 231
>gi|336309965|ref|ZP_08564938.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. HN-41]
gi|335866525|gb|EGM71503.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. HN-41]
Length = 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
SK+ + + +YGAR+ + + YQ+ F + V LS+P + NW+G TG++
Sbjct: 294 KSKKTKRKMSFWYGARSTREVFYQEDFDTLAAENDNFVWHVALSEPLLEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 354 NVLYENYLKNHKAPEDCEFYMCGPPIMNSSVIRMLESLGVEPENIL 399
>gi|323703673|ref|ZP_08115315.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Desulfotomaculum
nigrificans DSM 574]
gi|333922370|ref|YP_004495950.1| dihydroorotate dehydrogenase electron transfer subunit
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333922376|ref|YP_004495956.1| dihydroorotate dehydrogenase electron transfer subunit
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323531388|gb|EGB21285.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain [Desulfotomaculum
nigrificans DSM 574]
gi|333747931|gb|AEF93038.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333747937|gb|AEF93044.1| Dihydroorotate dehydrogenase, electron transfer subunit,
iron-sulfur cluster binding domain protein
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 277
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 21/243 (8%)
Query: 56 WTPTPLA---EISPAAESLFHV-SIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIA 111
+ P P+ + ++ L H +++ + D + GQ+ ++ V G+ F IA
Sbjct: 5 YLPLPMKLVKNFTETSDKLIHTFTLEFLNEQDAENFKYEPGQFAEVMVYGKGEAPF-GIA 63
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P+ G +F V V G + L L++G +V + +G + +++++ ++
Sbjct: 64 SSPT---EKGILKFSVAKV-GVVSTALHMLEEGSIVGVRGPLGNSYPLEQLKGK----SL 115
Query: 172 LIFATGSGISPIRSLIESGFSSKERSD---VRLYYGARNLKRMAYQDKFKEWES-SGVKI 227
I G + +RS I+ R D + + YGARN + Y+D+ W++ S + +
Sbjct: 116 TIIGGGFAFTTLRSTIQYILDPANRGDYGDLTVIYGARNPGLLLYKDELAAWDARSDINL 175
Query: 228 VPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
V + + W+G G++ A K P+ ++CG M + ++ G + +
Sbjct: 176 VTTIDRAVEGWNGRVGFIPA----VTKEVAPKTDYAIICGPPVMIKFTLPVLEECGFTPD 231
Query: 288 KIL 290
+I+
Sbjct: 232 RII 234
>gi|119944522|ref|YP_942202.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychromonas
ingrahamii 37]
gi|119863126|gb|ABM02603.1| NADH:ubiquinone oxidoreductase, subunit F [Psychromonas ingrahamii
37]
Length = 407
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
G + + LK+GD V IS G FA E +IF G+G++P+RS I
Sbjct: 241 CGKMSSYIFSLKEGDKVTISGPFGEFFA-------KESENEMIFIGGGAGMAPMRSHIFD 293
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGY 244
F K + V +YGAR+ + M Y + F E+ + LS P + NW G TG+
Sbjct: 294 QFGRLKTKRKVSFWYGARSRREMFYVEDFDSIAAENKNFEWHVALSDPQKEDNWDGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI-LKNF 293
+ + K+ P+ +CG M V +++ GV E I L +F
Sbjct: 354 IHNVLLENYLKEHEAPEDCEYYMCGPPVMNAAVIAMLKDLGVEDENIALDDF 405
>gi|416856133|ref|ZP_11911840.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 138244]
gi|334842387|gb|EGM20996.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 138244]
gi|453044930|gb|EME92651.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
PA21_ST175]
Length = 340
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|315125217|ref|YP_004067220.1| FMN reductase [Pseudoalteromonas sp. SM9913]
gi|315013730|gb|ADT67068.1| FMN reductase [Pseudoalteromonas sp. SM9913]
Length = 237
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-KSVAGSTA-EVLCGLKKGDVV 147
AGQYLQL + + K F +IAS PS + A E + SVA S A + L L+
Sbjct: 32 EAGQYLQLVLGEKDKRAF-SIASRPS---QTDALELHIGASVADSYAMQSLEHLRSAHNN 87
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ + G V +++ E P +L+ A G+G S +S+ + + V Y+G +
Sbjct: 88 NQTVTIEAGLGVSQLRLQCERPIILL-AGGTGFSYAKSMADHLAEINCQRPVLFYWGVKE 146
Query: 208 LKRMAYQDKFKEWESSG--VKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + K W S + +PV+ P +W+G TGYV A I + + + +
Sbjct: 147 ESALYAHSEMKAWADSHKHFEFIPVVENPTDSWTGHTGYVHKAV--MDDIISLEPYDIYM 204
Query: 266 CGQKQMAEEVTSIVLAEGVSSEKILKN 292
G+ M V ++ G E + +
Sbjct: 205 AGRFDMIGIVRDDFISHGAIRENMYAD 231
>gi|385332442|ref|YP_005886393.1| phenylacetic acid degradation oxidoreductase PaaK [Marinobacter
adhaerens HP15]
gi|311695592|gb|ADP98465.1| phenylacetic acid degradation oxidoreductase PaaK [Marinobacter
adhaerens HP15]
Length = 359
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 20/240 (8%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASS-HTRAGQYLQLRVVDVGKPTFLAIASPPSFASA 119
L E+ P + ++ D+ + D+A H + GQ+L +R G+ + + S
Sbjct: 9 LKEVRPETRNAVSLAFDVPE--DLADKFHYQQGQHLIVRTKLDGEEVRRSYSICRSVNDQ 66
Query: 120 SGAFEFLVKSVAGSTAEVLCG--LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATG 177
VK V G LK G +E+ G F+VD P+ L A G
Sbjct: 67 E--LRIAVKQVPGGRFSTFANEQLKPGQTLEVMPPQGH-FSVDL--DPEREGNYLAVAAG 121
Query: 178 SGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQP 234
SGI+PI S++++ ++ +S+V L+YG + ++D+ ++ ++ S + +V + ++
Sbjct: 122 SGITPILSIVKTTLETEPKSEVTLFYGNKATSSTMFRDELQDLKNEYMSRLNLVYIFTRE 181
Query: 235 DGNWSGETGYVQAAFSRAKKIFN-----PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
+ + G + + K+F+ + T +CG + M E V +L G+ +I
Sbjct: 182 EQDIDLYNGRID--HEKCDKLFDHWINAKELTAAFICGPQMMTETVRDSLLNHGMEKSRI 239
>gi|218891508|ref|YP_002440375.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa LESB58]
gi|254235511|ref|ZP_04928834.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa C3719]
gi|254240945|ref|ZP_04934267.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 2192]
gi|392983931|ref|YP_006482518.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa DK2]
gi|419753472|ref|ZP_14279876.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
PADK2_CF510]
gi|421154096|ref|ZP_15613621.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa ATCC
14886]
gi|424941772|ref|ZP_18357535.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
NCMG1179]
gi|451986522|ref|ZP_21934703.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 18A]
gi|126167442|gb|EAZ52953.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa C3719]
gi|126194323|gb|EAZ58386.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 2192]
gi|218771734|emb|CAW27508.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa LESB58]
gi|346058218|dbj|GAA18101.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
NCMG1179]
gi|384400594|gb|EIE46953.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392319436|gb|AFM64816.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa DK2]
gi|404522632|gb|EKA33112.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa ATCC
14886]
gi|451755827|emb|CCQ87226.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 18A]
Length = 340
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|170289948|ref|YP_001736764.1| cytochrome-c3 hydrogenase subunit gamma [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174028|gb|ACB07081.1| 2-polyprenylphenol hydroxylase-related flavodoxin oxidoreductase
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 294
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 49 VRQDTTVWTPTPLAEISP--AAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPT 106
++++ + P + E++ + E LF + + D S + GQ++Q+ V VG+ T
Sbjct: 3 LQEEQFIPKPAEILEVNDMTSIEKLFRLKL--MDEELERSFNYMPGQFVQVSVYGVGEAT 60
Query: 107 FLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPD 166
S + G E LV+ V G L LK+GD+V I G F VD ++ D
Sbjct: 61 ISICKS----KTRPGPLELLVRRV-GRVTNALHRLKEGDIVGIRGPFGNWFPVDEMEGHD 115
Query: 167 EYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKRMAYQDK 216
VLI A G GI+P+R +++ ++ + +V L YG + + ++D+
Sbjct: 116 ----VLIIAGGLGIAPVRGVLQHVLDNRGKYGEVNLLYGVKGYEETLFKDE 162
>gi|153002067|ref|YP_001367748.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS185]
gi|373948268|ref|ZP_09608229.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS183]
gi|386325887|ref|YP_006022004.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella baltica BA175]
gi|151366685|gb|ABS09685.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS185]
gi|333820032|gb|AEG12698.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
BA175]
gi|373884868|gb|EHQ13760.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS183]
Length = 405
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 239 AGKMSSYIFNLKAGDTVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 292
Query: 191 FSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 293 LKSKKTTRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 352
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 353 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|318040260|ref|ZP_07972216.1| ferredoxin-NADP oxidoreductase [Synechococcus sp. CB0101]
Length = 394
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+++ G + LC ++ G V+I+ +G+ + + P DE +++ ATG+GI+P+R+ +
Sbjct: 203 ETINGVCSTFLCDIEPGAKVKITGPVGK----EMLLPADEDANIIMLATGTGIAPMRTYL 258
Query: 188 ESGFSSKERS--------DVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDG 236
F ER L+ GA + Y D F +E + +S+
Sbjct: 259 RRMFEPAEREKNGWHFKGKAWLFMGAPTTANLLYDDDFNRYEREFPENFRYTKAISREQQ 318
Query: 237 NWSGETGYVQAAFS-RAKKIF----NPQGTGVVLCGQKQM 271
N +G Y+Q S A++IF NP+ T V +CG + M
Sbjct: 319 NANGGRMYIQDRVSENAEEIFSWIENPK-THVYMCGLRGM 357
>gi|419828456|ref|ZP_14351947.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-1A2]
gi|424636567|ref|ZP_18074581.1| hypothetical protein VCHC55A1_1667 [Vibrio cholerae HC-55A1]
gi|408025258|gb|EKG62324.1| hypothetical protein VCHC55A1_1667 [Vibrio cholerae HC-55A1]
gi|408623529|gb|EKK96483.1| oxidoreductase FAD-binding domain protein [Vibrio cholerae HC-1A2]
Length = 579
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAE--VLCGLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G + L+ G +
Sbjct: 286 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 342
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 343 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 397
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 398 EQDIPCQAELDALAKQHAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 455
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 456 CGPDGFMQKAKNLLLKQGVA 475
>gi|255292968|dbj|BAH90066.1| ferredoxin oxidoreductase [uncultured bacterium]
Length = 354
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQ-DTTVWTPT---PLAEISPAAESLFHVSIDISDAPDIA 85
P + +R TLA A Q D T+ P A+I P + V+ P I
Sbjct: 61 PFALMDFERDEGKTLACCATLQSDATIEADIDDEPDAQIIPMRDFEATVARIEQLTPTIK 120
Query: 86 SSHTR--------AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TA 135
+ H R AGQY+Q+++ V +IA+ P S E V+ V G T
Sbjct: 121 ALHLRLDQPIRYQAGQYVQVQIPGVEGGRAFSIANAPGADGQSSEIELNVRQVPGGAGTT 180
Query: 136 EVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKE 195
+ L++G +++S GR F P ++ A GSG+S R++I +S
Sbjct: 181 WLHESLQEGARLQLSGPYGRFFVRRSAAMP-----MVFMAGGSGLSSPRAMILELLASGC 235
Query: 196 RSDVRLYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQP---DGNWSGETGYVQAAFS 250
+ L YG R+ + + Y +F+ + VP LSQ DG W G G+V A +
Sbjct: 236 TQPITLVYGQRSAQELYYDAEFRALAARHPHFTYVPALSQAADSDG-WDGARGFVHEA-A 293
Query: 251 RAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
RA + G LCG M E ++
Sbjct: 294 RAHFGGSFAGHKAYLCGPPPMIEACIGTLM 323
>gi|160876785|ref|YP_001556101.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS195]
gi|378709998|ref|YP_005274892.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella baltica OS678]
gi|418022111|ref|ZP_12661098.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS625]
gi|160862307|gb|ABX50841.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS195]
gi|315268987|gb|ADT95840.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS678]
gi|353538336|gb|EHC07891.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS625]
Length = 405
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 239 AGKMSSYIFNLKAGDTVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 292
Query: 191 FSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 293 LKSKKTTRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 352
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 353 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|51242285|gb|AAT99087.1| DmpP [Pseudomonas putida]
Length = 353
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ L + V ++A+PPS + E V+ V G +T + LK GD V
Sbjct: 133 QAGQYINLTLPGVEGSRAFSLANPPS---RNDEVELHVRLVEGGAATGFIHKQLKVGDAV 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYG 204
E+S G+ F D Q D ++ A GSG+S +S+I ER D R L+ G
Sbjct: 190 ELSGPYGQFFVRDS-QAGD----LIFIAGGSGLSSPQSMI---LDLLERGDTRRITLFQG 241
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQ- 259
ARN + + F+E + VP L+Q D W G G+V A AK F+ +
Sbjct: 242 ARNRAELYNCELFEELAARHPNFSYVPALNQANDDPEWQGFKGFVHDA---AKAHFDGRF 298
Query: 260 -GTGVVLCG 267
G LCG
Sbjct: 299 GGHKAYLCG 307
>gi|126173174|ref|YP_001049323.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS155]
gi|153001942|ref|YP_001367623.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS185]
gi|160876664|ref|YP_001555980.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS195]
gi|217974517|ref|YP_002359268.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS223]
gi|373948396|ref|ZP_09608357.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS183]
gi|378709875|ref|YP_005274769.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella baltica OS678]
gi|386325759|ref|YP_006021876.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica BA175]
gi|386339934|ref|YP_006036300.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS117]
gi|125996379|gb|ABN60454.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS155]
gi|151366560|gb|ABS09560.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS185]
gi|160862186|gb|ABX50720.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS195]
gi|217499652|gb|ACK47845.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS223]
gi|315268864|gb|ADT95717.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS678]
gi|333819904|gb|AEG12570.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica BA175]
gi|334862335|gb|AEH12806.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS117]
gi|373884996|gb|EHQ13888.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS183]
Length = 418
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 252 CGKMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQ 305
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
+ + + +YGAR+ + M Y + F + V ++ QP+ NW G TG++
Sbjct: 306 LKRLQSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFI 365
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 366 HNVLYENYLKNHDAPEDCEFYMCGPPMMNAAVIGMLKNLGVEDENIL 412
>gi|167034303|ref|YP_001669534.1| oxidoreductase FAD-binding subunit [Pseudomonas putida GB-1]
gi|166860791|gb|ABY99198.1| Oxidoreductase FAD-binding domain protein [Pseudomonas putida GB-1]
Length = 353
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 59 TPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS 118
T L E+SP + H+ +D A +AGQY+ L++ + ++A+PP A
Sbjct: 110 TQLVELSPTIRGV-HLKLDRPMA-------FQAGQYVNLQLPGIEGSRAFSLANPPQQAD 161
Query: 119 ASGAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFAT 176
E V+ V G +T + LK GD + +S G+ F V QP D ++ A
Sbjct: 162 E---VELHVRLVEGGVATGYIHQQLKVGDALALSGPYGQ-FFVRGSQPGD----LIFIAG 213
Query: 177 GSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ- 233
GSG+S +S+I + + + L+ GAR + ++ F+ + VP LSQ
Sbjct: 214 GSGLSSPQSMILDLLARGDTRRITLFQGARTRAELYNRELFEALAERHANFSYVPALSQA 273
Query: 234 -PDGNWSGETGYVQAAFSRAKKIFNPQGTG--VVLCGQKQMAEEVTSIVL 280
D W G GYV A A++ F+ + G LCG M + + ++
Sbjct: 274 AEDEQWQGVRGYVHDA---ARQHFDGRFNGHKAYLCGPPPMIDAAITCLM 320
>gi|357018896|ref|ZP_09081156.1| flavodoxin oxidoreductase [Mycobacterium thermoresistibile ATCC
19527]
gi|356481217|gb|EHI14325.1| flavodoxin oxidoreductase [Mycobacterium thermoresistibile ATCC
19527]
Length = 294
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEI 149
R GQ++ L +G+ ++++ P+ G F ++ V G+ + LC G + +
Sbjct: 57 RPGQFMMLYAFGIGE-IAISVSGDPTLTD--GTFTHTIREV-GAVSRALCHAGPGSTIGL 112
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSK-ERSDVRLYYGARNL 208
G + + D ++I A G G++P+R ++ + + + + L GAR
Sbjct: 113 RGPFGTDWGLSACAGRD----LVIVAGGVGLAPLRPVVLGALAHRADYGRLVLIAGARFR 168
Query: 209 KRMAYQDKFKEWESS-GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ W + +++ + P W GE G V R + +P T LCG
Sbjct: 169 DDFLFAADLTAWAADPALEVALTVDVPVQGWPGEVGLVTEPLRRLE--LDPTRTAAFLCG 226
Query: 268 QKQMAEEVTSIVLAEGVSSEKI 289
+ M + +LA+GV +E I
Sbjct: 227 PEPMMRHSAAALLAKGVPAENI 248
>gi|238795611|ref|ZP_04639126.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
mollaretii ATCC 43969]
gi|238720730|gb|EEQ12531.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
mollaretii ATCC 43969]
Length = 407
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDRVVISGPFGEFFA------KDTNAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV + I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDDNIM 401
>gi|403731203|ref|ZP_10949243.1| putative phenol hydroxylase reductase component [Gordonia
rhizosphera NBRC 16068]
gi|403202266|dbj|GAB93574.1| putative phenol hydroxylase reductase component [Gordonia
rhizosphera NBRC 16068]
Length = 343
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 63 EISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGA 122
EI A+ +++ + D + + AGQY+++ V G+ ++A+PP +
Sbjct: 113 EIREVADDTVALTVRLDDPLEFS-----AGQYVEITVPGTGEVRQYSMANPPR---SDDH 164
Query: 123 FEFLVKSVAGSTAE---VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSG 179
EF V+ V G A + L +G VE+ RG D + D +++ A G+G
Sbjct: 165 LEFHVRRVGGGLATDGWIFDSLAEGHAVEM-----RGPWGDFVHDADADGPMILLAGGTG 219
Query: 180 ISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES-----SGVKIVPVLSQP 234
++P++S+ ++ LY+G R + Y +F WES GV P LS+
Sbjct: 220 LAPLKSIALHALELDPEREIHLYHGVRYRSDL-YDVEF--WESLADRHPGVHYTPCLSRE 276
Query: 235 DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAE 273
+G G GYV + + +G LCG M +
Sbjct: 277 EG--FGRHGYVGDVL--VEDFDSLRGFSAYLCGPPAMVD 311
>gi|212557155|gb|ACJ29609.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Shewanella piezotolerans WP3]
Length = 390
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 110 IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
IA+PP+ K G + + LK GD V IS G F E
Sbjct: 214 IATPPN-----------DKVAPGKMSSYIFNLKAGDKVTISGPFGEFFV-------KETD 255
Query: 170 TVLIF-ATGSGISPIRSLIESGFSSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKI 227
+IF G+G++P+RS I SK+ + + +YGAR+ + + YQ+ F +
Sbjct: 256 AEMIFVGGGAGMAPMRSHIFDQLKSKKTQRKMSFWYGARSTREVFYQEDFDMLAAENENF 315
Query: 228 V--PVLSQ--PDGNWSGETGYVQAA----FSRAKKIFNPQGTGVVLCGQKQMAEEVTSIV 279
V LS P+ NW+G TG++ + R K P+ +CG M V +++
Sbjct: 316 VWHVALSDPLPEDNWTGYTGFIHNVLFENYLRDHKA--PEDCEFYMCGPPIMNSSVINLL 373
Query: 280 LAEGVSSEKIL 290
+ GV E IL
Sbjct: 374 ESLGVEPENIL 384
>gi|153801381|ref|ZP_01955967.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124123047|gb|EAY41790.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 662
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 369 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 425
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 426 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 480
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 481 EQDIPCQAELDALAKQYAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 538
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 539 CGPDGFMQKAKNLLLKQGVA 558
>gi|322515065|ref|ZP_08068073.1| Na(+)-translocating NADH-quinone reductase subunit F
[Actinobacillus ureae ATCC 25976]
gi|322118945|gb|EFX91122.1| Na(+)-translocating NADH-quinone reductase subunit F
[Actinobacillus ureae ATCC 25976]
Length = 409
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKAGDKVTISGPFGEFFAKDTDNE------MVFIGGGAGMAPMRSHIFDQL 297
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGETGYVQ 246
K + + +YGAR+ + + YQ+ F + E+ LS P+ NW+G TG++
Sbjct: 298 KRLKSKRKMSFWYGARSKREIFYQEDFDQLAVENDNFVWHVALSDALPEDNWTGYTGFIH 357
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 358 NVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGMLKSLGVEDENIL 403
>gi|409892936|gb|AFV46128.1| CDP-6-deoxy-delta-3,4-glucoseen reductase [Yersinia similis]
Length = 334
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 107 PCKLDSIKFVGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 159
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 160 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 212
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 213 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 268
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 269 VSGDDSIWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 323
Query: 288 KILKN 292
K +
Sbjct: 324 KFFSD 328
>gi|424658954|ref|ZP_18096205.1| hypothetical protein VCHE16_1112 [Vibrio cholerae HE-16]
gi|408053716|gb|EKG88720.1| hypothetical protein VCHE16_1112 [Vibrio cholerae HE-16]
Length = 592
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 299 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 355
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 356 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 410
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 411 EQDIPCQAELDALAKQHAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 468
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 469 CGPDGFMQKAKNLLLKQGVA 488
>gi|359449593|ref|ZP_09239081.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20480]
gi|358044586|dbj|GAA75330.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20480]
Length = 280
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
G + + LK+GD V IS G FA E ++F G+G++P+RS I
Sbjct: 114 CGKMSSYIWSLKEGDKVTISGPFGEFFA-------KETDAEMVFVGGGAGMAPMRSHIFD 166
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGY 244
+ + +YGAR+ + M Y + F + V LS QP+ NW G TG+
Sbjct: 167 QLKRLNSKRKMSFWYGARSKREMFYVEDFDGLAAENDNFVWHTALSDPQPEDNWEGYTGF 226
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V +++ GV E IL
Sbjct: 227 IHNVLFENYLKDHEAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIL 274
>gi|107101960|ref|ZP_01365878.1| hypothetical protein PaerPA_01003007 [Pseudomonas aeruginosa PACS2]
gi|296389065|ref|ZP_06878540.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa PAb1]
gi|416874438|ref|ZP_11918137.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 152504]
gi|421160366|ref|ZP_15619433.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa ATCC
25324]
gi|334843251|gb|EGM21843.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 152504]
gi|404544699|gb|EKA53836.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa ATCC
25324]
Length = 340
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|126173005|ref|YP_001049154.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
baltica OS155]
gi|386339803|ref|YP_006036169.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella baltica OS117]
gi|125996210|gb|ABN60285.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS155]
gi|334862204|gb|AEH12675.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella baltica
OS117]
Length = 405
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 239 AGKMSSYIFNLKAGDTVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 292
Query: 191 FSSKERS-DVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 293 LKSKKTTRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 352
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 353 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|409388301|ref|ZP_11240278.1| putative phenol hydroxylase reductase component [Gordonia
rubripertincta NBRC 101908]
gi|403201375|dbj|GAB83512.1| putative phenol hydroxylase reductase component [Gordonia
rubripertincta NBRC 101908]
Length = 318
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE---VLCGLKKGDVV 147
AGQY++L V + ++A+PPS EF ++ G A + L GD V
Sbjct: 112 AGQYVELAVPGTLETRPYSMANPPSEPDR---LEFHIRRQPGGLATEGWIFESLDVGDPV 168
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F +P + +++ A G+G++P++++ + ++ +Y+G R
Sbjct: 169 TMCGPWGD-FC---YEPAESGVGLVLLAGGTGLAPLKAIARAALQDDPEREIHVYHGVRT 224
Query: 208 LKRMAYQDKFKEWESS---GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVV 264
+ Y F E SS GV+ +P LS+ WSG TGYV A + + + +
Sbjct: 225 RDEL-YDVDFWEGLSSTHPGVRYIPCLSRE--QWSGRTGYVGDAM--MEDLPSCRNHAAY 279
Query: 265 LCGQKQMAE 273
LCG M E
Sbjct: 280 LCGPPAMVE 288
>gi|421355627|ref|ZP_15805958.1| hypothetical protein VCHE45_3005 [Vibrio cholerae HE-45]
gi|395950297|gb|EJH60916.1| hypothetical protein VCHE45_3005 [Vibrio cholerae HE-45]
Length = 605
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 312 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 368
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 369 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 423
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + A S K+I + V +
Sbjct: 424 EQDIPCQAELDALAKQHAGLTLIYALTQPSAEWQGEHGRL--ALSHIKRIPDLPARQVFV 481
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 482 CGPDGFMQKAKNLLLKQGVA 501
>gi|383784202|ref|YP_005468771.1| oxidoreductase FAD/NAD(P)-binding [Leptospirillum ferrooxidans
C2-3]
gi|383083114|dbj|BAM06641.1| putative oxidoreductase FAD/NAD(P)-binding [Leptospirillum
ferrooxidans C2-3]
Length = 247
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 91 AGQYLQLRVVDV----GKPTFLA--IASPPSFASASGAFEFLVKSVA--GSTAEVLCGLK 142
AGQ+L + D G+P A IAS P G + + V G + + K
Sbjct: 37 AGQFLMASIPDFLREDGRPVRRAYSIASSP-LDLMEGYLDLTITRVGEGGYFSNRIHESK 95
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSDVRL 201
D+V I G+ F + PP+ +P +F +GSGI+P+R++I + + L
Sbjct: 96 VDDIVLIEGPYGKAFHLA--YPPERFPERYLFVGSGSGIAPLRAMIRTLLKEGCPVPIEL 153
Query: 202 YYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGN---WSGETGYVQAAFSRAKKIFNP 258
+YG R + Y+++ KEW GV + +S + +SG G V + +N
Sbjct: 154 FYGYRYVSDCIYEEEIKEWMKKGVSVHLAISGSVSSGQVFSGAYGRVTSILPELIPSYN- 212
Query: 259 QGTGVVLCGQKQMAEE 274
G V +CG M E+
Sbjct: 213 -GQEVFICGPPAMVEQ 227
>gi|195627630|gb|ACG35645.1| ferredoxin--NADP reductase, leaf isozyme [Zea mays]
Length = 335
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 149 VKGVCSNFLCDLKPGAEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 204
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 205 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 263
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I+L
Sbjct: 264 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIML 307
>gi|167623580|ref|YP_001673874.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
halifaxensis HAW-EB4]
gi|167353602|gb|ABZ76215.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella halifaxensis
HAW-EB4]
Length = 405
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F ++ D ++ G+G++P+RS I +
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFNQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
K + + +YGAR+ + + YQD F + V LS P+ NW+G TG++
Sbjct: 294 KGVKTKRKMSFWYGARSTREVFYQDDFDALAAENDNFVWHVALSDPLPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ + GV E IL
Sbjct: 354 NVLFENYLKNHKAPEDCEFYMCGPPIMNSSVIALLESLGVEPENIL 399
>gi|420139781|ref|ZP_14647599.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa CIG1]
gi|403247466|gb|EJY61104.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa CIG1]
Length = 340
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|354613297|ref|ZP_09031222.1| Ferredoxin--NAD(+) reductase [Saccharomonospora paurometabolica YIM
90007]
gi|353222339|gb|EHB86652.1| Ferredoxin--NAD(+) reductase [Saccharomonospora paurometabolica YIM
90007]
Length = 348
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 12/205 (5%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQY+ + V + ++A+ ++ +G EF++K K DV +
Sbjct: 141 GQYVDIAVPGTDEARSFSMAN---VSADTGELEFVIKVYPDGLFSTFLA-DKVDVGDRLD 196
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRM 211
+ G F V ++ E V + G+G++PI SL+ R YYGAR+ + +
Sbjct: 197 LTGP-FGVFTLREAPEKELVFV-GGGAGMAPILSLLRQMAELGLDRPTRFYYGARSRRDL 254
Query: 212 AYQDKFKEWESS--GVKIVPVLSQP--DGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
++++ + E + + VP LS+P D W GETG + R + + G +CG
Sbjct: 255 CFENELRGLERTLPDFRYVPALSEPAADDGWDGETGLITDVVRRCEG--DLTGADAYVCG 312
Query: 268 QKQMAEEVTSIVLAEGVSSEKILKN 292
M E ++ A GV ++ +
Sbjct: 313 PPPMVEAAVELLPALGVDDGRVFYD 337
>gi|117924190|ref|YP_864807.1| oxidoreductase FAD-binding subunit [Magnetococcus marinus MC-1]
gi|117607946|gb|ABK43401.1| Oxidoreductase FAD-binding domain protein [Magnetococcus marinus
MC-1]
Length = 283
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 67 AAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFL 126
A +LF +++ + + GQ++ L V+ G+ F S A+ +
Sbjct: 20 ADTALFQLALADGRGVGPNGMNHKPGQFVMLSVLGAGEAPF----SICHAAAQVPILQLC 75
Query: 127 VKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSL 186
++ V G E L L G V + G GF + R++ D VL+ A G G++P+RS+
Sbjct: 76 IRRV-GRVTERLFELSPGSKVGLRGPYGNGFPLQRMEDHD----VLLVAGGLGMAPLRSV 130
Query: 187 IESGFSSKERSD-VRLYYGARNLKRMAYQDKFKEWESSG---VKIVPVLSQPDGNWSGET 242
++ +++ R V L YG RN + M + ++ + SG + + QP +S
Sbjct: 131 LQGVLANRPRYHRVMLAYGFRNPQEMLFGEELQGLAQSGAVELHLAVDQPQPGQAFSAMQ 190
Query: 243 GYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
G+V P T V LCG M + ++ +GV +K F
Sbjct: 191 GHVGQLVE--GLTLEPARTTVALCGPPVMYQGTAEMLRNKGVWPQKTFMTF 239
>gi|296113675|ref|YP_003627613.1| NADH:ubiquinone oxidoreductase Na(+)-translocating subunit F
[Moraxella catarrhalis RH4]
gi|295921369|gb|ADG61720.1| NADH:ubiquinone oxidoreductase Na(+)-translocating subunit F
[Moraxella catarrhalis BBH18]
Length = 411
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IASPP A S G + + LK GD + +S G FA D
Sbjct: 230 IRIASPPPRAPESIP--------PGKMSSYVFSLKPGDKITVSGPYGEFFAKDTDA---- 277
Query: 168 YPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKF----KEWES 222
++ G+G++P+RS I K + +YGAR+ + M Y + + +E+++
Sbjct: 278 --EMVFIGGGAGMAPMRSHIFDQLKRLKSTRKISFWYGARSKREMFYVEDYDGLAEEFDN 335
Query: 223 SGVKIVPVLSQPDGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
+ QP+ NW G TG++ + K P+ +CG M V S++
Sbjct: 336 FEWHVALSDPQPEDNWEGYTGFIHNVLYENYLKDHPAPEDCEFYMCGPPVMNAAVISMLK 395
Query: 281 AEGVSSEKIL 290
+ GV E IL
Sbjct: 396 SLGVEDENIL 405
>gi|242059967|ref|XP_002459129.1| hypothetical protein SORBIDRAFT_03g046340 [Sorghum bicolor]
gi|241931104|gb|EES04249.1| hypothetical protein SORBIDRAFT_03g046340 [Sorghum bicolor]
Length = 368
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 182 VKGVCSNFLCDLKPGSEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 237
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 238 MF-FEEHEDYKYTGLAWLFLGVPTSDTLLYKEELEKMKEMAPENFRLDFAVSREQTNAAG 296
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I++
Sbjct: 297 EKMYIQTRMAEYKEELWELLKKDNTYVYMCGLKGMEKGIDDIMV 340
>gi|2605613|dbj|BAA23335.1| DMS oxygenase component [Acinetobacter sp.]
Length = 353
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ +++ ++ +IA+ PS A+ E ++ V G +T V L G+ +
Sbjct: 133 QAGQYINIQLPNIEGTRAFSIANTPSEANL---IELHIRKVQGGAATRYVHDELSVGEEM 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+S G+ F ++ D+ V+ A GSG+S +S+I + + L+ GAR+
Sbjct: 190 ALSGPYGQFF----VRKSDQ-QNVIFIAGGSGLSSPQSMILDLLEQGDTRIIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQGTG- 262
+ + ++KF++ E + +P L+ +P+ W+G TGYV A + F + +G
Sbjct: 245 VAELYNREKFEQLVKEYPNFRYIPALNAPKPEDQWTGFTGYVHEAVA---NYFENKCSGH 301
Query: 263 -VVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPPMIDAAISTLM 320
>gi|116050458|ref|YP_790723.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|313107410|ref|ZP_07793601.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 39016]
gi|386066448|ref|YP_005981752.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
NCGM2.S1]
gi|421174343|ref|ZP_15632073.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa CI27]
gi|115585679|gb|ABJ11694.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|310880103|gb|EFQ38697.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa 39016]
gi|348035007|dbj|BAK90367.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa
NCGM2.S1]
gi|404534397|gb|EKA44133.1| anthranilate dioxygenase reductase [Pseudomonas aeruginosa CI27]
Length = 340
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSV-AGSTAEVL-CGLKKGDVVEI 149
GQY +L+V + A+ P+ +FL++ + G+ ++ L G + GD +
Sbjct: 140 GQYARLQVPGSDCRRAYSFANRPN---PQNHLQFLIRLLPGGAMSDYLRQGCRVGDEIRF 196
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLK 209
+G F + +++ P +L+ A G+G+S +++ V LYYG R
Sbjct: 197 EAPLGT-FYLRQVERP-----LLLVAGGTGLSAFLGMLDELAERGCERPVHLYYGVRRAA 250
Query: 210 RMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+ + + G + VPVLS+ D +W G GY+ F A+ + + LCG
Sbjct: 251 DLCELQRIAGYAERLPGFRFVPVLSEADADWDGRRGYLHEHFDAAR--LRDEAFDLYLCG 308
Query: 268 QKQMAEEV 275
M E V
Sbjct: 309 PPPMVEAV 316
>gi|238759715|ref|ZP_04620874.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
aldovae ATCC 35236]
gi|238702041|gb|EEP94599.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
aldovae ATCC 35236]
Length = 407
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENENFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV + I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDDNIM 401
>gi|254504657|ref|ZP_05116808.1| NADH:ubiquinone oxidoreductase, F subunit [Labrenzia alexandrii
DFL-11]
gi|222440728|gb|EEE47407.1| NADH:ubiquinone oxidoreductase, F subunit [Labrenzia alexandrii
DFL-11]
Length = 406
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 AGKMSSYIFNLKPGDEVTISGPFGEFFARDTKK------EMVFVGGGAGMAPMRSHIFDQ 293
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQ--PDGNWSGETGYV 245
K V +YGAR+ + M Y + F E E+ + LS P+ +W G TG++
Sbjct: 294 MRRIKTDRKVTFWYGARSKREMFYVEDFDMLERENENFEWHVALSDAVPEDDWKGYTGFI 353
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M + V +++L GV E I+
Sbjct: 354 HNVLYDEYLKDHPAPEDCEFYMCGPPIMNQSVINMLLDLGVDREDIM 400
>gi|149919831|ref|ZP_01908307.1| Na(+)-translocating NADH-quinone reductase subunit F [Plesiocystis
pacifica SIR-1]
gi|149819278|gb|EDM78711.1| Na(+)-translocating NADH-quinone reductase subunit F [Plesiocystis
pacifica SIR-1]
Length = 421
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK+GD V IS G +A E ++F G+G++P+RS I
Sbjct: 257 GKMSSYIFNLKEGDKVTISGPYGEFYA-------RETDAEMVFIGGGAGMAPMRSHIFDQ 309
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
F K V +YGAR+L+ Y D F +E+ + + P+ NW G TG++
Sbjct: 310 FKRIKTERKVSFWYGARSLREAFYIDHFDGIAEEFPNFNWTLALSDPLPEDNWEGPTGFI 369
Query: 246 QAAFSR--AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
A K P+ +CG M + V + L GV E ++
Sbjct: 370 HAVCRELYLDKHEAPEDCEFYICGPPMMNQAVIQMALELGVEPENVM 416
>gi|427930675|pdb|3VO2|A Chain A, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
gi|427930676|pdb|3VO2|B Chain B, Crystal Structure Of Zea Mays Leaf Ferredoxin-Nadp+
Reductase Iii
Length = 310
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D TV++ ATG+GI+P RS +
Sbjct: 124 VKGVCSNFLCDLKPGADVKITGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFLWK 179
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQ---DKFKEWESSGVKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+ +K KE ++ +S+ N +G
Sbjct: 180 MF-LEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTNAAG 238
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + + ++ T V +CG K M + + I+L
Sbjct: 239 EKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGIDDIML 282
>gi|33151612|ref|NP_872965.1| Na(+)-translocating NADH-quinone reductase subunit F [Haemophilus
ducreyi 35000HP]
gi|71152044|sp|Q7VNU4.1|NQRF_HAEDU RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|33147832|gb|AAP95354.1| Na+-translocating NADH-ubiquinone oxidoreductase, subunit F
[Haemophilus ducreyi 35000HP]
Length = 409
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDNEMVFIGGGAGMAPMRSHIFDQ 296
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYV 245
K + + +YGAR+ + M Y + F + E+ K LS P + NW G TG++
Sbjct: 297 LKRLKSKRKMSFWYGARSKREMFYVEDFDQLQAENDNFKWHVALSDPLPEDNWDGYTGFI 356
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 357 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGMLKSLGVEDENIL 403
>gi|416157637|ref|ZP_11605259.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 101P30B1]
gi|416215825|ref|ZP_11623338.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 7169]
gi|416222809|ref|ZP_11626262.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 103P14B1]
gi|416229268|ref|ZP_11627988.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 46P47B1]
gi|416242716|ref|ZP_11633685.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis BC7]
gi|416251463|ref|ZP_11637731.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis CO72]
gi|416256001|ref|ZP_11639478.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis O35E]
gi|326562418|gb|EGE12737.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 7169]
gi|326562787|gb|EGE13082.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 46P47B1]
gi|326563491|gb|EGE13754.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 103P14B1]
gi|326570612|gb|EGE20648.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis BC7]
gi|326572986|gb|EGE22965.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis CO72]
gi|326573800|gb|EGE23757.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis 101P30B1]
gi|326574776|gb|EGE24710.1| Na(+)-translocating NADH-quinone reductase subunit F [Moraxella
catarrhalis O35E]
Length = 411
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 108 LAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDE 167
+ IASPP A S G + + LK GD + +S G FA D
Sbjct: 230 IRIASPPPRAPESIP--------PGKMSSYVFSLKPGDKITVSGPYGEFFAKDTDA---- 277
Query: 168 YPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNLKRMAYQDKF----KEWES 222
++ G+G++P+RS I K + +YGAR+ + M Y + + +E+++
Sbjct: 278 --EMVFIGGGAGMAPMRSHIFDQLKRLKSTRKISFWYGARSKREMFYVEDYDGLAEEFDN 335
Query: 223 SGVKIVPVLSQPDGNWSGETGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVL 280
+ QP+ NW G TG++ + K P+ +CG M V S++
Sbjct: 336 FEWHVALSDPQPEDNWEGYTGFIHNVLYENYLKDHPAPEDCEFYMCGPPVMNAAVISMLK 395
Query: 281 AEGVSSEKIL 290
+ GV E IL
Sbjct: 396 SLGVEDENIL 405
>gi|392541664|ref|ZP_10288801.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas piscicida JCM 20779]
gi|409201436|ref|ZP_11229639.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas flavipulchra JG1]
Length = 408
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 CGKMSSYIWSLKEGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYV 245
+ + +YGAR+ + M Y + F E+ + LS QP+ NW G TG++
Sbjct: 296 LKRLNSKRKMSFWYGARSKREMFYVEDFDGLAEENDNFQWHVALSDPQPEDNWEGYTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 356 HNVLFENYLKDHEAPEDCEFYMCGPPMMNAAVINMLKDLGVEDENIL 402
>gi|330826043|ref|YP_004389346.1| ferredoxin--NAD(+) reductase [Alicycliphilus denitrificans K601]
gi|329311415|gb|AEB85830.1| Ferredoxin--NAD(+) reductase [Alicycliphilus denitrificans K601]
Length = 353
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 28/247 (11%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHT 89
PL + + R++ +A +R+ P ++ ++ A+ + V + + P S
Sbjct: 89 PLTDVVLESRQVTDESAYPIRK-----LPVRVSALTRASHDVMQVRLQL---PANDSFRY 140
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + + ++A+ P ++ E ++ + G T V +K+ +++
Sbjct: 141 HAGQYIEFILRDGARRAY-SMATAPHMQESAPGVELHIRHMPGGKFTTHVFGDMKEKEIL 199
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYG 204
+ G F + P ++ A+G+G +PI++LIE + + VR LY+G
Sbjct: 200 RVEGPFGSFFLREDSDKP-----MVFLASGTGFAPIKALIE---HMQHKDIVRPATLYWG 251
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + + +E ++ ++ VPV+S P+ W+G TG+V A + I + G
Sbjct: 252 GRRPQDLYMDGWVRERLAAMPQLRYVPVVSDALPEDGWTGRTGFVHQAV--MEDIADLSG 309
Query: 261 TGVVLCG 267
V CG
Sbjct: 310 HQVYACG 316
>gi|78184326|ref|YP_376761.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. CC9902]
gi|78168620|gb|ABB25717.1| ferredoxin--NADP reductase (FNR) [Synechococcus sp. CC9902]
Length = 398
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
+ + G + LC ++ G V+I+ +G+ + + P DE +++ ATG+GI+P+R+ +
Sbjct: 207 EQIYGVCSSYLCDIEPGTKVKITGPVGK----EMLLPEDEDANIIMLATGTGIAPMRTYL 262
Query: 188 ESGFSSKERS--------DVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDG 236
F SKER L+ GA + Y D F + + +S+ +
Sbjct: 263 RRMFESKERKANGWSFKGKAWLFMGAPKTANLLYDDDFNNYLKEYPDNFRYTKAISREEQ 322
Query: 237 NWSGETGYVQAAFS-RAKKIF----NPQGTGVVLCGQKQM 271
N G Y+Q S A +IF +P+ T V +CG + M
Sbjct: 323 NSKGGRMYIQDRVSEHADEIFAMIEDPK-THVYMCGLRGM 361
>gi|381395394|ref|ZP_09921094.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola punicea DSM 14233 = ACAM 611]
gi|379328921|dbj|GAB56227.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Glaciecola punicea DSM 14233 = ACAM 611]
Length = 410
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIES 189
AG + + L GD V IS G FA D E V + G+G++P+RS L +
Sbjct: 244 AGIMSSFIWSLTPGDKVTISGPFGEFFAKDT-----EAEMVFV-GGGAGMAPMRSHLFDQ 297
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
K + +YGAR+ + M Y + F KE E+ + QP+ W G+TG++
Sbjct: 298 LRRLKSERKISFWYGARSSREMFYVEDFDMLQKENENFKWHVALSDPQPEDKWEGDTGFI 357
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M V S++ GV E I+
Sbjct: 358 HNVLLEKYLKDHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 404
>gi|238752548|ref|ZP_04614022.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
rohdei ATCC 43380]
gi|238709223|gb|EEQ01467.1| Na(+)-translocating NADH-quinone reductase subunit F [Yersinia
rohdei ATCC 43380]
Length = 407
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENENFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV + I+
Sbjct: 356 NVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDDNIM 401
>gi|110807466|ref|YP_690986.1| FMN reductase [Shigella flexneri 5 str. 8401]
gi|424839848|ref|ZP_18264485.1| FMN reductase [Shigella flexneri 5a str. M90T]
gi|110617014|gb|ABF05681.1| NAD(P)H-flavin reductase [Shigella flexneri 5 str. 8401]
gi|383468900|gb|EID63921.1| FMN reductase [Shigella flexneri 5a str. M90T]
Length = 244
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 29 IPLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSH 88
+P L ++ QR+R+ TL+ T +A I+ ++++ V I PD A S
Sbjct: 1 MPYLSIR-QRKRMTTLSCKV----------TSVAAIT---DTVYRVRI----VPDAAFSF 42
Query: 89 TRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV--KSVAGSTAEVLCGLKKGDV 146
RAGQYL + + + K F ++AS P G E + + V+ + K
Sbjct: 43 -RAGQYLMVVMDERDKRPF-SMASTPD---EKGFIELHIGASEINLYAKAVMDRILKDHQ 97
Query: 147 VEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGAR 206
+ + G + ++ +E P +LI A G+G S RS++ + + D+ +Y+G R
Sbjct: 98 IVVDLPHGEAW----LRDDEERPMILI-AGGTGFSYARSILLTALARNPNRDITIYWGGR 152
Query: 207 NLKRMAYQDKFK--EWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT--- 261
+ + + + + G+++VPV+ QP+ W G TG V A + GT
Sbjct: 153 EEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTGTVLTA------VLQDHGTLAE 206
Query: 262 -GVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + G+ +MA+ + +E + E L
Sbjct: 207 HDIYIAGRFEMAKIARDLFCSERNAREDRL 236
>gi|260362504|ref|ZP_05775430.1| NAD(P)H-flavin reductase [Vibrio parahaemolyticus K5030]
gi|308112663|gb|EFO50203.1| NAD(P)H-flavin reductase [Vibrio parahaemolyticus K5030]
Length = 207
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-----KSVAGSTAEVL-CGLKK 143
+AGQYL + + + K F +IAS P G E + + A E + L+
Sbjct: 31 KAGQYLMVVMGEKDKRPF-SIASSP--CRHEGELELHIGAAEHNAYAIEVVEAMKAALET 87
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
G+ +EI G + +Q E P +LI A G+G S +RS+++ + + + + LY+
Sbjct: 88 GNDIEIDAPHGDAW----VQEDSERPLLLI-AGGTGFSYVRSILDHCVAQNKTNPIYLYW 142
Query: 204 GARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFS 250
GAR+ ++ +D+ E + + V VPV+ + +W G+ G V A S
Sbjct: 143 GARDNCQLYAKDELLELAQKYANVHFVPVVEEAPADWQGKVGNVLQAVS 191
>gi|300778325|ref|ZP_07088183.1| phenylacetic acid degradation protein E, flavodoxin reductase
[Chryseobacterium gleum ATCC 35910]
gi|300503835|gb|EFK34975.1| phenylacetic acid degradation protein E, flavodoxin reductase
[Chryseobacterium gleum ATCC 35910]
Length = 374
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 56 WTPTPLAEISPAAESLFHVSIDISDAPDIASSHTR--AGQYLQLRVVDVGKPTF--LAIA 111
+ P +A+ ++ F + DI P+ + R AGQY+ +R GK ++
Sbjct: 13 FHPLKIAKKEQLTKNTFSLEFDI---PENVKENFRFEAGQYVSIRFQSHGKEVINDYSMT 69
Query: 112 SPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTV 171
S P S + + S G+T+++ GD++ +S+ GR V + P E+ T+
Sbjct: 70 SAPYEGKISLGIK--INSSEGATSQLFQNYNMGDILWVSEPAGRFTLVSK---PSEFRTI 124
Query: 172 LIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDK 216
+ FA G GI+PI S ++ ++ R+ + L++G ++ + Y+D+
Sbjct: 125 VAFAAGIGITPILSHFKNILHNEPRTRLFLFFGNKSSDDLVYRDQ 169
>gi|330808838|ref|YP_004353300.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376946|gb|AEA68296.1| putative oxidoreductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 346
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAE-VLCGLKKGDVVEIS 150
GQY+ + V+ G L++A+ P E +++ G ++ V +K+ D+V +
Sbjct: 143 GQYINV-VMPGGIRRSLSLANVPD----DNVLELHLRNYGGPFSQHVFNVMKENDLVRLE 197
Query: 151 QVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKR 210
+G F ++ P V + A+G+G +PI+++IE ++ LY+G R
Sbjct: 198 GPLGTFF----VREDSSKPMVFV-ASGTGFAPIKAMIERELEKASSREITLYWGGRRASD 252
Query: 211 MAYQDKFKEW-ESSGVKIVPVLSQ--PDGNWSGETGYVQAA 248
+ + W +S V +PVLS+ PD W G G+V A
Sbjct: 253 LYLSSVAEAWTKSHNVTFIPVLSEAHPDDLWEGRVGFVHRA 293
>gi|322369105|ref|ZP_08043671.1| Conserved hypohtetical protein containing oxidoreductase
FAD/NAD(P)-binding domain [Haladaptatus paucihalophilus
DX253]
gi|320551328|gb|EFW92976.1| Conserved hypohtetical protein containing oxidoreductase
FAD/NAD(P)-binding domain [Haladaptatus paucihalophilus
DX253]
Length = 241
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 127 VKSVAGSTAEVLCGLKK-GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS 185
+K TA V ++ GD +EI ++ G + D V +TG+GI+P+ +
Sbjct: 74 IKRYDDGTASVYMHDREPGDTIEIEELDGNLYLRDLDSD------VAFVSTGTGITPMMA 127
Query: 186 LIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYV 245
+++ + YG + + + Y++ + E+ + V S D +WSG TG+V
Sbjct: 128 MVKQ-YLRDGTGHATFLYGEKTQEDVMYRETLDQLEAEHENLTVVYSLSDEDWSGRTGHV 186
Query: 246 QAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
QA + +P+ T CG M E T + GV E+I
Sbjct: 187 QAHIEDV--VPDPEATDFYCCGVPGMVVETTEKLADIGVPDERI 228
>gi|194477226|ref|YP_002049405.1| ferredoxin--NADP reductase (FNR) [Paulinella chromatophora]
gi|171192233|gb|ACB43195.1| ferredoxin--NADP reductase (FNR) [Paulinella chromatophora]
Length = 381
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 123 FEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISP 182
+E +++ G + LC +K G +++ +G+ + + P DE V++ ATG+GI+P
Sbjct: 184 YEKDGETINGVCSTFLCDIKPGAKTKMTGPVGK----EMLLPADEMANVIMLATGTGIAP 239
Query: 183 IRSLIESGFSSKERS---------DVRLYYGARNLKRMAYQDKFKEWES---SGVKIVPV 230
+R+ + F ERS L+ GA + Y D F ++S +
Sbjct: 240 MRTYLRRMFEPGERSKNPEYQFRGKAWLFMGAPTTANLLYDDDFNRYQSEFPENFRYTKA 299
Query: 231 LSQPDGNWSGETGYVQAAFS-RAKKIF---NPQGTGVVLCGQKQM 271
+S+ N SG Y+Q + A +IF T V +CG + M
Sbjct: 300 ISREQQNTSGGRMYIQDRVTEHADEIFGMIEDSRTHVYMCGLRGM 344
>gi|217969247|ref|YP_002354481.1| Na(+)-translocating NADH-quinone reductase subunit F [Thauera sp.
MZ1T]
gi|217506574|gb|ACK53585.1| NADH:ubiquinone oxidoreductase, subunit F [Thauera sp. MZ1T]
Length = 407
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LKKGD V + G FA D ++ V + G+G++P+RS I
Sbjct: 242 GKMSSWVFNLKKGDKVTVYGPFGEFFARDT-----DHEMVFV-GGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+++ Y ++F + E+ K LS P + NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSMREAFYVEEFDKLAAENPNFKWHLALSDPLPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++L GV E I+
Sbjct: 356 NVLYENYLKDHPAPEDCEFYMCGPPMMNAAVIKLLLDLGVERENIM 401
>gi|406875715|gb|EKD25454.1| hypothetical protein ACD_80C00049G0003 [uncultured bacterium (gcode
4)]
Length = 233
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 91 AGQYLQLRVVDVGK--PTFLAIASPPSFASASGAFEFLVKSVAGSTA-EVLCGLKKGDVV 147
AGQ++Q + + K P +I+S P+ EF +K G A E + + G +
Sbjct: 37 AGQFVQFLIPNGEKITPRSYSISSIPT----DEYLEFCIKLHEGGLASEYIRAMNVGSSL 92
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS-DVRLYYGAR 206
+GR F +D + D Y ATG GI+PI +I S K VRL +G R
Sbjct: 93 SCKGPLGR-FVID-VNSHDHY----FVATGVGIAPIMGMIRSLIEEKNTDLPVRLLFGVR 146
Query: 207 NLKRMAYQDKFKEW--ESSGVKIVPVLSQPD--GNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + + D+ +E + S LSQP G W G G V I + G
Sbjct: 147 EEEDVFWIDRLEELKQKHSLFDYTITLSQPKPTGGWQGLKGRV------TDHILHHLGKH 200
Query: 263 -VVLCGQKQMAEEVTSIVLAEGVSSEKI 289
LCG M ++V ++++ GV +E I
Sbjct: 201 KFYLCGNAGMVKDVRALIIEHGVDAEDI 228
>gi|422020509|ref|ZP_16367047.1| FMN reductase [Providencia alcalifaciens Dmel2]
gi|414101146|gb|EKT62747.1| FMN reductase [Providencia alcalifaciens Dmel2]
Length = 233
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 88 HTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS---GAFEFLVKSVAGSTAEVLCGLKKG 144
H +AGQYL + + + K F ++P + S GA EF + ++A V+ + +
Sbjct: 30 HFKAGQYLMVVMDERDKRPFSMASTPENNQSIELHIGASEFNLYAMA-----VMDRILEQ 84
Query: 145 DVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYG 204
++I G+ + + P +++ A G+G S S++ + + + D+ Y+G
Sbjct: 85 QRIDIDIPHGKAWFRENSSNP-----MILIAGGTGFSYTHSILLAALAENPQRDITFYWG 139
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
R L+ + + + +K++PV+ QPD NW G TG V + + + G
Sbjct: 140 GRQLEHLYDLGELQAISERYPNLKVIPVVEQPDENWRGRTGTVLSTV--LEDFGDLSGHD 197
Query: 263 VVLCGQKQMAE 273
+ + G+ +MA+
Sbjct: 198 IYIAGRFEMAK 208
>gi|170769824|ref|ZP_02904277.1| NAD(P)H-flavin reductase [Escherichia albertii TW07627]
gi|170121262|gb|EDS90193.1| NAD(P)H-flavin reductase [Escherichia albertii TW07627]
Length = 233
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 64 ISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASASGAF 123
+ ++++ V I PD A S RAGQYL + + + K P S AS
Sbjct: 11 VEAITDTVYRVRI----VPDAAFSF-RAGQYLMVVMDERDK-------RPFSMASTPDEK 58
Query: 124 EFLVKSVAGSTAEVLCGLKKGDVVEISQVM-----GRGFAVDRIQPPDEYPTVLIFATGS 178
F+ + S + +++ Q++ G + ++ DE P +LI A G+
Sbjct: 59 GFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAW----LRDDDERPMILI-AGGT 113
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQPDG 236
G S RS++ + + D+ +Y+G R + + + + + SG+++VPV+ QP+
Sbjct: 114 GFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHSGLQVVPVVEQPEA 173
Query: 237 NWSGETGYVQAAFSRAKKIFNPQGT----GVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
W G TG V A + GT + + G+ +MA+ + E + E L
Sbjct: 174 GWRGRTGTVLTA------VLQDHGTLAEHDIYIAGRFEMAKIARDLFCNERSAREDRL 225
>gi|297580021|ref|ZP_06941948.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297535667|gb|EFH74501.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 662
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 92 GQYLQLRVVDVGKPT--FLAIASPPSFASASGAFEFLVKSVAGSTAEVLC--GLKKGDVV 147
GQYL + +V G+P + ++S PS G VK + G L+ G +
Sbjct: 369 GQYLPIEMVIEGEPVQRYYTLSSSPS---RPGRLAISVKRIDGGRVSNWLQENLQIGTTL 425
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
G F +D P +L+ + GSG++P+ S++ + DV Y+ R+
Sbjct: 426 TAQHPTGH-FHLDTTAPQ----PLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRS 480
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + Q + + +G+ ++ L+QP W GE G + + S K+I N V +
Sbjct: 481 EQDIPCQAELDALAKQYAGLTLIYALTQPSSQWQGEQGRL--SLSHIKRIPNLVSRQVFV 538
Query: 266 CGQKQMAEEVTSIVLAEGVS 285
CG ++ +++L +GV+
Sbjct: 539 CGPDGFMQKAKNLLLKQGVA 558
>gi|125537696|gb|EAY84091.1| hypothetical protein OsI_05475 [Oryza sativa Indica Group]
Length = 366
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ TG+GI+P RS +
Sbjct: 180 VKGVCSNFLCDLKPGSDVKITGPVGK----EMLMPKDPNATIIMLGTGTGIAPFRSFLWK 235
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKF---KEWESSGVKIVPVLSQPDGNWSG 240
F +E D R L+ G + Y+++F KE ++ +S+ N +G
Sbjct: 236 MF-FEEHDDYRFNGLAWLFLGVPTSSTLLYREEFERMKEIAPERFRLDFAVSREQTNAAG 294
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG K M + + I++
Sbjct: 295 EKMYIQTRMAEYKDELWELLKKDNTYVYMCGLKGMEKGIDDIMI 338
>gi|111017057|ref|YP_700029.1| hydrogenase/ sulfur reductase [Rhodococcus jostii RHA1]
gi|110816587|gb|ABG91871.1| probable hydrogenase/ sulfur reductase [Rhodococcus jostii RHA1]
Length = 282
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQ 151
GQ++ L VG+ ++++ PS + G +++V G+ + L +G ++ +
Sbjct: 47 GQFMMLYAHGVGE-VAISVSGDPS--ATDGTLVHTIRNV-GAVSRALHDAPRGTIIGVRG 102
Query: 152 VMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-SDVRLYYGARNLKR 210
GRG+ + P ++I A G G++P+R ++ + +++++ + L GAR
Sbjct: 103 PFGRGWTM----PTGPDRDLVIVAGGVGLAPLRPVVLAALAARDKFRRLVLVVGARTPAD 158
Query: 211 MAYQDKFKEWESSGVKIVPV-LSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQK 269
+ Y+ + W++ V V + QP W+G G+V + R +P T +LCG +
Sbjct: 159 ILYRAELGTWQARTDLTVEVTIDQPIAGWTGGVGFVTESLHRVD--LDPGRTTALLCGPE 216
Query: 270 QM 271
M
Sbjct: 217 PM 218
>gi|120600113|ref|YP_964687.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. W3-18-1]
gi|120560206|gb|ABM26133.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. W3-18-1]
Length = 403
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 237 AGKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 290
Query: 191 FSSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 291 LKSKKTKRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 350
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 351 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 397
>gi|226943582|ref|YP_002798655.1| Na(+)-translocating NADH-quinone reductase subunit F [Azotobacter
vinelandii DJ]
gi|226718509|gb|ACO77680.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating protein,
subunit F [Azotobacter vinelandii DJ]
Length = 407
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V + G FA D ++ G+G++P+RS I
Sbjct: 242 GKMSSFVFNLKPGDKVTVYGPFGEFFARDTDA------EMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + + +YGAR+L+ Y +++ + ++ L+ QP+ NW+G TG++
Sbjct: 296 KRLKSKRKMSFWYGARSLREAFYVEEYDQLQAENPNFRWHLALSDPQPEDNWTGLTGFIH 355
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M V ++L GV E IL
Sbjct: 356 NVLYENCLKDHPAPEDCEFYMCGPPMMNAAVIKMLLDLGVERENIL 401
>gi|110798571|ref|YP_696224.1| anaerobic sulfite reductase subunit B [Clostridium perfringens ATCC
13124]
gi|110673218|gb|ABG82205.1| anaerobic sulfite reductase, B subunit [Clostridium perfringens
ATCC 13124]
Length = 263
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 81 APDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLC 139
A D+ H GQ+L+L + VG+ +P S + G +F +++V T E+
Sbjct: 28 ASDVVPEH---GQFLELSLPKVGE-------APISVSGFGPGYLDFTIRAVGKVTDEIF- 76
Query: 140 GLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSD- 198
LK GD + + G+G+ V++ + + V+I A G+G++P+RSLI + +
Sbjct: 77 KLKPGDKISLRGAYGKGWPVEQFKNKN----VIIVAGGTGVAPVRSLINKFYDEPNYVET 132
Query: 199 VRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNP 258
+ L +G +N + + +++ W I + + W ETG V ++
Sbjct: 133 LSLVFGFKNSEGILFKNDLDRWNEKFNTIYTLDNDTKEGW--ETGLVTVHLNKLPLESFG 190
Query: 259 QGTGVVLCGQKQMAEEVTSIVLAEGVSSEKILKNF 293
V++ G M L GV +KI +F
Sbjct: 191 DNYEVIIVGPPVMMHFTALEFLKLGVPEDKIWVSF 225
>gi|91794408|ref|YP_564059.1| FMN reductase [Shewanella denitrificans OS217]
gi|91716410|gb|ABE56336.1| oxidoreductase FAD/NAD(P)-binding [Shewanella denitrificans OS217]
Length = 232
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
+ +I+P ++++ V + P+ A +AGQYL + + + K F +IAS P +
Sbjct: 8 VEKITPFNDAVYQVLL----RPE-AGFEFKAGQYLSVVMAENDKRPF-SIASAPGLDT-- 59
Query: 121 GAFEFLVKSVAGST--AEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E + + + +V+ LK ++I G F Q P L+ A G+
Sbjct: 60 --LELHIGAAVSESYPMQVVERLKNSTHIDIEAPAGDAFLRQESQRPR-----LMIAGGT 112
Query: 179 GISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLSQPDG 236
G S I+S+IES S + + Y+G RN M YQ +EW + ++ +PV+
Sbjct: 113 GFSYIKSIIESQISLGQTVHTQFYWGCRNQDAMYYQGIAREWHKAHTWLEFIPVVEDAPQ 172
Query: 237 NWSGETG 243
W G+ G
Sbjct: 173 GWQGKQG 179
>gi|359437693|ref|ZP_09227748.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20311]
gi|359445295|ref|ZP_09235039.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20439]
gi|392556261|ref|ZP_10303398.1| Na(+)-translocating NADH-quinone reductase subunit F
[Pseudoalteromonas undina NCIMB 2128]
gi|358027632|dbj|GAA63997.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20311]
gi|358040861|dbj|GAA71288.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Pseudoalteromonas sp. BSi20439]
Length = 407
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
G + + LK+GD V IS G FA D ++ G+G++P+RS I
Sbjct: 241 CGKMSSYIWSLKEGDKVTISGPFGEFFA------KDTDAEMVFVGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYV 245
+ + +YGAR+ + M Y + F V LS QP+ NW G TG++
Sbjct: 295 LKRLNSKRKISFWYGARSKREMFYVEDFDGLAEQNENFVWHTALSDPQPEDNWEGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 355 HNVLFENYLKDHEAPEDCEFYMCGPPMMNAAVITMLKDLGVEEENIL 401
>gi|333916098|ref|YP_004489830.1| ferredoxin--NAD(+) reductase [Delftia sp. Cs1-4]
gi|333746298|gb|AEF91475.1| Ferredoxin--NAD(+) reductase [Delftia sp. Cs1-4]
Length = 350
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + + ++A+ P + E ++ + G T V +K+ +++
Sbjct: 139 HAGQYVEFILRDGARRAY-SMATAPHLQDTAPGLELHIRHMPGGKFTDHVFGAMKEKEIL 197
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ G F + P V++ A+G+G +PI++L+E V LY+G R
Sbjct: 198 RVEGPFGSFFLREDSDKP-----VILLASGTGFAPIKALLEHIRHKDIHRSVTLYWGGRR 252
Query: 208 LKRMAYQDKFKEWESSG---VKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQGTG 262
+ + Y D + ++ + VPV+S P+ W+G TG+V A + G
Sbjct: 253 PEDL-YMDAWVREQAEAMPQLCYVPVVSDALPEDAWTGRTGFVHQAV--LDDFADLSGHQ 309
Query: 263 VVLCG 267
V CG
Sbjct: 310 VYACG 314
>gi|335044677|ref|ZP_08537702.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Methylophaga aminisulfidivorans MP]
gi|333787923|gb|EGL53807.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Methylophaga aminisulfidivorans MP]
Length = 405
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D + ++ G+G++P+RS I
Sbjct: 240 GQMSSYIFNLKPGDKVTISGPFGEFFAKDTDKE------MVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
K + +YGAR+L+ M Y + F E E+ LS P + NW G TG++
Sbjct: 294 RRIKTDRKISFWYGARSLREMFYTEDFDELAAENENFTWNVALSDPLPEDNWQGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I
Sbjct: 354 NVLYENYLKDHPAPEDCEFYMCGPPMMNAAVIRMLEDLGVERENIF 399
>gi|117921810|ref|YP_871002.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
sp. ANA-3]
gi|117614142|gb|ABK49596.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella sp. ANA-3]
Length = 405
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G F D ++ G+G++P+RS I
Sbjct: 240 GKMSSYIFNLKAGDKVTISGPFGEFFV------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
SK+ + + +YGAR+ + + YQ F + V LS+ P+ NW+G TG++
Sbjct: 294 KSKKTKRKMSFWYGARSTREVFYQQDFDALAAENDNFVWHVALSEPLPEDNWTGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 354 NVIYENYLKHHKAPEDCEYYMCGPPIMNSSVIRMLESLGVEPENIL 399
>gi|359454051|ref|ZP_09243346.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20495]
gi|358049002|dbj|GAA79595.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20495]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLGEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLRNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G + +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIEA----GLGISQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAA 248
+G + + + + W S + +PV+ P NW G TGYV A
Sbjct: 142 WGVKEESALYAHTEMQTWADSHKNFEFIPVVENPSANWQGHTGYVHKA 189
>gi|336248866|ref|YP_004592576.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
aerogenes KCTC 2190]
gi|444352991|ref|YP_007389135.1| Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
[Enterobacter aerogenes EA1509E]
gi|334734922|gb|AEG97297.1| Na(+)-translocating NADH-quinone reductase subunit F [Enterobacter
aerogenes KCTC 2190]
gi|443903821|emb|CCG31595.1| Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
[Enterobacter aerogenes EA1509E]
Length = 407
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHI--- 291
Query: 191 FSSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQ--PDGNWSGET 242
F +R + +YGAR+L+ M Y D+F++ E+ LS P+ NW+G T
Sbjct: 292 FDQLKRLHSTRKISFWYGARSLREMFYDDEFEQLARENPNFTFHVALSDPLPEDNWTGHT 351
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + + P+ +CG M V ++ GV E I+
Sbjct: 352 GFIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIM 401
>gi|323483085|ref|ZP_08088478.1| sulfite reductase [Clostridium symbiosum WAL-14163]
gi|323403625|gb|EGA95930.1| sulfite reductase [Clostridium symbiosum WAL-14163]
Length = 266
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSVAGSTAEVLCGLKKGDVVE 148
R GQ++QL + +G+ +P S + G +F ++ V T E+ LKKG +
Sbjct: 35 RHGQFMQLSLPKIGE-------APISISGFGDGYADFTIRKVGKVTDELF-NLKKGSNIF 86
Query: 149 ISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERS-DVRLYYGARN 207
I G G+ ++++ + V+I A G+G+SP++SLI +S + ++ L G +N
Sbjct: 87 IRGCYGNGWPTEQLKGKN----VVIIAGGTGVSPVKSLINQLYSEPGYAKEIYLILGFKN 142
Query: 208 LKRMAYQDKFKEWESSG-VKIVPVLSQPD 235
+ + + D+ ++W+ +G ++ L D
Sbjct: 143 SQSILFTDELEQWKQAGHFHVICTLDNED 171
>gi|198283116|ref|YP_002219437.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|198247637|gb|ACH83230.1| oxidoreductase FAD/NAD(P)-binding domain protein [Acidithiobacillus
ferrooxidans ATCC 53993]
Length = 330
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 30/254 (11%)
Query: 44 LAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVG 103
L A VR+DT W T + +++P A ++ + + P+ + R GQY R+ G
Sbjct: 90 LHAEVVRKDT--WK-TEITQLTPLAWNVLELRL----RPERPYPY-RTGQYA--RIAIPG 139
Query: 104 KPT---FLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVVEISQVMGRGFA 158
+P ++A+PP +G F ++ + G + + ++GD + + G FA
Sbjct: 140 RPDQWRSYSMATPPG---TTGELVFHIRELPGGIFSQWLFHTAQRGDALILGAAQGE-FA 195
Query: 159 VDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFK 218
+ PD +L A G+G++PI ++I+ + + L+YGAR + ++
Sbjct: 196 LS----PDNDRDMLCIAAGTGLAPIEAMIQESIALGRTRPIHLFYGARKRADFYHLEELT 251
Query: 219 EWESS--GVKIVPVLS-QPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEV 275
W + I LS + D +W+G + + + + V LCG M E
Sbjct: 252 RWSQQYPHITITSTLSDRQDASWTGAHRLLPTVAASG----HWKDHEVYLCGSPGMIEAA 307
Query: 276 TSIVLAEGVSSEKI 289
++L+ V + I
Sbjct: 308 IDLLLSHDVRHDHI 321
>gi|386312625|ref|YP_006008790.1| NADH:ubiquinone oxidoreductase subunit F [Shewanella putrefaciens
200]
gi|319425250|gb|ADV53324.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella putrefaciens
200]
Length = 405
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK GD V IS G F ++ D ++ G+G++P+RS I
Sbjct: 239 AGKMSSYIFNLKAGDKVTISGPFGEFF----VKETD--AEMVFIGGGAGMAPMRSHIFDQ 292
Query: 191 FSSKE-RSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYV 245
SK+ + + +YGAR+ + + YQ F + V LS+P + NW+G TG++
Sbjct: 293 LKSKKTKRKMSFWYGARSTREVFYQADFDALAAENDNFVWHVALSEPLPEDNWTGYTGFI 352
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 353 HNVIYENYLKNHKAPEDCEYYMCGPPIMNSSVIKMLESLGVEPENIL 399
>gi|357149112|ref|XP_003575004.1| PREDICTED: ferredoxin--NADP reductase, leaf isozyme,
chloroplastic-like [Brachypodium distachyon]
Length = 358
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D T+++ ATG+GI+P RS +
Sbjct: 172 VKGVCSNFLCDLKPGSEVKITGPVGK----EMLMPKDPNATIIMLATGTGIAPFRSFLWK 227
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKFKEWESSG---VKIVPVLSQPDGNWSG 240
F +E D + L+ G + Y+++F++ G ++ +S+ N +G
Sbjct: 228 MF-FEEHEDYKFNGLAWLFLGVPTSDTLLYKEEFEKMTEIGGDNFRLDFAVSREQTNAAG 286
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVL 280
E Y+Q + K ++ T V +CG + M + + I++
Sbjct: 287 EKMYIQTRMAEYKEELWEMLKKDNTYVYMCGLRGMEKGIDDIMI 330
>gi|238020981|ref|ZP_04601407.1| hypothetical protein GCWU000324_00878 [Kingella oralis ATCC 51147]
gi|237867961|gb|EEP68967.1| hypothetical protein GCWU000324_00878 [Kingella oralis ATCC 51147]
Length = 340
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 91 AGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG---STAEVLCGLKKGDVV 147
AGQY ++ G ++A+ PS +G EF V+ G S A LK GDV+
Sbjct: 132 AGQYAD--ILYKGTVRSYSLANAPS---DNGVMEFHVRLREGGVFSPALFSGSLKVGDVL 186
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+ +G F ++ + P + I ATG+G +PI+SL+ ++ V LY+GAR+
Sbjct: 187 RVRAPLG-AFTLNE---NSDKPLIFI-ATGTGFAPIKSLLHHLRDTQPSRSVHLYHGARD 241
Query: 208 LKRMAYQDKFKE--WESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVL 265
+ + +E ++ + PVLS+ D W G GY+ + + G V
Sbjct: 242 AAGLYDEAALRELLYQLPNARYTPVLSRADDAWQGARGYITEHV--LQDYADLSGYEVYA 299
Query: 266 CGQKQM 271
CG M
Sbjct: 300 CGSMDM 305
>gi|95928455|ref|ZP_01311203.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Desulfuromonas acetoxidans DSM 684]
gi|95135726|gb|EAT17377.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Desulfuromonas acetoxidans DSM 684]
Length = 410
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESG 190
G + + LK GD V IS G FA + ++ G+G++P+RS +++
Sbjct: 245 GQMSSYIFNLKPGDKVTISGPYGEFFARETDN------EMVFIGGGAGMAPMRSHILDQL 298
Query: 191 FSSKERSDVRLYYGARNLKRMAY-------QDKFKEWESSGVKIVPVLSQPDGNWSGETG 243
+ +YGAR+LK M Y Q+K+ + P+ P+ NW G G
Sbjct: 299 LRLNTDRKMTYFYGARSLKEMFYVEELNGLQEKYPNFSWHCALSDPM---PEDNWEGPVG 355
Query: 244 YVQAAFSR--AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
++ K P+ +CG MA VT++++ +GV E I+
Sbjct: 356 FIHNVMYDLYIKDHEAPEDCEYYMCGPPMMANAVTNMLMEQGVERENIM 404
>gi|319762126|ref|YP_004126063.1| oxidoreductase fad/nad(p)-binding domain-containing protein
[Alicycliphilus denitrificans BC]
gi|317116687|gb|ADU99175.1| oxidoreductase FAD/NAD(P)-binding domain protein [Alicycliphilus
denitrificans BC]
Length = 353
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 28/247 (11%)
Query: 30 PLLHLKPQRRRLATLAAAAVRQDTTVWTPTPLAEISPAAESLFHVSIDISDAPDIASSHT 89
PL + + R++ +A +R+ P ++ ++ A+ + V + + P S
Sbjct: 89 PLTDVVLESRQVTDESAYPIRK-----LPVRVSALTRASHDVMQVRLQL---PANDSFRY 140
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGS--TAEVLCGLKKGDVV 147
AGQY++ + D + + ++A+ P ++ E ++ + G T V +K+ +++
Sbjct: 141 HAGQYIEFILRDGARRAY-SMATAPHMQESAPGVELHIRHMPGGKFTTHVFGDMKEKEIL 199
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVR---LYYG 204
+ G F + P ++ A+G+G +PI++LIE + + VR LY+G
Sbjct: 200 RVEGPFGSFFLREDSDKP-----MVFLASGTGFAPIKALIE---HMQHKGIVRPATLYWG 251
Query: 205 ARNLKRMAYQDKFKEWESS--GVKIVPVLSQ--PDGNWSGETGYVQAAFSRAKKIFNPQG 260
R + + +E ++ ++ VPV+S P+ W+G TG+V A + I + G
Sbjct: 252 GRRPQDLYMDGWVRERLAAMPQLRYVPVVSDALPEDGWTGRTGFVHQAV--MEDIADLSG 309
Query: 261 TGVVLCG 267
V CG
Sbjct: 310 HQVYACG 316
>gi|167625094|ref|YP_001675388.1| Na(+)-translocating NADH-quinone reductase subunit F [Shewanella
halifaxensis HAW-EB4]
gi|167355116|gb|ABZ77729.1| NADH:ubiquinone oxidoreductase, subunit F [Shewanella halifaxensis
HAW-EB4]
Length = 415
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
G + + LK+GD V IS G FA E ++F G+G++P+RS I
Sbjct: 249 CGKMSSYIFSLKEGDKVTISGPFGEFFA-------KETDNEMVFVGGGAGMAPMRSHI-- 299
Query: 190 GFSSKERSDVR----LYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGE 241
F +R + +YGAR+ + M Y + F ++ + LS QP+ NW G+
Sbjct: 300 -FDQLKRLHTKRKMSFWYGARSKREMFYVEDFDGLAADNDNFQWHVALSDPQPEDNWDGK 358
Query: 242 TGYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
TG++ S K P+ +CG M V +++ GV E IL
Sbjct: 359 TGFIHNVLYESYLKDHEAPEDCEYYMCGPPMMNAAVIAMLKDLGVEDENIL 409
>gi|374288947|ref|YP_005036032.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteriovorax
marinus SJ]
gi|301167488|emb|CBW27071.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteriovorax
marinus SJ]
Length = 408
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESG 190
G + + K GD V IS G FA D + ++ G+G++P+RS L +
Sbjct: 243 GKMSSYIFNCKPGDKVTISGPFGEFFARDTKK------EMVFVGGGAGMAPMRSHLFDQL 296
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQ--PDGNWSGETGYVQ 246
K + +YGAR+ + M Y + F+ + E+ K LS P+ NW G TG++
Sbjct: 297 KRIKTDRKITFWYGARSKREMFYVEDFEMLQRENDNFKWHCALSDALPEDNWEGYTGFIH 356
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ LCG M + V ++L GV E I+
Sbjct: 357 QVLHDEYLKDHPAPEDCEYYLCGPPIMNKCVIDMLLDLGVEREDIM 402
>gi|414071109|ref|ZP_11407084.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. Bsw20308]
gi|410806497|gb|EKS12488.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. Bsw20308]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 19/168 (11%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPS-------FASASGAFEFLVKSVAGSTAEVLCGLK 142
AGQY+QL + + K F +IAS PS ASGA + ++S+ +
Sbjct: 32 EAGQYMQLVLGEKDKRAF-SIASRPSQCDAIELHIGASGADSYAMQSLE----HLQNAHT 86
Query: 143 KGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLY 202
G +V+I G + +++ E P +L+ A G+G S +S+ + K V Y
Sbjct: 87 TGQLVDIE----AGLGISQLRLQCERPIILL-AGGTGFSYAKSMADHLAEIKCDRPVLFY 141
Query: 203 YGARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAA 248
+G + + + + W S + +PV+ P NW G TGYV A
Sbjct: 142 WGVKEESALYAHTEMQTWADSHKNFEFIPVVENPSANWQGHTGYVHKA 189
>gi|359436247|ref|ZP_09226365.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20311]
gi|358029107|dbj|GAA62614.1| NAD(P)H-flavin reductase [Pseudoalteromonas sp. BSi20311]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLV-----KSVAGSTAEVL-CGLKK 143
AGQYLQL + + K F +IAS PS + A E + S A + E L C
Sbjct: 32 EAGQYLQLVLGEKDKRAF-SIASRPS---QTDALELHIGASNADSYAMQSLEHLRCAHND 87
Query: 144 GDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYY 203
V I G + +++ E P +L+ A G+G S +S+ E V Y+
Sbjct: 88 NKTVTIEA----GLGISQLRLQCERPIILL-AGGTGFSYAKSMAEHLAEINCERPVLFYW 142
Query: 204 GARNLKRMAYQDKFKEWESS--GVKIVPVLSQPDGNWSGETGYVQAA 248
G + + + + W S K +PV+ P +W+G TGYV A
Sbjct: 143 GVKEESALYAHTQMQAWADSRKNFKFIPVVEHPTDSWTGHTGYVHKA 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,560,659,031
Number of Sequences: 23463169
Number of extensions: 188826398
Number of successful extensions: 516104
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 6806
Number of HSP's that attempted gapping in prelim test: 512589
Number of HSP's gapped (non-prelim): 7219
length of query: 293
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 152
effective length of database: 9,050,888,538
effective search space: 1375735057776
effective search space used: 1375735057776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)