BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022710
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P43394|K502_ACTDE Fruit protein pKIWI502 OS=Actinidia deliciosa GN=pKIWI502 PE=2 SV=1
Length = 317
Score = 285 bits (728), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 203/301 (67%), Gaps = 15/301 (4%)
Query: 4 ALSPSPSLP-HAHVSQTFP---PMSILRRIPLLHLKPQRRRL----ATLAAAAVRQDTTV 55
+LS PSL H+ +S P P++ LR P L R L A L A+RQDT +
Sbjct: 14 SLSRHPSLTLHSSLSHAPPHHRPVAFLRH-PTLRYHHHGRLLSVASAILQDTAIRQDTYI 72
Query: 56 WTPTPLAEISPAA-ESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDV-----GKPTFLA 109
WTP P++ + PAA ESLF V +D+S +PD+ + GQY+Q+R+ + +P +
Sbjct: 73 WTPVPISRVLPAAAESLFKVIVDLSRSPDLVYNFVSPGQYVQIRIPEAIVNPPPRPAYFY 132
Query: 110 IASPPSFASASGAFEFLVKSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYP 169
IASPPS + FEFL++SV G+T+EVLC LK+GDVV+++Q++GRGF +++I PP++YP
Sbjct: 133 IASPPSLVKKNLEFEFLIRSVPGTTSEVLCSLKEGDVVDLTQIIGRGFDIEQILPPEDYP 192
Query: 170 TVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVP 229
TVLI TG G+S RS IE GF + +RSDVRLYYGA NL+ M YQ++FK+WE+SGV+++P
Sbjct: 193 TVLISVTGYGMSAGRSFIEEGFGANKRSDVRLYYGAENLETMGYQERFKDWEASGVRVIP 252
Query: 230 VLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKI 289
VLS+P NW+G GYVQ + + K I +P+ TG VL G M EE I++A+GVS EKI
Sbjct: 253 VLSRPPPNWNGAVGYVQDVYLKDKPIADPRTTGAVLIGNPNMVEETRGILVAQGVSREKI 312
Query: 290 L 290
L
Sbjct: 313 L 313
>sp|Q8U2E4|HYD1G_PYRFU Sulfhydrogenase 1 subunit gamma OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=hydG PE=1 SV=1
Length = 292
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 80 DAPDIASSHT-RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAGSTAEVL 138
+ P++A T + GQ++QL + VG+ +SP G FE ++ AG V+
Sbjct: 40 EDPELAEKWTFKPGQFVQLTIPGVGEVPISICSSP----MRKGFFELCIRK-AGRVTTVV 94
Query: 139 CGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER-S 197
LK GD V + G GF VD + D +L+ A G G +P+RS+ ++ +
Sbjct: 95 HRLKPGDTVLVRGPYGNGFPVDEWEGMD----LLLIAAGLGTAPLRSVFLYAMDNRWKYG 150
Query: 198 DVRLYYGARNLKRMAYQDKFKEW----ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAK 253
++ AR K + + + + E+ VKI+ +++ D NW G G Q A
Sbjct: 151 NITFINTARYGKDLLFYKELEAMKDLAEAENVKIIQSVTR-DPNWPGLKGRPQQFIVEAN 209
Query: 254 KIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
NP+ T V +CG +M + V ++ G E I
Sbjct: 210 T--NPKNTAVAICGPPRMYKSVFEALINYGYRPENIF 244
>sp|Q5QYQ8|NQRF_IDILO Na(+)-translocating NADH-quinone reductase subunit F OS=Idiomarina
loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
GN=nqrF PE=3 SV=1
Length = 408
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIES 189
AG + + LK GD V IS G FA D ++ G+G++P+RS L +
Sbjct: 242 AGKMSSYIFSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHLFDQ 295
Query: 190 GFSSKERSDVRLYYGARNLKRMAYQDKF----KEWESSGVKIVPVLSQPDGNWSGETGYV 245
K V +YGAR+ K M Y + F +E E+ + QP+ NW G+TG++
Sbjct: 296 MRRIKTDRKVSFWYGARSKKEMFYVEDFDMLAEENENFDWHVALSDPQPEDNWEGDTGFI 355
Query: 246 QAA-FSRAKKIFN-PQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ R K + P+ +CG M V +++ GV E I+
Sbjct: 356 HNVLYERYLKDHDAPEDCEFYMCGPPVMNAAVINLLKDLGVEDENIM 402
>sp|A8GAC4|NQRF_SERP5 Na(+)-translocating NADH-quinone reductase subunit F OS=Serratia
proteamaculans (strain 568) GN=nqrF PE=3 SV=1
Length = 407
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKAGDKVTISGPFGEFFA------KDTDAEMIFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ K + + +YGAR+L+ M Y++ F + ++ ++ QP+ NW+G TG++
Sbjct: 296 NRLKSKRKITFWYGARSLREMFYEEDFNQLQAENENFTWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLRNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q15YQ1|NQRF_PSEA6 Na(+)-translocating NADH-quinone reductase subunit F
OS=Pseudoalteromonas atlantica (strain T6c / ATCC
BAA-1087) GN=nqrF PE=3 SV=1
Length = 408
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESG 190
AG + + LK+GD IS G FA + D ++ G+G++P+RS I
Sbjct: 242 AGKMSSYIWSLKEGDKATISGPFGEFFA----KKTD--AEMVFIGGGAGMAPMRSHIFDQ 295
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYV 245
K + +YGAR+L+ M Y + F + E+ K LS QP+ NW G TG++
Sbjct: 296 LRRLKTDRKISFWYGARSLREMFYVEDFDMLQKENDNFKWHVALSDPQPEDNWEGMTGFI 355
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V S++ GV E I+
Sbjct: 356 HQVLLENYLKDHPAPEDCEFYMCGPPMMNAAVISMLKDLGVEDENIM 402
>sp|A1JNZ2|NQRF_YERE8 Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=nqrF PE=3 SV=1
Length = 407
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 S---SKERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
SK R + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG+
Sbjct: 296 KRLHSKRR--ISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGF 353
Query: 245 VQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + K P+ +CG M V ++ GV E I+
Sbjct: 354 IHNVLLENYLKNHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q66DP5|ASCD_YERPS CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=ascD PE=1 SV=3
Length = 329
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFVGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>sp|A5DQE4|MCR1_PICGU NADH-cytochrome b5 reductase 2 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=MCR1 PE=3 SV=2
Length = 294
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 112 SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S G +F++K G + GLK+GD V +G V P+++ +
Sbjct: 101 TPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSF-----KGPIVKWKWEPNQFQS 155
Query: 171 VLIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVK 226
+ + G+GI+P+ L+ E + ++++ V+L+YG + + + D E V
Sbjct: 156 IALIGGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDILIKKELDDIAEKHKDQVS 215
Query: 227 IVPVLSQPDGNWSGETGYVQAAF--------SRAKKIF--NPQGTGVVLCGQK---QMAE 273
I + + NW GETG++ F S+ K+F P G L G K
Sbjct: 216 ITYFVDKASANWKGETGHIDKEFLQSNLPGPSKDSKVFVCGPPGLYKALSGVKVSPTDQG 275
Query: 274 EVTSIVLAEGVSSEKILK 291
EVT ++ G + E + K
Sbjct: 276 EVTGVLAELGYTKENVYK 293
>sp|Q7WTJ2|DMPP_ACICP Phenol hydroxylase P5 protein OS=Acinetobacter calcoaceticus
(strain PHEA-2) GN=mphP PE=1 SV=3
Length = 353
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 19/199 (9%)
Query: 90 RAGQYLQLRVVDVGKPTFLAIASPPSFASASGAFEFLVKSVAG--STAEVLCGLKKGDVV 147
+AGQY+ ++ ++ +IA+ PS G E ++ V G +T V L GD +
Sbjct: 133 QAGQYINVQFPNIEGTRAFSIANSPS---EVGIVELHIRKVEGGAATTYVHEQLATGDQL 189
Query: 148 EISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKERSDVRLYYGARN 207
+IS G+ F ++ D+ + I A GSG+S +S+I S + + L+ GAR+
Sbjct: 190 DISGPYGQFF----VRKSDDQNAIFI-AGGSGLSSPQSMILDLLESGDSRTIYLFQGARD 244
Query: 208 LKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQAAFSRAKKIFNPQ--GT 261
L + ++ F++ + + +P L+ +P+ W+G TG+V A + F + G
Sbjct: 245 LAELYNRELFEQLVKDYPNFRYIPALNAPKPEDQWTGFTGFVHEAVA---DYFENRCGGH 301
Query: 262 GVVLCGQKQMAEEVTSIVL 280
LCG M + S ++
Sbjct: 302 KAYLCGPPIMIDSAISTLM 320
>sp|Q66E01|NQRF_YERPS Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=nqrF
PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q6BQ54|MCR1_DEBHA NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MCR1 PE=3 SV=1
Length = 299
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 112 SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPT 170
+P S G+ EF++K G + + LK D + +G V P++Y +
Sbjct: 106 TPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAF-----KGPVVKWKWEPNQYKS 160
Query: 171 VLIFATGSGISPIRSLI-ESGFSSKERSDVRLYYGARNLKRMAYQ---DKFKEWESSGVK 226
+ + G+GI+P+ L+ E + ++++ V L+YG K + + D E V
Sbjct: 161 IALIGGGTGITPLYQLMHEITKNPEDKTKVNLFYGNLTEKDILIKKELDTIAEKHKDQVN 220
Query: 227 IVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCG 267
+V L + NW+GETGY+ F ++K + V +CG
Sbjct: 221 VVYFLDKAPENWNGETGYISKEFLQSKLPGPGKDNKVFVCG 261
>sp|A4TPL2|NQRF_YERPP Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pestis (strain Pestoides F) GN=nqrF PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q1CLD8|NQRF_YERPN Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pestis bv. Antiqua (strain Nepal516) GN=nqrF PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q8ZBZ5|NQRF_YERPE Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pestis GN=nqrF PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|Q1C4D5|NQRF_YERPA Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pestis bv. Antiqua (strain Antiqua) GN=nqrF PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|A7FLJ3|NQRF_YERP3 Na(+)-translocating NADH-quinone reductase subunit F OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=nqrF PE=3 SV=1
Length = 407
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVVISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGYVQ 246
+ + +YGAR+ + M Y++ F + E+ + LS QP+ NW+G TG++
Sbjct: 296 KRLHSKRKISFWYGARSRREMFYEEDFDQLQAENDNFRWHVALSDPQPEDNWTGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E I+
Sbjct: 356 NVLLENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLKDLGVEDENIM 401
>sp|P68641|ASCD_YERPE CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
OS=Yersinia pestis GN=ascD PE=3 SV=2
Length = 329
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 58 PTPLAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFA 117
P L I E + +S+ + P A AGQY+ L + G+ +IA+ P
Sbjct: 102 PCKLDSIEFIGEDIAILSLRL---PPTAKIQYLAGQYIDLIIN--GQRRSYSIANAPG-- 154
Query: 118 SASGAFEFLVKSVAGSTAE--VLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+G E V+ V + LK ++ I G F + D P V + A
Sbjct: 155 -GNGNIELHVRKVVNGVFSNIIFNELKLQQLLRIEGPQGTFFVRE-----DNLPIVFL-A 207
Query: 176 TGSGISPIRSLIESGFSSKERSDVRLYYG---ARNLKRMAYQDKFKEW--ESSGVKIVPV 230
G+G +P++S++E+ + ++ V +Y+G N Y D EW + + VPV
Sbjct: 208 GGTGFAPVKSMVEALINKNDQRQVHIYWGMPAGHNF----YSDIANEWAIKHPNIHYVPV 263
Query: 231 LSQPDGNWSGETGYVQAAFSR---AKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSE 287
+S D W+G TG+V A +FN V CG M + + G++
Sbjct: 264 VSGDDSTWTGATGFVHQAVLEDIPDLSLFN-----VYACGSLAMITAARNDFINHGLAEN 318
Query: 288 KILKN 292
K +
Sbjct: 319 KFFSD 323
>sp|P19734|DMPP_PSEUF Phenol hydroxylase P5 protein OS=Pseudomonas sp. (strain CF600)
GN=dmpP PE=1 SV=3
Length = 353
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 61 LAEISPAAESLFHVSIDISDAPDIASSHTRAGQYLQLRVVDVGKPTFLAIASPPSFASAS 120
L ++SP + L H+ +D +AGQY+ L + + ++A+PPS +
Sbjct: 112 LVDLSPTIKGL-HIKLD-------RPMPFQAGQYVNLALPGIDGTRAFSLANPPS---RN 160
Query: 121 GAFEFLVKSVAG--STAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGS 178
E V+ V G +T + LK GD VE+S G+ F D Q D ++ A GS
Sbjct: 161 DEVELHVRLVEGGAATGFIHKQLKVGDAVELSGPYGQFFVRDS-QAGD----LIFIAGGS 215
Query: 179 GISPIRSLIESGFSSKERSDVR---LYYGARNLKRMAYQDKFKEWESS--GVKIVPVLSQ 233
G+S +S+I ER D R L+ GARN + + F+E + VP L+Q
Sbjct: 216 GLSSPQSMI---LDLLERGDTRRITLFQGARNRAELYNCELFEELAARHPNFSYVPALNQ 272
Query: 234 --PDGNWSGETGYVQAAFSRAKKIFNPQ--GTGVVLCGQKQMAEEVTSIVL 280
D W G G+V A AK F+ + G LCG M + + ++
Sbjct: 273 ANDDPEWQGFKGFVHDA---AKAHFDGRFGGQKAYLCGPPPMIDAAITTLM 320
>sp|Q7VNU4|NQRF_HAEDU Na(+)-translocating NADH-quinone reductase subunit F OS=Haemophilus
ducreyi (strain 35000HP / ATCC 700724) GN=nqrF PE=3 SV=1
Length = 409
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDNEMVFIGGGAGMAPMRSHIFDQ 296
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYV 245
K + + +YGAR+ + M Y + F + E+ K LS P + NW G TG++
Sbjct: 297 LKRLKSKRKMSFWYGARSKREMFYVEDFDQLQAENDNFKWHVALSDPLPEDNWDGYTGFI 356
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 357 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGMLKSLGVEDENIL 403
>sp|Q9X4Q8|NQRF_VIBCH Na(+)-translocating NADH-quinone reductase subunit F OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=nqrF PE=3 SV=1
Length = 408
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD IS G FA D ++ G+G++P+RS I
Sbjct: 243 GQMSSYIWSLKAGDKCTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 296
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + V LS QP+ NW+G TG++
Sbjct: 297 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIH 356
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 357 NVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENIL 402
>sp|A5F5Y4|NQRF_VIBC3 Na(+)-translocating NADH-quinone reductase subunit F OS=Vibrio
cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
O395) GN=nqrF PE=3 SV=1
Length = 408
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD IS G FA D ++ G+G++P+RS I
Sbjct: 243 GQMSSYIWSLKAGDKCTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 296
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + V LS QP+ NW+G TG++
Sbjct: 297 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIH 356
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ GV E IL
Sbjct: 357 NVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENIL 402
>sp|Q4FPV2|NQRF_PSYA2 Na(+)-translocating NADH-quinone reductase subunit F
OS=Psychrobacter arcticus (strain DSM 17307 / 273-4)
GN=nqrF PE=3 SV=1
Length = 411
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSD- 198
LK GD V +S G FA + +IF G+G++P+RS I F +R +
Sbjct: 255 LKPGDKVTVSGPYGEFFA-------KKTEAEMIFVGGGAGMAPMRSHI---FDQLKRLNS 304
Query: 199 ---VRLYYGARNLKRMAYQDKFKEWES--SGVKIVPVLS--QPDGNWSGETGYVQAAF-- 249
+ +YGAR+++ M Y + + + E+ + + LS QP+ NW+G TG++
Sbjct: 305 DRKISFWYGARSIREMFYVEDYDQLEADFANFQWHVALSDPQPEDNWTGYTGFIHNVLLE 364
Query: 250 SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M V ++ + GV E I+
Sbjct: 365 EYLKGHPNPEDCEYYMCGPPMMNAAVIDMLHSLGVEDENIM 405
>sp|A3MYM7|NQRF_ACTP2 Na(+)-translocating NADH-quinone reductase subunit F
OS=Actinobacillus pleuropneumoniae serotype 5b (strain
L20) GN=nqrF PE=3 SV=1
Length = 409
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKPGDKVTISGPFGEFFA-------KETDNEMVFIGGGAGMAPMRSHIFDQ 296
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYV 245
K + + +YGAR+ + + YQ+ F + + V LS P+ NW+G TG++
Sbjct: 297 LKRLKSKRKMSFWYGARSKREIFYQEDFDQLAAENDNFVWHVALSDALPEDNWTGYTGFI 356
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ + GV E IL
Sbjct: 357 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGMLKSLGVEDENIL 403
>sp|A7TNL7|NCB5R_VANPO NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1
Length = 285
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
Query: 117 ASASGAFEFLVKSVA-GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFA 175
+ A G FE L+KS G +++ LK GD +++ G DR + + A
Sbjct: 102 SEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDR-----SSKHLAMIA 156
Query: 176 TGSGISPIRSLIES-GFSSKERSDVRLYYGARNLKRMAYQDKFKEWESSG---VKIVPVL 231
GSG++P+ +I+S + K+++ V YG + +D ++ +S + I +L
Sbjct: 157 GGSGLTPMYQIIKSIAENPKDKTKVTFIYGNVEEIDILLRDDLDKFAASKPGQITIHYLL 216
Query: 232 SQPDGNWSGETGYVQAAFSRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEK 288
+P NW G +GYV + K G +++CG M + +A G K
Sbjct: 217 DKPSENWKGGSGYVTPELMKEKLPAPADGVQLLVCGPLPMVSAIKRSAVALGFPKAK 273
>sp|Q605A0|NQRF_METCA Na(+)-translocating NADH-quinone reductase subunit F
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=nqrF PE=3 SV=1
Length = 407
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRS-LIESG 190
G + + LK GD V IS G FA D + ++ G+G++P+RS + +
Sbjct: 242 GVMSSYIFNLKPGDKVTISGPFGEFFARDTDK------EMVFIGGGAGMAPMRSHIFDQL 295
Query: 191 FSSKERSDVRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLS--QPDGNWSGETGYVQ 246
K + + +YGAR+L+ Y ++F + E+ K LS +P+ W+G TG++
Sbjct: 296 LRLKSKRKMTFWYGARSLREAFYVEEFDRLQAENPNFKWFLGLSDPKPEDGWTGYTGFIH 355
Query: 247 AAFSRA--KKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K P+ +CG M V ++L GV E I+
Sbjct: 356 NILYEQYLKNHPAPEDCEYYMCGPPMMNSAVIQMLLDIGVDRENIM 401
>sp|Q8W493|FNRL2_ARATH Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic
OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1
Length = 369
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 128 KSVAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLI 187
++V G + LC L G V+++ +G+ + + P D TV++ ATG+GI+P RS +
Sbjct: 181 ETVKGVCSNFLCDLAPGSDVKLTGPVGK----EMLMPKDPNATVIMLATGTGIAPFRSFL 236
Query: 188 ESGFSSKERSDVR------LYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDGNW 238
F K D + L+ G + YQ++F + ++ ++ +S+ N
Sbjct: 237 WKMFFEK-HDDYKFNGLAWLFLGVPTTSSLLYQEEFDKMKAKAPENFRVDYAISREQAND 295
Query: 239 SGETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
GE Y+Q ++ ++ T V +CG K M + + I+++
Sbjct: 296 KGEKMYIQTRMAQYAAELWELLKKDNTFVYMCGLKGMEKGIDDIMVS 342
>sp|Q02PF8|NQRF_PSEAB Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=nqrF PE=3 SV=1
Length = 407
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V + G FA D E V I G+G++P+RS I
Sbjct: 242 GQMSSWVFNLKPGDKVTVYGPFGEFFAKDT-----EAEMVFI-GGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + +YGAR+L+ Y +++ + ++ L+ QP+ NW+G TG++
Sbjct: 296 RRLKSNRKISFWYGARSLREAFYTEEYDQLQAENPNFQWHLALSDPQPEDNWTGLTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 356 NVLFENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLTDLGVERENIL 401
>sp|Q9CLA6|NQRF_PASMU Na(+)-translocating NADH-quinone reductase subunit F OS=Pasteurella
multocida (strain Pm70) GN=nqrF PE=3 SV=1
Length = 407
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDAEMVFVGGGAGMAPMRSHIFDQ 294
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYV 245
K + + +YGAR+ + M Y + F ++ V ++ QP NW G TG++
Sbjct: 295 LKRLKSKRKMSFWYGARSKREMFYVEDFDTLQAENDNFVWHVALSDPQPGDNWDGYTGFI 354
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 355 HNVLYENYLKDHEAPEDCEYYMCGPPIMNASVIKMLKDLGVEDENIL 401
>sp|Q9HZL1|NQRF_PSEAE Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=nqrF PE=3 SV=1
Length = 407
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V + G FA D E V I G+G++P+RS I
Sbjct: 242 GQMSSWVFNLKPGDKVTVYGPFGEFFAKDT-----EAEMVFI-GGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
K + +YGAR+L+ Y +++ + ++ L+ QP+ NW+G TG++
Sbjct: 296 RRLKSNRKISFWYGARSLREAFYTEEYDQLQAENPNFQWHLALSDPQPEDNWTGLTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 356 NVLFENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLTDLGVERENIL 401
>sp|Q65VU9|NQRF_MANSM Na(+)-translocating NADH-quinone reductase subunit F OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=nqrF PE=3 SV=1
Length = 409
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 297
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E+ LS P + NW G TG++
Sbjct: 298 KRLHSKRKISFWYGARSKREMFYVEDFDQLQAENDNFTWHVALSDPLPEDNWDGYTGFIH 357
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V +++ + GV E IL
Sbjct: 358 NVLYENYLKNHEAPEDCEYYMCGPPVMNAAVINMLESLGVEHENIL 403
>sp|A6T526|NQRF_KLEP7 Na(+)-translocating NADH-quinone reductase subunit F OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=nqrF PE=3 SV=1
Length = 407
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 242 GIMSSYIWSLKPGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHI--- 291
Query: 191 FSSKER----SDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGET 242
F +R + +YGAR+L+ M Y ++F++ ++ LS P + NW+G T
Sbjct: 292 FDQLKRLHSTRKISFWYGARSLREMFYDEEFEQLARDNPNFTFHVALSDPLPEDNWTGHT 351
Query: 243 GYVQAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
G++ + + P+ +CG M V ++ GV E IL
Sbjct: 352 GFIHNVLYENYLRDHPAPEDCEFYMCGPPVMNAAVIKMLKDLGVEDENIL 401
>sp|Q4QP19|NQRF_HAEI8 Na(+)-translocating NADH-quinone reductase subunit F OS=Haemophilus
influenzae (strain 86-028NP) GN=nqrF PE=3 SV=1
Length = 411
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA + ++ G+G++P+RS I
Sbjct: 246 GQMSSYIWSLKAGDKVTISGPFGEFFA------KETNAEMVFIGGGAGMAPMRSHIFDQL 299
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYVQ 246
+ + +YGAR+ + + YQ+ F + ++ V LS P+ NW+G TG++
Sbjct: 300 KRLHSKRKMSFWYGARSKREIFYQEDFDQLQAENPNFVWHVALSDALPEDNWTGYTGFIH 359
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 360 NVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIKMLKDLGVEDENIL 405
>sp|A5UFX3|NQRF_HAEIG Na(+)-translocating NADH-quinone reductase subunit F OS=Haemophilus
influenzae (strain PittGG) GN=nqrF PE=3 SV=1
Length = 411
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 246 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 298
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYV 245
+ + +YGAR+ + + YQ+ F + ++ V LS P+ NW+G TG++
Sbjct: 299 LKRLHSKRKMSFWYGARSKREIFYQEDFDQLQAENDNFVWHVALSDALPEDNWTGYTGFI 358
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 359 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIKMLKDLGVEDENIL 405
>sp|O05012|NQRF_HAEIN Na(+)-translocating NADH-quinone reductase subunit F OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=nqrF PE=3 SV=1
Length = 411
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 246 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 298
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYV 245
+ + +YGAR+ + + YQ+ F + ++ V LS P+ NW+G TG++
Sbjct: 299 LKRLHSKRKMSFWYGARSKREIFYQEDFDQLQAENPNFVWHVALSDALPEDNWTGYTGFI 358
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 359 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIKMLKDLGVEDENIL 405
>sp|P41344|FENR1_ORYSJ Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1
Length = 362
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 130 VAGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIES 189
V G + LC LK G V+I+ +G+ + + P D +++ ATG+GI+P RS +
Sbjct: 176 VKGVCSNFLCDLKPGSDVKITGPVGK----EMLMPKDPNANIIMLATGTGIAPFRSFLWK 231
Query: 190 GFSSKERSDVR------LYYGARNLKRMAYQDKFKEWES---SGVKIVPVLSQPDGNWSG 240
F K D + L+ G + Y+++F + ++ ++ +S+ N G
Sbjct: 232 MFFEK-YDDYKFNGLAWLFLGVPTSSSLLYKEEFDKMKAKAPENFRVDYAVSREQTNAQG 290
Query: 241 ETGYVQAAFSRAK----KIFNPQGTGVVLCGQKQMAEEVTSIVLA 281
E Y+Q + K ++ T V +CG K M + + I+++
Sbjct: 291 EKMYIQTRMAEYKEELWELLKKDHTYVYMCGLKGMEKGIDDIMVS 335
>sp|A5UAX6|NQRF_HAEIE Na(+)-translocating NADH-quinone reductase subunit F OS=Haemophilus
influenzae (strain PittEE) GN=nqrF PE=3 SV=1
Length = 411
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESG 190
G + + LK GD V IS G FA E ++F G+G++P+RS I
Sbjct: 246 GQMSSYIWSLKAGDKVTISGPFGEFFA-------KETDAEMVFIGGGAGMAPMRSHIFDQ 298
Query: 191 FSS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQ--PDGNWSGETGYV 245
+ + +YGAR+ + + YQ+ F + ++ V LS P+ NW+G TG++
Sbjct: 299 LKRLHSKRKMSFWYGARSKREIFYQEDFDQLQAENPNFVWHVALSDALPEDNWTGYTGFI 358
Query: 246 QAAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 359 HNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIKMLKDLGVEDENIL 405
>sp|Q0CY37|NCB5R_ASPTN NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=cbr1 PE=3 SV=1
Length = 296
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIA-SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
GQ++ L G+P + + +P S + +G F+ LVK+ G+ ++ L LK GD +++
Sbjct: 83 GQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKV 142
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER------SDVRLYY 203
RG + P+ + + A G+GI+P+ +I++ ++ R + + L +
Sbjct: 143 -----RGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTKIDLIF 197
Query: 204 GARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
N + + +D+ ++ E G +I VL+ P W+G G+V A + +
Sbjct: 198 ANVNEEDILLRDELEKLAKEDDGFRIFYVLNNPPPGWNGGFGFVTAEMIKEHLPAPAKDV 257
Query: 262 GVVLCGQKQM 271
++LCG M
Sbjct: 258 KILLCGPPPM 267
>sp|Q1Q7Z7|NQRF_PSYCK Na(+)-translocating NADH-quinone reductase subunit F
OS=Psychrobacter cryohalolentis (strain K5) GN=nqrF PE=3
SV=1
Length = 411
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 141 LKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIESGFSSKERSD- 198
LK GD V +S G FA + +IF G+G++P+RS I F +R +
Sbjct: 255 LKPGDKVTVSGPYGEFFA-------KKTEAEMIFVGGGAGMAPMRSHI---FDQLKRLNS 304
Query: 199 ---VRLYYGARNLKRMAYQDKFK--EWESSGVKIVPVLSQP--DGNWSGETGYVQAAF-- 249
+ +YGAR+++ M Y + + E E + + LS P + NW G TG++
Sbjct: 305 DRKISFWYGARSIREMFYVEDYDQLEEEFANFEWHVALSDPLPEDNWDGYTGFIHNVLLE 364
Query: 250 SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
K NP+ +CG M V ++ + GV E I+
Sbjct: 365 EYLKDHPNPEDCEYYMCGPPMMNAAVIDMLHSMGVEDENIM 405
>sp|A6V3A2|NQRF_PSEA7 Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain PA7) GN=nqrF PE=3 SV=1
Length = 407
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V + G FA D E V I G+G++P+RS I
Sbjct: 242 GQMSSWVFNLKPGDKVTVYGPFGEFFAKDT-----EAEMVFI-GGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIVPVLS----QPDGNWSGETGYVQ 246
+ + +YGAR+L+ Y +++ + ++ L+ QP+ NW+G TG++
Sbjct: 296 RRLRSTRKISFWYGARSLREAFYTEEYDQLQAENPNFQWHLALSDPQPEDNWTGLTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 356 NVLFENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLTDLGVERENIL 401
>sp|Q5F6X5|NQRF_NEIG1 Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=nqrF PE=3
SV=1
Length = 405
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E LS P + NW G TG++
Sbjct: 294 KRLHSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENIL 399
>sp|A1KSH3|NQRF_NEIMF Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria
meningitidis serogroup C / serotype 2a (strain ATCC
700532 / FAM18) GN=nqrF PE=3 SV=1
Length = 405
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E LS P + NW G TG++
Sbjct: 294 KRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENIL 399
>sp|Q9K0M8|NQRF_NEIMB Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria
meningitidis serogroup B (strain MC58) GN=nqrF PE=3 SV=1
Length = 405
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E LS P + NW G TG++
Sbjct: 294 KRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENIL 399
>sp|Q9JVQ3|NQRF_NEIMA Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=nqrF PE=3 SV=1
Length = 405
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E LS P + NW G TG++
Sbjct: 294 KRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENIL 399
>sp|A9M2A6|NQRF_NEIM0 Na(+)-translocating NADH-quinone reductase subunit F OS=Neisseria
meningitidis serogroup C (strain 053442) GN=nqrF PE=3
SV=1
Length = 405
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 240 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 293
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + E LS P + NW G TG++
Sbjct: 294 KRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHVALSDPLPEDNWDGYTGFIH 353
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M + V ++ GV E IL
Sbjct: 354 NVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLGVEDENIL 399
>sp|Q7MID2|NQRF_VIBVY Na(+)-translocating NADH-quinone reductase subunit F OS=Vibrio
vulnificus (strain YJ016) GN=nqrF PE=3 SV=1
Length = 407
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK+GD IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIWSLKEGDKCTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + V LS P + NW G TG++
Sbjct: 296 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPLPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E IL
Sbjct: 356 NVLYENYLRDHDAPEDCEYYMCGPPMMNAAVIGMLKNLGVEDENIL 401
>sp|Q8DBJ1|NQRF_VIBVU Na(+)-translocating NADH-quinone reductase subunit F OS=Vibrio
vulnificus (strain CMCP6) GN=nqrF PE=3 SV=1
Length = 407
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK+GD IS G FA D ++ G+G++P+RS I
Sbjct: 242 GQMSSYIWSLKEGDKCTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 295
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
K + + +YGAR+ + M Y + F + V LS P + NW G TG++
Sbjct: 296 KRLKSKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPLPEDNWDGYTGFIH 355
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ + P+ +CG M V ++ GV E IL
Sbjct: 356 NVLYENYLRDHDAPEDCEYYMCGPPMMNAAVIGMLKNLGVEDENIL 401
>sp|Q9LCJ3|NQRF_ALTMA Na(+)-translocating NADH-quinone reductase subunit F (Fragment)
OS=Alteromonas macleodii GN=nqrF PE=3 SV=1
Length = 303
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 131 AGSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIF-ATGSGISPIRSLIES 189
AG + + LK+GD IS G FA E ++F G+G++P+RS I
Sbjct: 170 AGKMSSYIWSLKEGDKATISGPFGEFFA-------KETENEMVFVGGGAGMAPMRSHIFD 222
Query: 190 GFSS-KERSDVRLYYGARNLKRMAYQDKFKEW--ESSGVKIVPVLS--QPDGNWSGETGY 244
K + + +YGAR+L+ M Y + F E E+ + LS QP+ NW G TG+
Sbjct: 223 QLRRLKSKRKMSFWYGARSLREMFYTEDFDELAAENDNFEWHVALSDPQPEDNWEGYTGF 282
Query: 245 VQ 246
+
Sbjct: 283 IH 284
>sp|Q75AL4|NCB5R_ASHGO NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CBR1
PE=3 SV=1
Length = 287
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 92 GQYLQLRVVDVGKPTFLAIASPPSFAS-ASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
GQ++ + V GK L +P S S A+G FE LVKS G+ +++L L GD +++
Sbjct: 77 GQHISISGVIDGK-EMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKV 135
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSS-KERSDVRLYYGARNL 208
RG P+ Y + + A G+GISP+ +I + FS+ ++++ V L YG +
Sbjct: 136 -----RGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAIFSNPRDKTRVCLVYGNQTK 190
Query: 209 KRMAYQ---DKFKEWESSGVKIVPVLSQ-PDG-NWSGETGYVQAAFSRAKKIFNPQGTGV 263
+ + D + KI+ +L + +G W G+ GY+ A R +
Sbjct: 191 DDILLKPELDAMVAAKPDQFKILYMLDKVAEGEQWEGKLGYITEAIMREHLPAPSSSAQL 250
Query: 264 VLCGQKQMAEEVTSIVLAEGVSSEK 288
+LCG M I ++ G K
Sbjct: 251 LLCGPPPMVSSAKRIAVSLGFEKAK 275
>sp|A6VLY1|NQRF_ACTSZ Na(+)-translocating NADH-quinone reductase subunit F
OS=Actinobacillus succinogenes (strain ATCC 55618 /
130Z) GN=nqrF PE=3 SV=1
Length = 409
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 13/166 (7%)
Query: 132 GSTAEVLCGLKKGDVVEISQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGF 191
G + + LK GD V IS G FA D ++ G+G++P+RS I
Sbjct: 244 GQMSSYIWSLKPGDKVTISGPFGEFFA------KDTDAEMVFIGGGAGMAPMRSHIFDQL 297
Query: 192 SS-KERSDVRLYYGARNLKRMAYQDKFKEWESSGVKIV--PVLSQP--DGNWSGETGYVQ 246
+ + +YGAR+ + M Y + F + ++ LS P + NW G TG++
Sbjct: 298 KRLHSKRKISFWYGARSKREMFYVEDFDQLQAENPNFTWHVALSDPLPEDNWDGYTGFIH 357
Query: 247 AAF--SRAKKIFNPQGTGVVLCGQKQMAEEVTSIVLAEGVSSEKIL 290
+ K P+ +CG M V ++ GV E IL
Sbjct: 358 NVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIKMLEDLGVEHENIL 403
>sp|Q5AZB4|NCB5R_EMENI NADH-cytochrome b5 reductase 1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cbr1
PE=3 SV=2
Length = 310
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 92 GQYLQLRVVDVGKPTFLAIA-SPPSFASASGAFEFLVKSV-AGSTAEVLCGLKKGDVVEI 149
GQ++ L G+P + + +P S + +G F+ LVK+ G+ ++ L LK GD +++
Sbjct: 97 GQHISLAATIEGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKV 156
Query: 150 SQVMGRGFAVDRIQPPDEYPTVLIFATGSGISPIRSLIESGFSSKER------SDVRLYY 203
RG + P+ + + A G+GI+P+ +I++ ++ R + V L +
Sbjct: 157 -----RGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIF 211
Query: 204 GARNLKRMAYQDKFKEW--ESSGVKIVPVLSQPDGNWSGETGYVQAAFSRAKKIFNPQGT 261
N + +D+ ++ E G +I VL+ P W+G G+V + +
Sbjct: 212 ANVNPDDILLKDELEKLAAEDDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPASDI 271
Query: 262 GVVLCGQKQM 271
++LCG M
Sbjct: 272 KILLCGPPPM 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,808,255
Number of Sequences: 539616
Number of extensions: 4401730
Number of successful extensions: 12170
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 12068
Number of HSP's gapped (non-prelim): 289
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)